Query psy254
Match_columns 187
No_of_seqs 158 out of 1053
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 18:47:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 4.8E-55 1.7E-59 396.5 21.6 185 2-186 29-213 (550)
2 3hqn_D Pyruvate kinase, PK; TI 100.0 7.2E-48 2.5E-52 346.8 18.9 159 17-185 2-162 (499)
3 1a3w_A Pyruvate kinase; allost 100.0 8.8E-48 3E-52 347.2 11.5 161 17-185 2-163 (500)
4 4drs_A Pyruvate kinase; glycol 100.0 3.4E-46 1.2E-50 337.9 17.6 158 18-186 28-186 (526)
5 3khd_A Pyruvate kinase; malari 100.0 7.1E-46 2.4E-50 334.7 14.6 146 30-186 41-187 (520)
6 3gg8_A Pyruvate kinase; malari 100.0 3.5E-45 1.2E-49 329.9 17.9 145 32-186 33-178 (511)
7 3t05_A Pyruvate kinase, PK; te 100.0 4.5E-45 1.6E-49 335.1 15.8 154 19-185 8-163 (606)
8 1e0t_A Pyruvate kinase, PK; ph 100.0 9.4E-45 3.2E-49 325.2 17.4 143 34-186 1-143 (470)
9 2e28_A Pyruvate kinase, PK; al 100.0 1E-43 3.4E-48 326.2 17.2 140 34-185 2-143 (587)
10 3qtg_A Pyruvate kinase, PK; TI 100.0 1.3E-43 4.3E-48 316.2 13.0 138 33-186 13-152 (461)
11 4fxs_A Inosine-5'-monophosphat 90.5 0.55 1.9E-05 41.9 6.9 51 36-86 219-269 (496)
12 2k8i_A SLYD, peptidyl-prolyl C 89.0 1.8 6.2E-05 33.2 7.9 60 126-185 52-117 (171)
13 4fo4_A Inosine 5'-monophosphat 88.2 1.1 3.8E-05 38.6 6.8 49 38-86 98-146 (366)
14 1at0_A 17-hedgehog; developmen 87.3 1.7 5.8E-05 32.2 6.6 25 156-180 88-116 (145)
15 1aj0_A DHPS, dihydropteroate s 86.9 2.9 0.0001 34.6 8.5 70 35-112 13-103 (282)
16 2kfw_A FKBP-type peptidyl-prol 86.7 0.83 2.8E-05 36.0 4.8 60 126-185 52-117 (196)
17 1eep_A Inosine 5'-monophosphat 86.5 1.2 4E-05 38.5 6.1 50 37-86 142-191 (404)
18 3usb_A Inosine-5'-monophosphat 86.5 1.2 4.2E-05 39.8 6.4 52 35-86 243-294 (511)
19 3khj_A Inosine-5-monophosphate 86.0 1.4 4.8E-05 37.7 6.2 46 39-86 98-143 (361)
20 3ndz_A Endoglucanase D; cellot 85.9 2.5 8.5E-05 35.5 7.7 59 44-110 39-107 (345)
21 1jcn_A Inosine monophosphate d 85.1 1.4 4.6E-05 39.3 5.9 49 38-86 245-293 (514)
22 1tvn_A Cellulase, endoglucanas 85.1 2.3 8E-05 34.4 6.9 53 48-108 39-101 (293)
23 4avf_A Inosine-5'-monophosphat 84.9 1.5 5.2E-05 39.0 6.1 51 36-86 217-267 (490)
24 3icg_A Endoglucanase D; cellul 84.7 2.8 9.7E-05 37.1 7.8 56 47-110 45-110 (515)
25 3cgm_A SLYD, peptidyl-prolyl C 84.0 4.1 0.00014 30.7 7.4 60 126-185 47-113 (158)
26 4af0_A Inosine-5'-monophosphat 83.5 1.1 3.7E-05 40.8 4.5 50 37-86 270-319 (556)
27 2kr7_A FKBP-type peptidyl-prol 83.3 5.7 0.00019 29.6 7.9 60 126-185 57-122 (151)
28 3l55_A B-1,4-endoglucanase/cel 83.3 3 0.0001 35.4 7.0 58 44-109 49-114 (353)
29 1egz_A Endoglucanase Z, EGZ, C 83.0 2.2 7.4E-05 34.5 5.9 53 48-108 39-99 (291)
30 1edg_A Endoglucanase A; family 82.8 3.7 0.00013 34.6 7.5 58 44-109 58-124 (380)
31 4dt4_A FKBP-type 16 kDa peptid 80.7 7.1 0.00024 29.8 7.7 61 126-186 75-142 (169)
32 3ayr_A Endoglucanase; TIM barr 79.6 5.9 0.0002 33.4 7.6 54 47-108 62-125 (376)
33 1vrd_A Inosine-5'-monophosphat 78.5 3.2 0.00011 36.6 5.7 48 39-86 228-275 (494)
34 1h1n_A Endo type cellulase ENG 78.1 3.7 0.00013 33.5 5.7 53 49-109 33-95 (305)
35 2vef_A Dihydropteroate synthas 77.9 8.9 0.0003 32.2 8.1 70 34-111 7-97 (314)
36 1ece_A Endocellulase E1; glyco 77.9 2.3 7.8E-05 35.2 4.4 52 50-109 47-118 (358)
37 2yci_X 5-methyltetrahydrofolat 77.4 3.6 0.00012 33.8 5.4 55 51-113 38-92 (271)
38 1tx2_A DHPS, dihydropteroate s 76.2 10 0.00036 31.5 8.0 71 35-113 38-129 (297)
39 3ffs_A Inosine-5-monophosphate 75.6 3.3 0.00011 36.0 4.9 44 41-86 139-182 (400)
40 2cks_A Endoglucanase E-5; carb 75.4 5.7 0.0002 32.3 6.2 53 48-108 43-102 (306)
41 2dpr_A CON-T(K7GLA); conantoxi 75.3 2.4 8.4E-05 21.9 2.4 18 73-90 2-19 (26)
42 1mdl_A Mandelate racemase; iso 74.8 9.5 0.00033 31.9 7.5 62 36-108 133-198 (359)
43 2whl_A Beta-mannanase, baman5; 74.4 4.2 0.00014 32.9 5.0 53 49-109 33-87 (294)
44 3nco_A Endoglucanase fncel5A; 74.2 10 0.00036 30.8 7.5 53 49-109 43-105 (320)
45 2jep_A Xyloglucanase; family 5 73.1 9.7 0.00033 32.0 7.2 54 48-109 70-133 (395)
46 1eye_A DHPS 1, dihydropteroate 72.8 9 0.00031 31.6 6.7 68 36-112 5-93 (280)
47 1ix5_A FKBP; ppiase, isomerase 72.7 4.3 0.00015 30.2 4.3 58 126-185 65-127 (151)
48 3aof_A Endoglucanase; glycosyl 72.1 8 0.00027 31.3 6.3 52 49-108 35-96 (317)
49 7a3h_A Endoglucanase; hydrolas 71.9 7 0.00024 31.9 5.9 54 47-108 43-102 (303)
50 3pr9_A FKBP-type peptidyl-prol 71.8 8 0.00027 29.1 5.7 58 126-185 64-126 (157)
51 1ceo_A Cellulase CELC; glycosy 71.6 9.1 0.00031 31.4 6.5 53 48-108 29-91 (343)
52 2ovl_A Putative racemase; stru 70.9 9.1 0.00031 32.3 6.5 64 36-108 133-200 (371)
53 2osx_A Endoglycoceramidase II; 70.8 7.4 0.00025 34.0 6.1 53 47-107 65-126 (481)
54 1w8s_A FBP aldolase, fructose- 70.6 13 0.00046 30.0 7.2 55 51-111 96-152 (263)
55 1rvk_A Isomerase/lactonizing e 70.3 15 0.0005 31.0 7.7 49 51-108 155-209 (382)
56 3r2g_A Inosine 5'-monophosphat 70.1 5 0.00017 34.4 4.7 46 41-86 93-138 (361)
57 3vup_A Beta-1,4-mannanase; TIM 69.4 6.4 0.00022 31.0 5.0 48 51-106 46-110 (351)
58 3n9k_A Glucan 1,3-beta-glucosi 69.0 5.6 0.00019 34.4 4.8 51 49-107 75-134 (399)
59 1ypf_A GMP reductase; GUAC, pu 68.8 5.5 0.00019 33.4 4.6 47 40-86 98-146 (336)
60 3pzt_A Endoglucanase; alpha/be 68.8 8.5 0.00029 31.9 5.8 55 47-109 68-128 (327)
61 1g01_A Endoglucanase; alpha/be 68.6 7 0.00024 32.8 5.2 54 48-109 54-113 (364)
62 1h4p_A Glucan 1,3-beta-glucosi 68.2 6 0.00021 34.0 4.8 52 49-108 75-136 (408)
63 2gdq_A YITF; mandelate racemas 67.8 21 0.00071 30.2 8.1 49 51-108 145-193 (382)
64 1nu5_A Chloromuconate cycloiso 67.7 16 0.00055 30.6 7.3 49 51-108 148-197 (370)
65 1tkk_A Similar to chloromucona 66.2 19 0.00066 30.0 7.6 49 51-108 146-194 (366)
66 3jug_A Beta-mannanase; TIM-bar 65.9 7.4 0.00025 32.9 4.9 51 51-109 58-110 (345)
67 1vjz_A Endoglucanase; TM1752, 65.8 11 0.00038 30.9 5.9 53 47-107 36-98 (341)
68 1tzz_A Hypothetical protein L1 64.8 17 0.00058 30.8 7.0 49 51-108 171-219 (392)
69 3kgk_A Arsenical resistance op 64.8 19 0.00064 25.7 6.1 46 44-91 19-69 (110)
70 2c0h_A Mannan endo-1,4-beta-ma 64.2 9.7 0.00033 31.1 5.2 49 50-106 48-111 (353)
71 3stp_A Galactonate dehydratase 63.9 16 0.00055 31.5 6.7 66 36-108 167-239 (412)
72 4hty_A Cellulase; (alpha/beta) 62.9 12 0.00042 31.2 5.7 55 47-109 85-144 (359)
73 1uuq_A Mannosyl-oligosaccharid 62.6 20 0.00069 30.7 7.1 49 51-107 66-132 (440)
74 1rh9_A Endo-beta-mannanase; en 61.9 24 0.00081 29.1 7.3 50 50-107 45-106 (373)
75 1vpz_A Carbon storage regulato 61.3 7.6 0.00026 25.8 3.2 29 156-185 14-42 (73)
76 2qdd_A Mandelate racemase/muco 60.5 21 0.00071 30.1 6.7 62 36-108 134-199 (378)
77 2bti_A Carbon storage regulato 60.4 8.4 0.00029 24.8 3.2 26 159-185 7-32 (63)
78 2oz8_A MLL7089 protein; struct 60.1 15 0.00051 31.2 5.8 64 36-108 132-199 (389)
79 1bqc_A Protein (beta-mannanase 59.7 9.4 0.00032 30.8 4.3 50 51-108 36-87 (302)
80 3prb_A FKBP-type peptidyl-prol 59.7 19 0.00065 28.9 6.0 58 126-185 64-126 (231)
81 3ktb_A Arsenical resistance op 59.4 17 0.00057 25.8 4.9 39 51-91 34-72 (106)
82 1wky_A Endo-beta-1,4-mannanase 59.2 10 0.00035 33.2 4.7 53 49-109 41-95 (464)
83 4dwd_A Mandelate racemase/muco 58.8 44 0.0015 28.4 8.6 64 36-108 125-200 (393)
84 2c6q_A GMP reductase 2; TIM ba 58.5 14 0.00048 31.2 5.3 48 39-86 109-158 (351)
85 4g9p_A 4-hydroxy-3-methylbut-2 58.5 21 0.00071 31.2 6.4 50 49-107 40-89 (406)
86 3qho_A Endoglucanase, 458AA lo 58.4 14 0.00047 32.4 5.4 51 50-108 87-156 (458)
87 2og9_A Mandelate racemase/muco 58.2 22 0.00076 30.1 6.6 64 36-108 148-216 (393)
88 3qr3_A Endoglucanase EG-II; TI 58.1 9.1 0.00031 32.2 4.0 54 49-110 45-108 (340)
89 2wg5_A General control protein 57.9 45 0.0015 23.3 8.3 21 158-178 73-94 (109)
90 2qjg_A Putative aldolase MJ040 57.8 33 0.0011 27.2 7.2 42 50-91 102-145 (273)
91 3pzg_A Mannan endo-1,4-beta-ma 57.8 22 0.00076 30.4 6.5 50 50-107 46-121 (383)
92 3m9b_A Proteasome-associated A 57.4 58 0.002 26.5 8.5 27 106-134 117-143 (251)
93 3noy_A 4-hydroxy-3-methylbut-2 57.3 22 0.00076 30.5 6.3 44 49-106 48-91 (366)
94 2jpp_A Translational repressor 57.0 10 0.00035 25.0 3.2 25 160-185 6-30 (70)
95 1xi3_A Thiamine phosphate pyro 56.9 41 0.0014 25.2 7.4 42 50-91 29-70 (215)
96 3if2_A Aminotransferase; YP_26 56.9 27 0.00092 29.1 6.8 52 38-90 367-440 (444)
97 2y5s_A DHPS, dihydropteroate s 55.8 18 0.00061 30.0 5.4 68 35-111 21-109 (294)
98 3sjn_A Mandelate racemase/muco 55.7 27 0.00093 29.4 6.7 51 49-108 150-202 (374)
99 3g0t_A Putative aminotransfera 55.5 21 0.00072 29.6 5.9 50 39-89 374-436 (437)
100 3nnk_A Ureidoglycine-glyoxylat 54.0 60 0.0021 26.3 8.4 52 39-91 325-391 (411)
101 3o63_A Probable thiamine-phosp 53.6 47 0.0016 26.5 7.4 42 50-91 46-96 (243)
102 3g7q_A Valine-pyruvate aminotr 52.8 36 0.0012 27.9 6.9 52 38-90 341-413 (417)
103 3h43_A Proteasome-activating n 52.8 49 0.0017 22.1 7.6 23 148-170 42-66 (85)
104 4awe_A Endo-beta-D-1,4-mannana 52.8 10 0.00034 30.1 3.3 17 50-66 40-56 (387)
105 4e2u_A PHO RADA intein; HINT-f 52.7 29 0.00099 25.9 5.7 16 156-171 110-125 (168)
106 3isl_A Purine catabolism prote 52.7 57 0.0019 26.5 8.1 44 48-91 334-391 (416)
107 3tr9_A Dihydropteroate synthas 51.9 16 0.00055 30.7 4.4 69 35-111 26-117 (314)
108 3k13_A 5-methyltetrahydrofolat 51.3 21 0.00071 29.7 5.1 54 51-112 41-97 (300)
109 2z0t_A Putative uncharacterize 50.9 15 0.0005 26.1 3.5 32 149-181 24-55 (109)
110 2dr1_A PH1308 protein, 386AA l 50.8 94 0.0032 24.8 9.2 44 48-91 325-380 (386)
111 2pp0_A L-talarate/galactarate 50.8 36 0.0012 28.9 6.6 64 36-108 161-229 (398)
112 1qnr_A Endo-1,4-B-D-mannanase; 49.5 18 0.00061 29.3 4.4 50 50-107 39-111 (344)
113 2r2n_A Kynurenine/alpha-aminoa 49.0 50 0.0017 27.5 7.2 51 39-89 356-423 (425)
114 3ele_A Amino transferase; RER0 48.5 38 0.0013 27.6 6.3 50 39-90 336-396 (398)
115 1grj_A GREA protein; transcrip 48.1 73 0.0025 23.6 7.3 36 146-181 117-156 (158)
116 2gl5_A Putative dehydratase pr 48.0 61 0.0021 27.4 7.7 52 51-108 156-227 (410)
117 1viz_A PCRB protein homolog; s 47.8 23 0.0008 28.4 4.7 48 38-85 9-59 (240)
118 2zad_A Muconate cycloisomerase 47.3 57 0.002 26.9 7.3 47 51-108 145-191 (345)
119 2poz_A Putative dehydratase; o 47.2 36 0.0012 28.7 6.1 52 51-108 143-208 (392)
120 3kgw_A Alanine-glyoxylate amin 46.9 73 0.0025 25.5 7.8 44 48-91 332-389 (393)
121 2dqw_A Dihydropteroate synthas 46.9 19 0.00066 29.9 4.2 68 35-111 27-115 (294)
122 2rdx_A Mandelate racemase/muco 46.5 33 0.0011 28.8 5.7 63 36-108 134-198 (379)
123 2nql_A AGR_PAT_674P, isomerase 46.2 37 0.0013 28.6 6.0 62 36-108 152-217 (388)
124 1xne_A Hypothetical protein PF 45.7 19 0.00063 25.8 3.4 24 157-181 32-55 (113)
125 16pk_A PGK, 3-phosphoglycerate 45.5 12 0.00041 32.8 2.8 98 50-171 40-162 (415)
126 1sfl_A 3-dehydroquinate dehydr 45.3 62 0.0021 25.6 6.9 72 35-112 124-202 (238)
127 2ox4_A Putative mandelate race 45.1 70 0.0024 26.9 7.6 52 51-108 152-218 (403)
128 2yr1_A 3-dehydroquinate dehydr 44.8 72 0.0025 25.5 7.3 74 34-113 137-217 (257)
129 4hvk_A Probable cysteine desul 44.6 96 0.0033 24.5 8.1 30 62-91 344-374 (382)
130 2o56_A Putative mandelate race 44.5 71 0.0024 26.9 7.6 52 51-108 158-224 (407)
131 4acy_A Endo-alpha-mannosidase; 44.5 32 0.0011 29.5 5.3 48 43-91 94-146 (382)
132 3nl6_A Thiamine biosynthetic b 44.2 46 0.0016 29.9 6.5 42 50-91 28-69 (540)
133 3aow_A Putative uncharacterize 43.9 43 0.0015 28.4 6.1 52 39-90 379-445 (448)
134 2vp8_A Dihydropteroate synthas 43.3 37 0.0013 28.5 5.4 70 35-111 40-129 (318)
135 3jtx_A Aminotransferase; NP_28 42.9 54 0.0018 26.6 6.4 46 39-86 329-394 (396)
136 3ozy_A Putative mandelate race 42.9 58 0.002 27.5 6.7 61 37-108 139-204 (389)
137 3gd6_A Muconate cycloisomerase 42.0 73 0.0025 26.9 7.2 62 37-108 128-196 (391)
138 2zyj_A Alpha-aminodipate amino 41.9 68 0.0023 26.1 6.9 51 39-89 327-392 (397)
139 4d9a_A 2-pyrone-4,6-dicarbaxyl 41.7 17 0.0006 29.6 3.1 35 36-71 96-130 (303)
140 2qgy_A Enolase from the enviro 41.5 56 0.0019 27.6 6.4 49 51-108 155-203 (391)
141 4hb7_A Dihydropteroate synthas 41.1 78 0.0027 25.9 6.9 70 34-112 4-94 (270)
142 4e4u_A Mandalate racemase/muco 40.8 94 0.0032 26.5 7.8 67 36-108 124-210 (412)
143 2p8b_A Mandelate racemase/muco 40.7 67 0.0023 26.6 6.7 48 51-108 147-194 (369)
144 1gvf_A Tagatose-bisphosphate a 40.7 80 0.0027 26.0 7.0 52 39-91 77-128 (286)
145 2jvf_A De novo protein M7; tet 40.4 78 0.0027 20.9 7.8 42 51-92 37-78 (96)
146 3ezs_A Aminotransferase ASPB; 40.3 41 0.0014 27.1 5.2 40 48-88 318-373 (376)
147 1t3o_A Carbon storage regulato 40.3 10 0.00036 26.4 1.3 30 155-185 22-51 (95)
148 1to3_A Putative aldolase YIHT; 40.2 75 0.0026 26.1 6.8 55 51-111 112-169 (304)
149 3i6e_A Muconate cycloisomerase 40.2 73 0.0025 26.8 6.9 62 37-108 138-201 (385)
150 4e5t_A Mandelate racemase / mu 40.0 98 0.0033 26.3 7.7 50 53-108 159-217 (404)
151 2in0_A Endonuclease PI-MTUI; h 39.9 33 0.0011 24.5 4.1 40 125-172 60-99 (139)
152 3h14_A Aminotransferase, class 39.9 61 0.0021 26.3 6.2 52 39-91 316-383 (391)
153 3ddy_A Lumazine protein, LUMP; 39.7 51 0.0017 25.5 5.3 36 148-185 23-59 (186)
154 2lcj_A PAB POLC intein; hydrol 39.7 23 0.0008 26.8 3.4 43 124-170 79-121 (185)
155 2qq6_A Mandelate racemase/muco 39.6 1.1E+02 0.0036 25.9 7.9 52 51-108 155-219 (410)
156 1me8_A Inosine-5'-monophosphat 39.3 50 0.0017 29.1 5.9 45 41-86 236-280 (503)
157 4h2h_A Mandelate racemase/muco 39.3 85 0.0029 26.3 7.2 65 36-108 139-205 (376)
158 2z9v_A Aspartate aminotransfer 39.2 1.5E+02 0.005 23.8 8.7 53 39-91 306-372 (392)
159 3ddm_A Putative mandelate race 38.8 58 0.002 27.6 6.1 62 36-108 146-208 (392)
160 1nvm_A HOA, 4-hydroxy-2-oxoval 38.5 74 0.0025 26.4 6.6 49 35-83 81-129 (345)
161 2y8k_A Arabinoxylanase, carboh 38.5 25 0.00084 30.8 3.7 60 41-108 33-102 (491)
162 1f6y_A 5-methyltetrahydrofolat 38.3 39 0.0013 27.3 4.7 53 51-114 29-84 (262)
163 1m32_A 2-aminoethylphosphonate 38.2 1E+02 0.0034 24.3 7.2 41 48-88 312-363 (366)
164 2f6u_A GGGPS, (S)-3-O-geranylg 38.0 76 0.0026 25.3 6.3 46 40-85 11-59 (234)
165 2tps_A Protein (thiamin phosph 37.9 64 0.0022 24.5 5.7 42 50-91 34-78 (227)
166 3q94_A Fructose-bisphosphate a 37.5 89 0.003 25.8 6.8 53 38-91 82-134 (288)
167 3zrp_A Serine-pyruvate aminotr 37.2 1.5E+02 0.0053 23.4 8.7 50 41-91 304-364 (384)
168 3toy_A Mandelate racemase/muco 36.8 83 0.0028 26.6 6.7 63 35-108 155-222 (383)
169 3dzz_A Putative pyridoxal 5'-p 36.8 60 0.0021 26.1 5.7 42 48-90 334-389 (391)
170 4h3d_A 3-dehydroquinate dehydr 36.4 1.4E+02 0.0047 23.8 7.7 75 34-113 137-218 (258)
171 2isw_A Putative fructose-1,6-b 36.2 87 0.003 26.3 6.6 53 38-91 77-129 (323)
172 2az4_A Hypothetical protein EF 36.2 30 0.001 29.2 3.9 34 51-84 362-396 (429)
173 2h9a_A Carbon monoxide dehydro 36.1 1.2E+02 0.004 26.6 7.7 66 33-111 88-166 (445)
174 2qgq_A Protein TM_1862; alpha- 36.1 47 0.0016 26.9 4.9 36 41-76 92-129 (304)
175 4h83_A Mandelate racemase/muco 36.1 1.7E+02 0.0059 24.5 8.7 64 37-109 152-219 (388)
176 2p4v_A Transcription elongatio 36.1 1.1E+02 0.0037 22.7 6.5 35 147-181 116-154 (158)
177 3tqx_A 2-amino-3-ketobutyrate 35.9 70 0.0024 25.8 6.0 44 48-91 339-397 (399)
178 3my9_A Muconate cycloisomerase 35.8 73 0.0025 26.7 6.2 63 37-108 136-200 (377)
179 3fdb_A Beta C-S lyase, putativ 35.7 57 0.002 26.2 5.4 47 41-88 314-374 (377)
180 3bjs_A Mandelate racemase/muco 35.4 92 0.0032 26.7 6.9 48 51-108 191-238 (428)
181 3tj4_A Mandelate racemase; eno 35.3 73 0.0025 26.7 6.1 63 37-108 138-206 (372)
182 3n9r_A Fructose-bisphosphate a 35.2 1.1E+02 0.0038 25.4 7.1 53 38-91 76-128 (307)
183 1zfj_A Inosine monophosphate d 35.1 67 0.0023 27.8 6.0 48 39-86 224-271 (491)
184 2jmz_A Hypothetical protein MJ 35.0 8.1 0.00028 29.5 0.0 16 156-171 117-132 (186)
185 3p3b_A Mandelate racemase/muco 35.0 47 0.0016 28.1 4.9 52 51-108 154-210 (392)
186 1r30_A Biotin synthase; SAM ra 34.7 1E+02 0.0034 25.5 6.9 31 38-70 149-179 (369)
187 3fvs_A Kynurenine--oxoglutarat 34.7 39 0.0013 27.8 4.2 26 62-88 395-420 (422)
188 3jva_A Dipeptide epimerase; en 34.1 92 0.0031 25.8 6.5 48 51-108 145-192 (354)
189 3i4k_A Muconate lactonizing en 34.0 78 0.0027 26.6 6.1 62 38-108 139-203 (383)
190 3rcy_A Mandelate racemase/muco 33.9 1.3E+02 0.0045 25.9 7.6 52 51-108 152-212 (433)
191 3eez_A Putative mandelate race 33.5 58 0.002 27.4 5.2 61 36-108 134-198 (378)
192 1rvg_A Fructose-1,6-bisphospha 33.4 1.2E+02 0.004 25.3 6.9 52 39-91 75-126 (305)
193 4e8g_A Enolase, mandelate race 33.3 1.2E+02 0.004 25.7 7.1 64 37-108 154-219 (391)
194 1zmr_A Phosphoglycerate kinase 33.2 41 0.0014 29.1 4.1 93 50-171 41-140 (387)
195 3ro6_B Putative chloromuconate 33.0 1.1E+02 0.0037 25.4 6.8 62 37-108 130-193 (356)
196 3cyj_A Mandelate racemase/muco 33.0 2.1E+02 0.0071 23.7 9.2 63 36-108 131-197 (372)
197 2x5f_A Aspartate_tyrosine_phen 32.7 86 0.003 25.9 6.1 50 39-89 371-428 (430)
198 2zc0_A Alanine glyoxylate tran 32.7 1.3E+02 0.0044 24.4 7.1 52 39-90 337-404 (407)
199 1kmj_A Selenocysteine lyase; p 32.7 89 0.003 25.1 6.1 41 49-89 344-404 (406)
200 1mi8_A DNAB intein; all beta-s 32.6 1.1E+02 0.0038 22.0 6.1 38 124-170 61-99 (158)
201 1iug_A Putative aspartate amin 32.6 1.5E+02 0.0051 23.2 7.4 43 48-90 294-348 (352)
202 3q3v_A Phosphoglycerate kinase 32.6 6.6 0.00023 34.3 -0.9 98 51-171 47-149 (403)
203 1i8d_A Riboflavin synthase; ri 32.5 69 0.0023 25.3 5.1 34 149-184 24-58 (213)
204 3mqt_A Mandelate racemase/muco 32.1 1.8E+02 0.0062 24.4 8.2 64 36-108 132-209 (394)
205 3rr1_A GALD, putative D-galact 32.0 1.2E+02 0.0041 25.8 7.0 66 36-108 114-187 (405)
206 2xhy_A BGLA, 6-phospho-beta-gl 31.8 1.2E+02 0.0042 26.6 7.2 21 50-70 74-94 (479)
207 1vpe_A Phosphoglycerate kinase 31.8 8.9 0.0003 33.4 -0.3 100 50-171 40-144 (398)
208 3hdo_A Histidinol-phosphate am 31.7 61 0.0021 26.0 4.9 49 39-90 296-355 (360)
209 4i6k_A Amidohydrolase family p 31.7 56 0.0019 26.1 4.6 61 38-105 97-158 (294)
210 1ydn_A Hydroxymethylglutaryl-C 31.7 2E+02 0.0068 23.0 9.5 52 36-91 72-133 (295)
211 1olt_A Oxygen-independent copr 31.6 2.1E+02 0.0071 24.5 8.6 39 37-75 140-178 (457)
212 1kzl_A Riboflavin synthase; bi 31.5 67 0.0023 25.3 4.8 34 149-184 25-58 (208)
213 4ad1_A Glycosyl hydrolase fami 31.3 1.2E+02 0.0041 25.8 6.8 54 43-103 95-154 (380)
214 4dxk_A Mandelate racemase / mu 31.2 1.4E+02 0.0047 25.3 7.3 53 50-108 157-219 (400)
215 1hjs_A Beta-1,4-galactanase; 4 31.2 31 0.001 28.7 3.0 48 51-108 31-82 (332)
216 3r4e_A Mandelate racemase/muco 31.1 1.1E+02 0.0036 26.2 6.5 67 36-108 132-229 (418)
217 3ugv_A Enolase; enzyme functio 31.1 96 0.0033 26.2 6.2 65 35-108 156-228 (390)
218 3q58_A N-acetylmannosamine-6-p 30.9 68 0.0023 25.2 4.9 37 49-85 90-127 (229)
219 1icp_A OPR1, 12-oxophytodienoa 30.7 1.3E+02 0.0046 25.3 7.0 20 53-72 173-192 (376)
220 3op7_A Aminotransferase class 30.6 87 0.003 25.1 5.7 51 40-91 310-372 (375)
221 3qgu_A LL-diaminopimelate amin 30.5 91 0.0031 25.9 5.9 50 39-90 377-440 (449)
222 3rq1_A Aminotransferase class 30.1 47 0.0016 27.3 4.0 43 49-91 368-416 (418)
223 1z41_A YQJM, probable NADH-dep 30.0 95 0.0032 25.6 5.9 19 53-71 150-168 (338)
224 3k8k_A Alpha-amylase, SUSG; al 29.9 70 0.0024 29.3 5.4 39 52-90 350-397 (669)
225 3gx1_A LIN1832 protein; APC633 29.6 82 0.0028 22.5 4.8 63 38-106 7-70 (130)
226 1wza_A Alpha-amylase A; hydrol 29.4 77 0.0026 27.3 5.4 22 51-72 181-202 (488)
227 2ozt_A TLR1174 protein; struct 29.4 1.2E+02 0.0041 24.9 6.4 52 49-109 120-171 (332)
228 3mcm_A 2-amino-4-hydroxy-6-hyd 29.4 1.3E+02 0.0043 26.5 6.7 74 35-111 189-281 (442)
229 2p10_A MLL9387 protein; putati 29.3 1.8E+02 0.0063 23.9 7.3 50 41-91 165-225 (286)
230 1php_A 3-phosphoglycerate kina 28.9 8 0.00027 33.7 -1.1 100 50-171 41-145 (394)
231 3mkc_A Racemase; metabolic pro 28.4 2.1E+02 0.0071 24.1 7.9 63 37-108 138-214 (394)
232 2j78_A Beta-glucosidase A; fam 28.1 34 0.0011 30.2 2.8 22 50-71 84-105 (468)
233 1vff_A Beta-glucosidase; glyco 28.0 1.5E+02 0.0052 25.5 7.0 22 50-71 53-74 (423)
234 2cun_A Phosphoglycerate kinase 27.9 18 0.00061 31.6 1.0 100 50-171 39-148 (410)
235 3dg3_A Muconate cycloisomerase 27.9 1.7E+02 0.0058 24.3 7.2 64 36-108 128-194 (367)
236 3fv9_G Mandelate racemase/muco 27.9 1.3E+02 0.0045 25.3 6.5 64 36-108 134-203 (386)
237 1ud2_A Amylase, alpha-amylase; 27.9 73 0.0025 27.4 4.9 35 51-85 214-250 (480)
238 1q7z_A 5-methyltetrahydrofolat 27.8 65 0.0022 29.0 4.7 51 51-112 344-397 (566)
239 3d6k_A Putative aminotransfera 27.6 70 0.0024 26.5 4.7 29 62-90 390-418 (422)
240 3tji_A Mandelate racemase/muco 27.6 2.1E+02 0.0071 24.4 7.8 52 51-108 160-231 (422)
241 3ik4_A Mandelate racemase/muco 27.4 1.1E+02 0.0037 25.5 5.9 61 38-108 134-196 (365)
242 3go2_A Putative L-alanine-DL-g 27.3 1.7E+02 0.0057 24.8 7.1 52 51-108 149-222 (409)
243 4ef8_A Dihydroorotate dehydrog 27.2 48 0.0016 28.1 3.6 66 15-86 111-191 (354)
244 2ps2_A Putative mandelate race 27.1 92 0.0032 25.8 5.3 63 36-108 135-199 (371)
245 2ocz_A 3-dehydroquinate dehydr 26.9 2.3E+02 0.0077 22.1 8.1 51 37-88 114-169 (231)
246 2huf_A Alanine glyoxylate amin 26.9 2.4E+02 0.0082 22.4 8.5 53 39-91 318-384 (393)
247 4hnl_A Mandelate racemase/muco 26.8 2.2E+02 0.0075 24.1 7.8 68 36-109 142-231 (421)
248 2cw6_A Hydroxymethylglutaryl-C 26.8 2.1E+02 0.0071 23.0 7.4 21 49-69 82-102 (298)
249 2yrr_A Aminotransferase, class 26.8 1.4E+02 0.0046 23.3 6.1 48 41-88 291-351 (353)
250 1mzh_A Deoxyribose-phosphate a 26.8 61 0.0021 25.3 3.9 50 37-86 54-114 (225)
251 3lfh_A Manxa, phosphotransfera 26.8 1.5E+02 0.005 21.5 5.8 63 39-108 7-72 (144)
252 1f6k_A N-acetylneuraminate lya 26.6 1.8E+02 0.0063 23.3 7.0 56 36-91 73-130 (293)
253 4dye_A Isomerase; enolase fami 26.6 1.6E+02 0.0055 24.9 6.8 46 52-108 175-221 (398)
254 4eb5_A Probable cysteine desul 26.5 2.4E+02 0.0081 22.3 8.2 30 62-91 344-374 (382)
255 2dou_A Probable N-succinyldiam 26.5 94 0.0032 25.0 5.2 47 39-86 315-374 (376)
256 3edf_A FSPCMD, cyclomaltodextr 26.4 86 0.003 28.0 5.3 36 51-86 294-331 (601)
257 2ehh_A DHDPS, dihydrodipicolin 26.3 1.7E+02 0.0058 23.6 6.7 56 36-91 69-126 (294)
258 1ur4_A Galactanase; hydrolase, 26.2 58 0.002 28.0 4.0 48 51-108 52-111 (399)
259 2yxg_A DHDPS, dihydrodipicolin 26.1 1.8E+02 0.0062 23.3 6.8 56 36-91 69-126 (289)
260 3igs_A N-acetylmannosamine-6-p 26.1 92 0.0032 24.4 4.9 37 49-85 90-127 (232)
261 4fey_A Phosphoglycerate kinase 26.0 99 0.0034 26.8 5.3 94 50-171 44-143 (395)
262 1rd5_A Tryptophan synthase alp 26.0 92 0.0031 24.5 4.9 23 49-71 34-56 (262)
263 2cay_A VPS36 PH domain, vacuol 25.8 1.3E+02 0.0044 22.1 5.3 50 31-91 90-140 (145)
264 3tak_A DHDPS, dihydrodipicolin 25.8 1.6E+02 0.0056 23.6 6.5 62 36-103 70-133 (291)
265 3l9c_A 3-dehydroquinate dehydr 25.8 2.6E+02 0.0088 22.4 8.5 71 36-112 144-220 (259)
266 3sbf_A Mandelate racemase / mu 25.7 2.4E+02 0.0082 23.7 7.8 67 36-108 122-210 (401)
267 1ep3_A Dihydroorotate dehydrog 25.6 87 0.003 25.0 4.8 50 37-86 99-162 (311)
268 1vky_A S-adenosylmethionine:tR 25.5 73 0.0025 27.1 4.3 24 158-182 111-134 (347)
269 3c2q_A Uncharacterized conserv 25.4 31 0.0011 29.3 2.0 51 36-86 135-214 (345)
270 2ftp_A Hydroxymethylglutaryl-C 25.4 2.7E+02 0.0091 22.4 8.9 53 35-91 75-137 (302)
271 2f9h_A PTS system, IIA compone 25.4 52 0.0018 23.9 3.0 32 149-182 43-75 (129)
272 1vyr_A Pentaerythritol tetrani 25.4 1.1E+02 0.0037 25.7 5.5 19 54-72 168-186 (364)
273 3v3w_A Starvation sensing prot 25.3 1.5E+02 0.0053 25.3 6.5 67 36-108 138-235 (424)
274 3bh4_A Alpha-amylase; calcium, 25.0 88 0.003 26.9 4.9 35 52-86 215-251 (483)
275 3dgb_A Muconate cycloisomerase 25.0 2.1E+02 0.0072 23.9 7.2 62 38-108 139-203 (382)
276 1pdo_A Mannose permease; phosp 24.9 1E+02 0.0035 21.8 4.6 64 39-109 5-70 (135)
277 3q45_A Mandelate racemase/muco 24.8 2.2E+02 0.0076 23.6 7.3 48 51-108 146-193 (368)
278 3d0c_A Dihydrodipicolinate syn 24.8 1.4E+02 0.0049 24.4 6.0 63 36-104 81-144 (314)
279 3gdw_A Sigma-54 interaction do 24.6 1.1E+02 0.0037 22.1 4.7 63 38-106 7-72 (139)
280 1g94_A Alpha-amylase; beta-alp 24.4 51 0.0017 28.2 3.3 34 51-84 158-192 (448)
281 3daq_A DHDPS, dihydrodipicolin 24.4 1.9E+02 0.0066 23.2 6.7 62 36-103 71-134 (292)
282 3pm6_A Putative fructose-bisph 24.3 1.9E+02 0.0066 24.0 6.7 53 38-91 84-144 (306)
283 3m5v_A DHDPS, dihydrodipicolin 24.2 2E+02 0.0069 23.2 6.8 65 36-107 77-143 (301)
284 3ipr_A PTS system, IIA compone 24.2 1.9E+02 0.0066 20.9 6.1 63 39-108 5-69 (150)
285 2qde_A Mandelate racemase/muco 24.1 1.4E+02 0.0048 25.0 6.0 61 36-108 134-198 (397)
286 3glc_A Aldolase LSRF; TIM barr 24.0 2.1E+02 0.0071 23.5 6.8 53 52-111 130-184 (295)
287 3zss_A Putative glucanohydrola 24.0 94 0.0032 28.7 5.1 36 51-86 398-434 (695)
288 3ly1_A Putative histidinol-pho 23.9 2.1E+02 0.0073 22.4 6.8 47 39-89 295-351 (354)
289 3bmv_A Cyclomaltodextrin gluca 23.7 94 0.0032 28.3 5.1 35 51-85 214-249 (683)
290 2vc6_A MOSA, dihydrodipicolina 23.5 1.5E+02 0.0052 23.8 5.9 56 36-91 69-126 (292)
291 3cpr_A Dihydrodipicolinate syn 23.5 2E+02 0.0069 23.3 6.7 56 36-91 85-142 (304)
292 3nx3_A Acoat, acetylornithine 23.4 1.7E+02 0.0059 23.6 6.3 41 48-88 345-393 (395)
293 3a9z_A Selenocysteine lyase; P 23.4 1.3E+02 0.0043 24.7 5.5 30 62-91 399-429 (432)
294 1yy3_A S-adenosylmethionine:tR 23.4 57 0.0019 27.8 3.2 25 158-182 104-128 (346)
295 3nra_A Aspartate aminotransfer 23.2 86 0.0029 25.4 4.3 41 49-90 351-405 (407)
296 3r0u_A Enzyme of enolase super 23.0 1.9E+02 0.0066 24.2 6.6 63 36-108 131-195 (379)
297 3bed_A PTS system, IIA compone 23.0 1.9E+02 0.0065 20.6 5.8 66 37-109 7-73 (142)
298 3piu_A 1-aminocyclopropane-1-c 23.0 1.1E+02 0.0036 25.4 5.0 41 50-90 378-432 (435)
299 1wpc_A Glucan 1,4-alpha-maltoh 23.0 1E+02 0.0035 26.5 4.9 36 51-86 219-256 (485)
300 3gr7_A NADPH dehydrogenase; fl 22.9 1.3E+02 0.0043 25.1 5.3 17 55-71 152-168 (340)
301 3qze_A DHDPS, dihydrodipicolin 22.9 1.9E+02 0.0064 23.7 6.4 62 36-103 92-155 (314)
302 3dip_A Enolase; structural gen 22.9 2.6E+02 0.0089 23.6 7.5 53 50-108 161-222 (410)
303 2fyf_A PSAT, phosphoserine ami 22.9 1.9E+02 0.0066 23.4 6.5 50 39-88 335-396 (398)
304 3bc9_A AMYB, alpha amylase, ca 22.8 93 0.0032 28.0 4.8 34 52-85 334-369 (599)
305 2ekc_A AQ_1548, tryptophan syn 22.8 1.9E+02 0.0065 22.9 6.2 31 42-72 24-56 (262)
306 3ffh_A Histidinol-phosphate am 22.7 1.6E+02 0.0056 23.3 5.9 44 39-86 308-362 (363)
307 1ps9_A 2,4-dienoyl-COA reducta 22.7 2.1E+02 0.0072 25.6 7.2 19 54-72 148-166 (671)
308 2r8w_A AGR_C_1641P; APC7498, d 22.6 2E+02 0.0067 23.8 6.5 56 36-91 103-160 (332)
309 1ydn_A Hydroxymethylglutaryl-C 22.5 1.3E+02 0.0043 24.2 5.2 36 51-86 159-196 (295)
310 3f9t_A TDC, L-tyrosine decarbo 22.4 1.4E+02 0.0047 23.7 5.4 39 49-87 348-395 (397)
311 1am2_A MXE GYRA intein; protei 22.4 73 0.0025 24.3 3.5 16 156-171 94-109 (199)
312 3hgj_A Chromate reductase; TIM 22.3 2.5E+02 0.0087 23.1 7.2 17 55-71 160-176 (349)
313 1ug6_A Beta-glycosidase; gluco 22.3 53 0.0018 28.5 3.0 22 50-71 60-81 (431)
314 1yaa_A Aspartate aminotransfer 22.3 64 0.0022 26.4 3.4 40 50-89 367-410 (412)
315 3a8u_X Omega-amino acid--pyruv 22.2 1.5E+02 0.0052 24.6 5.8 39 51-89 401-446 (449)
316 4aee_A Alpha amylase, catalyti 22.1 77 0.0026 28.9 4.2 35 51-85 426-461 (696)
317 1fob_A Beta-1,4-galactanase; B 22.1 1.2E+02 0.004 25.0 5.0 48 51-107 31-81 (334)
318 2z1k_A (NEO)pullulanase; hydro 22.1 1.1E+02 0.0037 26.1 4.9 35 51-85 186-222 (475)
319 3tj8_A Urease accessory protei 22.1 1.7E+02 0.0059 22.0 5.5 26 148-173 44-70 (170)
320 3lab_A Putative KDPG (2-keto-3 22.0 1.4E+02 0.0047 23.6 5.1 48 34-84 10-59 (217)
321 2plg_A TLL0839 protein; hypoth 22.0 2.6E+02 0.0087 21.0 7.4 50 40-90 80-145 (163)
322 3vnd_A TSA, tryptophan synthas 21.9 1.3E+02 0.0045 24.2 5.1 31 38-68 19-53 (267)
323 1xky_A Dihydrodipicolinate syn 21.9 1.8E+02 0.0063 23.5 6.1 69 36-114 81-151 (301)
324 1jg8_A L-ALLO-threonine aldola 21.7 2.9E+02 0.0098 21.5 7.2 51 39-89 286-345 (347)
325 2rfg_A Dihydrodipicolinate syn 21.7 1.7E+02 0.0058 23.7 5.8 56 36-91 69-126 (297)
326 2pgw_A Muconate cycloisomerase 21.7 1.4E+02 0.0047 24.9 5.4 59 37-108 137-199 (384)
327 3uep_A YSCQ-C, type III secret 21.6 1.4E+02 0.0049 20.2 4.5 67 98-181 19-85 (96)
328 3get_A Histidinol-phosphate am 21.6 1.5E+02 0.0052 23.5 5.5 45 39-86 309-363 (365)
329 2hxt_A L-fuconate dehydratase; 21.5 2.7E+02 0.0094 23.6 7.4 48 51-108 204-251 (441)
330 3e96_A Dihydrodipicolinate syn 21.5 2.2E+02 0.0074 23.3 6.5 62 36-103 81-143 (316)
331 4dq6_A Putative pyridoxal phos 21.5 1.2E+02 0.0041 24.2 4.9 38 48-86 338-389 (391)
332 3l21_A DHDPS, dihydrodipicolin 21.5 1.7E+02 0.0059 23.8 5.9 62 36-103 84-147 (304)
333 2e6f_A Dihydroorotate dehydrog 21.5 1.5E+02 0.0052 23.7 5.5 52 36-87 93-159 (314)
334 1gd9_A Aspartate aminotransfer 21.4 99 0.0034 24.9 4.4 41 49-90 332-386 (389)
335 3flu_A DHDPS, dihydrodipicolin 21.2 2.1E+02 0.0073 23.0 6.3 62 36-103 76-139 (297)
336 1yfb_A Transition state regula 21.1 95 0.0033 19.2 3.2 29 147-176 22-54 (59)
337 1f76_A Dihydroorotate dehydrog 21.1 3.3E+02 0.011 22.0 7.5 54 37-90 134-204 (336)
338 2b7n_A Probable nicotinate-nuc 21.0 2.6E+02 0.009 22.3 6.8 42 37-84 183-224 (273)
339 4a35_A Mitochondrial enolase s 21.0 2.3E+02 0.0077 24.4 6.8 48 51-108 207-254 (441)
340 2ln7_A LPXTG-SITE transpeptida 20.9 95 0.0032 22.5 3.7 24 157-180 73-98 (147)
341 3caw_A O-succinylbenzoate synt 20.7 3.3E+02 0.011 22.0 7.5 62 35-109 97-159 (330)
342 3w01_A Heptaprenylglyceryl pho 20.7 1.8E+02 0.006 23.2 5.5 46 40-85 15-62 (235)
343 1me8_A Inosine-5'-monophosphat 20.6 3.9E+02 0.013 23.2 8.3 24 48-71 293-316 (503)
344 2x5d_A Probable aminotransfera 20.6 1.2E+02 0.0043 24.7 4.9 42 49-91 344-399 (412)
345 1o5k_A DHDPS, dihydrodipicolin 20.5 1.8E+02 0.0061 23.7 5.7 69 36-114 81-151 (306)
346 3kw0_A Cysteine peptidase; str 20.4 45 0.0015 26.1 1.9 21 150-170 30-50 (214)
347 1qop_A Tryptophan synthase alp 20.4 2.2E+02 0.0077 22.4 6.2 35 38-72 18-56 (268)
348 2ch1_A 3-hydroxykynurenine tra 20.4 3.3E+02 0.011 21.6 9.0 54 38-91 317-384 (396)
349 2yx0_A Radical SAM enzyme; pre 20.4 3.4E+02 0.012 21.8 9.5 37 40-79 175-213 (342)
350 2dh2_A 4F2 cell-surface antige 20.3 1.3E+02 0.0043 25.6 5.0 41 50-91 125-165 (424)
351 3ble_A Citramalate synthase fr 20.3 3.6E+02 0.012 22.1 8.1 31 35-69 88-118 (337)
352 3ez1_A Aminotransferase MOCR f 20.2 1.2E+02 0.0041 24.8 4.7 30 62-91 387-416 (423)
353 2ord_A Acoat, acetylornithine 20.1 2.3E+02 0.0078 22.8 6.4 50 39-88 338-395 (397)
354 2hzg_A Mandelate racemase/muco 20.1 2.7E+02 0.0092 23.3 7.0 63 36-108 133-202 (401)
355 1vp4_A Aminotransferase, putat 20.0 1.3E+02 0.0046 24.7 5.0 53 39-91 352-419 (425)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=4.8e-55 Score=396.48 Aligned_cols=185 Identities=53% Similarity=0.861 Sum_probs=170.0
Q ss_pred CCCCCchhhhhhhhccHHHhhcCCCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHH
Q psy254 2 DGYVPPSQLRALAANTFVDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIK 81 (187)
Q Consensus 2 ~~~~~~~q~~~~~~~~~l~~~~~l~i~~~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~ 81 (187)
+.|+|+||+.+++++|+|+|+|.|++.++|..+|+|||||||||||+++++|++|+++||||||||||||++++|+++|+
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~ 108 (550)
T 3gr4_A 29 TAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 108 (550)
T ss_dssp ---CCSTTHHHHTCSSHHHHHHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHH
T ss_pred ccccchhhhcccccccHHHHhhccCCCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcceeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCC
Q psy254 82 NIRQAVENYSKRIGMPHALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVK 161 (187)
Q Consensus 82 ~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~ 161 (187)
+||+++++++++.+..+||+||+||+|||||||.++++...++.|++|++|+|+++..+...|+.+.++++|++|+++|+
T Consensus 109 ~iR~a~~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~ 188 (550)
T 3gr4_A 109 NVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVE 188 (550)
T ss_dssp HHHHHHHTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCC
T ss_pred HHHHHHHhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcC
Confidence 99999999655555559999999999999999999864335799999999999998776667899999999999999999
Q ss_pred CCCEEEEeCCeEEEEEEEEeCCeee
Q psy254 162 PGSRIFVDDGLISLVVKSIVKSYQL 186 (187)
Q Consensus 162 ~Gd~IlidDG~i~l~V~~v~~~~i~ 186 (187)
+||+||+|||+|.|+|.+++++.+.
T Consensus 189 ~Gd~IlidDG~i~l~V~~v~~~~v~ 213 (550)
T 3gr4_A 189 VGSKIYVDDGLISLQVKQKGADFLV 213 (550)
T ss_dssp TTCEEEETTTTEEEEEEEECSSEEE
T ss_pred CCCEEEEeCCEEEEEEEEEeCCEEE
Confidence 9999999999999999999888753
No 2
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=7.2e-48 Score=346.80 Aligned_cols=159 Identities=47% Similarity=0.780 Sum_probs=146.2
Q ss_pred cHH-HhhcCCCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCC
Q psy254 17 TFV-DHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIG 95 (187)
Q Consensus 17 ~~l-~~~~~l~i~~~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~ 95 (187)
++| .+++.|+.. ++..+|+|||||||||||+++++|++|+++||||||||||||++++|+++|+++|+++++++
T Consensus 2 ~~~~~~~~~~~~~-~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g---- 76 (499)
T 3hqn_D 2 SQLAHNLTLSIFD-PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG---- 76 (499)
T ss_dssp CHHHHHHTCCTTS-CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT----
T ss_pred chHHHHHHhccCC-CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC----
Confidence 355 778888765 67789999999999999999999999999999999999999999999999999999999998
Q ss_pred CcceeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEE
Q psy254 96 MPHALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISL 175 (187)
Q Consensus 96 ~~~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l 175 (187)
+||+||+||+|||||||.++++ +++ |++|++|+|+++..|...|+.+.++++|++|+++|+|||+||+|||+|.|
T Consensus 77 --~~vaIl~Dl~GPkIR~g~~~~~--~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l 151 (499)
T 3hqn_D 77 --VNIAIALDTKGPEIRTGQFVGG--DAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILIL 151 (499)
T ss_dssp --CCCEEEEECCCCCCBBCCBGGG--EEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEE
T ss_pred --CcEEEEEeCCCCEEeeeccCCC--CeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEE
Confidence 9999999999999999999863 357 99999999999876656789999999999999999999999999999999
Q ss_pred EEEEEe-CCee
Q psy254 176 VVKSIV-KSYQ 185 (187)
Q Consensus 176 ~V~~v~-~~~i 185 (187)
+|.+++ ++.+
T Consensus 152 ~V~~~~~~~~i 162 (499)
T 3hqn_D 152 QVQSHEDEQTL 162 (499)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEcCCCeE
Confidence 999997 4444
No 3
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=8.8e-48 Score=347.21 Aligned_cols=161 Identities=42% Similarity=0.642 Sum_probs=143.5
Q ss_pred cHHHhhcCCCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCC
Q psy254 17 TFVDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGM 96 (187)
Q Consensus 17 ~~l~~~~~l~i~~~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~ 96 (187)
++|+|+|.|++..+ ..+|+|||||||||||++++.|++|+++||||||||||||++++|+++|++||+++++++.
T Consensus 2 ~~~~~~~~~~~~~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~---- 76 (500)
T 1a3w_A 2 SRLERLTSLNVVAG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPG---- 76 (500)
T ss_dssp CHHHHHHCC------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCS----
T ss_pred chhhhhhhcCcccc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC----
Confidence 67999999999875 6689999999999999999999999999999999999999999999999999999999873
Q ss_pred cceeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEE
Q psy254 97 PHALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLV 176 (187)
Q Consensus 97 ~~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~ 176 (187)
+||+||+||+|||||||.++++ .++.|++|++|+|+.+..|...|+.+.++++|++|+++|+|||+||+|||+|.|+
T Consensus 77 -~~v~il~Dl~GPkiR~g~~~~~--~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~ 153 (500)
T 1a3w_A 77 -RPLAIALDTKGPEIRTGTTTND--VDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQ 153 (500)
T ss_dssp -SCCCCEEECCCSCCBBCCCSSS--SCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEE
T ss_pred -cceEEEEeCCCCEEEEeecCCC--CceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEE
Confidence 6899999999999999999864 3699999999999998755557888999999999999999999999999999999
Q ss_pred EEEE-eCCee
Q psy254 177 VKSI-VKSYQ 185 (187)
Q Consensus 177 V~~v-~~~~i 185 (187)
|.++ +++.+
T Consensus 154 V~~~~~~~~v 163 (500)
T 1a3w_A 154 VLEVVDDKTL 163 (500)
T ss_dssp CCBCCC--CE
T ss_pred EEEEccCCeE
Confidence 9999 66654
No 4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=3.4e-46 Score=337.88 Aligned_cols=158 Identities=41% Similarity=0.665 Sum_probs=138.6
Q ss_pred HHHhhcCCCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHH-HhCCCCCC
Q psy254 18 FVDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVE-NYSKRIGM 96 (187)
Q Consensus 18 ~l~~~~~l~i~~~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~-~~~~~~~~ 96 (187)
-|+++|.. +..+....|+|||||||||||++++.|++|+++||||||||||||++++|+++|++||++++ +++
T Consensus 28 ~~~~~~~~-~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~----- 101 (526)
T 4drs_A 28 GMDKICSP-LADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH----- 101 (526)
T ss_dssp HHHHC----------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-----
T ss_pred cchhhhcc-cccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-----
Confidence 46888866 66667789999999999999999999999999999999999999999999999999999987 456
Q ss_pred cceeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEE
Q psy254 97 PHALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLV 176 (187)
Q Consensus 97 ~~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~ 176 (187)
+||+||+||+|||||||.++++ +++.|++|+.|+|+++.. ..|+.+.++++|++|+++|++||+||+|||+|.|+
T Consensus 102 -~~vaIl~Dl~GPkIR~g~~~~~--~~i~L~~G~~v~lt~~~~--~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~ 176 (526)
T 4drs_A 102 -STVGIMLDTKGPEIRTGMLEGG--KPIELKAGQTLKITTDYS--MLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQ 176 (526)
T ss_dssp -CCCEEEEECCCSCCBBCCBSTT--CCEECCTTSEEEEESCCS--SCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEE
T ss_pred -CceEEEEECCCCeeEEEecCCC--CeEEecCCCEEEEEeCCc--cCCCcceeeecchhhHHHhcCCCEEEEeCCCceEE
Confidence 8999999999999999999874 579999999999998854 46888999999999999999999999999999999
Q ss_pred EEEEeCCeee
Q psy254 177 VKSIVKSYQL 186 (187)
Q Consensus 177 V~~v~~~~i~ 186 (187)
|.+++++.+.
T Consensus 177 V~~v~~~~i~ 186 (526)
T 4drs_A 177 VLEIGDDFIV 186 (526)
T ss_dssp EEEECSSEEE
T ss_pred EEEEeCCeEE
Confidence 9999988763
No 5
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.1e-46 Score=334.69 Aligned_cols=146 Identities=40% Similarity=0.615 Sum_probs=125.6
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHH-HhCCCCCCcceeEEEeeCCC
Q psy254 30 KSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVE-NYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 30 ~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~-~~~~~~~~~~~v~I~~Dl~G 108 (187)
++..+|+|||||||||||+++++|++|+++||||||||||||++++|+++|+++|++++ +++ +||+||+||+|
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~------~~vaIllDl~G 114 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN------CLLGMLLDTKG 114 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS------CCCEEEEECCC
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC------CceEEEEeCCC
Confidence 35678999999999999999999999999999999999999999999999999999998 777 99999999999
Q ss_pred CeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEeCCeee
Q psy254 109 PEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVVKSIVKSYQL 186 (187)
Q Consensus 109 PkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~ 186 (187)
||||||.++++ ++.|++|++|+|+++. ...|+.+.++++|++|+++|+|||+||+|||+|.|+|.+++++.+.
T Consensus 115 PkIR~G~~~~~---~~~L~~G~~~~lt~~~--~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~ 187 (520)
T 3khd_A 115 PEIRTGFLKNK---EVHLKEGSKLKLVTDY--EFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVI 187 (520)
T ss_dssp CCEEBCEEC--------------CEEESCT--TCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEE
T ss_pred CeEEeeccCCC---CeEecCCCEEEEecCC--CcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEE
Confidence 99999999864 3599999999999873 3468889999999999999999999999999999999999887653
No 6
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=3.5e-45 Score=329.86 Aligned_cols=145 Identities=42% Similarity=0.693 Sum_probs=132.6
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHh-CCCCCCcceeEEEeeCCCCe
Q psy254 32 SYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENY-SKRIGMPHALAIALDTKGPE 110 (187)
Q Consensus 32 ~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~-~~~~~~~~~v~I~~Dl~GPk 110 (187)
...|+|||||||||||++++.|++|+++||||||||||||++++|+++|+++|++++++ + +||+||+||+|||
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~------~~vaIl~Dl~GPk 106 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE------ARLAILLDTKGPE 106 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT------CCCEEEEECCCCC
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC------CceEEEEECCCCE
Confidence 35799999999999999999999999999999999999999999999999999999998 7 9999999999999
Q ss_pred eEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEeCCeee
Q psy254 111 IRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVVKSIVKSYQL 186 (187)
Q Consensus 111 IRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~ 186 (187)
||||.+.++ +++.|++|++|+|+++. ...|+.+.++++|++|+++|+|||+||+|||+|.|+|.+++++.+.
T Consensus 107 IR~g~~~~~--~~v~L~~G~~~~lt~~~--~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~ 178 (511)
T 3gg8_A 107 IRTGFLKDH--KPITLQQGATLKIVTDY--NLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVI 178 (511)
T ss_dssp CBBCC-------CEEECTTCEEEEESCT--TCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEE
T ss_pred EecccCCCC--CCEEEccCCEEEEEECC--CCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEE
Confidence 999999863 46999999999999872 3578889999999999999999999999999999999999988753
No 7
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=4.5e-45 Score=335.06 Aligned_cols=154 Identities=43% Similarity=0.657 Sum_probs=132.5
Q ss_pred HHhhcCCCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcc
Q psy254 19 VDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPH 98 (187)
Q Consensus 19 l~~~~~l~i~~~~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~ 98 (187)
.-|.++| ...-|..+|+|||||||||||++++.|++|+++||||||||||||++++|+++|+++|+++++++ +
T Consensus 8 ~~~~~~~-~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~------~ 80 (606)
T 3t05_A 8 HHHSSGL-VPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD------K 80 (606)
T ss_dssp ---------------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT------C
T ss_pred ccccCCc-CcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC------C
Confidence 3567777 55557778999999999999999999999999999999999999999999999999999999998 9
Q ss_pred eeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEE-
Q psy254 99 ALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVV- 177 (187)
Q Consensus 99 ~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V- 177 (187)
||+||+||+|||||||.+++ .++.|++|++|+|+.+. ..|+.+.++++|++|+++++|||+||+|||+|.|+|
T Consensus 81 ~vail~Dl~GPkiR~g~~~~---~~i~L~~G~~~~lt~~~---~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~ 154 (606)
T 3t05_A 81 IVAILLDTKGPEIRTHNMKD---GIIELERGNEVIVSMNE---VEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVK 154 (606)
T ss_dssp CCEEEEECCCCCCBBCCBTT---SEEECCSSCEEEEESSC---CCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCCEEEeecCCC---CCEEEcCCCEEEEEecC---cCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEE
Confidence 99999999999999999986 37999999999999885 368889999999999999999999999999999999
Q ss_pred -EEEeCCee
Q psy254 178 -KSIVKSYQ 185 (187)
Q Consensus 178 -~~v~~~~i 185 (187)
.+++++.+
T Consensus 155 ~~~~~~~~v 163 (606)
T 3t05_A 155 DIDHAKKEV 163 (606)
T ss_dssp EEETTTTEE
T ss_pred EEEecCCEE
Confidence 66776654
No 8
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=9.4e-45 Score=325.22 Aligned_cols=143 Identities=44% Similarity=0.727 Sum_probs=133.5
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEe
Q psy254 34 VRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 34 ~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRt 113 (187)
+|+|||||||||||++++.|++|+++||||||||||||++++|+++++++|+++++++ +||+||+||+||||||
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~------~~v~il~Dl~GPkiR~ 74 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG------KTAAILLDTKGPEIRT 74 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT------CCCEEEEECCCCCEEB
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC------CceEEEEeCCCCEEEE
Confidence 4899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred eecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEeCCeee
Q psy254 114 GLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVVKSIVKSYQL 186 (187)
Q Consensus 114 G~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~ 186 (187)
|.+.++ .++.|++|++|+|+.+..+ .|+.+.++++|++|+++|+|||+||+|||+|.|+|.+++++.+.
T Consensus 75 g~~~~~--~~v~L~~G~~~~lt~~~~~--~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~ 143 (470)
T 1e0t_A 75 MKLEGG--NDVSLKAGQTFTFTTDKSV--IGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVI 143 (470)
T ss_dssp CCBGGG--CCEEECTTCEEEEESCTTC--CBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEE
T ss_pred EecCCC--CceEEecCCEEEEEeCCcc--CCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEE
Confidence 999821 3699999999999987432 57888999999999999999999999999999999999887653
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1e-43 Score=326.21 Aligned_cols=140 Identities=44% Similarity=0.692 Sum_probs=132.6
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEe
Q psy254 34 VRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 34 ~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRt 113 (187)
+|+|||||||||||++++.|++|+++||||||||||||++++|+++++++|+++++++ +||+||+||+||||||
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~------~~v~il~Dl~GPkiR~ 75 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG------RTVAILLDTKGPEIRT 75 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT------CCCEEEEECCCCCCBB
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC------CceEEEEeCCCCEEEE
Confidence 6899999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred eecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEEEEE--eCCee
Q psy254 114 GLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVVKSI--VKSYQ 185 (187)
Q Consensus 114 G~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v--~~~~i 185 (187)
|.+.++ ++.|++|++|+|+.+. ..|+.+.++++|++|+++|+|||+||+|||+|.|+|.++ +++.+
T Consensus 76 g~~~~~---~i~l~~G~~~~l~~~~---~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i 143 (587)
T 2e28_A 76 HNMENG---AIELKEGSKLVISMSE---VLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEI 143 (587)
T ss_dssp CCCTTS---CBCCCSSCEEEEESSC---CCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEE
T ss_pred eccCCC---cEEEecCCEEEEEecC---cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeE
Confidence 999864 6999999999999875 368889999999999999999999999999999999999 66654
No 10
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.3e-43 Score=316.19 Aligned_cols=138 Identities=22% Similarity=0.333 Sum_probs=129.5
Q ss_pred CCCCceEEEecCCCCCCHH--HHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCe
Q psy254 33 YVRLTGIICTIGPASVAVD--MLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPE 110 (187)
Q Consensus 33 ~~r~TkIi~TiGPas~~~~--~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPk 110 (187)
.+|+|||||||||||++++ +|++|+++ |||||||||||++++|+++|+++|+++++++ +||+||+||+|||
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g------~~vaIl~Dl~GPk 85 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN------RPLAVIVDLKGPS 85 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT------CCCEEEEECCCCC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC------CceEEEEeCCCCE
Confidence 5799999999999999988 99999999 9999999999999999999999999999998 9999999999999
Q ss_pred eEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEeCCeee
Q psy254 111 IRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVVKSIVKSYQL 186 (187)
Q Consensus 111 IRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~ 186 (187)
||||.+. ++.|++|++|+|+.+.. .++ +.++++|++|+++|+|||+||+|||+|.|+|.+++++.+.
T Consensus 86 IR~g~~~-----~v~L~~G~~~~lt~~~~---~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~ 152 (461)
T 3qtg_A 86 IRVGSTS-----PINVQEGEVVKFKLSDK---SDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIE 152 (461)
T ss_dssp CBCCBCS-----CEEECTTCEEEEEECSB---CCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEE
T ss_pred EEECCCC-----CEEEeCCCEEEEEecCC---CCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEE
Confidence 9999995 38999999999998864 344 6899999999999999999999999999999999888753
No 11
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.54 E-value=0.55 Score=41.94 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=43.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 36 LTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+-.+-+.+|...+..+.++.|+++|+++.=||++|+..+.+.++++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 445677888888899999999999999999999999888787777777764
No 12
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=88.97 E-value=1.8 Score=33.19 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=43.3
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhh--cCCCCCEEEEe--CCeEEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITK--VVKPGSRIFVD--DGLISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~--~v~~Gd~Ilid--DG~i~l~V~~v~~~~i 185 (187)
++.|+++.|+.. ..|..........++-..|.. .+++|+.+.+. +|.+..+|.+++++.+
T Consensus 52 m~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V 117 (171)
T 2k8i_A 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHV 117 (171)
T ss_dssp CCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEE
T ss_pred CCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEE
Confidence 467888777654 445444445566777777764 68999999997 6777778999988865
No 13
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.20 E-value=1.1 Score=38.57 Aligned_cols=49 Identities=24% Similarity=0.371 Sum_probs=38.9
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.|+.+|+.
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~ 146 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 146 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 3445556555678999999999999999999999988777777666654
No 14
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=87.30 E-value=1.7 Score=32.25 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=19.1
Q ss_pred hhhcCCCCCEEEEeCC----eEEEEEEEE
Q psy254 156 ITKVVKPGSRIFVDDG----LISLVVKSI 180 (187)
Q Consensus 156 l~~~v~~Gd~IlidDG----~i~l~V~~v 180 (187)
++.+|++||.|++.|| ...-+|.+|
T Consensus 88 ~A~~l~~GD~v~~~~~~~~~~~~~~V~~v 116 (145)
T 1at0_A 88 FADRIEEKNQVLVRDVETGELRPQRVVKV 116 (145)
T ss_dssp EGGGCCTTCEEEEECTTTCCEEEEEEEEE
T ss_pred EHHHCcCCCEEEEecCCCCCEEEEEEEEE
Confidence 6789999999999987 334455555
No 15
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.91 E-value=2.9 Score=34.62 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=51.6
Q ss_pred CCceEEEecCCCCC---------C----HHHHHHHHHhcCcEEEEec-CCCC-------HHHHHHHHHHHHHHHHHhCCC
Q psy254 35 RLTGIICTIGPASV---------A----VDMLEKIIETGMNIARLNF-SHGS-------YEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 35 r~TkIi~TiGPas~---------~----~~~i~~li~aGm~v~RiN~-sHg~-------~e~~~~~i~~ir~a~~~~~~~ 93 (187)
.+++||+=|-+.-+ + .+..++|+++|+++.=||. |-.. .+|+.+++.-|+...++++
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~-- 90 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE-- 90 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC--
Confidence 36789998855332 1 3566889999999999999 4312 6788888888888776644
Q ss_pred CCCcceeEEEeeCCCCeeE
Q psy254 94 IGMPHALAIALDTKGPEIR 112 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~GPkIR 112 (187)
++|.+|+.-|++=
T Consensus 91 ------~piSIDT~~~~va 103 (282)
T 1aj0_A 91 ------VWISVDTSKPEVI 103 (282)
T ss_dssp ------CEEEEECCCHHHH
T ss_pred ------CeEEEeCCCHHHH
Confidence 6788899888763
No 16
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=86.72 E-value=0.83 Score=35.99 Aligned_cols=60 Identities=12% Similarity=0.180 Sum_probs=42.9
Q ss_pred eeeCCEEEEeeCC--CcccCCCcCEEeeCcchhhh--cCCCCCEEEEe--CCeEEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTDA--AFAEKGSATDLYVDYTNITK--VVKPGSRIFVD--DGLISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~~--~~~~~~~~~~i~v~~~~l~~--~v~~Gd~Ilid--DG~i~l~V~~v~~~~i 185 (187)
++.|+++.|+... .|..........++-..|.. .++||+.+.+. +|.+..+|++|+++.|
T Consensus 52 m~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V 117 (196)
T 2kfw_A 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHV 117 (196)
T ss_dssp SCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSE
T ss_pred CCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEE
Confidence 5679988887653 34333444566777777764 68999999997 5667778888888765
No 17
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.54 E-value=1.2 Score=38.48 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=40.7
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 37 TGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 37 TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
..+.+.+|+.....+.++.++++|++++=||++||+++...+.|+.+|+.
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 34677787655667889999999999999999999987777777777765
No 18
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.48 E-value=1.2 Score=39.80 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=43.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 35 RLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 35 r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
.+..+-+.+|+..+..+.++.|+++|+++.=+|.+|+..+.+.++++.+|+.
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~ 294 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK 294 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh
Confidence 3456777888888889999999999999999999999888877777777754
No 19
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.01 E-value=1.4 Score=37.74 Aligned_cols=46 Identities=22% Similarity=0.383 Sum_probs=36.7
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+-+|... .+.++.++++|++++=||++||..+.+.+.++.+|+.
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 143 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh
Confidence 445555533 8999999999999999999999987777777777654
No 20
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=85.91 E-value=2.5 Score=35.50 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHHHhcCcEEEEecCCCCH----------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCe
Q psy254 44 GPASVAVDMLEKIIETGMNIARLNFSHGSY----------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPE 110 (187)
Q Consensus 44 GPas~~~~~i~~li~aGm~v~RiN~sHg~~----------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPk 110 (187)
|+...+.+.|+.|-..|+|++||-++.... +...+.++.+=+.+.+.| +.+++|+-...
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--------i~vildlH~~~ 107 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--------MYVIINLHHEN 107 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--------CEEEECCCSCT
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEecCCcc
Confidence 334456899999999999999999886431 233444444444444444 78999997653
No 21
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=85.14 E-value=1.4 Score=39.27 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=40.9
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
.+.+.+|......+.++.++++|+++.=||++||....+.++++.+|+.
T Consensus 245 ~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 245 LCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 4556677766678999999999999999999999988777888777765
No 22
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=85.07 E-value=2.3 Score=34.37 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=38.4
Q ss_pred CCHHHHHHHH-HhcCcEEEEecCCC---------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 48 VAVDMLEKII-ETGMNIARLNFSHG---------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 48 ~~~~~i~~li-~aGm~v~RiN~sHg---------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
-+.+.++.|. +.|+|++|+-++.. +++.+.+.++.+=+.+.+.| +.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G--------i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED--------MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT--------CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC--------CEEEEEcCC
Confidence 4678899998 49999999988762 23455666666666666666 678888864
No 23
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.88 E-value=1.5 Score=38.98 Aligned_cols=51 Identities=10% Similarity=0.253 Sum_probs=42.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 36 LTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+..+-+.+|...+..+.++.|+++|+++.=||.+|+......++++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 445666778877889999999999999999999999988777777777764
No 24
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=84.68 E-value=2.8 Score=37.15 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHhcCcEEEEecCCCC----------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCe
Q psy254 47 SVAVDMLEKIIETGMNIARLNFSHGS----------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPE 110 (187)
Q Consensus 47 s~~~~~i~~li~aGm~v~RiN~sHg~----------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPk 110 (187)
....+.|+.|-+.|+|++||-++... .+.+.+.++.+=+.+.+.| +.+++|+-...
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G--------i~vildlH~~~ 110 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--------MYVIINLHHEN 110 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--------CEEEEECCSCT
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEecCCCC
Confidence 34689999999999999999888543 1233344444444444444 78999997653
No 25
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=83.99 E-value=4.1 Score=30.72 Aligned_cols=60 Identities=15% Similarity=0.278 Sum_probs=42.0
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhh--cCCCCCEEEEe--CCe-EEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITK--VVKPGSRIFVD--DGL-ISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~--~v~~Gd~Ilid--DG~-i~l~V~~v~~~~i 185 (187)
++.|++..++.. ..|..........++-..|.. .+++|+.+.+. +|. +..+|.+++++.+
T Consensus 47 m~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v 113 (158)
T 3cgm_A 47 REEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEV 113 (158)
T ss_dssp CBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEE
T ss_pred CCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEE
Confidence 567998877754 344433444456677666654 78999999997 565 4678999988875
No 26
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=83.51 E-value=1.1 Score=40.82 Aligned_cols=50 Identities=28% Similarity=0.325 Sum_probs=42.4
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 37 TGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 37 TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
-.+=|.+|-..++.+....|++||+|++=|..+||..+...++++.||+.
T Consensus 270 L~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 270 LYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp BCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 34566677666678999999999999999999999999988888888864
No 27
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=83.33 E-value=5.7 Score=29.56 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=42.1
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhh-hcCCCCCEEEEe--CCe-EEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNIT-KVVKPGSRIFVD--DGL-ISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~-~~v~~Gd~Ilid--DG~-i~l~V~~v~~~~i 185 (187)
++.|++..++.. ..|...+......++-..|. ..+++|+.+.+. ||. +..+|.+++++.+
T Consensus 57 m~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v 122 (151)
T 2kr7_A 57 AQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHV 122 (151)
T ss_dssp CCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEE
T ss_pred CCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEE
Confidence 467888877754 34444444445667766663 368999999987 575 6778999998875
No 28
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=83.25 E-value=3 Score=35.39 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=41.0
Q ss_pred CCCCCCHHHHHHHHHhcCcEEEEecCCCCH--------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 44 GPASVAVDMLEKIIETGMNIARLNFSHGSY--------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 44 GPas~~~~~i~~li~aGm~v~RiN~sHg~~--------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
|..-.+.+.++.|-+.|+|++||-++.... +.+.+.++.+=+.+.+.| +.+++|+-.-
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--------i~vIldlH~~ 114 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--------LYAIVNVHHD 114 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--------CEEEEECCTT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--------CEEEEECCCC
Confidence 333447899999999999999999985421 344555555555555555 7899999864
No 29
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=83.02 E-value=2.2 Score=34.48 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=36.9
Q ss_pred CCHHHHHHHH-HhcCcEEEEecCCC-------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 48 VAVDMLEKII-ETGMNIARLNFSHG-------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 48 ~~~~~i~~li-~aGm~v~RiN~sHg-------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
-+.+.++.|. ..|+|++|+-++.. +++...+.++.+=+.+.+.| +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--------i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND--------MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT--------CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC--------CEEEEEcCC
Confidence 3578889888 79999999987653 23345555666556666655 677888754
No 30
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=82.75 E-value=3.7 Score=34.58 Aligned_cols=58 Identities=14% Similarity=0.224 Sum_probs=39.0
Q ss_pred CCCCCCHHHHHHHHHhcCcEEEEecCCCCH---------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 44 GPASVAVDMLEKIIETGMNIARLNFSHGSY---------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 44 GPas~~~~~i~~li~aGm~v~RiN~sHg~~---------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
|+.....+.++.|-..|+|++||-++.... +.+.+.++.+=+.+.+.| +.+++|+-..
T Consensus 58 ~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--------i~vild~H~~ 124 (380)
T 1edg_A 58 SGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--------MYVILNTHHD 124 (380)
T ss_dssp TCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--------CEEEEECCSC
T ss_pred CCCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC--------CEEEEeCCCc
Confidence 344456889999999999999998875432 233344444444444444 7899999864
No 31
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=80.69 E-value=7.1 Score=29.83 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=43.1
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhh--cCCCCCEEEEe--CCe-EEEEEEEEeCCeee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITK--VVKPGSRIFVD--DGL-ISLVVKSIVKSYQL 186 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~--~v~~Gd~Ilid--DG~-i~l~V~~v~~~~i~ 186 (187)
++.|++..|+.. ..|..........++-..|.. .+++|..+.+. ||. +..+|.+++++.+.
T Consensus 75 m~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~ 142 (169)
T 4dt4_A 75 LKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSIT 142 (169)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEE
T ss_pred CCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEE
Confidence 567888887754 344333334556677777764 58999999986 464 67899999998763
No 32
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=79.59 E-value=5.9 Score=33.36 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHhcCcEEEEecCCCCH----------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 47 SVAVDMLEKIIETGMNIARLNFSHGSY----------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 47 s~~~~~i~~li~aGm~v~RiN~sHg~~----------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
....+.++.|-+.|+|++||-++.... +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G--------i~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG--------AFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--------CEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEECCC
Confidence 346789999999999999998875321 122334444434444444 788999975
No 33
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=78.50 E-value=3.2 Score=36.59 Aligned_cols=48 Identities=17% Similarity=0.404 Sum_probs=39.2
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+-+|+.....+.+..|+++|++++=++++||......+.++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 344566655667899999999999999999999888777888887765
No 34
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=78.06 E-value=3.7 Score=33.50 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=36.4
Q ss_pred CHHHHHHHHHhcCcEEEEecCCC---------C-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHG---------S-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg---------~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
+.+.++.|-+.|+|++||-++.. . .+...+.++.+=+.+.+.| +.+++|+-..
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--------i~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--------AYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--------CEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--------CEEEEecccc
Confidence 47899999999999999988632 1 1334444555444455544 7899998765
No 35
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=77.92 E-value=8.9 Score=32.17 Aligned_cols=70 Identities=23% Similarity=0.252 Sum_probs=49.3
Q ss_pred CCCceEEEec--CCCCC-------C----HHHHHHHHHhcCcEEEEecCC---CC-----HHHHHHHHHHHHHHHHHhCC
Q psy254 34 VRLTGIICTI--GPASV-------A----VDMLEKIIETGMNIARLNFSH---GS-----YEYHGQTIKNIRQAVENYSK 92 (187)
Q Consensus 34 ~r~TkIi~Ti--GPas~-------~----~~~i~~li~aGm~v~RiN~sH---g~-----~e~~~~~i~~ir~a~~~~~~ 92 (187)
..+|.||+-| -|=|- + .+..++|+++|+++.=||.-- |. .+|+.+++.-|+.+.++.+
T Consensus 7 ~~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~- 85 (314)
T 2vef_A 7 HAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD- 85 (314)
T ss_dssp CCCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-
Confidence 4678999877 55321 1 356688999999999999933 22 2788888888888776543
Q ss_pred CCCCcceeEEEeeCCCCee
Q psy254 93 RIGMPHALAIALDTKGPEI 111 (187)
Q Consensus 93 ~~~~~~~v~I~~Dl~GPkI 111 (187)
+.|.+|+-=|++
T Consensus 86 -------vpiSIDT~~~~V 97 (314)
T 2vef_A 86 -------VLISIDTWKSQV 97 (314)
T ss_dssp -------CEEEEECSCHHH
T ss_pred -------ceEEEeCCCHHH
Confidence 677889876665
No 36
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=77.89 E-value=2.3 Score=35.25 Aligned_cols=52 Identities=29% Similarity=0.368 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH--------------------HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE--------------------YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e--------------------~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
.+.++.|-+.|+|++||-++....+ ...+.++.+=+.+.+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G--------i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG--------LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT--------CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC--------CEEEEecCCC
Confidence 6788999999999999998732110 14455555555555555 7888998765
No 37
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=77.35 E-value=3.6 Score=33.84 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEe
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRt 113 (187)
+..++|+++|+++.=||+--...++..++..-|+.+.+..+ ++|.+|+.=|++--
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~--------~pisIDT~~~~v~~ 92 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD--------LPCCLDSTNPDAIE 92 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC--------CCEEEECSCHHHHH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC--------CeEEEeCCCHHHHH
Confidence 56688999999999999977778888888888888776644 67888998777643
No 38
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=76.17 E-value=10 Score=31.52 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=50.6
Q ss_pred CCceEEEec--CCCCCC-----------HHHHHHHHHhcCcEEEEecCC--------CCHHHHHHHHHHHHHHHHHhCCC
Q psy254 35 RLTGIICTI--GPASVA-----------VDMLEKIIETGMNIARLNFSH--------GSYEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 35 r~TkIi~Ti--GPas~~-----------~~~i~~li~aGm~v~RiN~sH--------g~~e~~~~~i~~ir~a~~~~~~~ 93 (187)
.+++||+=+ .|-|-+ .+..++|+++|+++.=||..- ...|++.+++..|+.+.++++
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-- 115 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-- 115 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--
Confidence 467899988 442211 356788999999999999833 226778888877777766544
Q ss_pred CCCcceeEEEeeCCCCeeEe
Q psy254 94 IGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~GPkIRt 113 (187)
++|.+|+.-|++--
T Consensus 116 ------vpiSIDT~~~~V~~ 129 (297)
T 1tx2_A 116 ------LPISIDTYKAEVAK 129 (297)
T ss_dssp ------SCEEEECSCHHHHH
T ss_pred ------ceEEEeCCCHHHHH
Confidence 67888998887643
No 39
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=75.61 E-value=3.3 Score=36.03 Aligned_cols=44 Identities=23% Similarity=0.411 Sum_probs=34.8
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 41 CTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.++++.+|+.
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~ 182 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 182 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc
Confidence 3455543 7899999999999999999999888777777776653
No 40
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=75.43 E-value=5.7 Score=32.29 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=35.2
Q ss_pred CCHHHHHHHHH-hcCcEEEEecCCC------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 48 VAVDMLEKIIE-TGMNIARLNFSHG------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 48 ~~~~~i~~li~-aGm~v~RiN~sHg------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--------l~vild~h~ 102 (306)
T 2cks_A 43 LTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG--------LYVIVDWHI 102 (306)
T ss_dssp CSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT--------CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC--------CEEEEEecC
Confidence 35678888986 6999999987642 22224455555555555544 778888864
No 41
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=75.28 E-value=2.4 Score=21.89 Aligned_cols=18 Identities=22% Similarity=0.195 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy254 73 YEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 73 ~e~~~~~i~~ir~a~~~~ 90 (187)
.++.++|++|+|+++-+-
T Consensus 2 eeeyqemlenlreaevkk 19 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVKK 19 (26)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 367899999999987653
No 42
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=74.81 E-value=9.5 Score=31.89 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=43.4
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+++|- .++ +..+++.++|.+.+.|++.|++.+.-.++++.||++. + ..+.|++|..|
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g------~~~~l~vDan~ 198 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---G------DDFGIMVDYNQ 198 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---C------SSSEEEEECTT
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---C------CCCEEEEECCC
Confidence 3455566552 233 3456677899999999999988877777777777664 4 34678888754
No 43
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=74.35 E-value=4.2 Score=32.86 Aligned_cols=53 Identities=21% Similarity=0.311 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGS--YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~--~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
..+.++.|-+.|+|++|+-++.+. .+...+.++.+=+++.+.| +.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--------i~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--------MVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--------CEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--------CEEEEEeccC
Confidence 456889999999999999876431 1123344444445555555 7888998764
No 44
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=74.22 E-value=10 Score=30.79 Aligned_cols=53 Identities=11% Similarity=0.192 Sum_probs=36.5
Q ss_pred CHHHHHHHHHhcCcEEEEecCC---------CC-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSH---------GS-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sH---------g~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
+.+.|+.|-+.|+|++||-++. +. .+...+.++.+=+.+.+.| +.+++|+-+.
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--------i~vildlh~~ 105 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--------LVVIINCHHF 105 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--------CEEEEECCCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEcCCC
Confidence 5789999999999999997752 22 1233445555545555555 7889999864
No 45
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=73.09 E-value=9.7 Score=32.00 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHhcCcEEEEecCCCC---H-------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 48 VAVDMLEKIIETGMNIARLNFSHGS---Y-------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 48 ~~~~~i~~li~aGm~v~RiN~sHg~---~-------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
...+.++.|-+.|+|++||-++... + +.+.+.++.+=+.+.+.| +.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G--------i~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG--------LYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT--------CEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEECCCc
Confidence 3678999999999999999886521 1 233344444444444444 7889998743
No 46
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=72.78 E-value=9 Score=31.61 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=44.3
Q ss_pred CceEEEec--CCCC-------CC----HHHHHHHHHhcCcEEEEec-CCCC-------HHHHHHHHHHHHHHHHHhCCCC
Q psy254 36 LTGIICTI--GPAS-------VA----VDMLEKIIETGMNIARLNF-SHGS-------YEYHGQTIKNIRQAVENYSKRI 94 (187)
Q Consensus 36 ~TkIi~Ti--GPas-------~~----~~~i~~li~aGm~v~RiN~-sHg~-------~e~~~~~i~~ir~a~~~~~~~~ 94 (187)
+|+||+-| -|-| .+ .+..++|+++|+++.=||. |-.. .+++.+++..|+...+. +
T Consensus 5 ~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~--- 80 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-G--- 80 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-T---
T ss_pred CcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-C---
Confidence 56788776 4521 12 3556889999999999998 4222 57788888888777553 3
Q ss_pred CCcceeEEEeeCCCCeeE
Q psy254 95 GMPHALAIALDTKGPEIR 112 (187)
Q Consensus 95 ~~~~~v~I~~Dl~GPkIR 112 (187)
+.|.+|+.-|++=
T Consensus 81 -----~piSIDT~~~~va 93 (280)
T 1eye_A 81 -----ITVSIDTMRADVA 93 (280)
T ss_dssp -----CCEEEECSCHHHH
T ss_pred -----CEEEEeCCCHHHH
Confidence 5678898877763
No 47
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=72.68 E-value=4.3 Score=30.22 Aligned_cols=58 Identities=9% Similarity=0.150 Sum_probs=40.5
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhh---cCCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITK---VVKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~---~v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
++.|++..++.. ..|...+......++-..|.. .+++|+.+.+.+ +..+|.++.++.+
T Consensus 65 m~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v 127 (151)
T 1ix5_A 65 MEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEV 127 (151)
T ss_dssp CCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEE
T ss_pred CCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEE
Confidence 567886666544 445444444455666667764 589999999887 6778999998875
No 48
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=72.14 E-value=8 Score=31.25 Aligned_cols=52 Identities=12% Similarity=0.234 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCCH----------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGSY----------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~~----------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+.++.|.+.|+|++|+-++.... +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--------i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--------LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT--------CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC--------CEEEEEecC
Confidence 5678999999999999998663111 233444444444455555 788899875
No 49
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=71.91 E-value=7 Score=31.86 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=38.1
Q ss_pred CCCHHHHHHHH-HhcCcEEEEecCCCC-----HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 47 SVAVDMLEKII-ETGMNIARLNFSHGS-----YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 47 s~~~~~i~~li-~aGm~v~RiN~sHg~-----~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.-+.+.++.|. ..|+|++|+-+.... .+.+.+.++.+=+++.+.| +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--------i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLD--------IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHT--------CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCC--------CEEEEEecc
Confidence 44678899998 579999999876531 1235566666666666666 678888875
No 50
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=71.83 E-value=8 Score=29.10 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=40.6
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhhc---CCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITKV---VKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~~---v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
++.|++.+++.. ..|...+......++-..|... +++|+.+.++. . ..+|.+++++.+
T Consensus 64 m~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V 126 (157)
T 3pr9_A 64 MDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRV 126 (157)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEE
T ss_pred CCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEE
Confidence 567898887754 4454444455667777777652 56799999854 4 468999998876
No 51
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=71.63 E-value=9.1 Score=31.36 Aligned_cols=53 Identities=25% Similarity=0.312 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHhcCcEEEEecCCC---------C-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 48 VAVDMLEKIIETGMNIARLNFSHG---------S-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 48 ~~~~~i~~li~aGm~v~RiN~sHg---------~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+.+.++.|-+.|+|++||-++.. . .+...+.++.+-+.+.+.| +.+++|+-.
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G--------i~vildlh~ 91 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--------LGLVLDMHH 91 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--------CEEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC--------CEEEEEecC
Confidence 346889999999999999987522 1 1234444555445555555 677777753
No 52
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=70.95 E-value=9.1 Score=32.26 Aligned_cols=64 Identities=6% Similarity=0.189 Sum_probs=44.3
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|.|....++ +..+++.++|.+.+.|++.|++.+.-.++++.||++. | ..+.|++|..|
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G------~d~~l~vDan~ 200 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---G------DSFPLMVDANM 200 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---C------TTSCEEEECTT
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---C------CCCeEEEECCC
Confidence 345566655422234 3456678899999999999988887777777777764 4 23577888754
No 53
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=70.81 E-value=7.4 Score=33.97 Aligned_cols=53 Identities=15% Similarity=0.126 Sum_probs=33.9
Q ss_pred CCCHHHH-HHHHHhcCcEEEEecCCCCH--------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 47 SVAVDML-EKIIETGMNIARLNFSHGSY--------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 47 s~~~~~i-~~li~aGm~v~RiN~sHg~~--------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
....+.| +.|-+.|+|++||-++.... +.+.+.++.+=+.+++.| +.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~G--------i~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERG--------YKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTT--------CEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCC--------CEEEEEcc
Confidence 4567888 89999999999998762211 223333333334445555 77888854
No 54
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=70.61 E-value=13 Score=29.97 Aligned_cols=55 Identities=11% Similarity=0.105 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCee
Q psy254 51 DMLEKIIETGMN--IARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEI 111 (187)
Q Consensus 51 ~~i~~li~aGm~--v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkI 111 (187)
...++.++.|++ -+|+|+..++.++..+.+..+++++..++ .|+-+...+.|+.+
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~------~~vIi~~~~~G~~~ 152 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFD------LPLVVESFPRGGKV 152 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHT------CCEEEEECCCSTTC
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcC------CeEEEEeeCCCCcc
Confidence 567889999999 46899998888888888888888888777 67666666666654
No 55
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=70.28 E-value=15 Score=30.99 Aligned_cols=49 Identities=14% Similarity=0.211 Sum_probs=37.1
Q ss_pred HHHHHHHHhcCcEEEEecCCC------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHG------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|.+.+.|++.|+ ..+.-.++++.||++. + ..+.|++|..|
T Consensus 155 ~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g------~d~~l~vDan~ 209 (382)
T 1rvk_A 155 RFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---G------PDIRLMIDAFH 209 (382)
T ss_dssp HHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---C------TTSEEEEECCT
T ss_pred HHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---C------CCCeEEEECCC
Confidence 445677889999999999997 6677777777777654 4 34678889864
No 56
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=70.14 E-value=5 Score=34.44 Aligned_cols=46 Identities=22% Similarity=0.442 Sum_probs=37.0
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 41 CTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+|-.....+.++.++++|++++=++.+||..+...++|+.+|++
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 4455444557899999999999999999999887777788888775
No 57
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=69.38 E-value=6.4 Score=31.02 Aligned_cols=48 Identities=17% Similarity=0.231 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCcEEEEecC-CC----------------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 51 DMLEKIIETGMNIARLNFS-HG----------------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s-Hg----------------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
+.|+.|-++|+|++|+=++ ++ ..+.+.+.++.+-+++++.| +.|++|+
T Consensus 46 ~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G--------i~vil~~ 110 (351)
T 3vup_A 46 PEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN--------ILVFPCL 110 (351)
T ss_dssp HHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT--------CEEEEEE
T ss_pred HHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC--------CeEEEEe
Confidence 5688899999999998432 11 12356666777777777777 6777776
No 58
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=68.95 E-value=5.6 Score=34.37 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=35.6
Q ss_pred CHHHHHHHHHhcCcEEEEecCC-------CCHH--HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSH-------GSYE--YHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sH-------g~~e--~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+.+.++.|-.+|+|++||-+++ +.+- ...+.++.+-+.+.+.| +.|++|+-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--------l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--------IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--------CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--------CEEEEEec
Confidence 4688999999999999998862 2111 13455555555556655 78999974
No 59
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=68.85 E-value=5.5 Score=33.40 Aligned_cols=47 Identities=11% Similarity=0.235 Sum_probs=36.7
Q ss_pred EEecCCCCCCHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 40 ICTIGPASVAVDMLEKIIETG--MNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 40 i~TiGPas~~~~~i~~li~aG--m~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
.+-+|...+..+..+.++++| +++.-+|++||....+.+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 444665445567788899999 99999999999888778888887765
No 60
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=68.76 E-value=8.5 Score=31.91 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=37.2
Q ss_pred CCCHHHHHHHH-HhcCcEEEEecCCCC-----HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 47 SVAVDMLEKII-ETGMNIARLNFSHGS-----YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 47 s~~~~~i~~li-~aGm~v~RiN~sHg~-----~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
..+.+.++.|. +.|+|++|+-+.+.. .+...+.++.+=+++.+.| +.+++|+-+.
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--------i~VilD~H~~ 128 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELG--------IYVIIDWHIL 128 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHT--------CEEEEEEECS
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCC--------CEEEEEeccC
Confidence 34677899986 579999999776532 1123455555556666666 6788898753
No 61
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=68.60 E-value=7 Score=32.77 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=37.1
Q ss_pred CCHHHHHHHH-HhcCcEEEEecCCCC-----HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 48 VAVDMLEKII-ETGMNIARLNFSHGS-----YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 48 ~~~~~i~~li-~aGm~v~RiN~sHg~-----~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
-+.+.+..|. ..|+|++||-++.+. .+.+.+.++.+=+.+.+.| +.+++|+-+.
T Consensus 54 ~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--------i~VIld~H~~ 113 (364)
T 1g01_A 54 VNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHD--------MYVIVDWHVH 113 (364)
T ss_dssp CSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTT--------CEEEEEEECC
T ss_pred cCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEeccC
Confidence 4678899997 899999999877421 1233455555555556655 6788898863
No 62
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=68.17 E-value=6 Score=34.03 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=35.7
Q ss_pred CHHHHHHHHHhcCcEEEEecCC-------CCH--HH-HHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSH-------GSY--EY-HGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sH-------g~~--e~-~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.+.++.|-.+|+|++||-++. +.+ +. ..+.++.+-+.+++.| +.|++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G--------i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--------LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--------CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC--------CEEEEECCC
Confidence 4688999999999999997752 111 11 4555555555556655 788889864
No 63
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=67.78 E-value=21 Score=30.21 Aligned_cols=49 Identities=12% Similarity=0.317 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.+...|++.+.-.++++.||++. | ..+.|++|..|
T Consensus 145 ~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G------~d~~l~vDan~ 193 (382)
T 2gdq_A 145 SNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G------SSITMILDANQ 193 (382)
T ss_dssp HHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C------TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C------CCCEEEEECCC
Confidence 3456677889999999999988887778888777764 4 33678888764
No 64
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=67.65 E-value=16 Score=30.60 Aligned_cols=49 Identities=18% Similarity=0.226 Sum_probs=37.7
Q ss_pred HHHHHHHH-hcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIE-TGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~-aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++ +|.+.+.|++.|++.++-.++++.||++. + ..+.+++|..|
T Consensus 148 ~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g------~~~~l~vDan~ 197 (370)
T 1nu5_A 148 DSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---G------DRASVRVDVNQ 197 (370)
T ss_dssp HHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---G------GGCEEEEECTT
T ss_pred HHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---C------CCCEEEEECCC
Confidence 34466777 99999999999998887778888888764 3 23578889764
No 65
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=66.22 E-value=19 Score=30.05 Aligned_cols=49 Identities=18% Similarity=0.314 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..++++++|-+.+.+++.|++.++-.++++.||++. + ..+.|++|-.|
T Consensus 146 ~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g------~~~~l~vDan~ 194 (366)
T 1tkk_A 146 ADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---G------SAVKLRLDANQ 194 (366)
T ss_dssp HHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---C------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---C------CCCeEEEECCC
Confidence 3456678899999999999988877777887777763 4 34678899754
No 66
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=65.88 E-value=7.4 Score=32.87 Aligned_cols=51 Identities=18% Similarity=0.308 Sum_probs=34.5
Q ss_pred HHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS--YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~--~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
+.|+.|-..|+|++|+-++-+. .+...+.++.+=+++.+.| +.+++|+-..
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~G--------iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNK--------MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--------CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEeccC
Confidence 5788999999999999876432 1223344444445555555 7888999865
No 67
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=65.85 E-value=11 Score=30.88 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHhcCcEEEEecCCC---C-------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 47 SVAVDMLEKIIETGMNIARLNFSHG---S-------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 47 s~~~~~i~~li~aGm~v~RiN~sHg---~-------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
....+.++.|-+.|+|++||-++.. . .+...+.++.+-+.+.+.| +.+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~G--------i~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYG--------IHICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHT--------CEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcC--------CEEEEEec
Confidence 3467899999999999999986421 1 1234455555555556655 67888874
No 68
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=64.83 E-value=17 Score=30.84 Aligned_cols=49 Identities=14% Similarity=0.365 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|+..|++.++-.++++.||++. + ..+.|++|..|
T Consensus 171 ~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g------~~~~l~vDan~ 219 (392)
T 1tzz_A 171 GEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---G------KDAQLAVDANG 219 (392)
T ss_dssp HHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---T------TTCEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---C------CCCeEEEECCC
Confidence 3346678899999999999988887778888887764 4 34678889864
No 69
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=64.80 E-value=19 Score=25.70 Aligned_cols=46 Identities=13% Similarity=0.307 Sum_probs=28.0
Q ss_pred CCCCCCH-----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 44 GPASVAV-----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 44 GPas~~~-----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
||.-+.. ..+..|-+.|++|.|+|+++........- .|++..+..|
T Consensus 19 G~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~--~V~~~L~~~G 69 (110)
T 3kgk_A 19 GTDVDQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNE--KVKAFIEASG 69 (110)
T ss_dssp -----CHHHHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSH--HHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCeEEEEccccChHHHhcCH--HHHHHHHHcC
Confidence 6655432 55778888999999999999987654432 2344444444
No 70
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=64.18 E-value=9.7 Score=31.11 Aligned_cols=49 Identities=12% Similarity=0.082 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCcEEEEecCCC---CH------------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 50 VDMLEKIIETGMNIARLNFSHG---SY------------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg---~~------------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
.+.++.|-++|+|++|+.+.+- .+ +...+.++.+=+.+++.| +.+++||
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~G--------i~vil~l 111 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHN--------ILIFFTL 111 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTT--------CEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcC--------CEEEEEc
Confidence 3578888999999999975432 01 134455566666666666 6677766
No 71
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=63.89 E-value=16 Score=31.49 Aligned_cols=66 Identities=12% Similarity=0.078 Sum_probs=42.2
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCcEEEEecCCCCH---HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAVD----MLEKIIETGMNIARLNFSHGSY---EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~----~i~~li~aGm~v~RiN~sHg~~---e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+.+|.... .+++ ..++++++|.+.+.|.+.|+.. .....-++.++.+.+..+ ..+.|++|.-|
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG------~d~~L~vDaN~ 239 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG------YDNDLMLECYM 239 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC------SSSEEEEECTT
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC------CCCeEEEECCC
Confidence 44566664222 2333 4556777899999999999732 234455555665556666 45788999764
No 72
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=62.90 E-value=12 Score=31.19 Aligned_cols=55 Identities=13% Similarity=0.107 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHhcCcEEEEecCCCCH-----HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 47 SVAVDMLEKIIETGMNIARLNFSHGSY-----EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 47 s~~~~~i~~li~aGm~v~RiN~sHg~~-----e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
....+.++.|-+.|+|++|+-++.... +...+.++.+=+++.+.| +.|++|+-++
T Consensus 85 ~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--------i~Vild~H~~ 144 (359)
T 4hty_A 85 RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELG--------IYTILDWHSI 144 (359)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCE
T ss_pred CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCC--------CEEEEEcCCC
Confidence 345788999999999999997654321 233444555555556655 7888998764
No 73
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=62.60 E-value=20 Score=30.70 Aligned_cols=49 Identities=14% Similarity=0.113 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCcEEEEecCCCC------------------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS------------------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~------------------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+.|+.|-+.|+|++|+-++.+. .+...+.++.+-+.+++.| +.+++||-
T Consensus 66 ~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~G--------i~vil~l~ 132 (440)
T 1uuq_A 66 KELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRD--------MTVVLYFN 132 (440)
T ss_dssp HHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTT--------CEEEEECC
T ss_pred HHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEcc
Confidence 5678888999999999854221 1344556666666667766 67788764
No 74
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=61.85 E-value=24 Score=29.14 Aligned_cols=50 Identities=22% Similarity=0.330 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCcEEEEe-cCCCC-----------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 50 VDMLEKIIETGMNIARLN-FSHGS-----------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN-~sHg~-----------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
.+.|+.|-+.|+|++|+- |+++. .+...+.++.+-+.+++.| +.+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G--------i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG--------IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT--------CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEec
Confidence 467888889999999996 43321 1223445555555666666 67778764
No 75
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=61.32 E-value=7.6 Score=25.78 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=23.7
Q ss_pred hhhcCCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 156 ITKVVKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 156 l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
|.-.-++|..|.|.| .|+.+|.++.++.+
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qV 42 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQV 42 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEE
Confidence 444558899999998 89999999988764
No 76
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=60.54 E-value=21 Score=30.08 Aligned_cols=62 Identities=10% Similarity=0.102 Sum_probs=42.8
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|- .++ +..+++.++|-+.+.+++.|++.+.-.++++.||++ .+ ..+.+++|..|
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g------~~~~l~vDan~ 199 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LP------DGHRVTFDVNR 199 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CC------TTCEEEEECTT
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hC------CCCEEEEeCCC
Confidence 3455677754 233 345667889999999999998777666777777654 34 23578888754
No 77
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=60.37 E-value=8.4 Score=24.83 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=21.0
Q ss_pred cCCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 159 VVKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 159 ~v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
.-++|..|.|+| .|..+|.++.++.+
T Consensus 7 tRk~GE~I~Igd-~I~I~Vl~i~g~~V 32 (63)
T 2bti_A 7 TRRVGETLMIGD-EVTVTVLGVKGNQV 32 (63)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEE
T ss_pred eccCCCeEEeCC-CEEEEEEEEeCCEE
Confidence 347889999987 78999999888764
No 78
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=60.05 E-value=15 Score=31.19 Aligned_cols=64 Identities=5% Similarity=0.112 Sum_probs=44.0
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|....++ +..+++.++|-+.+.|++.|++.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G------~~~~l~vDan~ 199 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VP------AGSKVMIDPNE 199 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SC------TTCEEEEECTT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hC------CCCeEEEECCC
Confidence 445666765432233 445667889999999999998887767777777764 34 34678888864
No 79
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=59.74 E-value=9.4 Score=30.82 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS--YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~--~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.++.|-+.|+|++|+-++.+. ...-.+.++.+=+.+.+.| +.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~G--------i~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNR--------LICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT--------CEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCC--------CEEEEEecc
Confidence 6788899999999999886431 0001233444444455555 778889864
No 80
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=59.70 E-value=19 Score=28.86 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=40.9
Q ss_pred eeeCCEEEEeeC--CCcccCCCcCEEeeCcchhhhc---CCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 126 LVKGQTIRLTTD--AAFAEKGSATDLYVDYTNITKV---VKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 126 l~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~l~~~---v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
++.|++..++.. ..|...+......++-..|... +++|+.+.++ |. ..+|.+++++.+
T Consensus 64 m~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~-~~-~g~V~~v~~~~V 126 (231)
T 3prb_A 64 MDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITID-GI-PGKIVSINSGRV 126 (231)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEET-TE-EEEEEEEETTEE
T ss_pred CCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEec-CC-CEEEEEEcCCEE
Confidence 567888777654 4454445556667777777753 6779999985 44 578999988876
No 81
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=59.44 E-value=17 Score=25.81 Aligned_cols=39 Identities=13% Similarity=0.291 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
..+..|-+.|++|.|+|+++........- .|++..+..|
T Consensus 34 ~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~--~V~~~L~~~G 72 (106)
T 3ktb_A 34 VVIESLKKQGIIVTRHNLRDEPQVYVSNK--TVNDFLQKHG 72 (106)
T ss_dssp HHHHHHHHTTCCCEEEETTTCTTHHHHSH--HHHHHHHTTC
T ss_pred HHHHHHHHCCCEEEEEccccChHHHhcCH--HHHHHHHHcC
Confidence 45777888999999999999987654432 2344444444
No 82
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=59.25 E-value=10 Score=33.15 Aligned_cols=53 Identities=28% Similarity=0.396 Sum_probs=36.0
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGS--YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~--~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
..+.|+.|-..|+|++||-++.+. .+...+.++.+=+.+.+.| +.+++|+-+.
T Consensus 41 ~~~di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~G--------l~VIlDlH~~ 95 (464)
T 1wky_A 41 ATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNN--------LVAVLEVHDA 95 (464)
T ss_dssp HHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT--------CEEEEEECTT
T ss_pred hHHHHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEecCC
Confidence 346888999999999999887431 1223444555555555655 7888998764
No 83
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=58.80 E-value=44 Score=28.43 Aligned_cols=64 Identities=13% Similarity=0.181 Sum_probs=43.2
Q ss_pred CceEEEec-CCCCCCHHHH-----HHHHHhcCcEEEEecCCC------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTI-GPASVAVDML-----EKIIETGMNIARLNFSHG------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~Ti-GPas~~~~~i-----~~li~aGm~v~RiN~sHg------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+...-+|+ |....+++.+ +++++.|.+.+.|..... +.++-.++++.||++ .+ ..+.|+
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g------~~~~l~ 195 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LG------PDAVIG 195 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HC------TTCCEE
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hC------CCCeEE
Confidence 45677887 4433445444 666788999999999654 566666666666655 34 346788
Q ss_pred eeCCC
Q psy254 104 LDTKG 108 (187)
Q Consensus 104 ~Dl~G 108 (187)
+|..|
T Consensus 196 vDaN~ 200 (393)
T 4dwd_A 196 FDANN 200 (393)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 89764
No 84
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=58.53 E-value=14 Score=31.23 Aligned_cols=48 Identities=23% Similarity=0.390 Sum_probs=37.2
Q ss_pred EEEecCCCCCCHHHHHHHHHh--cCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIET--GMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~a--Gm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+.+|....+.+.+..++++ |++++=+.++||....+.+.|+.+|+.
T Consensus 109 v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~ 158 (351)
T 2c6q_A 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR 158 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH
T ss_pred eEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh
Confidence 555566554567888899998 999999999999877777777777764
No 85
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=58.53 E-value=21 Score=31.17 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=38.2
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+.+.|.+|.++|.++.|+-.- ..+..+.+..||+.....+ .++++..|+.
T Consensus 40 Tv~QI~~L~~aG~eiVRvaVp---~~~~A~al~~I~~~l~~~~------~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTVN---DEEAAKAVPEIKRRLLAEG------VEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECC---SHHHHHHHHHHHHHHHHTT------CCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecC---CHHHHHhHHHHHHHHHhcC------CCCceEeeec
Confidence 368899999999999998643 4456677777877655556 6788888875
No 86
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=58.35 E-value=14 Score=32.43 Aligned_cols=51 Identities=27% Similarity=0.287 Sum_probs=35.0
Q ss_pred HHHHHHHHHhcCcEEEEecCCCC---------------H----HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGS---------------Y----EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~---------------~----e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+.++.|-+.|+|++|+-++... + +...+.++.+-+.+.+.| +.+++|+-.
T Consensus 87 ~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~G--------i~VIldlH~ 156 (458)
T 3qho_A 87 EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLG--------IFVLLDYHR 156 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTT--------CEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCC--------CEEEEeccc
Confidence 47888999999999999876322 1 124555555555556655 788888863
No 87
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=58.23 E-value=22 Score=30.14 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=44.0
Q ss_pred CceEEEecCCC-CCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPA-SVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPa-s~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|.. ..++ +..+++.++|.+.+.|.+.|++.+.-.++++.||++. + ..+.|++|..|
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g------~d~~l~vDan~ 216 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---G------DAVPLMVDANQ 216 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---C------TTSCEEEECTT
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---C------CCCEEEEECCC
Confidence 34556665433 1144 3456678899999999999988877778888887764 4 23577888754
No 88
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=58.11 E-value=9.1 Score=32.20 Aligned_cols=54 Identities=17% Similarity=0.069 Sum_probs=35.5
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCC----------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCe
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGS----------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPE 110 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~----------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPk 110 (187)
..+++..|-+.|+|++||-++... .+...+.++.+=+.+.+.| +.+++|+-.-.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~G--------i~vIlDlH~~~ 108 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLG--------AYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTT--------CEEEEEECSTT
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--------CEEEEEecCCc
Confidence 356677778899999999987421 1233444544444455544 78999998654
No 89
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=57.90 E-value=45 Score=23.30 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=15.5
Q ss_pred hcCCCCCEEEEeC-CeEEEEEE
Q psy254 158 KVVKPGSRIFVDD-GLISLVVK 178 (187)
Q Consensus 158 ~~v~~Gd~IlidD-G~i~l~V~ 178 (187)
+.++||++|.++. ....+.+.
T Consensus 73 ~~LkpG~rVaLn~~s~~Iv~iL 94 (109)
T 2wg5_A 73 EELKPGARVALNQQTLAIVNVL 94 (109)
T ss_dssp TTCCTTCEEEEETTTCCEEEEE
T ss_pred HHCCCCCEEEECCcceEeEEeC
Confidence 6799999999997 54444444
No 90
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=57.82 E-value=33 Score=27.19 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCcEE--EEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIA--RLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~--RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+.+++.+++|++.+ .+|....+.++..+.+..+++++++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 578899999999999 888888888888888888888888877
No 91
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=57.79 E-value=22 Score=30.44 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCcEEEEecC-CCC----------------H---------HHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 50 VDMLEKIIETGMNIARLNFS-HGS----------------Y---------EYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~s-Hg~----------------~---------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
.+.++.|-++|+|++|+-.. .+. . ++..+.++.+-+.+++.| +.++
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~G--------I~vi 117 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELG--------IKLI 117 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHT--------CEEE
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCC--------CEEE
Confidence 36789999999999999633 221 0 223455666656666655 7888
Q ss_pred eeCC
Q psy254 104 LDTK 107 (187)
Q Consensus 104 ~Dl~ 107 (187)
+||-
T Consensus 118 L~l~ 121 (383)
T 3pzg_A 118 IVLV 121 (383)
T ss_dssp EECC
T ss_pred EEcc
Confidence 8874
No 92
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=57.45 E-value=58 Score=26.51 Aligned_cols=27 Identities=37% Similarity=0.473 Sum_probs=18.2
Q ss_pred CCCCeeEeeecCCCCcccEEeeeCCEEEE
Q psy254 106 TKGPEIRTGLLQGGGSAEVELVKGQTIRL 134 (187)
Q Consensus 106 l~GPkIRtG~~~~~~~~~i~l~~G~~v~l 134 (187)
..||+.|+..... -..-.|+.|++|.|
T Consensus 117 s~Gr~~~V~Vsp~--Vd~e~LkPG~rVaL 143 (251)
T 3m9b_A 117 TSGRKMRLTCSPN--IDAASLKKGQTVRL 143 (251)
T ss_dssp CSSSCCEECBCTT--SCTTTSCSSCEEEE
T ss_pred eCCceEEEEeCCC--CCHHHCCCCCEEEe
Confidence 5788888865542 01135888999988
No 93
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=57.33 E-value=22 Score=30.54 Aligned_cols=44 Identities=16% Similarity=0.413 Sum_probs=33.4
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
+.+.+.+|.++|.++.|+-+-. ++..+.+..||+. .++++..|+
T Consensus 48 tv~Qi~~l~~aG~diVRvavp~---~~~a~al~~I~~~-----------~~vPlvaDi 91 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVPH---KEDVEALEEIVKK-----------SPMPVIADI 91 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECCS---HHHHHHHHHHHHH-----------CSSCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEeCCCC---hHHHHHHHHHHhc-----------CCCCEEEeC
Confidence 4688999999999999997753 4445666666654 458889996
No 94
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=56.99 E-value=10 Score=24.97 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=20.2
Q ss_pred CCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 160 VKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 160 v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
-++|..|.|.| .|..+|.++.++.+
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~V 30 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQV 30 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEE
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEE
Confidence 37888999987 78899999887764
No 95
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=56.90 E-value=41 Score=25.24 Aligned_cols=42 Identities=17% Similarity=0.276 Sum_probs=33.9
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+.++.+.++|++.+=+.+...+.++..+.++.+++....++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~ 70 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD 70 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 478899999999998877777788888888888887766544
No 96
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=56.87 E-value=27 Score=29.13 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=37.4
Q ss_pred eEEEecCC-CCCCHHHHHHHHHhcC---------------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 38 GIICTIGP-ASVAVDMLEKIIETGM---------------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 38 kIi~TiGP-as~~~~~i~~li~aGm---------------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
-+.+.+.+ .....+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.+++
T Consensus 367 ~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 367 FLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp EEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 34455633 2344566677777775 468999999 9999999999998876654
No 97
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=55.81 E-value=18 Score=30.04 Aligned_cols=68 Identities=18% Similarity=0.248 Sum_probs=47.6
Q ss_pred CCceEEEec--CCCCC-----------CHHHHHHHHHhcCcEEEEec-CCCC-------HHHHHHHHHHHHHHHHHhCCC
Q psy254 35 RLTGIICTI--GPASV-----------AVDMLEKIIETGMNIARLNF-SHGS-------YEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 35 r~TkIi~Ti--GPas~-----------~~~~i~~li~aGm~v~RiN~-sHg~-------~e~~~~~i~~ir~a~~~~~~~ 93 (187)
.+|.||+-| -|-|- -.+..++|+++|+++.=||. |-.. .+++.+++..|+...+. +
T Consensus 21 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~-- 97 (294)
T 2y5s_A 21 ERPLVMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-N-- 97 (294)
T ss_dssp SSCEEEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-C--
T ss_pred CCceEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-C--
Confidence 458899877 56221 13566889999999999999 4332 57788888777776543 3
Q ss_pred CCCcceeEEEeeCCCCee
Q psy254 94 IGMPHALAIALDTKGPEI 111 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~GPkI 111 (187)
++|.+|+.=|++
T Consensus 98 ------vpiSIDT~~~~V 109 (294)
T 2y5s_A 98 ------VPLSIDTYKPAV 109 (294)
T ss_dssp ------SCEEEECCCHHH
T ss_pred ------CeEEEECCCHHH
Confidence 567889887765
No 98
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=55.73 E-value=27 Score=29.44 Aligned_cols=51 Identities=12% Similarity=0.218 Sum_probs=37.8
Q ss_pred CHHHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHG--SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg--~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
-.+..++++++|.+.+.|++.|. +.++-.++++.||++ .+ ..+.|++|..|
T Consensus 150 ~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g------~~~~l~vDan~ 202 (374)
T 3sjn_A 150 NVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AG------PEMEVQIDLAS 202 (374)
T ss_dssp GHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HC------SSSEEEEECTT
T ss_pred HHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hC------CCCeEEEECCC
Confidence 34677888899999999999973 567666666666655 34 34688899764
No 99
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=55.47 E-value=21 Score=29.63 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=37.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-------------NIARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
+...+ |.....+..+.|.+.|+ +.+||++++-+.++..+.++.++++.++
T Consensus 374 ~~~~~-~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 374 FTVGY-KGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEEE-TTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEec-CCCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 44455 33344567777888875 6799999988999999999999887653
No 100
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=54.01 E-value=60 Score=26.31 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=36.4
Q ss_pred EEEecCCCC-CCHHHHHHHHHh-cC-----------cEEEEec-CCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPAS-VAVDMLEKIIET-GM-----------NIARLNF-SHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas-~~~~~i~~li~a-Gm-----------~v~RiN~-sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
+...+ |.. ...+..+.|.+. |+ +.+||++ ++. +.++..+.++.++++.++.+
T Consensus 325 ~~~~~-~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 325 LGVVI-PQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp EEEEC-CTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEC-CCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 33444 433 334555667776 76 4689998 655 68999999999999988766
No 101
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=53.56 E-value=47 Score=26.49 Aligned_cols=42 Identities=14% Similarity=0.149 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcCcEEEEecCC---------CCHHHHHHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIARLNFSH---------GSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sH---------g~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+.+++++++|++++-|---+ .+.++..+.+..+++..+.++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~ 96 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYG 96 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhC
Confidence 688999999999999987777 457788888899999988876
No 102
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=52.79 E-value=36 Score=27.91 Aligned_cols=52 Identities=10% Similarity=0.117 Sum_probs=36.5
Q ss_pred eEEEecCC-CCCCHHHHHHHHHhcC--------------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 38 GIICTIGP-ASVAVDMLEKIIETGM--------------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 38 kIi~TiGP-as~~~~~i~~li~aGm--------------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
-+.+.+.. .....+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++.
T Consensus 341 ~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 341 FLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp EEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 34455532 2234566667777774 367999998 9999999999998876653
No 103
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=52.78 E-value=49 Score=22.14 Aligned_cols=23 Identities=17% Similarity=0.521 Sum_probs=16.4
Q ss_pred EEeeCcchhh--hcCCCCCEEEEeC
Q psy254 148 DLYVDYTNIT--KVVKPGSRIFVDD 170 (187)
Q Consensus 148 ~i~v~~~~l~--~~v~~Gd~IlidD 170 (187)
..+|+....+ +.++||++|.++.
T Consensus 42 ~~~V~v~~~Vd~~~LkpG~rVaLn~ 66 (85)
T 3h43_A 42 SFLVNVSHFVNPDDLAPGKRVCLNQ 66 (85)
T ss_dssp EEEEEBCTTSCGGGCCTTCEEEECT
T ss_pred eEEEEecCccCHHHCCCCCEEEECC
Confidence 3455544443 5899999999997
No 104
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=52.77 E-value=10 Score=30.09 Aligned_cols=17 Identities=12% Similarity=0.176 Sum_probs=15.0
Q ss_pred HHHHHHHHHhcCcEEEE
Q psy254 50 VDMLEKIIETGMNIARL 66 (187)
Q Consensus 50 ~~~i~~li~aGm~v~Ri 66 (187)
...|+.|.++|||+.|+
T Consensus 40 ~~~l~~~~~~G~N~iR~ 56 (387)
T 4awe_A 40 EKGMTAARAAGLTVFRT 56 (387)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCCEEEe
Confidence 46788899999999998
No 105
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=52.75 E-value=29 Score=25.89 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=14.2
Q ss_pred hhhcCCCCCEEEEeCC
Q psy254 156 ITKVVKPGSRIFVDDG 171 (187)
Q Consensus 156 l~~~v~~Gd~IlidDG 171 (187)
.+.+|++||.|++.+|
T Consensus 110 ~a~~L~~Gd~l~~~~g 125 (168)
T 4e2u_A 110 PAAEVKPGDVVVGVRN 125 (168)
T ss_dssp EGGGCCTTCEEEEEET
T ss_pred EHHHCCCCCEEEeccC
Confidence 4579999999999997
No 106
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=52.72 E-value=57 Score=26.53 Aligned_cols=44 Identities=7% Similarity=0.069 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHh-cC-----------cEEEEec-CCCCHHH-HHHHHHHHHHHHHHhC
Q psy254 48 VAVDMLEKIIET-GM-----------NIARLNF-SHGSYEY-HGQTIKNIRQAVENYS 91 (187)
Q Consensus 48 ~~~~~i~~li~a-Gm-----------~v~RiN~-sHg~~e~-~~~~i~~ir~a~~~~~ 91 (187)
...+..+.|.+. |+ +.+||++ .+.+.++ ..+.++.++++.++++
T Consensus 334 ~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 334 DGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 345566667766 75 5789999 6677777 9999999999888765
No 107
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=51.85 E-value=16 Score=30.74 Aligned_cols=69 Identities=14% Similarity=0.224 Sum_probs=47.9
Q ss_pred CCceEEEecCCCCC-------C----HHHHHHHHHhcCcEEEEecCCC------------CHHHHHHHHHHHHHHHHHhC
Q psy254 35 RLTGIICTIGPASV-------A----VDMLEKIIETGMNIARLNFSHG------------SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 35 r~TkIi~TiGPas~-------~----~~~i~~li~aGm~v~RiN~sHg------------~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+|.||+=|.+.-+ + .+..++|+++|+++.=||.--. ..||+.+++.-|+...+..
T Consensus 26 ~~~~vMGIlNvTpDSFsd~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~- 104 (314)
T 3tr9_A 26 SEPAVMGIINVSPNSFYHPHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF- 104 (314)
T ss_dssp SSCEEEEEEECSTTCSBCBCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCcEEEEEEeCCCCchhhccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-
Confidence 46889987644222 2 2567789999999999997322 1466777777777666553
Q ss_pred CCCCCcceeEEEeeCCCCee
Q psy254 92 KRIGMPHALAIALDTKGPEI 111 (187)
Q Consensus 92 ~~~~~~~~v~I~~Dl~GPkI 111 (187)
.++|.+|+.=|++
T Consensus 105 -------~vpISIDT~~~~V 117 (314)
T 3tr9_A 105 -------PQLISVDTSRPRV 117 (314)
T ss_dssp -------CSEEEEECSCHHH
T ss_pred -------CCeEEEeCCCHHH
Confidence 3788999977765
No 108
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.34 E-value=21 Score=29.73 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCcEEEEecCCCC---HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeE
Q psy254 51 DMLEKIIETGMNIARLNFSHGS---YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIR 112 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~---~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIR 112 (187)
+..++|+++|+++.=+|+.... .+++.+++..|+...+.. .++|++|+.=|++-
T Consensus 41 ~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~--------~vpisIDT~~~~V~ 97 (300)
T 3k13_A 41 SIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIA--------RVPVMIDSSKWEVI 97 (300)
T ss_dssp HHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHH--------TSCEEEECSCHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcC--------CCeEEEeCCCHHHH
Confidence 5677899999999999996553 345666666665432322 37899999777654
No 109
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=50.89 E-value=15 Score=26.15 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=24.0
Q ss_pred EeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEe
Q psy254 149 LYVDYTNITKVVKPGSRIFVDDGLISLVVKSIV 181 (187)
Q Consensus 149 i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~ 181 (187)
+-+++++ .+.+++||.|.+.+..+..+|+.+.
T Consensus 24 iRlnd~k-~~~ikvGD~I~f~~~~l~~~V~~v~ 55 (109)
T 2z0t_A 24 GRLYDEK-RRQIKPGDIIIFEGGKLKVKVKGIR 55 (109)
T ss_dssp EEECCTT-GGGCCTTCEEEEGGGTEEEEEEEEE
T ss_pred EEecchh-hhcCCCCCEEEECCCEEEEEEEEEE
Confidence 3344443 4778999999997559999999875
No 110
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=50.78 E-value=94 Score=24.81 Aligned_cols=44 Identities=14% Similarity=0.285 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHhcC-----------cEEEEecCC-CCHHHHHHHHHHHHHHHHHhC
Q psy254 48 VAVDMLEKIIETGM-----------NIARLNFSH-GSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 48 ~~~~~i~~li~aGm-----------~v~RiN~sH-g~~e~~~~~i~~ir~a~~~~~ 91 (187)
...+..+.|.+.|+ +.+||++++ -+.++..+.++.++++.++.+
T Consensus 325 ~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 325 KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp CHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 44566777888774 468999996 688899999999998877664
No 111
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=50.75 E-value=36 Score=28.91 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=44.7
Q ss_pred CceEEEecCCC-CCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPA-SVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPa-s~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|.. ..++ +..+++.++|.+.+.+...|+..+...++++.||++. + ..+.|++|..|
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G------~d~~l~vDan~ 229 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---G------DEFPLMVDANQ 229 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---C------SSSCEEEECTT
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---C------CCCeEEEECCC
Confidence 44566776433 2244 3456678899999999999888887778888887764 4 33677888754
No 112
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=49.51 E-value=18 Score=29.32 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCcEEEEec-CCCC--H--------------------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 50 VDMLEKIIETGMNIARLNF-SHGS--Y--------------------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~-sHg~--~--------------------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
.+.|+.|-+.|+|++|+-. +.+. + +...+.++.+-+.+++.| +.|++|+
T Consensus 39 ~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~G--------i~vild~ 110 (344)
T 1qnr_A 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHN--------LKLIIPF 110 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHT--------CEEEEES
T ss_pred HHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCC--------CEEEEEe
Confidence 3667778899999999942 2110 0 223455555556666666 7888898
Q ss_pred C
Q psy254 107 K 107 (187)
Q Consensus 107 ~ 107 (187)
-
T Consensus 111 ~ 111 (344)
T 1qnr_A 111 V 111 (344)
T ss_dssp C
T ss_pred c
Confidence 4
No 113
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=48.98 E-value=50 Score=27.47 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=36.0
Q ss_pred EEEecCCCCCCHHH-HHHHHHhcC----------------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDM-LEKIIETGM----------------NIARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGPas~~~~~-i~~li~aGm----------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
+.+.+.+...+.+. .+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 356 LWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp EEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 44556332344553 566777764 5789999988999999999999887654
No 114
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=48.50 E-value=38 Score=27.63 Aligned_cols=50 Identities=12% Similarity=0.202 Sum_probs=35.9
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-----------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-----------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-----------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+...+ |.....+..+.|.+.|+ +.+||++++ +.++..+.++.++++.+++
T Consensus 336 ~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 336 MFVKA-LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCV-DREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp EEEEC-SSSCHHHHHHHHHTTTEECEESGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEc-CCCCHHHHHHHHHHCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 44444 43344556666777776 468999984 8888999999999887664
No 115
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=48.12 E-value=73 Score=23.59 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=24.1
Q ss_pred cCEEeeCcc--hhhhcCCCCCEEEEe--CCeEEEEEEEEe
Q psy254 146 ATDLYVDYT--NITKVVKPGSRIFVD--DGLISLVVKSIV 181 (187)
Q Consensus 146 ~~~i~v~~~--~l~~~v~~Gd~Ilid--DG~i~l~V~~v~ 181 (187)
...|++..| .-+-.-++||.|-+. +|...++|.+|.
T Consensus 117 ~~~IS~~SPlG~ALlGk~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 117 QNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp GTEEESSSHHHHHHTTCBTTCEECC------CCEEEEEEE
T ss_pred CCEEcCCCHHHHHHcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 457888765 234467999999886 888889998885
No 116
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=48.03 E-value=61 Score=27.40 Aligned_cols=52 Identities=10% Similarity=0.147 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCcEEEEecC----CCCH----------------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFS----HGSY----------------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s----Hg~~----------------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|.+.+.|... ||.. ......++.++.+.+..+ ..+.|++|..|
T Consensus 156 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G------~d~~l~vDan~ 227 (410)
T 2gl5_A 156 EAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMG------DDADIIVEIHS 227 (410)
T ss_dssp HHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHC------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcC------CCCEEEEECCC
Confidence 4456678899999999985 6751 233444555555545556 44788889864
No 117
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=47.77 E-value=23 Score=28.42 Aligned_cols=48 Identities=17% Similarity=0.097 Sum_probs=31.1
Q ss_pred eEEEecCCC--CCCHHHHHHHHHhcCcEEEEecCCCCHHH-HHHHHHHHHH
Q psy254 38 GIICTIGPA--SVAVDMLEKIIETGMNIARLNFSHGSYEY-HGQTIKNIRQ 85 (187)
Q Consensus 38 kIi~TiGPa--s~~~~~i~~li~aGm~v~RiN~sHg~~e~-~~~~i~~ir~ 85 (187)
+...|.|.. ..+.+.++.|.++|.|++=+-.|.|...+ ..++++.+|+
T Consensus 9 ~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~ 59 (240)
T 1viz_A 9 WKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR 59 (240)
T ss_dssp CCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT
T ss_pred ceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC
Confidence 334445443 35789999999999999999999887643 5555555554
No 118
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=47.27 E-value=57 Score=26.87 Aligned_cols=47 Identities=13% Similarity=0.285 Sum_probs=33.1
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|...| +.++-.++++.||++ + ..+.|++|-.|
T Consensus 145 ~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~----g------~~~~l~vDan~ 191 (345)
T 2zad_A 145 KEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKV----T------RGAKYIVDANM 191 (345)
T ss_dssp HHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH----S------TTCEEEEECTT
T ss_pred HHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhh----C------CCCeEEEECCC
Confidence 34566788999999999988 455555666666654 4 33677888754
No 119
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=47.22 E-value=36 Score=28.68 Aligned_cols=52 Identities=10% Similarity=0.169 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCcEEEEecCCCC--------------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS--------------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~--------------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|...|+. .......++.++.+.+..+ ..+.|++|..|
T Consensus 143 ~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G------~d~~l~vD~n~ 208 (392)
T 2poz_A 143 RAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAG------PEIELMVDLSG 208 (392)
T ss_dssp HHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHC------TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcC------CCCEEEEECCC
Confidence 3456678899999999999842 1333444555555545556 34688889864
No 120
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=46.94 E-value=73 Score=25.49 Aligned_cols=44 Identities=11% Similarity=0.296 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHh-cC-----------cEEEEec-CCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 48 VAVDMLEKIIET-GM-----------NIARLNF-SHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 48 ~~~~~i~~li~a-Gm-----------~v~RiN~-sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
...+..+.|.+. |+ +.+||++ ++. +.++..+.++.++++.+++.
T Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 332 NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 334566677776 75 4689998 764 89999999999999887765
No 121
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=46.91 E-value=19 Score=29.85 Aligned_cols=68 Identities=18% Similarity=0.325 Sum_probs=47.0
Q ss_pred CCceEEEec--CCCC-----------CCHHHHHHHHHhcCcEEEEec-CCCC-------HHHHHHHHHHHHHHHHHhCCC
Q psy254 35 RLTGIICTI--GPAS-----------VAVDMLEKIIETGMNIARLNF-SHGS-------YEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 35 r~TkIi~Ti--GPas-----------~~~~~i~~li~aGm~v~RiN~-sHg~-------~e~~~~~i~~ir~a~~~~~~~ 93 (187)
.+|+||+-+ -|-| .-.+..++|+++|+++.=||. |-.. .||+.+++..|+...++ +
T Consensus 27 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~-- 103 (294)
T 2dqw_A 27 DRVRLLGVLNLTPDSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-G-- 103 (294)
T ss_dssp SSCEEEEEEECCC-------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-C--
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-C--
Confidence 468899877 5522 125778999999999999999 4222 56778888777776543 3
Q ss_pred CCCcceeEEEeeCCCCee
Q psy254 94 IGMPHALAIALDTKGPEI 111 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~GPkI 111 (187)
+.|.+|+.=|++
T Consensus 104 ------vpiSIDT~~~~V 115 (294)
T 2dqw_A 104 ------VPVSVDTRKPEV 115 (294)
T ss_dssp ------SCEEEECSCHHH
T ss_pred ------CeEEEECCCHHH
Confidence 567889877765
No 122
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=46.51 E-value=33 Score=28.76 Aligned_cols=63 Identities=8% Similarity=-0.002 Sum_probs=39.9
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASV--AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|-.+. -.+..+++.++|.+.+.|++.| +.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g------~d~~l~vDan~ 198 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPL---LE------PGEKAMADANQ 198 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGG---SC------TTCEEEEECTT
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHh---cC------CCCEEEEECCC
Confidence 3445577753211 2345567889999999999998 455555555555544 44 33677888754
No 123
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=46.21 E-value=37 Score=28.62 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=42.7
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+.+|+|... ++ +..+++.++|.+.+.|++.+.+.+. .++++.||++. + ..+.|++|..|
T Consensus 152 ~vp~~~~~g~~~-~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~---g------~d~~l~vDan~ 217 (388)
T 2nql_A 152 SFPAYVSGLPER-TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVL---G------PQAKIAADMHW 217 (388)
T ss_dssp EEEEEEECCCCS-SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHH---C------TTSEEEEECCS
T ss_pred ceEeeEEeCCCC-CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHh---C------CCCEEEEECCC
Confidence 456677886432 44 3446678899999999998755666 77777777654 4 34678888753
No 124
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=45.74 E-value=19 Score=25.75 Aligned_cols=24 Identities=33% Similarity=0.484 Sum_probs=20.3
Q ss_pred hhcCCCCCEEEEeCCeEEEEEEEEe
Q psy254 157 TKVVKPGSRIFVDDGLISLVVKSIV 181 (187)
Q Consensus 157 ~~~v~~Gd~IlidDG~i~l~V~~v~ 181 (187)
.+.+++||.|.+.+ .+..+|+++.
T Consensus 32 ~~~i~vGD~I~f~~-~l~~~V~~v~ 55 (113)
T 1xne_A 32 LKDIKRGDKIIFND-LIPAEVVEVK 55 (113)
T ss_dssp TTTCCTTCEEEETT-TEEEEEEEEE
T ss_pred hhccCCCCEEEEcc-ceEEEEEEEE
Confidence 36679999999988 8888988875
No 125
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=45.50 E-value=12 Score=32.76 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=61.3
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH---------------------HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE---------------------YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e---------------------~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...=|.-|
T Consensus 40 lpTI~~ll~~Gakvil--~SHlGRPkg~~~~~~~~~~~~~~~~~~~~~~SL~pva~~Ls~lLg------~~V~f~~d~~G 111 (415)
T 16pk_A 40 LPTLKKVLTEGGSCVL--MSHLGRPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLL------RPVTFAPDCLN 111 (415)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSCCCCBCGGGHHHHHHTTCCTTCCGGGCSHHHHHHHHHHHT------SCCEEESCTTS
T ss_pred HHHHHHHHHCCCEEEE--EecCCCCCCcccccccccccccccccCCcccCHHHHHHHHHHHhC------CCCeeCCccCC
Confidence 3799999999999765 7985522 22222333345666667 78888889999
Q ss_pred CeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCc----chhhhcCCCCCEEEEeCC
Q psy254 109 PEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDY----TNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 109 PkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~----~~l~~~v~~Gd~IlidDG 171 (187)
|+.++.. |+.|+.+.|-.-.=|..+.. +. ++|.+.+..---||++|.
T Consensus 112 ~~~~v~~----------l~~G~VlLLEN~RF~~~E~~------nd~~e~~~fa~~LA~l~DvyVNDA 162 (415)
T 16pk_A 112 AADVVSK----------MSPGDVVLLENVRFYKEEGS------KKAKDREAMAKILASYGDVYISDA 162 (415)
T ss_dssp CHHHHHT----------CCTTCEEEECCGGGBGGGGC------SSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hHHHhhc----------CCCCcEEEeccccCCccccc------CCccccHHHHHHHHhhCCEEEEcc
Confidence 9988322 45555555432211111111 33 678887777777898884
No 126
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=45.32 E-value=62 Score=25.59 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=47.4
Q ss_pred CCceEEEec-----CCCCCC-HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcce-eEEEeeCC
Q psy254 35 RLTGIICTI-----GPASVA-VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHA-LAIALDTK 107 (187)
Q Consensus 35 r~TkIi~Ti-----GPas~~-~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~-v~I~~Dl~ 107 (187)
..+|||++- .|+..+ .+.+++|.+.|.|+++|-.---+.++..++++..+++..... .| +++.|--.
T Consensus 124 ~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~------~P~I~~~MG~~ 197 (238)
T 1sfl_A 124 YNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMD------CKVVGISMSKL 197 (238)
T ss_dssp TTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCS------SEEEEEECTGG
T ss_pred cCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHhhcCC------CCEEEEECCCC
Confidence 469999986 233211 345666777999999999888888888888888777633222 45 45555444
Q ss_pred CCeeE
Q psy254 108 GPEIR 112 (187)
Q Consensus 108 GPkIR 112 (187)
|.--|
T Consensus 198 G~~SR 202 (238)
T 1sfl_A 198 GLISR 202 (238)
T ss_dssp GHHHH
T ss_pred chHHH
Confidence 44444
No 127
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=45.12 E-value=70 Score=26.95 Aligned_cols=52 Identities=13% Similarity=0.250 Sum_probs=33.5
Q ss_pred HHHHHHHHhcCcEEEEecC----CCCH-----------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFS----HGSY-----------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s----Hg~~-----------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|... ||.. ......++.++.+.+..+ ..+.|++|..|
T Consensus 152 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG------~d~~l~vDan~ 218 (403)
T 2ox4_A 152 EEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVG------PDVDIIVENHG 218 (403)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHC------TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhC------CCCeEEEECCC
Confidence 4456678899999999975 6741 233444444544444456 34688889864
No 128
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=44.78 E-value=72 Score=25.54 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=50.3
Q ss_pred CCCceEEEec-----CCCCCC-HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcce-eEEEeeC
Q psy254 34 VRLTGIICTI-----GPASVA-VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHA-LAIALDT 106 (187)
Q Consensus 34 ~r~TkIi~Ti-----GPas~~-~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~-v~I~~Dl 106 (187)
...+|||++- .|+..+ .+.+++|.+.|.|+++|-.---+.++..++++..+++..... .| +++.|--
T Consensus 137 ~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~------~P~I~~~MG~ 210 (257)
T 2yr1_A 137 ECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELA------IPLITMAMGG 210 (257)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCS------SCEEEEECTT
T ss_pred hCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCC------CCEEEEECCC
Confidence 3468999986 243211 345677888999999999888889989888888777633222 44 4666665
Q ss_pred CCCeeEe
Q psy254 107 KGPEIRT 113 (187)
Q Consensus 107 ~GPkIRt 113 (187)
.|.--|+
T Consensus 211 ~G~~SRi 217 (257)
T 2yr1_A 211 LGAITRL 217 (257)
T ss_dssp TTHHHHH
T ss_pred CcchHHH
Confidence 5655553
No 129
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=44.64 E-value=96 Score=24.51 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=24.2
Q ss_pred cEEEEecCCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 62 NIARLNFSHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 62 ~v~RiN~sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.+||++++. +.++..+.++.++++.+++.
T Consensus 344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~ 374 (382)
T 4hvk_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5689999854 67889999999998877654
No 130
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=44.49 E-value=71 Score=26.93 Aligned_cols=52 Identities=8% Similarity=0.135 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCcEEEEecC----CCC-----------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFS----HGS-----------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s----Hg~-----------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|... ||. .......++.++.+.+..+ ..+.|++|..|
T Consensus 158 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G------~d~~l~vDan~ 224 (407)
T 2o56_A 158 QAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVG------PDVDIIAEMHA 224 (407)
T ss_dssp HHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHC------TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcC------CCCEEEEECCC
Confidence 3456678899999999986 464 1233444445554444556 34688899764
No 131
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B
Probab=44.46 E-value=32 Score=29.55 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=35.0
Q ss_pred cCCCC-CCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 43 IGPAS-VAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 43 iGPas-~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+||-+ .++ ..++.|-++|.|+|=+|..... +...+.+..+.+++++++
T Consensus 94 lG~ysS~D~~v~~~hi~~ak~aGIDgfal~w~~~~-~~~d~~l~~~~~aA~~~g 146 (382)
T 4acy_A 94 LGTYSSNDPEIIRKHIRMHIKANVGVLSVTWWGES-DYGNQSVSLLLDEAAKVG 146 (382)
T ss_dssp TCSCCTTCHHHHHHHHHHHHHHTEEEEEEEECGGG-GTTCHHHHHHHHHHHHHT
T ss_pred cccccCCCHHHHHHHHHHHHHcCCCEEEEEecCCC-CchHHHHHHHHHHHHHcC
Confidence 68844 455 5567799999999999986411 122368899999988888
No 132
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=44.24 E-value=46 Score=29.87 Aligned_cols=42 Identities=7% Similarity=0.180 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+.+++++++|++++-|-.-+.+.++..+.++.+++..+.++
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~ 69 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHN 69 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcC
Confidence 589999999999999999999999999999999999998876
No 133
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=43.94 E-value=43 Score=28.40 Aligned_cols=52 Identities=27% Similarity=0.348 Sum_probs=38.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC---------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 39 IICTIGPASVAVDMLEKIIETGM---------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm---------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+.+.+.+..+..+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.++.
T Consensus 379 ~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 379 IWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp EEEECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 45566322344567778888774 46899999888999999999998876653
No 134
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=43.30 E-value=37 Score=28.50 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=45.2
Q ss_pred CCceEEEec--CCCCC-------C----HHHHHHHHHhcCcEEEEecCC---C----CHHHHHHHHHHHHHHHHHhCCCC
Q psy254 35 RLTGIICTI--GPASV-------A----VDMLEKIIETGMNIARLNFSH---G----SYEYHGQTIKNIRQAVENYSKRI 94 (187)
Q Consensus 35 r~TkIi~Ti--GPas~-------~----~~~i~~li~aGm~v~RiN~sH---g----~~e~~~~~i~~ir~a~~~~~~~~ 94 (187)
.+++||+-| -|-|- + .+..++|+++|+++.=||.-- | ..||+.+++-.|+...+++.
T Consensus 40 ~~~~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~--- 116 (318)
T 2vp8_A 40 DRALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP--- 116 (318)
T ss_dssp SSCEEEEEEC--------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST---
T ss_pred CCcEEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC---
Confidence 467999988 44111 1 356688999999999999732 1 25677777777777666541
Q ss_pred CCcceeEEEeeCCCCee
Q psy254 95 GMPHALAIALDTKGPEI 111 (187)
Q Consensus 95 ~~~~~v~I~~Dl~GPkI 111 (187)
.+.|.+|+.=|++
T Consensus 117 ----~vpISIDT~~~~V 129 (318)
T 2vp8_A 117 ----DQLISVDTWRAQV 129 (318)
T ss_dssp ----TCEEEEECSCHHH
T ss_pred ----CCeEEEeCCCHHH
Confidence 3678889887765
No 135
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=42.90 E-value=54 Score=26.59 Aligned_cols=46 Identities=9% Similarity=0.173 Sum_probs=32.0
Q ss_pred EEEecCCCCCCHHHHHHHHH-hcC-------------------cEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIE-TGM-------------------NIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~-aGm-------------------~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+...+ |.....+..+.|++ .|+ +.+||++++ +.++..+.++.++++
T Consensus 329 ~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 329 IWLKV-PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAAEDIVSL 394 (396)
T ss_dssp EEEEC-TTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred EEEEC-CCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 44455 33344566677765 475 679999998 888888888887764
No 136
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=42.90 E-value=58 Score=27.53 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=41.1
Q ss_pred ceEEEec-CCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTI-GPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~Ti-GPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
...-+|+ |. ..++ +..+++++.|-+.+.|++.+ +.++-.++++.||++ .+ ..+.|++|..|
T Consensus 139 v~~y~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a---~g------~d~~l~vDan~ 204 (389)
T 3ozy_A 139 VRAYASSIYW-DLTPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQR---VG------ADVEILVDANQ 204 (389)
T ss_dssp EEEEEEEECS-SCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH---HC------TTSEEEEECTT
T ss_pred eeeEEecCCC-CCCHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHH---cC------CCceEEEECCC
Confidence 5677777 52 2233 34566778899999999987 566666666666654 44 34678889754
No 137
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=42.01 E-value=73 Score=26.92 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=40.6
Q ss_pred ceEEEecCCC--CCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE-eeCCC
Q psy254 37 TGIICTIGPA--SVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA-LDTKG 108 (187)
Q Consensus 37 TkIi~TiGPa--s~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~-~Dl~G 108 (187)
...-+|+|.. ..++ +..+++++.|.+.+.+++.+ +.++-.++++.||++ .+ ..+.|+ +|..|
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~-~~~~d~~~v~avR~a---~g------~~~~l~~vDan~ 196 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK-NLDADEEFLSRVKEE---FG------SRVRIKSYDFSH 196 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHHH---HG------GGCEEEEEECTT
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC-CHHHHHHHHHHHHHH---cC------CCCcEEEecCCC
Confidence 3446777621 2233 34466788999999999987 566666666666655 34 346788 88754
No 138
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=41.94 E-value=68 Score=26.12 Aligned_cols=51 Identities=14% Similarity=0.262 Sum_probs=36.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC---------------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM---------------NIARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm---------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
+...+.+.....+..+.|.+.|+ +.+||++++-+.++..+.++.++++.++
T Consensus 327 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 327 VWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp EEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 34455322234566677877774 4579999988889999999999887654
No 139
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=41.73 E-value=17 Score=29.58 Aligned_cols=35 Identities=29% Similarity=0.306 Sum_probs=27.5
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCC
Q psy254 36 LTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg 71 (187)
+-+=+|++-|.. ..+.|+.|.+.|+..+|+|+..+
T Consensus 96 r~~Gva~vdp~~-~~~eL~~l~~~G~rGvR~~~~~~ 130 (303)
T 4d9a_A 96 KARGIAVVDPAI-DEAELAALHEGGMRGIRFNFLKR 130 (303)
T ss_dssp SEEEEECCCTTC-CHHHHHHHHHTTEEEEEEECCTT
T ss_pred cEEEEEEeCCCC-CHHHHHHHHHCCCCEEEeecccC
Confidence 345566786644 57899999999999999999755
No 140
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=41.52 E-value=56 Score=27.58 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=34.4
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|.+.+.|+..|.+.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 155 ~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G------~d~~l~vDan~ 203 (391)
T 2qgy_A 155 RQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREI---VG------DELPLMLDLAV 203 (391)
T ss_dssp HHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHH---HC------SSSCEEEECCC
T ss_pred HHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHH---hC------CCCEEEEEcCC
Confidence 345667889999999998876555556666666655 45 34678888864
No 141
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=41.06 E-value=78 Score=25.90 Aligned_cols=70 Identities=19% Similarity=0.277 Sum_probs=45.0
Q ss_pred CCCceEEEec--CCCCC-------C----HHHHHHHHHhcCcEEEEec-------CCCC-HHHHHHHHHHHHHHHHHhCC
Q psy254 34 VRLTGIICTI--GPASV-------A----VDMLEKIIETGMNIARLNF-------SHGS-YEYHGQTIKNIRQAVENYSK 92 (187)
Q Consensus 34 ~r~TkIi~Ti--GPas~-------~----~~~i~~li~aGm~v~RiN~-------sHg~-~e~~~~~i~~ir~a~~~~~~ 92 (187)
..+|+||+-| -|-|- + .+..++|+++|+++.=|.- ..-+ .||+.+++--|+... +
T Consensus 4 l~r~~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~-~--- 79 (270)
T 4hb7_A 4 MTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIV-G--- 79 (270)
T ss_dssp -CCCEEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHT-T---
T ss_pred CCCCeEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhh-c---
Confidence 5688999987 45221 1 3667889999999998863 3333 455666665555543 2
Q ss_pred CCCCcceeEEEeeCCCCeeE
Q psy254 93 RIGMPHALAIALDTKGPEIR 112 (187)
Q Consensus 93 ~~~~~~~v~I~~Dl~GPkIR 112 (187)
..+.|-+||-=|++-
T Consensus 80 -----~~v~iSIDT~~~~Va 94 (270)
T 4hb7_A 80 -----FDVKISVDTFRSEVA 94 (270)
T ss_dssp -----SSSEEEEECSCHHHH
T ss_pred -----CCCeEEEECCCHHHH
Confidence 347889999877763
No 142
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=40.80 E-value=94 Score=26.54 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=41.5
Q ss_pred CceEEEecCCC-------CCCHHH----HHHHHHhcCcEEEEecCCC---------CHHHHHHHHHHHHHHHHHhCCCCC
Q psy254 36 LTGIICTIGPA-------SVAVDM----LEKIIETGMNIARLNFSHG---------SYEYHGQTIKNIRQAVENYSKRIG 95 (187)
Q Consensus 36 ~TkIi~TiGPa-------s~~~~~----i~~li~aGm~v~RiN~sHg---------~~e~~~~~i~~ir~a~~~~~~~~~ 95 (187)
+....+++++. ..+++. .+++++.|.+.+.++.... +.+...+-++.++.+.+..+
T Consensus 124 ~v~~yas~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G---- 199 (412)
T 4e4u_A 124 RLRSYTYLYPKNAKGEYDYDDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVG---- 199 (412)
T ss_dssp SEEEEEECCCBCTTSCBCSSCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHT----
T ss_pred eeEEEEeccCCcccccccCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhC----
Confidence 34556666542 234443 5667889999999997532 22334555555665555666
Q ss_pred CcceeEEEeeCCC
Q psy254 96 MPHALAIALDTKG 108 (187)
Q Consensus 96 ~~~~v~I~~Dl~G 108 (187)
..+.|++|.-|
T Consensus 200 --~d~~l~vDaN~ 210 (412)
T 4e4u_A 200 --SKADLLFGTHG 210 (412)
T ss_dssp --TSSEEEECCCS
T ss_pred --CCCeEEEECCC
Confidence 44688899764
No 143
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=40.75 E-value=67 Score=26.65 Aligned_cols=48 Identities=15% Similarity=0.300 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|++.| +.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 147 ~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g------~~~~l~vDan~ 194 (369)
T 2p8b_A 147 EEAASMIQKGYQSFKMKVGT-NVKEDVKRIEAVRER---VG------NDIAIRVDVNQ 194 (369)
T ss_dssp HHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHH---HC------TTSEEEEECTT
T ss_pred HHHHHHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHH---hC------CCCeEEEECCC
Confidence 34566788999999999987 455566666666665 44 33577888754
No 144
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=40.68 E-value=80 Score=25.98 Aligned_cols=52 Identities=12% Similarity=0.194 Sum_probs=41.8
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
++.-+ ....+.+.+.+.+++|.+-..|..||-+.++..+.-..+-+.+...|
T Consensus 77 ValHl-DHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~g 128 (286)
T 1gvf_A 77 LALHL-DHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQD 128 (286)
T ss_dssp BEEEE-EEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEc-CCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 33333 44467999999999999999999999999988877777777777665
No 145
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=40.44 E-value=78 Score=20.92 Aligned_cols=42 Identities=10% Similarity=0.178 Sum_probs=36.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSK 92 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~ 92 (187)
+.=+.|.+||.+-..|..|--..+...+.++.|-+..+.+|.
T Consensus 37 elekalaragarnvqitisaendeqakelleliarllqklgy 78 (96)
T 2jvf_A 37 ELEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGY 78 (96)
T ss_dssp HHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHHHhCC
Confidence 344568899999999999999999999999999999888884
No 146
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=40.31 E-value=41 Score=27.12 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=30.8
Q ss_pred CCHHHHHHHHH-hcC---------------cEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy254 48 VAVDMLEKIIE-TGM---------------NIARLNFSHGSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 48 ~~~~~i~~li~-aGm---------------~v~RiN~sHg~~e~~~~~i~~ir~a~~ 88 (187)
...+..+.|.+ .|+ +.+||++++ +.++..+.++.++++.+
T Consensus 318 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 318 NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYRE 373 (376)
T ss_dssp CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHH
Confidence 34566677877 776 457999997 99999999998887654
No 147
>1t3o_A Carbon storage regulator; CSRA, CSRB, CSRC, mostly beta strands, RNA binding protein, beta sheet surface; NMR {Bacillus subtilis}
Probab=40.26 E-value=10 Score=26.37 Aligned_cols=30 Identities=13% Similarity=0.008 Sum_probs=23.0
Q ss_pred hhhhcCCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 155 NITKVVKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 155 ~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
.|+-.-++|..|.|.| .|..+|.++.++.+
T Consensus 22 MLVLtRK~GEsI~IGd-dI~ItVl~i~g~qV 51 (95)
T 1t3o_A 22 MLVLSRKINEAIQIGA-DIEVKVIAVEGDQV 51 (95)
T ss_dssp EEEEECTTCCCEEETT-TEEECCCEECSSCE
T ss_pred eEEEEccCCCeEEECC-CEEEEEEEEeCCEE
Confidence 3444568899999988 78888888877654
No 148
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=40.24 E-value=75 Score=26.12 Aligned_cols=55 Identities=11% Similarity=0.066 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCcEEEEec---CCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCee
Q psy254 51 DMLEKIIETGMNIARLNF---SHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEI 111 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~---sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkI 111 (187)
...++.+++|++++-+=. +..+..+..+.+..+.+.+.+++ .|+-+.+...|+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G------~p~lv~~~~~g~~v 169 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG------LLSIIEPVVRPPRC 169 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT------CEEEEEEEECCCSS
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC------CcEEEEEECCCCcc
Confidence 456778889999887333 23224555556666666666677 66666666677764
No 149
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=40.23 E-value=73 Score=26.85 Aligned_cols=62 Identities=11% Similarity=0.311 Sum_probs=43.6
Q ss_pred ceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+-+|+|-.+ ...+..+++++.|-+.+.+.+...+.++-.++++.||++. . .+.+++|.-|
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~---------~~~l~vDan~ 201 (385)
T 3i6e_A 138 IPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-P---------EFRVRVDYNQ 201 (385)
T ss_dssp EEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-T---------TSEEEEECTT
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-C---------CCeEEEECCC
Confidence 34556775322 1124556778899999999998888788888888888775 1 2578888654
No 150
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=39.97 E-value=98 Score=26.28 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=32.4
Q ss_pred HHHHHHhcCcEEEEecCCC---------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 53 LEKIIETGMNIARLNFSHG---------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 53 i~~li~aGm~v~RiN~sHg---------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+++++.|.+.+.++.... +.+...+-++.+|.+.+..+ ..+.|++|.-|
T Consensus 159 a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G------~d~~l~vDan~ 217 (404)
T 4e5t_A 159 AAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVG------TKADLLFGTHG 217 (404)
T ss_dssp HHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHG------GGSEEEECCCS
T ss_pred HHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcC------CCCeEEEeCCC
Confidence 4567788999999987532 22334455555555555555 44688899764
No 151
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=39.92 E-value=33 Score=24.46 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=25.3
Q ss_pred EeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCe
Q psy254 125 ELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGL 172 (187)
Q Consensus 125 ~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~ 172 (187)
.++.|.+++.|.+-.+... .. | ..+..|++||.|++-+|.
T Consensus 60 ~t~~G~~i~~T~~H~~~t~---~g-w----~~a~~L~~Gd~v~~~~~~ 99 (139)
T 2in0_A 60 RIAGGAILWATPDHKVLTE---YG-W----RAAGELRKGDRVAVRDVE 99 (139)
T ss_dssp EETTSCEEEECTTCEEEET---TE-E----EEGGGCCTTCEEEEECTT
T ss_pred EeCCCCEEEecCCCeEEec---CC-c----EEHHHCCCCCEEEeCCCc
Confidence 3446777777765443211 00 2 245789999999999884
No 152
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=39.88 E-value=61 Score=26.31 Aligned_cols=52 Identities=8% Similarity=0.232 Sum_probs=36.2
Q ss_pred EEEecCC-CCCCHHHHHHHHHh-cC--------------cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGP-ASVAVDMLEKIIET-GM--------------NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGP-as~~~~~i~~li~a-Gm--------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+...+.+ .....+..+.|++. |+ +.+||++++ +.++..+.++.++++.++..
T Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 316 VYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp EEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC-
T ss_pred EEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhc
Confidence 4445533 23344566777775 64 369999999 78889999999998877654
No 153
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=39.74 E-value=51 Score=25.48 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=27.9
Q ss_pred EEeeCcc-hhhhcCCCCCEEEEeCCeEEEEEEEEeCCee
Q psy254 148 DLYVDYT-NITKVVKPGSRIFVDDGLISLVVKSIVKSYQ 185 (187)
Q Consensus 148 ~i~v~~~-~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i 185 (187)
.+.+..| .++++++.||.|-+|. ++|+|.+++++..
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f 59 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMV 59 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEE
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEE
Confidence 4555443 4788999999999985 7999999987753
No 154
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=39.66 E-value=23 Score=26.79 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=25.0
Q ss_pred EEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeC
Q psy254 124 VELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDD 170 (187)
Q Consensus 124 i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidD 170 (187)
+.++.|.+|++|.+-.+....+....+ -.+..|++||.|.+-+
T Consensus 79 I~t~~G~~I~~T~~H~~~v~~~g~~~~----~~A~eLk~GD~v~v~~ 121 (185)
T 2lcj_A 79 FELEDGRSFETTVDHPVLVYENGRFIE----KRAFEVKEGDKVLVSE 121 (185)
T ss_dssp EEETTSCEEEECSSSEEEEEETTEEEE----EEGGGCCTTCEEEECC
T ss_pred EEECCCCEEEECCCCEEEEecCCeEEE----EEHHHCCCCCEEEEcc
Confidence 444557777777654322111111122 2467899999999876
No 155
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=39.59 E-value=1.1e+02 Score=25.95 Aligned_cols=52 Identities=17% Similarity=0.371 Sum_probs=33.8
Q ss_pred HHHHHHHHhcCcEEEEecC--CCC-----------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFS--HGS-----------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s--Hg~-----------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.+.++ ||. .......++.++.+.+..+ ..+.|++|..|
T Consensus 155 ~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G------~d~~l~vDan~ 219 (410)
T 2qq6_A 155 AVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVG------PEVEVAIDMHG 219 (410)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHC------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcC------CCCEEEEECCC
Confidence 4556788899999999994 664 1233444455554444456 34688889864
No 156
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=39.33 E-value=50 Score=29.10 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=35.8
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 41 CTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+++ ....+.++.|+++|+++.=+..+||....+.+.++.+|+.
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~ 280 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREK 280 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred cccCc-hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHh
Confidence 45566 4446779999999999999999999888777777777765
No 157
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=39.28 E-value=85 Score=26.27 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=45.6
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASV--AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+...-+|+|-.+. ..+..+++.+.|-+.+.+.+...+.++-.+.++.+|++.. | ..+.+++|--+
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~--g------~~~~l~vDaN~ 205 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVR--G------TGIALAADGNR 205 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHHT--T------SCCEEEEECTT
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHHHHHHhhcc--C------CeeEEEEeecc
Confidence 3455677765432 2345667888999999999998887777777777776542 3 34788999765
No 158
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=39.19 E-value=1.5e+02 Score=23.76 Aligned_cols=53 Identities=8% Similarity=0.094 Sum_probs=37.2
Q ss_pred EEEecCCCCCCHHHHHHHHHh-cC-----------cEEEEe-cC-CCCHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPASVAVDMLEKIIET-GM-----------NIARLN-FS-HGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~a-Gm-----------~v~RiN-~s-Hg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+...+.......+..+.|.+. |+ +.+||+ ++ +-+.++..+.++.++++.++++
T Consensus 306 ~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 306 TAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 345552122345666778776 74 467999 56 6789999999999999888766
No 159
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=38.77 E-value=58 Score=27.63 Aligned_cols=62 Identities=13% Similarity=0.197 Sum_probs=40.6
Q ss_pred CceEEEecCCC-CCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPA-SVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPa-s~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+| |.. ..-.+..+++++.|-+.+.|.+.+ +.++-.++++.||++ .+ ..+.+++|..|
T Consensus 146 ~v~~y~~-g~~~e~~~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a---~g------~~~~l~vDaN~ 208 (392)
T 3ddm_A 146 RIGVYAS-GINPENPEDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVREL---LG------AATPLMADANQ 208 (392)
T ss_dssp EEEEEEE-EECSSSHHHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHH---HC------SSSCEEEECTT
T ss_pred ceeEEee-cCCHHHHHHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHh---cC------CCceEEEeCCC
Confidence 3344444 322 333567788899999999999987 555555555555554 45 34678889754
No 160
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=38.55 E-value=74 Score=26.44 Aligned_cols=49 Identities=16% Similarity=0.162 Sum_probs=32.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHH
Q psy254 35 RLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNI 83 (187)
Q Consensus 35 r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~i 83 (187)
..++|.+=.=|.....+.++...++|++.+|+.++-...+...+.++..
T Consensus 81 ~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~a 129 (345)
T 1nvm_A 81 SHAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYA 129 (345)
T ss_dssp SSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHH
T ss_pred CCCEEEEEecCCcccHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHH
Confidence 3566665313655678999999999999999986544444444444433
No 161
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=38.47 E-value=25 Score=30.81 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=38.1
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEEEEecCC---C-------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 41 CTIGPASVAVDMLEKIIETGMNIARLNFSH---G-------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~v~RiN~sH---g-------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+-+......+.++.|-+.|+|++||-+.. + .++...+.++.+=+.+.+.| +.+++|+-.
T Consensus 33 ~~~w~~~~~~~d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~vv~~a~~~G--------l~VIlD~H~ 102 (491)
T 2y8k_A 33 STEWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELG--------LYLVITIGN 102 (491)
T ss_dssp ECSSSCCCCHHHHGGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHHHHHHHHHHHHT--------CEEEEEEEC
T ss_pred cCCcCCCCCHHHHHHHHHcCCCEEEECceeecccccCCCccChhHHHHHHHHHHHHHHHCC--------CEEEEECCC
Confidence 333333345688888999999999997531 1 11234556666656666666 678888753
No 162
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=38.35 E-value=39 Score=27.28 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCcEEEEecCCC---CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEee
Q psy254 51 DMLEKIIETGMNIARLNFSHG---SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRTG 114 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg---~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG 114 (187)
+..++|+++|+++.=||.... ..|++.+++..|++ . ..++|.+|+.=|++---
T Consensus 29 ~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~---~--------~~~pisIDT~~~~v~~a 84 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQE---V--------SNLTLCLDSTNIKAIEA 84 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHT---T--------CCSEEEEECSCHHHHHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHH---h--------CCCeEEEeCCCHHHHHH
Confidence 567889999999999998422 34455555555553 1 24788999988876543
No 163
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=38.23 E-value=1e+02 Score=24.29 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHhcC----------cEEEEecCCC-CHHHHHHHHHHHHHHHH
Q psy254 48 VAVDMLEKIIETGM----------NIARLNFSHG-SYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 48 ~~~~~i~~li~aGm----------~v~RiN~sHg-~~e~~~~~i~~ir~a~~ 88 (187)
...+..+.|.+.|+ +.+||++++. +.++..+.++.++++.+
T Consensus 312 ~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 312 RFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp CHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 34566677888775 3589999876 58888888888887643
No 164
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=37.96 E-value=76 Score=25.26 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=33.5
Q ss_pred EEecC-CC-CCCHHHHHHHHHhcCcEEEEecCCCCH-HHHHHHHHHHHH
Q psy254 40 ICTIG-PA-SVAVDMLEKIIETGMNIARLNFSHGSY-EYHGQTIKNIRQ 85 (187)
Q Consensus 40 i~TiG-Pa-s~~~~~i~~li~aGm~v~RiN~sHg~~-e~~~~~i~~ir~ 85 (187)
..|.| |. ..+.+.++.|.++|.|+.=|-.|+|.. +...++++.+|+
T Consensus 11 ~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~ 59 (234)
T 2f6u_A 11 HITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ 59 (234)
T ss_dssp EEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT
T ss_pred EEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC
Confidence 34444 43 357899999999999999999998864 445566666654
No 165
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=37.94 E-value=64 Score=24.46 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHH---HHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYEYH---GQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e~~---~~~i~~ir~a~~~~~ 91 (187)
.+.++.++++|++.+=+.+-.++..+. .++++.+++..+.++
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 78 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAG 78 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcC
Confidence 568999999999998877766777766 777888877766655
No 166
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=37.47 E-value=89 Score=25.75 Aligned_cols=53 Identities=13% Similarity=0.231 Sum_probs=41.7
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+..-+ ....+.+.+.+.+++|.+-..|..||-+.++..+.-..+-+.+...|
T Consensus 82 PValHl-DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~g 134 (288)
T 3q94_A 82 PVAIHL-DHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARN 134 (288)
T ss_dssp CEEEEE-EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred cEEEEC-CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 344444 45568999999999999999999999999887777776666666555
No 167
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=37.22 E-value=1.5e+02 Score=23.40 Aligned_cols=50 Identities=10% Similarity=0.116 Sum_probs=36.5
Q ss_pred EecCCCCCCHHHHHHHHHhcC----------cEEEEecC-CCCHHHHHHHHHHHHHHHHHhC
Q psy254 41 CTIGPASVAVDMLEKIIETGM----------NIARLNFS-HGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm----------~v~RiN~s-Hg~~e~~~~~i~~ir~a~~~~~ 91 (187)
..+ |.....+..+.|.+.|+ +.+||++. +-+.++..+.++.++++.++.+
T Consensus 304 ~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 304 VIL-KVADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp EEC-SSSCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEC-CCCCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 444 43344566777877776 56899955 5578889999999999888765
No 168
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=36.84 E-value=83 Score=26.57 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=44.5
Q ss_pred CCceEEEecCCCCCCH----HHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 35 RLTGIICTIGPASVAV----DMLEKIIET-GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 35 r~TkIi~TiGPas~~~----~~i~~li~a-Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+....+|+|- .++ +..+++++. |-+.+.+.....+.++-.++++.||++. + ..+.+++|.-|
T Consensus 155 ~~v~~y~s~g~--~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~---G------~~~~l~vDaN~ 222 (383)
T 3toy_A 155 RPIPAYDSYGV--LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL---G------PDIALMLDFNQ 222 (383)
T ss_dssp CCEEEEEECSS--CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH---C------TTSEEEEECTT
T ss_pred CceEEeEecCC--CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh---C------CCCeEEEeCCC
Confidence 34566777764 333 345667778 9999999998877787777777777653 4 34688889754
No 169
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=36.79 E-value=60 Score=26.12 Aligned_cols=42 Identities=24% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCHHHHHHHH-HhcC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 48 VAVDMLEKII-ETGM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 48 ~~~~~i~~li-~aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
...+..+.|. +.|+ +.+||++++ +.++..+.++.++++.+++
T Consensus 334 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 334 NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 3455666676 7776 568999996 8888889999998877653
No 170
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=36.40 E-value=1.4e+02 Score=23.85 Aligned_cols=75 Identities=12% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCCceEEEec----C-CCCCC-HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcce-eEEEeeC
Q psy254 34 VRLTGIICTI----G-PASVA-VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHA-LAIALDT 106 (187)
Q Consensus 34 ~r~TkIi~Ti----G-Pas~~-~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~-v~I~~Dl 106 (187)
...||||++- + |+..+ .+.+.+|...|.|++.|-..--+.++..++++..+++...+.. +| +++.|--
T Consensus 137 ~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~-----~P~I~~~MG~ 211 (258)
T 4h3d_A 137 KKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYAD-----RPIITMSMSG 211 (258)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCS-----SCBEEEECTG
T ss_pred hCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCC-----CCEEEEeCCC
Confidence 3568999987 1 22211 2567788999999999999888999999999888887666532 44 4666655
Q ss_pred CCCeeEe
Q psy254 107 KGPEIRT 113 (187)
Q Consensus 107 ~GPkIRt 113 (187)
.|.--|+
T Consensus 212 ~G~~SRi 218 (258)
T 4h3d_A 212 MGVISRL 218 (258)
T ss_dssp GGGGGGT
T ss_pred CChHHHH
Confidence 5555553
No 171
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=36.23 E-value=87 Score=26.30 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=42.6
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.++.-+ ....+.+.+.+.+++|.+-..|..||-+.++..+.-..+-+.+...|
T Consensus 77 PValHl-DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~g 129 (323)
T 2isw_A 77 PICIHL-DHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARS 129 (323)
T ss_dssp CEEEEE-EEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred cEEEEC-CCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 344444 55678999999999999999999999999988777777777666655
No 172
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=36.19 E-value=30 Score=29.22 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCcEEEEecC-CCCHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFS-HGSYEYHGQTIKNIR 84 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s-Hg~~e~~~~~i~~ir 84 (187)
..+..|.+.|+++..+.+| |++.++..++++.++
T Consensus 362 ~~~~~~~~~~~~v~~i~~SgHa~~~eL~~~~~~~~ 396 (429)
T 2az4_A 362 VFLDLLAKKDITFVRLACSGHAIPEDLDKIIALIE 396 (429)
T ss_dssp HHHHHHHHTTCEEEECCCCSSCCHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEEeecCCCCHHHHHHHHHhhC
Confidence 4566688999999999998 999999988888765
No 173
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=36.12 E-value=1.2e+02 Score=26.62 Aligned_cols=66 Identities=17% Similarity=0.270 Sum_probs=47.6
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHHh---------c----CcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcce
Q psy254 33 YVRLTGIICTIGPASVAVDMLEKIIET---------G----MNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHA 99 (187)
Q Consensus 33 ~~r~TkIi~TiGPas~~~~~i~~li~a---------G----m~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~ 99 (187)
+..+++|...|-. .-+.+.+.+.++. | +|..-+-|..++++....+++.|+++. .
T Consensus 88 ~~np~~ia~eI~D-~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~~dpe~~~~~Vk~V~e~~-----------d 155 (445)
T 2h9a_A 88 FEHPCGLAILVED-TLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREVT-----------D 155 (445)
T ss_dssp CCSCCEEEEEEET-TSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTTCCHHHHHHHHHHHHHHC-----------C
T ss_pred cCCCCeEEEEEec-CCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCCCCHHHHHHHHHHHHHhc-----------C
Confidence 3457788887733 3456777777764 7 999999999999999988888888762 2
Q ss_pred eEEEeeCCCCee
Q psy254 100 LAIALDTKGPEI 111 (187)
Q Consensus 100 v~I~~Dl~GPkI 111 (187)
+++.+| .-|++
T Consensus 156 vPlsID-~dp~v 166 (445)
T 2h9a_A 156 LPFILI-GTPEQ 166 (445)
T ss_dssp SCEEEE-SCHHH
T ss_pred CCEEEE-CCHHH
Confidence 455666 55553
No 174
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=36.10 E-value=47 Score=26.91 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=28.3
Q ss_pred EecCCCCCCHHHHHHHHHhc--CcEEEEecCCCCHHHH
Q psy254 41 CTIGPASVAVDMLEKIIETG--MNIARLNFSHGSYEYH 76 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aG--m~v~RiN~sHg~~e~~ 76 (187)
.|.-|..-+.+.++.|.++| ++-+-|.+-+++.+..
T Consensus 92 ~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl 129 (304)
T 2qgq_A 92 MYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKIL 129 (304)
T ss_dssp CCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHH
T ss_pred eeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHH
Confidence 45667777899999999999 7777777778876643
No 175
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=36.09 E-value=1.7e+02 Score=24.50 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=44.8
Q ss_pred ceEEEecCCCC----CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 37 TGIICTIGPAS----VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 37 TkIi~TiGPas----~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
....++.+... .-.+..+++.+.|-+.+.+.....+.++-.++++.+|++ .| ..+.|++|--+.
T Consensus 152 ~~~y~~~~~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~---~G------~~~~l~vDaN~~ 219 (388)
T 4h83_A 152 LPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREA---AG------DDFIICIDANQG 219 (388)
T ss_dssp EEEEEEECCTTCTTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHH---HC------SSSEEEEECTTC
T ss_pred eEEEeeccccCCCHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHh---cC------CCeEEEEecCcC
Confidence 34455544332 224677889999999999999877877777777777765 45 447899997653
No 176
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=36.08 E-value=1.1e+02 Score=22.72 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=26.5
Q ss_pred CEEeeCcc--hhhhcCCCCCEEEEe--CCeEEEEEEEEe
Q psy254 147 TDLYVDYT--NITKVVKPGSRIFVD--DGLISLVVKSIV 181 (187)
Q Consensus 147 ~~i~v~~~--~l~~~v~~Gd~Ilid--DG~i~l~V~~v~ 181 (187)
..|++..| .-+-.-++||.|-+. +|...++|.+|.
T Consensus 116 ~~IS~~SPlg~ALlGk~vGD~v~v~~P~G~~~~~I~~I~ 154 (158)
T 2p4v_A 116 DYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIE 154 (158)
T ss_dssp CCBCTTSHHHHHSTTCCTTCEEEEECSSCEEEEEEEEEE
T ss_pred CeecCCCHHHHHhcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 45776654 233467899999997 889999999986
No 177
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=35.91 E-value=70 Score=25.78 Aligned_cols=44 Identities=16% Similarity=0.305 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHhcC--------------cEEEEecC-CCCHHHHHHHHHHHHHHHHHhC
Q psy254 48 VAVDMLEKIIETGM--------------NIARLNFS-HGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 48 ~~~~~i~~li~aGm--------------~v~RiN~s-Hg~~e~~~~~i~~ir~a~~~~~ 91 (187)
...+..+.|.+.|+ +.+||+++ .-+.++..+.++.++++.++.+
T Consensus 339 ~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 339 LATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp HHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 34567778888875 46799998 5688999999999999887764
No 178
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=35.78 E-value=73 Score=26.69 Aligned_cols=63 Identities=8% Similarity=0.201 Sum_probs=41.8
Q ss_pred ceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+-+|+|-.+ ...+..+++++.|.+.+.+.+...+.++-.++++.||++. + ..+.+++|..|
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~---g------~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF---G------ERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---G------GGSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh---C------CCCeEEEeCCC
Confidence 34456765221 1123445667789999999998877777777777777654 3 34688889654
No 179
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=35.70 E-value=57 Score=26.16 Aligned_cols=47 Identities=26% Similarity=0.317 Sum_probs=32.7
Q ss_pred EecCCCCCCHHHHHHHHHh-cC-------------cEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy254 41 CTIGPASVAVDMLEKIIET-GM-------------NIARLNFSHGSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~a-Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~ 88 (187)
..+.....+.+....|++. |+ +.+||++++ +.++..+.++.++++.+
T Consensus 314 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 314 IDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVS 374 (377)
T ss_dssp EECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred EECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 4553222334667777766 65 568999997 78888888888887754
No 180
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=35.44 E-value=92 Score=26.66 Aligned_cols=48 Identities=13% Similarity=0.281 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.+...| +.+.-.++++.||++ .+ ..+.|++|-.|
T Consensus 191 ~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a---vG------~d~~l~vDan~ 238 (428)
T 3bjs_A 191 EEAQEYIARGYKALKLRIGD-AARVDIERVRHVRKV---LG------DEVDILTDANT 238 (428)
T ss_dssp HHHHHHHHHTCSEEEEECCS-CHHHHHHHHHHHHHH---HC------TTSEEEEECTT
T ss_pred HHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHHHh---cC------CCCEEEEECCC
Confidence 45566788999999999988 556666677777665 34 33677888754
No 181
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=35.30 E-value=73 Score=26.69 Aligned_cols=63 Identities=19% Similarity=0.271 Sum_probs=42.4
Q ss_pred ceEEEec-CCCCCCHH----HHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTI-GPASVAVD----MLEKIIET-GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~Ti-GPas~~~~----~i~~li~a-Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+.+|+ |....+++ ..+++++. |.+.+.+.+...+.++-.++++.||++ .+ ..+.+++|..|
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g------~~~~l~vDan~ 206 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VD------SAVRIAIDGNG 206 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SC------TTCEEEEECTT
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cC------CCCcEEeeCCC
Confidence 5677874 33333443 34467778 999999999877777766666666654 44 34688889754
No 182
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=35.24 E-value=1.1e+02 Score=25.42 Aligned_cols=53 Identities=13% Similarity=0.227 Sum_probs=42.8
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+..-+ ....+.+.+.+-+++|.+-..|..||-+.++..+.-..+-+.+...|
T Consensus 76 PValHL-DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~g 128 (307)
T 3n9r_A 76 PVALHL-DHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAG 128 (307)
T ss_dssp CEEEEE-EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEC-CCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 345544 45567899999999999999999999999988777777777776665
No 183
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=35.14 E-value=67 Score=27.83 Aligned_cols=48 Identities=21% Similarity=0.315 Sum_probs=36.7
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+-+.+++.....+.++.++++|++..=+..+||..+.+.+.+..+++.
T Consensus 224 vg~~i~~~~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~ 271 (491)
T 1zfj_A 224 VAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH 271 (491)
T ss_dssp CEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH
T ss_pred EEEeccCchhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH
Confidence 334456666678899999999999999999999877766666666643
No 184
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=35.04 E-value=8.1 Score=29.49 Aligned_cols=16 Identities=25% Similarity=0.482 Sum_probs=13.7
Q ss_pred hhhcCCCCCEEEEeCC
Q psy254 156 ITKVVKPGSRIFVDDG 171 (187)
Q Consensus 156 l~~~v~~Gd~IlidDG 171 (187)
.+..|++||.|++-+|
T Consensus 117 ~A~eLk~GD~v~~~~~ 132 (186)
T 2jmz_A 117 NAEMVKVGDYIYIPKN 132 (186)
T ss_dssp EGGGCCTTSEEEEECS
T ss_pred EhhcCCCCCEEEeccc
Confidence 5689999999999874
No 185
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=35.03 E-value=47 Score=28.09 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCcEEEEecCCC-----CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHG-----SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg-----~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.+...|+ +.+.....++.++++.+..+ ..+.|++|..|
T Consensus 154 ~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g------~d~~l~vDan~ 210 (392)
T 3p3b_A 154 EEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAG------PAGKIMIDANN 210 (392)
T ss_dssp HHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHC------TTCCEEEECTT
T ss_pred HHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhC------CCCeEEEECCC
Confidence 445667889999999998875 11133444444444444455 34678889864
No 186
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=34.71 E-value=1e+02 Score=25.51 Aligned_cols=31 Identities=13% Similarity=0.310 Sum_probs=23.4
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCC
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSH 70 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sH 70 (187)
+|.+|.|. -+.+.++.|.++|++.+-+++-.
T Consensus 149 ~i~~t~G~--l~~e~l~~L~~aGvd~v~i~les 179 (369)
T 1r30_A 149 EACMTLGT--LSESQAQRLANAGLDYYNHNLDT 179 (369)
T ss_dssp EEEEECSS--CCHHHHHHHHHHCCCEEECCCBS
T ss_pred eEEEecCC--CCHHHHHHHHHCCCCEEeecCcC
Confidence 45567665 57899999999999876666554
No 187
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=34.68 E-value=39 Score=27.80 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=22.7
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy254 62 NIARLNFSHGSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 62 ~v~RiN~sHg~~e~~~~~i~~ir~a~~ 88 (187)
+.+||+|++ +.++..+.++.++++.+
T Consensus 395 ~~iRis~~~-~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 395 HYIRFCFVK-DEATLQAMDEKLRKWKV 420 (422)
T ss_dssp SEEEEECCC-CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 578999999 99999999999988754
No 188
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=34.12 E-value=92 Score=25.83 Aligned_cols=48 Identities=19% Similarity=0.333 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++.|-+.+.+++... .++-.++++.||++ .+ ..+.+++|..|
T Consensus 145 ~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a---~g------~~~~l~vDan~ 192 (354)
T 3jva_A 145 QKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREA---VG------FDIKLRLDANQ 192 (354)
T ss_dssp HHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHH---HC------TTSEEEEECTT
T ss_pred HHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHH---cC------CCCeEEEECCC
Confidence 445677889999999999654 34455556666654 45 34688999764
No 189
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=34.00 E-value=78 Score=26.62 Aligned_cols=62 Identities=18% Similarity=0.321 Sum_probs=40.4
Q ss_pred eEEEecCCCC--CCHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 38 GIICTIGPAS--VAVDMLEKIIET-GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 38 kIi~TiGPas--~~~~~i~~li~a-Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+-+|+|-.+ .-.+..+++++. |.+.+.+.+...+.++-.++++.||++ .+ ..+.+++|..|
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a---~g------~~~~l~vDan~ 203 (383)
T 3i4k_A 139 DVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE---VG------DRVSLRIDINA 203 (383)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT---TT------TTSEEEEECTT
T ss_pred EEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH---cC------CCCEEEEECCC
Confidence 3345665322 112344566777 999999999887777777777777654 34 33678888754
No 190
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=33.85 E-value=1.3e+02 Score=25.86 Aligned_cols=52 Identities=8% Similarity=0.113 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCcEEEEecCCCC---------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS---------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~---------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++.|-+.++++..... .+...+.++.++.+.+..| ..+.|++|.-|
T Consensus 152 ~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG------~d~~L~vDan~ 212 (433)
T 3rcy_A 152 ESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVG------DKADLLFGTHG 212 (433)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHT------TSSEEEECCCS
T ss_pred HHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhC------CCCeEEEeCCC
Confidence 3456678889999999986421 1234445555555555566 44688889764
No 191
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=33.49 E-value=58 Score=27.42 Aligned_cols=61 Identities=11% Similarity=0.215 Sum_probs=38.0
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAVD----MLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~----~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+-+|+|- .+++ ..+++.+.|.+.+.|++.. +.++-.++++.|| +..+ ..+.+++|..|
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~G~~~iKiK~G~-~~~~d~~~v~avR---~a~g------~~~~l~vDan~ 198 (378)
T 3eez_A 134 PRPIASSVGA--KSVEETRAVIDRYRQRGYVAHSVKIGG-DVERDIARIRDVE---DIRE------PGEIVLYDVNR 198 (378)
T ss_dssp CEEBBCCBCS--CCHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHT---TSCC------TTCEEEEECTT
T ss_pred eEEEEEEecC--CCHHHHHHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHH---HHcC------CCceEEEECCC
Confidence 3445667753 3343 3456778899999999976 4444445555554 4444 34688888754
No 192
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=33.43 E-value=1.2e+02 Score=25.26 Aligned_cols=52 Identities=10% Similarity=0.238 Sum_probs=42.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
++.-+ ....+.+.+.+-+++|.+-..|..||-+.|+..+.-..+-+.+...|
T Consensus 75 ValHl-DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~g 126 (305)
T 1rvg_A 75 VAVHL-DHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVG 126 (305)
T ss_dssp EEEEE-EEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEC-CCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 44444 44567999999999999999999999999988888777777777666
No 193
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=33.34 E-value=1.2e+02 Score=25.71 Aligned_cols=64 Identities=9% Similarity=0.172 Sum_probs=41.8
Q ss_pred ceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTIGPASV--AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+-+|+|-.+. -.+..+++++.|.+.+.+.+...+.++-.++++.||++.- + ..+.|++|--|
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~g--g------~~~~L~vDaN~ 219 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIR--G------TGTRLAVDGNR 219 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHT--T------TTCEEEEECTT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhC--C------CCCeEEEeCCC
Confidence 445567753221 1234556788899999999987677777777777776542 0 12578888754
No 194
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=33.19 E-value=41 Score=29.15 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=57.6
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH------HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC-CCeeEeeecCCCCcc
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE------YHGQTIKNIRQAVENYSKRIGMPHALAIALDTK-GPEIRTGLLQGGGSA 122 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e------~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~-GPkIRtG~~~~~~~~ 122 (187)
..+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...-|.- | +
T Consensus 41 lpTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg------~~V~f~~d~~~G----v--------- 99 (387)
T 1zmr_A 41 LPTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLS------NPVRLVKDYLDG----V--------- 99 (387)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCS------SCEEEESCCTTC----C---------
T ss_pred HHHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhC------CCCEECcccccC----c---------
Confidence 3799999999999765 7986533 22233333345566666 7888877876 6 2
Q ss_pred cEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCC
Q psy254 123 EVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 123 ~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG 171 (187)
- |++|+.+.|-.-.-+..+.. +.++|.+.+.+---||++|.
T Consensus 100 -~-l~~G~VlLLEN~RF~~~E~~------nd~~fa~~LA~l~DvyVNDA 140 (387)
T 1zmr_A 100 -D-VAEGELVVLENVRFNKGEKK------DDETLSKKYAALCDVFVMDA 140 (387)
T ss_dssp -C-CCTTCEEEECCGGGSTTTTT------TCHHHHHHHHHTCSEEEECC
T ss_pred -c-CCCCeEEEEcccCCCcchhc------CCHHHHHHHHhhCCEEEecc
Confidence 2 55666665532221211111 44678887777777898884
No 195
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=33.02 E-value=1.1e+02 Score=25.36 Aligned_cols=62 Identities=10% Similarity=0.186 Sum_probs=39.2
Q ss_pred ceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
...-+|+|-.+ .-.+..+++++.|.+.+.+++.. +.++-.++++.+|++ .+ ..+.+++|..|
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~-~~~~d~~~v~avR~~---~g------~~~~l~vDan~ 193 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG-DEEQDFERLRRLHET---LA------GRAVVRVDPNQ 193 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHH---HT------TSSEEEEECTT
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC-CHHHHHHHHHHHHHH---hC------CCCEEEEeCCC
Confidence 34456665422 11244566788899999999975 455555666666654 44 34688888654
No 196
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=32.99 E-value=2.1e+02 Score=23.68 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=43.0
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+.+|+|-.+.+. +..++++..|-+.+.+.... +.++-.++++.||++ .| ..+.|++|--|
T Consensus 131 ~vp~~~~~g~~~~~~~~~~~~a~~~~~~G~~~~KiKvG~-~~~~d~~~v~avr~a---~g------~~~~l~vDaN~ 197 (372)
T 3cyj_A 131 EVPVYGSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGR-EPEKDPERVRAAREA---IG------ESVELMVDANG 197 (372)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCS-SGGGHHHHHHHHHHH---HC------TTSEEEEECTT
T ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHHHHH---hC------CCCeEEEECCC
Confidence 456677875433333 56677888999999998754 555556677777765 34 34789999765
No 197
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=32.70 E-value=86 Score=25.85 Aligned_cols=50 Identities=12% Similarity=0.204 Sum_probs=35.8
Q ss_pred EEEecCCCCCCHHHHHHHHH-hcC-------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIE-TGM-------NIARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~-aGm-------~v~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
+.+.+ |.....+..+.|.+ .|+ +.+||++++-+.++..+.++.++++.++
T Consensus 371 ~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 371 MAIKV-HDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp EEEEE-SSSCHHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred EEeCC-CCCCHHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 44445 32234456677887 774 4689999966888899999999887665
No 198
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=32.67 E-value=1.3e+02 Score=24.39 Aligned_cols=52 Identities=23% Similarity=0.335 Sum_probs=37.2
Q ss_pred EEEecCCCCCCHHHHHHHHHh-cC---------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 39 IICTIGPASVAVDMLEKIIET-GM---------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~a-Gm---------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+...+.+.....+..+.|.+. |+ +.+||++++-+.++..+.++.++++.+++
T Consensus 337 ~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 337 VMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp EEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 445553223345666778877 53 57899999888899999999998877654
No 199
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=32.66 E-value=89 Score=25.11 Aligned_cols=41 Identities=12% Similarity=0.121 Sum_probs=31.4
Q ss_pred CHHHHHHHHHhcC-------------------cEEEEecCCC-CHHHHHHHHHHHHHHHHH
Q psy254 49 AVDMLEKIIETGM-------------------NIARLNFSHG-SYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 49 ~~~~i~~li~aGm-------------------~v~RiN~sHg-~~e~~~~~i~~ir~a~~~ 89 (187)
..+..+.|.+.|+ +.+||++++. +.++..+.++.++++.+.
T Consensus 344 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 344 AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 3455666777775 5799999987 888899999999887654
No 200
>1mi8_A DNAB intein; all beta-strands, hydrolase; 2.00A {Synechocystis SP} SCOP: b.86.1.2
Probab=32.65 E-value=1.1e+02 Score=22.05 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=23.0
Q ss_pred EEeeeCCEEEEeeCCCcccCCCcCEEeeC-cchhhhcCCCCCEEEEeC
Q psy254 124 VELVKGQTIRLTTDAAFAEKGSATDLYVD-YTNITKVVKPGSRIFVDD 170 (187)
Q Consensus 124 i~l~~G~~v~lt~~~~~~~~~~~~~i~v~-~~~l~~~v~~Gd~IlidD 170 (187)
+.++.|.++++|.+-.+ ++. --..+..|++||.|++..
T Consensus 61 i~t~~G~~i~~T~~H~~---------~t~~gw~~a~~L~~GD~v~~~~ 99 (158)
T 1mi8_A 61 LKTRLGRTIKATANHRF---------LTIDGWKRLDELSLKEHIALPR 99 (158)
T ss_dssp EEETTCCEEEECTTCEE---------EETTEEEEGGGCCTTCEEEEEC
T ss_pred EEECCCCEEEEeCCceE---------EeccCCEEhhhCCCCCEEEecc
Confidence 33445777776655332 221 113467899999999874
No 201
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=32.62 E-value=1.5e+02 Score=23.20 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHhcC-----------cEEEEecCCC-CHHHHHHHHHHHHHHHHHh
Q psy254 48 VAVDMLEKIIETGM-----------NIARLNFSHG-SYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 48 ~~~~~i~~li~aGm-----------~v~RiN~sHg-~~e~~~~~i~~ir~a~~~~ 90 (187)
...+..+.|.+.|+ +.+||++++. +.++..+.++.++++.++.
T Consensus 294 ~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 294 PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp CHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 34566677777774 5689999876 5889999999998876654
No 202
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=32.57 E-value=6.6 Score=34.26 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=60.7
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHH----HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC-CeeEeeecCCCCcccEE
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYE----YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG-PEIRTGLLQGGGSAEVE 125 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e----~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G-PkIRtG~~~~~~~~~i~ 125 (187)
.+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...-|.-| |+.+- +. .
T Consensus 47 pTI~~ll~~GakVil--~SHlGRP~g~~~~~SL~pva~~L~~lLg------~~V~f~~d~~G~~~~~~--v~-------~ 109 (403)
T 3q3v_A 47 PTIRYCLDNGCSVIL--ASHLGRPKEISSKYSLEPVAKRLARLLD------KEIVMAKDVIGEDAKTK--AM-------N 109 (403)
T ss_dssp HHHHHHHHTTCEEEE--ECCCSCCSSCCGGGCSHHHHHHHHHHHT------SCCEECSSSSSHHHHHH--HH-------H
T ss_pred HHHHHHHHCCCEEEE--EecCCCCCCCCcccCHHHHHHHHHHHHC------CCeEecCCCCCcHHHHH--Hh-------c
Confidence 799999999999765 8996632 11122222334555666 78898889888 77663 22 3
Q ss_pred eeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCC
Q psy254 126 LVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 126 l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG 171 (187)
|+.|+.+.|-.-.-+..+ . -+.++|.+.+..---||++|.
T Consensus 110 l~~G~VlLLEN~RF~~~E--~----~nd~~fa~~LA~l~DvyVNDA 149 (403)
T 3q3v_A 110 LKAGEILLLENLRFEKGE--T----KNDENLAKELASMVQVYINDA 149 (403)
T ss_dssp CCTTCEEECSCGGGSTTG--G----GTCHHHHHHHHHTCSEEEECC
T ss_pred CCCCcEEEEeecccccch--h----hcHHHHHHHHHhhCCEEEECc
Confidence 666776655322211111 1 144678887777667888885
No 203
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=32.52 E-value=69 Score=25.31 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=26.7
Q ss_pred EeeCcc-hhhhcCCCCCEEEEeCCeEEEEEEEEeCCe
Q psy254 149 LYVDYT-NITKVVKPGSRIFVDDGLISLVVKSIVKSY 184 (187)
Q Consensus 149 i~v~~~-~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~ 184 (187)
+.+..+ .+.+.+++|+.|-+|. ++|+|.+++++.
T Consensus 24 l~i~~~~~~~~~l~~g~SIAvnG--vcLTV~~v~~~~ 58 (213)
T 1i8d_A 24 HVVELPDHMLDGLETGASVAHNG--CCLTVTEINGNH 58 (213)
T ss_dssp EEEECCGGGTTTCCTTCEEEETT--EEEEEEEEETTE
T ss_pred EEEEEChHHhccCCCCcEEEECC--EEeeEEEEcCCE
Confidence 344333 5678999999999986 799999998775
No 204
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=32.11 E-value=1.8e+02 Score=24.42 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=41.5
Q ss_pred CceEEEecCC---CCCCH--------HHHHHHHHhcCcEEEE-ecCC--CCHHHHHHHHHHHHHHHHHhCCCCCCcceeE
Q psy254 36 LTGIICTIGP---ASVAV--------DMLEKIIETGMNIARL-NFSH--GSYEYHGQTIKNIRQAVENYSKRIGMPHALA 101 (187)
Q Consensus 36 ~TkIi~TiGP---as~~~--------~~i~~li~aGm~v~Ri-N~sH--g~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~ 101 (187)
+....+|+|+ .+.++ +..+++.+.|-+.+.+ -... .+.++-.++++.||++ .| ..+.
T Consensus 132 ~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a---~G------~d~~ 202 (394)
T 3mqt_A 132 QLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREV---IG------WDMD 202 (394)
T ss_dssp SBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHH---HC------SSSE
T ss_pred eEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHH---hC------CCCe
Confidence 3455788885 23332 2566788899999999 4543 4566656666666654 45 3467
Q ss_pred EEeeCCC
Q psy254 102 IALDTKG 108 (187)
Q Consensus 102 I~~Dl~G 108 (187)
|++|.-|
T Consensus 203 l~vDan~ 209 (394)
T 3mqt_A 203 MMVDCLY 209 (394)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 8889764
No 205
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=31.99 E-value=1.2e+02 Score=25.79 Aligned_cols=66 Identities=9% Similarity=0.168 Sum_probs=40.9
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCCC------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 36 LTGIICTIGPASV--AVDMLEKIIETGMNIARLNFSHG------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 36 ~TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sHg------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+..+-+|+|..+. -.+..+++++.|-+.+.| .... +.+...+-++.++.+.+..| ..+.|++|.-
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~avG------~d~~L~vDaN 186 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSAFG------NTVEFGLDFH 186 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHTTG------GGSEEEEECC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHHhC------CCceEEEECC
Confidence 4567788874331 124455678889999999 3321 12345555666666666666 4578889975
Q ss_pred C
Q psy254 108 G 108 (187)
Q Consensus 108 G 108 (187)
|
T Consensus 187 ~ 187 (405)
T 3rr1_A 187 G 187 (405)
T ss_dssp S
T ss_pred C
Confidence 4
No 206
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli}
Probab=31.80 E-value=1.2e+02 Score=26.60 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCcEEEEecCC
Q psy254 50 VDMLEKIIETGMNIARLNFSH 70 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sH 70 (187)
.+.|+-|-+.|++++|+.+|.
T Consensus 74 ~eDi~lm~~~G~~~~R~sisW 94 (479)
T 2xhy_A 74 KEDIKLFAEMGFKCFRTSIAW 94 (479)
T ss_dssp HHHHHHHHHHTCSEEEEECCH
T ss_pred HHHHHHHHHcCCCEEEeeCCH
Confidence 578899999999999999984
No 207
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=31.78 E-value=8.9 Score=33.42 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=62.0
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH-----HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEeeecCCCCcccE
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE-----YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRTGLLQGGGSAEV 124 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e-----~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG~~~~~~~~~i 124 (187)
..+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...=|.-||+.+- .+.
T Consensus 40 lpTI~~ll~~gakvil--~SHlGRPkg~~~~~~SL~pva~~L~~lLg------~~V~f~~d~~G~~~~~-~v~------- 103 (398)
T 1vpe_A 40 LPTIKYALEQGAKVIL--LSHLGRPKGEPSPEFSLAPVAKRLSELLG------KEVKFVPAVVGDEVKK-AVE------- 103 (398)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSCCCSSCCGGGCSHHHHHHHHHHHT------SCCEEESCSSSHHHHH-HHH-------
T ss_pred HHHHHHHHHCCCEEEE--EccCCCCCCCcCCccCHHHHHHHHHHHHC------CCceeCCCCCCHHHHH-HHh-------
Confidence 3799999999999765 7895432 22222233345566667 7898888999988872 121
Q ss_pred EeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCC
Q psy254 125 ELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 125 ~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG 171 (187)
.|++|+.+.|-.-.-+..+ . -+.++|.+.+.+---||++|.
T Consensus 104 ~l~~G~VlLLEN~RF~~~E---~---~nd~~fa~~LA~l~DvyVNDA 144 (398)
T 1vpe_A 104 ELKEGEVLLLENTRFHPGE---T---KNDPELAKFWASLADIHVNDA 144 (398)
T ss_dssp TCCTTEEEEECCGGGSTHH---H---HTCHHHHHHHHTTCSEEEECC
T ss_pred cCCCCeEEEEcccCCCcch---h---cCCHHHHHHHHhhCCEEEecc
Confidence 2556666555322211111 0 144578887777777898884
No 208
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=31.75 E-value=61 Score=26.01 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=34.2
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-----------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-----------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-----------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+.+.+ |.....+..+.|.+.|+ +.+||+++ +.++..+.++.+++..+.+
T Consensus 296 ~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 296 LFATP-PDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp EEEEC-TTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC--
T ss_pred EEEEC-CCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhccc
Confidence 44455 33344566677888875 55899987 8999999999998876654
No 209
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=31.69 E-value=56 Score=26.07 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=36.0
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCC-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEee
Q psy254 38 GIICTIGPASVAVDMLEKIIETGMNIARLNFSHGS-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALD 105 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~D 105 (187)
.-+|++-|. ...+.|+++.+.|+..+|+|..... .+.....+..+=+++++++ .||-|-..
T Consensus 97 ~g~~~v~P~-~~~~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~g------lpv~iH~~ 158 (294)
T 4i6k_A 97 KGIAVVQHT-TTFNELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLN------WQVELHAP 158 (294)
T ss_dssp EEEECCCTT-CCHHHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTT------CEEEEECC
T ss_pred EEEEEeCCc-ccHHHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcC------CEEEEeeC
Confidence 345567564 4578899999999999999984321 1222233333334444555 56555543
No 210
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=31.65 E-value=2e+02 Score=23.00 Aligned_cols=52 Identities=10% Similarity=-0.017 Sum_probs=37.2
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCcEEEEec--C--------CCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPASVAVDMLEKIIETGMNIARLNF--S--------HGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~--s--------Hg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+++.+-+ | +.+.++..+++|++.+++-+ | +-+.++..+.+..+-+.+++.|
T Consensus 72 ~~~v~~l~-~---n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G 133 (295)
T 1ydn_A 72 GVRYSVLV-P---NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG 133 (295)
T ss_dssp SSEEEEEC-S---SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEe-C---CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC
Confidence 55665433 3 57899999999999999974 3 5677766666666555666666
No 211
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=31.55 E-value=2.1e+02 Score=24.49 Aligned_cols=39 Identities=18% Similarity=0.328 Sum_probs=30.4
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHH
Q psy254 37 TGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEY 75 (187)
Q Consensus 37 TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~ 75 (187)
..|-+..-|.+-+.+.++.|.++|++.+-|.+-.++.+.
T Consensus 140 ~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~ 178 (457)
T 1olt_A 140 AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEV 178 (457)
T ss_dssp EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHH
T ss_pred cEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHH
Confidence 355556679888999999999999987777776666554
No 212
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=31.47 E-value=67 Score=25.28 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=26.8
Q ss_pred EeeCcchhhhcCCCCCEEEEeCCeEEEEEEEEeCCe
Q psy254 149 LYVDYTNITKVVKPGSRIFVDDGLISLVVKSIVKSY 184 (187)
Q Consensus 149 i~v~~~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~ 184 (187)
+.+..+.+.+.+++|+.|-+|. ++|+|.++.++.
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~ 58 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYH 58 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCE
Confidence 4444345778999999999986 899999998765
No 213
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=31.31 E-value=1.2e+02 Score=25.78 Aligned_cols=54 Identities=11% Similarity=0.168 Sum_probs=38.1
Q ss_pred cCC-CCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHH-HHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 43 IGP-ASVAV----DMLEKIIETGMNIARLNFSHGSYEYHG-QTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 43 iGP-as~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~-~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+|+ ++.++ ..++.|-++|.++|=+|...-+ +... +.++.+.+++++.+ +.+++.
T Consensus 95 lG~Yss~d~~v~~~h~~~Ak~aGIDgf~l~w~~~~-~~~d~~~l~~~l~aA~~~~------~k~~f~ 154 (380)
T 4ad1_A 95 LGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQ-DETEAKRIGLILDAADKKK------IKVCFH 154 (380)
T ss_dssp TCSCCTTCHHHHHHHHHHHHHHTEEEEEEEECCCC-SHHHHHHHHHHHHHHHHTT------CEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHcCCCEEEEEecCCC-CcccHHHHHHHHHHHHHcC------CeEEEE
Confidence 577 34555 4566799999999999986323 2334 78889999888877 556543
No 214
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=31.22 E-value=1.4e+02 Score=25.27 Aligned_cols=53 Identities=8% Similarity=0.108 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCcEEEEecC----------CCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 50 VDMLEKIIETGMNIARLNFS----------HGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~s----------Hg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+..+++++.|.+.+.+... +.+.+...+-++.++++.+..+ ..+.|++|.-|
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g------~~~~l~vDaN~ 219 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVG------DKMDIMVEFHS 219 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHG------GGSEEEEECTT
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcC------CCceEEEECCC
Confidence 45678899999999999854 1123445555566666555566 44789999764
No 215
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=31.20 E-value=31 Score=28.74 Aligned_cols=48 Identities=15% Similarity=0.120 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCcEEEEecCCCC----HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS----YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~----~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.++-|-.+|+|.+||-. +.+ ...+..++..+++| ++.| +.|++|+-+
T Consensus 31 d~~~ilk~~G~N~VRi~~-w~~P~~g~~~~~~~~~~~~~A-~~~G--------lkV~ld~Hy 82 (332)
T 1hjs_A 31 PLENILAANGVNTVRQRV-WVNPADGNYNLDYNIAIAKRA-KAAG--------LGVYIDFHY 82 (332)
T ss_dssp CHHHHHHHTTCCEEEEEE-CSSCTTCTTSHHHHHHHHHHH-HHTT--------CEEEEEECC
T ss_pred cHHHHHHHCCCCEEEEee-eeCCCCCcCCHHHHHHHHHHH-HHCC--------CEEEEEecc
Confidence 356667789999999975 322 22344555555554 4445 789999865
No 216
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=31.12 E-value=1.1e+02 Score=26.22 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=39.4
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCC-------CC----------------------HHHHHHHHHHHH
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSH-------GS----------------------YEYHGQTIKNIR 84 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sH-------g~----------------------~e~~~~~i~~ir 84 (187)
+...-+|++-.+ .-.+..+++++.|.+.+.+.+.. |. .++..+.++.++
T Consensus 132 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~ 211 (418)
T 3r4e_A 132 GIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFE 211 (418)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 344555653211 11344567788999999998763 10 112445566666
Q ss_pred HHHHHhCCCCCCcceeEEEeeCCC
Q psy254 85 QAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 85 ~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+.+..+ ..+.|++|.-|
T Consensus 212 avR~a~G------~d~~l~vDaN~ 229 (418)
T 3r4e_A 212 ELRKTYG------FDHHLLHDGHH 229 (418)
T ss_dssp HHHHHHC------SSSEEEEECTT
T ss_pred HHHHHcC------CCCeEEEeCCC
Confidence 6666666 44688889764
No 217
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=31.08 E-value=96 Score=26.22 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=43.8
Q ss_pred CCceEEEecCCC-CCCH----HHHHHHHHh---cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 35 RLTGIICTIGPA-SVAV----DMLEKIIET---GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 35 r~TkIi~TiGPa-s~~~----~~i~~li~a---Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
.+....+|+|-- ..++ +..+++++. |.+.+.+.....+.++-.++++.||++. + ..+.+++|.
T Consensus 156 ~~v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~---G------~~~~l~vDa 226 (390)
T 3ugv_A 156 GSVKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV---G------RDTALMVDF 226 (390)
T ss_dssp CEEEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH---C------TTSEEEEEC
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh---C------CCCEEEEEC
Confidence 345567777541 1233 344566677 9999999998877777777777777653 4 346888897
Q ss_pred CC
Q psy254 107 KG 108 (187)
Q Consensus 107 ~G 108 (187)
-|
T Consensus 227 N~ 228 (390)
T 3ugv_A 227 NQ 228 (390)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 218
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=30.88 E-value=68 Score=25.18 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhcCcEEEEecCCC-CHHHHHHHHHHHHH
Q psy254 49 AVDMLEKIIETGMNIARLNFSHG-SYEYHGQTIKNIRQ 85 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg-~~e~~~~~i~~ir~ 85 (187)
+.+.+.++.++|+++.=++.++. +++...++++.+|+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH
Confidence 46789999999999999999986 56666777776665
No 219
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=30.74 E-value=1.3e+02 Score=25.28 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=16.4
Q ss_pred HHHHHHhcCcEEEEecCCCC
Q psy254 53 LEKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 53 i~~li~aGm~v~RiN~sHg~ 72 (187)
-+...++|.|.+-||++||-
T Consensus 173 A~~a~~aGfDgVEih~a~Gy 192 (376)
T 1icp_A 173 ARNAIEAGFDGVEIHGAHGY 192 (376)
T ss_dssp HHHHHHTTCSEEEEEECTTS
T ss_pred HHHHHHcCCCEEEEcCccch
Confidence 34567899999999999963
No 220
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=30.64 E-value=87 Score=25.12 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=34.7
Q ss_pred EEecCCCCCCHHHHHHHH-HhcC-----------cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 40 ICTIGPASVAVDMLEKII-ETGM-----------NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 40 i~TiGPas~~~~~i~~li-~aGm-----------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
...+.......+..+.|+ +.|+ +.+||++++.. ++..+.++.++++.+++.
T Consensus 310 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~-~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 310 FVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQ-ETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp EEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCH-HHHHHHHHHHHHHHGGGC
T ss_pred eEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCH-HHHHHHHHHHHHHHHHHh
Confidence 334432334456667775 6675 57899999865 788888888888776543
No 221
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=30.53 E-value=91 Score=25.88 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=34.1
Q ss_pred EEEecCCCCCCHHHHHHHHHh-cC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 39 IICTIGPASVAVDMLEKIIET-GM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~a-Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+...+ |...+.+..+.|++. |+ +.+||++++ +.++..+.++.++++.++.
T Consensus 377 ~~~~~-~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 377 IWVGF-PGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp EEEEC-TTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC--
T ss_pred EEEEC-CCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 44445 333345666778775 75 567999887 8899999999998876543
No 222
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=30.12 E-value=47 Score=27.34 Aligned_cols=43 Identities=14% Similarity=0.046 Sum_probs=33.9
Q ss_pred CHHHHHHHHHhcC------cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 49 AVDMLEKIIETGM------NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 49 ~~~~i~~li~aGm------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
..+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.++++
T Consensus 368 ~~~~~~~l~~~gi~v~~g~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 368 ANAICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp HHHHHHHHHHTTEECEECSSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCEEEecCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 3455666777775 457999997799999999999999887765
No 223
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=30.04 E-value=95 Score=25.63 Aligned_cols=19 Identities=21% Similarity=0.550 Sum_probs=16.0
Q ss_pred HHHHHHhcCcEEEEecCCC
Q psy254 53 LEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 53 i~~li~aGm~v~RiN~sHg 71 (187)
-+.+.++|.|..-||++||
T Consensus 150 A~~a~~aGfDgVeih~~~g 168 (338)
T 1z41_A 150 AARAKEAGFDVIEIHAAHG 168 (338)
T ss_dssp HHHHHHTTCSEEEEEECTT
T ss_pred HHHHHHcCCCEEEeccccc
Confidence 4456789999999999996
No 224
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=29.94 E-value=70 Score=29.33 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=28.4
Q ss_pred HHHHHHHhcCcEEEEecCCCC---------HHHHHHHHHHHHHHHHHh
Q psy254 52 MLEKIIETGMNIARLNFSHGS---------YEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 52 ~i~~li~aGm~v~RiN~sHg~---------~e~~~~~i~~ir~a~~~~ 90 (187)
.++-+++.|++.|||..++.- ++.++++.+.+++..+..
T Consensus 350 vl~~Wl~~GVDGFRlDaa~~i~k~~~~~~~~~f~~e~~~~v~~~~~~~ 397 (669)
T 3k8k_A 350 AAKGWIARGVDGLRLDAVKHIYHSETSEENPRFLKMFYEDMNAYYKQK 397 (669)
T ss_dssp HHHHHHTTTCCEEEETTGGGSSSCSSSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEechhhhhhccCCCccHHHHHHHHHHHHHHhhhc
Confidence 455566779999999998654 677777777777655444
No 225
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=29.64 E-value=82 Score=22.47 Aligned_cols=63 Identities=11% Similarity=0.033 Sum_probs=39.1
Q ss_pred eEEEecCC-CCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeC
Q psy254 38 GIICTIGP-ASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDT 106 (187)
Q Consensus 38 kIi~TiGP-as~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl 106 (187)
=||+|-|+ -.......-+++..--++.=++|..+.. -....+.++++.++.... .-|-|+.|+
T Consensus 7 iiivsHG~~~A~~l~~~a~~i~G~~~~~aid~~~~~~--~~~~~~~i~~~i~~~d~~----~GVLiL~Dm 70 (130)
T 3gx1_A 7 VIVMMHGRSTATSMVETVQELLSIESGIALDMPLTVE--VKAMYEKLKQTVVKLNPV----KGVLILSDM 70 (130)
T ss_dssp EEEEEESSSHHHHHHHHHHHHHTCCCCEEEEECTTSC--HHHHHHHHHHHHHTSCCT----TCEEEEECS
T ss_pred EEEEcCCHHHHHHHHHHHHHHcCccCEEEEEecCCCC--HHHHHHHHHHHHHhhCCC----CCEEEEEeC
Confidence 36788899 3333333344444336677788877652 235566667777665422 459999999
No 226
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=29.40 E-value=77 Score=27.29 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~ 72 (187)
+.++.+++.|++.|||..++.-
T Consensus 181 ~~~~~Wl~~gvDGfR~Da~~~i 202 (488)
T 1wza_A 181 GIAKYWLKQGVDGFRLDGAMHI 202 (488)
T ss_dssp HHHHHHHHTTCCEEEEECCCTT
T ss_pred HHHHHHHHcCCCChhHhhHhhh
Confidence 5566678889999999998753
No 227
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=29.38 E-value=1.2e+02 Score=24.86 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=37.4
Q ss_pred CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
-.+.++++++.|-+.+.|.....+.++-.++++.||++ ++ ..+.+++|--|.
T Consensus 120 ~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~---~g------~~~~L~vDaN~~ 171 (332)
T 2ozt_A 120 ALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAA---LP------PGAKLRLDANGS 171 (332)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHH---SC------TTCEEEEECTTC
T ss_pred HHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHH---cC------CCCEEEEcccCC
Confidence 45778889999999999998765556555666666654 44 236888897653
No 228
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=29.38 E-value=1.3e+02 Score=26.45 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=48.6
Q ss_pred CCceEEEec--CCCCCC---------HHHHHHHHHhcCcEEEEecCCC--------CHHHHHHHHHHHHHHHHHhCCCCC
Q psy254 35 RLTGIICTI--GPASVA---------VDMLEKIIETGMNIARLNFSHG--------SYEYHGQTIKNIRQAVENYSKRIG 95 (187)
Q Consensus 35 r~TkIi~Ti--GPas~~---------~~~i~~li~aGm~v~RiN~sHg--------~~e~~~~~i~~ir~a~~~~~~~~~ 95 (187)
++|.||+-+ -|-|-+ .+..++|+++|+++.=||.--. ..||+.+++--|+...++...-
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~-- 266 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGNFDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANL-- 266 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCSSCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CCceEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc--
Confidence 688999876 453321 4678889999999999996321 1467777766666665522100
Q ss_pred CcceeEEEeeCCCCee
Q psy254 96 MPHALAIALDTKGPEI 111 (187)
Q Consensus 96 ~~~~v~I~~Dl~GPkI 111 (187)
...+.|.+|+.=|++
T Consensus 267 -~~~vpISIDT~~~~V 281 (442)
T 3mcm_A 267 -IYKPLVSIDTRKLEV 281 (442)
T ss_dssp -SSCCEEEEECCCHHH
T ss_pred -CCCCeEEEeCCCHHH
Confidence 014789999977765
No 229
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=29.33 E-value=1.8e+02 Score=23.94 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=40.1
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEEEEecCC--------C---CHHHHHHHHHHHHHHHHHhC
Q psy254 41 CTIGPASVAVDMLEKIIETGMNIARLNFSH--------G---SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~v~RiN~sH--------g---~~e~~~~~i~~ir~a~~~~~ 91 (187)
-|+ |...+++.-++|.++|.|+.=+++-- + +.++..+.++.+.++.++.+
T Consensus 165 ~Ti-~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn 225 (286)
T 2p10_A 165 LTT-PYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR 225 (286)
T ss_dssp EEC-CEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred eEE-EecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC
Confidence 455 66789999999999999998887762 2 56666789999988888876
No 230
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=28.90 E-value=8 Score=33.65 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH-----HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEeeecCCCCcccE
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE-----YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRTGLLQGGGSAEV 124 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e-----~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG~~~~~~~~~i 124 (187)
..+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...=|.-||+.+- .+.
T Consensus 41 lpTI~~ll~~gakvil--~SHlGRPkg~~~~~~SL~pva~~L~~lLg------~~V~f~~d~~G~~~~~-~v~------- 104 (394)
T 1php_A 41 LPTIRYLIEHGAKVIL--ASHLGRPKGKVVEELRLDAVAKRLGELLE------RPVAKTNEAVGDEVKA-AVD------- 104 (394)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSCCCSSCCGGGCSHHHHHHHHHHHT------SCCEECSCSSSHHHHH-HHH-------
T ss_pred HHHHHHHHHCCCEEEE--EecCCCCCCCCCCccCHHHHHHHHHHHHC------CCceECCCcCCHHHHH-HHh-------
Confidence 3799999999999765 7995432 22222233345566667 7888888999988872 121
Q ss_pred EeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCC
Q psy254 125 ELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 125 ~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG 171 (187)
.|++|+.+.|-.-.-+..+ . -+.++|.+.+..---||++|.
T Consensus 105 ~l~~G~VlLLEN~RF~~~E--~----~nd~~fa~~LA~l~DvyVNDA 145 (394)
T 1php_A 105 RLNEGDVLLLENVRFYPGE--E----KNDPELAKAFAELADLYVNDA 145 (394)
T ss_dssp TCCTTCEEECCCGGGSHHH--H----HTCHHHHHHHHTTCSEEEECC
T ss_pred cCCCCeEEEEcccCCCcch--h----hCCHHHHHHHHhhCCEEEecc
Confidence 2556666555322111111 0 134578877777777888884
No 231
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=28.40 E-value=2.1e+02 Score=24.08 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=40.4
Q ss_pred ceEEEecCC---CCCCH--------HHHHHHHHhcCcEEEE-ecCC--CCHHHHHHHHHHHHHHHHHhCCCCCCcceeEE
Q psy254 37 TGIICTIGP---ASVAV--------DMLEKIIETGMNIARL-NFSH--GSYEYHGQTIKNIRQAVENYSKRIGMPHALAI 102 (187)
Q Consensus 37 TkIi~TiGP---as~~~--------~~i~~li~aGm~v~Ri-N~sH--g~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I 102 (187)
....+|+|+ .+.+. +..+++++.|-+.+.+ -+.. .+.++-.++++.||++ .| ..+.|
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a---~G------~d~~l 208 (394)
T 3mkc_A 138 VHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGI---LG------HDTDM 208 (394)
T ss_dssp ECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHH---HC------SSSEE
T ss_pred eEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHH---hC------CCCeE
Confidence 345678874 23332 2567788899999999 4543 4566666666666654 45 34678
Q ss_pred EeeCCC
Q psy254 103 ALDTKG 108 (187)
Q Consensus 103 ~~Dl~G 108 (187)
++|.-|
T Consensus 209 ~vDaN~ 214 (394)
T 3mkc_A 209 MVDYLY 214 (394)
T ss_dssp EEECTT
T ss_pred EEeCCC
Confidence 889764
No 232
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=28.10 E-value=34 Score=30.22 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCcEEEEecCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg 71 (187)
.+.|+-|-+.|++++|+.++..
T Consensus 84 ~eDi~lm~~~G~~~~R~si~W~ 105 (468)
T 2j78_A 84 KEDIEIIEKLGVKAYRFSISWP 105 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHH
T ss_pred HHHHHHHHHcCCCEEEeccCHH
Confidence 5788899999999999999853
No 233
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4
Probab=27.96 E-value=1.5e+02 Score=25.51 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcCcEEEEecCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg 71 (187)
.+.|+-|-+.|++++|+.+|..
T Consensus 53 ~eDi~lm~~~G~~~~R~si~W~ 74 (423)
T 1vff_A 53 RDDIQLMTSLGYNAYRFSIEWS 74 (423)
T ss_dssp HHHHHHHHHHTCCEEEEECCHH
T ss_pred HHHHHHHHHcCCCEEEeecCHH
Confidence 5778889999999999999853
No 234
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=27.94 E-value=18 Score=31.64 Aligned_cols=100 Identities=20% Similarity=0.179 Sum_probs=60.0
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHH---HHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEeeecCCCCcccEEe
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYEY---HGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRTGLLQGGGSAEVEL 126 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e~---~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l 126 (187)
..+|+.|++.|..|.= +||-..-. ...+---.+..++.++ ++|...=|.-||+.+- .+. .|
T Consensus 39 lpTI~~ll~~gakVvl--~SHlGRPG~~~~~SL~pva~~L~~lLg------~~V~f~~d~~G~~a~~-~i~-------~l 102 (410)
T 2cun_A 39 LPTIRYLIESGAKVVI--GTHQGKPYSEDYTTTEEHARVLSELLD------QHVEYIEDIFGRYARE-KIK-------EL 102 (410)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSCTTCTTCCCSHHHHHHHHHHHT------SCEEECSCSSSHHHHH-HHH-------TC
T ss_pred HHHHHHHHHCCCEEEE--EcCCCCCCCCCCcCHHHHHHHHHHHHC------CCCeeCCCcCCHHHHH-HHh-------cC
Confidence 4799999999999765 79865321 1122222344555566 7898888999998772 121 25
Q ss_pred eeCCEEEEeeCCCcccCCCcCEEeeCcc-------hhhhcCCCCCEEEEeCC
Q psy254 127 VKGQTIRLTTDAAFAEKGSATDLYVDYT-------NITKVVKPGSRIFVDDG 171 (187)
Q Consensus 127 ~~G~~v~lt~~~~~~~~~~~~~i~v~~~-------~l~~~v~~Gd~IlidDG 171 (187)
++|+.+.|-.-.=+..+.. +.+ +|.+.+.+---||++|.
T Consensus 103 ~~G~VlLLEN~RF~~eE~~------nd~~e~~a~~~fa~~LA~l~DvyVNDA 148 (410)
T 2cun_A 103 KSGEVAILENLRFSAEEVK------NKPIEECEKTFLVKKLSKVIDYVVNDA 148 (410)
T ss_dssp CTTCEEECSCGGGBTTTTS------CCCHHHHTTSHHHHHHHTTCSEEEECC
T ss_pred CCCeEEEEccccccccccc------CCchhhhhHHHHHHHHHhhCCEEEecc
Confidence 5666655432111111110 223 67887777777999884
No 235
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=27.94 E-value=1.7e+02 Score=24.26 Aligned_cols=64 Identities=17% Similarity=0.285 Sum_probs=40.6
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIET-GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~a-Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+-+|+|-.+ .-.+..+++++. |.+.+.+.......++-.++++.||++. | ..+.+++|..|
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~---g------~~~~l~vDan~ 194 (367)
T 3dg3_A 128 RMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF---G------DAIELYVDGNR 194 (367)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH---G------GGSEEEEECTT
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh---C------CCCEEEEECCC
Confidence 344566775322 112445567778 9999999997755435566666677654 4 34678889754
No 236
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=27.89 E-value=1.3e+02 Score=25.26 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=39.8
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCC----CCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASV--AVDMLEKIIETGMNIARLNFSH----GSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sH----g~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+...-+|+|-.+. -.+..+++++.|.+.+.+.+.. ++.++-.++ ++.+.+..+ ..+.+++|.-|
T Consensus 134 ~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~---v~avR~a~G------~~~~L~vDaN~ 203 (386)
T 3fv9_G 134 PVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAER---ITACLADRQ------PGEWYLADANN 203 (386)
T ss_dssp CBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHH---HHHHTTTCC------TTCEEEEECTT
T ss_pred ceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHH---HHHHHHHcC------CCCeEEEECCC
Confidence 4567788864321 1234566778899999999873 344444444 444444445 34688899764
No 237
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.89 E-value=73 Score=27.39 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=25.4
Q ss_pred HHHHHHHH-hcCcEEEEecCC-CCHHHHHHHHHHHHH
Q psy254 51 DMLEKIIE-TGMNIARLNFSH-GSYEYHGQTIKNIRQ 85 (187)
Q Consensus 51 ~~i~~li~-aGm~v~RiN~sH-g~~e~~~~~i~~ir~ 85 (187)
+.++.+++ .|+|.|||..++ -..+.|.++++.+|+
T Consensus 214 ~~~~~w~~~~gvDGfR~Da~~~i~~~f~~~~~~~~~~ 250 (480)
T 1ud2_A 214 DWGSWFTDELDLDGYRLDAIKHIPFWYTSDWVRHQRN 250 (480)
T ss_dssp HHHHHHHHHHTCSEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCEEEEcchhhCCHHHHHHHHHHHHH
Confidence 34455564 899999999984 556667777777766
No 238
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=27.84 E-value=65 Score=29.05 Aligned_cols=51 Identities=14% Similarity=0.306 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCcEEEEecCC---CCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeE
Q psy254 51 DMLEKIIETGMNIARLNFSH---GSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIR 112 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sH---g~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIR 112 (187)
+..++|+++|+++.=||... ...+++.+++..|++. . .++|.+|+.=|++-
T Consensus 344 ~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~---~--------~vpisIDT~~~~v~ 397 (566)
T 1q7z_A 344 KEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYV---S--------NVPLSLDIQNVDLT 397 (566)
T ss_dssp HHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHH---T--------CSCEEEECCCHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhh---C--------CceEEEeCCCHHHH
Confidence 45678999999999999764 3466777777777432 2 36788999877764
No 239
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=27.58 E-value=70 Score=26.51 Aligned_cols=29 Identities=14% Similarity=-0.065 Sum_probs=24.7
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 62 NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 62 ~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
+.+||+++|-+.++..+.++.++++.++.
T Consensus 390 ~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 418 (422)
T 3d6k_A 390 ENIRLAPSLPPVAELEVAMDGFATCVLMA 418 (422)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999988999999999998876654
No 240
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=27.56 E-value=2.1e+02 Score=24.43 Aligned_cols=52 Identities=21% Similarity=0.308 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCC--------------------HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGS--------------------YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~--------------------~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.++++++.|.+.+.+.+.... .++..+.++.++.+.+..+ ..+.|++|.-|
T Consensus 160 ~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG------~d~~L~vDaN~ 231 (422)
T 3tji_A 160 ASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYG------WKLHILHDVHE 231 (422)
T ss_dssp HHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHC------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcC------CCCEEEEECCC
Confidence 4456778899999999885321 1234555666666666666 45788999764
No 241
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=27.38 E-value=1.1e+02 Score=25.54 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=41.7
Q ss_pred eEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 38 GIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 38 kIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..-+|+|-.+ .-.+.++++++.|.+.+.+.....+.++-.++++.||++. + .+.+++|--|
T Consensus 134 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~---~-------~~~l~vDaN~ 196 (365)
T 3ik4_A 134 ETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA---P-------TAPLIVDGNC 196 (365)
T ss_dssp EBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS---S-------SCCEEEECTT
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC---C-------CCeEEEECCC
Confidence 3345664322 1123456778889999999999887888788888888763 2 2578888754
No 242
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=27.33 E-value=1.7e+02 Score=24.83 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCcEEEEec-------------CCC---------CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNF-------------SHG---------SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~-------------sHg---------~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++.|.+.+.+.. -.+ +.+.....++.++.+.+..+ ..+.|++|..|
T Consensus 149 ~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG------~d~~l~vDaN~ 222 (409)
T 3go2_A 149 RTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAG------PDVEILLDLNF 222 (409)
T ss_dssp HHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHC------TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhC------CCCEEEEECCC
Confidence 345667789999999987 111 12234455556666656666 44688889764
No 243
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=27.22 E-value=48 Score=28.05 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=38.0
Q ss_pred hccHHHhhcCCCCCCCCCCCCCceEEEec-CCCCCCHHHH-HHHH---HhcCcEEEEecCC----------CCHHHHHHH
Q psy254 15 ANTFVDHLCGLDIDNKSSYVRLTGIICTI-GPASVAVDML-EKII---ETGMNIARLNFSH----------GSYEYHGQT 79 (187)
Q Consensus 15 ~~~~l~~~~~l~i~~~~~~~r~TkIi~Ti-GPas~~~~~i-~~li---~aGm~v~RiN~sH----------g~~e~~~~~ 79 (187)
.+.+++++..+. ....+.+++.| |-...++... +.+- .+|.+.+=||+|. .+++...++
T Consensus 111 ~~~~~~~l~~~~------~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~i 184 (354)
T 4ef8_A 111 FDFYLAYAAEQH------DYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQC 184 (354)
T ss_dssp HHHHHHHHHHTC------CTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHh------hcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHH
Confidence 345666665442 11234688888 6443333333 3333 4799999999993 244556666
Q ss_pred HHHHHHH
Q psy254 80 IKNIRQA 86 (187)
Q Consensus 80 i~~ir~a 86 (187)
++.+|++
T Consensus 185 l~av~~~ 191 (354)
T 4ef8_A 185 LTAVSEV 191 (354)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 244
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=27.11 E-value=92 Score=25.85 Aligned_cols=63 Identities=13% Similarity=0.033 Sum_probs=39.5
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+....+|+|-.+ .-.+..+++.++|-+.+.|++.| +.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g------~~~~l~vDan~ 199 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG-EPVTDAKRITAALAN---QQ------PDEFFIVDANG 199 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS-CHHHHHHHHHHHTTT---CC------TTCEEEEECTT
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC-CHHHHHHHHHHHHHh---cC------CCCEEEEECCC
Confidence 456677775321 11244566778899999999987 455555555555544 44 34678888754
No 245
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=26.91 E-value=2.3e+02 Score=22.14 Aligned_cols=51 Identities=8% Similarity=0.098 Sum_probs=41.3
Q ss_pred ceEEEec-----CCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy254 37 TGIICTI-----GPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 37 TkIi~Ti-----GPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~ 88 (187)
+|||++- .| ..=.+.+++|.+.|.|+++|-.---+.++..++++..+++..
T Consensus 114 ~kvI~S~Hdf~~tp-~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~ 169 (231)
T 2ocz_A 114 PNLILSYHNFEETP-ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKT 169 (231)
T ss_dssp SSEEEEEEESSCCC-TTHHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCCCCH-HHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 8999986 34 333677888999999999999888889999988888777644
No 246
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=26.86 E-value=2.4e+02 Score=22.44 Aligned_cols=53 Identities=9% Similarity=0.127 Sum_probs=35.3
Q ss_pred EEEecCCCCCCHHHHHHHHHh-cC-----------cEEEEec-CCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPASVAVDMLEKIIET-GM-----------NIARLNF-SHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~a-Gm-----------~v~RiN~-sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.+.+.+.....+..+.|.+. |+ +.+||++ ++. +.++..+.++.++++.++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 318 TTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 335552122334555567654 63 4789999 544 68889999999999888776
No 247
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=26.82 E-value=2.2e+02 Score=24.09 Aligned_cols=68 Identities=12% Similarity=0.167 Sum_probs=45.1
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCC--------------------HHHHHHHHHHHHHHHHHhCCC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGS--------------------YEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~--------------------~e~~~~~i~~ir~a~~~~~~~ 93 (187)
+....++++..+ .-.+..++++++|-+.+++...... .+...+.++.++.+.+..|
T Consensus 142 ~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G-- 219 (421)
T 4hnl_A 142 AIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYG-- 219 (421)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhC--
Confidence 445666664322 2245677889999999999876421 2345566777777777777
Q ss_pred CCCcceeEEEeeCCCC
Q psy254 94 IGMPHALAIALDTKGP 109 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~GP 109 (187)
..+.|++|.-+.
T Consensus 220 ----~~~~l~vDan~~ 231 (421)
T 4hnl_A 220 ----NQFQMLHDVHER 231 (421)
T ss_dssp ----TSSEEEEECTTC
T ss_pred ----CCceEecccccc
Confidence 457999998653
No 248
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=26.81 E-value=2.1e+02 Score=23.00 Aligned_cols=21 Identities=10% Similarity=0.071 Sum_probs=18.4
Q ss_pred CHHHHHHHHHhcCcEEEEecC
Q psy254 49 AVDMLEKIIETGMNIARLNFS 69 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~s 69 (187)
+.+.++..+++|++.+|+-++
T Consensus 82 ~~~~i~~a~~ag~~~v~i~~~ 102 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEVVIFGA 102 (298)
T ss_dssp SHHHHHHHHHTTCSEEEEEEE
T ss_pred CHHhHHHHHHCCCCEEEEEec
Confidence 578899999999999999655
No 249
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=26.81 E-value=1.4e+02 Score=23.34 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=33.4
Q ss_pred EecCCCCCCHHHHHHHHHhcCc-----------EEEEec-CCCCHHHHH-HHHHHHHHHHH
Q psy254 41 CTIGPASVAVDMLEKIIETGMN-----------IARLNF-SHGSYEYHG-QTIKNIRQAVE 88 (187)
Q Consensus 41 ~TiGPas~~~~~i~~li~aGm~-----------v~RiN~-sHg~~e~~~-~~i~~ir~a~~ 88 (187)
..+.+.....+..+.|.+.|+- .+||++ ++.+.++.. +.++.++++.+
T Consensus 291 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 291 VRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp EECCTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 5552223345666778888753 489998 667888888 89988887654
No 250
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=26.78 E-value=61 Score=25.26 Aligned_cols=50 Identities=22% Similarity=0.423 Sum_probs=30.8
Q ss_pred ceEEEecC-CCCCC-----HHHHHHHHHhcCcEEE--EecCC---CCHHHHHHHHHHHHHH
Q psy254 37 TGIICTIG-PASVA-----VDMLEKIIETGMNIAR--LNFSH---GSYEYHGQTIKNIRQA 86 (187)
Q Consensus 37 TkIi~TiG-Pas~~-----~~~i~~li~aGm~v~R--iN~sH---g~~e~~~~~i~~ir~a 86 (187)
.++.+.+| |...+ ....+..+++|.+..- +|++. +..+...+.++.+|++
T Consensus 54 v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a 114 (225)
T 1mzh_A 54 VKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRE 114 (225)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CceeeEecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHH
Confidence 46666665 54321 3445678899999999 78876 4555444445444443
No 251
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=26.78 E-value=1.5e+02 Score=21.47 Aligned_cols=63 Identities=17% Similarity=0.242 Sum_probs=37.3
Q ss_pred EEEecCCCCCCHHHHHHHHHhc-CcEEEEecCCCC-HHHHHHHHHHHHHHHHHh-CCCCCCcceeEEEeeCCC
Q psy254 39 IICTIGPASVAVDMLEKIIETG-MNIARLNFSHGS-YEYHGQTIKNIRQAVENY-SKRIGMPHALAIALDTKG 108 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aG-m~v~RiN~sHg~-~e~~~~~i~~ir~a~~~~-~~~~~~~~~v~I~~Dl~G 108 (187)
||+|-|+-+.....--+|+-.- -++.=++|..+. +++ ..+.++++.++. ... ..|-|+.|+-|
T Consensus 7 ii~sHG~~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~---~~~~i~~~i~~~~~~~----~gvliLtDl~G 72 (144)
T 3lfh_A 7 LIITHGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEV---VRKEVEKIIKEKLQED----KEIIIVVDLFG 72 (144)
T ss_dssp EEEEETTHHHHHHHHHHHHHCCCSSEEEEEECTTCCHHH---HHHHHHHHHHHHHTTT----CEEEEEESSSS
T ss_pred EEEeCcHHHHHHHHHHHHHcCCCCcEEEEEccCCCCHHH---HHHHHHHHHHHhhCCC----CcEEEEEeCCC
Confidence 6778898544433344455322 378889997655 343 344445554444 211 56899999965
No 252
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.65 E-value=1.8e+02 Score=23.35 Aligned_cols=56 Identities=11% Similarity=0.037 Sum_probs=37.7
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 73 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 73 QIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 567888777644 23466677788999988776554333335677777788777765
No 253
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=26.61 E-value=1.6e+02 Score=24.95 Aligned_cols=46 Identities=13% Similarity=0.296 Sum_probs=34.4
Q ss_pred HHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 52 MLEKIIET-GMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 52 ~i~~li~a-Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
..+++++. |-+.+.+... .+.++-.++++.||++. - .+.+++|--|
T Consensus 175 ~a~~~~~~~G~~~~K~KvG-~~~~~d~~~v~avR~~~--~--------~~~l~vDaN~ 221 (398)
T 4dye_A 175 HAVRVVEEGGFDAVKLKGT-TDCAGDVAILRAVREAL--P--------GVNLRVDPNA 221 (398)
T ss_dssp HHHHHHHHHCCSEEEEECC-SCHHHHHHHHHHHHHHC--T--------TSEEEEECTT
T ss_pred HHHHHHHhcCCCEEEEecC-CCHHHHHHHHHHHHHhC--C--------CCeEEeeCCC
Confidence 45567777 9999999997 67777778888888775 1 2578888654
No 254
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=26.51 E-value=2.4e+02 Score=22.26 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=24.2
Q ss_pred cEEEEecCCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 62 NIARLNFSHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 62 ~v~RiN~sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.+||++++. +.++..+.++.++++.++..
T Consensus 344 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (382)
T 4eb5_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4799999864 78889999999988876654
No 255
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=26.51 E-value=94 Score=24.98 Aligned_cols=47 Identities=17% Similarity=0.271 Sum_probs=30.9
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-------------cEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-------------NIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+.+.+.+.....+..+.|.+.|+ +.+||++++ +.++..+.++.++++
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 315 LWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREA 374 (376)
T ss_dssp EEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 44555323334567777888774 468999987 777777777776653
No 256
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=26.36 E-value=86 Score=28.00 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=25.1
Q ss_pred HHHHHHH-HhcCcEEEEecC-CCCHHHHHHHHHHHHHH
Q psy254 51 DMLEKII-ETGMNIARLNFS-HGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 51 ~~i~~li-~aGm~v~RiN~s-Hg~~e~~~~~i~~ir~a 86 (187)
+.++.++ +.|+|.|||..+ |-.++.|+++.+.+++.
T Consensus 294 ~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~v~~~ 331 (601)
T 3edf_A 294 QNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAE 331 (601)
T ss_dssp HHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEeeccccCCHHHHHHHHHHHHHh
Confidence 3445566 789999999988 45566676666666543
No 257
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=26.31 E-value=1.7e+02 Score=23.59 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=37.5
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.++|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 69 rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 69 RIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 567888777643 23456677788999988776554433345677777787777655
No 258
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=26.24 E-value=58 Score=28.01 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=31.1
Q ss_pred HHHHHHHHhcCcEEEEecCCCCH------------HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSY------------EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~------------e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.++-|-.+|+|-+||-.- .++ .....++..+++| ++.| +.||+|+-.
T Consensus 52 d~~~ilk~~G~N~VRlrvw-v~p~~~~g~~y~~g~~d~~~~~~~a~~A-k~~G--------LkVlldfHy 111 (399)
T 1ur4_A 52 DIFKTLKEAGVNYVRVRIW-NDPYDANGNGYGGGNNDLEKAIQIGKRA-TANG--------MKLLADFHY 111 (399)
T ss_dssp CHHHHHHHTTCCEEEEEEC-SCCBCTTCCBCSTTCCCHHHHHHHHHHH-HHTT--------CEEEEEECS
T ss_pred hHHHHHHHCCCCEEEEeee-cCCcccccCccCCCCCCHHHHHHHHHHH-HHCC--------CEEEEEecc
Confidence 4677788899999999542 221 2345555556555 4445 788889654
No 259
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.11 E-value=1.8e+02 Score=23.35 Aligned_cols=56 Identities=11% Similarity=0.035 Sum_probs=38.0
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 69 r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 69 RVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 567888887643 23466677888999988775554433345677777888777665
No 260
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=26.07 E-value=92 Score=24.40 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhcCcEEEEecCCC-CHHHHHHHHHHHHH
Q psy254 49 AVDMLEKIIETGMNIARLNFSHG-SYEYHGQTIKNIRQ 85 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg-~~e~~~~~i~~ir~ 85 (187)
+.+.+++++++|+++.=++.++. +++...++++.+++
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 56789999999999999999986 46666677766665
No 261
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=25.96 E-value=99 Score=26.78 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHH------HHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEeeecCCCCccc
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYE------YHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRTGLLQGGGSAE 123 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e------~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRtG~~~~~~~~~ 123 (187)
..+|+.|++.|..|.= +||-..- ....+---.++.++.++ ++|...=|.-|+
T Consensus 44 lpTI~~ll~~gakVil--~SHlGRP~kg~~~~~~SL~pva~~L~~lLg------~~V~f~~d~~~~-------------- 101 (395)
T 4fey_A 44 IPTIQYILDQGGAVIL--MSHLGRPTEGEYDSQFSLEPVAKALSEIIN------KPVKFAKDWLDG-------------- 101 (395)
T ss_dssp HHHHHHHHHHTCEEEE--ECCCSCCCTTSCCGGGCSHHHHHHHHHHHC------SCEEEESSTTTC--------------
T ss_pred HHHHHHHHHCCCEEEE--EecCCCCCCCCcCcccCHHHHHHHHHHHHC------CCcEECcccccc--------------
Confidence 4799999999999765 8986532 11222222345556667 788887787653
Q ss_pred EEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCC
Q psy254 124 VELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDG 171 (187)
Q Consensus 124 i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG 171 (187)
+.|+.|+.+.|-.-.=+..+.. +.++|.+.+..---||++|.
T Consensus 102 v~l~~G~VlLLEN~RF~~~E~~------nd~~fa~~LA~l~DvyVNDA 143 (395)
T 4fey_A 102 VDVKAGEIVMCENVRFNSGEKK------STDDLSKKIASLGDVFVMDA 143 (395)
T ss_dssp CCCCTTCEEEECCGGGSTTTTT------TCHHHHHHHHHTCSEEEECC
T ss_pred cCCCCCcEEEEeecccCchhhh------cHHHHHHHHHhhCCEEEECc
Confidence 1356666655532221111111 34677777777666888884
No 262
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=25.96 E-value=92 Score=24.47 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=19.0
Q ss_pred CHHHHHHHHHhcCcEEEEecCCC
Q psy254 49 AVDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 49 ~~~~i~~li~aGm~v~RiN~sHg 71 (187)
..+.++.|.++|++..=+++...
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~ 56 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCS 56 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHcCCCEEEECCCCC
Confidence 45778899999999999987554
No 263
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=25.81 E-value=1.3e+02 Score=22.10 Aligned_cols=50 Identities=10% Similarity=0.179 Sum_probs=35.4
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCC-HHHHHHHHHHHHHHHHHhC
Q psy254 31 SSYVRLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGS-YEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 31 ~~~~r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~-~e~~~~~i~~ir~a~~~~~ 91 (187)
|...+..||++.+-|. ..|-..++|.|..|. .|..+.+.+.++++..+-+
T Consensus 90 ~~fg~s~Ki~l~~~p~-----------~~~~~~~KLsFk~GGa~eF~~~l~~al~~~~~~~~ 140 (145)
T 2cay_A 90 GFLTRSPRLILFFKDP-----------SSSTEFVQLSFRKSDGVLFSQATERALENILTEKN 140 (145)
T ss_dssp SSSSSSCEEEEEESSC-----------SSTTCCEEEEESSSCCHHHHHHHHHHHHHHHHC--
T ss_pred CccccCceEEEEecCC-----------CCCceEEEEEEcCCCchHHHHHHHHHHHHHHHhhc
Confidence 4456788999999776 456789999999766 5556677777777665543
No 264
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=25.80 E-value=1.6e+02 Score=23.63 Aligned_cols=62 Identities=16% Similarity=0.119 Sum_probs=41.9
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+.++|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 70 r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~------lPiilY 133 (291)
T 3tak_A 70 RIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE------LPLILY 133 (291)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC------SCEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC------CCEEEE
Confidence 467888777543 34566778889999988776544332334677888888887765 566544
No 265
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=25.79 E-value=2.6e+02 Score=22.40 Aligned_cols=71 Identities=7% Similarity=0.138 Sum_probs=48.8
Q ss_pred CceEEEec-----CCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcce-eEEEeeCCCC
Q psy254 36 LTGIICTI-----GPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHA-LAIALDTKGP 109 (187)
Q Consensus 36 ~TkIi~Ti-----GPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~-v~I~~Dl~GP 109 (187)
.+|||++- .|+ +=.+.+.+|.+.|.|+++|-.---+.++..++++..+++...... .| +++.|--.|.
T Consensus 144 ~~kiI~S~Hdf~~tp~-el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~-----~PlIa~~MG~~G~ 217 (259)
T 3l9c_A 144 FSNLILSYHNFEETPE-NLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPN-----QEYVTMSMSKLGR 217 (259)
T ss_dssp CSSEEEEEEESSCCCT-THHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTT-----SEEEEEECTGGGH
T ss_pred cCeEEEEeccCCCCHH-HHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHHhccCC-----CCEEEEECCCCcc
Confidence 45888876 233 446778889999999999999888899888888887776443211 34 3555544444
Q ss_pred eeE
Q psy254 110 EIR 112 (187)
Q Consensus 110 kIR 112 (187)
--|
T Consensus 218 ~SR 220 (259)
T 3l9c_A 218 ISR 220 (259)
T ss_dssp HHH
T ss_pred cHH
Confidence 444
No 266
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=25.70 E-value=2.4e+02 Score=23.73 Aligned_cols=67 Identities=16% Similarity=0.246 Sum_probs=39.7
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCC--------------------HHHHHHHHHHHHHHHHHhCCC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGS--------------------YEYHGQTIKNIRQAVENYSKR 93 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~--------------------~e~~~~~i~~ir~a~~~~~~~ 93 (187)
+....+|++-.+ .-.+..+++++.|.+.+.+.+.... .++....++.++.+.+..+
T Consensus 122 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G-- 199 (401)
T 3sbf_A 122 AIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYG-- 199 (401)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHT--
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcC--
Confidence 344555553211 1234556778899999999985321 1224455555555555666
Q ss_pred CCCcceeEEEeeCCC
Q psy254 94 IGMPHALAIALDTKG 108 (187)
Q Consensus 94 ~~~~~~v~I~~Dl~G 108 (187)
..+.|++|..|
T Consensus 200 ----~d~~l~vDan~ 210 (401)
T 3sbf_A 200 ----NQFHILHDVHE 210 (401)
T ss_dssp ----TSSEEEEECTT
T ss_pred ----CCCEEEEECCC
Confidence 44688899764
No 267
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=25.56 E-value=87 Score=25.00 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=31.0
Q ss_pred ceEEEecCCC-CCCHHHHHHHHH--hcCcEEEEecC-----CC------CHHHHHHHHHHHHHH
Q psy254 37 TGIICTIGPA-SVAVDMLEKIIE--TGMNIARLNFS-----HG------SYEYHGQTIKNIRQA 86 (187)
Q Consensus 37 TkIi~TiGPa-s~~~~~i~~li~--aGm~v~RiN~s-----Hg------~~e~~~~~i~~ir~a 86 (187)
..+++-|+-. .++.....+++. +|.+.+-|||+ ++ +.+...++++.+|++
T Consensus 99 ~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~ 162 (311)
T 1ep3_A 99 LPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV 162 (311)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh
Confidence 4677777533 333444445555 89999999997 32 344456666666643
No 268
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=25.54 E-value=73 Score=27.14 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=20.6
Q ss_pred hcCCCCCEEEEeCCeEEEEEEEEeC
Q psy254 158 KVVKPGSRIFVDDGLISLVVKSIVK 182 (187)
Q Consensus 158 ~~v~~Gd~IlidDG~i~l~V~~v~~ 182 (187)
+.+++|++|+++|| +..+|.+..+
T Consensus 111 kk~k~G~~l~f~~~-l~a~v~~~~~ 134 (347)
T 1vky_A 111 QKVKKGTELVIDED-LSAVCLGRGE 134 (347)
T ss_dssp TTCCTTCEEEEETT-EEEEEEEECT
T ss_pred CCCCCCCEEEeCCC-eEEEEEEeeC
Confidence 68899999999988 8888888753
No 269
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=25.41 E-value=31 Score=29.33 Aligned_cols=51 Identities=31% Similarity=0.352 Sum_probs=39.9
Q ss_pred CceEEEecCCC---CCCHHHHHHHHHhc--------------------------CcEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 36 LTGIICTIGPA---SVAVDMLEKIIETG--------------------------MNIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 36 ~TkIi~TiGPa---s~~~~~i~~li~aG--------------------------m~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
.=||+...||| +...+-|.+|+++| |++.+=.-..+.|.-|...|..||++
T Consensus 135 gG~Iv~V~GPAvvhtga~~ala~LIr~GYV~~LlaGNAlAtHDiE~~l~gTsLG~di~t~~~v~~GH~~Hl~~IN~irr~ 214 (345)
T 3c2q_A 135 TGGIAIVGGPAIIHTGGGPALAKMVELGYIQAILAGNALATHDIESALYGTSLGVNIKTAKPVTGGHKHHIYAINAINDA 214 (345)
T ss_dssp SCCEEEEECTHHHHTTCHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHSEETTEETTTCCBCTTGGGHHHHHHHHHHHH
T ss_pred CCeEEEEecCeEecCCcHHHHHHHHHcCccceEeccchHhHhhHHHHhhccccCccccccccCCCchHHHHHHHHHHHHc
Confidence 45899999996 67889999999876 34444444456788999999999986
No 270
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=25.41 E-value=2.7e+02 Score=22.44 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=36.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCC----------CCHHHHHHHHHHHHHHHHHhC
Q psy254 35 RLTGIICTIGPASVAVDMLEKIIETGMNIARLNFSH----------GSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 35 r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sH----------g~~e~~~~~i~~ir~a~~~~~ 91 (187)
..+++.+-+ | +.+.++..+++|++.+|+-.+- -+.++..+++..+-+.+++.|
T Consensus 75 ~~~~~~~l~-~---~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G 137 (302)
T 2ftp_A 75 PGVTYAALA-P---NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ 137 (302)
T ss_dssp TTSEEEEEC-C---SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEe-C---CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC
Confidence 355666544 3 7899999999999999974332 345666666666555666666
No 271
>2f9h_A PTS system, IIA component; alpha-beta structure, beta-barrel, dimer, structural genomic protein structure initiative; 1.57A {Enterococcus faecalis} SCOP: b.161.1.1
Probab=25.38 E-value=52 Score=23.95 Aligned_cols=32 Identities=6% Similarity=0.230 Sum_probs=24.0
Q ss_pred EeeCcchhh-hcCCCCCEEEEeCCeEEEEEEEEeC
Q psy254 149 LYVDYTNIT-KVVKPGSRIFVDDGLISLVVKSIVK 182 (187)
Q Consensus 149 i~v~~~~l~-~~v~~Gd~IlidDG~i~l~V~~v~~ 182 (187)
+-.+..++- ..+++||.+.||+ -..+|+.|++
T Consensus 43 vih~~~~~~~~~i~~Gd~l~i~~--~~Y~ItaVG~ 75 (129)
T 2f9h_A 43 VIQSFPEKDQVTLAEGDHLKIGD--TNYTITKVGS 75 (129)
T ss_dssp EEEECTTGGGCCCCTTCEEEETT--EEEEEEEECT
T ss_pred EEEEcCCCCcCCcCCCCEEEECC--EEEEEEEEhH
Confidence 334555666 7999999999986 4677788764
No 272
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=25.36 E-value=1.1e+02 Score=25.71 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=15.8
Q ss_pred HHHHHhcCcEEEEecCCCC
Q psy254 54 EKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 54 ~~li~aGm~v~RiN~sHg~ 72 (187)
+...++|.|..-||++||-
T Consensus 168 ~~a~~aGfDgVeih~a~Gy 186 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGY 186 (364)
T ss_dssp HHHHHTTCSEEEEEECTTS
T ss_pred HHHHHcCCCEEEEcCccch
Confidence 3457899999999999974
No 273
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=25.26 E-value=1.5e+02 Score=25.25 Aligned_cols=67 Identities=7% Similarity=0.075 Sum_probs=40.0
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCC-----------------------------CHHHHHHHHHHHH
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHG-----------------------------SYEYHGQTIKNIR 84 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg-----------------------------~~e~~~~~i~~ir 84 (187)
+...-+|++-.+ .-.+..+++++.|.+.+.+..... +.++..+.++.++
T Consensus 138 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~ 217 (424)
T 3v3w_A 138 RILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFA 217 (424)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHH
T ss_pred ceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 344555553211 113445678889999999987530 0123455566666
Q ss_pred HHHHHhCCCCCCcceeEEEeeCCC
Q psy254 85 QAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 85 ~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+.+..+ ..+.|++|..|
T Consensus 218 avR~avG------~d~~l~vDaN~ 235 (424)
T 3v3w_A 218 AVRKEFG------PDIHLLHDVHH 235 (424)
T ss_dssp HHHHHHC------SSSEEEEECTT
T ss_pred HHHHHcC------CCCcEEEeCCC
Confidence 6666666 44688889764
No 274
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=25.00 E-value=88 Score=26.86 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=25.1
Q ss_pred HHHHHHH-hcCcEEEEecCC-CCHHHHHHHHHHHHHH
Q psy254 52 MLEKIIE-TGMNIARLNFSH-GSYEYHGQTIKNIRQA 86 (187)
Q Consensus 52 ~i~~li~-aGm~v~RiN~sH-g~~e~~~~~i~~ir~a 86 (187)
.++-+++ .|+|.||+..++ -..+.|+++.+.+|+.
T Consensus 215 ~~~~w~~~~gvDGfR~Da~~~i~~~f~~~~~~~~~~~ 251 (483)
T 3bh4_A 215 WGIWYANELSLDGFRIDAAKHIKFSFLRDWVQAVRQA 251 (483)
T ss_dssp HHHHHHHHHTCCEEEETTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEechhcCCHHHHHHHHHHHHHh
Confidence 3444564 899999999985 4566677777777663
No 275
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=24.97 E-value=2.1e+02 Score=23.91 Aligned_cols=62 Identities=13% Similarity=0.275 Sum_probs=40.6
Q ss_pred eEEEecCCCC--CCHHHHHHHHH-hcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 38 GIICTIGPAS--VAVDMLEKIIE-TGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 38 kIi~TiGPas--~~~~~i~~li~-aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+-+|+|-.+ ...+..+++++ .|-+.+.+.......++-.++++.||++. + ..+.+++|--|
T Consensus 139 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~---g------~~~~l~vDaN~ 203 (382)
T 3dgb_A 139 PVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL---G------DSASVRVDVNQ 203 (382)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH---G------GGSEEEEECTT
T ss_pred eEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc---C------CCCeEEEeCCC
Confidence 3345664321 12334456666 59999999998877777777777777654 3 33688889654
No 276
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=24.95 E-value=1e+02 Score=21.81 Aligned_cols=64 Identities=19% Similarity=0.232 Sum_probs=38.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhc-CcEEEEecCCCC-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 39 IICTIGPASVAVDMLEKIIETG-MNIARLNFSHGS-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aG-m~v~RiN~sHg~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
||+|-|+-+......-+++... -++.=++|..+. .++ ..+.++++.++.... ..+-|+.|+-|-
T Consensus 5 ii~sHG~~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~---~~~~i~~~i~~~~~~----~gvliLtDl~GG 70 (135)
T 1pdo_A 5 VIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET---LIEKYNAQLAKLDTT----KGVLFLVDTWGG 70 (135)
T ss_dssp EEECSBTHHHHHHHHHHHHHCCCSSEEEECBCTTCCHHH---HHHHHHHHHTTSCCT----TCEEEEESSTTS
T ss_pred EEEeChHHHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHH---HHHHHHHHHHhcCCC----CCEEEEEECCCC
Confidence 6778887444333344455322 578888887654 443 444555666554321 458999999653
No 277
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=24.77 E-value=2.2e+02 Score=23.56 Aligned_cols=48 Identities=21% Similarity=0.336 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++.|.+.+.+.... +.++-.++++.||++ .+ ..+.+++|-.|
T Consensus 146 ~~a~~~~~~G~~~~K~KvG~-~~~~d~~~v~avR~~---~g------~~~~l~vDaN~ 193 (368)
T 3q45_A 146 ADAVQIKKNGFEIIKVKVGG-SKELDVERIRMIREA---AG------DSITLRIDANQ 193 (368)
T ss_dssp HHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH---HC------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCeEEEEecC-CHHHHHHHHHHHHHH---hC------CCCeEEEECCC
Confidence 44566788999999999874 355555566666654 45 34678888654
No 278
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=24.76 E-value=1.4e+02 Score=24.37 Aligned_cols=63 Identities=14% Similarity=0.255 Sum_probs=41.3
Q ss_pred CceEEEecCCCC-CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEe
Q psy254 36 LTGIICTIGPAS-VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIAL 104 (187)
Q Consensus 36 ~TkIi~TiGPas-~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~ 104 (187)
+.++|+-+|-++ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++=
T Consensus 81 rvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiilYn 144 (314)
T 3d0c_A 81 RATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD------APSIIYF 144 (314)
T ss_dssp SSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS------SCEEEEE
T ss_pred CCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC------CCEEEEe
Confidence 567888887721 23456677788899988775443332234567778888777765 5666554
No 279
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=24.60 E-value=1.1e+02 Score=22.11 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=37.1
Q ss_pred eEEEecCC-CCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHH--hCCCCCCcceeEEEeeC
Q psy254 38 GIICTIGP-ASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVEN--YSKRIGMPHALAIALDT 106 (187)
Q Consensus 38 kIi~TiGP-as~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~--~~~~~~~~~~v~I~~Dl 106 (187)
=||+|-|+ -..+....-+++..--++.=++|..+..- .++.+.++++.++ .... .-|-|+.|+
T Consensus 7 iiIvtHG~s~A~~l~~~a~~i~G~~~~~aid~~~~~~~--~~~~~~i~~~i~~~~~d~g----~GVLiL~Dm 72 (139)
T 3gdw_A 7 VFVLMHGDSTASSMLKTAQELLGTSIGTAMNMPLTMEV--QTMYEQLRNQVITQKESLN----NGILLLTDM 72 (139)
T ss_dssp EEEEEESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCH--HHHHHHHHHHHHTSTGGGT----TCEEEEECS
T ss_pred EEEEcCCHHHHHHHHHHHHHHcCcccEEEEEccCCCCH--HHHHHHHHHHHHhhcCCCC----CCEEEEEeC
Confidence 36788899 33333333344432256777888777632 2555666666655 2111 459999999
No 280
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=24.43 E-value=51 Score=28.19 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=24.0
Q ss_pred HHHHHHHHhcCcEEEEecCC-CCHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFSH-GSYEYHGQTIKNIR 84 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sH-g~~e~~~~~i~~ir 84 (187)
+.++.+++.|++.||+..++ -..+.|.++++.+|
T Consensus 158 ~~~~~w~~~gvDGfR~D~~~~i~~~~~~~~~~~~~ 192 (448)
T 1g94_A 158 AYINDLQAIGVKGFRFDASKHVAASDIQSLMAKVN 192 (448)
T ss_dssp HHHHHHHHHTCCEEEEETGGGSCHHHHHHHHHTSC
T ss_pred HHHHHHHhcCCCEEeecccccCCHHHHHHHHHHhc
Confidence 45666777899999999984 55666665555443
No 281
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=24.37 E-value=1.9e+02 Score=23.24 Aligned_cols=62 Identities=8% Similarity=0.044 Sum_probs=41.1
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 71 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~------lPiilY 134 (292)
T 3daq_A 71 RVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVK------LPVVLY 134 (292)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC------SCEEEE
T ss_pred CCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC------CCEEEE
Confidence 567888776433 34566777888999988776544332334577788888777766 666544
No 282
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=24.32 E-value=1.9e+02 Score=23.98 Aligned_cols=53 Identities=11% Similarity=0.152 Sum_probs=41.3
Q ss_pred eEEEecCCCCCCHHHHHHHHHh--------cCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 38 GIICTIGPASVAVDMLEKIIET--------GMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~a--------Gm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.|+.-+ ..+.+.+.+++.+++ |.+-..|..||-+.++..+.-..+-+.+...+
T Consensus 84 PVaLHl-DHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~g 144 (306)
T 3pm6_A 84 PITLHL-DHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARG 144 (306)
T ss_dssp CEEEEE-EEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEc-CCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 455444 555788999999999 99999999999999877776666666665544
No 283
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=24.19 E-value=2e+02 Score=23.23 Aligned_cols=65 Identities=8% Similarity=0.009 Sum_probs=43.6
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++ +.+
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiilY-n~P 143 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD------IPVLLY-NVP 143 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS------SCEEEE-ECH
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC------CCEEEE-eCc
Confidence 577888776533 34566777888999988876544333344678888888877765 666544 443
No 284
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=24.18 E-value=1.9e+02 Score=20.86 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=37.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhc-CcEEEEecCCCC-HHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 39 IICTIGPASVAVDMLEKIIETG-MNIARLNFSHGS-YEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aG-m~v~RiN~sHg~-~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
||+|-|+-+......-+++-.- -++.=++|..+. ++ ...+.++++.++.... ..|-|+.|+-|
T Consensus 5 ii~sHg~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~---~~~~~i~~~i~~~~~~----~gvlvLtDl~G 69 (150)
T 3ipr_A 5 VIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQ---ALGGQIKTAIENVQQG----DGVLVMVDLLS 69 (150)
T ss_dssp EEEEETTHHHHHHHHHHHHHSCCCSEEEEEECTTCCHH---HHHHHHHHHHHHHCSS----SCEEEEESSTT
T ss_pred EEEECcHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHH---HHHHHHHHHHHhcCCC----CCEEEEEeCCC
Confidence 6788886444333334444322 478888887554 34 3444555555555321 45899999965
No 285
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=24.14 E-value=1.4e+02 Score=25.04 Aligned_cols=61 Identities=11% Similarity=0.219 Sum_probs=40.4
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+.....|+|- .++ +..+++.++|-+.+.++..+ +.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 134 ~vp~~~~~g~--~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~~~e~v~avR~a---~g------~d~~l~vDan~ 198 (397)
T 2qde_A 134 RIPLGLVLGA--GEPEAVAEEALAVLREGFHFVKLKAGG-PLKADIAMVAEVRRA---VG------DDVDLFIDING 198 (397)
T ss_dssp SEEBCEECCC--SCHHHHHHHHHHHHHHTCSCEEEECCS-CHHHHHHHHHHHHHH---HC------TTSCEEEECTT
T ss_pred CcceEEECCC--CCHHHHHHHHHHHHHhhhhheeecccC-CHHHHHHHHHHHHHh---hC------CCCEEEEECCC
Confidence 3455577763 233 34566788999999999885 555566667666665 34 23577888654
No 286
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=24.01 E-value=2.1e+02 Score=23.46 Aligned_cols=53 Identities=9% Similarity=0.063 Sum_probs=28.9
Q ss_pred HHHHHHHhcCcE--EEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCee
Q psy254 52 MLEKIIETGMNI--ARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEI 111 (187)
Q Consensus 52 ~i~~li~aGm~v--~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkI 111 (187)
..++.++.|++. +++|+.-+...+..+.+..+++++.+++ .|+- +.+..|+++
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G------lpvI-ie~~~G~~~ 184 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG------MPTM-AVTGVGKDM 184 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT------CCEE-EEECC----
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC------CEEE-EECCCCCcc
Confidence 467788999885 4666664444444455555555555555 4443 335555544
No 287
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=23.97 E-value=94 Score=28.70 Aligned_cols=36 Identities=19% Similarity=0.422 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCcEEEEecCC-CCHHHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFSH-GSYEYHGQTIKNIRQA 86 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sH-g~~e~~~~~i~~ir~a 86 (187)
+.++.+++.|++.||+..++ -.++.|+++.+.+++.
T Consensus 398 ~~l~~Wi~~GVDGfRlD~a~~~~~~f~~~~~~~v~~~ 434 (695)
T 3zss_A 398 RILRHWMDHGVRIFRVDNPHTKPVAFWERVIADINGT 434 (695)
T ss_dssp HHHHHHHHTTCCEEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCcchhhHHHHHHHHHHHHhh
Confidence 55666778999999998885 4577788877777754
No 288
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=23.90 E-value=2.1e+02 Score=22.43 Aligned_cols=47 Identities=11% Similarity=0.179 Sum_probs=33.5
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC----------cEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM----------NIARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm----------~v~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
+.+.+.. ...+..+.|.+.|+ +.+||+++ +.++..+.++.++++.++
T Consensus 295 ~~~~~~~--~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 295 VFHQLVV--PLKDYQTHMADAGVLIGRAFPPADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp EEEECSS--CHHHHHHHHHHTTEECCCCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred EEEECCC--CHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 4555532 34566677888775 35699986 788999999999887653
No 289
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=23.69 E-value=94 Score=28.26 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCcEEEEecC-CCCHHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFS-HGSYEYHGQTIKNIRQ 85 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s-Hg~~e~~~~~i~~ir~ 85 (187)
+.++.+++.|+|.|||... |-..+.++++.+.+++
T Consensus 214 ~~l~~Wl~~GVDGfRlDa~~~i~~~f~~~~~~~v~~ 249 (683)
T 3bmv_A 214 SAIKVWLDMGIDGIRLDAVKHMPFGWQKNFMDSILS 249 (683)
T ss_dssp HHHHHHHHTTCCEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeccccCCHHHHHHHHHHHHh
Confidence 4566677899999999966 5666666666666554
No 290
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=23.46 E-value=1.5e+02 Score=23.84 Aligned_cols=56 Identities=9% Similarity=0.045 Sum_probs=37.7
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+..-+-..-....+++..++.++..+
T Consensus 69 r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 69 RVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 456777776643 23466677788999988887665433345677777777777655
No 291
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=23.46 E-value=2e+02 Score=23.31 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=37.3
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.++|+-+|..+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 85 rvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 85 RAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp TSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 567888787644 23566777888999987775443322235677778888777655
No 292
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=23.42 E-value=1.7e+02 Score=23.56 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHhcC-------cEEEEecCCC-CHHHHHHHHHHHHHHHH
Q psy254 48 VAVDMLEKIIETGM-------NIARLNFSHG-SYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 48 ~~~~~i~~li~aGm-------~v~RiN~sHg-~~e~~~~~i~~ir~a~~ 88 (187)
...+..+.|.+.|+ +.+||.++.. +.++..+.++.++++.+
T Consensus 345 ~~~~~~~~l~~~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 345 KVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp CHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 34567778888885 5789987655 78889999999988764
No 293
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=23.42 E-value=1.3e+02 Score=24.71 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=25.2
Q ss_pred cEEEEecCCC-CHHHHHHHHHHHHHHHHHhC
Q psy254 62 NIARLNFSHG-SYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 62 ~v~RiN~sHg-~~e~~~~~i~~ir~a~~~~~ 91 (187)
+++||++++. +.++..+.++.++++.++..
T Consensus 399 ~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 399 NAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 6899999876 69999999999998876654
No 294
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=23.36 E-value=57 Score=27.80 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=21.6
Q ss_pred hcCCCCCEEEEeCCeEEEEEEEEeC
Q psy254 158 KVVKPGSRIFVDDGLISLVVKSIVK 182 (187)
Q Consensus 158 ~~v~~Gd~IlidDG~i~l~V~~v~~ 182 (187)
+.+++|++|+++||.+..+|.+..+
T Consensus 104 kk~k~G~~l~f~~~~l~a~v~~~~~ 128 (346)
T 1yy3_A 104 KRVKKGTVVTFGDGRLKAICTEELE 128 (346)
T ss_dssp GGSCTTCEEEETTSSSEEEEEEECT
T ss_pred CCCCCCCEEEECCCcEEEEEEEeeC
Confidence 6889999999998878889988744
No 295
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=23.21 E-value=86 Score=25.38 Aligned_cols=41 Identities=27% Similarity=0.404 Sum_probs=30.7
Q ss_pred CHHHHHHHHH-hcC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 49 AVDMLEKIIE-TGM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 49 ~~~~i~~li~-aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
..+..+.|.+ .|+ +.+||++++ +.++..+.++.++++.+++
T Consensus 351 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 351 PAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 3455566665 475 446999997 8999999999999887654
No 296
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=23.05 E-value=1.9e+02 Score=24.20 Aligned_cols=63 Identities=11% Similarity=0.217 Sum_probs=39.2
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASV--AVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~--~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+...-+|+|-.+. -.+..+++++.|.+.+.+.... +.++-.++++.||+ ..+ ..+.+++|--|
T Consensus 131 ~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~-~~~~d~~~v~avR~---a~g------~~~~L~vDaN~ 195 (379)
T 3r0u_A 131 SIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA-DFNRDIQLLKALDN---EFS------KNIKFRFDANQ 195 (379)
T ss_dssp EEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHH---HCC------TTSEEEEECTT
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC-CHHHHHHHHHHHHH---hcC------CCCeEEEeCCC
Confidence 3445567754321 1245566778899999999964 45555555555554 445 33688889654
No 297
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=23.04 E-value=1.9e+02 Score=20.56 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=38.8
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 37 TGIICTIGPASVAVDMLEKIIETG-MNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 37 TkIi~TiGPas~~~~~i~~li~aG-m~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
-=||+|-|+-+......-+++... -++.=++|-.+..- ....+.++++.++... .-|-|+.|+-|-
T Consensus 7 ~iiivsHG~~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~--~~~~~~i~~~i~~~~~-----~gvliLtDl~GG 73 (142)
T 3bed_A 7 KLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGL--SGTQAKLAAILKEAGN-----VPTLVLADLXGG 73 (142)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCTTCCCEEEEECTTTHH--HHHHHHHHHHHHHHCS-----CCEEEEESSTTS
T ss_pred cEEEEcChHHHHHHHHHHHHHcCCCCCEEEEEecCCCCH--HHHHHHHHHHHHhcCC-----CCEEEEEECCCC
Confidence 347788898544443444455322 57888888766532 2344455565555542 248999999543
No 298
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=23.00 E-value=1.1e+02 Score=25.38 Aligned_cols=41 Identities=15% Similarity=0.281 Sum_probs=32.6
Q ss_pred HHHHHHHHHh-cC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 50 VDMLEKIIET-GM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 50 ~~~i~~li~a-Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
.+..+.|++. |+ +.+||++++-+.++..+.++.++++.+++
T Consensus 378 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 378 MELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp HHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 3566777776 64 45899999879999999999999887764
No 299
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=22.98 E-value=1e+02 Score=26.48 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=25.8
Q ss_pred HHHHHHH-HhcCcEEEEecCC-CCHHHHHHHHHHHHHH
Q psy254 51 DMLEKII-ETGMNIARLNFSH-GSYEYHGQTIKNIRQA 86 (187)
Q Consensus 51 ~~i~~li-~aGm~v~RiN~sH-g~~e~~~~~i~~ir~a 86 (187)
+.++-++ +.|+|.||+..++ -..+.|.++.+.+|+.
T Consensus 219 ~~~~~w~~~~gvDGfR~Da~~~i~~~f~~~~~~~~~~~ 256 (485)
T 1wpc_A 219 NWGVWYTNTLGLDGFRIDAVKHIKYSFTRDWINHVRSA 256 (485)
T ss_dssp HHHHHHHHHHTCSEEEETTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEhHhhhcCCHHHHHHHHHHHHHh
Confidence 3455556 4899999999984 5566777777777663
No 300
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=22.91 E-value=1.3e+02 Score=25.05 Aligned_cols=17 Identities=24% Similarity=0.638 Sum_probs=14.3
Q ss_pred HHHHhcCcEEEEecCCC
Q psy254 55 KIIETGMNIARLNFSHG 71 (187)
Q Consensus 55 ~li~aGm~v~RiN~sHg 71 (187)
...++|.|..=||++||
T Consensus 152 ~a~~aGfDgVEih~a~G 168 (340)
T 3gr7_A 152 RAKEAGFDVIEIHAAHG 168 (340)
T ss_dssp HHHHHTCSEEEEEECTT
T ss_pred HHHHcCCCEEEEccccc
Confidence 34578999999999994
No 301
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=22.89 E-value=1.9e+02 Score=23.69 Aligned_cols=62 Identities=16% Similarity=0.095 Sum_probs=41.6
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 92 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiilY 155 (314)
T 3qze_A 92 RIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA------IPQILY 155 (314)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC------SCEEEE
T ss_pred CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC------CCEEEE
Confidence 467888776543 34567778889999988776543333334677888888877765 566554
No 302
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=22.86 E-value=2.6e+02 Score=23.63 Aligned_cols=53 Identities=9% Similarity=0.091 Sum_probs=34.8
Q ss_pred HHHHHHHHHhcCcEEEEec------CCC---CHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 50 VDMLEKIIETGMNIARLNF------SHG---SYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~------sHg---~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.+..+++++.|.+.+.++. --| +.+...+-++.++++.+..+ ..+.|++|.-|
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g------~d~~l~vDaN~ 222 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVG------QRIEIMCELHS 222 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHT------TSSEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcC------CCceEEEECCC
Confidence 4567789999999999942 111 33445555666666666666 34688999764
No 303
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=22.86 E-value=1.9e+02 Score=23.39 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=34.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-----------cEEEEecCC-CCHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-----------NIARLNFSH-GSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-----------~v~RiN~sH-g~~e~~~~~i~~ir~a~~ 88 (187)
+...+.+.....+..+.|.+.|+ +.+||+++. -+.++..+.++.++++.+
T Consensus 335 ~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 335 GTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp EEEEECTTSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 44455322234566777877775 468999885 478888999998887754
No 304
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=22.80 E-value=93 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=24.3
Q ss_pred HHHHHHH-hcCcEEEEecCCC-CHHHHHHHHHHHHH
Q psy254 52 MLEKIIE-TGMNIARLNFSHG-SYEYHGQTIKNIRQ 85 (187)
Q Consensus 52 ~i~~li~-aGm~v~RiN~sHg-~~e~~~~~i~~ir~ 85 (187)
.++.+++ .|+|.||+..++. ..+.|.++++.+|+
T Consensus 334 ~l~~Wl~e~GVDGfRlDaa~~i~~~f~~~~~~~l~~ 369 (599)
T 3bc9_A 334 WGQWIINNIDFDGFRLDAVKHIDYRFIDKWMSAVQN 369 (599)
T ss_dssp HHHHHHHTTCCCEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHH
Confidence 3444555 8999999999854 56667777766665
No 305
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=22.77 E-value=1.9e+02 Score=22.86 Aligned_cols=31 Identities=13% Similarity=0.477 Sum_probs=23.9
Q ss_pred ecCCCC--CCHHHHHHHHHhcCcEEEEecCCCC
Q psy254 42 TIGPAS--VAVDMLEKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 42 TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~ 72 (187)
|.|-.+ ...+.++.|.++|+|+.=+++-..+
T Consensus 24 ~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sd 56 (262)
T 2ekc_A 24 MVGYPDYETSLKAFKEVLKNGTDILEIGFPFSD 56 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSC
T ss_pred cCCCCChHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 455544 3467899999999999999997754
No 306
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=22.74 E-value=1.6e+02 Score=23.28 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=31.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-----------cEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-----------NIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-----------~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+...+. . ...+..+.|.+.|+ +.+||+++ +.++..+.++.++++
T Consensus 308 ~~~~~~-~-~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 308 VLIDLG-I-EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp EEEECS-S-CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred EEEECC-C-CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence 444553 2 44566677888775 46799887 888888888888764
No 307
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=22.73 E-value=2.1e+02 Score=25.64 Aligned_cols=19 Identities=21% Similarity=0.123 Sum_probs=15.8
Q ss_pred HHHHHhcCcEEEEecCCCC
Q psy254 54 EKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 54 ~~li~aGm~v~RiN~sHg~ 72 (187)
+...++|.|..-||++||.
T Consensus 148 ~~a~~aGfd~veih~~~gy 166 (671)
T 1ps9_A 148 QLAREAGYDGVEVMGSEGY 166 (671)
T ss_dssp HHHHHTTCSEEEEEECBTS
T ss_pred HHHHHcCCCEEEEccccch
Confidence 4556899999999999963
No 308
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=22.63 E-value=2e+02 Score=23.79 Aligned_cols=56 Identities=11% Similarity=0.058 Sum_probs=37.5
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 103 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 103 RRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 567888777643 23466677888999988775544333334677778888777665
No 309
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=22.54 E-value=1.3e+02 Score=24.21 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFSHG--SYEYHGQTIKNIRQA 86 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg--~~e~~~~~i~~ir~a 86 (187)
+.++.+.++|++.++|--+|| +++...++++.+++.
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 344445579999888887777 477777887777754
No 310
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=22.40 E-value=1.4e+02 Score=23.73 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=30.4
Q ss_pred CHHHHHHHHHhcC--------cEEEEecCC-CCHHHHHHHHHHHHHHH
Q psy254 49 AVDMLEKIIETGM--------NIARLNFSH-GSYEYHGQTIKNIRQAV 87 (187)
Q Consensus 49 ~~~~i~~li~aGm--------~v~RiN~sH-g~~e~~~~~i~~ir~a~ 87 (187)
..+..+.|.+.|+ +.+||+++. -+.++..+.++.++++.
T Consensus 348 ~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 348 YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 4567778888887 678999984 47888888888887753
No 311
>1am2_A MXE GYRA intein; protein splicing; 2.20A {Mycobacterium xenopi} SCOP: b.86.1.2
Probab=22.40 E-value=73 Score=24.33 Aligned_cols=16 Identities=19% Similarity=0.488 Sum_probs=13.4
Q ss_pred hhhcCCCCCEEEEeCC
Q psy254 156 ITKVVKPGSRIFVDDG 171 (187)
Q Consensus 156 l~~~v~~Gd~IlidDG 171 (187)
.+..|++||.|++.++
T Consensus 94 ~a~eLk~GD~v~~~~~ 109 (199)
T 1am2_A 94 LIDEIKPGDYAVIQRS 109 (199)
T ss_dssp EGGGCCTTCEEEEEGG
T ss_pred EhhHCCCCCEEEECCc
Confidence 4688999999999763
No 312
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.35 E-value=2.5e+02 Score=23.12 Aligned_cols=17 Identities=24% Similarity=0.741 Sum_probs=14.5
Q ss_pred HHHHhcCcEEEEecCCC
Q psy254 55 KIIETGMNIARLNFSHG 71 (187)
Q Consensus 55 ~li~aGm~v~RiN~sHg 71 (187)
...++|.|..=||++||
T Consensus 160 ~a~~aGfDgVEih~a~G 176 (349)
T 3hgj_A 160 RALRAGFQVIELHMAHG 176 (349)
T ss_dssp HHHHTTCCEEEEEECTT
T ss_pred HHHHcCCCEEEECCccc
Confidence 34568999999999995
No 313
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=22.33 E-value=53 Score=28.54 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcCcEEEEecCCC
Q psy254 50 VDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg 71 (187)
.+.|+-|-+.|++++|+.+|..
T Consensus 60 ~eDi~lm~~~G~~~~R~si~W~ 81 (431)
T 1ug6_A 60 EEDIALMQSLGVRAYRFSVAWP 81 (431)
T ss_dssp HHHHHHHHHHTCCEEEEECCHH
T ss_pred HHHHHHHHHcCCCEEEcccCHH
Confidence 5789999999999999999864
No 314
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=22.28 E-value=64 Score=26.44 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=30.8
Q ss_pred HHHHHHHH-HhcCcE---EEEecCCCCHHHHHHHHHHHHHHHHH
Q psy254 50 VDMLEKII-ETGMNI---ARLNFSHGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 50 ~~~i~~li-~aGm~v---~RiN~sHg~~e~~~~~i~~ir~a~~~ 89 (187)
.+.+..++ +.|+-+ +||++++-+.++..+.++.++++.+.
T Consensus 367 ~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 367 PQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp HHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEeccCcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 35567766 678765 69999976888888999988887654
No 315
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=22.23 E-value=1.5e+02 Score=24.57 Aligned_cols=39 Identities=3% Similarity=0.111 Sum_probs=31.6
Q ss_pred HHHHHHHHhcC------cEEEEecC-CCCHHHHHHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGM------NIARLNFS-HGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 51 ~~i~~li~aGm------~v~RiN~s-Hg~~e~~~~~i~~ir~a~~~ 89 (187)
+..+.|.+.|+ +.+||+++ ..+.++..+.++.++++.++
T Consensus 401 ~~~~~l~~~Gv~v~~~g~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 401 EAGMALWKAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp HHHHHHHHHTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 57777888886 67899976 67888999999999887654
No 316
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=22.14 E-value=77 Score=28.94 Aligned_cols=35 Identities=23% Similarity=0.442 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCcEEEEecCCC-CHHHHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFSHG-SYEYHGQTIKNIRQ 85 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg-~~e~~~~~i~~ir~ 85 (187)
+.++.+++.|+|.|||..++. .++.|+++.+.+++
T Consensus 426 ~~~~~Wl~~GvDGfRlDaa~~i~~~f~~~~~~~v~~ 461 (696)
T 4aee_A 426 DITKFWIDKGIDGFRIDVAMGIHYSWMKQYYEYIKN 461 (696)
T ss_dssp HHHHHHHTTTCCEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEechhhCCHHHHHHHHHHHHh
Confidence 456666788999999999864 56666666666654
No 317
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=22.10 E-value=1.2e+02 Score=25.01 Aligned_cols=48 Identities=10% Similarity=0.136 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCcEEEEecC---CCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCC
Q psy254 51 DMLEKIIETGMNIARLNFS---HGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTK 107 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~s---Hg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~ 107 (187)
+.++-|-..|+|.+|+-.- .+.......+++.+++| ++.| +.+++|+-
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~a-k~~G--------l~v~ld~h 81 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRV-KAAG--------MSLYLDLH 81 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHH-HHTT--------CEEEEEEC
T ss_pred hHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHH-HHCC--------CEEEEEec
Confidence 3567777899999999642 12223344555555554 4445 78888864
No 318
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.10 E-value=1.1e+02 Score=26.12 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=22.6
Q ss_pred HHHHHHHHhcCcEEEEecCCC-CHH-HHHHHHHHHHH
Q psy254 51 DMLEKIIETGMNIARLNFSHG-SYE-YHGQTIKNIRQ 85 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg-~~e-~~~~~i~~ir~ 85 (187)
+.++.+++.|+|.||+..++. ..+ .|+++.+.+++
T Consensus 186 ~~~~~w~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~ 222 (475)
T 2z1k_A 186 AVAEHWIRFGVDGWRLDVPNEIPDPTFWREFRQRVKG 222 (475)
T ss_dssp HHHHHHHHHTCCEEEESSGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEeecccccCCHHHHHHHHHHHHhh
Confidence 455566688999999988854 344 55554444443
No 319
>3tj8_A Urease accessory protein UREE; metal binding protein; 1.59A {Helicobacter pylori} PDB: 3tj9_A 3tja_A 3l9z_A 3la0_A 3nxz_A 3ny0_A
Probab=22.09 E-value=1.7e+02 Score=22.01 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=18.0
Q ss_pred EEeeCcchhhh-cCCCCCEEEEeCCeE
Q psy254 148 DLYVDYTNITK-VVKPGSRIFVDDGLI 173 (187)
Q Consensus 148 ~i~v~~~~l~~-~v~~Gd~IlidDG~i 173 (187)
.+.+..+.=.. .|+.||.++.|||.+
T Consensus 44 ev~l~L~r~~~~~L~dGDvL~~ddg~~ 70 (170)
T 3tj8_A 44 DIAIRLKDAPKLGLSQGDILFKEEKEI 70 (170)
T ss_dssp EEEEECSSCCTTCCCTTEEEEEETTEE
T ss_pred EEEEECCCCCcCCcCCCCEEEECCCcE
Confidence 35555443222 589999999999964
No 320
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.99 E-value=1.4e+02 Score=23.56 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCCceEEEec-CCC-CCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHH
Q psy254 34 VRLTGIICTI-GPA-SVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIR 84 (187)
Q Consensus 34 ~r~TkIi~Ti-GPa-s~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir 84 (187)
+++.+||+=+ +.. ..-....+.|++.|++++++.|..- ...+.|+.+|
T Consensus 10 ~~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~---~a~~~I~~l~ 59 (217)
T 3lab_A 10 ANTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTE---AGLAAISAIK 59 (217)
T ss_dssp TTSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHH
T ss_pred HhhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCc---cHHHHHHHHH
Confidence 3456777776 333 3456788899999999999988853 3344554444
No 321
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=21.96 E-value=2.6e+02 Score=21.02 Aligned_cols=50 Identities=10% Similarity=0.193 Sum_probs=41.4
Q ss_pred EEecCCCCCCHHHHHHHHHhcCc----------------EEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 40 ICTIGPASVAVDMLEKIIETGMN----------------IARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 40 i~TiGPas~~~~~i~~li~aGm~----------------v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
||++ |+.+..+.+++|+++=-+ ++.+.++--++++..+.|..+-..+.++
T Consensus 80 V~~l-P~~~~~~l~~~LLE~N~~~t~~arFaI~~n~V~~v~~r~ls~Ld~~E~~~aIt~V~~lAD~~ 145 (163)
T 2plg_A 80 VLPL-PVADELALYRKLLTLNWLTTFEAHFAIAEEQVQVVASRTLGGITAGEISRLITIVATLADDY 145 (163)
T ss_dssp EEES-CCTTHHHHHHHHHHHTTTTTTTCEEEEETTEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eccC-chhhHHHHHHHHHHhccccccceEEEEECCEEEEEEEEEcccCCHHHHHHHHHHHHHHHHHH
Confidence 4444 888999999999998744 6788899999999999999998777665
No 322
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.93 E-value=1.3e+02 Score=24.22 Aligned_cols=31 Identities=13% Similarity=0.518 Sum_probs=23.1
Q ss_pred eEEEec--CCC--CCCHHHHHHHHHhcCcEEEEec
Q psy254 38 GIICTI--GPA--SVAVDMLEKIIETGMNIARLNF 68 (187)
Q Consensus 38 kIi~Ti--GPa--s~~~~~i~~li~aGm~v~RiN~ 68 (187)
-+|.-| |-. ..+.+.++.|.++|+|+.=|.+
T Consensus 19 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgi 53 (267)
T 3vnd_A 19 AFVPFVTIGDPSPELSLKIIQTLVDNGADALELGF 53 (267)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 344444 544 3467889999999999999993
No 323
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=21.86 E-value=1.8e+02 Score=23.51 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=44.0
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEe
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRt 113 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-+ -+.++ ||
T Consensus 81 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiil-Yn~P~---~t 150 (301)
T 1xky_A 81 RVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP------LPVML-YNVPG---RS 150 (301)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS------SCEEE-EECHH---HH
T ss_pred CceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC------CCEEE-EeCcc---cc
Confidence 567888777543 23466677888999988775554333344677778888777655 45443 35554 55
Q ss_pred e
Q psy254 114 G 114 (187)
Q Consensus 114 G 114 (187)
|
T Consensus 151 g 151 (301)
T 1xky_A 151 I 151 (301)
T ss_dssp S
T ss_pred C
Confidence 5
No 324
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=21.75 E-value=2.9e+02 Score=21.54 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=35.2
Q ss_pred EEEecCC-CCCCHHHHHHHHHhcC-------cEEEEecC-CCCHHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGP-ASVAVDMLEKIIETGM-------NIARLNFS-HGSYEYHGQTIKNIRQAVEN 89 (187)
Q Consensus 39 Ii~TiGP-as~~~~~i~~li~aGm-------~v~RiN~s-Hg~~e~~~~~i~~ir~a~~~ 89 (187)
+.+.+.+ .....+..+.|.+.|+ +.+||.+. .-+.++..+.++.++++.++
T Consensus 286 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 286 VILRTDNLKVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp EEEECTTSSSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccccCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 4455632 2234567778888885 45798884 45899999999999887654
No 325
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.72 E-value=1.7e+02 Score=23.70 Aligned_cols=56 Identities=9% Similarity=0.043 Sum_probs=37.8
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+
T Consensus 69 rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 69 RVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 466777776643 23466677888999988876554433345677778888777665
No 326
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=21.72 E-value=1.4e+02 Score=24.95 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=37.7
Q ss_pred ceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 37 TGIICTIGPASVAV----DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 37 TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
.....|+|- .++ +..+++.++|.+.+.|++.. ..+.-.++++.||++. + + +.+++|..|
T Consensus 137 v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~---g-d------~~l~vD~n~ 199 (384)
T 2pgw_A 137 VGYFYFLQG--ETAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEI---G-D------ARLRLDANE 199 (384)
T ss_dssp EEBCEECCC--SSHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTS---T-T------CEEEEECTT
T ss_pred eEEEEECCC--CCHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHc---C-C------cEEEEecCC
Confidence 344466643 233 44567889999999999875 5566666666666552 2 1 356778653
No 327
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=21.61 E-value=1.4e+02 Score=20.17 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=45.3
Q ss_pred ceeEEEeeCCCCeeEeeecCCCCcccEEeeeCCEEEEeeCCCcccCCCcCEEeeCcchhhhcCCCCCEEEEeCCeEEEEE
Q psy254 98 HALAIALDTKGPEIRTGLLQGGGSAEVELVKGQTIRLTTDAAFAEKGSATDLYVDYTNITKVVKPGSRIFVDDGLISLVV 177 (187)
Q Consensus 98 ~~v~I~~Dl~GPkIRtG~~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IlidDG~i~l~V 177 (187)
.|+.+-+.|.--++..+.+ ..|+.|+.+.|.... +++=.++++-.-++. |. +-.-+|++.++|
T Consensus 19 v~V~l~~~LG~~~itl~el-------l~L~~GdVI~Ld~~~-----~~~v~i~vng~~i~~----Ge-~g~~~~~~aVrI 81 (96)
T 3uep_A 19 LPVQVSFEVGRQILDWHTL-------TSLEPGSLIDLTTPV-----DGEVRLLANGRLLGH----GR-LVEIQGRLGVRI 81 (96)
T ss_dssp CEEEEEEEESCCEEEHHHH-------HHCCTTCEEEEEEES-----SCEEEEEETTEEEEE----EE-EEEETTEEEEEE
T ss_pred ceEEEEEEEeceeeeHHHH-------hcCCCCCEEEeCCCC-----CCcEEEEECCEEEEE----EE-EEEECCEEEEEE
Confidence 6788888888888877766 458899999887531 223346776544443 33 334567999999
Q ss_pred EEEe
Q psy254 178 KSIV 181 (187)
Q Consensus 178 ~~v~ 181 (187)
+++-
T Consensus 82 ~~i~ 85 (96)
T 3uep_A 82 ERLT 85 (96)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9873
No 328
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=21.60 E-value=1.5e+02 Score=23.49 Aligned_cols=45 Identities=16% Similarity=0.275 Sum_probs=31.5
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC----------cEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM----------NIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm----------~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
+...+... ...+..+.|.+.|+ +.+||+++ +.++..+.++.++++
T Consensus 309 ~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l~~~l~~~ 363 (365)
T 3get_A 309 ITYFFDEK-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG--TSYENEKFFTEFDKI 363 (365)
T ss_dssp EEEECSSS-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC--CHHHHHHHHHHHHHH
T ss_pred EEEECCCC-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence 45555222 44566677777775 56799987 888888888888765
No 329
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=21.55 E-value=2.7e+02 Score=23.61 Aligned_cols=48 Identities=15% Similarity=0.253 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++.++|-+.+.|.... +.+.-.++++.||++ .+ ..+.|++|..|
T Consensus 204 ~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a---~G------~d~~l~vDan~ 251 (441)
T 2hxt_A 204 RLAKEAVADGFRTIKLKVGA-NVQDDIRRCRLARAA---IG------PDIAMAVDANQ 251 (441)
T ss_dssp HHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH---HC------SSSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEccCC-CHHHHHHHHHHHHHh---cC------CCCeEEEECCC
Confidence 44567889999999998864 456666667666665 35 34678888754
No 330
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=21.54 E-value=2.2e+02 Score=23.26 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=40.9
Q ss_pred CceEEEecCCCC-CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS-VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas-~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+..+|+-+|.++ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 81 rvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiilY 143 (316)
T 3e96_A 81 RALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD------FPSLVY 143 (316)
T ss_dssp SSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT------SCEEEE
T ss_pred CCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC------CCEEEE
Confidence 568888888421 12355567888999988875443333345677777788777766 676665
No 331
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=21.47 E-value=1.2e+02 Score=24.25 Aligned_cols=38 Identities=11% Similarity=0.242 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHh-cC-------------cEEEEecCCCCHHHHHHHHHHHHHH
Q psy254 48 VAVDMLEKIIET-GM-------------NIARLNFSHGSYEYHGQTIKNIRQA 86 (187)
Q Consensus 48 ~~~~~i~~li~a-Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~a 86 (187)
...+..+.|.+. |+ +.+||++++ +.++..+.++.++++
T Consensus 338 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 338 SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNA 389 (391)
T ss_dssp CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 445666778887 75 569999995 777788888877765
No 332
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=21.47 E-value=1.7e+02 Score=23.75 Aligned_cols=62 Identities=6% Similarity=-0.016 Sum_probs=42.5
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 84 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPiilY 147 (304)
T 3l21_A 84 RARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATE------LPMLLY 147 (304)
T ss_dssp TSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCS------SCEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC------CCEEEE
Confidence 568888886533 34567778888999988886544333345677788888777665 566554
No 333
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=21.46 E-value=1.5e+02 Score=23.75 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=34.7
Q ss_pred CceEEEecCC-CCCC-HHHHHHHHHhcCc---EEEEecC----------CCCHHHHHHHHHHHHHHH
Q psy254 36 LTGIICTIGP-ASVA-VDMLEKIIETGMN---IARLNFS----------HGSYEYHGQTIKNIRQAV 87 (187)
Q Consensus 36 ~TkIi~TiGP-as~~-~~~i~~li~aGm~---v~RiN~s----------Hg~~e~~~~~i~~ir~a~ 87 (187)
...+++.|+- ..++ .+..+.+.++|.+ .+=|||+ .++++...++++.+|++.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~ 159 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY 159 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc
Confidence 3568888853 2222 3455667788999 9999998 126666677777777653
No 334
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=21.43 E-value=99 Score=24.91 Aligned_cols=41 Identities=12% Similarity=0.367 Sum_probs=31.3
Q ss_pred CHHHHHHHH-HhcC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy254 49 AVDMLEKII-ETGM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 49 ~~~~i~~li-~aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~ 90 (187)
..+..+.|. +.|+ +.+||++++ +.++..+.++.++++.++.
T Consensus 332 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 332 SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 345666777 6674 357999998 8888999999998887654
No 335
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.24 E-value=2.1e+02 Score=23.04 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=41.1
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEE
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIA 103 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~ 103 (187)
+..+|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+-++
T Consensus 76 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~------lPiilY 139 (297)
T 3flu_A 76 RVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS------IPMIIY 139 (297)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC------SCEEEE
T ss_pred CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC------CCEEEE
Confidence 467888776433 34567778889999988775543322234677888888877765 566554
No 336
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=21.07 E-value=95 Score=19.21 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=18.3
Q ss_pred CEEeeCcchhhh--cCCCCCEEEE--eCCeEEEE
Q psy254 147 TDLYVDYTNITK--VVKPGSRIFV--DDGLISLV 176 (187)
Q Consensus 147 ~~i~v~~~~l~~--~v~~Gd~Ili--dDG~i~l~ 176 (187)
..|.++ .++-+ .+++||.|.+ ++|.|.|+
T Consensus 22 GqItIP-keiR~~Lgi~~Gd~l~i~~~~~~IiL~ 54 (59)
T 1yfb_A 22 GRVVIP-IELRRTLGIAEKDALEIYVDDEKIILK 54 (59)
T ss_dssp CEEECC-HHHHHHTTCCTTCEEEEEEETTEEEEE
T ss_pred CEEEeC-HHHHHHcCCCCCCEEEEEEECCEEEEE
Confidence 345554 34444 6779998665 67877665
No 337
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=21.05 E-value=3.3e+02 Score=22.01 Aligned_cols=54 Identities=15% Similarity=0.014 Sum_probs=34.7
Q ss_pred ceEEEecCCCCCC-----HHHHHH---HHHhcCcEEEEecCCC---------CHHHHHHHHHHHHHHHHHh
Q psy254 37 TGIICTIGPASVA-----VDMLEK---IIETGMNIARLNFSHG---------SYEYHGQTIKNIRQAVENY 90 (187)
Q Consensus 37 TkIi~TiGPas~~-----~~~i~~---li~aGm~v~RiN~sHg---------~~e~~~~~i~~ir~a~~~~ 90 (187)
..+++++++.... .+.+.+ ++..|.|.+=|||+.- ..+...++++.||++..++
T Consensus 134 ~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~ 204 (336)
T 1f76_A 134 GVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDL 204 (336)
T ss_dssp SEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhh
Confidence 4799999875421 333333 3346899999999632 2344567888888876443
No 338
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=21.00 E-value=2.6e+02 Score=22.34 Aligned_cols=42 Identities=10% Similarity=0.007 Sum_probs=30.8
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHH
Q psy254 37 TGIICTIGPASVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIR 84 (187)
Q Consensus 37 TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir 84 (187)
.||+..+ ++++.+++.+++|++..++. ..++++.++.++.++
T Consensus 183 ~~i~vev----~tlee~~~A~~aGaD~I~ld--~~~~~~l~~~v~~l~ 224 (273)
T 2b7n_A 183 AKIEIEC----ESFEEAKNAMNAGADIVMCD--NLSVLETKEIAAYRD 224 (273)
T ss_dssp CCEEEEE----SSHHHHHHHHHHTCSEEEEE--TCCHHHHHHHHHHHH
T ss_pred ceEEEEc----CCHHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHhh
Confidence 4677765 67788999999999999974 467766665555443
No 339
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=20.98 E-value=2.3e+02 Score=24.41 Aligned_cols=48 Identities=8% Similarity=0.162 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 51 DMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 51 ~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+++++.|-+.+.++... +.++-.++++.+|+ .+| ..+.|++|--+
T Consensus 207 ~~a~~~~~~Gf~~~KlKvG~-~~~~d~~~v~avR~---a~G------~~~~l~vDaN~ 254 (441)
T 4a35_A 207 QLCAQALKDGWTRFKVKVGA-DLQDDMRRCQIIRD---MIG------PEKTLMMDANQ 254 (441)
T ss_dssp HHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHH---HHC------TTSEEEEECTT
T ss_pred HHHHHHHHCCCCEEEEcCCC-CHHHHHHHHHHHHH---HhC------CCCeEEEECCC
Confidence 34556788999999999865 45544555555554 455 34688888764
No 340
>2ln7_A LPXTG-SITE transpeptidase family protein; sortase, sortase family D, enzyme, protein binding; NMR {Bacillus anthracis}
Probab=20.89 E-value=95 Score=22.53 Aligned_cols=24 Identities=8% Similarity=0.205 Sum_probs=17.8
Q ss_pred hhcCCCCCEEEEe--CCeEEEEEEEE
Q psy254 157 TKVVKPGSRIFVD--DGLISLVVKSI 180 (187)
Q Consensus 157 ~~~v~~Gd~Ilid--DG~i~l~V~~v 180 (187)
+..+++||.|++. ++....+|.++
T Consensus 73 L~~l~~GD~i~v~~~~~~~~Y~V~~~ 98 (147)
T 2ln7_A 73 LGQLKEKDTLVLEYDNKTYTYEIQKI 98 (147)
T ss_dssp HHHSSTTCEEEEEETTEEEEEEEEEE
T ss_pred hhcccCCCEEEEEECCcEEEEEEEeE
Confidence 4689999999986 55666666654
No 341
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=20.73 E-value=3.3e+02 Score=21.99 Aligned_cols=62 Identities=10% Similarity=0.175 Sum_probs=40.1
Q ss_pred CCceEEEecCCC-CCCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCC
Q psy254 35 RLTGIICTIGPA-SVAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGP 109 (187)
Q Consensus 35 r~TkIi~TiGPa-s~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GP 109 (187)
.+...-+|+|.. ..+++.+.++++.|-+.+.+.... +.++-.++++.||+ -+ +.+++|--|.
T Consensus 97 ~~v~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~-~~~~d~~~v~avr~----~~--------~~l~vDaN~~ 159 (330)
T 3caw_A 97 EKIKNNYLLSHFQDLKPGFLDGLKNEGYNTVKVKMGR-DLQKEADMLTHIAA----SG--------MRMRLDFNAL 159 (330)
T ss_dssp CCCCBCEEECTTSCCCTTHHHHHHHHTCCEEEEECSS-CHHHHHHHHHHHHH----TT--------CEEEEECTTC
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHcCCcEEEEecCC-CHHHHHHHHHHHhC----CC--------CeEEEECCCC
Confidence 344556788622 022333338899999999998865 55655666777766 12 5888897654
No 342
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=20.70 E-value=1.8e+02 Score=23.20 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=34.5
Q ss_pred EEecCCCC-CCHHHHHHHHHhcCcEEEEecCCCC-HHHHHHHHHHHHH
Q psy254 40 ICTIGPAS-VAVDMLEKIIETGMNIARLNFSHGS-YEYHGQTIKNIRQ 85 (187)
Q Consensus 40 i~TiGPas-~~~~~i~~li~aGm~v~RiN~sHg~-~e~~~~~i~~ir~ 85 (187)
+.-+=|.- .+.+.++.+.++|.|.+-+-.|.|. .+...++++.||+
T Consensus 15 ~~~~DPdk~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~ 62 (235)
T 3w01_A 15 IFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR 62 (235)
T ss_dssp EEEECTTSCCCHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT
T ss_pred EEeECCCCcCCHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC
Confidence 33344544 3788999999999999999999976 5556677777665
No 343
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=20.59 E-value=3.9e+02 Score=23.19 Aligned_cols=24 Identities=13% Similarity=0.354 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHhcCcEEEEecCCC
Q psy254 48 VAVDMLEKIIETGMNIARLNFSHG 71 (187)
Q Consensus 48 ~~~~~i~~li~aGm~v~RiN~sHg 71 (187)
.+.+..+.|+++|+++..+.+.-|
T Consensus 293 ~t~~~a~~l~~aGad~I~Vg~~~g 316 (503)
T 1me8_A 293 VDGEGFRYLADAGADFIKIGIGGG 316 (503)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCS
T ss_pred cCHHHHHHHHHhCCCeEEecccCC
Confidence 668899999999999999965443
No 344
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=20.56 E-value=1.2e+02 Score=24.67 Aligned_cols=42 Identities=10% Similarity=0.288 Sum_probs=32.0
Q ss_pred CHHHHHHHHH-hcC-------------cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 49 AVDMLEKIIE-TGM-------------NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 49 ~~~~i~~li~-aGm-------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
..+..+.|.+ .|+ +.+||++++ +.++..+.++.++++.++.+
T Consensus 344 ~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 344 SLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence 3456666765 464 468999998 88889999999998887765
No 345
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=20.54 E-value=1.8e+02 Score=23.67 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=43.6
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCCCeeEe
Q psy254 36 LTGIICTIGPAS--VAVDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKGPEIRT 113 (187)
Q Consensus 36 ~TkIi~TiGPas--~~~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~GPkIRt 113 (187)
+.++|+-+|-.+ +..+..+..-++|++.+-+-.-+-..-....+++..++.++..+ .|+- +-+.++ ||
T Consensus 81 rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~------lPii-lYn~P~---~t 150 (306)
T 1o5k_A 81 KIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD------LGIV-VYNVPG---RT 150 (306)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS------SCEE-EEECHH---HH
T ss_pred CCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC------CCEE-EEeCcc---cc
Confidence 567888777644 23466677788999988776554333344677777787776654 4544 335554 55
Q ss_pred e
Q psy254 114 G 114 (187)
Q Consensus 114 G 114 (187)
|
T Consensus 151 g 151 (306)
T 1o5k_A 151 G 151 (306)
T ss_dssp S
T ss_pred C
Confidence 5
No 346
>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus}
Probab=20.43 E-value=45 Score=26.06 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=18.2
Q ss_pred eeCcchhhhcCCCCCEEEEeC
Q psy254 150 YVDYTNITKVVKPGSRIFVDD 170 (187)
Q Consensus 150 ~v~~~~l~~~v~~Gd~IlidD 170 (187)
..+|..+.+.+++||.||+..
T Consensus 30 ~~~~~~~~~~l~~GDlif~~~ 50 (214)
T 3kw0_A 30 IDKYENLINVLKTGDIFLCSG 50 (214)
T ss_dssp EECHHHHTTTCCTTCEEEEEE
T ss_pred ccCHHHHHhhCCCCCEEEEeC
Confidence 357899999999999999963
No 347
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=20.40 E-value=2.2e+02 Score=22.42 Aligned_cols=35 Identities=11% Similarity=0.393 Sum_probs=24.1
Q ss_pred eEEEec--CCC--CCCHHHHHHHHHhcCcEEEEecCCCC
Q psy254 38 GIICTI--GPA--SVAVDMLEKIIETGMNIARLNFSHGS 72 (187)
Q Consensus 38 kIi~Ti--GPa--s~~~~~i~~li~aGm~v~RiN~sHg~ 72 (187)
-++..| |-. ....+.++.|.++|+|..=+++...+
T Consensus 18 ~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sd 56 (268)
T 1qop_A 18 AFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSD 56 (268)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSC
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
Confidence 455555 322 23356788899999999999995543
No 348
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=20.39 E-value=3.3e+02 Score=21.64 Aligned_cols=54 Identities=4% Similarity=-0.034 Sum_probs=36.1
Q ss_pred eEEEecCCCCCCHHHHHHHHHh-cC-----------cEEEEec-CC-CCHHHHHHHHHHHHHHHHHhC
Q psy254 38 GIICTIGPASVAVDMLEKIIET-GM-----------NIARLNF-SH-GSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 38 kIi~TiGPas~~~~~i~~li~a-Gm-----------~v~RiN~-sH-g~~e~~~~~i~~ir~a~~~~~ 91 (187)
-+...+.+.....+..+.|.+. |+ +.+||++ .+ -+.++..+.++.++++.+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 317 VTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 3445552122334555667765 75 4689998 33 378889999999999887765
No 349
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=20.38 E-value=3.4e+02 Score=21.82 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.3
Q ss_pred EEecCCCCCCHHHHHHHHHhc--CcEEEEecCCCCHHHHHHH
Q psy254 40 ICTIGPASVAVDMLEKIIETG--MNIARLNFSHGSYEYHGQT 79 (187)
Q Consensus 40 i~TiGPas~~~~~i~~li~aG--m~v~RiN~sHg~~e~~~~~ 79 (187)
+.|-|.. ++.++.|.++| .+.+-+.+-..+.+.+.++
T Consensus 175 l~TNG~~---~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i 213 (342)
T 2yx0_A 175 IVTNGTI---PERLEEMIKEDKLPTQLYVSITAPDIETYNSV 213 (342)
T ss_dssp EEECSCC---HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHH
T ss_pred EEcCCCc---HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHH
Confidence 4455553 78899999988 8888888877777765543
No 350
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=20.35 E-value=1.3e+02 Score=25.59 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 50 VDMLEKIIETGMNIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 50 ~~~i~~li~aGm~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
.+.++-.++.|+|.||+...|.-++.+ ..++.+|++.+++.
T Consensus 125 ~~~~~~Wl~~gvDGfRlD~v~~~~~~~-~~~~~~~~~~~~~~ 165 (424)
T 2dh2_A 125 KDALEFWLQAGVDGFQVRDIENLKDAS-SFLAEWQNITKGFS 165 (424)
T ss_dssp HHHHHHHHHHTCCEEEECCGGGSTTHH-HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEeccccCCccH-HHHHHHHHHHHHhC
Confidence 356666778999999998776543321 34555666656554
No 351
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.30 E-value=3.6e+02 Score=22.12 Aligned_cols=31 Identities=13% Similarity=0.138 Sum_probs=23.2
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhcCcEEEEecC
Q psy254 35 RLTGIICTIGPASVAVDMLEKIIETGMNIARLNFS 69 (187)
Q Consensus 35 r~TkIi~TiGPas~~~~~i~~li~aGm~v~RiN~s 69 (187)
+.+++.+ +.|+.. .++..+++|++++|+-++
T Consensus 88 ~~~~i~~-l~~~~~---~i~~a~~~g~~~v~i~~~ 118 (337)
T 3ble_A 88 ERIEILG-FVDGNK---TVDWIKDSGAKVLNLLTK 118 (337)
T ss_dssp GGEEEEE-ESSTTH---HHHHHHHHTCCEEEEEEE
T ss_pred CCCeEEE-Eccchh---hHHHHHHCCCCEEEEEEe
Confidence 3455554 667653 799999999999999764
No 352
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=20.16 E-value=1.2e+02 Score=24.82 Aligned_cols=30 Identities=10% Similarity=0.042 Sum_probs=25.0
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 62 NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 62 ~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.+||++++-+.++..+.++.++++.++..
T Consensus 387 ~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 387 RNLRLAPTRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 578999997799999999999988766543
No 353
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=20.12 E-value=2.3e+02 Score=22.81 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=34.1
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC-------cEEEEecC-CCCHHHHHHHHHHHHHHHH
Q psy254 39 IICTIGPASVAVDMLEKIIETGM-------NIARLNFS-HGSYEYHGQTIKNIRQAVE 88 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm-------~v~RiN~s-Hg~~e~~~~~i~~ir~a~~ 88 (187)
+...+.+.....+..+.|.+.|+ +.+||+++ ..+.++..+.++.++++.+
T Consensus 338 ~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 338 IGIQFREEVSNREVATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp EEEEECTTSCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECChHHHHHHHHHHHHCCCEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 33445332234567777888885 46899976 4678889999999887754
No 354
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=20.10 E-value=2.7e+02 Score=23.27 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=38.0
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhcCcEEEEecCC-C-CH-HHHHHHHHHHHHHHHHhCCCCCCcceeEEEeeCCC
Q psy254 36 LTGIICTIGPASVAV----DMLEKIIETGMNIARLNFSH-G-SY-EYHGQTIKNIRQAVENYSKRIGMPHALAIALDTKG 108 (187)
Q Consensus 36 ~TkIi~TiGPas~~~----~~i~~li~aGm~v~RiN~sH-g-~~-e~~~~~i~~ir~a~~~~~~~~~~~~~v~I~~Dl~G 108 (187)
+..+.++++.. .++ +..+++.++|-+.+.++.|- | +. +...++++.||++ .+ ..+.|++|..|
T Consensus 133 ~vp~~~~~~~~-~~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a---~G------~d~~l~vDan~ 202 (401)
T 2hzg_A 133 GKRPYASLLFG-DTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREG---LG------PDGDLMVDVGQ 202 (401)
T ss_dssp CBEEEEEEECC-SSHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHH---HC------SSSEEEEECTT
T ss_pred ceEeeEEcCCC-CCHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHH---hC------CCCeEEEECCC
Confidence 34555555432 233 34566788999999998321 2 33 4455666666654 45 34678889864
No 355
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.03 E-value=1.3e+02 Score=24.68 Aligned_cols=53 Identities=25% Similarity=0.227 Sum_probs=36.8
Q ss_pred EEEecCCCCCCHHHHHHHHHhcC---------------cEEEEecCCCCHHHHHHHHHHHHHHHHHhC
Q psy254 39 IICTIGPASVAVDMLEKIIETGM---------------NIARLNFSHGSYEYHGQTIKNIRQAVENYS 91 (187)
Q Consensus 39 Ii~TiGPas~~~~~i~~li~aGm---------------~v~RiN~sHg~~e~~~~~i~~ir~a~~~~~ 91 (187)
+.+.+.+.....+..+.|.+.|+ +.+||++++-+.++..+.++.++++.++..
T Consensus 352 ~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 352 IWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYG 419 (425)
T ss_dssp EEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34445322233456677777663 468999998788999999999988776654
Done!