Query psy2547
Match_columns 1807
No_of_seqs 575 out of 2990
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:01:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aqs_A Laminin subunit beta-1; 100.0 2E-105 7E-110 1029.2 33.7 514 26-546 4-525 (525)
2 2y38_A Laminin subunit alpha-5 100.0 9.8E-90 3.3E-94 823.4 24.0 350 37-404 8-395 (403)
3 4aqt_A Laminin subunit gamma-1 100.0 5.2E-86 1.8E-90 791.9 23.6 349 31-405 5-368 (375)
4 3zyj_B Netrin-G1; cell adhesio 100.0 5.1E-81 1.7E-85 748.3 18.9 356 20-436 27-420 (426)
5 3tbd_A Netrin-G2, laminet-2; l 100.0 3.1E-72 1.1E-76 650.6 15.9 275 31-331 13-315 (338)
6 1klo_A Laminin; glycoprotein; 99.9 6.8E-28 2.3E-32 259.1 6.1 154 917-1078 1-162 (162)
7 4aqs_A Laminin subunit beta-1; 99.9 1.2E-27 4.1E-32 307.3 8.8 237 866-1112 253-525 (525)
8 1klo_A Laminin; glycoprotein; 99.9 1.2E-26 4.3E-31 249.2 8.1 157 341-513 1-162 (162)
9 2gy5_A Angiopoietin-1 receptor 99.7 6.7E-18 2.3E-22 208.6 6.9 175 941-1156 184-379 (423)
10 2gy5_A Angiopoietin-1 receptor 99.6 1.5E-16 5.2E-21 196.5 5.6 130 1011-1161 188-321 (423)
11 2y38_A Laminin subunit alpha-5 99.6 2.1E-16 7.3E-21 189.9 6.6 106 337-452 262-382 (403)
12 4aqt_A Laminin subunit gamma-1 99.5 1.6E-15 5.3E-20 182.3 3.1 112 336-464 250-369 (375)
13 3zyj_B Netrin-G1; cell adhesio 99.5 3.8E-15 1.3E-19 179.3 3.0 118 335-487 291-419 (426)
14 3k6s_B Integrin beta-2; cell r 99.4 3.8E-14 1.3E-18 182.4 5.8 169 898-1114 407-594 (687)
15 2ygq_A WIF-1, WNT inhibitory f 99.4 4.9E-13 1.7E-17 159.8 8.1 153 931-1165 159-313 (324)
16 3k6s_B Integrin beta-2; cell r 99.3 1.1E-12 3.6E-17 169.1 7.1 130 789-959 445-594 (687)
17 2ygq_A WIF-1, WNT inhibitory f 99.3 1.5E-12 5.1E-17 155.6 7.8 159 822-1068 154-314 (324)
18 3fcs_B Integrin beta-3; beta p 99.3 2.3E-12 7.9E-17 166.6 9.2 155 942-1159 458-627 (690)
19 1c1g_A Tropomyosin; contractIl 99.3 6.9E-08 2.4E-12 113.0 46.7 59 1738-1796 224-282 (284)
20 1c1g_A Tropomyosin; contractIl 99.3 1E-07 3.4E-12 111.6 46.8 29 1760-1788 253-281 (284)
21 1i84_S Smooth muscle myosin he 99.2 1.3E-11 4.4E-16 172.2 12.6 33 197-233 105-138 (1184)
22 1i84_S Smooth muscle myosin he 99.2 9.1E-11 3.1E-15 163.7 20.6 22 1771-1792 1143-1164(1184)
23 3fcs_B Integrin beta-3; beta p 99.2 8.8E-12 3E-16 161.2 9.5 155 789-1010 457-627 (690)
24 2vj2_A Jagged-1; signalling, p 99.1 1.5E-11 5.1E-16 133.3 3.4 149 940-1160 15-169 (169)
25 2vj2_A Jagged-1; signalling, p 99.1 2.9E-11 9.9E-16 131.1 2.7 148 788-1010 15-168 (169)
26 4d90_A EGF-like repeat and dis 98.5 1.7E-07 5.7E-12 98.7 7.5 53 1046-1112 79-133 (143)
27 2vj3_A Neurogenic locus notch 98.4 9.5E-08 3.2E-12 99.4 4.5 98 832-957 20-119 (135)
28 4fbr_A Lectin, myxobacterial h 98.4 2.2E-10 7.6E-15 129.8 -16.9 201 832-1108 45-265 (267)
29 2vj3_A Neurogenic locus notch 98.4 1.8E-07 6.3E-12 97.2 6.2 101 1028-1160 13-119 (135)
30 4d90_A EGF-like repeat and dis 98.4 4.1E-07 1.4E-11 95.7 7.8 109 1025-1160 3-133 (143)
31 3na7_A HP0958; flagellar bioge 98.3 0.0001 3.6E-09 84.9 24.7 51 1633-1683 33-83 (256)
32 3vkg_A Dynein heavy chain, cyt 98.2 0.0001 3.4E-09 108.9 29.3 90 1660-1749 2014-2103(3245)
33 1z1y_A Ookinete surface protei 98.2 5E-08 1.7E-12 107.5 -3.9 137 931-1112 16-175 (186)
34 4fbr_A Lectin, myxobacterial h 98.2 6.9E-10 2.4E-14 125.8 -19.2 137 931-1112 44-202 (267)
35 3na7_A HP0958; flagellar bioge 98.2 0.00015 5.3E-09 83.4 24.9 16 1610-1625 38-53 (256)
36 3zx6_A HAMP, methyl-accepting 98.1 0.0098 3.3E-07 71.5 39.4 23 1780-1802 280-302 (341)
37 2p28_B Integrin beta-2; hybrid 98.1 5.3E-07 1.8E-11 100.6 1.7 97 1041-1160 103-214 (217)
38 2p28_B Integrin beta-2; hybrid 98.1 4.8E-07 1.6E-11 101.0 1.3 97 988-1112 102-214 (217)
39 3vkg_A Dynein heavy chain, cyt 98.1 0.00045 1.6E-08 102.1 32.0 11 658-668 1011-1021(3245)
40 3tbd_A Netrin-G2, laminet-2; l 98.0 9.9E-07 3.4E-11 103.1 2.0 49 337-395 266-314 (338)
41 2dfs_A Myosin-5A; myosin-V, in 98.0 0.0063 2.2E-07 83.3 39.1 27 1744-1770 1023-1049(1080)
42 2v71_A Nuclear distribution pr 97.9 0.0025 8.4E-08 68.0 23.8 23 1603-1625 16-38 (189)
43 3zx6_A HAMP, methyl-accepting 97.9 0.059 2E-06 64.7 39.0 36 1758-1793 262-297 (341)
44 1z1y_A Ookinete surface protei 97.8 6.3E-07 2.2E-11 98.7 -4.3 125 1003-1160 21-175 (186)
45 2b9c_A Striated-muscle alpha t 97.8 7.3E-05 2.5E-09 77.3 10.5 132 1647-1785 11-142 (147)
46 1tpg_A T-plasminogen activator 97.7 1E-05 3.5E-10 77.7 2.5 84 838-957 2-86 (91)
47 3o0z_A RHO-associated protein 97.7 0.006 2.1E-07 63.3 23.0 16 1735-1750 95-110 (168)
48 4a3z_A GH89_CBM32, alpha-N-ace 97.7 6.8E-05 2.3E-09 79.9 8.2 85 42-168 24-109 (161)
49 1hci_A Alpha-actinin 2; triple 97.6 0.042 1.4E-06 69.3 34.7 28 1773-1800 446-473 (476)
50 1hci_A Alpha-actinin 2; triple 97.6 0.059 2E-06 68.0 35.4 14 1519-1532 141-154 (476)
51 2b9c_A Striated-muscle alpha t 97.6 0.00063 2.2E-08 70.4 13.5 107 1641-1747 33-139 (147)
52 1cii_A Colicin IA; bacteriocin 97.6 0.23 7.8E-06 58.2 43.7 33 1639-1671 226-258 (602)
53 1cii_A Colicin IA; bacteriocin 97.5 0.24 8.3E-06 57.9 44.0 51 1633-1683 364-414 (602)
54 4gkw_A Spindle assembly abnorm 97.5 0.035 1.2E-06 53.6 22.9 138 1559-1703 18-155 (167)
55 1yo8_A Thrombospondin-2; EGF, 97.5 6.8E-05 2.3E-09 95.8 6.0 109 912-1061 4-145 (634)
56 1yo8_A Thrombospondin-2; EGF, 97.4 0.00016 5.5E-09 92.5 8.3 129 832-981 16-176 (634)
57 1tpg_A T-plasminogen activator 97.4 6.2E-05 2.1E-09 72.2 3.2 51 1047-1112 32-86 (91)
58 3kbt_A Beta-I spectrin, spectr 97.4 0.3 1E-05 58.0 35.9 14 1520-1533 15-28 (326)
59 4hpq_C ATG17, KLTH0D15642P; au 97.4 0.48 1.6E-05 57.2 43.0 48 1739-1786 324-371 (413)
60 3g67_A Methyl-accepting chemot 97.3 0.31 1E-05 53.9 34.0 14 1778-1791 192-205 (213)
61 1sjj_A Actinin; 3-helix bundle 97.3 0.025 8.6E-07 77.1 28.2 15 1519-1533 380-394 (863)
62 4a4a_A Alpha-N-acetylglucosami 97.3 0.00093 3.2E-08 88.0 12.8 84 42-169 22-105 (914)
63 3s84_A Apolipoprotein A-IV; fo 97.3 0.084 2.9E-06 60.8 27.4 23 1781-1803 229-251 (273)
64 3edv_A Spectrin beta chain, br 97.2 0.39 1.4E-05 56.9 34.6 22 1777-1798 296-317 (323)
65 3s84_A Apolipoprotein A-IV; fo 97.2 0.31 1.1E-05 56.0 31.8 18 1783-1800 253-270 (273)
66 2xs1_A Programmed cell death 6 97.2 0.16 5.3E-06 67.0 33.1 38 1608-1645 493-530 (704)
67 3kbt_A Beta-I spectrin, spectr 97.2 0.6 2.1E-05 55.4 35.7 27 1424-1450 39-65 (326)
68 2wg3_C Hedgehog-interacting pr 97.2 5.7E-05 2E-09 94.8 0.1 53 1041-1112 403-455 (463)
69 3oja_B Anopheles plasmodium-re 97.1 0.0023 7.8E-08 83.6 14.8 15 1772-1786 565-579 (597)
70 2efk_A CDC42-interacting prote 97.1 0.49 1.7E-05 55.6 33.6 20 1667-1686 123-142 (301)
71 1u4q_A Spectrin alpha chain, b 97.1 0.73 2.5E-05 54.5 38.1 22 1777-1798 292-313 (322)
72 4hpq_C ATG17, KLTH0D15642P; au 97.1 0.84 2.9E-05 55.2 40.0 13 1368-1380 50-62 (413)
73 2bou_A EGF-like module contain 97.1 0.00012 4.2E-09 76.6 1.5 96 832-957 14-134 (143)
74 1u4q_A Spectrin alpha chain, b 97.1 0.84 2.9E-05 54.0 36.9 24 1772-1795 294-317 (322)
75 3g67_A Methyl-accepting chemot 97.1 0.56 1.9E-05 51.8 32.8 16 1769-1784 190-205 (213)
76 2efl_A Formin-binding protein 97.0 0.56 1.9E-05 55.1 33.0 24 1667-1690 130-153 (305)
77 2ocy_A RAB guanine nucleotide 97.0 0.09 3.1E-06 54.1 21.3 20 1703-1722 116-135 (154)
78 2bou_A EGF-like module contain 97.0 0.00025 8.7E-09 74.2 2.4 100 1041-1160 14-134 (143)
79 2wg3_C Hedgehog-interacting pr 96.9 0.00014 4.9E-09 91.2 -0.1 77 1049-1160 379-455 (463)
80 1qu7_A Methyl-accepting chemot 96.9 0.85 2.9E-05 51.1 31.1 7 1793-1799 213-219 (227)
81 1tvg_A LOC51668 protein; cell 96.9 0.0014 4.9E-08 68.8 7.3 64 96-168 33-98 (153)
82 2yc2_A IFT25, intraflagellar t 96.9 0.0012 4.2E-08 68.5 6.6 64 96-168 25-90 (139)
83 3r6n_A Desmoplakin; spectrin r 96.8 0.55 1.9E-05 58.0 30.9 20 1553-1572 29-48 (450)
84 4dyl_A Tyrosine-protein kinase 96.8 1 3.4E-05 55.3 33.3 27 1770-1796 364-390 (406)
85 1f5n_A Interferon-induced guan 96.8 0.87 3E-05 58.2 32.9 118 1671-1794 463-582 (592)
86 2jda_A Yecbm32; hypothetical p 96.8 0.0016 5.4E-08 68.1 6.5 64 97-169 23-88 (145)
87 3haj_A Human pacsin2 F-BAR; pa 96.7 0.32 1.1E-05 61.3 28.8 26 1662-1687 138-163 (486)
88 2v0o_A FCHO2, FCH domain only 96.7 0.91 3.1E-05 52.4 30.7 42 1560-1601 19-61 (276)
89 2x3v_A Syndapin I, protein kin 96.6 1 3.5E-05 53.8 30.9 32 1662-1693 136-167 (337)
90 3ghg_A Fibrinogen alpha chain; 96.6 0.042 1.5E-06 65.9 17.5 18 1740-1757 141-158 (562)
91 2b5u_A Colicin E3; high resolu 96.5 0.3 1E-05 58.2 24.0 7 1715-1721 408-414 (551)
92 4a41_A GH89_CBM32-5, alpha-N-a 96.5 0.0027 9.3E-08 67.7 6.4 66 97-168 44-116 (161)
93 3f2z_A Uncharacterized protein 96.5 0.0042 1.4E-07 66.1 7.7 67 97-169 27-101 (159)
94 2w86_A Fibrillin-1, fibrillin1 96.4 0.00021 7.3E-09 75.1 -2.8 47 1047-1109 88-141 (147)
95 3ghg_A Fibrinogen alpha chain; 96.4 0.037 1.3E-06 66.4 15.4 34 1748-1781 121-154 (562)
96 3r6n_A Desmoplakin; spectrin r 96.4 3.2 0.00011 51.2 34.6 13 1561-1573 11-23 (450)
97 3edv_A Spectrin beta chain, br 96.3 2.6 9E-05 49.7 38.9 25 1770-1794 296-320 (323)
98 2b5u_A Colicin E3; high resolu 96.2 0.47 1.6E-05 56.6 23.1 9 1555-1563 290-298 (551)
99 3hnm_A Putative chitobiase; PS 96.2 0.0052 1.8E-07 66.0 6.5 67 97-169 38-115 (172)
100 3lei_A Platelet aggregation fa 96.2 0.011 3.8E-07 62.4 8.7 83 43-167 8-101 (153)
101 3eyp_A Putative alpha-L-fucosi 96.1 0.0072 2.5E-07 75.2 8.0 65 98-168 343-410 (469)
102 4a42_A GH89_CBM32-4, alpha-N-a 96.1 0.0069 2.4E-07 63.6 6.7 63 99-168 42-104 (149)
103 2xzr_A Immunoglobulin-binding 96.0 0.57 1.9E-05 42.9 17.5 29 1669-1697 57-85 (114)
104 3ggl_A Putative chitobiase; X- 96.0 0.01 3.5E-07 63.8 7.7 67 97-169 37-111 (169)
105 2j1a_A Hyaluronidase, CBM32; p 96.0 0.0065 2.2E-07 63.5 5.8 65 97-167 25-97 (150)
106 3abh_A Pacsin2, protein kinase 95.9 1.5 5E-05 51.8 26.7 24 1560-1583 30-53 (312)
107 3hnw_A Uncharacterized protein 95.8 0.19 6.5E-06 51.4 15.3 22 1555-1576 24-45 (138)
108 1x7a_L Coagulation factor IX, 95.7 0.0066 2.3E-07 63.5 4.4 37 911-957 48-84 (146)
109 2xs1_A Programmed cell death 6 95.7 7.1 0.00024 51.3 34.3 33 1616-1648 494-526 (704)
110 1x7a_L Coagulation factor IX, 95.7 0.0045 1.6E-07 64.7 3.1 67 1023-1112 49-126 (146)
111 2c4f_L Coagulation factor VII 95.6 0.002 6.9E-08 67.1 -0.1 73 1023-1112 48-129 (142)
112 4gwi_A Lectinolysin, platelet 95.6 0.024 8.4E-07 59.6 8.1 64 99-167 28-101 (153)
113 2c4f_L Coagulation factor VII 95.5 0.0018 6E-08 67.6 -0.9 65 886-957 61-129 (142)
114 3aco_A Pacsin2, protein kinase 95.5 1.6 5.4E-05 52.5 24.8 23 1560-1582 30-52 (350)
115 1nfu_B Coagulation factor XA, 95.4 0.0031 1.1E-07 68.9 0.7 67 1073-1160 42-121 (195)
116 2i1j_A Moesin; FERM, coiled-co 95.4 0.012 4.1E-07 75.3 6.1 32 1643-1674 339-370 (575)
117 3u7u_G Neuregulin 1; signaling 95.4 0.0052 1.8E-07 52.4 1.9 39 911-957 8-49 (55)
118 1nfu_B Coagulation factor XA, 95.3 0.0022 7.5E-08 70.1 -0.9 68 1023-1112 43-121 (195)
119 2efl_A Formin-binding protein 95.3 5.9 0.0002 46.2 30.6 10 1524-1533 29-38 (305)
120 1ic2_A Tropomyosin alpha chain 95.3 0.097 3.3E-06 48.5 10.2 22 1639-1660 41-62 (81)
121 2x3v_A Syndapin I, protein kin 95.3 4.6 0.00016 48.0 27.9 43 1559-1601 20-63 (337)
122 1uzk_A Fibrillin-1; glycoprote 95.2 0.0039 1.3E-07 66.6 0.6 103 931-1059 15-156 (162)
123 2i1j_A Moesin; FERM, coiled-co 95.2 0.015 5.2E-07 74.4 6.1 12 1784-1795 516-527 (575)
124 1s35_A Beta-I spectrin, spectr 95.2 2.9 9.9E-05 46.0 24.3 18 1555-1572 29-46 (214)
125 1aut_L Activated protein C; se 95.2 0.0093 3.2E-07 59.6 3.3 60 886-954 28-87 (114)
126 3ol1_A Vimentin; structural ge 95.2 0.32 1.1E-05 48.6 14.2 23 1640-1662 21-43 (119)
127 1n7d_A LDL receptor, low-densi 95.1 1.5 5.1E-05 57.9 25.2 48 1091-1155 307-364 (699)
128 3haj_A Human pacsin2 F-BAR; pa 95.1 1.6 5.6E-05 54.7 24.4 43 1559-1601 22-65 (486)
129 1dx5_I Thrombomodulin; serine 95.1 0.0016 5.4E-08 65.7 -2.7 50 1042-1108 55-111 (118)
130 1a3p_A Epidermal growth factor 95.0 0.014 4.6E-07 47.8 3.0 36 914-957 3-41 (45)
131 1edm_B Factor IX; epidermal gr 94.9 0.017 5.7E-07 45.6 3.4 36 912-957 4-39 (39)
132 4dyl_A Tyrosine-protein kinase 94.9 7.3 0.00025 47.6 28.8 22 1674-1695 134-155 (406)
133 3i2w_A Syndapin, LD46328P; EFC 94.9 1.5 5E-05 51.2 21.7 23 1664-1686 125-147 (290)
134 3fb2_A Spectrin alpha chain, b 94.9 1.8 6.3E-05 48.0 21.5 61 1736-1796 151-215 (218)
135 3h5c_B Vitamin K-dependent pro 94.9 0.019 6.5E-07 68.4 5.3 75 912-1027 6-84 (317)
136 2v66_B Nuclear distribution pr 94.9 1.2 4.1E-05 43.3 16.6 26 1764-1789 76-101 (111)
137 3abh_A Pacsin2, protein kinase 94.8 8.3 0.00028 45.2 29.0 31 1664-1694 147-177 (312)
138 1uzk_A Fibrillin-1; glycoprote 94.8 0.00095 3.2E-08 71.4 -5.6 72 941-1025 74-161 (162)
139 4dvy_P Cytotoxicity-associated 94.8 1.5 5.2E-05 52.2 20.4 7 1284-1290 426-432 (876)
140 3edu_A Beta-I spectrin, spectr 94.7 3 0.0001 46.2 22.8 12 1559-1570 34-45 (218)
141 3tnu_A Keratin, type I cytoske 94.7 0.33 1.1E-05 49.5 13.3 6 1784-1789 117-122 (131)
142 1m1j_B Fibrinogen beta chain; 94.7 0.71 2.4E-05 56.4 18.4 17 1774-1790 177-193 (464)
143 2vh0_B Activated factor XA lig 94.7 0.0067 2.3E-07 62.5 0.5 67 1073-1160 42-121 (134)
144 3u7u_G Neuregulin 1; signaling 94.6 0.012 4.2E-07 50.1 2.0 35 1073-1112 8-49 (55)
145 2vh0_B Activated factor XA lig 94.6 0.0051 1.7E-07 63.4 -0.5 68 1023-1112 43-121 (134)
146 2bsg_A Fibritin; viral protein 94.6 0.022 7.4E-07 68.4 4.6 31 1761-1791 424-454 (487)
147 3fb2_A Spectrin alpha chain, b 94.5 3.7 0.00013 45.4 22.8 23 1553-1575 40-62 (218)
148 1dx5_I Thrombomodulin; serine 94.5 0.0045 1.5E-07 62.3 -1.2 84 838-953 24-111 (118)
149 2efk_A CDC42-interacting prote 94.5 9.5 0.00032 44.4 32.7 12 1522-1533 20-31 (301)
150 1u5p_A Spectrin alpha chain, b 94.4 7.5 0.00026 42.7 25.4 15 1519-1533 13-27 (216)
151 4dvy_P Cytotoxicity-associated 94.3 12 0.00042 44.8 28.1 18 1662-1679 692-709 (876)
152 2nrj_A HBL B protein; enteroto 94.2 1.3 4.4E-05 52.8 19.0 79 1641-1719 252-335 (346)
153 3urf_Z Tumor necrosis factor r 94.2 0.01 3.6E-07 63.4 0.9 114 785-917 10-142 (171)
154 1cun_A Protein (alpha spectrin 94.2 5.6 0.00019 43.6 23.4 15 1777-1791 190-204 (213)
155 3tnu_A Keratin, type I cytoske 94.2 0.57 1.9E-05 47.7 13.5 20 1639-1658 38-57 (131)
156 1sg1_X Tumor necrosis factor r 94.2 0.013 4.4E-07 62.4 1.4 14 800-813 13-26 (161)
157 4dvz_A Cytotoxicity-associated 94.1 11 0.00037 43.5 29.0 29 1504-1532 349-377 (569)
158 1quu_A Human skeletal muscle a 94.1 9 0.00031 43.3 25.3 16 1557-1572 46-61 (250)
159 1m1j_A Fibrinogen alpha subuni 94.1 1 3.5E-05 53.4 16.8 16 1783-1798 143-158 (491)
160 1m1j_A Fibrinogen alpha subuni 94.0 0.98 3.3E-05 53.5 16.6 16 1738-1753 140-155 (491)
161 3urf_Z Tumor necrosis factor r 94.0 0.015 5.3E-07 62.1 1.5 36 945-980 22-68 (171)
162 3mq9_A Bone marrow stromal ant 93.9 0.66 2.3E-05 58.2 16.8 27 1758-1784 443-469 (471)
163 1n7d_A LDL receptor, low-densi 93.9 0.61 2.1E-05 61.6 17.0 64 931-1026 306-372 (699)
164 1jma_B Herpesvirus entry media 93.9 0.018 6.1E-07 61.6 1.8 75 848-951 13-88 (167)
165 3tnu_B Keratin, type II cytosk 93.9 1.1 3.7E-05 45.5 14.9 17 1640-1656 37-53 (129)
166 3mq7_A Bone marrow stromal ant 93.8 1.6 5.6E-05 41.8 14.5 41 1759-1799 72-112 (121)
167 1u5p_A Spectrin alpha chain, b 93.8 7.2 0.00025 42.8 23.2 26 1736-1761 141-166 (216)
168 3me4_A Tumor necrosis factor r 93.7 0.012 4.2E-07 65.3 0.2 28 952-979 64-92 (216)
169 3plt_A Sphingolipid long chain 93.7 3.4 0.00012 45.5 19.1 25 1661-1685 63-87 (234)
170 1k36_A Epiregulin; EGF-like fo 93.7 0.024 8.3E-07 46.5 1.8 27 931-957 17-43 (46)
171 2ddu_A Reelin; beta-jelly-roll 93.7 0.052 1.8E-06 64.4 5.3 133 126-313 71-218 (387)
172 3m3w_A Pacsin3, protein kinase 93.6 12 0.00042 44.0 26.0 23 1560-1582 21-43 (320)
173 3mq7_A Bone marrow stromal ant 93.6 2.3 8E-05 40.8 15.2 8 1742-1749 76-83 (121)
174 2w86_A Fibrillin-1, fibrillin1 93.6 0.0038 1.3E-07 65.5 -4.1 19 1004-1023 126-144 (147)
175 1s35_A Beta-I spectrin, spectr 93.5 11 0.00036 41.4 24.9 12 1741-1752 144-155 (214)
176 2q13_A DCC-interacting protein 93.5 15 0.00052 44.4 27.2 23 1773-1795 232-254 (385)
177 1mox_A Epidermal growth factor 93.4 0.039 1.3E-06 69.3 4.0 79 880-977 221-306 (501)
178 3k51_B Decoy receptor 3; DCR3, 93.4 0.021 7E-07 61.5 1.2 36 945-980 24-70 (176)
179 1egf_A Epidermal growth factor 93.3 0.066 2.3E-06 45.3 4.0 38 912-957 4-44 (53)
180 1aut_L Activated protein C; se 93.2 0.041 1.4E-06 54.9 3.0 59 1081-1156 22-86 (114)
181 3ca7_A Protein spitz; argos, E 93.2 0.012 4E-07 49.8 -0.9 27 931-957 20-48 (52)
182 3aco_A Pacsin2, protein kinase 93.1 14 0.0005 43.9 26.0 26 1667-1692 150-175 (350)
183 2jee_A YIIU; FTSZ, septum, coi 93.1 1.5 5E-05 40.0 12.5 36 1759-1794 42-77 (81)
184 2q12_A DIP13 alpha, DCC-intera 93.1 15 0.0005 42.0 29.8 39 1762-1800 221-259 (265)
185 1k12_A Lectin; beta barrel, pr 93.1 0.24 8E-06 52.4 8.9 82 42-159 6-96 (158)
186 3l4q_C Phosphatidylinositol 3- 93.1 5.7 0.0002 41.6 18.8 38 1759-1796 118-155 (170)
187 2q12_A DIP13 alpha, DCC-intera 93.0 15 0.00052 41.8 28.5 22 1468-1489 19-40 (265)
188 3ues_A Alpha-1,3/4-fucosidase; 92.9 0.096 3.3E-06 65.1 6.3 66 98-169 368-436 (478)
189 3me4_A Tumor necrosis factor r 92.8 0.019 6.3E-07 63.9 -0.3 25 952-976 147-171 (216)
190 3h5c_B Vitamin K-dependent pro 92.7 0.11 3.6E-06 61.8 6.3 56 886-954 19-77 (317)
191 1cun_A Protein (alpha spectrin 92.7 14 0.00047 40.4 29.1 7 1523-1529 14-20 (213)
192 2a01_A Apolipoprotein A-I; fou 92.7 0.27 9.2E-06 55.8 9.2 17 1782-1798 223-239 (243)
193 1emn_A Fibrillin; extracellula 92.6 0.068 2.3E-06 49.8 3.4 51 1042-1108 19-76 (82)
194 3swk_A Vimentin; cytoskeleton, 92.6 0.9 3.1E-05 42.5 10.9 25 1644-1668 5-29 (86)
195 2w2n_E LDL receptor, low-densi 92.6 0.029 9.9E-07 55.2 0.9 62 932-1025 42-106 (107)
196 3q8t_A Beclin-1; autophagy, AT 92.6 3.6 0.00012 39.2 15.3 19 1756-1774 72-90 (96)
197 2a01_A Apolipoprotein A-I; fou 92.6 3.4 0.00012 46.7 18.1 10 1506-1515 14-23 (243)
198 2jee_A YIIU; FTSZ, septum, coi 92.4 1.4 4.8E-05 40.1 11.3 32 1691-1722 9-40 (81)
199 1emn_A Fibrillin; extracellula 92.3 0.066 2.2E-06 49.9 3.0 24 931-956 17-42 (82)
200 1f5n_A Interferon-induced guan 92.3 32 0.0011 43.8 29.7 15 1773-1787 568-582 (592)
201 3fl7_A Ephrin receptor; ATP-bi 92.3 0.051 1.8E-06 69.0 2.9 61 1041-1107 257-320 (536)
202 2v4h_A NF-kappa-B essential mo 92.2 1.4 4.8E-05 42.1 11.7 9 1741-1749 66-74 (110)
203 2fic_A Bridging integrator 1; 92.2 18 0.00062 40.8 25.2 13 1559-1571 52-64 (251)
204 2no2_A HIP-I, huntingtin-inter 92.2 6.9 0.00024 38.0 16.9 46 1746-1791 56-101 (107)
205 2v4h_A NF-kappa-B essential mo 92.1 1.5 5.1E-05 41.9 11.7 11 1614-1624 27-37 (110)
206 3swk_A Vimentin; cytoskeleton, 92.1 1.2 4.2E-05 41.5 11.1 61 1736-1796 20-80 (86)
207 3a7p_A Autophagy protein 16; c 92.0 1.4 4.7E-05 44.9 12.0 60 1736-1795 74-133 (152)
208 3cve_A Homer protein homolog 1 91.9 1.7 5.8E-05 38.7 11.1 62 1709-1770 7-68 (72)
209 2j1v_A Fucolectin-related prot 91.9 0.4 1.4E-05 50.2 8.7 80 40-160 11-99 (151)
210 2ap3_A Conserved hypothetical 91.9 1.9 6.4E-05 46.5 13.8 27 1765-1791 169-195 (199)
211 3edu_A Beta-I spectrin, spectr 91.9 15 0.00051 40.4 22.3 29 1774-1802 189-217 (218)
212 3qd6_R CD40L receptor, tumor n 91.9 0.093 3.2E-06 56.6 3.9 26 951-976 119-144 (177)
213 1w8o_A Bacterial sialidase; 3D 91.8 0.19 6.6E-06 65.2 7.7 66 97-168 477-552 (601)
214 3cqo_A FBP32; F-lectin, fucole 91.7 0.25 8.5E-06 57.9 7.7 58 97-159 168-233 (293)
215 4dvz_A Cytotoxicity-associated 91.7 23 0.0008 40.9 29.7 7 1527-1533 318-324 (569)
216 1sg1_X Tumor necrosis factor r 91.6 0.1 3.5E-06 55.4 3.8 14 1057-1070 115-128 (161)
217 3tul_A Cell invasion protein S 91.6 1.5 5.1E-05 43.8 11.4 17 1653-1669 76-92 (158)
218 3q8t_A Beclin-1; autophagy, AT 91.5 5.7 0.00019 37.9 15.3 37 1748-1784 57-93 (96)
219 3tul_A Cell invasion protein S 91.5 1.5 5E-05 43.8 11.3 8 1662-1669 78-85 (158)
220 1lmj_A Fibrillin 1; EGF, calci 91.4 0.035 1.2E-06 52.3 -0.1 23 932-956 17-44 (86)
221 3fl7_A Ephrin receptor; ATP-bi 91.4 0.064 2.2E-06 68.1 2.2 60 1091-1155 257-320 (536)
222 3k51_B Decoy receptor 3; DCR3, 91.3 0.056 1.9E-06 58.1 1.4 107 793-918 24-145 (176)
223 2hey_R Tumor necrosis factor r 91.3 0.039 1.3E-06 57.6 0.1 72 1007-1079 38-120 (146)
224 3cvf_A Homer-3, homer protein 91.2 1.2 4.2E-05 40.4 9.7 62 1709-1770 13-74 (79)
225 1edm_B Factor IX; epidermal gr 91.0 0.11 3.8E-06 40.7 2.5 34 1074-1112 4-39 (39)
226 2q13_A DCC-interacting protein 91.0 33 0.0011 41.4 27.2 31 1760-1790 226-256 (385)
227 3l4q_C Phosphatidylinositol 3- 91.0 11 0.00037 39.6 18.0 43 1735-1777 101-143 (170)
228 3qwe_A GMIP, GEM-interacting p 91.0 26 0.00088 40.0 29.4 6 1592-1597 48-53 (279)
229 3bn6_A Lactadherin; anticoagul 90.9 0.18 6.3E-06 53.2 4.9 69 97-169 32-105 (158)
230 1m1j_C Fibrinogen gamma chain; 90.9 3.4 0.00012 49.9 16.3 10 1759-1768 106-115 (409)
231 2v72_A CBM32, EXO-alpha-sialid 90.8 0.21 7.2E-06 51.4 5.2 62 97-164 26-94 (143)
232 3i00_A HIP-I, huntingtin-inter 90.8 1 3.6E-05 44.6 9.7 22 1698-1719 95-116 (120)
233 2avr_X Adhesion A; antiparalle 90.7 7.4 0.00025 38.0 15.2 10 1738-1747 72-81 (119)
234 3u3p_A Tumor necrosis factor r 90.7 0.11 3.7E-06 60.1 3.0 52 892-951 44-97 (313)
235 1hae_A Heregulin-alpha; growth 90.6 0.062 2.1E-06 47.3 0.7 38 912-957 7-47 (63)
236 2w2n_E LDL receptor, low-densi 90.6 0.077 2.6E-06 52.2 1.5 51 1041-1108 42-100 (107)
237 2odv_A Plectin 1, HD1; plakin 90.6 25 0.00086 39.3 22.8 23 1775-1797 200-222 (235)
238 3ghg_B Fibrinogen beta chain; 90.6 2.7 9.3E-05 50.7 14.8 24 1767-1790 165-188 (461)
239 3cqo_A FBP32; F-lectin, fucole 90.5 0.31 1E-05 57.1 6.9 64 43-146 2-71 (293)
240 1nql_B Epidermal growth factor 90.5 0.07 2.4E-06 45.2 0.9 27 931-957 18-44 (53)
241 4h22_A Leucine-rich repeat fli 90.4 2.1 7.2E-05 40.5 10.7 57 1742-1798 28-84 (103)
242 1ext_A Tumor necrosis factor r 90.3 0.027 9.3E-07 59.9 -2.3 53 893-951 40-93 (162)
243 3u0c_A Invasin IPAB, 62 kDa an 90.2 18 0.0006 36.9 20.7 8 1781-1788 189-196 (201)
244 2v5d_A O-GLCNACASE NAGJ; famil 90.1 0.25 8.4E-06 65.3 6.1 67 97-169 612-686 (737)
245 4fla_A Regulation of nuclear P 90.0 9 0.00031 39.7 16.4 27 1741-1767 114-140 (152)
246 3uun_A Dystrophin; triple heli 89.9 4.8 0.00016 39.5 14.2 23 1707-1729 83-105 (119)
247 2hey_R Tumor necrosis factor r 89.9 0.15 5E-06 53.2 3.0 71 1109-1179 39-124 (146)
248 1m1j_C Fibrinogen gamma chain; 89.7 3 0.0001 50.4 14.5 32 1760-1791 100-131 (409)
249 3ltf_D Protein spitz; receptor 89.7 0.07 2.4E-06 46.1 0.3 31 931-961 20-53 (58)
250 2qih_A Protein USPA1; trimeric 89.7 17 0.00057 35.9 22.5 19 1758-1776 117-135 (157)
251 3u3p_A Tumor necrosis factor r 89.6 0.093 3.2E-06 60.6 1.3 99 800-917 44-148 (313)
252 1k3i_A Galactose oxidase precu 89.6 0.35 1.2E-05 63.5 7.0 66 97-168 41-117 (656)
253 3ca7_A Protein spitz; argos, E 89.6 0.03 1E-06 47.2 -2.1 15 1098-1112 34-48 (52)
254 3alq_R Tumor necrosis factor r 89.5 0.052 1.8E-06 58.4 -0.8 52 892-951 40-93 (173)
255 2avr_X Adhesion A; antiparalle 89.3 12 0.00041 36.6 15.3 16 1671-1686 6-21 (119)
256 3m0c_C LDL receptor, low-densi 89.0 0.37 1.3E-05 64.3 6.6 64 931-1026 324-390 (791)
257 2k2s_B Micronemal protein 6; m 88.7 0.083 2.8E-06 46.0 -0.0 39 911-957 11-50 (61)
258 1z6c_A Vitamin K-dependent pro 88.5 0.21 7.1E-06 47.0 2.6 53 1041-1111 17-77 (87)
259 1fio_A SSO1 protein; four heli 88.2 31 0.0011 37.2 21.0 18 1774-1791 164-181 (196)
260 1czt_A Protein (coagulation fa 88.2 0.43 1.5E-05 50.5 5.2 56 113-169 44-104 (160)
261 1a3p_A Epidermal growth factor 87.9 0.26 8.9E-06 40.0 2.5 28 1080-1112 10-41 (45)
262 1jma_B Herpesvirus entry media 87.8 0.15 5.1E-06 54.4 1.3 96 437-554 33-134 (167)
263 2j22_A Fucolectin-related prot 87.7 0.93 3.2E-05 47.2 7.3 65 41-146 8-78 (148)
264 3ghg_C Fibrinogen gamma chain; 87.6 2.9 0.0001 50.1 12.3 22 1767-1788 107-128 (411)
265 1z6c_A Vitamin K-dependent pro 87.5 0.3 1E-05 45.9 3.1 58 886-957 18-78 (87)
266 3cl3_D NF-kappa-B essential mo 87.2 1.3 4.4E-05 43.3 7.2 35 1643-1677 13-47 (130)
267 1dn1_B Syntaxin 1A, syntaxin b 87.1 25 0.00087 40.1 19.6 25 1751-1775 193-217 (267)
268 3p5b_L Low density lipoprotein 87.0 0.44 1.5E-05 58.5 5.0 64 931-1026 12-78 (400)
269 1lmj_A Fibrillin 1; EGF, calci 86.9 0.099 3.4E-06 49.1 -0.7 56 886-953 18-79 (86)
270 3uul_A Utrophin; spectrin repe 86.7 6.1 0.00021 38.7 12.5 23 1707-1729 83-105 (118)
271 1uru_A Amphiphysin; endocytosi 86.5 45 0.0015 37.2 22.0 7 1524-1530 77-83 (244)
272 2w1s_A Hyaluronoglucosaminidas 86.1 0.8 2.7E-05 49.9 6.0 54 115-169 51-114 (192)
273 3cl3_D NF-kappa-B essential mo 85.9 1.2 4.1E-05 43.5 6.2 23 1736-1758 82-104 (130)
274 4deq_A Neuropilin-1, vascular 85.9 0.59 2E-05 51.9 4.8 55 114-169 43-104 (218)
275 3nmd_A CGMP dependent protein 85.7 2.4 8.2E-05 37.6 7.4 44 1748-1791 23-66 (72)
276 1fxk_A Prefoldin; archaeal pro 85.4 9.7 0.00033 36.9 12.9 38 1760-1797 67-104 (107)
277 3qd6_R CD40L receptor, tumor n 85.3 0.74 2.5E-05 49.5 5.1 95 437-553 35-132 (177)
278 1skz_A Antistasin; factor XA i 85.2 0.28 9.6E-06 48.3 1.6 90 1074-1176 6-107 (119)
279 3m0c_C LDL receptor, low-densi 85.1 1 3.6E-05 60.0 7.5 50 1041-1107 325-382 (791)
280 2l7b_A Apolipoprotein E, APO-E 85.0 1.7 5.9E-05 50.6 8.3 16 1560-1575 33-48 (307)
281 2uwi_A CRME protein; receptor, 84.9 0.17 5.9E-06 52.3 -0.1 55 793-847 19-88 (142)
282 2wuh_A Discoidin domain recept 84.8 1.5 5.1E-05 47.1 7.2 55 114-169 57-121 (178)
283 1mox_A Epidermal growth factor 84.8 0.54 1.8E-05 59.0 4.3 74 1096-1176 221-306 (501)
284 1bf5_A Signal transducer and a 84.6 47 0.0016 41.5 21.1 19 1779-1797 161-179 (575)
285 3pe0_A Plectin; cytoskeleton, 84.5 15 0.00052 42.3 16.2 22 1767-1788 159-180 (283)
286 3m3w_A Pacsin3, protein kinase 84.5 69 0.0024 37.5 26.3 19 1667-1685 141-159 (320)
287 1jhj_A APC10; beta sandwich, j 84.4 0.82 2.8E-05 48.4 4.8 66 97-169 38-108 (171)
288 2e26_A Reelin, reeler protein; 84.4 1.3 4.5E-05 56.8 7.4 40 265-317 524-565 (725)
289 1egf_A Epidermal growth factor 84.1 0.76 2.6E-05 38.7 3.6 28 1080-1112 13-44 (53)
290 4h8s_A DCC-interacting protein 84.0 84 0.0029 38.1 33.1 12 1471-1482 45-56 (407)
291 1jcd_A Major outer membrane li 83.4 5 0.00017 33.5 7.9 10 1692-1701 36-45 (52)
292 2cho_A Glucosaminidase, hexosa 83.4 0.36 1.2E-05 63.1 1.9 65 98-168 603-671 (716)
293 3uux_B Mitochondrial division 83.2 7.8 0.00027 42.5 11.7 68 1612-1679 157-224 (242)
294 2bsg_A Fibritin; viral protein 82.9 2.3 7.7E-05 51.4 8.2 29 1592-1620 56-84 (487)
295 1bf5_A Signal transducer and a 82.8 35 0.0012 42.6 18.9 12 1774-1785 163-174 (575)
296 2fd6_A Urokinase-type plasmino 82.7 1.2 4E-05 44.8 5.0 33 917-957 1-34 (122)
297 1skz_A Antistasin; factor XA i 82.4 0.52 1.8E-05 46.4 2.1 81 1041-1132 18-110 (119)
298 1wt6_A Myotonin-protein kinase 82.4 12 0.00042 33.8 10.5 31 1653-1683 38-68 (81)
299 2d1l_A Metastasis suppressor p 82.4 70 0.0024 36.0 25.7 14 1671-1684 110-123 (253)
300 2qqj_A Neuropilin-2; VEGF rece 82.3 1.1 3.8E-05 53.2 5.5 66 98-169 34-106 (325)
301 4e40_A Putative uncharacterize 82.2 55 0.0019 34.6 23.6 27 1503-1529 122-148 (252)
302 3uul_A Utrophin; spectrin repe 82.1 17 0.00059 35.4 13.5 15 1671-1685 6-20 (118)
303 3cvf_A Homer-3, homer protein 82.0 8.7 0.0003 34.9 9.7 52 1741-1792 24-75 (79)
304 3tje_F Tumor necrosis factor r 82.0 0.62 2.1E-05 48.8 2.7 76 848-951 41-118 (156)
305 3pe0_A Plectin; cytoskeleton, 81.8 80 0.0027 36.2 21.7 28 1766-1793 151-178 (283)
306 2qqi_A Neuropilin-1; VEGF rece 81.8 1.2 4.1E-05 52.7 5.5 66 98-169 33-105 (318)
307 3iox_A AGI/II, PA; alpha helix 81.4 27 0.00094 42.3 16.6 9 1773-1781 88-96 (497)
308 1k36_A Epiregulin; EGF-like fo 81.4 0.41 1.4E-05 39.1 0.9 28 1079-1112 12-43 (46)
309 4h8s_A DCC-interacting protein 81.4 1E+02 0.0035 37.3 33.2 29 1768-1796 250-278 (407)
310 3iox_A AGI/II, PA; alpha helix 81.2 31 0.0011 41.9 17.0 24 1773-1796 81-104 (497)
311 1iox_A Betacellulin; EGF-like 81.1 0.57 1.9E-05 39.0 1.6 27 931-957 19-45 (50)
312 1uru_A Amphiphysin; endocytosi 80.6 76 0.0026 35.3 24.1 15 1558-1572 36-50 (244)
313 3hhm_B NISH2 P85alpha; PI3KCA, 80.2 30 0.001 41.3 16.8 39 1732-1770 207-245 (373)
314 3alq_R Tumor necrosis factor r 80.2 0.22 7.4E-06 53.5 -1.6 93 439-554 41-139 (173)
315 1wt6_A Myotonin-protein kinase 80.1 16 0.00056 33.0 10.5 23 1657-1679 49-71 (81)
316 1hae_A Heregulin-alpha; growth 79.9 0.31 1.1E-05 42.8 -0.4 32 1076-1112 9-47 (63)
317 1ez3_A Syntaxin-1A; three heli 79.9 51 0.0017 32.8 16.8 10 1670-1679 15-24 (127)
318 2qqi_A Neuropilin-1; VEGF rece 79.8 3.1 0.0001 49.2 8.1 67 97-169 188-262 (318)
319 1ext_A Tumor necrosis factor r 79.7 0.22 7.4E-06 52.9 -1.7 116 376-528 38-158 (162)
320 3trt_A Vimentin; cytoskeleton, 79.7 17 0.00057 33.0 11.2 12 1710-1721 10-21 (77)
321 3s4r_A Vimentin; alpha-helix, 79.7 14 0.00047 35.0 10.8 31 1761-1791 59-89 (93)
322 3cve_A Homer protein homolog 1 79.6 21 0.00073 31.8 11.1 51 1741-1791 18-68 (72)
323 1nfn_A Apolipoprotein E3; lipi 79.0 13 0.00045 40.1 12.0 8 1676-1683 75-82 (191)
324 2vm9_A Discoidin-2, discoidin 78.8 1.9 6.5E-05 49.3 5.6 55 114-169 49-106 (257)
325 2ahx_A P180ERBB4, receptor tyr 78.8 1 3.5E-05 58.2 3.7 31 875-905 544-576 (617)
326 3okq_A BUD site selection prot 78.6 59 0.002 32.8 16.5 15 1672-1686 26-40 (141)
327 3v65_B Low-density lipoprotein 78.5 0.5 1.7E-05 57.7 0.7 58 886-957 17-83 (386)
328 3e50_C Protransforming growth 78.4 0.88 3E-05 37.8 1.9 27 931-957 19-45 (50)
329 1jcd_A Major outer membrane li 78.3 9.5 0.00032 31.8 7.9 19 1691-1709 28-46 (52)
330 3qh9_A Liprin-beta-2; coiled-c 78.0 23 0.00079 32.0 10.8 23 1765-1787 54-76 (81)
331 1n8y_C Protooncoprotein; tyros 77.6 1.6 5.3E-05 56.2 4.9 81 880-977 228-314 (608)
332 3lbx_B Beta-I spectrin, spectr 77.6 44 0.0015 35.6 15.9 172 1605-1779 5-185 (185)
333 2xu6_A MDV1 coiled coil; prote 77.5 15 0.0005 32.6 9.2 51 1628-1678 17-67 (72)
334 1m6b_A C-ER, receptor protein- 77.5 0.96 3.3E-05 58.4 2.9 81 880-977 221-305 (621)
335 2iak_A Bullous pemphigoid anti 77.3 16 0.00054 40.5 12.6 16 1741-1756 157-172 (224)
336 3p5b_L Low density lipoprotein 77.2 1.4 5E-05 53.8 4.3 51 1041-1108 13-71 (400)
337 2xdj_A Uncharacterized protein 76.5 20 0.00068 33.1 10.5 33 1762-1794 31-63 (83)
338 2uwi_A CRME protein; receptor, 76.5 0.73 2.5E-05 47.6 1.1 67 437-514 34-101 (142)
339 3tje_F Tumor necrosis factor r 76.4 0.97 3.3E-05 47.3 2.0 64 439-514 64-130 (156)
340 2zuo_A MVP, major vault protei 76.4 1.9E+02 0.0066 37.6 25.0 6 1615-1620 649-654 (861)
341 3efg_A Protein SLYX homolog; x 76.3 6.1 0.00021 36.1 7.0 51 1742-1792 12-62 (78)
342 1gqe_A Release factor 2, RF2; 75.7 27 0.00093 41.3 14.1 14 1777-1790 99-112 (365)
343 2rnl_A Amphiregulin; AR, color 75.4 1.3 4.4E-05 36.8 2.1 27 931-957 23-49 (50)
344 3i2t_A Epidermal growth factor 75.1 0.97 3.3E-05 57.2 2.0 126 801-977 166-303 (551)
345 3thf_A Protein shroom; coiled- 75.0 90 0.0031 33.1 26.8 16 1776-1791 166-181 (190)
346 1wle_A Seryl-tRNA synthetase; 74.8 20 0.0007 44.6 13.6 11 1606-1616 43-53 (501)
347 3a5c_G V-type ATP synthase sub 74.5 91 0.0031 34.4 17.4 7 1550-1556 97-103 (223)
348 2k2s_B Micronemal protein 6; m 74.3 0.5 1.7E-05 41.1 -0.7 34 1074-1112 12-50 (61)
349 3v65_B Low-density lipoprotein 74.2 0.76 2.6E-05 56.0 0.7 55 1041-1112 16-83 (386)
350 2e26_A Reelin, reeler protein; 74.2 0.57 1.9E-05 60.0 -0.5 46 1049-1112 520-565 (725)
351 1gqp_A DOC1/APC10; cell cycle, 73.5 4.5 0.00016 44.3 6.4 57 97-160 69-131 (221)
352 4fhq_A Tumor necrosis factor r 73.5 0.56 1.9E-05 47.9 -0.7 56 438-504 36-93 (134)
353 3lbx_A Spectrin alpha chain, e 73.4 29 0.00099 36.3 12.6 15 1710-1724 135-149 (161)
354 1xdt_R Hbegf, heparin-binding 73.4 1.1 3.8E-05 40.8 1.3 27 931-957 51-77 (79)
355 3hny_M Coagulation factor VIII 73.3 2.8 9.7E-05 44.0 4.7 55 114-169 47-106 (159)
356 2zxq_A Endo-alpha-N-acetylgala 73.2 0.7 2.4E-05 62.5 0.0 68 97-169 1243-1321(1376)
357 1t3j_A Mitofusin 1; coiled coi 72.8 15 0.0005 34.7 8.6 65 1608-1676 29-94 (96)
358 2fd6_A Urokinase-type plasmino 72.7 2 6.8E-05 43.1 3.2 58 1079-1160 1-63 (122)
359 3nmd_A CGMP dependent protein 72.0 11 0.00036 33.6 7.1 22 1760-1781 42-63 (72)
360 3zbh_A ESXA; unknown function, 71.8 59 0.002 30.4 13.5 19 1554-1572 7-25 (99)
361 1yy9_A Epidermal growth factor 71.7 2 6.8E-05 55.5 3.6 81 880-977 221-306 (624)
362 3gwk_C SAG1039, putative uncha 71.6 50 0.0017 31.0 12.8 20 1554-1573 6-25 (98)
363 1bg1_A Protein (transcription 71.4 71 0.0024 40.2 17.1 18 1780-1797 175-192 (596)
364 3l39_A Putative PHOU-like phos 71.2 1.3E+02 0.0044 33.2 20.1 180 1467-1658 30-222 (227)
365 2ahx_A P180ERBB4, receptor tyr 71.1 1.1 3.8E-05 57.9 1.1 88 882-976 495-593 (617)
366 1i6z_A BAG-family molecular ch 70.8 81 0.0028 31.6 13.9 30 1768-1797 99-128 (135)
367 2p26_A Integrin beta-2; hybrid 70.7 1.9 6.6E-05 49.6 2.9 15 790-804 207-221 (280)
368 1x8y_A Lamin A/C; structural p 70.6 28 0.00097 32.3 10.3 14 1783-1796 67-80 (86)
369 3iyk_A VP5; icosahedral virus; 70.3 2E+02 0.0067 34.9 31.5 289 1498-1795 22-324 (526)
370 1du3_A Death receptor 5; trail 70.1 1.1 3.9E-05 45.4 0.7 79 439-530 39-121 (130)
371 4dnd_A Syntaxin-10, SYN10; str 70.0 43 0.0015 33.7 12.2 87 1576-1662 34-128 (130)
372 4fi5_A Nucleoprotein; structur 69.9 37 0.0013 32.5 10.7 62 1641-1702 24-90 (113)
373 4fi5_A Nucleoprotein; structur 69.8 24 0.0008 33.9 9.3 69 1655-1723 24-97 (113)
374 2iak_A Bullous pemphigoid anti 69.5 54 0.0018 36.1 14.5 184 1542-1727 36-224 (224)
375 2xdj_A Uncharacterized protein 69.3 29 0.00099 32.0 9.8 72 1637-1708 4-75 (83)
376 3lbx_A Spectrin alpha chain, e 69.2 46 0.0016 34.7 13.1 122 1672-1797 27-159 (161)
377 2ic9_A Nucleocapsid protein; h 68.9 39 0.0013 31.7 10.4 63 1640-1702 6-73 (96)
378 3hd7_B Syntaxin-1A; membrane p 68.5 58 0.002 31.7 12.5 80 1646-1725 7-86 (109)
379 1nql_B Epidermal growth factor 68.5 1.6 5.5E-05 36.8 1.2 36 1078-1118 11-50 (53)
380 1bg1_A Protein (transcription 68.3 65 0.0022 40.6 15.8 156 1632-1788 13-190 (596)
381 1x8y_A Lamin A/C; structural p 68.3 25 0.00086 32.7 9.3 85 1701-1788 2-86 (86)
382 2dq0_A Seryl-tRNA synthetase; 68.0 12 0.0004 46.3 9.3 102 1669-1774 4-106 (455)
383 4efa_E V-type proton ATPase su 67.9 1.5E+02 0.0052 32.8 17.9 112 1663-1774 11-124 (233)
384 2zdi_C Prefoldin subunit alpha 67.9 17 0.00058 37.7 9.1 93 1591-1683 10-142 (151)
385 1g1s_A P-selectin; selectin, l 67.8 1.5 5.2E-05 46.1 1.1 39 912-960 120-161 (162)
386 4efa_E V-type proton ATPase su 67.7 1.5E+02 0.0052 32.7 18.6 117 1677-1799 11-128 (233)
387 1ek9_A Outer membrane protein 67.6 2.1E+02 0.0071 34.2 33.0 233 1570-1802 79-398 (428)
388 1qoy_A Hemolysin E; toxin, mem 67.6 1.7E+02 0.006 33.3 23.4 223 1427-1663 21-273 (318)
389 3fpp_A Macrolide-specific effl 67.5 7.3 0.00025 46.3 7.2 85 1642-1726 65-152 (341)
390 4dk0_A Putative MACA; alpha-ha 67.5 7.6 0.00026 46.6 7.5 84 1642-1725 66-152 (369)
391 4dnd_A Syntaxin-10, SYN10; str 67.4 40 0.0014 33.9 11.3 93 1629-1725 31-128 (130)
392 1zww_A SH3-containing GRB2-lik 67.4 1.7E+02 0.0056 33.0 22.3 214 1505-1724 31-250 (256)
393 3okq_A BUD site selection prot 67.4 1.1E+02 0.0037 30.9 17.3 125 1658-1782 12-141 (141)
394 3efg_A Protein SLYX homolog; x 67.2 12 0.0004 34.2 6.6 53 1670-1722 10-62 (78)
395 1ses_A Seryl-tRNA synthetase; 67.2 18 0.00062 44.2 10.7 93 1640-1732 3-101 (421)
396 1du3_A Death receptor 5; trail 67.2 1.2 4E-05 45.3 0.1 77 944-1033 25-110 (130)
397 1s94_A S-syntaxin; three helix 67.2 45 0.0015 35.5 12.7 97 1627-1723 38-147 (180)
398 2ic9_A Nucleocapsid protein; h 67.1 38 0.0013 31.7 9.9 62 1655-1716 7-73 (96)
399 2dq0_A Seryl-tRNA synthetase; 67.0 20 0.00067 44.3 11.0 99 1634-1732 4-106 (455)
400 2qyw_A Vesicle transport throu 66.8 35 0.0012 32.8 10.4 80 1709-1788 15-101 (102)
401 2p26_A Integrin beta-2; hybrid 66.5 2.4 8.1E-05 48.8 2.5 49 1097-1159 207-274 (280)
402 3thf_A Protein shroom; coiled- 66.3 1.4E+02 0.0047 31.7 26.0 151 1642-1796 15-172 (190)
403 4f61_I Stathmin-like domain R4 66.1 1.6E+02 0.0055 32.4 24.7 184 1592-1779 44-234 (240)
404 3gwk_C SAG1039, putative uncha 66.1 56 0.0019 30.7 11.9 88 1690-1777 3-95 (98)
405 2qqj_A Neuropilin-2; VEGF rece 66.0 7.3 0.00025 46.0 6.7 66 97-168 189-268 (325)
406 3iv1_A Tumor susceptibility ge 65.9 77 0.0026 28.7 11.4 69 1648-1716 5-74 (78)
407 2dtg_E Insulin receptor; IR ec 65.8 3.8 0.00013 55.7 4.7 108 950-1080 183-305 (897)
408 3ltf_D Protein spitz; receptor 65.7 1.6 5.3E-05 37.6 0.6 34 1080-1118 15-55 (58)
409 3onj_A T-snare VTI1; helix, HA 65.7 47 0.0016 31.6 11.0 83 1711-1793 3-94 (97)
410 2z0v_A SH3-containing GRB2-lik 65.7 1.7E+02 0.0058 32.5 21.4 177 1590-1773 15-230 (240)
411 3nt1_A Prostaglandin-endoperox 65.1 2.2 7.6E-05 54.2 2.1 37 911-956 1-38 (587)
412 2qqm_A Neuropilin-1; VEGF rece 65.0 6.7 0.00023 48.7 6.4 67 97-169 320-394 (450)
413 1s94_A S-syntaxin; three helix 65.0 48 0.0017 35.2 12.4 107 1697-1803 38-150 (180)
414 3zbh_A ESXA; unknown function, 64.6 79 0.0027 29.5 12.7 88 1690-1777 4-96 (99)
415 3qne_A Seryl-tRNA synthetase, 64.4 15 0.00052 45.3 9.2 93 1640-1732 3-108 (485)
416 2p22_C Protein SRN2; endosome, 64.0 76 0.0026 34.1 13.4 141 1655-1796 40-182 (192)
417 2ygo_A WIF-1, WNT inhibitory f 63.8 3.6 0.00012 43.9 3.0 35 1076-1112 146-180 (188)
418 3htk_A Structural maintenance 63.8 34 0.0012 29.3 8.8 55 1658-1712 3-57 (60)
419 2z0v_A SH3-containing GRB2-lik 63.7 1.8E+02 0.0063 32.2 23.0 189 1605-1794 9-230 (240)
420 1yc9_A VCEC, multidrug resista 63.6 2.5E+02 0.0086 33.8 28.8 255 1467-1721 117-432 (442)
421 4f61_I Stathmin-like domain R4 63.6 1.8E+02 0.0061 32.0 24.3 181 1613-1797 44-231 (240)
422 1go4_E MAD1 (mitotic arrest de 63.5 47 0.0016 31.6 10.1 63 1735-1797 10-93 (100)
423 2lw1_A ABC transporter ATP-bin 63.4 34 0.0012 32.0 9.4 63 1657-1719 19-87 (89)
424 4dk0_A Putative MACA; alpha-ha 63.4 10 0.00034 45.6 7.4 87 1562-1648 66-152 (369)
425 3a7o_A Autophagy protein 16; c 63.1 49 0.0017 28.9 9.1 58 1740-1797 14-71 (75)
426 4e61_A Protein BIM1; EB1-like 62.9 1.1E+02 0.0036 29.5 12.4 82 1674-1755 4-101 (106)
427 1ykh_B RNA polymerase II holoe 62.8 15 0.00051 37.2 7.2 79 1719-1797 53-131 (132)
428 1q4g_A Prostaglandin G/H synth 62.8 2.7 9.2E-05 53.4 2.2 37 910-956 1-39 (553)
429 3lay_A Zinc resistance-associa 62.7 16 0.00056 38.7 7.8 73 1729-1801 70-142 (175)
430 4akv_A Sorting nexin-33; trans 62.5 2.6E+02 0.0088 33.5 26.2 187 1606-1797 183-382 (386)
431 3iv1_A Tumor susceptibility ge 62.1 66 0.0023 29.2 10.3 66 1719-1784 10-75 (78)
432 2lw1_A ABC transporter ATP-bin 62.1 34 0.0012 32.0 9.1 63 1650-1712 19-87 (89)
433 3hd7_A Vesicle-associated memb 62.0 50 0.0017 31.0 10.2 59 1667-1725 5-63 (91)
434 4e61_A Protein BIM1; EB1-like 62.0 79 0.0027 30.4 11.4 76 1717-1792 5-96 (106)
435 2dtg_E Insulin receptor; IR ec 61.9 5.3 0.00018 54.3 5.0 123 768-918 164-305 (897)
436 3qne_A Seryl-tRNA synthetase, 61.9 37 0.0013 41.9 11.9 86 1594-1679 16-104 (485)
437 1gs9_A Apolipoprotein E, APOE4 61.9 44 0.0015 35.1 10.9 127 1605-1733 25-160 (165)
438 3lss_A Seryl-tRNA synthetase; 61.7 28 0.00095 43.1 10.8 94 1639-1732 37-141 (484)
439 2qqo_A Neuropilin-2; VEGF rece 61.6 8.8 0.0003 47.7 6.6 67 97-169 318-398 (460)
440 3a5c_G V-type ATP synthase sub 61.5 1.5E+02 0.0051 32.7 15.7 193 1442-1640 8-203 (223)
441 2zdi_C Prefoldin subunit alpha 61.4 55 0.0019 33.8 11.6 85 1633-1717 10-141 (151)
442 1yke_B RNA polymerase II holoe 61.3 17 0.00059 37.6 7.5 77 1719-1795 53-129 (151)
443 3tkl_B LIDA protein, substrate 61.3 14 0.00047 39.2 6.6 119 1643-1765 11-133 (267)
444 3fpp_A Macrolide-specific effl 61.3 9.9 0.00034 45.1 6.7 88 1562-1649 65-152 (341)
445 1qoy_A Hemolysin E; toxin, mem 61.2 2.3E+02 0.0077 32.4 28.1 194 1602-1796 21-273 (318)
446 2qqk_A Neuropilin-2; VEGF rece 61.0 8.5 0.00029 49.4 6.5 67 97-169 437-517 (579)
447 2j1d_G DAAM1, disheveled-assoc 61.0 70 0.0024 39.8 14.5 164 1606-1769 266-447 (483)
448 1ses_A Seryl-tRNA synthetase; 60.9 11 0.00038 46.0 7.2 98 1669-1774 4-101 (421)
449 2qqm_A Neuropilin-1; VEGF rece 60.8 6.5 0.00022 48.8 5.1 66 98-169 165-237 (450)
450 1urq_A M-tomosyn isoform; tran 60.8 37 0.0013 29.6 8.3 59 1661-1719 5-63 (63)
451 3trt_A Vimentin; cytoskeleton, 60.7 63 0.0022 29.1 10.4 65 1651-1715 7-76 (77)
452 3l39_A Putative PHOU-like phos 60.4 2E+02 0.0069 31.6 21.2 182 1481-1679 30-222 (227)
453 3pik_A Cation efflux system pr 60.3 2.8E+02 0.0097 33.3 34.7 222 1570-1791 122-436 (446)
454 2j1d_G DAAM1, disheveled-assoc 60.2 3.2E+02 0.011 33.8 22.8 251 1485-1748 180-447 (483)
455 1sdd_B Coagulation factor V; c 60.2 6.9 0.00024 51.0 5.5 69 97-169 354-431 (647)
456 3rrk_A V-type ATPase 116 kDa s 59.9 34 0.0012 40.8 11.2 158 1645-1802 59-274 (357)
457 1t3j_A Mitofusin 1; coiled coi 59.7 39 0.0013 31.9 8.7 63 1705-1767 32-94 (96)
458 1n8y_C Protooncoprotein; tyros 59.6 1.7 5.9E-05 55.8 -0.4 80 943-1029 506-606 (608)
459 3d5a_X RF1, peptide chain rele 59.5 23 0.00078 41.7 8.9 86 1709-1796 3-93 (354)
460 2hr7_A Insulin receptor; hormo 59.4 1 3.5E-05 56.2 -2.4 95 1060-1176 192-305 (486)
461 2i9a_A Urokinase-type plasmino 59.3 4 0.00014 42.1 2.4 34 915-956 11-45 (145)
462 2y44_A GARP, glutamic acid/ala 59.2 1.8E+02 0.0062 30.7 21.4 156 1565-1723 2-182 (184)
463 3ni0_A Bone marrow stromal ant 59.1 1.1E+02 0.0039 28.3 13.5 78 1649-1726 14-91 (99)
464 1ci6_A Transcription factor AT 59.1 30 0.001 30.1 7.5 44 1754-1797 19-62 (63)
465 1ik9_A DNA repair protein XRCC 59.0 1.5E+02 0.0052 32.4 14.9 87 1686-1775 123-210 (213)
466 2pih_A Protein YMCA; regulate 59.0 96 0.0033 32.0 12.8 99 1577-1675 8-111 (151)
467 3ibp_A Chromosome partition pr 58.9 46 0.0016 37.7 10.8 107 1675-1781 4-120 (302)
468 1t2k_D Cyclic-AMP-dependent tr 58.7 76 0.0026 27.3 10.0 58 1738-1795 2-59 (61)
469 4fm3_A Uncharacterized hypothe 58.6 42 0.0014 31.8 8.8 67 1619-1685 30-96 (98)
470 4avm_A Bridging integrator 2; 58.5 2.2E+02 0.0077 31.5 26.9 196 1575-1770 6-233 (237)
471 1y1u_A Signal transducer and a 58.5 1.7E+02 0.0057 37.0 17.0 166 1622-1788 16-200 (585)
472 1pl5_A Regulatory protein SIR4 58.1 1.1E+02 0.0037 28.7 11.2 71 1609-1679 58-128 (142)
473 2wt7_B Transcription factor MA 58.0 81 0.0028 29.4 10.5 62 1736-1797 20-87 (90)
474 2q6q_A Spindle POLE BODY compo 57.7 37 0.0013 29.4 7.3 72 1616-1687 1-72 (74)
475 3b5n_A Synaptobrevin homolog 1 57.7 86 0.003 27.0 10.2 59 1667-1725 2-60 (61)
476 2qyw_A Vesicle transport throu 57.7 44 0.0015 32.1 9.2 77 1607-1683 22-101 (102)
477 2y3a_B Phosphatidylinositol 3- 57.7 35 0.0012 39.6 10.1 129 1652-1780 10-147 (302)
478 2xhe_B Syntaxin1; exocytosis, 57.6 1E+02 0.0035 35.2 14.3 158 1641-1798 43-243 (279)
479 3lbx_B Beta-I spectrin, spectr 57.4 1.9E+02 0.0066 30.4 22.7 138 1647-1785 5-170 (185)
480 2xu6_A MDV1 coiled coil; prote 57.4 69 0.0024 28.4 9.2 68 1656-1723 3-70 (72)
481 1lwu_C Fibrinogen gamma chain; 57.3 18 0.00063 42.1 7.7 56 1733-1788 1-56 (323)
482 1gqe_A Release factor 2, RF2; 57.1 1.2E+02 0.0042 35.7 14.6 103 1629-1732 6-117 (365)
483 1zww_A SH3-containing GRB2-lik 56.9 2.5E+02 0.0084 31.5 24.1 177 1590-1772 31-245 (256)
484 2ygo_A WIF-1, WNT inhibitory f 56.8 5.8 0.0002 42.3 3.1 35 1125-1160 146-180 (188)
485 2w6a_A ARF GTPase-activating p 56.8 66 0.0023 27.1 8.5 49 1611-1659 13-61 (63)
486 4fhq_A Tumor necrosis factor r 56.8 1.4 4.6E-05 45.0 -1.7 71 368-446 18-104 (134)
487 1ykh_B RNA polymerase II holoe 56.6 98 0.0034 31.2 12.0 101 1646-1746 3-129 (132)
488 2d4y_A HAP1, flagellar HOOK-as 56.4 1.7E+02 0.0057 36.1 16.9 136 1665-1800 7-150 (463)
489 3mov_A Lamin-B1; LMNB1, B-type 56.1 45 0.0015 31.6 8.7 76 1701-1779 11-86 (95)
490 2pms_C Pneumococcal surface pr 56.1 41 0.0014 33.2 8.6 97 1700-1800 11-124 (125)
491 1sfc_A VAMP 2, protein (synapt 55.9 71 0.0024 30.3 10.2 59 1667-1725 30-88 (96)
492 2dnx_A Syntaxin-12; snare, HAB 55.4 1.7E+02 0.0059 29.2 13.7 101 1699-1799 11-118 (130)
493 1nyh_A Regulatory protein SIR4 55.4 1.3E+02 0.0045 28.8 11.6 71 1609-1679 82-152 (166)
494 3err_A Fusion protein of micro 54.8 50 0.0017 41.6 11.6 185 1445-1641 4-210 (536)
495 1pl5_A Regulatory protein SIR4 54.8 82 0.0028 29.5 9.8 89 1610-1698 52-140 (142)
496 1n7s_A Vesicle-associated memb 54.8 99 0.0034 26.7 10.2 59 1667-1725 4-62 (63)
497 3htk_B Structural maintenance 54.7 77 0.0026 28.3 9.8 70 1639-1708 4-73 (73)
498 2p22_A Suppressor protein STP2 54.7 91 0.0031 32.9 11.6 140 1607-1746 8-159 (174)
499 2q6q_A Spindle POLE BODY compo 54.7 44 0.0015 28.9 7.3 72 1651-1722 1-72 (74)
500 2wt7_A Proto-oncogene protein 54.6 1.1E+02 0.0037 26.6 10.5 61 1737-1797 2-62 (63)
No 1
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=100.00 E-value=2.1e-105 Score=1029.22 Aligned_cols=514 Identities=57% Similarity=1.171 Sum_probs=414.6
Q ss_pred ccCCCCCCCCCCccccCCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCcccccc
Q psy2547 26 CQLPQPISSCERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVY 105 (1807)
Q Consensus 26 ~~~~~~~~~c~~~~c~p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~ 105 (1807)
++.|...++|+.++|||+|+|||+||.++|+||||||+++||+||+++|+.+.++|++||++.|+ +.++||+++|+|
T Consensus 4 ~~~~~~~~~~~~~~c~p~~~n~~~~~~~~~~~~~tCG~~~~e~~c~~~~~~~~~~c~~Cd~~~p~---~~~~hp~~~~~~ 80 (525)
T 4aqs_A 4 AQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSRDPY---HETLNPDSHLIE 80 (525)
T ss_dssp --------CGGGSCBCCCCEESSTTCGGGEECSCCTTSSSCEEEEEECSSSSCEEEEEECCSSCC---BTTTBTTCCCGG
T ss_pred ccCCccccCCCCCCcCCCchhhhcCCCCcEEEecCCCCCCCcceeccCCCCCCCcCCcCcCCCCc---ccccCChhhccc
Confidence 56667778999999999999999999999999999999999999999999888999999999654 234677776665
Q ss_pred ----ccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCCccchhhhHhhhhhhCCC
Q psy2547 106 ----ATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVYRYFAADCAKSFPG 181 (1807)
Q Consensus 106 ----~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~w~~~qy~a~~C~~~f~~ 181 (1807)
++.+. +..|||||+++.++|||||||+++||||||||+|+||||++||||||+|||+||+||||||+||+++|++
T Consensus 81 ~~~~~~~~~-~~~~wwqs~~~~~~v~itl~l~~~~~~~~v~~~f~s~rP~~~~ieks~d~g~tw~p~qy~a~~C~~~f~~ 159 (525)
T 4aqs_A 81 NVVTTFAPN-RLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPG 159 (525)
T ss_dssp GSSCC------CCCCEECCTTCCCCEEEEEEEEEEEEEEEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSTTTTSSS
T ss_pred cccccccCC-CCcccccCCCCCcCeEEEEcCCCeEEEEEEEEEEECCCCCeEEEEEecCCCCCCcceeeehhhhhhhcCC
Confidence 34332 6789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccCCCCCCCCCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeeecccccCCCccccccccc
Q psy2547 182 IPRDGLRKLTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQI 261 (1807)
Q Consensus 182 ~~~~~~~~~~~~~c~~~~s~~~p~~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~~~~~t~~~~~~~~~~~~ 261 (1807)
++..++.++++||||++||++.|+++|+|+|++|++++.+. ++||++||+|++||||||+|+|++|+++++|+.++.+
T Consensus 160 ~~~~~~~~~~~v~Ct~~~s~~~p~~~g~v~~~~~~~~~~~~--~~~s~~l~~~~~~t~iri~~~~~~~~~~~~~~~~~~~ 237 (525)
T 4aqs_A 160 ISTGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIE--DPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEI 237 (525)
T ss_dssp SCCSCCSSTTCCCEECTTCCSCSTTTCEEEEESSCSSSCCS--CTTSHHHHHHHEEEEEEEEEEECCCTTCCCTTCCHHH
T ss_pred CCCCCCCCCCcceecccCCCCCCCCCCeEEEEecCCCcccC--CCCChhhhhhhhhhhhhhheecccccccccccccccc
Confidence 99989999999999999999999999999999999988887 8899999999999999999999999999999988889
Q ss_pred cceeeEEeeceeeeeccccccCccccccCCCCCC-CCCCccccccCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCcC
Q psy2547 262 QEKYYYAITQMIVRGSCSCYGHASRCLPISEADT-KPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQTNACKQ 340 (1807)
Q Consensus 262 ~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~-~~~~~~~~C~C~hnt~G~~Ce~C~~~~~~~p~~~~~~~~~~~C~~ 340 (1807)
+++|||||+||.|+|||+|||||++|.+.++... ..++++++|.|+|||.|.+||+|.|+|++.||.+++....+.|..
T Consensus 238 ~~~~~Yai~di~v~grC~CnGHa~~C~p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~ 317 (525)
T 4aqs_A 238 REKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKK 317 (525)
T ss_dssp HTTCCCEEEEEEEEEECCCTTBCSCEECC------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCC
T ss_pred cccccEEEEeeEECeEeccCCccccCCCcCCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccc
Confidence 9999999999999999999999999998776533 456788999999999999999999999999999998888899999
Q ss_pred CCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCCCCCCCcccccCCCCCCCCCCccCCC
Q psy2547 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPY 420 (1807)
Q Consensus 341 C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~~~C~~C~C~~~gs~~~~~C~~~ 420 (1807)
|+|++|+..|.++..++...+...||+|.+|.+||.|.+|+.|.++||+++......+..|.+|.|++.+......|+..
T Consensus 318 C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~ 397 (525)
T 4aqs_A 318 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGY 397 (525)
T ss_dssp CCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCS
T ss_pred cccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCC
Confidence 99999999999999998888888899999999999999999999999999988888889999999999887766667654
Q ss_pred CCCC--cCCcccccCCCCCCCCCCcCCCCcccCCCCCCCCcccCCCCCCCCcC-CCCCCCCCCCcccCCCcCCCCcCccc
Q psy2547 421 TDDV--LVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTIN-SQGCNKDTGDCTCKRNVEGRDCNQCL 497 (1807)
Q Consensus 421 ~~~~--~~~G~C~Ck~~~~G~~Cd~C~~g~~~~~~~~~~gC~~C~C~~~Gs~~-~~~Cd~~~G~C~Ck~~v~G~~Cd~C~ 497 (1807)
.+.. ...+.|.|++++.|.+|++|++||||++..++.+|.+|.|+..|+.. +..||+.+|+|.|+++|+|.+|++|+
T Consensus 398 ~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~ 477 (525)
T 4aqs_A 398 TDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCL 477 (525)
T ss_dssp CBGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--
T ss_pred CCCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCC
Confidence 3222 34688999999999999999999999988888899999999999975 34599999999999999999999999
Q ss_pred CCccccCCcCCCCcccCCCCCCCCCCCCCcccCCcccccCCCCCCCCCC
Q psy2547 498 PHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCST 546 (1807)
Q Consensus 498 ~G~~~l~~~~~~GC~~C~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~ 546 (1807)
+|||++..+ ..+|.+|.|+++|+....|+..+|+|.|+++|+|++|++
T Consensus 478 ~G~~g~~~~-~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 478 PQHWGLSND-LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -------------------------------------------------
T ss_pred CCccCCCCC-CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 999999754 489999999999999999999999999999999999975
No 2
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.8e-90 Score=823.42 Aligned_cols=350 Identities=33% Similarity=0.662 Sum_probs=290.2
Q ss_pred CccccCCccccccCCCCceeecccCCCCCC---------ccceeecc----------cCCCccccccCCCCCCCCCCCCC
Q psy2547 37 RKSCYPATGNLLIGRENKLRASSTCGLHGN---------STFCIVSF----------LEDKKKCFTCNSSPRFDNNPAFS 97 (1807)
Q Consensus 37 ~~~c~p~~~~~~~~~~~~~~a~~tcg~~~~---------~~~c~~~~----------~~~~~~c~~c~~~~~~~~~~~~~ 97 (1807)
.++|+|+|+|||+|+ +|+||||||.++| |+||++.. +...++|++||++ +|.++
T Consensus 8 ~~~c~P~~~Nla~~~--~i~assTCG~~~~~~~~~~p~~e~yC~~~~~~~~~~~~~~~~~~~~C~~Cda~-----~p~~~ 80 (403)
T 2y38_A 8 GFSLHPPYFNLAEGA--RITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAA-----NSNKA 80 (403)
T ss_dssp CCCBCCCCEETTTTC--EEEESSCC-------------------------------------------------------
T ss_pred CCccCCcccccccCC--eeEEEeCCCCCCCCccccCCcccccceeccCCcccccccccccCCccCccCCC-----Ccccc
Confidence 468999999999886 8999999999776 99999742 2234789999999 58889
Q ss_pred CCccccccccCCCCCCccccccCCC---C--cceeEEEeccceeEEEEEEEEEc-CCCCCcEEEEEecCCCCCccchhhh
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENG---V--ENVTIQLDMEAEFHFTHLIIYFK-TFRPAAMLIERSHDFGKTWQVYRYF 171 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~---~--~~v~i~l~l~~~f~~~~~~~~f~-s~rP~~~~iers~d~g~~w~~~qy~ 171 (1807)
|||+||+|. +.|||||+++ . ++|||||||+++||||||||+|. ||||++||||||+|||+||+|||||
T Consensus 81 Hp~~~~~D~------~~twWQS~~~~~g~~~~~V~itLdL~~~f~~t~v~l~F~~spRP~~m~ierS~D~G~tW~p~qyf 154 (403)
T 2y38_A 81 HPVSNAIDG------TERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFF 154 (403)
T ss_dssp CCGGGTTSS------SSCCEECCCSTTCSSTTCCEEEEEEEEEEEEEEEEEEECSSCCCSEEEEEEESSSSSSEEEEEEE
T ss_pred CcHHHhccC------CceeeccCCccCCCccccceeEEeCCCcEEEEEEEEEecCCCCCCeEEEEeccCCCCCccceecc
Confidence 999999983 4699999974 3 38999999999999999999996 9999999999999999999999999
Q ss_pred Hh---hhhhhCCCCCCCCCCCCCcccccccCCCCCCCCCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeeecccc
Q psy2547 172 AA---DCAKSFPGIPRDGLRKLTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLH 248 (1807)
Q Consensus 172 a~---~C~~~f~~~~~~~~~~~~~~~c~~~~s~~~p~~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~~~~~ 248 (1807)
|. ||.++|++.+.+++.++++||||++||++.|+++|+|+|++|++++... +.+|||+||+|++||||||+|+|++
T Consensus 155 a~~~~dC~~~fg~~~~~~~~~~~~viCt~~ys~~~P~~~g~v~f~~l~gRP~~~-~~~~s~~lq~~~~aT~iRi~~~~~~ 233 (403)
T 2y38_A 155 ASSKRDCLERFGPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGRPGAL-NFSYSPLLRDFTKATNIRLRFLRTN 233 (403)
T ss_dssp CSSHHHHHHHTCTTTTSCCCSTTCCCEECSTTCSSSCSSCEEEEESSSSSGGGT-TGGGCHHHHHHHEEEEEEEEEEECC
T ss_pred cCCccchhhhcCCCCCCCCCCCCceeeeccCCCCcCCCCCeEEEEecCCCCCcc-cCCcCHHHHhhhccceEEEEEEecC
Confidence 97 9999999888888899999999999999999999999999998665432 1347999999999999999999999
Q ss_pred cCCCccccc---cccccceeeEEeeceeeeeccccccCccccccCCCCCCCCCCccccccCCCCCCCCCCcccccccCCC
Q psy2547 249 TLGDDLLDT---RRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDL 325 (1807)
Q Consensus 249 t~~~~~~~~---~~~~~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~~~~~~~~~C~C~hnt~G~~Ce~C~~~~~~~ 325 (1807)
|++++++.. .+.+.++|||||+||.|+|+|+|||||++|.+.+. .+++.|+|.|+|||+|.+||+|+|||++.
T Consensus 234 t~~~~l~~~~~~~~~~~~~yyyai~~~~vgg~C~CnGHA~~C~~~~~----~~~~~g~C~C~hnT~G~~CErC~pGy~g~ 309 (403)
T 2y38_A 234 TLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDP----LDPFRLQCACQHNTCGGSCDRCCPGFNQQ 309 (403)
T ss_dssp CCTTCHHHHHHTCTTTGGGCCCEEEEEEEEEECCCTTBCSCEEESCT----TSTTCEEECCCTTEESSSCCEECTTCCSS
T ss_pred cccccccccccccccccccceeecccCccccccccCCCccccCCCCC----CCccceEeECcCcCcCCCCCCCCccccCC
Confidence 999887753 46778999999999999999999999999987543 23456899999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCCcccchhhhccCCC-------ccccccCCCCCCCCCCCccccccCCcCCCCCCCCCC
Q psy2547 326 PWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGR-------ISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDP 398 (1807)
Q Consensus 326 p~~~~~~~~~~~C~~C~Cn~ha~~C~~d~~~~~~~g~-------~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~ 398 (1807)
||+|++...++.|++|+||+|++.|+||++++...+. .++|+|++|+|||+|++||+|++||||+|.+++.+|
T Consensus 310 p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~~~~~~ 389 (403)
T 2y38_A 310 PWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSP 389 (403)
T ss_dssp CCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTSCTTST
T ss_pred cccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCCCCCCC
Confidence 9999999999999999999999999999998865543 358999999999999999999999999999999999
Q ss_pred CCcccc
Q psy2547 399 EVCLRC 404 (1807)
Q Consensus 399 ~~C~~C 404 (1807)
++|+|-
T Consensus 390 ~~C~~~ 395 (403)
T 2y38_A 390 HVCRPA 395 (403)
T ss_dssp TSEECC
T ss_pred Cccccc
Confidence 999974
No 3
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=100.00 E-value=5.2e-86 Score=791.89 Aligned_cols=349 Identities=29% Similarity=0.679 Sum_probs=307.5
Q ss_pred CCCCCCC-----ccccCCccccccCCCCceeecccCCCCCCccceeecccCC-CccccccCCCCCCCCCCCCCCCccccc
Q psy2547 31 PISSCER-----KSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLED-KKKCFTCNSSPRFDNNPAFSHKIHNIV 104 (1807)
Q Consensus 31 ~~~~c~~-----~~c~p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~-~~~c~~c~~~~~~~~~~~~~h~~~~~~ 104 (1807)
..|+|++ +.|+|+|+|||+|| +|+||||||. +||+||++++... .++|++||++ +|.++||+++|+
T Consensus 5 ~~d~Cyd~~~~p~~C~P~~~N~a~~~--~i~assTCG~-~pe~yC~~~~~~~~~~~C~~Cda~-----~p~~~Hp~~~~~ 76 (375)
T 4aqt_A 5 AMDECADEGGRPQRCMPEFVNAAFNV--TVVATNTCGT-PPEEYCVQTGVTGVTKSCHLCDAG-----QQHLQHGAAFLT 76 (375)
T ss_dssp ---CCBCTTCCBCCCCCCCEETTTTC--CCEESCCTTS-SCEEEECCC----CCCCEEEECSS-----STTTCCCGGGGS
T ss_pred CCCCCcCCCCCcCccCCchhhhccCC--eeeEecCCCC-CCcCeEEecCCcccCCcCCccCCC-----ChhhhCCHhhee
Confidence 4567775 57999999999998 8999999995 7999999887654 5789999999 688999999999
Q ss_pred cccCCCCCCccccccCCCC------cceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCCccchhhhHhhhhhh
Q psy2547 105 YATVPRTKTISWWQSENGV------ENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVYRYFAADCAKS 178 (1807)
Q Consensus 105 ~~~~~~~~~~~wwqs~~~~------~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~w~~~qy~a~~C~~~ 178 (1807)
|... .++.|||||+++. ++|||||||+++|||+||||+|++|||++|+||||+|||+||+||||||.||.++
T Consensus 77 D~~~--~~~~TwWQS~~~~~~~~~~~~VtitLdL~~~f~~t~v~i~F~~~rP~~m~Iers~d~G~tw~p~qyfa~~C~~~ 154 (375)
T 4aqt_A 77 DYNN--QADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENT 154 (375)
T ss_dssp SCCC--SSSCCCEECCCGGGTCSSSCCEEEEEEEEEEEEEEEEEEEESSSCCSEEEEEEESSSSSCCEEEEEEETTHHHH
T ss_pred ccCC--CCCCceEECCCccccCCCCcceEEEEcCCCeEEEEEEEEEecCCCCCcEEEEEecCCCCCccceeeeecchhHh
Confidence 9643 3688999999864 5899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCcccccccCCCCCCCCCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeeecccccCCCccc
Q psy2547 179 FPGIPRDGL---RKLTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLL 255 (1807)
Q Consensus 179 f~~~~~~~~---~~~~~~~c~~~~s~~~p~~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~~~~~t~~~~~~ 255 (1807)
|++.+.+.+ .++++||||++||++.|+++|+|+|++|++++... +.++|++||+|++||||||+|+|++|++++++
T Consensus 155 f~~~~~~~~~~~~~~~~viCt~~ys~~~p~~~g~v~~~~l~~rp~~~-~~~~s~~lq~~~~at~iRi~l~~~~~~~~~~~ 233 (375)
T 4aqt_A 155 YSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAY-NFDNSPVLQEWVTATDIRVTLNRLNTFGDEVF 233 (375)
T ss_dssp HSCCTTCCCCTTSCTTCCEEESTTCSCCSSSCEEEEEETTTTCTTGG-GGGGCHHHHHHTEEEEEEEEEEECCCCSGGGS
T ss_pred cCCCCCCCcCCCCCCCeeEeCCcCCCCcCCcCCeEEEEeccCCCCcc-cCCcCHHHhhhhhheeeeeeecccccCccccc
Confidence 988777654 45788999999999999999999999998776553 12469999999999999999999999999988
Q ss_pred cccccccceeeEEeeceeeeeccccccCccccccCCCCCCCCCCccccccCCCCCCCCCCcccccccCCCCCCCCCCCCC
Q psy2547 256 DTRRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQT 335 (1807)
Q Consensus 256 ~~~~~~~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~~~~~~~~~C~C~hnt~G~~Ce~C~~~~~~~p~~~~~~~~~ 335 (1807)
+. +.++++|||||+||+|+|+|+|||||+.|..++. ..+.|.|+|||.|.+||+|+|||++.||++++...+
T Consensus 234 ~~-~~~~~~yyYai~di~v~g~C~Cngh~s~c~~~~~-------~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~ 305 (375)
T 4aqt_A 234 NE-PKVLKSYYYAISDFAVGGRCKCNGHASECVKNEF-------DKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESA 305 (375)
T ss_dssp CC-HHHHTTCCCEEEEEEEEEEECCTTSCSCEEECTT-------SCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCC
T ss_pred cc-ccccccceeeecccccCceecCCCCCcccCCCCC-------CCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCC
Confidence 75 6788999999999999999999999999976543 246799999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCCCCCCCccccc
Q psy2547 336 NACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCD 405 (1807)
Q Consensus 336 ~~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~~~C~~C~ 405 (1807)
+.|++|+||+|++.|+|+..++...+ .+|+|.+|++||+|.+||+|++|||+++. +..|+||.
T Consensus 306 ~~C~~C~Cn~~g~~C~~d~~~~~c~~--~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~-----~~~C~pCa 368 (375)
T 4aqt_A 306 SECLPCDCNGRSQECYFDPELYRSTG--HGGHCTNCRDNTDGAKCERCRENFFRLGN-----TEACSPAA 368 (375)
T ss_dssp CCCCCCCGGGSCSCEEECHHHHHHSS--CCEEECSCTTTEESTTSCEECSSEECCTT-----CSSCEEC-
T ss_pred CCCCCCcCcCCCCCcccccccCccCC--CCCCCCCCCCCCcCCCCCCCCcCcccCcC-----CCCCcCCc
Confidence 99999999999999999998875544 47999999999999999999999999763 46799985
No 4
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-81 Score=748.32 Aligned_cols=356 Identities=26% Similarity=0.548 Sum_probs=253.8
Q ss_pred Hhhhhccc---CCCCCCCCCCccccCCccccccCCCCcee---ecccCCCCCCccceeecccCCCccc-cccCCCCCCCC
Q psy2547 20 QVTYVTCQ---LPQPISSCERKSCYPATGNLLIGRENKLR---ASSTCGLHGNSTFCIVSFLEDKKKC-FTCNSSPRFDN 92 (1807)
Q Consensus 20 ~~~~~~~~---~~~~~~~c~~~~c~p~~~~~~~~~~~~~~---a~~tcg~~~~~~~c~~~~~~~~~~c-~~c~~~~~~~~ 92 (1807)
+..|+.|. .-.....|+.++|+|+|+|||+|+ +|. |+||||. +||+||++ ++.++| ++||++
T Consensus 27 ~~~~~~c~~~~~~~~~~~~~~~~C~P~~~n~a~~~--~v~~~~assTCG~-~pe~yC~~---~~~~~C~~~Cda~----- 95 (426)
T 3zyj_B 27 WGHYDLCKTQIYTEEGKVWDYMACQPESTDMTKYL--KVKLDPPDITCGD-PPETFCAM---GNPYMCNNECDAS----- 95 (426)
T ss_dssp ---CCCSEEECCCSSCCCEEEBCCCCCCEEGGGTC--EEEEESGGGBSCS-SCEECCCS---SCTTCCCCEECSS-----
T ss_pred hcccCccccccccCCCCcCcCccCCCcHHhHhcCC--eeeeeccCcccCC-Cccceeec---cCCCcccCcccCC-----
Confidence 45678885 334566798899999999999998 555 6999995 89999996 456899 999999
Q ss_pred CCCCCCCccccccccCCCCCCccccccCCCCc-----ceeEEEeccceeEEE-EEEEEEcCCCCCcEEEEEecCCCCCcc
Q psy2547 93 NPAFSHKIHNIVYATVPRTKTISWWQSENGVE-----NVTIQLDMEAEFHFT-HLIIYFKTFRPAAMLIERSHDFGKTWQ 166 (1807)
Q Consensus 93 ~~~~~h~~~~~~~~~~~~~~~~~wwqs~~~~~-----~v~i~l~l~~~f~~~-~~~~~f~s~rP~~~~iers~d~g~~w~ 166 (1807)
+|.++||+++|+|... .++.|||||+++.+ +|||||||+++|||| ||||+|+||||++|+||||+|||+||+
T Consensus 96 ~p~~aHp~~~~tD~~~--~~~~twWQS~~~~~~~~p~~V~itLdL~~~f~~t~~i~l~F~spRP~am~ierS~D~G~tW~ 173 (426)
T 3zyj_B 96 TPELAHPPELMFDFEG--RHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQ 173 (426)
T ss_dssp STTTCCCGGGGGSCC------CCCEEBCCCCSCSSCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCE
T ss_pred CccccCCHHHeecCCC--CCCCceecCCcccCCCCccceeEEEcCCCcEEEEEEEEeecCCCCCCeEEEEeccCCCCCce
Confidence 5888999999998642 36889999999774 799999999999999 899999999999999999999999999
Q ss_pred chhhhHhhhhhhCCCCCCC----CCCCCCcccccccCCCCCCCCCCEEEEEeCC--------CCCCCCCCCCC-----cH
Q psy2547 167 VYRYFAADCAKSFPGIPRD----GLRKLTDVYCESRYSSNNPSSGGEVILRVLP--------PSLHHSNIDPY-----SS 229 (1807)
Q Consensus 167 ~~qy~a~~C~~~f~~~~~~----~~~~~~~~~c~~~~s~~~p~~~g~v~~~~~~--------~~~~~~~~~~~-----s~ 229 (1807)
||||||.||.++|++.++. ...++++||||++||++.|+++|||+|++++ ++.++. ++| ||
T Consensus 174 p~qYfA~dC~~~Fg~~~~~~~~~~~~~~~~viCt~~yS~~~P~~~GeV~f~~~~~f~~~~gP~~~~~~--~~y~~~~~S~ 251 (426)
T 3zyj_B 174 PYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNMA--SLYGQLDTTK 251 (426)
T ss_dssp EEEEEESSHHHHTSCCCCCGGGCCSSCSSCCCEECTTTCSSSTTTTEEEECSHHHHHHHHCSSCCCHH--HHHHHHHHCH
T ss_pred ehHHHhhhhHHhcCCCcccccccCCCCCCcceeCCCCCCCCCCCCCEEEEEeccccccccCCCccccc--ccccccccCH
Confidence 9999999999999766543 3356789999999999999999999999753 233433 333 78
Q ss_pred hhhcceeeeeeeeeecccccCCCccccccccccceeeEEeeceeeeeccccccCccccccCCCCCCCCCCccccccCCCC
Q psy2547 230 DVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHN 309 (1807)
Q Consensus 230 ~l~~~~~~t~~ri~~~~~~t~~~~~~~~~~~~~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~~~~~~~~~C~C~hn 309 (1807)
+||||++||||||+|+|++|++. +.. +.++++|||||+||.|+|+|+|||||+.|.+..+ .++|.|+||
T Consensus 252 ~Lqd~~taT~iRi~l~r~~t~~~--~~~-~~~~~~yyYAI~d~~v~g~C~CnGHas~C~~~~g--------~~~C~C~~~ 320 (426)
T 3zyj_B 252 KLRDFFTVTDLRIRLLRPAVGEI--FVD-ELHLARYFYAISDIKVRGRCKCNLHATVCVYDNS--------KLTCECEHN 320 (426)
T ss_dssp HHHHHSEEEEEEEEEEECCCSSS--SCC-SSCGGGCCCEEEEEECEEEECCSSSCSCEEEETT--------EEEECCCTT
T ss_pred HHHhhhcceeEEEEEeccccCCc--ccc-ccccceecceeecccccccCcCCCchhhcCCCCC--------CceeeCCCC
Confidence 99999999999999999999874 222 5678999999999999999999999999987643 268999999
Q ss_pred CCCCCCcccccccCCCCCCCCCC-----CCCCCCcCCCCCCCCCCcccchhhhccCCCccccccCC---CCCCCCCCCcc
Q psy2547 310 TQGLNCEKCIDFYNDLPWKPAFG-----SQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDS---CEHNTEGRNCE 381 (1807)
Q Consensus 310 t~G~~Ce~C~~~~~~~p~~~~~~-----~~~~~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~---C~~nt~G~~C~ 381 (1807)
|+|++||+|.|+|++.||++++. ..+++|++|+||+|+..|.-+ . +.|.+ |++++ .|
T Consensus 321 ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~--t---------~~C~ngg~C~~~~---~C- 385 (426)
T 3zyj_B 321 TTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNE--L---------LHCQNGGTCHNNV---RC- 385 (426)
T ss_dssp EESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------------------------------
T ss_pred CcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccC--c---------ccCCCCCCcCCCC---CC-
Confidence 99999999999999999998763 578999999999999999532 1 23432 66666 99
Q ss_pred ccccCCcCCCCCCCCCCCCcccccCCCCCCCCCCccCCCCCCCcCCcccccCCCC
Q psy2547 382 RCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDVLVSGKCHCKPNV 436 (1807)
Q Consensus 382 ~C~~g~~~~~~~~~~~~~~C~~C~C~~~gs~~~~~C~~~~~~~~~~G~C~Ck~~~ 436 (1807)
.|++||++. .|..|.|++.| .|+.. +|+|.=++|+
T Consensus 386 ~C~~G~~G~---------~Ce~c~C~~~g-----~C~~~------~Gqc~~~~~~ 420 (426)
T 3zyj_B 386 LCPAAYTGI---------LCEKLRCEEAG-----SCGSD------SGQGAPPHGT 420 (426)
T ss_dssp -------------------------------------------------------
T ss_pred cCCCCCcCC---------CCcCCCCCCCC-----cccCC------CCccCCCCCc
Confidence 999999984 39999999754 59875 6998877665
No 5
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=100.00 E-value=3.1e-72 Score=650.59 Aligned_cols=275 Identities=27% Similarity=0.498 Sum_probs=236.7
Q ss_pred CCCCCCCccccCCccccccCCCCceee---cccCCCCCCccceeecccCCCccc-cccCCCCCCCCCCCCCCCccccccc
Q psy2547 31 PISSCERKSCYPATGNLLIGRENKLRA---SSTCGLHGNSTFCIVSFLEDKKKC-FTCNSSPRFDNNPAFSHKIHNIVYA 106 (1807)
Q Consensus 31 ~~~~c~~~~c~p~~~~~~~~~~~~~~a---~~tcg~~~~~~~c~~~~~~~~~~c-~~c~~~~~~~~~~~~~h~~~~~~~~ 106 (1807)
....|+.++|+|+++|||.|| +|.+ +||||. +||+||++. +..+| ++||++ +|.++||+++|+|.
T Consensus 13 ~~~~~~~~~C~P~~~nla~~~--~~~~~~~~sTCG~-~pe~yC~~~---~~~~C~~~CDa~-----~p~~aHP~~~ltD~ 81 (338)
T 3tbd_A 13 EGPTWEFYACQPKVMRLKDYV--KVKVEPSGITCGD-PPERFCSHE---NPYLCSNECDAS-----NPDLAHPPRLMFDK 81 (338)
T ss_dssp TEEEEEECCBCCCCEEGGGGC--EEEEESTTCBSCS-SCEEECCSS---CCSSCCEEECTT-----STTTCCCGGGGSSC
T ss_pred cCCcccccccCCCccchhcCe--eEEeccCCCCcCc-ChhhheecC---CcccccccccCC-----CccccCCHHHhccC
Confidence 345789999999999999998 5665 799996 899999973 45678 699999 68899999999996
Q ss_pred cCCCCCCccccccCCCC-----cceeEEEeccceeEEE-EEEEEEcCCCCCcEEEEEecCCCCCccchhhhHhhhhhhCC
Q psy2547 107 TVPRTKTISWWQSENGV-----ENVTIQLDMEAEFHFT-HLIIYFKTFRPAAMLIERSHDFGKTWQVYRYFAADCAKSFP 180 (1807)
Q Consensus 107 ~~~~~~~~~wwqs~~~~-----~~v~i~l~l~~~f~~~-~~~~~f~s~rP~~~~iers~d~g~~w~~~qy~a~~C~~~f~ 180 (1807)
.. .++.|||||+++. .+|||||||+++|+|+ ||||+|+||||++||||||+|||+||+||||||.||.++|+
T Consensus 82 ~~--~~~~TwWQS~~~~~~~~p~~VnlTL~L~k~felt~~iil~F~spRP~sm~ierS~D~G~tW~P~QYfA~dC~~~Fg 159 (338)
T 3tbd_A 82 EE--EGLATYWQSITWSRYPSPLEANITLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFG 159 (338)
T ss_dssp CC--TTCCCCEEBCCSTTTTSCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSHHHHHS
T ss_pred CC--CCCCceeccCcccCCCCCccceEEEcCCCeEEEEEEEEeecCCCCCCeEEEEeccCCCCCceeehhhhhhhHHhcC
Confidence 43 3689999999865 4799999999999999 89999999999999999999999999999999999999997
Q ss_pred CCCCC----CCCCCCcccccccCCCCCCCC-CCEEEEEeCC--------CCCCCCCCCCC-----cHhhhcceeeeeeee
Q psy2547 181 GIPRD----GLRKLTDVYCESRYSSNNPSS-GGEVILRVLP--------PSLHHSNIDPY-----SSDVQNLIKMTNLRI 242 (1807)
Q Consensus 181 ~~~~~----~~~~~~~~~c~~~~s~~~p~~-~g~v~~~~~~--------~~~~~~~~~~~-----s~~l~~~~~~t~~ri 242 (1807)
+.+.. .+.++++||||++||++.|++ +|+|+|+++. ++.+++ ++| ||+||||++||||||
T Consensus 160 ~~~~~~~~~~~~~~~eviCt~~yS~~~P~~~gg~v~f~v~~r~~~~~gP~~~~~~--~~y~~~~~s~~Lqd~~taT~iRi 237 (338)
T 3tbd_A 160 MSARRARDMSSSSAHRVLCTEEYSRWAGSKKEKHVRFEVRDRFAIFAGPDLRNMD--NLYTRLESAKGLKEFFTLTDLRM 237 (338)
T ss_dssp CCBCCGGGCCGGGTTCCCEECTTTTTTTSSCCCEEEECSHHHHHHHHTTTTCCHH--HHHHHHHHSTTHHHHTEEEEEEE
T ss_pred CCCccccCccCCCCCccEECCCCCCCCCCCCCceEEEEecccccccCCCcccccc--ccccccccCHHHHHhhhheeeee
Confidence 66543 346789999999999999955 6789998863 233443 334 689999999999999
Q ss_pred eecccccCCCccccccccccceeeEEeeceeeeeccccccCccccccCCCCCCCCCCccccccCCCCCCCCCCccccccc
Q psy2547 243 NFTKLHTLGDDLLDTRRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEKCIDFY 322 (1807)
Q Consensus 243 ~~~~~~t~~~~~~~~~~~~~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~~~~~~~~~C~C~hnt~G~~Ce~C~~~~ 322 (1807)
+|+|+++.|. +++ ..++++|||||+||.|+|||+|||||++|.++++ .++|.|+|||+|++||+|+|||
T Consensus 238 ~l~r~~~~~~-~~~--~~~~~~yyYAI~di~v~G~C~CnGHA~~C~~~~g--------~~~C~C~HnT~G~~Ce~C~p~y 306 (338)
T 3tbd_A 238 RLLRPALGGT-YVQ--RENLYKYFYAISNIEVIGRCKCNLHANLCSMREG--------SLQCECEHNTTGPDCGKCKKNF 306 (338)
T ss_dssp EEEECCCTTS-CCC--TTCGGGCCCEEEEEECEEEECCTTBCSCEEEETT--------EEEECCCTTEESTTSCEECTTC
T ss_pred EeeccccCcc-ccc--ccccceeEEEeecceeeccccccCCcCccCCCCC--------CceecCCCCCCCCCCcccCccc
Confidence 9999987654 222 2356899999999999999999999999988643 2579999999999999999999
Q ss_pred CCCCCCCCC
Q psy2547 323 NDLPWKPAF 331 (1807)
Q Consensus 323 ~~~p~~~~~ 331 (1807)
+++||+||+
T Consensus 307 ~~~pw~pg~ 315 (338)
T 3tbd_A 307 RTRSWRAGS 315 (338)
T ss_dssp BSSCCCCCB
T ss_pred cCCCCCCCC
Confidence 999999985
No 6
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.94 E-value=6.8e-28 Score=259.07 Aligned_cols=154 Identities=45% Similarity=1.110 Sum_probs=137.8
Q ss_pred CCCCCCCCCCCccCCccccCCCCCceee-ecCCCCcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCccC
Q psy2547 917 CPCPGTVESGLSYADTCQLDPRSQDVIC-ECKEGYRGTRCDGCLDNYFGNPQER---GGSCEPCDCSNNTDLALPGNCDT 992 (1807)
Q Consensus 917 c~C~~~~~~~~~~~~~C~~~~~~~~~~C-~C~~g~~G~~Ce~C~~g~~g~p~~~---~~~C~~C~C~~~~~~~~~~~C~~ 992 (1807)
|+|+++ ++|+..+.++.++| .|++||+|.+||+|++||||+|... ...|++|+|+++++++..+.|++
T Consensus 1 C~C~~~--------g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~ 72 (162)
T 1klo_A 1 CPCPGG--------SSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR 72 (162)
T ss_dssp CCSCTT--------CCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCT
T ss_pred CcCcCc--------CcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccC
Confidence 678876 78977665567899 8999999999999999999999763 25799999999988777789999
Q ss_pred CCcccccCCCCCCCCCCCcccCCCCCCccc----CCCCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCc
Q psy2547 993 LTGKCLQCRYDTEGDHCQVCKAGFFGNALE----QNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHW 1068 (1807)
Q Consensus 993 ~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~----~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~ 1068 (1807)
.||+|++|.+||+|.+|++|++||||+++. ..|++|.|++.|+.+....||+++|+|.|++||+|.+|++|++|||
T Consensus 73 ~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~ 152 (162)
T 1klo_A 73 LTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYY 152 (162)
T ss_dssp TTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCB
T ss_pred CCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcc
Confidence 999998899999999999999999999875 6799999999987654458999999999999999999999999999
Q ss_pred ccCCCCCCCC
Q psy2547 1069 KIASGTGCEP 1078 (1807)
Q Consensus 1069 ~~~~~~~C~~ 1078 (1807)
++.++.+|++
T Consensus 153 g~~~~~GC~~ 162 (162)
T 1klo_A 153 NLQSGQGCER 162 (162)
T ss_dssp CGGGSSCCBC
T ss_pred cCCCCCCcCC
Confidence 9988888874
No 7
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.94 E-value=1.2e-27 Score=307.30 Aligned_cols=237 Identities=37% Similarity=0.922 Sum_probs=144.9
Q ss_pred cCCCCCCCCCCCCC-----------CCCccCCCCCccCCCCCcCCCCcccCCCCCC----CCCCcCCCCCCCCCCCCccC
Q psy2547 866 RCICNGHADLCDSK-----------TGTCISCRNSTDGENCERCINGYYGDPRLGI----DIPCRPCPCPGTVESGLSYA 930 (1807)
Q Consensus 866 ~C~C~~~~~~Cd~~-----------tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~----~~~C~~c~C~~~~~~~~~~~ 930 (1807)
.|.||||+..|++. +|.|. |.+||+|.+||+|.+||++.|.... ...|..|.|+++ +
T Consensus 253 rC~CnGHa~~C~p~~g~~~~~~g~~~g~C~-C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~-------~ 324 (525)
T 4aqs_A 253 NCFCYGHASECAPVDGVNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH-------S 324 (525)
T ss_dssp ECCCTTBCSCEECC------CCSCCCCEEC-CCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTS-------C
T ss_pred EeccCCccccCCCcCCcccCCCCCcCcccc-CcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCC-------C
Confidence 35667777666553 46796 9999999999999999999987532 345677888754 2
Q ss_pred CccccC-------CCCCceee-ecCCCCcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCC-------CCCCccC
Q psy2547 931 DTCQLD-------PRSQDVIC-ECKEGYRGTRCDGCLDNYFGNPQER---GGSCEPCDCSNNTDLA-------LPGNCDT 992 (1807)
Q Consensus 931 ~~C~~~-------~~~~~~~C-~C~~g~~G~~Ce~C~~g~~g~p~~~---~~~C~~C~C~~~~~~~-------~~~~C~~ 992 (1807)
..|..+ .....+.| .|.+||+|.+|+.|.+|||++|... ...|.+|.|+...... ....|+.
T Consensus 325 ~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~ 404 (525)
T 4aqs_A 325 SSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGL 404 (525)
T ss_dssp SEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTB
T ss_pred CCCCCCcccccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCC
Confidence 334321 11224566 9999999999999999999998753 2346777776543211 1234455
Q ss_pred CCcccccCCCCCCCCCCCcccCCCCCCccc--CCCCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCccc
Q psy2547 993 LTGKCLQCRYDTEGDHCQVCKAGFFGNALE--QNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKI 1070 (1807)
Q Consensus 993 ~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~--~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~ 1070 (1807)
..+.| .|.+++.|.+|+.|++||||..+. ..|.+|+|++.|+......|+..+|+|.|++||+|.+|++|++|||++
T Consensus 405 ~~~~C-~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~ 483 (525)
T 4aqs_A 405 IAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGL 483 (525)
T ss_dssp CSSCC-CBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------
T ss_pred CCCcc-CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCC
Confidence 67889 499999999999999999998875 579999999999877667899999999999999999999999999997
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCc
Q psy2547 1071 AS-GTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1071 ~~-~~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~ 1112 (1807)
.. ..+|.+|+|++.|+... .|+..+|+|.|++||+|.+|++
T Consensus 484 ~~~~~~C~~C~C~~~gs~~~-~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 484 SNDLDGCRPCDCDLGGALNN-SCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -------------------------------------------
T ss_pred CCCCCCCcCCCCCCCCccCC-ccCCCCCeeECCCCCcCCCCCC
Confidence 54 36799999999998888 8999999999999999999985
No 8
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.93 E-value=1.2e-26 Score=249.24 Aligned_cols=157 Identities=33% Similarity=0.822 Sum_probs=130.7
Q ss_pred CCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCCCCCCCcccccCCCCCCCC-CCccCC
Q psy2547 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLD-DGICDP 419 (1807)
Q Consensus 341 C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~~~C~~C~C~~~gs~~-~~~C~~ 419 (1807)
|.|++|+ +|+.+. + .+.++|+.|+|||+|.+||+|++|||++|..+...+..|++|+|+..++.+ .+.|+.
T Consensus 1 C~C~~~g-~C~~~~------~-~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~ 72 (162)
T 1klo_A 1 CPCPGGS-SCAIVP------K-TKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR 72 (162)
T ss_dssp CCSCTTC-CEEECS------S-SCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCT
T ss_pred CcCcCcC-cccccC------C-CCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccC
Confidence 5677775 465322 1 135899889999999999999999999998776677899999999876543 247986
Q ss_pred CCCCCcCCcccc-cCCCCCCCCCCcCCCCcccCCCC--CCCCcccCCCCCCCCcCC-CCCCCCCCCcccCCCcCCCCcCc
Q psy2547 420 YTDDVLVSGKCH-CKPNVGGRRCDMCKDGFWNFNET--NPNGCEPCTCNIQGTINS-QGCNKDTGDCTCKRNVEGRDCNQ 495 (1807)
Q Consensus 420 ~~~~~~~~G~C~-Ck~~~~G~~Cd~C~~g~~~~~~~--~~~gC~~C~C~~~Gs~~~-~~Cd~~~G~C~Ck~~v~G~~Cd~ 495 (1807)
. +|+|. |++||+|++|++|++||||.+.. +..+|++|.|++.|+++. ..||+.+|+|.||++|+|++||+
T Consensus 73 ~------tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 73 L------TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp T------TCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCE
T ss_pred C------CCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCC
Confidence 5 69995 99999999999999999997643 235799999999999864 35999999999999999999999
Q ss_pred ccCCccccCCcCCCCccc
Q psy2547 496 CLPHFWGLSESEEYGCKP 513 (1807)
Q Consensus 496 C~~G~~~l~~~~~~GC~~ 513 (1807)
|++|||+|+.. .||+|
T Consensus 147 C~~g~~g~~~~--~GC~~ 162 (162)
T 1klo_A 147 CDPGYYNLQSG--QGCER 162 (162)
T ss_dssp ECTTCBCGGGS--SCCBC
T ss_pred CCCCcccCCCC--CCcCC
Confidence 99999999864 48865
No 9
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.70 E-value=6.7e-18 Score=208.60 Aligned_cols=175 Identities=23% Similarity=0.580 Sum_probs=129.0
Q ss_pred ceeeecCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCCCCc-ccCCCCCC
Q psy2547 941 DVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQV-CKAGFFGN 1019 (1807)
Q Consensus 941 ~~~C~C~~g~~G~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~~-C~~G~~G~ 1019 (1807)
...|.|++||.|..|+. .|.| |.++ +.|+..+|.|. |.+||+|.+|+. |.+||||.
T Consensus 184 ~~~c~C~~g~~G~~C~~--------------~C~~--C~~~------G~C~~~~g~C~-C~~G~~G~~Ce~~C~~g~~g~ 240 (423)
T 2gy5_A 184 LIVRRCEAQKWGPECNH--------------LCTA--CMNN------GVCHEDTGECI-CPPGFMGRTCEKACELHTFGR 240 (423)
T ss_dssp EEECSSCTTEESTTSCE--------------ECCC--CCTT------CEECTTTCCEE-CCTTEESTTSCEECCTTEEST
T ss_pred ccCCcCCCCCCCCCCCC--------------CCCC--CCCC------CEEECCCCcEe-CCCCccCCCcccccCCCCCCC
Confidence 35678888888888873 2333 4443 67888889996 999999999996 99999998
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccc-cCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC
Q psy2547 1020 ALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDR-CLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG 1097 (1807)
Q Consensus 1020 ~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~-C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg 1097 (1807)
.|...| .++ +.....+.|+..+++|.|++||.|.+|+. |.+||||. .|. +|+|.+.| .|+..++
T Consensus 241 ~C~~~C---~~~--~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~----~C~~~C~C~ngg-----~C~~~~~ 306 (423)
T 2gy5_A 241 TCKERC---SGQ--EGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGP----DCKLRCSCNNGE-----MCDRFQG 306 (423)
T ss_dssp TSCEEC---CST--TTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSB----TTCCBCCCTTCC-----EEETTTE
T ss_pred CcCccC---CCC--CCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCC----cccccccCCCCC-----EecCCCc
Confidence 765433 322 22222256888899999999999999997 99999964 574 68898876 8998776
Q ss_pred ccccCCCcccCCCCcC------------------CCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCcccc
Q psy2547 1098 QCQCKSGFGGRQCDQC------------------QTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGV 1156 (1807)
Q Consensus 1098 ~C~C~~g~~G~~C~~C------------------~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~ 1156 (1807)
|.|++||+|.+|+.+ .+||||. .|..+.|......+...+..+|.|.+++++.+.
T Consensus 307 -C~C~~G~~G~~Ce~~~~~~~~~~~~~~~~~~~c~~g~~g~---~C~~~~~~~~~~~~~~~~~~~G~cl~~~~~~~~ 379 (423)
T 2gy5_A 307 -CLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNP---ICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHT 379 (423)
T ss_dssp -EECCTTCBSTTSCBCSSCCCCCEECSCCSBCCEESEEECC---EEEEECTTCCCGGGEEEECTTSCEECCSEEEEC
T ss_pred -eECCCCCcCCCCccCccCCcCcceecCCCeEEeCCCccCC---cccccCCcCCCCceEEEECCCeEEEeCCCcCcc
Confidence 999999999999986 4566663 566666633222333334567777777776653
No 10
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.62 E-value=1.5e-16 Score=196.53 Aligned_cols=130 Identities=30% Similarity=0.814 Sum_probs=104.4
Q ss_pred cccCCCCCCcccCCCCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccc-cCCCCcccCCCCCCC-CCCCCCCCCCC
Q psy2547 1011 VCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDR-CLKNHWKIASGTGCE-PCDCDPIGSVD 1088 (1807)
Q Consensus 1011 ~C~~G~~G~~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~-C~~g~~~~~~~~~C~-~c~C~~~gs~~ 1088 (1807)
.|.+||||+.|...|. +|.++| .|+..+|+|.|++||.|.+|+. |.+||||. .|. +|.++..-..+
T Consensus 188 ~C~~g~~G~~C~~~C~--~C~~~G------~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~----~C~~~C~~~~~C~~~ 255 (423)
T 2gy5_A 188 RCEAQKWGPECNHLCT--ACMNNG------VCHEDTGECICPPGFMGRTCEKACELHTFGR----TCKERCSGQEGCKSY 255 (423)
T ss_dssp SSCTTEESTTSCEECC--CCCTTC------EECTTTCCEECCTTEESTTSCEECCTTEEST----TSCEECCSTTTTTTC
T ss_pred cCCCCCCCCCCCCCCC--CCCCCC------EEECCCCcEeCCCCccCCCcccccCCCCCCC----CcCccCCCCCCCCCC
Confidence 5788888887776665 455554 6888899999999999999997 99999975 353 44433322222
Q ss_pred CCCccCCCCccccCCCcccCCCCc-CCCCccCCCCCCCc-cCCCCCCCCCCCccccCCceEeccCCccccCCCcC
Q psy2547 1089 VTECNEYTGQCQCKSGFGGRQCDQ-CQTNFWGNPNVECF-PCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTC 1161 (1807)
Q Consensus 1089 ~~~C~~~tg~C~C~~g~~G~~C~~-C~~g~~g~~~~~C~-~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~C 1161 (1807)
. .|+..+++|.|++||+|..|+. |.+||||. .|. +|.|.+.| +|+..+| |.|++||+|.+|+.+
T Consensus 256 g-~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~---~C~~~C~C~ngg----~C~~~~~-C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 256 V-FCLPDPYGCSCATGWKGLQCNEACHPGFYGP---DCKLRCSCNNGE----MCDRFQG-CLCSPGWQGLQCERE 321 (423)
T ss_dssp C-EEETTTTEEECCBTCBSGGGCBCCCTTBCSB---TTCCBCCCTTCC----EEETTTE-EECCTTCBSTTSCBC
T ss_pred C-EECCCCCeEEeCCCcccccccCccCCCCcCC---cccccccCCCCC----EecCCCc-eECCCCCcCCCCccC
Confidence 3 7888899999999999999997 99999997 675 78888754 7987777 999999999999987
No 11
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.62 E-value=2.1e-16 Score=189.89 Aligned_cols=106 Identities=29% Similarity=0.677 Sum_probs=82.4
Q ss_pred CCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCC--CCCCCcccccCCCCCCCCC
Q psy2547 337 ACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEF--SDPEVCLRCDCDPGGSLDD 414 (1807)
Q Consensus 337 ~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~--~~~~~C~~C~C~~~gs~~~ 414 (1807)
...+|+|||||++|.++.. .....|+| .|+|||+|.+||+|++|||++||.+. ..++.|+||+|+..++
T Consensus 262 vgg~C~CnGHA~~C~~~~~-----~~~~~g~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~--- 332 (403)
T 2y38_A 262 IGGRCVCHGHADVCDAKDP-----LDPFRLQC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAY--- 332 (403)
T ss_dssp EEEECCCTTBCSCEEESCT-----TSTTCEEE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCS---
T ss_pred cccccccCCCccccCCCCC-----CCccceEe-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCc---
Confidence 4568999999999986531 11225789 79999999999999999999998763 4578899999997654
Q ss_pred Ccc--CCC---------CCC-CcCCcccc-cCCCCCCCCCCcCCCCcccCC
Q psy2547 415 GIC--DPY---------TDD-VLVSGKCH-CKPNVGGRRCDMCKDGFWNFN 452 (1807)
Q Consensus 415 ~~C--~~~---------~~~-~~~~G~C~-Ck~~~~G~~Cd~C~~g~~~~~ 452 (1807)
.| |+. .+. ...+|.|. |++||+|++|++|++||||.+
T Consensus 333 -~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p 382 (403)
T 2y38_A 333 -DCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 382 (403)
T ss_dssp -CEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECT
T ss_pred -ccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCC
Confidence 35 210 000 02369996 999999999999999999965
No 12
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.53 E-value=1.6e-15 Score=182.31 Aligned_cols=112 Identities=29% Similarity=0.785 Sum_probs=88.3
Q ss_pred CCCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCC--CCCCCcccccCCCCCCCC
Q psy2547 336 NACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEF--SDPEVCLRCDCDPGGSLD 413 (1807)
Q Consensus 336 ~~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~--~~~~~C~~C~C~~~gs~~ 413 (1807)
....+|+||||++.|..+.. .++.| .|+|||+|.+|++|++|||+.|+.+. ..++.|++|+|++.|+.-
T Consensus 250 ~v~g~C~Cngh~s~c~~~~~--------~~~~C-~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C 320 (375)
T 4aqt_A 250 AVGGRCKCNGHASECVKNEF--------DKLMC-NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQEC 320 (375)
T ss_dssp EEEEEECCTTSCSCEEECTT--------SCEEE-CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCE
T ss_pred ccCceecCCCCCcccCCCCC--------CCeee-eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCc
Confidence 35678999999999975542 35667 79999999999999999999998763 457789999999877531
Q ss_pred C-----CccCCCCCCCcCCcccc-cCCCCCCCCCCcCCCCcccCCCCCCCCcccCCC
Q psy2547 414 D-----GICDPYTDDVLVSGKCH-CKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTC 464 (1807)
Q Consensus 414 ~-----~~C~~~~~~~~~~G~C~-Ck~~~~G~~Cd~C~~g~~~~~~~~~~gC~~C~C 464 (1807)
. ..|+. .+|+|. ||+||+|++||+|++||||++ ++.+|+||.=
T Consensus 321 ~~d~~~~~c~~------~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~--~~~~C~pCaA 369 (375)
T 4aqt_A 321 YFDPELYRSTG------HGGHCTNCRDNTDGAKCERCRENFFRLG--NTEACSPAAA 369 (375)
T ss_dssp EECHHHHHHSS------CCEEECSCTTTEESTTSCEECSSEECCT--TCSSCEEC--
T ss_pred ccccccCccCC------CCCCCCCCCCCCcCCCCCCCCcCcccCc--CCCCCcCCcC
Confidence 1 01333 369994 999999999999999999985 4678998853
No 13
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.50 E-value=3.8e-15 Score=179.30 Aligned_cols=118 Identities=31% Similarity=0.747 Sum_probs=53.5
Q ss_pred CCCCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCC-------CCCCCcccccCC
Q psy2547 335 TNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEF-------SDPEVCLRCDCD 407 (1807)
Q Consensus 335 ~~~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~-------~~~~~C~~C~C~ 407 (1807)
...+.+|+|||||+.|..+. ++++|. |+|||+|.+||+|++|||+.|+.+. ..++.|+||+|+
T Consensus 291 ~~v~g~C~CnGHas~C~~~~---------g~~~C~-C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn 360 (426)
T 3zyj_B 291 IKVRGRCKCNLHATVCVYDN---------SKLTCE-CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISS 360 (426)
T ss_dssp EECEEEECCSSSCSCEEEET---------TEEEEC-CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-
T ss_pred ccccccCcCCCchhhcCCCC---------CCceee-CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCC
Confidence 45788999999999998653 247996 9999999999999999999998753 467889999998
Q ss_pred CCCCCCCCccCCCCCCCcCCcccc----cCCCCCCCCCCcCCCCcccCCCCCCCCcccCCCCCCCCcCCCCCCCCCCCcc
Q psy2547 408 PGGSLDDGICDPYTDDVLVSGKCH----CKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTINSQGCNKDTGDCT 483 (1807)
Q Consensus 408 ~~gs~~~~~C~~~~~~~~~~G~C~----Ck~~~~G~~Cd~C~~g~~~~~~~~~~gC~~C~C~~~Gs~~~~~Cd~~~G~C~ 483 (1807)
..|. .||.. ++.|. |+.++ +| .|+|||+|.. |+.|.|++.|+ |+..+|+|.
T Consensus 361 ~~g~----~CD~~------t~~C~ngg~C~~~~---~C-~C~~G~~G~~------Ce~c~C~~~g~-----C~~~~Gqc~ 415 (426)
T 3zyj_B 361 IGTN----VCDNE------LLHCQNGGTCHNNV---RC-LCPAAYTGIL------CEKLRCEEAGS-----CGSDSGQGA 415 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcC----ccccC------cccCCCCCCcCCCC---CC-cCCCCCcCCC------CcCCCCCCCCc-----ccCCCCccC
Confidence 7653 69876 47786 99888 99 9999999953 99999998665 999999997
Q ss_pred cCCC
Q psy2547 484 CKRN 487 (1807)
Q Consensus 484 Ck~~ 487 (1807)
=+.+
T Consensus 416 ~~~~ 419 (426)
T 3zyj_B 416 PPHG 419 (426)
T ss_dssp ----
T ss_pred CCCC
Confidence 5543
No 14
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.44 E-value=3.8e-14 Score=182.40 Aligned_cols=169 Identities=29% Similarity=0.710 Sum_probs=108.4
Q ss_pred CCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy2547 898 CINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCD 977 (1807)
Q Consensus 898 C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~C~~g~~g~p~~~~~~C~~C~ 977 (1807)
-+.||++.........|. |+|..... .+..|...+.-..++|.|++||+|.+|+ |..++|+.+.. ...|.+.+
T Consensus 407 ~p~Gf~~~~~v~~~~~C~-C~C~~~~~----~s~~Cs~~G~C~~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~-~~~C~~~~ 479 (687)
T 3k6s_B 407 RALGFTDIVTVQVLPQCE-CRCRDQSR----DRSLCHGKGFLECGICRCDTGYIGKNCE-CQTQGRSSQEL-EGSCRKDN 479 (687)
T ss_dssp CCTTCCCCCEEEEEECCC-CCCCCSSS----CSSTGGGSEEESSSSEEECSSEESTTSC-EESSSCCCSGG-GSTTSSST
T ss_pred ccccCCCceecccccccc-ccCccCCC----CCCCCCCCCEEeCCEeEcCCCCcCCccc-ccCCcCCcccc-CCCCCCCC
Confidence 345666555433334455 66665321 2344532221124689999999999999 88887765432 34577654
Q ss_pred ----CCCCCCCCCCCCccCCCcccccCC------CCCCCCCCC----cccCCCCCCcccCCCCCCcCCC--CCCCCCCCC
Q psy2547 978 ----CSNNTDLALPGNCDTLTGKCLQCR------YDTEGDHCQ----VCKAGFFGNALEQNCTECTCNI--LGIDHSKGP 1041 (1807)
Q Consensus 978 ----C~~~~~~~~~~~C~~~tG~C~~C~------~~~~G~~C~----~C~~G~~G~~~~~~C~~C~C~~--~g~~~~~~~ 1041 (1807)
|+++ |.|. .|.|. |. +||.|.+|+ .|... .| -.|.+ .| .
T Consensus 480 ~~~~Cs~~------G~C~--~G~C~-C~~~~~~~~G~~G~~Ce~~~~~C~~~-~~---------~~C~~~~~G------~ 534 (687)
T 3k6s_B 480 NSIICSGL------GDCV--CGQCL-CHTSDVPGKLIYGQYCECDTINCERY-NG---------QVCGGPGRG------L 534 (687)
T ss_dssp TSCGGGSS------EEEE--TTEEE-ECCCCSTTCCEESTTSCEESSCSCEE-TT---------EETSHHHHE------E
T ss_pred CCCcCCCC------CEEe--CCEEE-cCCCCCCCCCccccccccccccccCC-CC---------cCcCCCCCC------e
Confidence 6665 6777 57885 77 777777775 23221 01 13554 44 4
Q ss_pred CcCCCCccccCCCcccccccccCCCCcccCCCCCCCC---CCCCCCCCCCCCCccCCCCccccCCCcccCCCCcCC
Q psy2547 1042 CDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEP---CDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQ 1114 (1807)
Q Consensus 1042 C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~---c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~C~ 1114 (1807)
|+ .|+|.|++||+|..|+ |.... ..|.. ..|.+.| .|.. |+|.|++||+|.+|+.|.
T Consensus 535 C~--~g~C~C~~G~~G~~Ce-c~~~~------~~C~~~~g~~Cs~~G-----~C~~--g~C~C~~Gy~G~~Ce~c~ 594 (687)
T 3k6s_B 535 CF--CGKCRCHPGFEGSACQ-CERTT------EGCLNPRRVECSGRG-----RCRC--NVCECHSGYQLPLCQECP 594 (687)
T ss_dssp EE--TTEEEECTTCCSTTSC-SCCSS------CTTBCTTCSBTSSSC-----CBCS--SCBCCSTTCCTTTTCCCT
T ss_pred EE--CCEEEcCCCCcCCCCc-cCCCC------CCCCCCCCCCCCCCC-----cCCC--CEEECCCCCcCCCCCCCC
Confidence 65 4899999999999998 44321 23433 3677766 8875 899999999999999863
No 15
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.36 E-value=4.9e-13 Score=159.75 Aligned_cols=153 Identities=33% Similarity=0.880 Sum_probs=58.5
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG--CLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDH 1008 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~--C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~ 1008 (1807)
++|.. .+.|.|++||+|..|+. |. + .|.++ |.|.. ++.|. |.+||.|.+
T Consensus 159 G~C~~-----~~~C~C~~G~~G~~C~~~~C~---------------~-~C~~~------G~C~~-~~~C~-C~~G~~G~~ 209 (324)
T 2ygq_A 159 GFCNE-----RRICECPDGFHGPHCEKALCT---------------P-RCMNG------GLCVT-PGFCI-CPPGFYGVN 209 (324)
T ss_dssp CEECT-----TSCEECCTTEESSSSCEESSS---------------S-CCCTT------CEECS-SCCEE-CCTTCBTTT
T ss_pred CEECC-----CCeEECCCCCcCCCCCCCCCC---------------C-CCCCC------CEEcC-CCEEe-CCCCccCCC
Confidence 67753 37899999999999985 32 1 24433 45654 57884 888888888
Q ss_pred CCcccCCCCCCcccCCCCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCC
Q psy2547 1009 CQVCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVD 1088 (1807)
Q Consensus 1009 C~~C~~G~~G~~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~ 1088 (1807)
|+. ..|. -+|.+.| .|.. ++.|.|++||+|..|+. ..|. -+|.+.|
T Consensus 210 C~~-----------~~C~-~~C~~~G------~C~~-~~~C~C~~G~~G~~C~~-----------~~C~-~~C~~~g--- 255 (324)
T 2ygq_A 210 CDK-----------ANCS-TTCFNGG------TCFY-PGKCICPPGLEGEQCEI-----------SKCP-QPCRNGG--- 255 (324)
T ss_dssp TCB-----------CCCS-SCCCSSC------CBSC-SSCBCCCTTCCTTTTC---------------------------
T ss_pred ccc-----------CcCC-CCCCCCC------eeCC-CCeeeCCCCccCCCCCc-----------CcCC-CcCCCCC---
Confidence 763 2242 3566655 5755 58999999999999974 1242 3466655
Q ss_pred CCCccCCCCccccCCCcccCCCCcCCCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCccccCCCcCCCCC
Q psy2547 1089 VTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTCARGY 1165 (1807)
Q Consensus 1089 ~~~C~~~tg~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~ 1165 (1807)
.|.. +++|.|++||+|..|+. ..|.. .|... ++|.. +++|.|++||+|.+|+...+..
T Consensus 256 --~C~~-~~~C~C~~G~~G~~C~~----------~~C~~-~C~~~----g~C~~-~~~C~C~~G~~G~~C~~~~~~~ 313 (324)
T 2ygq_A 256 --KCIG-KSKCKCSKGYQGDLCSK----------PVCEP-GCGAH----GTCHE-PNKCQCQEGWHGRHCNKRYEAS 313 (324)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred --EECC-CCEEECCCCCcCCCCcC----------CCCCC-CCCCC----CEECC-CCEeECCCCCcCCCCCCCCccc
Confidence 7874 68999999999999973 02321 34443 47874 7999999999999999865443
No 16
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.31 E-value=1.1e-12 Score=169.10 Aligned_cols=130 Identities=31% Similarity=0.865 Sum_probs=90.3
Q ss_pred CCcccCCCCcccCCCCCCCCCCcCCCC--CCCcCCC----CCCCCCCCCcccCCCCcccCC------CCccCCCCCCCCC
Q psy2547 789 GGNCVCKPNVVGRRCDRCAPGTYGFGP--EGCKACD----CNHVGALDNICDVVSGQCKCR------AQTYGRECDQCSP 856 (1807)
Q Consensus 789 ~g~C~C~~~~~G~~C~~C~~g~~~~~~--~~C~~C~----C~~~g~~~~~C~~~~g~C~C~------~g~~G~~C~~C~~ 856 (1807)
.|.|.|++||+|..|+ |..++|+... ..|.+.+ |+++| .|. .|+|.|+ +||+|..|+.
T Consensus 445 ~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G----~C~--~G~C~C~~~~~~~~G~~G~~Ce~--- 514 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG----DCV--CGQCLCHTSDVPGKLIYGQYCEC--- 514 (687)
T ss_dssp SSSEEECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSE----EEE--TTEEEECCCCSTTCCEESTTSCE---
T ss_pred CCEeEcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCC----EEe--CCEEEcCCCCCCCCCcccccccc---
Confidence 5899999999999999 7777665432 1366543 77666 577 5899999 9999999982
Q ss_pred CCCCCCCCcc---CCCCC--CCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcC---CCCCCCCCCCCc
Q psy2547 857 GYWNYPTCQR---CICNG--HADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRP---CPCPGTVESGLS 928 (1807)
Q Consensus 857 g~~~~~~C~~---C~C~~--~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~---c~C~~~~~~~~~ 928 (1807)
....|.. -.|.+ |+ .|+ .|.|. |.++|+|..|+ |... ...|.. .+|.++
T Consensus 515 ---~~~~C~~~~~~~C~~~~~G-~C~--~g~C~-C~~G~~G~~Ce-c~~~---------~~~C~~~~g~~Cs~~------ 571 (687)
T 3k6s_B 515 ---DTINCERYNGQVCGGPGRG-LCF--CGKCR-CHPGFEGSACQ-CERT---------TEGCLNPRRVECSGR------ 571 (687)
T ss_dssp ---ESSCSCEETTEETSHHHHE-EEE--TTEEE-ECTTCCSTTSC-SCCS---------SCTTBCTTCSBTSSS------
T ss_pred ---ccccccCCCCcCcCCCCCC-eEE--CCEEE-cCCCCcCCCCc-cCCC---------CCCCCCCCCCCCCCC------
Confidence 1122321 12554 43 665 47896 99999999996 5421 123443 256554
Q ss_pred cCCccccCCCCCceeeecCCCCcCCCCCCCC
Q psy2547 929 YADTCQLDPRSQDVICECKEGYRGTRCDGCL 959 (1807)
Q Consensus 929 ~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~C~ 959 (1807)
++|.. +.|.|++||+|.+|+.|.
T Consensus 572 --G~C~~------g~C~C~~Gy~G~~Ce~c~ 594 (687)
T 3k6s_B 572 --GRCRC------NVCECHSGYQLPLCQECP 594 (687)
T ss_dssp --CCBCS------SCBCCSTTCCTTTTCCCT
T ss_pred --CcCCC------CEEECCCCCcCCCCCCCC
Confidence 67753 579999999999999873
No 17
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.31 E-value=1.5e-12 Score=155.62 Aligned_cols=159 Identities=30% Similarity=0.776 Sum_probs=63.0
Q ss_pred CCCCCCCCCCcccCCCCcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCC
Q psy2547 822 DCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCING 901 (1807)
Q Consensus 822 ~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G 901 (1807)
.|.++| .|.. ++.|.|++||+|..|+. +.|.+ .|.+++ .|.. ++.|. |.++|.|.+|+.
T Consensus 154 ~C~~~G----~C~~-~~~C~C~~G~~G~~C~~--------~~C~~-~C~~~G-~C~~-~~~C~-C~~G~~G~~C~~---- 212 (324)
T 2ygq_A 154 GCRNGG----FCNE-RRICECPDGFHGPHCEK--------ALCTP-RCMNGG-LCVT-PGFCI-CPPGFYGVNCDK---- 212 (324)
T ss_dssp CCCSSC----EECT-TSCEECCTTEESSSSCE--------ESSSS-CCCTTC-EECS-SCCEE-CCTTCBTTTTCB----
T ss_pred CCCCCC----EECC-CCeEECCCCCcCCCCCC--------CCCCC-CCCCCC-EEcC-CCEEe-CCCCccCCCccc----
Confidence 355555 5765 68999999999999985 23432 465543 6754 67886 888888887763
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC--CCCCCCCCCCCCCCCCCCCCCC
Q psy2547 902 YYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG--CLDNYFGNPQERGGSCEPCDCS 979 (1807)
Q Consensus 902 ~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~--C~~g~~g~p~~~~~~C~~C~C~ 979 (1807)
..|. .+|.++ ++|.. .+.|.|++||+|..|+. |. +| |.
T Consensus 213 ----------~~C~-~~C~~~--------G~C~~-----~~~C~C~~G~~G~~C~~~~C~-----~~-----------C~ 252 (324)
T 2ygq_A 213 ----------ANCS-TTCFNG--------GTCFY-----PGKCICPPGLEGEQCEISKCP-----QP-----------CR 252 (324)
T ss_dssp ----------CCCS-SCCCSS--------CCBSC-----SSCBCCCTTCCTTTTC-------------------------
T ss_pred ----------CcCC-CCCCCC--------CeeCC-----CCeeeCCCCccCCCCCcCcCC-----Cc-----------CC
Confidence 1243 356554 67853 36899999999999984 32 23 33
Q ss_pred CCCCCCCCCCccCCCcccccCCCCCCCCCCCcccCCCCCCcccCCCCCCcCCCCCCCCCCCCCcCCCCccccCCCccccc
Q psy2547 980 NNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVS 1059 (1807)
Q Consensus 980 ~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~ 1059 (1807)
++ +.|.. ++.|. |.+||.|..|+. ..|. -+|.+.| .|+. ++.|.|++||+|.+
T Consensus 253 ~~------g~C~~-~~~C~-C~~G~~G~~C~~-----------~~C~-~~C~~~g------~C~~-~~~C~C~~G~~G~~ 305 (324)
T 2ygq_A 253 NG------GKCIG-KSKCK-CSKGYQGDLCSK-----------PVCE-PGCGAHG------TCHE-PNKCQCQEGWHGRH 305 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC------CEECC-CCEEE-CCCCCcCCCCcC-----------CCCC-CCCCCCC------EECC-CCEeECCCCCcCCC
Confidence 32 34543 46774 777777777752 2343 2565554 5765 68999999999999
Q ss_pred ccccCCCCc
Q psy2547 1060 CDRCLKNHW 1068 (1807)
Q Consensus 1060 C~~C~~g~~ 1068 (1807)
|+...+..+
T Consensus 306 C~~~~~~~~ 314 (324)
T 2ygq_A 306 CNKRYEASL 314 (324)
T ss_dssp ---------
T ss_pred CCCCCcccc
Confidence 998655544
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.29 E-value=2.3e-12 Score=166.63 Aligned_cols=155 Identities=30% Similarity=0.843 Sum_probs=99.2
Q ss_pred eeeecCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCccCCCcccccCC----CCCCCCCCCccc
Q psy2547 942 VICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCD----CSNNTDLALPGNCDTLTGKCLQCR----YDTEGDHCQVCK 1013 (1807)
Q Consensus 942 ~~C~C~~g~~G~~Ce~C~~g~~g~p~~~~~~C~~C~----C~~~~~~~~~~~C~~~tG~C~~C~----~~~~G~~C~~C~ 1013 (1807)
+.|.|++||+|.+|+ |..++++.+.. ..|.+.+ |+++ |.|. .|.|. |. +||+|.+|+. .
T Consensus 458 G~C~C~~Gy~G~~Ce-~~~~~~~~~~~--~~C~~~~~~~~Cs~~------G~C~--~g~C~-C~~~~~~Gy~G~~Ce~-~ 524 (690)
T 3fcs_B 458 GVCRCGPGWLGSQCE-CSEEDYRPSQQ--DECSPREGQPVCSQR------GECL--CGQCV-CHSSDFGKITGKYCEC-D 524 (690)
T ss_dssp TEEEECTTCCSSSSC-CSCC------C--CCCSSSSSSCGGGGS------EEEC--SSSEE-ECCCSSCCCBSTTSCB-C
T ss_pred CceEeCCCccCCcee-eccCccCCccC--CcCCCCCCCCCCCCC------CEEE--CCeeE-eecCCCCCeeCCCcCc-c
Confidence 459999999999996 66666664432 3465432 6554 5676 48885 88 7788887752 0
Q ss_pred CCCCCCcccCCCCC---CcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCcccCCCCCCCC---CCCCCCCCC
Q psy2547 1014 AGFFGNALEQNCTE---CTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEP---CDCDPIGSV 1087 (1807)
Q Consensus 1014 ~G~~G~~~~~~C~~---C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~---c~C~~~gs~ 1087 (1807)
...|.. -+|.+.| .|.. |+|.|++||+|..|+ |+.. ...|.. ..|.+.|
T Consensus 525 --------~~~C~~~~~~~C~~~G------~C~~--g~C~C~~Gy~G~~Ce-C~~~------~~~C~~~~g~~C~~~G-- 579 (690)
T 3fcs_B 525 --------DFSCVRYKGEMCSGHG------QCSC--GDCLCDSDWTGYYCN-CTTR------TDTCMSSNGLLCSGRG-- 579 (690)
T ss_dssp --------SSCCCBSSSSBGGGSE------EEET--TEEEECTTEESSSSC-EECC------CTTTBCTTSSBTSSSC--
T ss_pred --------cCcCcCCCCCCCCCCC------EecC--CeeECcCCCcCCCCc-cCCC------CCcccCCCCCCCCCCC--
Confidence 022332 2455544 5755 999999999999998 4321 234543 4677766
Q ss_pred CCCCccCCCCcccc-CCCcccCCCCcCCCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCccccCCC
Q psy2547 1088 DVTECNEYTGQCQC-KSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCD 1159 (1807)
Q Consensus 1088 ~~~~C~~~tg~C~C-~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~ 1159 (1807)
.|. .|+|.| .+||+|..|+.|.. | +=.|... +.|. .|.+||+|..|+
T Consensus 580 ---~C~--~g~C~C~~~Gy~G~~Ce~C~~---------C-~~~C~~~----g~Cv------~C~~g~tG~~C~ 627 (690)
T 3fcs_B 580 ---KCE--CGSCVCIQPGSYGDTCEKCPT---------C-PDACTFK----KECV------ECKKFDRGALHD 627 (690)
T ss_dssp ---EEE--TTEEECCSTTCBSTTSCBCTT---------S-CCTTTSC----CGGG------TTTTTCCSSSSS
T ss_pred ---EEe--CCEEECCCCCccCCCcCcCCC---------C-CCCCCCC----CCcc------cCCCCCccCCCC
Confidence 886 489999 99999999998631 2 0023332 2443 299999999765
No 19
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=99.29 E-value=6.9e-08 Score=112.99 Aligned_cols=59 Identities=12% Similarity=0.168 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1738 RGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1738 r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
++..+..++..+...+......+..+...+..+..++..+..++..+..+++.+...|.
T Consensus 224 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 282 (284)
T 1c1g_A 224 EIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT 282 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334444444444444444444445555555555555555555555555555555543
No 20
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=99.27 E-value=1e-07 Score=111.59 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1760 LNETEAMFNSQESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1760 l~~Le~~i~~~e~~le~le~el~~L~~el 1788 (1807)
+..+...+..+..++..+..++..+...|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 281 (284)
T 1c1g_A 253 IDDLEDELYAQKLKYKAISEELDHALNDM 281 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333334444444444443333
No 21
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.24 E-value=1.3e-11 Score=172.23 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=16.2
Q ss_pred ccCCCCCCCC-CCEEEEEeCCCCCCCCCCCCCcHhhhc
Q psy2547 197 SRYSSNNPSS-GGEVILRVLPPSLHHSNIDPYSSDVQN 233 (1807)
Q Consensus 197 ~~~s~~~p~~-~g~v~~~~~~~~~~~~~~~~~s~~l~~ 233 (1807)
.+|....+++ -|.|-+.+ +|...+ +.|++++..
T Consensus 105 ~Ry~~~~iyT~~g~~li~v-NP~~~l---~~y~~~~~~ 138 (1184)
T 1i84_S 105 ERYFSGLIYTYSGLFCVVI-NPYKQL---PIYSEKIID 138 (1184)
T ss_dssp HHHHHTCCEEEETTEEEEE-CCCSCC---SCCSHHHHH
T ss_pred HHhcCCCcEEecCcceeee-CCCcCC---CCCCHHHHH
Confidence 3454444444 35554444 554333 357777554
No 22
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.23 E-value=9.1e-11 Score=163.67 Aligned_cols=22 Identities=18% Similarity=0.459 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1771 ESELTELSKNIAELQKRIQSCI 1792 (1807)
Q Consensus 1771 e~~le~le~el~~L~~el~~l~ 1792 (1807)
+.+++++..++..|+.+|+++.
T Consensus 1143 e~q~~~L~~ele~L~~~Ieel~ 1164 (1184)
T 1i84_S 1143 EKQKRDLSEELEALKTELEDTL 1164 (1184)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444444444444433
No 23
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.23 E-value=8.8e-12 Score=161.24 Aligned_cols=155 Identities=30% Similarity=0.834 Sum_probs=100.3
Q ss_pred CCcccCCCCcccCCCCCCCCCCcCCCC-CCCcCCC----CCCCCCCCCcccCCCCcccCC----CCccCCCCCCCCCCCC
Q psy2547 789 GGNCVCKPNVVGRRCDRCAPGTYGFGP-EGCKACD----CNHVGALDNICDVVSGQCKCR----AQTYGRECDQCSPGYW 859 (1807)
Q Consensus 789 ~g~C~C~~~~~G~~C~~C~~g~~~~~~-~~C~~C~----C~~~g~~~~~C~~~~g~C~C~----~g~~G~~C~~C~~g~~ 859 (1807)
.|.|.|++||+|..|+ |..++++... ..|...+ |.++| .|. .|+|.|+ +||+|..|+.
T Consensus 457 ~G~C~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G----~C~--~g~C~C~~~~~~Gy~G~~Ce~------ 523 (690)
T 3fcs_B 457 CGVCRCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRG----ECL--CGQCVCHSSDFGKITGKYCEC------ 523 (690)
T ss_dssp TTEEEECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSE----EEC--SSSEEECCCSSCCCBSTTSCB------
T ss_pred CCceEeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCC----EEE--CCeeEeecCCCCCeeCCCcCc------
Confidence 6789999999999995 5666655422 2354422 66665 576 5899999 9999999973
Q ss_pred CCCCCcc---CCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcC---CCCCCCCCCCCccCCcc
Q psy2547 860 NYPTCQR---CICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRP---CPCPGTVESGLSYADTC 933 (1807)
Q Consensus 860 ~~~~C~~---C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~---c~C~~~~~~~~~~~~~C 933 (1807)
....|.. -.|.+|+ .|.. |.|. |..+|+|..|+ |+. ....|.. .+|.++ ++|
T Consensus 524 ~~~~C~~~~~~~C~~~G-~C~~--g~C~-C~~Gy~G~~Ce-C~~---------~~~~C~~~~g~~C~~~--------G~C 581 (690)
T 3fcs_B 524 DDFSCVRYKGEMCSGHG-QCSC--GDCL-CDSDWTGYYCN-CTT---------RTDTCMSSNGLLCSGR--------GKC 581 (690)
T ss_dssp CSSCCCBSSSSBGGGSE-EEET--TEEE-ECTTEESSSSC-EEC---------CCTTTBCTTSSBTSSS--------CEE
T ss_pred ccCcCcCCCCCCCCCCC-EecC--CeeE-CcCCCcCCCCc-cCC---------CCCcccCCCCCCCCCC--------CEE
Confidence 1223432 2466553 6754 8886 88888888886 321 1234543 456554 678
Q ss_pred ccCCCCCceeeec-CCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCCCC
Q psy2547 934 QLDPRSQDVICEC-KEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQ 1010 (1807)
Q Consensus 934 ~~~~~~~~~~C~C-~~g~~G~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~ 1010 (1807)
.. +.|.| ++||+|.+|+.|.. | +=+|.+ .|.|+.|..+|+|..|+
T Consensus 582 ~~------g~C~C~~~Gy~G~~Ce~C~~------------C-~~~C~~-------------~g~Cv~C~~g~tG~~C~ 627 (690)
T 3fcs_B 582 EC------GSCVCIQPGSYGDTCEKCPT------------C-PDACTF-------------KKECVECKKFDRGALHD 627 (690)
T ss_dssp ET------TEEECCSTTCBSTTSCBCTT------------S-CCTTTS-------------CCGGGTTTTTCCSSSSS
T ss_pred eC------CEEECCCCCccCCCcCcCCC------------C-CCCCCC-------------CCCcccCCCCCccCCCC
Confidence 42 48999 99999999998632 1 112333 35666788888888774
No 24
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.12 E-value=1.5e-11 Score=133.35 Aligned_cols=149 Identities=30% Similarity=0.722 Sum_probs=95.5
Q ss_pred CceeeecCCCCcCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCCCCcccCCCCC
Q psy2547 940 QDVICECKEGYRGTRCDG-CLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFG 1018 (1807)
Q Consensus 940 ~~~~C~C~~g~~G~~Ce~-C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G 1018 (1807)
..+.|.|++||+|..|+. |.+. ..|.++ +.|+. +|.|. |.+||+|..|+.
T Consensus 15 ~~~~c~C~~g~~G~~C~~~C~~~--------------~~c~~~------g~C~~-~g~C~-C~~G~~G~~C~~------- 65 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNKFCRPR--------------DDFFGH------YACDQ-NGNKT-CMEGWMGPECNR------- 65 (169)
T ss_dssp ------CCTTEETTTTCEECCCE--------------EETTEE------EEECS-SCCEE-ECTTEESTTSCE-------
T ss_pred cCeeeeCCCcCcCCCcccccCCC--------------CCcCCC------CEeCC-CCeeE-CCCCCcCCCCCC-------
Confidence 357899999999999984 4321 124333 57764 78895 888888888863
Q ss_pred CcccCCCCC-CcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCC
Q psy2547 1019 NALEQNCTE-CTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG 1097 (1807)
Q Consensus 1019 ~~~~~~C~~-C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg 1097 (1807)
..|.. |.|. . +.|.. ++.|.|++||+|..|+.|... .. |.+ | +|. .++
T Consensus 66 ----~~C~~~C~~~-~------g~C~~-~~~C~C~~G~~G~~C~~C~~~-------~~-----C~~-g-----~C~-~~~ 114 (169)
T 2vj2_A 66 ----AICRQGCSPK-H------GSCKL-PGDCRCQYGWQGLYCDKCIPH-------PG-----CVH-G-----ICN-EPW 114 (169)
T ss_dssp ----ECCCTTCCTT-T------EECSS-TTCCEECTTEESSSSCEECCC-------TT-----CSS-E-----ECS-STT
T ss_pred ----CCCCCCCCCC-C------cccCC-CCeeECCCCCCCCCcccCCCC-------CC-----CCC-C-----CcC-CCC
Confidence 11221 2222 2 24655 789999999999999986532 11 322 3 676 468
Q ss_pred ccccCCCcccCCCCcCCCCccCCCCCCCcc-CCCCCCCCCCCcccc---CCceEeccCCccccCCCc
Q psy2547 1098 QCQCKSGFGGRQCDQCQTNFWGNPNVECFP-CDCDPSGSATSQCHQ---NNGTCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1098 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~-C~C~~~gs~~~~C~~---~tG~C~C~~g~~G~~C~~ 1160 (1807)
+|.|++||+|..|+.-. ..|.. ..|.+.| +|.. .+++|.|++||+|.+|+.
T Consensus 115 ~C~C~~G~~G~~C~~~~--------~~C~~~~~C~~~g----~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 115 QCLCETNWGGQLCDKDL--------NYCGTHQPCLNGG----TCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp CCEECTTEETTTTCEES--------CHHHHTCCCCTTC----EEEECSTTCEEEECCTTCCSTTSCC
T ss_pred EEeCCCCCCCCcccCCC--------CCCCCCCCCCCCC----EEcCCCCCCcEeECCCCCcCcCcCC
Confidence 99999999999998411 12321 3455544 6764 358999999999999974
No 25
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.07 E-value=2.9e-11 Score=131.09 Aligned_cols=148 Identities=28% Similarity=0.693 Sum_probs=90.8
Q ss_pred CCCcccCCCCcccCCCCC-CCCCCcCCCCCCCcCCCCCCCCCCCCcccCCCCcccCCCCccCCCCCCCCCCCCCCCCCcc
Q psy2547 788 LGGNCVCKPNVVGRRCDR-CAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQR 866 (1807)
Q Consensus 788 ~~g~C~C~~~~~G~~C~~-C~~g~~~~~~~~C~~C~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~~~~~C~~ 866 (1807)
....|.|++||+|..|+. |.+. .+|.++| .|+. +|.|.|++||+|..|+. +.|..
T Consensus 15 ~~~~c~C~~g~~G~~C~~~C~~~-----------~~c~~~g----~C~~-~g~C~C~~G~~G~~C~~--------~~C~~ 70 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNKFCRPR-----------DDFFGHY----ACDQ-NGNKTCMEGWMGPECNR--------AICRQ 70 (169)
T ss_dssp ------CCTTEETTTTCEECCCE-----------EETTEEE----EECS-SCCEEECTTEESTTSCE--------ECCCT
T ss_pred cCeeeeCCCcCcCCCcccccCCC-----------CCcCCCC----EeCC-CCeeECCCCCcCCCCCC--------CCCCC
Confidence 456899999999999974 5531 1233333 6764 89999999999999985 12321
Q ss_pred CCCC-CCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeee
Q psy2547 867 CICN-GHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICE 945 (1807)
Q Consensus 867 C~C~-~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~ 945 (1807)
.|. .|+ .|.. ++.|. |.++|.|..|+.|... + .|.+ ++|. +.++|.
T Consensus 71 -~C~~~~g-~C~~-~~~C~-C~~G~~G~~C~~C~~~--------------~-~C~~---------g~C~-----~~~~C~ 117 (169)
T 2vj2_A 71 -GCSPKHG-SCKL-PGDCR-CQYGWQGLYCDKCIPH--------------P-GCVH---------GICN-----EPWQCL 117 (169)
T ss_dssp -TCCTTTE-ECSS-TTCCE-ECTTEESSSSCEECCC--------------T-TCSS---------EECS-----STTCCE
T ss_pred -CCCCCCc-ccCC-CCeeE-CCCCCCCCCcccCCCC--------------C-CCCC---------CCcC-----CCCEEe
Confidence 233 233 4754 67885 8888888888765320 0 1322 3564 247899
Q ss_pred cCCCCcCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCccC---CCcccccCCCCCCCCCCC
Q psy2547 946 CKEGYRGTRCDGCLDNYFGNPQERGGSCEP-CDCSNNTDLALPGNCDT---LTGKCLQCRYDTEGDHCQ 1010 (1807)
Q Consensus 946 C~~g~~G~~Ce~C~~g~~g~p~~~~~~C~~-C~C~~~~~~~~~~~C~~---~tG~C~~C~~~~~G~~C~ 1010 (1807)
|++||+|..|+.-. ..|.. .+|.++ +.|.. .++.|. |.+||+|.+|+
T Consensus 118 C~~G~~G~~C~~~~-----------~~C~~~~~C~~~------g~C~~~~~~~~~C~-C~~G~~G~~Ce 168 (169)
T 2vj2_A 118 CETNWGGQLCDKDL-----------NYCGTHQPCLNG------GTCSNTGPDKYQCS-CPEGYSGPNCE 168 (169)
T ss_dssp ECTTEETTTTCEES-----------CHHHHTCCCCTT------CEEEECSTTCEEEE-CCTTCCSTTSC
T ss_pred CCCCCCCCcccCCC-----------CCCCCCCCCCCC------CEEcCCCCCCcEeE-CCCCCcCcCcC
Confidence 99999999998311 12321 334443 45643 356884 88888888886
No 26
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.47 E-value=1.7e-07 Score=98.67 Aligned_cols=53 Identities=28% Similarity=0.719 Sum_probs=41.6
Q ss_pred CCccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCC--ccccCCCcccCCCCc
Q psy2547 1046 TGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1046 tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~ 1112 (1807)
...|.|++||.|..|+. ....|..-+|.+.+ .|....| .|.|++||+|.+|+.
T Consensus 79 ~~~C~C~~G~~G~~C~~---------~i~~C~~~~C~~~~-----~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 79 GYVCKCPRGFNGIHCQH---------NINECEVEPCKNGG-----ICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp CEEEECCTTEESTTSCE---------ECCTTTTCCSCTTC-----EEEEETTEEEEECCTTCBSTTSCB
T ss_pred CeEeECcCCCcCCCccc---------CCCcCCCCCCCCCC-----EeECCCCCeEeECCCCCccCCcee
Confidence 34899999999999973 13457666777766 8876655 799999999999985
No 27
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.44 E-value=9.5e-08 Score=99.42 Aligned_cols=98 Identities=26% Similarity=0.589 Sum_probs=63.5
Q ss_pred cccCCCC--cccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCC
Q psy2547 832 ICDVVSG--QCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLG 909 (1807)
Q Consensus 832 ~C~~~~g--~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~ 909 (1807)
.|....| .|.|++||+|..|+. ....|..-+|.+++ +|.. ...++.| .|++||.|..+..
T Consensus 20 ~C~~~~g~~~C~C~~Gy~G~~C~~------~~~~C~~~~C~~~~-~C~~----------~~g~~~C-~C~~G~~G~~C~~ 81 (135)
T 2vj3_A 20 KCINTLGSFECQCLQGYTGPRCEI------DVNECVSNPCQNDA-TCLD----------QIGEFQC-ICMPGYEGVHCEV 81 (135)
T ss_dssp EEEECSSSEEEECCTTEESTTSCE------ECCTTTTCCCCSSC-EEEE----------CSSCEEE-ECCTTEESSSSCE
T ss_pred EeECCCCCEEEECCCCCcCCcccc------cCccCCCCCCCCCC-EEeC----------CCCCcee-eCCCCCcCCccee
Confidence 5766555 799999999999973 22345544555443 3433 3333444 4555555555443
Q ss_pred CCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 910 IDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 910 ~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
..+.|.+-+|.++ ++|.... +.+.|.|++||+|.+|+.
T Consensus 82 ~~~~C~~~~C~~~--------g~C~~~~--g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 82 NTDECASSPCLHN--------GRCLDKI--NEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp ECCTTTTCCSTTT--------CEEEECS--SCEEEECCTTEESSSSCE
T ss_pred cCCcccCCCcCCC--------CEeECCC--CCeEEECCCCCcCCccCc
Confidence 3466777777754 6786543 468999999999999973
No 28
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.43 E-value=2.2e-10 Score=129.78 Aligned_cols=201 Identities=12% Similarity=-0.043 Sum_probs=110.2
Q ss_pred cccCCC--CcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCC
Q psy2547 832 ICDVVS--GQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLG 909 (1807)
Q Consensus 832 ~C~~~~--g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~ 909 (1807)
.|...+ -.|.|++||+|.+|+.=..---..+.|...+|.+++ .| +.|.+|+.
T Consensus 45 ~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~ngg--------tc------~~G~~c~~------------ 98 (267)
T 4fbr_A 45 KTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGG--------VW------VLGARDKQ------------ 98 (267)
T ss_dssp SEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEE--------EE------ECCCCSSC------------
T ss_pred eecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCC--------ee------eccCcccc------------
Confidence 454433 359999999999998511000011235556665432 22 45676753
Q ss_pred CCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC----CCC--CCCCCCCCCCCCCCC-CCCCCCC
Q psy2547 910 IDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG----CLD--NYFGNPQERGGSCEP-CDCSNNT 982 (1807)
Q Consensus 910 ~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~----C~~--g~~g~p~~~~~~C~~-C~C~~~~ 982 (1807)
.+.|.+-||.++ ++|.... ..+.|.|++||+|.+|+. |.. +-+..|+.+++.|.. =.|..++
T Consensus 99 -~~eC~s~pC~ng--------G~C~~~~--~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i 167 (267)
T 4fbr_A 99 -NIVAVSIKSNDG--------GKTLTGT--TTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNV 167 (267)
T ss_dssp -CEEEEEEECSST--------TSEEEEE--EEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCE
T ss_pred -ccccCCCCCCCC--------CEEecCC--ccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceeccccccccc
Confidence 235777778776 6775432 468999999999999983 322 234445554433321 0011111
Q ss_pred CCCCCCCccCCCcccccCCCCCCCCCCCcccCCCCCCccc---------CCCCCCcCCCCCCCCCCCCCcCCCCccccCC
Q psy2547 983 DLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALE---------QNCTECTCNILGIDHSKGPCDRTTGQCPCLP 1053 (1807)
Q Consensus 983 ~~~~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~---------~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~ 1053 (1807)
+.. +..| ...|. |..++..++| .|++||.|..+. ..|...+|.+.|+ -.|-|..
T Consensus 168 ~c~-~~~c-~ngg~---C~dg~~~y~C-~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~-----------~~~~C~~ 230 (267)
T 4fbr_A 168 INV-DAKS-NDGGK---TLSGTMTYNG-EGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGF-----------WMIGARN 230 (267)
T ss_dssp EEE-EEEC-SSTTS---EEEEEEEETT-SCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEE-----------EECCCCT
T ss_pred ccC-CCCC-CCCCE---eeCCCCCeEE-eCCCCccccccccccceeccCCCccCCcccCCCe-----------EEEecCC
Confidence 000 0000 01223 4456667777 788888887664 1244445554432 1234666
Q ss_pred CcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCC--CCccccCCCcccC
Q psy2547 1054 NVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEY--TGQCQCKSGFGGR 1108 (1807)
Q Consensus 1054 g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~--tg~C~C~~g~~G~ 1108 (1807)
++.+..|+. +|.+.| +|... +..|.|++||+|+
T Consensus 231 g~n~~~c~~-----------------~c~ngG-----tC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 231 GQNVVALNV-----------------ASSDGG-----KTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp TCCEEEEEE-----------------ECSSTT-----SEEEEEEEETTSCCEEEEEE
T ss_pred CCccccCCc-----------------CCCCCC-----EeeCCCcceeecCCCCcccc
Confidence 665555542 344545 77643 4479999999985
No 29
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.42 E-value=1.8e-07 Score=97.24 Aligned_cols=101 Identities=29% Similarity=0.709 Sum_probs=69.2
Q ss_pred CcCCCCCCCCCCCCCcCCCC--ccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCC--ccccCC
Q psy2547 1028 CTCNILGIDHSKGPCDRTTG--QCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG--QCQCKS 1103 (1807)
Q Consensus 1028 C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~ 1103 (1807)
-+|.+.| .|....| .|.|++||+|..|+. ....|...+|.+.+ +|....| .|.|++
T Consensus 13 ~~C~~~g------~C~~~~g~~~C~C~~Gy~G~~C~~---------~~~~C~~~~C~~~~-----~C~~~~g~~~C~C~~ 72 (135)
T 2vj3_A 13 NPCEHAG------KCINTLGSFECQCLQGYTGPRCEI---------DVNECVSNPCQNDA-----TCLDQIGEFQCICMP 72 (135)
T ss_dssp CSSSTTC------EEEECSSSEEEECCTTEESTTSCE---------ECCTTTTCCCCSSC-----EEEECSSCEEEECCT
T ss_pred CCCCCCC------EeECCCCCEEEECCCCCcCCcccc---------cCccCCCCCCCCCC-----EEeCCCCCceeeCCC
Confidence 3565554 4665555 899999999999973 13457666777755 7876555 799999
Q ss_pred CcccCCCCcCCCCccCCCCCCCccCCCCCCCCCCCccccCC--ceEeccCCccccCCCc
Q psy2547 1104 GFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNN--GTCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1104 g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~t--G~C~C~~g~~G~~C~~ 1160 (1807)
||+|..|+.= ...|..-.|... ++|.... .+|.|++||+|..|+.
T Consensus 73 G~~G~~C~~~--------~~~C~~~~C~~~----g~C~~~~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 73 GYEGVHCEVN--------TDECASSPCLHN----GRCLDKINEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp TEESSSSCEE--------CCTTTTCCSTTT----CEEEECSSCEEEECCTTEESSSSCE
T ss_pred CCcCCcceec--------CCcccCCCcCCC----CEeECCCCCeEEECCCCCcCCccCc
Confidence 9999999730 002222234433 3676543 4899999999999963
No 30
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.38 E-value=4.1e-07 Score=95.66 Aligned_cols=109 Identities=24% Similarity=0.603 Sum_probs=73.3
Q ss_pred CCCCcCCCCCCCCCCCCCcCCC----CccccCCCcccccccc---cCCCCcccCCCCCCCCCCCCCCCCCCCCCccC---
Q psy2547 1025 CTECTCNILGIDHSKGPCDRTT----GQCPCLPNVIGVSCDR---CLKNHWKIASGTGCEPCDCDPIGSVDVTECNE--- 1094 (1807)
Q Consensus 1025 C~~C~C~~~g~~~~~~~C~~~t----G~C~C~~g~~G~~C~~---C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~--- 1094 (1807)
|.+-+|.+.| .|.... ..|.|++||+|..|+. |..+...-.....|.+-+|.+.| .|..
T Consensus 3 C~~~pC~~~g------~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g-----~C~~~~~ 71 (143)
T 4d90_A 3 CDPNPCENGG------ICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGG-----TCEISEA 71 (143)
T ss_dssp CCSCCCGGGC------EEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTC-----EEEECCC
T ss_pred CCCCcCCCCC------EeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCC-----EecCCCc
Confidence 5555676665 466533 4799999999999986 33333322234567777787766 7762
Q ss_pred ------CCCccccCCCcccCCCC----cCCCCccCCCCCCCccCCCCCCCCCCCccccCCc--eEeccCCccccCCCc
Q psy2547 1095 ------YTGQCQCKSGFGGRQCD----QCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNG--TCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1095 ------~tg~C~C~~g~~G~~C~----~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG--~C~C~~g~~G~~C~~ 1160 (1807)
....|.|++||.|..|+ .|..+ .|... ++|....| .|.|++||+|.+|..
T Consensus 72 ~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~------------~C~~~----~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 72 YRGDTFIGYVCKCPRGFNGIHCQHNINECEVE------------PCKNG----GICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EETTEECCEEEECCTTEESTTSCEECCTTTTC------------CSCTT----CEEEEETTEEEEECCTTCBSTTSCB
T ss_pred cccCCCCCeEeECcCCCcCCCcccCCCcCCCC------------CCCCC----CEeECCCCCeEeECCCCCccCCcee
Confidence 13479999999999996 25432 23333 36765544 899999999999885
No 31
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=98.26 E-value=0.0001 Score=84.89 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1633 AIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGF 1683 (1807)
Q Consensus 1633 ~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l 1683 (1807)
++.+++.++..++..+..++..+..++.++..++..+.++..+++..+.++
T Consensus 33 el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l 83 (256)
T 3na7_A 33 DLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKM 83 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444444444444444444444444444444333
No 32
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=98.23 E-value=0.0001 Score=108.88 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy2547 1660 QKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARG 1739 (1807)
Q Consensus 1660 ~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~ 1739 (1807)
.++..++.+++..++++++++.++.+++++++.++++.+++..+++.++.+++..+.++..+++.+..+..+...-...+
T Consensus 2014 ~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~ 2093 (3245)
T 3vkg_A 2014 EEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQS 2093 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHH
Confidence 44444444444444444444444444444555555555555555555555555555555555555555444444444444
Q ss_pred HHHHHHHHHH
Q psy2547 1740 QMLLNKASQL 1749 (1807)
Q Consensus 1740 ~~l~~~a~~l 1749 (1807)
+++..+.+.+
T Consensus 2094 ~~l~~~~~~L 2103 (3245)
T 3vkg_A 2094 ENFNTQMSTV 2103 (3245)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 4444444433
No 33
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.22 E-value=5e-08 Score=107.55 Aligned_cols=137 Identities=21% Similarity=0.469 Sum_probs=78.1
Q ss_pred CccccCCCCCceeeecCCCCcCC---CCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGT---RCD---GCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDT 1004 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~---~Ce---~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~ 1004 (1807)
++|.... +.+.|.|++||+|. .|+ .|+.+-..+||.+++ .|....+. ..-
T Consensus 16 g~C~~~~--g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~-----------------~C~~~~~~-----~~~ 71 (186)
T 1z1y_A 16 GQLVQMS--NHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG-----------------QCIENPDP-----AQV 71 (186)
T ss_dssp EEEEECS--SCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTE-----------------EEEECSST-----TSS
T ss_pred CEeECCC--CCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCC-----------------EeecCCCC-----cCC
Confidence 4676443 46899999999998 675 243221122332222 22211100 000
Q ss_pred CCCCCCcccCCCCCCccc---CCCCCCcCCCCCCCCCCCCCc----CCCC--ccccCCCccc-----ccccccCCCCccc
Q psy2547 1005 EGDHCQVCKAGFFGNALE---QNCTECTCNILGIDHSKGPCD----RTTG--QCPCLPNVIG-----VSCDRCLKNHWKI 1070 (1807)
Q Consensus 1005 ~G~~C~~C~~G~~G~~~~---~~C~~C~C~~~g~~~~~~~C~----~~tG--~C~C~~g~~G-----~~C~~C~~g~~~~ 1070 (1807)
.++.| .|++||.|..+. +.|..-+|.+.| .|. ...| .|.|++||.| ..|+.-
T Consensus 72 g~y~C-~C~~G~~g~~~~C~~d~C~~~~C~~~g------~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~------- 137 (186)
T 1z1y_A 72 NMYXC-GCIEGYTLXEDTCVLDVCQYXNCGESG------ECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT------- 137 (186)
T ss_dssp CSEEE-EECTTEEEETTEEEEGGGTTCCCCTTE------EEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-------
T ss_pred CCEEC-CCCCCCccCCCCCCCCcCcCCCCCCCC------EEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-------
Confidence 23344 455555554321 456655676654 465 4433 8999999999 667530
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCccCCCC--ccccCCCcccCCCCc
Q psy2547 1071 ASGTGCEPCDC-DPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1071 ~~~~~C~~c~C-~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~ 1112 (1807)
....|.. +| .+.+ .|....| .|.|++||+|..|+.
T Consensus 138 -~~~~C~~-~C~~~~~-----~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 138 -GETACQL-XCNTDNE-----VCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp -ECCCCCC-CCCTTTE-----EEEEETTEEEEEECTTCEEETTTT
T ss_pred -CCCcccc-cccccCc-----ceecCCCCeeeECCCCCccCcccc
Confidence 0134543 56 4444 7876655 699999999998876
No 34
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.22 E-value=6.9e-10 Score=125.78 Aligned_cols=137 Identities=16% Similarity=0.062 Sum_probs=78.7
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCCC------CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCccC----CCccccc
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDGC------LDNYFGNPQERGGSCEP-CDCSNNTDLALPGNCDT----LTGKCLQ 999 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~C------~~g~~g~p~~~~~~C~~-C~C~~~~~~~~~~~C~~----~tG~C~~ 999 (1807)
++|.... ..+.|.||+||+|.+|+.= .++....|+.++++|.. -.|..++ .|.+ .-|.
T Consensus 44 G~C~~g~--~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~------eC~s~pC~ngG~--- 112 (267)
T 4fbr_A 44 GKTLKGT--MTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNI------VAVSIKSNDGGK--- 112 (267)
T ss_dssp TSEEEEE--EEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCE------EEEEEECSSTTS---
T ss_pred CeecCCC--CCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCcccccc------ccCCCCCCCCCE---
Confidence 6775433 4699999999999999842 23466778877766521 0111110 1111 0122
Q ss_pred CCCCCCCCCCCcccCCCCCCcccCC---------CCCCcCCCCCCCCCCCCCcCCCCccccCCCcccccccccCCCCccc
Q psy2547 1000 CRYDTEGDHCQVCKAGFFGNALEQN---------CTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKI 1070 (1807)
Q Consensus 1000 C~~~~~G~~C~~C~~G~~G~~~~~~---------C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~ 1070 (1807)
|+.++.++.| .|++||.|..++.. |..++|.+.+ ..|.|.+|+++.
T Consensus 113 C~~~~~sy~C-~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg------------------~c~~G~~c~~~i------ 167 (267)
T 4fbr_A 113 TLTGTTTYNG-EGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGG------------------VWVLGTRGKQNV------ 167 (267)
T ss_dssp EEEEEEEETT-SCCEEEEEEECCCCEEEEEEECSSTTSCCEEEE------------------EEECCSSTTSCE------
T ss_pred EecCCccEEe-eCCCCccccCCCCCcccccccCCcCCccccCCc------------------ceeccccccccc------
Confidence 3455666666 67777777665421 4444444332 224577777521
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCC--CCccccCCCcccCCCCc
Q psy2547 1071 ASGTGCEPCDCDPIGSVDVTECNEY--TGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1071 ~~~~~C~~c~C~~~gs~~~~~C~~~--tg~C~C~~g~~G~~C~~ 1112 (1807)
.|..-+|.+.| +|... +..|.|++||.|..|+.
T Consensus 168 ----~c~~~~c~ngg-----~C~dg~~~y~C~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 168 ----INVDAKSNDGG-----KTLSGTMTYNGEGPIGFRGTLTSP 202 (267)
T ss_dssp ----EEEEEECSSTT-----SEEEEEEEETTSCCEEEEEEEEET
T ss_pred ----ccCCCCCCCCC-----EeeCCCCCeEEeCCCCcccccccc
Confidence 23344555655 67543 33688999999988863
No 35
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=98.21 E-value=0.00015 Score=83.45 Aligned_cols=16 Identities=6% Similarity=-0.016 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1610 KNTVQKIVDVLTEART 1625 (1807)
Q Consensus 1610 ~~~l~~l~~~L~~a~~ 1625 (1807)
+..+..+...+..++.
T Consensus 38 e~~~~~l~~~~~~~~~ 53 (256)
T 3na7_A 38 LNDKEAKNKAILNLEE 53 (256)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 36
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=98.13 E-value=0.0098 Score=71.53 Aligned_cols=23 Identities=4% Similarity=0.075 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhc
Q psy2547 1780 NIAELQKRIQSCINFIVDKSNNY 1802 (1807)
Q Consensus 1780 el~~L~~el~~l~~~I~~~~~~Y 1802 (1807)
++.....++..+...|.+.+..|
T Consensus 280 ~~~~~~~~l~~~a~~L~~~v~~F 302 (341)
T 3zx6_A 280 ESAAAAAALEEQASRLTEAVAVF 302 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333444444445555544443
No 37
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.12 E-value=5.3e-07 Score=100.61 Aligned_cols=97 Identities=29% Similarity=0.761 Sum_probs=65.3
Q ss_pred CCcCCCCccccCCCcccccccccCCCCcccCC-CCCCC----CCCCCCCCCCCCCCccCCCCccccCCC------cccCC
Q psy2547 1041 PCDRTTGQCPCLPNVIGVSCDRCLKNHWKIAS-GTGCE----PCDCDPIGSVDVTECNEYTGQCQCKSG------FGGRQ 1109 (1807)
Q Consensus 1041 ~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~-~~~C~----~c~C~~~gs~~~~~C~~~tg~C~C~~g------~~G~~ 1109 (1807)
.|. .|.|.|.+||+|.+|+ |..+.+..+. ...|. ...|...| .|. .|+|.|.+| |+|..
T Consensus 103 ~C~--~g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G-----~C~--~g~C~C~~gw~~~~~~~G~~ 172 (217)
T 2p28_B 103 FLE--CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG-----DCV--CGQCLCHTSDVPGKLIYGQY 172 (217)
T ss_dssp EEE--TTEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTE-----EEE--TTEEEECCCCSTTCCEESTT
T ss_pred eEE--CCEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCC-----EEe--CCceECCCCCCCcccEECCC
Confidence 465 3899999999999998 6665543210 12353 34566555 787 589999999 69999
Q ss_pred CCc----CCCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCccccCCCc
Q psy2547 1110 CDQ----CQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1110 C~~----C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~ 1160 (1807)
|+. |... .| .+ |... ..++|. .|+|.|.+||+|..|+.
T Consensus 173 Ce~~~~~C~~~-~g------~~--C~~~--~~G~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 173 CECDTINCERY-NG------QV--CGGP--GRGLCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp SCEESSCSCEE-TT------EE--TTCT--TTEEEE--TTEEEECTTEESTTSCE
T ss_pred cccCCccCCCC-CC------CC--CCCC--CCcEEe--CCeeECCCCCccCCcCC
Confidence 972 5432 11 12 3332 124786 58999999999999974
No 38
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.12 E-value=4.8e-07 Score=100.95 Aligned_cols=97 Identities=30% Similarity=0.731 Sum_probs=66.8
Q ss_pred CCccCCCcccccCCCCCCCCCCCcccCCCCCCc-----ccCCCCCCcCCCCCCCCCCCCCcCCCCccccCCC------cc
Q psy2547 988 GNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNA-----LEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPN------VI 1056 (1807)
Q Consensus 988 ~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~-----~~~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g------~~ 1056 (1807)
|.|. .|.|. |.+||.|.+|+ |+.+.++.. +...+...+|.+.| .|. .|+|.|.+| |+
T Consensus 102 G~C~--~g~C~-C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G------~C~--~g~C~C~~gw~~~~~~~ 169 (217)
T 2p28_B 102 GFLE--CGICR-CDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG------DCV--CGQCLCHTSDVPGKLIY 169 (217)
T ss_dssp EEEE--TTEEE-ECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTE------EEE--TTEEEECCCCSTTCCEE
T ss_pred ceEE--CCEEE-CCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCC------EEe--CCceECCCCCCCcccEE
Confidence 5676 38995 99999999997 877665432 22222345676655 476 489999999 69
Q ss_pred cccccccCCCCcccCCCCCCCCC---CCCCC--CCCCCCCccCCCCccccCCCcccCCCCc
Q psy2547 1057 GVSCDRCLKNHWKIASGTGCEPC---DCDPI--GSVDVTECNEYTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1057 G~~C~~C~~g~~~~~~~~~C~~c---~C~~~--gs~~~~~C~~~tg~C~C~~g~~G~~C~~ 1112 (1807)
|..|+. . ...|..- .|... | +|+ .|+|.|.+||+|..|+.
T Consensus 170 G~~Ce~-~--------~~~C~~~~g~~C~~~~~G-----~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 170 GQYCEC-D--------TINCERYNGQVCGGPGRG-----LCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp STTSCE-E--------SSCSCEETTEETTCTTTE-----EEE--TTEEEECTTEESTTSCE
T ss_pred CCCccc-C--------CccCCCCCCCCCCCCCCc-----EEe--CCeeECCCCCccCCcCC
Confidence 999972 0 1123221 35443 4 787 58999999999999974
No 39
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=98.11 E-value=0.00045 Score=102.12 Aligned_cols=11 Identities=45% Similarity=0.534 Sum_probs=5.1
Q ss_pred cceEEecCCCc
Q psy2547 658 IKRTRLPVGSR 668 (1807)
Q Consensus 658 ~~~~~l~~~~~ 668 (1807)
+-.+.|+.+.|
T Consensus 1011 NK~LtL~nGEr 1021 (3245)
T 3vkg_A 1011 NKLLTLPNGER 1021 (3245)
T ss_dssp SCEECCTTSCC
T ss_pred CCeeecCCCCe
Confidence 34445554444
No 40
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=98.05 E-value=9.9e-07 Score=103.10 Aligned_cols=49 Identities=37% Similarity=0.824 Sum_probs=42.7
Q ss_pred CCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCC
Q psy2547 337 ACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEF 395 (1807)
Q Consensus 337 ~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~ 395 (1807)
.-.+|.|||||+.|.++. | .++| .|+|||+|.+|++|+++||+.||++.
T Consensus 266 v~G~C~CnGHA~~C~~~~------g---~~~C-~C~HnT~G~~Ce~C~p~y~~~pw~pg 314 (338)
T 3tbd_A 266 VIGRCKCNLHANLCSMRE------G---SLQC-ECEHNTTGPDCGKCKKNFRTRSWRAG 314 (338)
T ss_dssp CEEEECCTTBCSCEEEET------T---EEEE-CCCTTEESTTSCEECTTCBSSCCCCC
T ss_pred eeccccccCCcCccCCCC------C---Ccee-cCCCCCCCCCCcccCccccCCCCCCC
Confidence 466899999999998753 1 3689 89999999999999999999999864
No 41
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.04 E-value=0.0063 Score=83.31 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1744 NKASQLSVNTTAKLKQLNETEAMFNSQ 1770 (1807)
Q Consensus 1744 ~~a~~l~~~~~~~~~~l~~Le~~i~~~ 1770 (1807)
+++..|.++.....+++.+|+..+...
T Consensus 1023 ~kv~~L~~e~~~L~qq~~~l~~~~~~~ 1049 (1080)
T 2dfs_A 1023 QLVSELKEQNTLLKTEKEELNRRIHDQ 1049 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444334444444444333333
No 42
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=97.88 E-value=0.0025 Score=67.98 Aligned_cols=23 Identities=26% Similarity=0.164 Sum_probs=10.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHH
Q psy2547 1603 KAGADSTKNTVQKIVDVLTEART 1625 (1807)
Q Consensus 1603 ~~ea~~l~~~l~~l~~~L~~a~~ 1625 (1807)
+..+..+...+..++..+++.+.
T Consensus 16 k~~~~~~~q~~~~le~El~EFqe 38 (189)
T 2v71_A 16 KELSMKYKQSFQEARDELVEFQE 38 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444333
No 43
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=97.85 E-value=0.059 Score=64.72 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1758 KQLNETEAMFNSQESELTELSKNIAELQKRIQSCIN 1793 (1807)
Q Consensus 1758 ~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~ 1793 (1807)
..+.++....++....+++.......|......+.+
T Consensus 262 ~~i~~i~~~~~~~~~~~~~~~~~~~~l~~~a~~L~~ 297 (341)
T 3zx6_A 262 LAVAEMDRVTQQNAALVEESAAAAAALEEQASRLTE 297 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334444444444444444444444433
No 44
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=97.84 E-value=6.3e-07 Score=98.67 Aligned_cols=125 Identities=22% Similarity=0.519 Sum_probs=76.0
Q ss_pred CCCCCCCCcccCCCCCC---ccc--CCCC----CCcCCCCCCCCCCCCCcCCC-------CccccCCCcccccccccCCC
Q psy2547 1003 DTEGDHCQVCKAGFFGN---ALE--QNCT----ECTCNILGIDHSKGPCDRTT-------GQCPCLPNVIGVSCDRCLKN 1066 (1807)
Q Consensus 1003 ~~~G~~C~~C~~G~~G~---~~~--~~C~----~C~C~~~g~~~~~~~C~~~t-------G~C~C~~g~~G~~C~~C~~g 1066 (1807)
...+++| .|++||.|. .+. +.|. .-+|.+.| .|.... ..|.|++||+|..|. |.
T Consensus 21 ~~g~~~C-~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~------~C~~~~~~~~~g~y~C~C~~G~~g~~~~-C~-- 90 (186)
T 1z1y_A 21 MSNHFXC-MCNEGLVHLSENTCEEXNECXXETLGXACGEFG------QCIENPDPAQVNMYXCGCIEGYTLXEDT-CV-- 90 (186)
T ss_dssp CSSCEEE-EECTTEEEEETTEEEECCCCSGGGTTSEEETTE------EEEECSSTTSSCSEEEEECTTEEEETTE-EE--
T ss_pred CCCCeEe-ECCCCCccCCCCccCCCCcccCCCCCCCCCCCC------EeecCCCCcCCCCEECCCCCCCccCCCC-CC--
Confidence 3344555 477777665 332 4565 45566654 466554 379999999998662 32
Q ss_pred CcccCCCCCCCCCCCCCCCCCCCCCcc----CCCC--ccccCCCccc-----CCCCcCCCCccCCCCCCCccCCC-CCCC
Q psy2547 1067 HWKIASGTGCEPCDCDPIGSVDVTECN----EYTG--QCQCKSGFGG-----RQCDQCQTNFWGNPNVECFPCDC-DPSG 1134 (1807)
Q Consensus 1067 ~~~~~~~~~C~~c~C~~~gs~~~~~C~----~~tg--~C~C~~g~~G-----~~C~~C~~g~~g~~~~~C~~C~C-~~~g 1134 (1807)
...|..-+|.+.| .|. ...| .|.|++||+| ..|+.=. ...|.. .| ..
T Consensus 91 ------~d~C~~~~C~~~g-----~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~-------~~~C~~-~C~~~-- 149 (186)
T 1z1y_A 91 ------LDVCQYXNCGESG-----ECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTG-------ETACQL-XCNTD-- 149 (186)
T ss_dssp ------EGGGTTCCCCTTE-----EEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEE-------CCCCCC-CCCTT--
T ss_pred ------CCcCcCCCCCCCC-----EEeeCCcCCCCCceEECCCCCcccCCCCCcceEcC-------CCcccc-ccccc--
Confidence 1245555677655 776 4433 7999999999 5554200 002321 23 22
Q ss_pred CCCCccccCCc--eEeccCCccccCCCc
Q psy2547 1135 SATSQCHQNNG--TCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1135 s~~~~C~~~tG--~C~C~~g~~G~~C~~ 1160 (1807)
.++|....| +|.|++||+|..|..
T Consensus 150 --~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 150 --NEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp --TEEEEEETTEEEEEECTTCEEETTTT
T ss_pred --CcceecCCCCeeeECCCCCccCcccc
Confidence 236765444 799999999988875
No 45
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=97.80 E-value=7.3e-05 Score=77.33 Aligned_cols=132 Identities=16% Similarity=0.147 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1647 DLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLL 1726 (1807)
Q Consensus 1647 ~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~ 1726 (1807)
++..++..+..+..+|..++...++....+..++........++..+..+++.++..++++..+++++..++..++..+.
T Consensus 11 eLer~eerl~~a~~kLeeaek~adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLe 90 (147)
T 2b9c_A 11 ELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLE 90 (147)
T ss_dssp CCGGGGTTTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33333344444444444444444444444455555555555556666666666666666666666666666665555554
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1727 SKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQ 1785 (1807)
Q Consensus 1727 ~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~ 1785 (1807)
... .++.....++..|..++......|+.|+..-.+..++-+.++.+|..|.
T Consensus 91 rae-------eRae~aE~k~~eLEeeL~~~~~nlKsLE~~eekas~rE~~yee~I~~L~ 142 (147)
T 2b9c_A 91 RAE-------ERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVARLK 142 (147)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTSC
T ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 444 3444444444444444445555555555555555556666666665554
No 46
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.73 E-value=1e-05 Score=77.69 Aligned_cols=84 Identities=25% Similarity=0.362 Sum_probs=53.0
Q ss_pred CcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCC-CCCCCCcC
Q psy2547 838 GQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRL-GIDIPCRP 916 (1807)
Q Consensus 838 g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~-~~~~~C~~ 916 (1807)
-.|.|++||+|..|+. ..|..-+ |.++..+..| .|++||. .+. ...+.|.+
T Consensus 2 y~C~C~~g~~g~~c~~--------~~c~~~p-----------------C~n~~~~y~C-~C~~G~~--~C~~~~~~~C~~ 53 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQQ--------HQSWLRP-----------------VLRSNRVEYC-WCNSGRA--QCHSVPVKSCSE 53 (91)
T ss_dssp CCCCCBCSSSCCBCCS--------SCEEEEE-----------------CSSSSCEEEE-ECSSSCC--BCCEECEEECSS
T ss_pred eeeECCCCCcCCeECC--------CcccCCc-----------------cccCCCCcEe-ECCCCCc--ccccCcCCcccC
Confidence 3689999999988753 2332212 2233334444 4555554 222 12356888
Q ss_pred CCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 917 CPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 917 c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
-||.++ ++|......+.+.|.|++||+|.+|+.
T Consensus 54 ~pC~ng--------g~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 54 PRCFNG--------GTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp CCSCTT--------CEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred CCCCCC--------CEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 888876 688754322468999999999999984
No 47
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=97.72 E-value=0.006 Score=63.30 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1735 KRARGQMLLNKASQLS 1750 (1807)
Q Consensus 1735 ~~~r~~~l~~~a~~l~ 1750 (1807)
+..++..|..+++.+.
T Consensus 95 lq~ri~~L~~El~~~k 110 (168)
T 3o0z_A 95 LQARITSLQEEVKHLK 110 (168)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333344444443333
No 48
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=97.67 E-value=6.8e-05 Score=79.92 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=67.1
Q ss_pred CCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCccccccCC
Q psy2547 42 PATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQSEN 121 (1807)
Q Consensus 42 p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs~~ 121 (1807)
|...|||.|+ +++|+|+=+ .+++++++|+ +..|+|.|..
T Consensus 24 ~~~~NLA~~k--~ataSs~~~----------------------------------~~~a~~AvDG-----n~~T~W~s~~ 62 (161)
T 4a3z_A 24 ANYVNIAENK--NVSGSNSQS----------------------------------GNPLSNITDG-----DLSSLWISDN 62 (161)
T ss_dssp --CCBTTTTC--CEEESCBCT----------------------------------TCCGGGGSSS-----CTTCCEEBGG
T ss_pred CCcccccCCC--ceEEeCCcC----------------------------------CCChhhcCcC-----CCCCeEEcCC
Confidence 5678999886 678877422 2346689985 5679999987
Q ss_pred CCcceeEEEeccceeEEEEEEEEEcC-CCCCcEEEEEecCCCCCccch
Q psy2547 122 GVENVTIQLDMEAEFHFTHLIIYFKT-FRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 122 ~~~~v~i~l~l~~~f~~~~~~~~f~s-~rP~~~~iers~d~g~~w~~~ 168 (1807)
...+-.|+|||++.+.|..|.|.|.. .++..+.||=|.| |.+|++.
T Consensus 63 ~~~~~Wi~VDLg~~~~v~~v~i~~~~~~~~~~y~IevS~D-g~~W~~v 109 (161)
T 4a3z_A 63 GAMPANATIDLEGNNFVDFLELHFEKEGFRFQFKVEVEDE-SGNRETV 109 (161)
T ss_dssp GCSSEEEEEEEEEEEEEEEEEEECSSTTCCEEEEEEEECT-TCCEEEE
T ss_pred CCCCeEEEEECCCcEEEeEEEEEECCCCceEEEEEEEEcC-CCCEEEE
Confidence 66778999999999999999999964 4678899999988 8999764
No 49
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=97.63 E-value=0.042 Score=69.29 Aligned_cols=28 Identities=14% Similarity=0.084 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy2547 1773 ELTELSKNIAELQKRIQSCINFIVDKSN 1800 (1807)
Q Consensus 1773 ~le~le~el~~L~~el~~l~~~I~~~~~ 1800 (1807)
.++.+...-..|...+......|+.++.
T Consensus 446 ~~~~l~~~W~~L~~~~~~~~~~lE~~i~ 473 (476)
T 1hci_A 446 TMEHIRVGWELLLTTIARTINEVETQIL 473 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666667777777777777777766653
No 50
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=97.60 E-value=0.059 Score=67.97 Aligned_cols=14 Identities=7% Similarity=0.145 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHh
Q psy2547 1519 ASTSNITKQLDEFL 1532 (1807)
Q Consensus 1519 ~~~~~l~~~lk~~l 1532 (1807)
..+..++......+
T Consensus 141 ~~~~~Wl~e~e~~l 154 (476)
T 1hci_A 141 STHETWAYGKEQIL 154 (476)
T ss_dssp HHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33444444444444
No 51
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=97.58 E-value=0.00063 Score=70.36 Aligned_cols=107 Identities=12% Similarity=0.184 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1641 ISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQE 1720 (1807)
Q Consensus 1641 i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~ 1720 (1807)
.++..+.+..+++....-+.++..++.+|+++....++...++.++..++..+...++.+..+++.++..+.+|...+..
T Consensus 33 adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~ 112 (147)
T 2b9c_A 33 ADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKT 112 (147)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444445555556666666666666666666666666666667777777777777777777777777776
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy2547 1721 TDNKLLSKAESSGLKRARGQMLLNKAS 1747 (1807)
Q Consensus 1721 ~~~~l~~~~~~l~~~~~r~~~l~~~a~ 1747 (1807)
+.+.+..+...-.....+-..+..+++
T Consensus 113 ~~~nlKsLE~~eekas~rE~~yee~I~ 139 (147)
T 2b9c_A 113 VTNNLKSLEDKVEELLSKNYHLENEVA 139 (147)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHhHHHHHHHHHHHHHHHH
Confidence 666666554444444444444444433
No 52
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=97.57 E-value=0.23 Score=58.17 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDAQQKSNETNVKVKL 1671 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~ 1671 (1807)
..|.+.+.+|..+.+.+..+...|..++++|.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (602)
T 1cii_A 226 RAISEARNKLSSVTESLNTARNALTRAEQQLTQ 258 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455555555555555555555555555544
No 53
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=97.55 E-value=0.24 Score=57.92 Aligned_cols=51 Identities=24% Similarity=0.319 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1633 AIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGF 1683 (1807)
Q Consensus 1633 ~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l 1683 (1807)
++..++..+..++..++....+...++..++.+.+....+++.+..++.++
T Consensus 364 EItsaeSaInslqaqvSa~t~e~k~A~d~l~a~~kek~~~~n~~a~~~~Ki 414 (602)
T 1cii_A 364 KITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKI 414 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHH
Confidence 333333333333333333334444444444444433333444444444443
No 54
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=97.49 E-value=0.035 Score=53.62 Aligned_cols=138 Identities=13% Similarity=0.192 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAK 1638 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~ 1638 (1807)
++++.+..++.+....|+-+-..+.+ ...+..+|.++-..-++++..+..++..++..++.+...+.....+..+-.
T Consensus 18 ~D~~s~~~eleEnqeEL~iVgkML~E---EqgKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lkrn~~qQnQQS 94 (167)
T 4gkw_A 18 QDTESLQKQLEENQEELEIVGNMLRE---EQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQS 94 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhHHHhHhh
Confidence 44555555555555555444444433 333466666666666667777777777777777666665544443333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKE 1703 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~ 1703 (1807)
-+++ ++.+++..+++...-.+.+...|.-++++++.-+-++.+....++.++.+-+.++.+
T Consensus 95 lDiR----KLrELEADLKEKDsMVe~LT~TiG~LrKELEdEklK~~E~MdSFE~LkvENE~vker 155 (167)
T 4gkw_A 95 LDMR----KLGELEADLKEKDSMVESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEK 155 (167)
T ss_dssp HHHH----HTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHH----HHHHHHhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHH
Confidence 2222 344566666666666667777777777777666666666655555555554444444
No 55
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.49 E-value=6.8e-05 Score=95.81 Aligned_cols=109 Identities=26% Similarity=0.581 Sum_probs=64.0
Q ss_pred CCCcCCCCCCCCCCCCccCCccccCCCCCceee-ecCCCCcC--CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy2547 912 IPCRPCPCPGTVESGLSYADTCQLDPRSQDVIC-ECKEGYRG--TRCD---GCLDNYFGNPQERGGSCEPCDCSNNTDLA 985 (1807)
Q Consensus 912 ~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C-~C~~g~~G--~~Ce---~C~~g~~g~p~~~~~~C~~C~C~~~~~~~ 985 (1807)
+.|.+-||..+ ++|..... +.+.| .|++||+| ..|+ .|+.+ |
T Consensus 4 DeC~~nPC~~g--------g~C~n~~~-Gsy~C~~C~~GytGdg~~CeDiDEC~~~----p------------------- 51 (634)
T 1yo8_A 4 DGCLSNPCFPG--------AQCSSFPD-GSWSCGFCPVGFLGNGTHCEDLDECALV----P------------------- 51 (634)
T ss_dssp CGGGGCCSCTT--------CCEEECTT-SCEEECCCCTTBCSCSSSCCBCCTTTTS----C-------------------
T ss_pred cccCCCCCCCC--------CEEecCCC-CCeECCcCCCccCCCCCCccccccccCC----C-------------------
Confidence 45777777765 57865432 34899 99999998 7786 23321 1
Q ss_pred CCCCccCCCcccccCCCCCCCCCCCcccCCCCCCccc-----------------CCCCC--CcCCCCCCCCCCCCCcCCC
Q psy2547 986 LPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALE-----------------QNCTE--CTCNILGIDHSKGPCDRTT 1046 (1807)
Q Consensus 986 ~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~-----------------~~C~~--C~C~~~g~~~~~~~C~~~t 1046 (1807)
+.|....+.+ .|.....|++|..|++||.|..+. ..|.. -+|.+.+ .|....
T Consensus 52 --~~C~~gg~~~-~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~------~Cvnt~ 122 (634)
T 1yo8_A 52 --DICFSTSKVP-RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHA------ECIYLG 122 (634)
T ss_dssp --CCSCCCSSSC-CEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTE------EEEECC
T ss_pred --CcccCCcccc-ceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCc------cccccc
Confidence 1122111111 144445566665577777766532 34542 2565543 465544
Q ss_pred ----C--ccccCCCccc--cccc
Q psy2547 1047 ----G--QCPCLPNVIG--VSCD 1061 (1807)
Q Consensus 1047 ----G--~C~C~~g~~G--~~C~ 1061 (1807)
| .|.|++||.| ..|+
T Consensus 123 ~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 123 HFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp TTCSSSEEEEECTTEEESSSSEE
T ss_pred cccccceeeeccCCccccCcccc
Confidence 3 8999999998 7886
No 56
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.43 E-value=0.00016 Score=92.45 Aligned_cols=129 Identities=26% Similarity=0.579 Sum_probs=72.0
Q ss_pred cccCCC-C--cc-cCCCCccC--CCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccC
Q psy2547 832 ICDVVS-G--QC-KCRAQTYG--RECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGD 905 (1807)
Q Consensus 832 ~C~~~~-g--~C-~C~~g~~G--~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~ 905 (1807)
.|.... | .| .|++||+| ..|+. ...|..-+ ..|....+.+ .|.....|++|..|++||.|.
T Consensus 16 ~C~n~~~Gsy~C~~C~~GytGdg~~CeD-------iDEC~~~p-----~~C~~gg~~~-~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 16 QCSSFPDGSWSCGFCPVGFLGNGTHCED-------LDECALVP-----DICFSTSKVP-RCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp CEEECTTSCEEECCCCTTBCSCSSSCCB-------CCTTTTSC-----CCSCCCSSSC-CEEECSSSEEECCCCTTEEEC
T ss_pred EEecCCCCCeECCcCCCccCCCCCCccc-------cccccCCC-----CcccCCcccc-ceeeccCceecccCCCCcccC
Confidence 576544 3 69 99999998 67752 12332222 1122211111 255566678885689999888
Q ss_pred CCCC--------------CCCCCcC--CCCCCCCCCCCccCCccccCC--CCCceeeecCCCCcC--CCCCC--CCCCC-
Q psy2547 906 PRLG--------------IDIPCRP--CPCPGTVESGLSYADTCQLDP--RSQDVICECKEGYRG--TRCDG--CLDNY- 962 (1807)
Q Consensus 906 ~~~~--------------~~~~C~~--c~C~~~~~~~~~~~~~C~~~~--~~~~~~C~C~~g~~G--~~Ce~--C~~g~- 962 (1807)
.+.+ ....|.. -+|..+ ++|.... ..+.+.|.|++||+| ..|+. -..++
T Consensus 83 ~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~--------~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~ 154 (634)
T 1yo8_A 83 QPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKH--------AECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWP 154 (634)
T ss_dssp CCEESSSHHHHSCCCCEEECCTTTTTCCCCCTT--------EEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSC
T ss_pred ccccccccccccCCCcccccccccCCCcccccC--------ccccccccccccceeeeccCCccccCcccccccCccccc
Confidence 7541 1344542 355543 5786543 125699999999998 78962 11111
Q ss_pred -CCCCCCC--CCCCCCCCCCCC
Q psy2547 963 -FGNPQER--GGSCEPCDCSNN 981 (1807)
Q Consensus 963 -~g~p~~~--~~~C~~C~C~~~ 981 (1807)
-..+|.. +-.|..+.|...
T Consensus 155 ~~~~~C~~~~~y~C~~dnC~~~ 176 (634)
T 1yo8_A 155 NLNLVCATNATYHCIKDNCPHL 176 (634)
T ss_dssp SSCCTTTTTCSSSCSCCSSTTS
T ss_pred CCCCcccCCCCccccccccccc
Confidence 1233331 235666667653
No 57
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.41 E-value=6.2e-05 Score=72.15 Aligned_cols=51 Identities=27% Similarity=0.668 Sum_probs=37.8
Q ss_pred CccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCC----CCccccCCCcccCCCCc
Q psy2547 1047 GQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEY----TGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1047 G~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~----tg~C~C~~g~~G~~C~~ 1112 (1807)
..|.|++||. .|+. .....|.+-+|.+.| +|... ...|.|++||+|.+|+.
T Consensus 32 y~C~C~~G~~--~C~~--------~~~~~C~~~pC~ngg-----~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 32 EYCWCNSGRA--QCHS--------VPVKSCSEPRCFNGG-----TCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp EEEECSSSCC--BCCE--------ECEEECSSCCSCTTC-----EEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred cEeECCCCCc--cccc--------CcCCcccCCCCCCCC-----EeecCCCCCCeEeECCCCCcCCcCCc
Confidence 4799999998 6751 013457777788876 78753 34799999999999974
No 58
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=97.38 E-value=0.3 Score=57.98 Aligned_cols=14 Identities=0% Similarity=0.034 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHhh
Q psy2547 1520 STSNITKQLDEFLN 1533 (1807)
Q Consensus 1520 ~~~~l~~~lk~~l~ 1533 (1807)
++..++......+.
T Consensus 15 el~~Wl~e~~~~l~ 28 (326)
T 3kbt_A 15 EAEAWIGEQELYVI 28 (326)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhc
Confidence 34444444444443
No 59
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=97.38 E-value=0.48 Score=57.24 Aligned_cols=48 Identities=10% Similarity=0.134 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1739 GQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQK 1786 (1807)
Q Consensus 1739 ~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~ 1786 (1807)
+.+|..--..+...+...+.++..-..-.++...-+.+..++|..+..
T Consensus 324 ~~~L~~~Y~~f~~aY~~lL~Ev~RRr~~~~~~~~i~~~~~~~L~~l~e 371 (413)
T 4hpq_C 324 TRNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQINT 371 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333343333332222223333333334444444433
No 60
>3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C
Probab=97.32 E-value=0.31 Score=53.89 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHHH
Q psy2547 1778 SKNIAELQKRIQSC 1791 (1807)
Q Consensus 1778 e~el~~L~~el~~l 1791 (1807)
...+.+....+..+
T Consensus 192 ~~~~~e~s~~i~~i 205 (213)
T 3g67_A 192 KESLSEKSAEIDSA 205 (213)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 61
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=97.30 E-value=0.025 Score=77.07 Aligned_cols=15 Identities=13% Similarity=0.162 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHhh
Q psy2547 1519 ASTSNITKQLDEFLN 1533 (1807)
Q Consensus 1519 ~~~~~l~~~lk~~l~ 1533 (1807)
.++..++......+.
T Consensus 380 ~~~~~Wl~~~e~~l~ 394 (863)
T 1sjj_A 380 SIHESWTDGKEAMLQ 394 (863)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 344445554444444
No 62
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=97.27 E-value=0.00093 Score=88.05 Aligned_cols=84 Identities=14% Similarity=0.220 Sum_probs=65.9
Q ss_pred CCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCccccccCC
Q psy2547 42 PATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQSEN 121 (1807)
Q Consensus 42 p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs~~ 121 (1807)
+.-.|||.|+ +++|||+=+ .|++++++|+ +..|+|.|.
T Consensus 22 ~~~~NLA~gk--~vTASS~~~----------------------------------g~~p~nAvDG-----n~~T~WsS~- 59 (914)
T 4a4a_A 22 ASGVEITEGV--TVTAKGNTE----------------------------------GNTADLAIDG-----DLSTYWESS- 59 (914)
T ss_dssp --CCBCCSSC--EEEESCCCT----------------------------------TCCGGGGSSS-----CTTCCEECC-
T ss_pred CccccccCCC--ceEEeccCC----------------------------------CCcHHHeECC-----CCCCeEecC-
Confidence 4567888876 788887421 3566788885 567999998
Q ss_pred CCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCCccchh
Q psy2547 122 GVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 122 ~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~w~~~q 169 (1807)
...-.|++||++.+.|+.|.|+-...+..+..|+-|.| |++|+++.
T Consensus 60 -~~~qWLqVDLG~~~~V~~V~l~~~~~~v~~Y~Ie~S~D-G~~Wt~v~ 105 (914)
T 4a4a_A 60 -NDYKWIEVDLGGIYELSKIEIFNKDEAVYKYNIYASED-GENFNKIA 105 (914)
T ss_dssp -SSCCEEEEEEEEEEEEEEEEEECSSSSCEEEEEEEESS-SSCCEEEE
T ss_pred -CCCceEEEECCCeEEEEEEEEEecCCceEEEEEEEEcC-CCCeEEEE
Confidence 45678999999999999999975556678999999999 99998864
No 63
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=97.25 E-value=0.084 Score=60.75 Aligned_cols=23 Identities=9% Similarity=0.021 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcC
Q psy2547 1781 IAELQKRIQSCINFIVDKSNNYK 1803 (1807)
Q Consensus 1781 l~~L~~el~~l~~~I~~~~~~Y~ 1803 (1807)
+..++..+.....+|+.++.-|.
T Consensus 229 ~e~~~~~l~~~~e~l~~~l~~~~ 251 (273)
T 3s84_A 229 GENFNKALVQQMEQLRQKLGPHA 251 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHHHHhCcch
Confidence 44555566666666766665553
No 64
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=97.23 E-value=0.39 Score=56.91 Aligned_cols=22 Identities=14% Similarity=0.321 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q psy2547 1777 LSKNIAELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1777 le~el~~L~~el~~l~~~I~~~ 1798 (1807)
+...+..|..+...+.....++
T Consensus 296 i~~~l~~L~~~w~~l~~~w~~R 317 (323)
T 3edv_A 296 IKEKLLQLTEKRKEMIDKWEDR 317 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444
No 65
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=97.23 E-value=0.31 Score=56.03 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhh
Q psy2547 1783 ELQKRIQSCINFIVDKSN 1800 (1807)
Q Consensus 1783 ~L~~el~~l~~~I~~~~~ 1800 (1807)
.++..+.-+..+|+.+++
T Consensus 253 ~~~~~~~~~~~d~~~~~~ 270 (273)
T 3s84_A 253 DVEGHLSFLEKDLRDKVN 270 (273)
T ss_dssp ------------------
T ss_pred hHHhhhhHHHHHHHHHhh
Confidence 334444555555555554
No 66
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=97.21 E-value=0.16 Score=67.00 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1608 STKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAAR 1645 (1807)
Q Consensus 1608 ~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~ 1645 (1807)
.+..++++.+..|++|.+.-..+.+.++.....|+.+.
T Consensus 493 ~l~~~~~~~~~~l~~A~~sD~~v~~~~~~~~~~l~~L~ 530 (704)
T 2xs1_A 493 PLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLC 530 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhC
Confidence 45666666677776666666666666655555554443
No 67
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=97.20 E-value=0.6 Score=55.37 Aligned_cols=27 Identities=4% Similarity=0.035 Sum_probs=13.1
Q ss_pred HHHHHHHHHHhhHhhhhhHHHHHHHHH
Q psy2547 1424 SNSAKDYAETSKKLINEKESKAEELRK 1450 (1807)
Q Consensus 1424 a~~A~~~a~~l~~~i~e~~~~~eeL~~ 1450 (1807)
+...+..-+.+...+..+...++.|..
T Consensus 39 ~~~ll~kh~~~~~el~~~~~~v~~l~~ 65 (326)
T 3kbt_A 39 AIVMLKRHLRQQRAVEDYGRNIKQLAS 65 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444544555555555555444
No 68
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.18 E-value=5.7e-05 Score=94.76 Aligned_cols=53 Identities=42% Similarity=0.933 Sum_probs=18.6
Q ss_pred CCcCCCCccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCc
Q psy2547 1041 PCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1041 ~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~ 1112 (1807)
.|.. ++.|.|++||+|..|+. ..|.+ +|.+.| +|... +.|.|++||+|..|+.
T Consensus 403 ~C~~-~~~C~C~~G~~G~~C~~-----------~~C~~-~C~~~g-----~C~~~-~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 403 YCTP-TGKCCCSPGWEGDFCRT-----------AKCEP-ACRHGG-----VCVRP-NKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp EECT-TSCEEECTTEESTTSCE-----------ECC------------------------------------
T ss_pred ccCC-CCeECCCCCcCCCcCCc-----------CcCCC-CCCCCC-----EECCC-CEEECCCCcccCCCCC
Confidence 4654 46999999999999974 24655 787766 88753 7999999999999985
No 69
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=97.15 E-value=0.0023 Score=83.57 Aligned_cols=15 Identities=13% Similarity=0.244 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1772 SELTELSKNIAELQK 1786 (1807)
Q Consensus 1772 ~~le~le~el~~L~~ 1786 (1807)
++++.+.+++++|++
T Consensus 565 ~e~~~~~~~~~~l~~ 579 (597)
T 3oja_B 565 QETSLKRQKVKQLEA 579 (597)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 70
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=97.13 E-value=0.49 Score=55.57 Aligned_cols=20 Identities=10% Similarity=0.130 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQN 1686 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~ 1686 (1807)
..+.+....++..+..+...
T Consensus 123 k~~~~~~~~l~KaKk~Y~~~ 142 (301)
T 2efk_A 123 QQLENGFKQLENSKRKFERD 142 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 71
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=97.13 E-value=0.73 Score=54.49 Aligned_cols=22 Identities=5% Similarity=0.215 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q psy2547 1777 LSKNIAELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1777 le~el~~L~~el~~l~~~I~~~ 1798 (1807)
+...+..+.++...+.....++
T Consensus 292 i~~~~~~l~~rw~~l~~~~~~R 313 (322)
T 1u4q_A 292 ITAKMKGLKGKVSDLEKAAAQR 313 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444433
No 72
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=97.13 E-value=0.84 Score=55.16 Aligned_cols=13 Identities=15% Similarity=0.179 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHhh
Q psy2547 1368 KALQRLNEKITSL 1380 (1807)
Q Consensus 1368 ~~L~~L~~kL~~l 1380 (1807)
..+..++.++.-+
T Consensus 50 Fl~~~l~~Q~~~L 62 (413)
T 4hpq_C 50 FVLDCIQQQTKFL 62 (413)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344455554444
No 73
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.09 E-value=0.00012 Score=76.64 Aligned_cols=96 Identities=20% Similarity=0.466 Sum_probs=54.9
Q ss_pred cccCCCCcccCCCCccCC---------CCCCCCCCCCCCCCCccC---CCCCCCCCCCCCCCCccCCCCCccCCCCCcCC
Q psy2547 832 ICDVVSGQCKCRAQTYGR---------ECDQCSPGYWNYPTCQRC---ICNGHADLCDSKTGTCISCRNSTDGENCERCI 899 (1807)
Q Consensus 832 ~C~~~~g~C~C~~g~~G~---------~C~~C~~g~~~~~~C~~C---~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~ 899 (1807)
.|.. +..|.|++||+|. .|+. ...|..- +|..++ . |.....++.| .|+
T Consensus 14 ~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~d-------ideC~~~~~~~C~~~~-~----------C~n~~g~y~C-~C~ 73 (143)
T 2bou_A 14 SCVN-ATACRCNPGFSSFSEIITTPMETCDD-------INECATLSKVSCGKFS-D----------CWNTEGSYDC-VCS 73 (143)
T ss_dssp EESS-SSCEEECTTEECSSSSBCSTTCCCEE-------CCGGGC----CCCTTE-E----------EEECSSCEEE-EEC
T ss_pred EEcC-CCEEeCCCCCcCccccccCCCCcCCc-------cccccCCCCCCCCCCC-E----------EEcCCCCeEe-ECC
Confidence 5655 4789999999984 4521 1233321 333222 2 3333445566 566
Q ss_pred CCcccCCCCC-----------CCCCCc--CCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 900 NGYYGDPRLG-----------IDIPCR--PCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 900 ~G~~G~~~~~-----------~~~~C~--~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
+||.|.+... ..+.|. +-+|..+ ++|.... +.+.|.|++||+|..+..
T Consensus 74 ~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~--------~~C~n~~--g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 74 PGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSS--------TVCFNTV--GSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp TTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTT--------SEEEECS--SCEEEECCSSSCBCTTCC
T ss_pred CCcccCcCccccccCCCCCcCCccCccCcCCCCCCC--------CEEECCC--CCEEeeCCCCcccCCCCc
Confidence 6766653210 123454 2455543 5786543 468999999999988763
No 74
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=97.07 E-value=0.84 Score=53.97 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1772 SELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1772 ~~le~le~el~~L~~el~~l~~~I 1795 (1807)
.+++.+......|...+..-...|
T Consensus 294 ~~~~~l~~rw~~l~~~~~~R~~~L 317 (322)
T 1u4q_A 294 AKMKGLKGKVSDLEKAAAQRKAKL 317 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 75
>3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C
Probab=97.05 E-value=0.56 Score=51.78 Aligned_cols=16 Identities=25% Similarity=0.329 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1769 SQESELTELSKNIAEL 1784 (1807)
Q Consensus 1769 ~~e~~le~le~el~~L 1784 (1807)
.....+++....+..+
T Consensus 190 ~~~~~~~e~s~~i~~i 205 (213)
T 3g67_A 190 TSKESLSEKSAEIDSA 205 (213)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 76
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=97.04 E-value=0.56 Score=55.07 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSA 1690 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~ 1690 (1807)
..+.+....++..+..+......+
T Consensus 130 k~~~~~~~~l~KaK~~Y~~~~~e~ 153 (305)
T 2efl_A 130 QHIETCWKQLESSKRRFERDCKEA 153 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333344443333333
No 77
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=96.99 E-value=0.09 Score=54.11 Aligned_cols=20 Identities=5% Similarity=-0.175 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2547 1703 EVALAQKQASGLRSRYQETD 1722 (1807)
Q Consensus 1703 ~a~~ae~~l~el~~~l~~~~ 1722 (1807)
+...+++.+.+....++.++
T Consensus 116 r~~~L~~ql~e~~~~l~~lq 135 (154)
T 2ocy_A 116 LNKRLTEQLREKDTLLDTLT 135 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 78
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.95 E-value=0.00025 Score=74.17 Aligned_cols=100 Identities=24% Similarity=0.574 Sum_probs=57.1
Q ss_pred CCcCCCCccccCCCcccc---------cccccCCCCcccCCCCCCCCC---CCCCCCCCCCCCccCCCC--ccccCCCcc
Q psy2547 1041 PCDRTTGQCPCLPNVIGV---------SCDRCLKNHWKIASGTGCEPC---DCDPIGSVDVTECNEYTG--QCQCKSGFG 1106 (1807)
Q Consensus 1041 ~C~~~tG~C~C~~g~~G~---------~C~~C~~g~~~~~~~~~C~~c---~C~~~gs~~~~~C~~~tg--~C~C~~g~~ 1106 (1807)
.|.. +..|.|++||+|. .|+. ...|..- +|.+.+ .|....| .|.|++||+
T Consensus 14 ~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~d----------ideC~~~~~~~C~~~~-----~C~n~~g~y~C~C~~Gy~ 77 (143)
T 2bou_A 14 SCVN-ATACRCNPGFSSFSEIITTPMETCDD----------INECATLSKVSCGKFS-----DCWNTEGSYDCVCSPGYE 77 (143)
T ss_dssp EESS-SSCEEECTTEECSSSSBCSTTCCCEE----------CCGGGC----CCCTTE-----EEEECSSCEEEEECTTEE
T ss_pred EEcC-CCEEeCCCCCcCccccccCCCCcCCc----------cccccCCCCCCCCCCC-----EEEcCCCCeEeECCCCcc
Confidence 4655 3789999999984 5532 2345432 565544 7876554 799999999
Q ss_pred cCCCCcCCCCccCC---CCCCCcc--CCCCCCCCCCCccccCCc--eEeccCCccccCCCc
Q psy2547 1107 GRQCDQCQTNFWGN---PNVECFP--CDCDPSGSATSQCHQNNG--TCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1107 G~~C~~C~~g~~g~---~~~~C~~--C~C~~~gs~~~~C~~~tG--~C~C~~g~~G~~C~~ 1160 (1807)
|..|..=-.+..+. ....|.. =.|.+ ..+|....| .|.|++||+|..+..
T Consensus 78 g~~~~~~~~~~~~~~C~dideC~~~~~~C~~----~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 78 PVSGAKTFKNESENTCQDVDECSSGQHQCDS----STVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp ETTCCSCBSSGGGCCEEECCHHHHTCCCCCT----TSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred cCcCccccccCCCCCcCCccCccCcCCCCCC----CCEEECCCCCEEeeCCCCcccCCCCc
Confidence 98765200000010 0001210 12333 235655444 799999999987653
No 79
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.90 E-value=0.00014 Score=91.17 Aligned_cols=77 Identities=30% Similarity=0.790 Sum_probs=32.5
Q ss_pred cccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCcCCCCccCCCCCCCccC
Q psy2547 1049 CPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPC 1128 (1807)
Q Consensus 1049 C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C 1128 (1807)
+.|.++|.|..|+. ..|.. +|.+ | .|.. ++.|.|.+||+|..|+. ..|.+
T Consensus 379 ~~C~~~~~g~~c~~-----------~~C~~-~C~n-G-----~C~~-~~~C~C~~G~~G~~C~~----------~~C~~- 428 (463)
T 2wg3_C 379 EECRATVQPAQTLT-----------SECSR-LCRN-G-----YCTP-TGKCCCSPGWEGDFCRT----------AKCEP- 428 (463)
T ss_dssp GGGCCCCCCCCCCC-----------CHHHH-HCCS-E-----EECT-TSCEEECTTEESTTSCE----------ECC---
T ss_pred ccCCCCCcCCCCcc-----------ccccC-CCCC-C-----ccCC-CCeECCCCCcCCCcCCc----------CcCCC-
Confidence 45667777777753 23432 3554 5 7875 57999999999999973 13544
Q ss_pred CCCCCCCCCCccccCCceEeccCCccccCCCc
Q psy2547 1129 DCDPSGSATSQCHQNNGTCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1129 ~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~ 1160 (1807)
.|.+.| +|.. .++|.|.+||+|..|+.
T Consensus 429 ~C~~~g----~C~~-~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 429 ACRHGG----VCVR-PNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp --------------------------------
T ss_pred CCCCCC----EECC-CCEEECCCCcccCCCCC
Confidence 565544 6864 47999999999999986
No 80
>1qu7_A Methyl-accepting chemotaxis protein I; serine, four helical-bundle, signaling protein; 2.60A {Escherichia coli} SCOP: h.4.5.1
Probab=96.88 E-value=0.85 Score=51.08 Aligned_cols=7 Identities=0% Similarity=0.088 Sum_probs=2.5
Q ss_pred HHHHhhh
Q psy2547 1793 NFIVDKS 1799 (1807)
Q Consensus 1793 ~~I~~~~ 1799 (1807)
+.|...+
T Consensus 213 ~~L~~~v 219 (227)
T 1qu7_A 213 SRLTEAV 219 (227)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 81
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=96.88 E-value=0.0014 Score=68.83 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=54.6
Q ss_pred CCCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCC--Cccch
Q psy2547 96 FSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGK--TWQVY 168 (1807)
Q Consensus 96 ~~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~--~w~~~ 168 (1807)
..||+++|+|+ +..|+|.|. +..+-.|+|||++...|.-|.|+|. ++..+.||.|.| |+ .|+..
T Consensus 33 ~~~~~~~~iDg-----n~~T~W~t~-g~~Pq~i~Idf~k~~~is~~~i~~~--~vk~~~ie~s~d-~~p~~w~~i 98 (153)
T 1tvg_A 33 EKHPPENIIDG-----NPETFWTTT-GMFPQEFIICFHKHVRIERLVIQSY--FVQTLKIEKSTS-KEPVDFEQW 98 (153)
T ss_dssp TTSCGGGGGSS-----CTTCCEECC-SCSSEEEEEEEEEEEEEEEEEEEEE--SEEEEEEEEECS-SSSCCCEEE
T ss_pred cccCHHHcCcC-----CCCceEECC-CCCCcEEEEECCCceEEEEEEEEec--CCEEEEEEEECC-CCCcceEEe
Confidence 47999999995 567999994 5556788999999999999999987 589999999988 76 88775
No 82
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=96.86 E-value=0.0012 Score=68.47 Aligned_cols=64 Identities=11% Similarity=0.217 Sum_probs=54.5
Q ss_pred CCCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCC--CCccch
Q psy2547 96 FSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFG--KTWQVY 168 (1807)
Q Consensus 96 ~~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g--~~w~~~ 168 (1807)
..||+++|+|+ +..|+|.|. +..+-.|+|+|++...|..|.|+|. ++..+.||.|.| | +.|+++
T Consensus 25 ~~~~~~~~iDg-----~~~T~W~s~-g~~pq~i~I~~~~~~~is~~~i~~~--~~k~~~ie~s~~-~~p~~w~~i 90 (139)
T 2yc2_A 25 ERFPPENMLDG-----KDNTFWVTT-GMFPQEFVLRLESCIRVSKITTLSL--NVRKLAVEKCDQ-DKPDQFEKV 90 (139)
T ss_dssp TTSCGGGGGSS-----CTTCCEECC-SSSCEEEEEEEEEEEEEEEEEEEEE--SEEEEEEEEECS-SSCCCCEEE
T ss_pred CCCChhheECC-----CCCCEEeCC-CCCCeEEEEECCCceEEEEEEEEec--CCcEEEEEEecC-CCCCceEEE
Confidence 47999999995 567999994 5556688999999999999999986 599999999998 5 789886
No 83
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=96.82 E-value=0.55 Score=57.98 Aligned_cols=20 Identities=5% Similarity=0.076 Sum_probs=9.0
Q ss_pred ccCCCHHHHHHHHHHHHHHH
Q psy2547 1553 NIQSNPEQIRERANEINNVI 1572 (1807)
Q Consensus 1553 ~i~~~~~~I~~l~~~i~~~~ 1572 (1807)
+.-..-..++.+.++-..+.
T Consensus 29 d~GkDL~sVe~LLqKH~~lE 48 (450)
T 3r6n_A 29 AWGVDLASVEQHINSHRGIH 48 (450)
T ss_dssp CCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHH
Confidence 33334444555555444333
No 84
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=96.82 E-value=1 Score=55.31 Aligned_cols=27 Identities=15% Similarity=-0.057 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1770 QESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1770 ~e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
..+++..+.-.-+.|+++.+.+...|+
T Consensus 364 ~~~~~~~~~~~~~~~~~q~~~~~~~~~ 390 (406)
T 4dyl_A 364 ALQGLQVALCSQAKLQAQQELLQTKLE 390 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444443
No 85
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=96.76 E-value=0.87 Score=58.21 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy2547 1671 LLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLS 1750 (1807)
Q Consensus 1671 ~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~ 1750 (1807)
++-+..+.++..+.+....+.+.+.+++....+++.++++.+.++++.+++++.+++.+...+ ..+++|.++++.
T Consensus 463 ~fl~~~~~~~~~ilq~d~~l~~~~k~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~---e~~~ql~~kme~-- 537 (592)
T 1f5n_A 463 TYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQ---EHLKQLTEKMEN-- 537 (592)
T ss_dssp HHHHHTHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH--
Confidence 333444444444444444444445555555666666666666666666666665555443332 233333332222
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy2547 1751 VNTTAKLKQL-NETEAMFNSQESELTE-LSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1751 ~~~~~~~~~l-~~Le~~i~~~e~~le~-le~el~~L~~el~~l~~~ 1794 (1807)
+.+..+++. ..|+.++++.++-|++ ...+...|+++|..+...
T Consensus 538 -~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 538 -DRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111222222 1233344443333443 566777777777776665
No 86
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=96.75 E-value=0.0016 Score=68.06 Aligned_cols=64 Identities=25% Similarity=0.350 Sum_probs=54.5
Q ss_pred CCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcC--CCCCcEEEEEecCCCCCccchh
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT--FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s--~rP~~~~iers~d~g~~w~~~q 169 (1807)
.|++++++|+ +..|+|.+... ..|+|||++.+.|..|.|+|.. .+|..+.|+-|.| |.+|+++.
T Consensus 23 ~~~~~~a~Dg-----~~~t~W~~~~~---~~l~vDLg~~~~v~~v~i~~~~~~~~~~~~~i~~S~D-g~~w~~~~ 88 (145)
T 2jda_A 23 GHVPANIADG-----DVKTRWAASGE---SWVQLELDKEQSIENILIVPFKPTERKLKFSIFYSND-GKNWQPLA 88 (145)
T ss_dssp TBCGGGGGSS-----CTTCCEEEESS---EEEEEEEEEEEEEEEEEEEESSTTTCCEEEEEEEESS-SSSCEEEE
T ss_pred CCCchhcccC-----CCCCeECCCCC---eeEEEECCCceEEEEEEEEeccCCCceEEEEEEEeCC-CCceEEee
Confidence 5778899985 45699998754 7899999999999999999953 4899999999998 99998764
No 87
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=96.74 E-value=0.32 Score=61.25 Aligned_cols=26 Identities=0% Similarity=-0.114 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1662 SNETNVKVKLLQERLKSIQAGFLQNG 1687 (1807)
Q Consensus 1662 l~~~e~~l~~l~~~le~lk~~l~~~~ 1687 (1807)
...+.+.+....+.++..+.++....
T Consensus 138 ~~k~qk~l~~~~~~l~KaKk~Y~~~c 163 (486)
T 3haj_A 138 FRKAQKPWAKKLKEVEAAKKAHHAAC 163 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444433
No 88
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=96.73 E-value=0.91 Score=52.45 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy2547 1560 QIRERANEINNVIKSLTDIDTILTE-TAGDLAKANDLKRKANL 1601 (1807)
Q Consensus 1560 ~I~~l~~~i~~~~~~L~~~~~~l~~-~~~~l~~a~~L~~~a~~ 1601 (1807)
.+..|...+.+-...++++...+.+ ++-+.+-++.|.+-+..
T Consensus 19 g~~~l~~~~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~ 61 (276)
T 2v0o_A 19 GFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKS 61 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555555555555544444332 22222334555444443
No 89
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=96.62 E-value=1 Score=53.78 Aligned_cols=32 Identities=3% Similarity=-0.051 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1662 SNETNVKVKLLQERLKSIQAGFLQNGRSAMDV 1693 (1807)
Q Consensus 1662 l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a 1693 (1807)
+..+...+......++..+..+......++.+
T Consensus 136 ~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a 167 (337)
T 2x3v_A 136 FRKAQKPWAKKMKELEAAKKAYHLACKEERLA 167 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443333333
No 90
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=96.58 E-value=0.042 Score=65.90 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy2547 1740 QMLLNKASQLSVNTTAKL 1757 (1807)
Q Consensus 1740 ~~l~~~a~~l~~~~~~~~ 1757 (1807)
+.+..++++|+.++..++
T Consensus 141 edq~~kIQRLEvDIdiqi 158 (562)
T 3ghg_A 141 RAQLVDMKRLEVDIDIKI 158 (562)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 91
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=96.54 E-value=0.3 Score=58.17 Aligned_cols=7 Identities=0% Similarity=0.411 Sum_probs=2.7
Q ss_pred HHHHHHH
Q psy2547 1715 RSRYQET 1721 (1807)
Q Consensus 1715 ~~~l~~~ 1721 (1807)
+..|..+
T Consensus 408 ~a~~d~~ 414 (551)
T 2b5u_A 408 QAAFDAA 414 (551)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 92
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=96.50 E-value=0.0027 Score=67.73 Aligned_cols=66 Identities=11% Similarity=0.172 Sum_probs=55.1
Q ss_pred CCCccccccccCCCCCCccccccCC---CCcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSEN---GVENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~---~~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~w~~~ 168 (1807)
.+++++++|+ +..|+|.|.. ...+..|+|||++.+.|..|.+... ..+|..+-|+-|.| |.+|+.+
T Consensus 44 ~~~~~~a~DG-----~~~T~W~s~~~~~~~~p~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~S~D-G~~W~~v 116 (161)
T 4a41_A 44 EGLAKFAIDG-----KENTIWHTKYNPVEELPQSITLELGGSYEINKFTYLPRSGAKNGNITKYELHVSED-GNNFRKI 116 (161)
T ss_dssp CCCGGGGGSS-----CTTCCEECCTTTTCCSCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEESS-SSCEEEE
T ss_pred CCcHHHcCcC-----CCCCeEEeCCCCCCCCCEEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEEECC-CCceEEe
Confidence 4889999996 4679999974 2357899999999999999998874 35788999999988 9999885
No 93
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=96.48 E-value=0.0042 Score=66.07 Aligned_cols=67 Identities=15% Similarity=0.292 Sum_probs=56.0
Q ss_pred CCCccccccccCCCCCCccccccCCC----CcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENG----VENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~----~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~w~~~ 168 (1807)
.+++++++|+ +..|+|.|... ..+..|+|||++.+.|..|.+.+. ..+|..+.|+-|.| |.+|+.+
T Consensus 27 ~g~~~~a~DG-----~~~T~W~s~~~~~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~S~D-g~~W~~v 100 (159)
T 3f2z_A 27 NGHAKHLIDG-----NIETFWHSRWQGGSDPLPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEASED-GTNWESI 100 (159)
T ss_dssp SBSGGGGSSS-----CTTCCEECCCTTCCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESS-SSSCEEE
T ss_pred CCcHHhcCCC-----CCCCeEEcCCcCCCCCCCEEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEEEcC-CCCeEEe
Confidence 5789999996 45699998742 346899999999999999999874 35899999999988 9999885
Q ss_pred h
Q psy2547 169 R 169 (1807)
Q Consensus 169 q 169 (1807)
.
T Consensus 101 ~ 101 (159)
T 3f2z_A 101 G 101 (159)
T ss_dssp E
T ss_pred E
Confidence 3
No 94
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.42 E-value=0.00021 Score=75.11 Aligned_cols=47 Identities=32% Similarity=0.637 Sum_probs=31.8
Q ss_pred CccccCCCcc---cccccccCCCCcccCCCCCCC--CCCCCCCCCCCCCCccCCCC--ccccCCCcccCC
Q psy2547 1047 GQCPCLPNVI---GVSCDRCLKNHWKIASGTGCE--PCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQ 1109 (1807)
Q Consensus 1047 G~C~C~~g~~---G~~C~~C~~g~~~~~~~~~C~--~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~ 1109 (1807)
..|.|++||+ |..|+. ...|. +..|.+ | +|....| .|.|++||+|..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~d----------ideC~~~~~~C~~-g-----~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCED----------IDECEVFPGVCKN-G-----LCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEEE----------CCHHHHSTTCSSS-S-----EEEEETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccCc----------cccccCCCCCCCC-C-----EEECCCCCEEeeCCCCCccCC
Confidence 4689999995 888863 34453 333543 3 6765555 699999998754
No 95
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=96.39 E-value=0.037 Score=66.43 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1748 QLSVNTTAKLKQLNETEAMFNSQESELTELSKNI 1781 (1807)
Q Consensus 1748 ~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el 1781 (1807)
.|+.++..+++.|+.|+..|+++..+|+.||.+|
T Consensus 121 yLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDI 154 (562)
T 3ghg_A 121 VLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444444444444444444443
No 96
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=96.36 E-value=3.2 Score=51.18 Aligned_cols=13 Identities=8% Similarity=-0.133 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHH
Q psy2547 1561 IRERANEINNVIK 1573 (1807)
Q Consensus 1561 I~~l~~~i~~~~~ 1573 (1807)
++++...|.+...
T Consensus 11 v~dl~~Wl~E~~~ 23 (450)
T 3r6n_A 11 TSECLGWMRQQRA 23 (450)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 97
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=96.31 E-value=2.6 Score=49.67 Aligned_cols=25 Identities=12% Similarity=0.247 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1770 QESELTELSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1770 ~e~~le~le~el~~L~~el~~l~~~ 1794 (1807)
...+|+.+..+-..|....+.-...
T Consensus 296 i~~~l~~L~~~w~~l~~~w~~R~~~ 320 (323)
T 3edv_A 296 IKEKLLQLTEKRKEMIDKWEDRWEW 320 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444333
No 98
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=96.22 E-value=0.47 Score=56.58 Aligned_cols=9 Identities=22% Similarity=0.660 Sum_probs=4.3
Q ss_pred CCCHHHHHH
Q psy2547 1555 QSNPEQIRE 1563 (1807)
Q Consensus 1555 ~~~~~~I~~ 1563 (1807)
+.++.++++
T Consensus 290 ilt~~elkq 298 (551)
T 2b5u_A 290 VLSPDQVKQ 298 (551)
T ss_dssp CCCHHHHHH
T ss_pred cCCHHHHHH
Confidence 345555543
No 99
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.21 E-value=0.0052 Score=66.01 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=55.1
Q ss_pred CCCccccccccCCCCCCcccccc--CC-CCcceeEEEeccceeEEEEEEEEEc--------CCCCCcEEEEEecCCCCCc
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQS--EN-GVENVTIQLDMEAEFHFTHLIIYFK--------TFRPAAMLIERSHDFGKTW 165 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs--~~-~~~~v~i~l~l~~~f~~~~~~~~f~--------s~rP~~~~iers~d~g~~w 165 (1807)
.||+++|+|. +..|||.| .. ...+-.|+|||+++..|+.|.+.+. ...|..+-|+-|.| |.+|
T Consensus 38 G~~~~~liDg-----n~~T~Wht~w~~~~~~P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S~D-g~~W 111 (172)
T 3hnm_A 38 GWGVESLIDN-----NPGTQWLCRWDVKEPLPYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEASID-NENW 111 (172)
T ss_dssp SCSGGGGSSS-----CTTSCEECCCSSCCCSCEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEESS-SSCE
T ss_pred CccHHHcCCC-----CCCCeEEecCCCCCCCCEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEEeC-CCCe
Confidence 6899999995 45699998 43 3356789999999999999988875 24789999999999 8899
Q ss_pred cchh
Q psy2547 166 QVYR 169 (1807)
Q Consensus 166 ~~~q 169 (1807)
++.-
T Consensus 112 ~~v~ 115 (172)
T 3hnm_A 112 VKLK 115 (172)
T ss_dssp EEEE
T ss_pred EEeE
Confidence 8754
No 100
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=96.17 E-value=0.011 Score=62.36 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=60.4
Q ss_pred CccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCcccccc---
Q psy2547 43 ATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQS--- 119 (1807)
Q Consensus 43 ~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs--- 119 (1807)
...|||.|+ +++|||+-+ .+++++++|+ +..|+|.+
T Consensus 8 ~~~NlA~~k--~ataSS~~~----------------------------------~~~a~~AvDG-----~~~t~W~~~~c 46 (153)
T 3lei_A 8 ETENIARGK--QASQSSTAY----------------------------------GGAATRAVDG-----NVDSDYGHHSV 46 (153)
T ss_dssp CSCCTTTTC--EEEESCCCT----------------------------------TCCGGGGGSS-----CCCCCGGGTCS
T ss_pred CCcccCCCC--CeeECCCcC----------------------------------CCCccccccC-----CCCCccccCcc
Confidence 357999886 778888653 1234578885 45689987
Q ss_pred --CCCCcceeEEEeccceeEEEEEEEEEcC------CCCCcEEEEEecCCCCCccc
Q psy2547 120 --ENGVENVTIQLDMEAEFHFTHLIIYFKT------FRPAAMLIERSHDFGKTWQV 167 (1807)
Q Consensus 120 --~~~~~~v~i~l~l~~~f~~~~~~~~f~s------~rP~~~~iers~d~g~~w~~ 167 (1807)
.....+-.|++||++.+.|..|+| |.. .|-..+-|+=|.+.|.+|..
T Consensus 47 t~t~~~~~~W~~VDLg~~~~v~~V~i-~~~~d~~~~~r~~~~~I~vs~~dg~~w~~ 101 (153)
T 3lei_A 47 THTNFEDNAWWQVDLGKTENVGKVKL-YNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp CCCCSBTTCEEEEEEEEEEEEEEEEE-EECCSTTCGGGSCSEEEEEECTTCCEEEE
T ss_pred ccCCCCCCCeEEEECCCceEEeEEEE-EeCCCCcccccceeEEEEEECCCCCcccc
Confidence 344557789999999999999999 532 25567888877656888853
No 101
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=96.11 E-value=0.0072 Score=75.19 Aligned_cols=65 Identities=17% Similarity=0.307 Sum_probs=56.2
Q ss_pred CCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEc---CCCCCcEEEEEecCCCCCccch
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFK---TFRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~---s~rP~~~~iers~d~g~~w~~~ 168 (1807)
+.+++++|+ +..|||.+..+...-.|+|||++...|..|+|+.. .-|-.++.||-|.| |++|++.
T Consensus 343 ~~~~~a~Dg-----d~~TyW~a~~~~~~~wl~vDLg~~~~vn~V~lqe~i~~gqrv~~y~Ve~s~D-G~~W~~v 410 (469)
T 3eyp_A 343 YSPEKMLDN-----EKNTYFAGKDGEVKADIIFTLPKTIEFDCLMIEEVIELGHRTTKWSVEYTVD-GKNWITI 410 (469)
T ss_dssp GCGGGGGSC-----CSSCCEECCTTCCCEEEEEEEEEEEEEEEEEEEECGGGCSCEEEEEEEEESS-SSCCEEC
T ss_pred CChhhcccC-----CCCceEeCCCCCCCcEEEEECCCCcEEeEEEEeecccCCCCeEEEEEEEEcC-CCceEEE
Confidence 455689985 56799999988778899999999999999999975 67889999999988 9999874
No 102
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=96.10 E-value=0.0069 Score=63.62 Aligned_cols=63 Identities=22% Similarity=0.355 Sum_probs=51.3
Q ss_pred CccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCCccch
Q psy2547 99 KIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 99 ~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~w~~~ 168 (1807)
++++++|+ +..|+|.+...... .++|||++.+.|+.|.+++....+..+.|+-|.| |.+|+++
T Consensus 42 ~a~~aiDG-----n~~T~W~s~~~~~p-~~~VDLg~~~~V~~v~i~~~r~~v~~y~I~~S~D-G~~W~~~ 104 (149)
T 4a42_A 42 EANNLRDG-----NENTLWVPGQEEEK-SVTFDLSKEKDISAIDIVSKGNSPLKYSIEISND-GTEWTKI 104 (149)
T ss_dssp GGGGGGSS-----CTTSCBCCCSCSSE-EEEEEEEEEEECCEEEEEECSSSCCCEEEEEESS-SSSCEEE
T ss_pred ChHhcEeC-----CCCCEEEcCCCCCC-eEEEECCCcEEEEEEEEEcCCCCcEEEEEEEEcC-CCeEeEe
Confidence 34578885 56799988765333 4599999999999999988766699999999988 9999875
No 103
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=96.05 E-value=0.57 Score=42.91 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1669 VKLLQERLKSIQAGFLQNGRSAMDVENEE 1697 (1807)
Q Consensus 1669 l~~l~~~le~lk~~l~~~~~~~~~a~~~a 1697 (1807)
+.+-..+++..++++.++.+.++++..+.
T Consensus 57 lQqh~aRlnsqQrQI~ENhkEMKq~aaqs 85 (114)
T 2xzr_A 57 LQQHSARLDSQQRQINENHKEMKQIEDKI 85 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444443433333333
No 104
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.01 Score=63.78 Aligned_cols=67 Identities=12% Similarity=0.215 Sum_probs=55.2
Q ss_pred CCCccccccccCCCCCCccccccCCC----CcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENG----VENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~----~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~w~~~ 168 (1807)
..|+++++|+ +..|+|.|.-. ..+..|+|||++.+.|..|.+... ..+|..+-|+-|.| |.+|+++
T Consensus 37 ~g~~~~a~DG-----~~~T~W~s~~~~~~~~~p~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~S~D-g~~W~~v 110 (169)
T 3ggl_A 37 NGLAKCLIDG-----DTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASED-NVNWTPI 110 (169)
T ss_dssp CBSGGGGGSS-----CSSCCEECCCSSCCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESS-SSCCEEE
T ss_pred CCcHHhcCCC-----CCCCceEccCcCCCCCCCEEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEEeCC-CCCcEEe
Confidence 4678999996 45689988631 346899999999999999998874 36899999999998 9999885
Q ss_pred h
Q psy2547 169 R 169 (1807)
Q Consensus 169 q 169 (1807)
.
T Consensus 111 ~ 111 (169)
T 3ggl_A 111 G 111 (169)
T ss_dssp E
T ss_pred E
Confidence 3
No 105
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=95.98 E-value=0.0065 Score=63.53 Aligned_cols=65 Identities=11% Similarity=0.165 Sum_probs=53.7
Q ss_pred CCCccccccccCCCCCCccccccCCC----CcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCCccc
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENG----VENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKTWQV 167 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~----~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~w~~ 167 (1807)
.|++++++|+ +..|+|.|.-. ..+..|+|||++.+.|..|.|++. ..+|..+.|+=|.| |.+|++
T Consensus 25 ~~~~~~~~DG-----~~~t~w~s~~~~~~~~~~~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~D-g~~w~~ 97 (150)
T 2j1a_A 25 NAPASFASDG-----DMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLD-GENFTE 97 (150)
T ss_dssp CBCGGGGSSS-----CTTCCEECCCSSSCCCSCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESS-SSSEEE
T ss_pred CCcHHhcCcC-----CCCCcEEccccCCCCCCCeEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEEEEcC-CCceEE
Confidence 4788899996 45689988642 347899999999999999999875 35788999999988 899985
No 106
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=95.93 E-value=1.5 Score=51.78 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHH
Q psy2547 1560 QIRERANEINNVIKSLTDIDTILT 1583 (1807)
Q Consensus 1560 ~I~~l~~~i~~~~~~L~~~~~~l~ 1583 (1807)
.+..|...+.+-...++++...+.
T Consensus 30 g~~~l~~r~~~g~~~~~el~~f~k 53 (312)
T 3abh_A 30 NYKRTVKRIDDGHRLCSDLMNCLH 53 (312)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555554443
No 107
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=95.78 E-value=0.19 Score=51.41 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=13.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhhh
Q psy2547 1555 QSNPEQIRERANEINNVIKSLT 1576 (1807)
Q Consensus 1555 ~~~~~~I~~l~~~i~~~~~~L~ 1576 (1807)
+..++.|..++..+.+.+..|.
T Consensus 24 ~e~ee~L~~vA~~vd~km~ei~ 45 (138)
T 3hnw_A 24 YESEEYLQRVASYINNKITEFN 45 (138)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777766665554
No 108
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.72 E-value=0.0066 Score=63.50 Aligned_cols=37 Identities=30% Similarity=0.760 Sum_probs=27.7
Q ss_pred CCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 911 DIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 911 ~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
.+.|.+-||.++ ++|.... +.+.|.|++||+|..|+.
T Consensus 48 ideC~~~pC~n~--------g~C~~~~--~~y~C~C~~G~~G~~C~~ 84 (146)
T 1x7a_L 48 GDQCEPNPCLNG--------GLCKDDI--NSYECWCQVGFEGKNCEL 84 (146)
T ss_dssp --CCSSCSSCTT--------CEEEECS--SCEEEECCSSEESTTTCE
T ss_pred cCcCCCCCCCCC--------CEeECCC--CCEEEecCCCCcCCcCCC
Confidence 356777788765 6886544 468999999999999974
No 109
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=95.72 E-value=7.1 Score=51.27 Aligned_cols=33 Identities=24% Similarity=0.118 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1616 IVDVLTEARTAQDMAEVAIQTAKDDISAARKDL 1648 (1807)
Q Consensus 1616 l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l 1648 (1807)
+...+...+..++.+.+.=..+...++..+..|
T Consensus 494 l~~~~~~~~~~l~~A~~sD~~v~~~~~~~~~~l 526 (704)
T 2xs1_A 494 LRAEGTNFRTVLDKAVQADGQVKECYQSHRDTI 526 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344444444444444433333333344333333
No 110
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.69 E-value=0.0045 Score=64.74 Aligned_cols=67 Identities=22% Similarity=0.638 Sum_probs=42.9
Q ss_pred CCCCCCcCCCCCCCCCCCCCcCCCC--ccccCCCcccccccccCCCCcccCCCCCCCC--CCCCCCCCCCCCCc-cCC--
Q psy2547 1023 QNCTECTCNILGIDHSKGPCDRTTG--QCPCLPNVIGVSCDRCLKNHWKIASGTGCEP--CDCDPIGSVDVTEC-NEY-- 1095 (1807)
Q Consensus 1023 ~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~--c~C~~~gs~~~~~C-~~~-- 1095 (1807)
+.|.+-+|.++| .|....| .|.|++||+|..|+. ...|.. +.|.. .| ...
T Consensus 49 deC~~~pC~n~g------~C~~~~~~y~C~C~~G~~G~~C~~----------~deC~~~~~~C~~-------~C~~n~~g 105 (146)
T 1x7a_L 49 DQCEPNPCLNGG------LCKDDINSYECWCQVGFEGKNCEL----------DATCNIKNGRCKQ-------FCKTGADS 105 (146)
T ss_dssp -CCSSCSSCTTC------EEEECSSCEEEECCSSEESTTTCE----------ECCTTSGGGSCSS-------BCCCCSSS
T ss_pred CcCCCCCCCCCC------EeECCCCCEEEecCCCCcCCcCCC----------CccccCCCCCCcC-------CCCCCCCC
Confidence 446666777765 4665544 899999999999975 123332 23322 45 433
Q ss_pred CCccccCCCcc----cCCCCc
Q psy2547 1096 TGQCQCKSGFG----GRQCDQ 1112 (1807)
Q Consensus 1096 tg~C~C~~g~~----G~~C~~ 1112 (1807)
+..|.|++||+ |..|+.
T Consensus 106 ~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 106 KVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CCCCBCCTTEEECTTSSSEEE
T ss_pred CEEeEcCCCcEeCCCCCcCCC
Confidence 34799999998 777764
No 111
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.57 E-value=0.002 Score=67.14 Aligned_cols=73 Identities=27% Similarity=0.717 Sum_probs=47.8
Q ss_pred CCCCCCcCCCCCCCCCCCCCcCCCC--ccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCC---
Q psy2547 1023 QNCTECTCNILGIDHSKGPCDRTTG--QCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG--- 1097 (1807)
Q Consensus 1023 ~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg--- 1097 (1807)
+.|.+-+|.++| .|....| .|.|++||+|..|+. ....|.+|.|.+.+ ... .|....|
T Consensus 48 d~C~~~pC~n~g------~C~~~~g~y~C~C~~G~~G~~C~~---------~~~~c~~c~~~~~~-C~~-~C~~~~g~~y 110 (142)
T 2c4f_L 48 DQCASSPCQNGG------SCKDQLQSYICFCLPAFEGRNCET---------HKDDQLICVNENGG-CEQ-YCSDHTGTKR 110 (142)
T ss_dssp CGGGGCCCCTTC------EEEEETTEEEEECCTTEESTTSCE---------EGGGCCSTTTGGGG-CSS-EEECCTTSCC
T ss_pred CcCcCCCcCCCC------EEeCCCCCEEeeCCCCccCCcccc---------CccccccccCCCCC-ccC-EeECCCCCCE
Confidence 346666777765 4666555 899999999999974 11234455554422 122 5765444
Q ss_pred ccccCCCcc----cCCCCc
Q psy2547 1098 QCQCKSGFG----GRQCDQ 1112 (1807)
Q Consensus 1098 ~C~C~~g~~----G~~C~~ 1112 (1807)
.|.|++||+ |+.|+.
T Consensus 111 ~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 111 SCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp EEECCTTEEECTTSSCEEE
T ss_pred EEECCCCceECCCCCCCCC
Confidence 699999999 787763
No 112
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=95.55 E-value=0.024 Score=59.62 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=46.0
Q ss_pred CccccccccCCCCCCcccccc-----CCCCcceeEEEeccceeEEEEEEEEEc-----CCCCCcEEEEEecCCCCCccc
Q psy2547 99 KIHNIVYATVPRTKTISWWQS-----ENGVENVTIQLDMEAEFHFTHLIIYFK-----TFRPAAMLIERSHDFGKTWQV 167 (1807)
Q Consensus 99 ~~~~~~~~~~~~~~~~~wwqs-----~~~~~~v~i~l~l~~~f~~~~~~~~f~-----s~rP~~~~iers~d~g~~w~~ 167 (1807)
++++++|+ +..|+|.+ .....+--|++||++.|.|..|+|.-. ..|-..+-|+=+...|.+|..
T Consensus 28 ~a~~AvDG-----~~~t~w~~~sct~t~~~~~~W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~~~~I~v~s~dg~~w~~ 101 (153)
T 4gwi_A 28 AATRAVDG-----NVDSDYGHHSVTHTNFEDNAWWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp CGGGGGSS-----CCCCCGGGTCCCCCCSBTTCEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTSCEEEE
T ss_pred CcceeEcC-----CCCCcccccccccCCCCCCCEEEEECCCCEEEEEEEEEcccCCchhhcccceEEEEECCCCCeeee
Confidence 44578885 46688986 334457789999999999999999743 356667767554434888854
No 113
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.50 E-value=0.0018 Score=67.63 Aligned_cols=65 Identities=20% Similarity=0.440 Sum_probs=39.4
Q ss_pred CCCCccCCCCCcCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCc----CCCCCC
Q psy2547 886 CRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYR----GTRCDG 957 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~----G~~Ce~ 957 (1807)
|.+...|+.| .|++||.|..+....+.|.+|+|.++. ...+|..... ..+.|.|++||+ |.+|+.
T Consensus 61 C~~~~g~y~C-~C~~G~~G~~C~~~~~~c~~c~~~~~~-----C~~~C~~~~g-~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 61 CKDQLQSYIC-FCLPAFEGRNCETHKDDQLICVNENGG-----CEQYCSDHTG-TKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp EEEETTEEEE-ECCTTEESTTSCEEGGGCCSTTTGGGG-----CSSEEECCTT-SCCEEECCTTEEECTTSSCEEE
T ss_pred EeCCCCCEEe-eCCCCccCCccccCccccccccCCCCC-----ccCEeECCCC-CCEEEECCCCceECCCCCCCCC
Confidence 3334445556 566666666554333567777775441 1126754332 168999999999 888874
No 114
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=95.46 E-value=1.6 Score=52.45 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHH
Q psy2547 1560 QIRERANEINNVIKSLTDIDTIL 1582 (1807)
Q Consensus 1560 ~I~~l~~~i~~~~~~L~~~~~~l 1582 (1807)
.++.|...+.+-...++++...+
T Consensus 30 g~~~L~~r~~~g~~~~~el~~f~ 52 (350)
T 3aco_A 30 NYKRTVKRIDDGHRLCSDLMNCL 52 (350)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555444
No 115
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.44 E-value=0.0031 Score=68.94 Aligned_cols=67 Identities=36% Similarity=0.971 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCCCCCCCCccCCCC--ccccCCCcccCCCCc-----CCCCccCCCCCCCccCCCCCCCCCCCccccCC-
Q psy2547 1073 GTGCEPCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQ-----CQTNFWGNPNVECFPCDCDPSGSATSQCHQNN- 1144 (1807)
Q Consensus 1073 ~~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~-----C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~t- 1144 (1807)
...|.+.+|.+.| +|....| .|.|++||+|..|+. |..+ ++.|.. .|....
T Consensus 42 ideC~~~pC~ngg-----~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~----------~~~C~~------~C~n~~g 100 (195)
T 1nfu_B 42 GDQCETSPCQNQG-----KCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD----------NGDCDQ------FCHEEQN 100 (195)
T ss_dssp --------------------------------------------CCGGGTG----------GGGCSS------EEEEETT
T ss_pred CcccCCCCCCCCC-----EeECCCCCeeEeCCCCceeccccccccccccCC----------CCCCCC------EeECCCC
Confidence 4568777888766 7875544 799999999999963 5432 123332 454433
Q ss_pred -ceEeccCCcc----ccCCCc
Q psy2547 1145 -GTCVCHQGIG----GVRCDT 1160 (1807)
Q Consensus 1145 -G~C~C~~g~~----G~~C~~ 1160 (1807)
..|.|.+||+ |..|..
T Consensus 101 sy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 101 SVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp EEEEECCTTEEECTTSSCEEE
T ss_pred CeEEECCCCceeCCCCCcccc
Confidence 4799999999 888864
No 116
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=95.42 E-value=0.012 Score=75.33 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1643 AARKDLSQITNDLDDAQQKSNETNVKVKLLQE 1674 (1807)
Q Consensus 1643 ~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~ 1674 (1807)
+++.++.+++.+...++..|...+..+..|..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~e 370 (575)
T 2i1j_A 339 EYQDRLRQMQEEMERSQANLLEAQDMILRLEE 370 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 33334444444444444444433333333333
No 117
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=95.42 E-value=0.0052 Score=52.41 Aligned_cols=39 Identities=18% Similarity=0.526 Sum_probs=30.0
Q ss_pred CCCCcCCCCCCCCCCCCccCCccccC---CCCCceeeecCCCCcCCCCCC
Q psy2547 911 DIPCRPCPCPGTVESGLSYADTCQLD---PRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 911 ~~~C~~c~C~~~~~~~~~~~~~C~~~---~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
.+.|.+-||.++ ++|... .....+.|.|++||+|.+||.
T Consensus 8 ~~eC~s~pC~Ng--------GtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 8 CAEKEKTFCVNG--------GECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCSTTTTTSCTT--------CEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcCCCCCCC--------CCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 467888999887 799521 122469999999999999994
No 118
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.34 E-value=0.0022 Score=70.12 Aligned_cols=68 Identities=31% Similarity=0.800 Sum_probs=19.1
Q ss_pred CCCCCCcCCCCCCCCCCCCCcCCCC--ccccCCCcccccccccCCCCcccCCC-CCCCC--CCCCCCCCCCCCCccCCCC
Q psy2547 1023 QNCTECTCNILGIDHSKGPCDRTTG--QCPCLPNVIGVSCDRCLKNHWKIASG-TGCEP--CDCDPIGSVDVTECNEYTG 1097 (1807)
Q Consensus 1023 ~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~C~~g~~~~~~~-~~C~~--c~C~~~gs~~~~~C~~~tg 1097 (1807)
+.|.+-+|.++| .|....| .|.|++||.|..|+. .. ..|.. +.|.. .|....|
T Consensus 43 deC~~~pC~ngg------~C~n~~g~y~C~C~~Gf~G~~Ce~---------~i~deC~~~~~~C~~-------~C~n~~g 100 (195)
T 1nfu_B 43 DQCETSPCQNQG------KCKDGLGEYTCTCLEGFEGKNCEL---------FTRKLCSLDNGDCDQ-------FCHEEQN 100 (195)
T ss_dssp -----------------------------------------------------CCGGGTGGGGCSS-------EEEEETT
T ss_pred cccCCCCCCCCC------EeECCCCCeeEeCCCCceeccccc---------cccccccCCCCCCCC-------EeECCCC
Confidence 567777888765 4655544 899999999999964 01 22432 33433 5655444
Q ss_pred --ccccCCCcc----cCCCCc
Q psy2547 1098 --QCQCKSGFG----GRQCDQ 1112 (1807)
Q Consensus 1098 --~C~C~~g~~----G~~C~~ 1112 (1807)
.|.|++||+ |..|..
T Consensus 101 sy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 101 SVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp EEEEECCTTEEECTTSSCEEE
T ss_pred CeEEECCCCceeCCCCCcccc
Confidence 699999998 777753
No 119
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=95.32 E-value=5.9 Score=46.16 Aligned_cols=10 Identities=20% Similarity=0.414 Sum_probs=4.5
Q ss_pred HHHHHHHHhh
Q psy2547 1524 ITKQLDEFLN 1533 (1807)
Q Consensus 1524 l~~~lk~~l~ 1533 (1807)
+.+.+..|+.
T Consensus 29 ~~~el~~f~~ 38 (305)
T 2efl_A 29 ILEKYIKFVK 38 (305)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444445543
No 120
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=95.30 E-value=0.097 Score=48.53 Aligned_cols=22 Identities=27% Similarity=0.483 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDAQQ 1660 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~e~ 1660 (1807)
.++..++++|..++.+++.++.
T Consensus 41 ~ev~~L~kKiq~lE~eld~~ee 62 (81)
T 1ic2_A 41 DELVALQKKLKGTEDELDKYSE 62 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 121
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=95.26 E-value=4.6 Score=48.02 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINNVIKSLTDIDTILTETA-GDLAKANDLKRKANL 1601 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~~~~L~~~~~~l~~~~-~~l~~a~~L~~~a~~ 1601 (1807)
..++.|...+.+-...++++...+.+.. -+.+-++.|.+-+..
T Consensus 20 ~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk 63 (337)
T 2x3v_A 20 GNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKR 63 (337)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666655655555543322 222335555443333
No 122
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.22 E-value=0.0039 Score=66.59 Aligned_cols=103 Identities=27% Similarity=0.677 Sum_probs=56.1
Q ss_pred CccccCCCCCceeeecCCCCc----CCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCccCC------Ccc
Q psy2547 931 DTCQLDPRSQDVICECKEGYR----GTRCDGCLDNYFGNPQERGGSCE----PCDCSNNTDLALPGNCDTL------TGK 996 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~----G~~Ce~C~~g~~g~p~~~~~~C~----~C~C~~~~~~~~~~~C~~~------tG~ 996 (1807)
++|.... +.+.|.|++||+ |.+|+.-.. +.|. +|.+.++ +.|... ...
T Consensus 15 ~~C~n~~--gsy~C~C~~Gy~~~~~g~~C~d~~~----------~~C~~~~~~c~~~~~------~~C~~~~~~~~~~~~ 76 (162)
T 1uzk_A 15 GNCVNTP--GSYICDCPPDFELNPTRVGCVDTRS----------GNCYLDIRPRGDNGD------TACSNEIGVGVSKAS 76 (162)
T ss_dssp SEEEEET--TEEEEECCTTCEECTTSSBEECCCC----------EEEEEEC----------------CEEEEEEEECHHH
T ss_pred CEeECCC--CCEEEeCCCCCeECCCCCcccCCCC----------CcccCCCcccCCCCC------CcccCCcCCcccCce
Confidence 4776544 479999999998 888873111 1121 1211111 345432 236
Q ss_pred cccCCCCCC-CCCCCccc------------C--CCCCCccc------CCCCC--CcCCCCCCCCCCCCCcCCCC--cccc
Q psy2547 997 CLQCRYDTE-GDHCQVCK------------A--GFFGNALE------QNCTE--CTCNILGIDHSKGPCDRTTG--QCPC 1051 (1807)
Q Consensus 997 C~~C~~~~~-G~~C~~C~------------~--G~~G~~~~------~~C~~--C~C~~~g~~~~~~~C~~~tG--~C~C 1051 (1807)
|. |..||. |..|+.|. + ||.|+... +.|.. -+|.+ | .|....| .|.|
T Consensus 77 C~-C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g------~C~n~~gsy~C~C 148 (162)
T 1uzk_A 77 CC-CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-G------KCINTFGSFQCRC 148 (162)
T ss_dssp HH-TTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-S------EEEECSSCEEEEC
T ss_pred ee-CCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-C------EeEcCCCCEEeeC
Confidence 85 888887 77777554 3 88876422 33432 23442 2 3554444 6777
Q ss_pred CCCccccc
Q psy2547 1052 LPNVIGVS 1059 (1807)
Q Consensus 1052 ~~g~~G~~ 1059 (1807)
++||+|..
T Consensus 149 ~~Gy~g~~ 156 (162)
T 1uzk_A 149 PTGYYLNE 156 (162)
T ss_dssp CTTCCBCT
T ss_pred CCCccCCC
Confidence 77777654
No 123
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=95.21 E-value=0.015 Score=74.35 Aligned_cols=12 Identities=8% Similarity=0.232 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHH
Q psy2547 1784 LQKRIQSCINFI 1795 (1807)
Q Consensus 1784 L~~el~~l~~~I 1795 (1807)
|+++|..+..+|
T Consensus 516 lq~qL~~L~~el 527 (575)
T 2i1j_A 516 LHNQLKALKQDL 527 (575)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 124
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=95.21 E-value=2.9 Score=46.05 Aligned_cols=18 Identities=0% Similarity=-0.016 Sum_probs=7.7
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy2547 1555 QSNPEQIRERANEINNVI 1572 (1807)
Q Consensus 1555 ~~~~~~I~~l~~~i~~~~ 1572 (1807)
+.+...++.+.++-..+.
T Consensus 29 ~~dl~~v~~ll~~h~~~~ 46 (214)
T 1s35_A 29 PESLPEAEQLLQQHAGIK 46 (214)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 334444444444444333
No 125
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=95.20 E-value=0.0093 Score=59.56 Aligned_cols=60 Identities=18% Similarity=0.377 Sum_probs=31.8
Q ss_pred CCCCccCCCCCcCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCC
Q psy2547 886 CRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTR 954 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~ 954 (1807)
|.+...++.| .|++||.|..+... .++.+|...++. ...+|.... +.+.|.|++||+|..
T Consensus 28 C~~~~~~y~C-~C~~G~~G~~C~~~-~~~~~C~~~~~~-----C~~~C~n~~--g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 28 CIDGIGSFSC-DCRSGWEGRFCQRE-VSFLNCSLDNGG-----CTHYCLEEV--GWRRCSCAPGYKLGD 87 (114)
T ss_dssp ECCCSSCCCE-EECTTEESTTSCEE-CCSSSSSSGGGG-----CSSEEEECS--SSEEEECCTTEEECT
T ss_pred CCCCCCCcEe-eCCCCCcCCCcCcC-CcCCcCcCCCCC-----CCCEeECCC--CCEEeECCCCeeECC
Confidence 4455556667 57777777655321 111122211110 112675443 469999999999543
No 126
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=95.17 E-value=0.32 Score=48.58 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1640 DISAARKDLSQITNDLDDAQQKS 1662 (1807)
Q Consensus 1640 ~i~~~~~~l~~ie~~l~~~e~~l 1662 (1807)
.|.+++++|..+..+...++.++
T Consensus 21 ~I~~LR~qid~~~~e~a~l~lel 43 (119)
T 3ol1_A 21 EMRELRRQVDQLTNDKARVEVER 43 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444433333333333333
No 127
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.15 E-value=1.5 Score=57.93 Aligned_cols=48 Identities=31% Similarity=0.797 Sum_probs=29.4
Q ss_pred CccCC--CCccccCCCcc---cCCCC---cCCCCccCCCCCCCccCCCCCCCCCCCccccC--CceEeccCCccc
Q psy2547 1091 ECNEY--TGQCQCKSGFG---GRQCD---QCQTNFWGNPNVECFPCDCDPSGSATSQCHQN--NGTCVCHQGIGG 1155 (1807)
Q Consensus 1091 ~C~~~--tg~C~C~~g~~---G~~C~---~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~--tG~C~C~~g~~G 1155 (1807)
.|... ...|.|++||. |..|+ +|... ..|. ..|... +..|.|.+||.+
T Consensus 307 ~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~------~~C~-----------~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 307 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP------DTCS-----------QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp TCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSS------SSCT-----------TTCCBCSSCBCCCCCSSCBC
T ss_pred CcccCCCCcEEeCCCCeEcCCCCcccCccccCCC------Cccc-----------cccccCCCCeeeeeeccccc
Confidence 56543 34799999998 77784 35421 0221 234332 457889999885
No 128
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=95.14 E-value=1.6 Score=54.74 Aligned_cols=43 Identities=21% Similarity=0.174 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHH-HHHHHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINNVIKSLTDIDTILTETA-GDLAKANDLKRKANL 1601 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~~~~L~~~~~~l~~~~-~~l~~a~~L~~~a~~ 1601 (1807)
..++.|...+.+-...++++...+.+.. -+.+-++.|.+-+..
T Consensus 22 ~G~~~L~~r~~~g~~~~~el~~f~keRa~iE~eYAk~L~kLakk 65 (486)
T 3haj_A 22 GNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARR 65 (486)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555666666555555555443322 222335555544443
No 129
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.10 E-value=0.0016 Score=65.66 Aligned_cols=50 Identities=30% Similarity=0.717 Sum_probs=31.9
Q ss_pred CcCC-CCccccCCCcc---cccccccCCCCcccCCCCCCCC-CCCCCCCCCCCCCccCCCC--ccccCCCcccC
Q psy2547 1042 CDRT-TGQCPCLPNVI---GVSCDRCLKNHWKIASGTGCEP-CDCDPIGSVDVTECNEYTG--QCQCKSGFGGR 1108 (1807)
Q Consensus 1042 C~~~-tG~C~C~~g~~---G~~C~~C~~g~~~~~~~~~C~~-c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~ 1108 (1807)
|... ...|.|++||. |..|.. ...|.. -+| .+ .|....| .|.|++||+|.
T Consensus 55 C~~~~~y~C~C~~Gy~~~~g~~C~d----------ideC~~~~~C--~~-----~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 55 CDPNTQASCECPEGYILDDGFICTD----------IDECENGGFC--SG-----VCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp ECTTSTTCEECCTTEEEETTTEEEE----------CCHHHHCSSC--SS-----EEEECSSSEEEEECSSSSCE
T ss_pred ccCCCCeEeECCCCccCCCCCcccc----------ccccCCCCCC--cC-----eEEeCCCCEEEECCCCCccC
Confidence 4442 34799999999 888853 233432 334 23 6765444 69999999863
No 130
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.95 E-value=0.014 Score=47.76 Aligned_cols=36 Identities=22% Similarity=0.475 Sum_probs=26.1
Q ss_pred CcCC---CCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 914 CRPC---PCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 914 C~~c---~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
|.+. ||.++ ++|......+.+.|.|++||+|.+|+.
T Consensus 3 C~~~~~~pC~ng--------g~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 3 XPSSYDGYCLNG--------GVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CTTCCSSCCSSS--------CEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred cccCCCCCCCCC--------CEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 5555 77765 688632233568999999999999983
No 131
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.95 E-value=0.017 Score=45.57 Aligned_cols=36 Identities=28% Similarity=0.702 Sum_probs=28.4
Q ss_pred CCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 912 IPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 912 ~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
+.|.+.||.++ ++|.... +.+.|.|++||+|.+|+.
T Consensus 4 d~C~~~pC~ng--------g~C~~~~--~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNG--------GSCKDDI--NSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CTTTTCCCCTT--------CEEEEET--TEEEEECCTTCCSTTSCC
T ss_pred ccCCCCCCCCC--------CEeEcCC--CceEeECCCCCcCCccCC
Confidence 56877888876 6886543 468999999999999973
No 132
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=94.94 E-value=7.3 Score=47.58 Aligned_cols=22 Identities=5% Similarity=0.277 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1674 ERLKSIQAGFLQNGRSAMDVEN 1695 (1807)
Q Consensus 1674 ~~le~lk~~l~~~~~~~~~a~~ 1695 (1807)
..|+..++.+......++.++.
T Consensus 134 ~~lekaKk~Y~~~cke~e~A~~ 155 (406)
T 4dyl_A 134 QDIEKLKSQYRALARDSAQAKR 155 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444434443333
No 133
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=94.92 E-value=1.5 Score=51.18 Aligned_cols=23 Identities=9% Similarity=0.141 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1664 ETNVKVKLLQERLKSIQAGFLQN 1686 (1807)
Q Consensus 1664 ~~e~~l~~l~~~le~lk~~l~~~ 1686 (1807)
.+...+......++..+..+...
T Consensus 125 k~~k~~~~~~~~l~kaKk~Y~~~ 147 (290)
T 3i2w_A 125 KAQKPWAKLLAKVEKAKADYHSA 147 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444433
No 134
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=94.88 E-value=1.8 Score=47.96 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQES----ELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~----~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
...++.++.+.+.+..++.....++..+...-..+.. ..+.+...+..|..+-+.+...+.
T Consensus 151 ~~~ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l~~rW~~l~~~l~ 215 (218)
T 3fb2_A 151 LDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMI 215 (218)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444445544444444444333332222221 122344444444444444444443
No 135
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=94.87 E-value=0.019 Score=68.38 Aligned_cols=75 Identities=27% Similarity=0.669 Sum_probs=47.6
Q ss_pred CCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy2547 912 IPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG----CLDNYFGNPQERGGSCEPCDCSNNTDLALP 987 (1807)
Q Consensus 912 ~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~----C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~ 987 (1807)
+.|.+-||.++ ++|.... +.+.|.|++||+|..|+. |..+- .
T Consensus 6 ~~C~~~pC~~~--------g~C~~~~--~~~~C~C~~g~~g~~C~~~~~eC~~~~------------------------~ 51 (317)
T 3h5c_B 6 SPCISQPCLHN--------GSCQDSI--WGYTCTCSPGYEGSNCELAKNECHPER------------------------T 51 (317)
T ss_dssp CCTTSCCCTTT--------CCCCCCS--SSCCCCCSSSCCSSSSCCCSSSCCTTC------------------------T
T ss_pred CcCCCCCCCCC--------CEeECCC--CCeEEECCCCCcCCccccCcccCCCCC------------------------C
Confidence 56777888765 6786443 458999999999999972 32210 0
Q ss_pred CCccCCCcccccCCCCCCCCCCCcccCCCCCCcccCCCCC
Q psy2547 988 GNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTE 1027 (1807)
Q Consensus 988 ~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~~~C~~ 1027 (1807)
+.|.. .|.+...++.| .|++||.|......|.+
T Consensus 52 ~~C~~------~C~~~~g~~~C-~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 52 DGCQH------FCLPGQESYTC-SCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp TSCSS------EEECCSSSCEE-ECCTTEECCTTSSCCEE
T ss_pred CCCcC------ccccCCCeeEE-ecccccccccccccccc
Confidence 12222 24455566667 68888888655555543
No 136
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=94.86 E-value=1.2 Score=43.30 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1764 EAMFNSQESELTELSKNIAELQKRIQ 1789 (1807)
Q Consensus 1764 e~~i~~~e~~le~le~el~~L~~el~ 1789 (1807)
...+++.+.++.....+..=|+.+|+
T Consensus 76 ~~SLeD~E~k~n~aiErnalLE~El~ 101 (111)
T 2v66_B 76 IVSLEDFEQRLNQAIERNAFLESELD 101 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444
No 137
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=94.83 E-value=8.3 Score=45.22 Aligned_cols=31 Identities=0% Similarity=-0.123 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1664 ETNVKVKLLQERLKSIQAGFLQNGRSAMDVE 1694 (1807)
Q Consensus 1664 ~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~ 1694 (1807)
.+...+......++..+.++...-..++.++
T Consensus 147 k~~k~~~~~~~~l~KaK~~Y~~~c~e~e~a~ 177 (312)
T 3abh_A 147 KAQKPWAKKLKEVEAAKKAHHAACKEEKLAI 177 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444444444443444333
No 138
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=94.82 E-value=0.00095 Score=71.40 Aligned_cols=72 Identities=32% Similarity=0.696 Sum_probs=43.0
Q ss_pred ceeeecCCCCc-CCCCCCCCC--------------CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCccCCCcccccCCCCC
Q psy2547 941 DVICECKEGYR-GTRCDGCLD--------------NYFGNPQERGGSCEPC-DCSNNTDLALPGNCDTLTGKCLQCRYDT 1004 (1807)
Q Consensus 941 ~~~C~C~~g~~-G~~Ce~C~~--------------g~~g~p~~~~~~C~~C-~C~~~~~~~~~~~C~~~tG~C~~C~~~~ 1004 (1807)
.+.|.|++||+ |..|+.|.. ||.|++.. ..|+.= .|.. .+..|.. |. |....
T Consensus 74 ~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~--~~c~dideC~~-----~~~~C~~--g~---C~n~~ 141 (162)
T 1uzk_A 74 KASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPIT--VILEDIDECQE-----LPGLCQG--GK---CINTF 141 (162)
T ss_dssp HHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTT--CCEEECCHHHH-----CGGGGBT--SE---EEECS
T ss_pred CceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCC--CccCccccccC-----CCCCcCC--CE---eEcCC
Confidence 57899999998 888886643 77776522 122210 0100 0123431 33 44556
Q ss_pred CCCCCCcccCCCCCCcccCCC
Q psy2547 1005 EGDHCQVCKAGFFGNALEQNC 1025 (1807)
Q Consensus 1005 ~G~~C~~C~~G~~G~~~~~~C 1025 (1807)
.+++| .|++||.|+...+.|
T Consensus 142 gsy~C-~C~~Gy~g~~d~~~C 161 (162)
T 1uzk_A 142 GSFQC-RCPTGYYLNEDTRVC 161 (162)
T ss_dssp SCEEE-ECCTTCCBCTTTCBB
T ss_pred CCEEe-eCCCCccCCCCCCcc
Confidence 67788 899999997655544
No 139
>4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} PDB: 4g0h_A
Probab=94.81 E-value=1.5 Score=52.17 Aligned_cols=7 Identities=29% Similarity=0.582 Sum_probs=2.6
Q ss_pred HHHHHHH
Q psy2547 1284 LTEEIKK 1290 (1807)
Q Consensus 1284 L~~el~~ 1290 (1807)
.+.||..
T Consensus 426 fqteie~ 432 (876)
T 4dvy_P 426 FQNEIED 432 (876)
T ss_dssp THHHHHH
T ss_pred HHHHHhh
Confidence 3333333
No 140
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=94.74 E-value=3 Score=46.16 Aligned_cols=12 Identities=0% Similarity=0.227 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINN 1570 (1807)
Q Consensus 1559 ~~I~~l~~~i~~ 1570 (1807)
+.++.+..+...
T Consensus 34 ~~v~~l~~k~~~ 45 (218)
T 3edu_A 34 DHVTLLRDKFRD 45 (218)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 141
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=94.74 E-value=0.33 Score=49.47 Aligned_cols=6 Identities=33% Similarity=0.634 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy2547 1784 LQKRIQ 1789 (1807)
Q Consensus 1784 L~~el~ 1789 (1807)
|+.+|.
T Consensus 117 Ld~EIa 122 (131)
T 3tnu_A 117 LEQEIA 122 (131)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 142
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=94.72 E-value=0.71 Score=56.40 Aligned_cols=17 Identities=29% Similarity=0.530 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy2547 1774 LTELSKNIAELQKRIQS 1790 (1807)
Q Consensus 1774 le~le~el~~L~~el~~ 1790 (1807)
++.+..+|..|+..+..
T Consensus 177 ~~~l~~ki~~l~~~~~~ 193 (464)
T 1m1j_B 177 IDSLHKKIQKLENAIAT 193 (464)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444433
No 143
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.66 E-value=0.0067 Score=62.49 Aligned_cols=67 Identities=36% Similarity=0.971 Sum_probs=18.7
Q ss_pred CCCCCCCCCCCCCCCCCCCccCCCC--ccccCCCcccCCCCc-----CCCCccCCCCCCCccCCCCCCCCCCCccccCC-
Q psy2547 1073 GTGCEPCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQ-----CQTNFWGNPNVECFPCDCDPSGSATSQCHQNN- 1144 (1807)
Q Consensus 1073 ~~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~-----C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~t- 1144 (1807)
...|.+.+|.+.| +|....| .|.|++||+|..|+. |..+ ++.|.. .|....
T Consensus 42 ~d~C~~~pC~n~g-----~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~----------~~~C~~------~C~~~~g 100 (134)
T 2vh0_B 42 GDQCETSPCQNQG-----KCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD----------NGDCDQ------FCHEEQN 100 (134)
T ss_dssp --------------------------------------------CCGGGTG----------GGGCSS------EEEEETT
T ss_pred cCcCCCCCCCCcC-----CcccCCCCEEeeCCCCccCCccccCCCCccccC----------CCCCCC------EeECCCC
Confidence 3467777787766 7865544 799999999999863 4321 122222 454433
Q ss_pred -ceEeccCCcc----ccCCCc
Q psy2547 1145 -GTCVCHQGIG----GVRCDT 1160 (1807)
Q Consensus 1145 -G~C~C~~g~~----G~~C~~ 1160 (1807)
..|.|++||+ |..|..
T Consensus 101 ~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 101 SVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp EEEEECCTTEEECTTSSCEEE
T ss_pred CEEEECCCCcEECCCCCccCc
Confidence 4799999999 888864
No 144
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=94.63 E-value=0.012 Score=50.13 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCCCCCCCCCcc------CC-CCccccCCCcccCCCCc
Q psy2547 1073 GTGCEPCDCDPIGSVDVTECN------EY-TGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1073 ~~~C~~c~C~~~gs~~~~~C~------~~-tg~C~C~~g~~G~~C~~ 1112 (1807)
...|.+-+|.++| +|. .. ...|.|++||+|.+|+.
T Consensus 8 ~~eC~s~pC~NgG-----tC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 8 CAEKEKTFCVNGG-----ECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCSTTTTTSCTTC-----EEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcCCCCCCCC-----CcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 3568888899988 883 22 33799999999999985
No 145
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.61 E-value=0.0051 Score=63.41 Aligned_cols=68 Identities=31% Similarity=0.800 Sum_probs=19.2
Q ss_pred CCCCCCcCCCCCCCCCCCCCcCCCC--ccccCCCcccccccccCCCCcccCCC-CCCCC--CCCCCCCCCCCCCccCCCC
Q psy2547 1023 QNCTECTCNILGIDHSKGPCDRTTG--QCPCLPNVIGVSCDRCLKNHWKIASG-TGCEP--CDCDPIGSVDVTECNEYTG 1097 (1807)
Q Consensus 1023 ~~C~~C~C~~~g~~~~~~~C~~~tG--~C~C~~g~~G~~C~~C~~g~~~~~~~-~~C~~--c~C~~~gs~~~~~C~~~tg 1097 (1807)
+.|.+-+|.++| .|....| .|.|++||+|..|+. .. ..|.. ..|.+ .|....|
T Consensus 43 d~C~~~pC~n~g------~C~~~~~~y~C~C~~G~~G~~C~~---------~i~d~C~~~~~~C~~-------~C~~~~g 100 (134)
T 2vh0_B 43 DQCETSPCQNQG------KCKDGLGEYTCTCLEGFEGKNCEL---------FTRKLCSLDNGDCDQ-------FCHEEQN 100 (134)
T ss_dssp -----------------------------------------------------CCGGGTGGGGCSS-------EEEEETT
T ss_pred CcCCCCCCCCcC------CcccCCCCEEeeCCCCccCCcccc---------CCCCccccCCCCCCC-------EeECCCC
Confidence 457666787765 4655444 899999999999974 01 22432 23332 5655444
Q ss_pred --ccccCCCcc----cCCCCc
Q psy2547 1098 --QCQCKSGFG----GRQCDQ 1112 (1807)
Q Consensus 1098 --~C~C~~g~~----G~~C~~ 1112 (1807)
.|.|++||+ |..|..
T Consensus 101 ~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 101 SVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp EEEEECCTTEEECTTSSCEEE
T ss_pred CEEEECCCCcEECCCCCccCc
Confidence 699999999 887753
No 146
>2bsg_A Fibritin; viral protein, attachment protein, bacteriophage assembly, chaperone, coiled coil, structural protein; 15.00A {Bacteriophage T4}
Probab=94.57 E-value=0.022 Score=68.40 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1761 NETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1761 ~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
+++..+|.....++..++..+..++.++..+
T Consensus 424 K~~~t~i~~~~~~i~t~~~~~~~~~~~~~al 454 (487)
T 2bsg_A 424 KANETNIASVTQEVNTAKGNISSLQGDVQAL 454 (487)
T ss_pred hhhhhhhhhcccccchhhcccccccchhhHH
Confidence 3444444444444444444444444444443
No 147
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=94.50 E-value=3.7 Score=45.43 Aligned_cols=23 Identities=0% Similarity=-0.019 Sum_probs=11.2
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhh
Q psy2547 1553 NIQSNPEQIRERANEINNVIKSL 1575 (1807)
Q Consensus 1553 ~i~~~~~~I~~l~~~i~~~~~~L 1575 (1807)
++|.+...++.+..+-..+...|
T Consensus 40 e~~~d~~~ve~ll~~H~~l~~ei 62 (218)
T 3fb2_A 40 ELAKDVTGAEALLERHQEHRTEI 62 (218)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 34444555555555544444444
No 148
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=94.50 E-value=0.0045 Score=62.28 Aligned_cols=84 Identities=23% Similarity=0.447 Sum_probs=48.9
Q ss_pred CcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCC---CCCCCCCC
Q psy2547 838 GQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDP---RLGIDIPC 914 (1807)
Q Consensus 838 g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~---~~~~~~~C 914 (1807)
..|.|++||+|..++. ..|.. .|.++ .|. +. |.. +.++.| .|++||.+++ +. ..+.|
T Consensus 24 y~C~C~~Gy~g~~~~~--------~~C~~-~C~~~--~C~---~~---C~~-~~~y~C-~C~~Gy~~~~g~~C~-dideC 83 (118)
T 1dx5_I 24 YLCVCAEGFAPIPHEP--------HRCQM-FCNQT--ACP---AD---CDP-NTQASC-ECPEGYILDDGFICT-DIDEC 83 (118)
T ss_dssp EEEECCTTEEEETTEE--------EEEEE-CCCSS--EEE---CE---ECT-TSTTCE-ECCTTEEEETTTEEE-ECCHH
T ss_pred EEeECCCCccccCCCC--------Ccccc-ccCCC--CCC---Cc---ccC-CCCeEe-ECCCCccCCCCCccc-ccccc
Confidence 4699999999986531 11221 12211 222 22 333 467778 6888888443 21 23455
Q ss_pred cC-CCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCC
Q psy2547 915 RP-CPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGT 953 (1807)
Q Consensus 915 ~~-c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~ 953 (1807)
.. -+| + ++|.... +.+.|.|++||+|.
T Consensus 84 ~~~~~C-~---------~~C~n~~--g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 84 ENGGFC-S---------GVCHNLP--GTFECICGPDSALA 111 (118)
T ss_dssp HHCSSC-S---------SEEEECS--SSEEEEECSSSSCE
T ss_pred CCCCCC-c---------CeEEeCC--CCEEEECCCCCccC
Confidence 44 445 1 5676443 46999999999874
No 149
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=94.49 E-value=9.5 Score=44.36 Aligned_cols=12 Identities=8% Similarity=0.321 Sum_probs=6.0
Q ss_pred HHHHHHHHHHhh
Q psy2547 1522 SNITKQLDEFLN 1533 (1807)
Q Consensus 1522 ~~l~~~lk~~l~ 1533 (1807)
..+.+.+.+|+.
T Consensus 20 ~~~~~el~~f~k 31 (301)
T 2efk_A 20 LDLLDRYVKFVK 31 (301)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344455555553
No 150
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=94.37 E-value=7.5 Score=42.69 Aligned_cols=15 Identities=7% Similarity=0.096 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHhh
Q psy2547 1519 ASTSNITKQLDEFLN 1533 (1807)
Q Consensus 1519 ~~~~~l~~~lk~~l~ 1533 (1807)
.++..++..+...+.
T Consensus 13 ~~l~~Wl~~~e~~l~ 27 (216)
T 1u5p_A 13 KDFDFWLSEVEALLA 27 (216)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 344445555544443
No 151
>4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} PDB: 4g0h_A
Probab=94.28 E-value=12 Score=44.76 Aligned_cols=18 Identities=6% Similarity=0.132 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy2547 1662 SNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1662 l~~~e~~l~~l~~~le~l 1679 (1807)
|+.+...|+++...++++
T Consensus 692 lENiNknLkDf~ksfde~ 709 (876)
T 4dvy_P 692 LEKISKDLKDFSKSFDEF 709 (876)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcccchhh
Confidence 333333444443333333
No 152
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=94.25 E-value=1.3 Score=52.82 Aligned_cols=79 Identities=10% Similarity=0.100 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1641 ISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQN-----GRSAMDVENEEKNLEKEVALAQKQASGLR 1715 (1807)
Q Consensus 1641 i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~-----~~~~~~a~~~ae~a~~~a~~ae~~l~el~ 1715 (1807)
+..+...+..+...+..+...++.+......+...++.+...+... ...+..+...++.++..-.+++..++.+.
T Consensus 252 l~~~~~~~~~l~~~I~~Ai~al~~l~~~W~~m~~~~~~l~~~I~~~~~~i~~~~~~~i~~~L~~a~~~W~~l~~~a~~l~ 331 (346)
T 2nrj_A 252 VGVAYSNINEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHIENAAQKADQNKFKFLKPNLNAAKDSWKTLRTDAVTLK 331 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTTTGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3334444444445555555555555555555555555554444431 23344444556666666666666666655
Q ss_pred HHHH
Q psy2547 1716 SRYQ 1719 (1807)
Q Consensus 1716 ~~l~ 1719 (1807)
+.++
T Consensus 332 ~~~~ 335 (346)
T 2nrj_A 332 EGIK 335 (346)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 5444
No 153
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=94.24 E-value=0.01 Score=63.41 Aligned_cols=114 Identities=20% Similarity=0.529 Sum_probs=65.0
Q ss_pred ccCCCCcc----cCCCCcc---------cCCCCCCCCCCcCCCC---CCCcCCC--CCCCCCCCCcccCCCC-cccCCCC
Q psy2547 785 CDQLGGNC----VCKPNVV---------GRRCDRCAPGTYGFGP---EGCKACD--CNHVGALDNICDVVSG-QCKCRAQ 845 (1807)
Q Consensus 785 c~~~~g~C----~C~~~~~---------G~~C~~C~~g~~~~~~---~~C~~C~--C~~~g~~~~~C~~~~g-~C~C~~g 845 (1807)
.|+.+|.+ .|+||+. ...|..|.+|+|-... ..|.+|. |.........|..... +|.|++|
T Consensus 10 ~D~~t~~~~cC~~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC~C~~G 89 (171)
T 3urf_Z 10 YDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEG 89 (171)
T ss_dssp ECCCSSSCCEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEEEECCCSSSCCEEEECTT
T ss_pred cCCCCCCCCCCCCCCCCceecccCCCCCCCccccCCCCcEecCCCCCCccccCcCccCCCCEEeccCcCCCCccccCCCC
Confidence 44555533 6788775 4568889999986553 3588887 7654332334665543 5888888
Q ss_pred ccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCC
Q psy2547 846 TYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917 (1807)
Q Consensus 846 ~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c 917 (1807)
|+=. + ..|++|. .|.+..|.=..| ..+....|+.|++|||-+... ....|+|+
T Consensus 90 ~~~~-~----------~~C~~ct------~C~~G~~v~~~~-t~~~dt~C~~C~~Gtfs~~~s-s~~~C~p~ 142 (171)
T 3urf_Z 90 RYLE-I----------EFCLKHR------SCPPGFGVVQAG-TPERNTVCKRCPDGFFSNETS-SKAPCRKH 142 (171)
T ss_dssp EEEE-T----------TEEEECC------CBCTTEEEEECC-CSSSCCEEEECCTTEECSSCB-SSCCCEEC
T ss_pred cEEC-C----------ccCcccC------cCCCCceEeecC-ccCCCcccccCCCCcccCCCC-CCCccccC
Confidence 7631 1 1233321 222222221112 124566788899999987642 23567765
No 154
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=94.23 E-value=5.6 Score=43.60 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1777 LSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1777 le~el~~L~~el~~l 1791 (1807)
+...-..|...+...
T Consensus 190 l~~~w~~l~~~~~~R 204 (213)
T 1cun_A 190 LKGKVSDLEKAAAQR 204 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 155
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=94.17 E-value=0.57 Score=47.68 Aligned_cols=20 Identities=20% Similarity=0.453 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDA 1658 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~ 1658 (1807)
.+|.+++..|..++.+++.+
T Consensus 38 ~Ei~elrr~iq~L~~el~~l 57 (131)
T 3tnu_A 38 SEISELRRTMQNLEIELQSQ 57 (131)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 156
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=94.16 E-value=0.013 Score=62.40 Aligned_cols=14 Identities=29% Similarity=0.525 Sum_probs=9.9
Q ss_pred cCCCCCCCCCCcCC
Q psy2547 800 GRRCDRCAPGTYGF 813 (1807)
Q Consensus 800 G~~C~~C~~g~~~~ 813 (1807)
|.-|..|.||+|-.
T Consensus 13 ~~~C~~CppG~~~~ 26 (161)
T 1sg1_X 13 GECCKACNLGEGVA 26 (161)
T ss_dssp SCBCCCBCTTEEEE
T ss_pred CcCCCCCCcCCeEC
Confidence 45677888887753
No 157
>4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori}
Probab=94.11 E-value=11 Score=43.53 Aligned_cols=29 Identities=14% Similarity=0.329 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1504 YDHAASVRNKTAAYVASTSNITKQLDEFL 1532 (1807)
Q Consensus 1504 ~~~a~~~~~~~e~~~~~~~~l~~~lk~~l 1532 (1807)
++.++.+...++..+.+.+.|-+++..-+
T Consensus 349 y~~vkkaqkdlekslrkrehlekev~kkl 377 (569)
T 4dvz_A 349 YDEVKKAQKDLEKSLRKREHLEKEVEKKL 377 (569)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555544333
No 158
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=94.09 E-value=9 Score=43.27 Aligned_cols=16 Identities=6% Similarity=0.042 Sum_probs=7.1
Q ss_pred CHHHHHHHHHHHHHHH
Q psy2547 1557 NPEQIRERANEINNVI 1572 (1807)
Q Consensus 1557 ~~~~I~~l~~~i~~~~ 1572 (1807)
+...++.+.++...+.
T Consensus 46 dl~~v~~llkkh~~~~ 61 (250)
T 1quu_A 46 SLTEVRALLRKHEAFE 61 (250)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3444444444444333
No 159
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=94.06 E-value=1 Score=53.41 Aligned_cols=16 Identities=19% Similarity=-0.151 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHhh
Q psy2547 1783 ELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1783 ~L~~el~~l~~~I~~~ 1798 (1807)
.+..+|.+|+.+|..|
T Consensus 143 ~q~skIQRLE~dI~~q 158 (491)
T 1m1j_A 143 EQVVEMKRLEVDIDIK 158 (491)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 160
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=94.04 E-value=0.98 Score=53.53 Aligned_cols=16 Identities=19% Similarity=0.113 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1738 RGQMLLNKASQLSVNT 1753 (1807)
Q Consensus 1738 r~~~l~~~a~~l~~~~ 1753 (1807)
.++.+..++++|+..+
T Consensus 140 ~l~~q~skIQRLE~dI 155 (491)
T 1m1j_A 140 SIQEQVVEMKRLEVDI 155 (491)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 161
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=93.95 E-value=0.015 Score=62.10 Aligned_cols=36 Identities=28% Similarity=0.753 Sum_probs=24.7
Q ss_pred ecCCCCc---------CCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
Q psy2547 945 ECKEGYR---------GTRCDGCLDNYFGNPQERGGSCEPCD--CSN 980 (1807)
Q Consensus 945 ~C~~g~~---------G~~Ce~C~~g~~g~p~~~~~~C~~C~--C~~ 980 (1807)
.|++|+. ...|..|.+|+|-+.-.....|.+|. |..
T Consensus 22 ~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~ 68 (171)
T 3urf_Z 22 KCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKE 68 (171)
T ss_dssp CBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCT
T ss_pred CCCCCceecccCCCCCCCccccCCCCcEecCCCCCCccccCcCccCC
Confidence 7777764 35688899998866533346788886 654
No 162
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=93.94 E-value=0.66 Score=58.20 Aligned_cols=27 Identities=22% Similarity=0.382 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1758 KQLNETEAMFNSQESELTELSKNIAEL 1784 (1807)
Q Consensus 1758 ~~l~~Le~~i~~~e~~le~le~el~~L 1784 (1807)
+++++|+.+|.+++++|++++++|+++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666666666555554
No 163
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.88 E-value=0.61 Score=61.61 Aligned_cols=64 Identities=25% Similarity=0.686 Sum_probs=39.1
Q ss_pred CccccCCCCCceeeecCCCCc---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYR---GTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGD 1007 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~---G~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~ 1007 (1807)
..|...+ +.+.|.|++||. |..|+. ...|. . ++.|.. .|.....|+
T Consensus 306 ~~C~~~~--~~~~C~C~~G~~~~~~~~C~d------------ideC~-----~------~~~C~~------~C~n~~g~y 354 (699)
T 1n7d_A 306 HVCNDLK--IGYECLCPDGFQLVAQRRCED------------IDECQ-----D------PDTCSQ------LCVNLEGGY 354 (699)
T ss_dssp TTCCCCT--TCCCCCCCSSSCCCSSSCCCC------------CCCCS-----S------SSSCTT------TCCBCSSCB
T ss_pred CCcccCC--CCcEEeCCCCeEcCCCCcccC------------ccccC-----C------CCcccc------ccccCCCCe
Confidence 4565433 468899999998 666651 01121 0 122321 366667788
Q ss_pred CCCcccCCCCCCcccCCCC
Q psy2547 1008 HCQVCKAGFFGNALEQNCT 1026 (1807)
Q Consensus 1008 ~C~~C~~G~~G~~~~~~C~ 1026 (1807)
.| .|++||.+..-...|.
T Consensus 355 ~C-~C~~G~~~~~~~~~C~ 372 (699)
T 1n7d_A 355 KC-QCEEGFQLDPHTKACK 372 (699)
T ss_dssp CC-CCCSSCBCCSSCCCCB
T ss_pred ee-eeecccccCCCCCccc
Confidence 88 7999999876555554
No 164
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=93.88 E-value=0.018 Score=61.63 Aligned_cols=75 Identities=31% Similarity=0.714 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCCC-CCCCCCCC
Q psy2547 848 GRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCP-CPGTVESG 926 (1807)
Q Consensus 848 G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~-C~~~~~~~ 926 (1807)
|..|..|++|+|-...| .. ..+..|..|++|+|-+...+ ...|.+|. |+.+. |
T Consensus 13 ~~~C~~CppG~~~~~~C----------------------~~-~~~t~C~~Cp~GtY~~~~n~-~~~C~~C~~C~~~~--g 66 (167)
T 1jma_B 13 SECCPKCSPGYRVKEAC----------------------GE-LTGTVCEPCPPGTYIAHLNG-LSKCLQCQMCDPAM--G 66 (167)
T ss_dssp TBCCBCBCTTEEEEECC----------------------CS-SSCCEEEECCTTEECSSCBC-SSCCEECCCCCTTT--T
T ss_pred CcCCCCCCCCCEeccCC----------------------CC-CCCCcCCcCCCCccccccCc-CccccCCcccccCC--C
Confidence 55788888888764322 11 13346668899988764332 24577763 54310 1
Q ss_pred CccCCccccCCCCCceeeecCCCCc
Q psy2547 927 LSYADTCQLDPRSQDVICECKEGYR 951 (1807)
Q Consensus 927 ~~~~~~C~~~~~~~~~~C~C~~g~~ 951 (1807)
......|.. +.+-+|.|++||.
T Consensus 67 ~~~~~~Ct~---t~~t~C~C~~G~y 88 (167)
T 1jma_B 67 LRASRNCSR---TENAVCGCSPGHF 88 (167)
T ss_dssp EEEEECCCS---SSCCEEEECTTEE
T ss_pred eEEeccCCC---CCCCcccCCCCce
Confidence 111123432 2345678887774
No 165
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.88 E-value=1.1 Score=45.50 Aligned_cols=17 Identities=18% Similarity=0.495 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy2547 1640 DISAARKDLSQITNDLD 1656 (1807)
Q Consensus 1640 ~i~~~~~~l~~ie~~l~ 1656 (1807)
+|.+++..|..++.+++
T Consensus 37 Ei~elrr~iq~L~~el~ 53 (129)
T 3tnu_B 37 EISEMNRMIQRLRAEID 53 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 166
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=93.77 E-value=1.6 Score=41.80 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2547 1759 QLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKS 1799 (1807)
Q Consensus 1759 ~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~~ 1799 (1807)
++++|+.+|+.+.++|++++++++.|.++.+.+...|..+.
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~~~ 112 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 112 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHhhhcc
Confidence 35555566666666666666666666666665555554443
No 167
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=93.75 E-value=7.2 Score=42.83 Aligned_cols=26 Identities=19% Similarity=0.113 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKLKQLN 1761 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~~~l~ 1761 (1807)
...++.++.+.+.+..++......+.
T Consensus 141 l~~v~~ll~kh~~~~~el~~~~~~i~ 166 (216)
T 1u5p_A 141 LTGVQNLRKKHKRLEAELAAHEPAIQ 166 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 33444444444444444444444433
No 168
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=93.72 E-value=0.012 Score=65.28 Aligned_cols=28 Identities=14% Similarity=0.358 Sum_probs=17.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q psy2547 952 GTRCDGCLDNYFGNPQERGGSCEPCD-CS 979 (1807)
Q Consensus 952 G~~Ce~C~~g~~g~p~~~~~~C~~C~-C~ 979 (1807)
...|..|.+|+|-+.-.....|.+|. |.
T Consensus 64 ~t~C~pC~~gtY~~~~n~~~~C~~C~~C~ 92 (216)
T 3me4_A 64 DSVCLPCGPDEYLDTWNEEDKCLLHKVCD 92 (216)
T ss_dssp CCEEEECCTTEECCSSBCCSSCEECCCCC
T ss_pred CCccccCCCCCeecCCCCCCcCCCCCCCC
Confidence 34687888888865432235677764 44
No 169
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=93.69 E-value=3.4 Score=45.46 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1661 KSNETNVKVKLLQERLKSIQAGFLQ 1685 (1807)
Q Consensus 1661 ~l~~~e~~l~~l~~~le~lk~~l~~ 1685 (1807)
.|.++..++..|-.++.+++..+..
T Consensus 63 dl~DIsdklgvLl~e~ge~e~~~a~ 87 (234)
T 3plt_A 63 DVSDVTDKLGVLIYELGELQDQFID 87 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555445444444433
No 170
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=93.67 E-value=0.024 Score=46.47 Aligned_cols=27 Identities=30% Similarity=0.758 Sum_probs=20.5
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|......+.+.|.|++||+|.+||.
T Consensus 17 G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 17 GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 477543323468999999999999984
No 171
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=93.66 E-value=0.052 Score=64.43 Aligned_cols=133 Identities=21% Similarity=0.468 Sum_probs=71.0
Q ss_pred eeEEEeccceeEEEEEEEEEc--C-CCC-CcEEEEEecCCCCCccchhhhHhhhhhhCCCCCCCCCCCCCcccccc---c
Q psy2547 126 VTIQLDMEAEFHFTHLIIYFK--T-FRP-AAMLIERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRKLTDVYCES---R 198 (1807)
Q Consensus 126 v~i~l~l~~~f~~~~~~~~f~--s-~rP-~~~~iers~d~g~~w~~~qy~a~~C~~~f~~~~~~~~~~~~~~~c~~---~ 198 (1807)
+|-.|++..-+-|.+- |.+. + ..| ....||.|+|+|.+|...+. .| +|..+. .-|+. .
T Consensus 71 ~T~~l~v~~g~~lQF~-l~~GC~~~~s~~~~V~LeYStd~G~sW~~v~~---~c---~P~~~~--------~~C~~~~~~ 135 (387)
T 2ddu_A 71 VTRDLTLKPGYVLQFK-LNIGCTSQFSSTAPVLLQYSHDAGMSWFLVKE---GC---FPASAG--------KGCEGNSRE 135 (387)
T ss_dssp ----CCCCTTCEEEEE-EBSSSCSSCCSSCCEEEEEESSTTSCCEESCC---CB---CTTCCS--------SSSCTTSCC
T ss_pred EeeeEecCCCcEEEEE-EEccCCCCCCCCCcEEEEEEeCCCcceEeeec---cc---ccCCCC--------ccccccccc
Confidence 4555566554433322 2342 1 123 67899999999999998774 34 332111 23542 1
Q ss_pred CC---CCCC--C-CCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeeecccccCCCccccccccccceeeEEeece
Q psy2547 199 YS---SNNP--S-SGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKYYYAITQM 272 (1807)
Q Consensus 199 ~s---~~~p--~-~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~~~~~t~~~~~~~~~~~~~~~~~yai~~~ 272 (1807)
|. ...+ + .--.|.+.+ |++ +.-++.|+|..+....+. ....+||-+|
T Consensus 136 ~~~~si~~a~~~~~W~riti~l-P~~----------------~~s~~TrFRW~Q~~~~~~----------~~~~WAlD~v 188 (387)
T 2ddu_A 136 LSEPTVYYTGDFEEWTRITIAI-PRS----------------LASSKTRFRWIQESSSQK----------NVPPFGLDGV 188 (387)
T ss_dssp CBCCSEECTTSCSSCEEEEEEC-CGG----------------GCSSCCEEEEECC----------------CCCCBCCCC
T ss_pred ccCcceeccccccCceEEEEEC-Chh----------------hcCCcceEEEEcccCCcc----------cCcceeEeeE
Confidence 11 0011 1 122444433 322 112346677655432211 2347899999
Q ss_pred eeeecc--ccccCccccccCCCCCCCCCCccccccCCCCCCCC
Q psy2547 273 IVRGSC--SCYGHASRCLPISEADTKPDMVHGRCECTHNTQGL 313 (1807)
Q Consensus 273 ~v~g~C--~C~gha~~C~~~~~~~~~~~~~~~~C~C~hnt~G~ 313 (1807)
-|+-.| .|+||.. |+ .|+|.|..++.|.
T Consensus 189 yIg~~Cp~~CsGhG~-C~------------~g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 189 YISEPCPSYCSGHGD-CI------------SGVCFCDLGYTAA 218 (387)
T ss_dssp EEESCCGGGGGGSEE-EE------------TTEEEECTTEEEE
T ss_pred EecccCccccCCCce-ec------------CCeEEecCCcccC
Confidence 999988 7999976 52 3689999999985
No 172
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=93.63 E-value=12 Score=43.96 Aligned_cols=23 Identities=9% Similarity=0.173 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHH
Q psy2547 1560 QIRERANEINNVIKSLTDIDTIL 1582 (1807)
Q Consensus 1560 ~I~~l~~~i~~~~~~L~~~~~~l 1582 (1807)
.++.|...+..-...++++...+
T Consensus 21 g~~~l~~~~~~g~~~~~el~~f~ 43 (320)
T 3m3w_A 21 NYRRTVQRVEDGHRLCGDLVSCF 43 (320)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555444444
No 173
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=93.59 E-value=2.3 Score=40.77 Aligned_cols=8 Identities=25% Similarity=0.314 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q psy2547 1742 LLNKASQL 1749 (1807)
Q Consensus 1742 l~~~a~~l 1749 (1807)
|+.+++.|
T Consensus 76 LqgEI~~L 83 (121)
T 3mq7_A 76 LEGEITTL 83 (121)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 174
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=93.56 E-value=0.0038 Score=65.50 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=9.7
Q ss_pred CCCCCCCcccCCCCCCcccC
Q psy2547 1004 TEGDHCQVCKAGFFGNALEQ 1023 (1807)
Q Consensus 1004 ~~G~~C~~C~~G~~G~~~~~ 1023 (1807)
..+++| .|++||.|+....
T Consensus 126 ~g~y~C-~C~~Gy~g~~~~~ 144 (147)
T 2w86_A 126 RGSFKC-QCPSGMTLDATGR 144 (147)
T ss_dssp TTEEEE-ECCTTCCBCTTSS
T ss_pred CCCEEe-eCCCCCccCCCCC
Confidence 344455 5666666554433
No 175
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=93.50 E-value=11 Score=41.40 Aligned_cols=12 Identities=8% Similarity=-0.067 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVN 1752 (1807)
Q Consensus 1741 ~l~~~a~~l~~~ 1752 (1807)
.++.+.+.+..+
T Consensus 144 ~llkkh~~f~~~ 155 (214)
T 1s35_A 144 AGIRKFEDFLGS 155 (214)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 176
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=93.45 E-value=15 Score=44.40 Aligned_cols=23 Identities=9% Similarity=0.200 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1773 ELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1773 ~le~le~el~~L~~el~~l~~~I 1795 (1807)
+++....++++...++.+...+|
T Consensus 232 ~l~~~r~~~~~~~~~~~~~~~~l 254 (385)
T 2q13_A 232 SVQNVRREMDSDIETMQQTIEDL 254 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 177
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=93.42 E-value=0.039 Score=69.31 Aligned_cols=79 Identities=19% Similarity=0.468 Sum_probs=49.3
Q ss_pred CCCccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceee--ecCCCC---cCC
Q psy2547 880 TGTCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVIC--ECKEGY---RGT 953 (1807)
Q Consensus 880 tg~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C--~C~~g~---~G~ 953 (1807)
...|..|++...+..|- .|++|||.++.. +.-+.+|.. ++.. ...| .|+.+| .+.
T Consensus 221 ~~~C~~C~~~~~~~~Cv~~Cp~g~y~~~~~-----~~~~~~p~~----------~~~~----~~~Cv~~Cp~~~~l~~~g 281 (501)
T 1mox_A 221 ESDCLVCRKFRDEATCKDTCPPLMLYNPTT-----YQMDVNPEG----------KYSF----GATCVKKCPRNYVVTDHG 281 (501)
T ss_dssp STTEEEESSEEETTEEESSCCCSEEEETTT-----TEEEECTTC----------CEEE----TTEEESSCCTTCEECTTS
T ss_pred CcccccccccCCCCcccccCCCCeeecCCc-----eEEecCCCc----------cccc----hhhhhcccCcccEeccCC
Confidence 45688999988889994 799999988742 221222221 0100 1245 588887 456
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCC
Q psy2547 954 RCD-GCLDNYFGNPQERGGSCEPCD 977 (1807)
Q Consensus 954 ~Ce-~C~~g~~g~p~~~~~~C~~C~ 977 (1807)
.|- .|++|||.+.......|++|.
T Consensus 282 ~Cv~~Cp~G~y~~~~~~~~~C~~C~ 306 (501)
T 1mox_A 282 SCVRACGADSYEMEEDGVRKCKKCE 306 (501)
T ss_dssp BEESSCCSSCCCBCSSSSCBCCCC-
T ss_pred EEeccCCCCCeecCCCCCCcCcCCC
Confidence 786 699999976422123688763
No 178
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=93.39 E-value=0.021 Score=61.48 Aligned_cols=36 Identities=22% Similarity=0.539 Sum_probs=24.8
Q ss_pred ecCCCCc---------CCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
Q psy2547 945 ECKEGYR---------GTRCDGCLDNYFGNPQERGGSCEPCD--CSN 980 (1807)
Q Consensus 945 ~C~~g~~---------G~~Ce~C~~g~~g~p~~~~~~C~~C~--C~~ 980 (1807)
.|++|+. ...|..|.+|+|-+--.....|.+|. |..
T Consensus 24 ~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~ 70 (176)
T 3k51_B 24 QCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGE 70 (176)
T ss_dssp CBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCS
T ss_pred CCCCCceeCccCCCCCCCccccCCCCCeecCCCCCCcCccccCcCCC
Confidence 7888875 45688899998865432235788885 643
No 179
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=93.31 E-value=0.066 Score=45.33 Aligned_cols=38 Identities=26% Similarity=0.618 Sum_probs=27.6
Q ss_pred CCCcCC---CCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 912 IPCRPC---PCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 912 ~~C~~c---~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
+.|.+. ||.++ ++|......+.+.|.|++||+|.+|+.
T Consensus 4 ~~C~~~~~~pC~ng--------g~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 4 PGCPSSYDGYCLNG--------GVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp CCCCTTSSCSSCSS--------CEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred ccCCCCCCCcCCCC--------cEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 456665 77765 688632223468999999999999985
No 180
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=93.19 E-value=0.041 Score=54.86 Aligned_cols=59 Identities=29% Similarity=0.695 Sum_probs=34.7
Q ss_pred CCCCCCCCCCCccCCCC--ccccCCCcccCCCCcCCCCccCCCCCCCc--cCCCCCCCCCCCccccC--CceEeccCCcc
Q psy2547 1081 CDPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQCQTNFWGNPNVECF--PCDCDPSGSATSQCHQN--NGTCVCHQGIG 1154 (1807)
Q Consensus 1081 C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~C~~g~~g~~~~~C~--~C~C~~~gs~~~~C~~~--tG~C~C~~g~~ 1154 (1807)
|.+.| +|....| .|.|++||+|..|+.-.+- ..|. ...|. .+|... ...|.|++||+
T Consensus 22 C~~~g-----~C~~~~~~y~C~C~~G~~G~~C~~~~~~------~~C~~~~~~C~------~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 22 CCGHG-----TCIDGIGSFSCDCRSGWEGRFCQREVSF------LNCSLDNGGCT------HYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp TTTSE-----EECCCSSCCCEEECTTEESTTSCEECCS------SSSSSGGGGCS------SEEEECSSSEEEECCTTEE
T ss_pred CCCcC-----CCCCCCCCcEeeCCCCCcCCCcCcCCcC------CcCcCCCCCCC------CEeECCCCCEEeECCCCee
Confidence 55544 7765443 7999999999999742110 0111 11111 145433 34899999999
Q ss_pred cc
Q psy2547 1155 GV 1156 (1807)
Q Consensus 1155 G~ 1156 (1807)
|.
T Consensus 85 ~~ 86 (114)
T 1aut_L 85 LG 86 (114)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 181
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=93.18 E-value=0.012 Score=49.80 Aligned_cols=27 Identities=30% Similarity=0.620 Sum_probs=19.9
Q ss_pred CccccCC--CCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDP--RSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~--~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|.... ....+.|.|++||+|.+||.
T Consensus 20 GtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 20 AHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 6786421 12357999999999999984
No 182
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=93.14 E-value=14 Score=43.92 Aligned_cols=26 Identities=0% Similarity=-0.146 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSAMD 1692 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~~~ 1692 (1807)
..+......++..+.++...-..++.
T Consensus 150 k~~~~~~~~l~KaKk~Y~~~c~e~e~ 175 (350)
T 3aco_A 150 KPWAKKLKEVEAAKKAHHAACKEEKL 175 (350)
T ss_dssp SHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444443333333
No 183
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=93.14 E-value=1.5 Score=39.99 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1759 QLNETEAMFNSQESELTELSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1759 ~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~ 1794 (1807)
+.+++....+.+.++.+.+..+...++.+++.+...
T Consensus 42 e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 42 EVQNAQHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333444444444444444555555544443
No 184
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=93.12 E-value=15 Score=41.96 Aligned_cols=39 Identities=10% Similarity=0.172 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy2547 1762 ETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKSN 1800 (1807)
Q Consensus 1762 ~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~~~ 1800 (1807)
+++..++.+...++....+++...+++++..++|....+
T Consensus 221 ~~~p~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~~~~ 259 (265)
T 2q12_A 221 QLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASD 259 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 556666677777777777777777777777777766544
No 185
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=93.10 E-value=0.24 Score=52.39 Aligned_cols=82 Identities=15% Similarity=0.087 Sum_probs=55.8
Q ss_pred CCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCccccccCC
Q psy2547 42 PATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQSEN 121 (1807)
Q Consensus 42 p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs~~ 121 (1807)
|+..|||+|+ ++++||+-+... .. ..++++++|+ +..|+|.|..
T Consensus 6 ~~~~NlA~gk--~a~aSS~~~~~~-~~----------------------------~~~a~~AvDG-----n~~t~w~s~s 49 (158)
T 1k12_A 6 YTQENVAVRG--KATQSAQLRGEH-AA----------------------------NSEASNAIDG-----NRDSNFYHGS 49 (158)
T ss_dssp EEEEEGGGGS--EEEESCBCCSTT-GG----------------------------GCCGGGGGSS-----CCCCCGGGSC
T ss_pred CCcccccCCC--eeEECcccCCCC-cc----------------------------cCCccccCcC-----CCCCcccccc
Confidence 3467999987 789999865310 00 0145578985 4668898752
Q ss_pred -----CCcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEec
Q psy2547 122 -----GVENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSH 159 (1807)
Q Consensus 122 -----~~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~ 159 (1807)
...+--|++||++.|.|..|+|... +.|-..+-|+=|.
T Consensus 50 c~~T~~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~i~v~~ 96 (158)
T 1k12_A 50 CTHSSGQANPWWRVDLLQVYTITSVTITNRGDCCGERISGAEINIGQ 96 (158)
T ss_dssp SCCBCSCSSCEEEEEEEEEEEEEEEEEEECSSSCTTTTTTCEEEEES
T ss_pred EecCCCCCCCEEEEECCCceEEeEEEEEeCCCcCccccCCEEEEEEc
Confidence 3456689999999999999999974 3455555555443
No 186
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=93.08 E-value=5.7 Score=41.64 Aligned_cols=38 Identities=11% Similarity=0.241 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1759 QLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1759 ~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
.|+.....+..+++++.++.-+|.+|.+.-+....-|.
T Consensus 118 ~L~~q~~~~relERemnsLKPeL~qL~K~rD~yl~wL~ 155 (170)
T 3l4q_C 118 ELRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLT 155 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 33333334445555555666666666666655555444
No 187
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=93.00 E-value=15 Score=41.82 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1468 SKKLINEKEAKAEEVFRGITTA 1489 (1807)
Q Consensus 1468 a~~~l~~~~~~~~~l~~~~~~~ 1489 (1807)
....+...+.+++.+...+...
T Consensus 19 FR~~l~~~E~~~~~l~~~l~kl 40 (265)
T 2q12_A 19 TRSLLGVFEEDATAISNYMNQL 40 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555544444443
No 188
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=92.88 E-value=0.096 Score=65.09 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=57.7
Q ss_pred CCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEc---CCCCCcEEEEEecCCCCCccchh
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFK---TFRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~---s~rP~~~~iers~d~g~~w~~~q 169 (1807)
|.+++++|+ +..|||.+..+...-.|+|||++...|..|+|+.. .-|-.++.||-|.| |.+|++.-
T Consensus 368 ~~~~~a~Dg-----n~~TyW~a~~~~~~~~l~idLg~~~~~n~v~IqE~i~~gqRV~~y~Ve~~~d-gg~W~~va 436 (478)
T 3ues_A 368 AAAAHLVDG-----NRDTFWRPDADDAAPAITLTLPQPTTINAIVIEEAIEHGQRIEHLRVTGALP-DGTERVLG 436 (478)
T ss_dssp GGGGGGSSS-----CTTCCBCCCTTCSSCEEEEEEEEEEEEEEEEEEECGGGCCCEEEEEEEEECT-TSCEEEEE
T ss_pred cChhhcccC-----CCCceEeCCCCCCCeeEEEECCCCcEEEEEEEeecccCCCceEEEEEEEEeC-CCCEEEEE
Confidence 788899985 57899999988878899999999999999999975 67889999999988 77998753
No 189
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=92.77 E-value=0.019 Score=63.86 Aligned_cols=25 Identities=28% Similarity=0.682 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC
Q psy2547 952 GTRCDGCLDNYFGNPQERGGSCEPC 976 (1807)
Q Consensus 952 G~~Ce~C~~g~~g~p~~~~~~C~~C 976 (1807)
...|..|.+|+|-+.......|++|
T Consensus 147 Dt~C~~C~~GtFs~~~s~~~~C~p~ 171 (216)
T 3me4_A 147 DTVCTPCLLGFFSDVFSSTDKCKPW 171 (216)
T ss_dssp CCCEEECCTTEECCSCBSSCCCEEC
T ss_pred CCccccCCCceecCCCCCCCccccC
Confidence 4467788888887753333566665
No 190
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=92.73 E-value=0.11 Score=61.84 Aligned_cols=56 Identities=30% Similarity=0.666 Sum_probs=37.3
Q ss_pred CCCCccCCCCCcCCCCcccCCCCCCCCCCcC---CCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCC
Q psy2547 886 CRNSTDGENCERCINGYYGDPRLGIDIPCRP---CPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTR 954 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~---c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~ 954 (1807)
|.+...|+.| .|++||.|..+....+.|.+ -+|. ..|.... +.+.|.|++||+|..
T Consensus 19 C~~~~~~~~C-~C~~g~~g~~C~~~~~eC~~~~~~~C~----------~~C~~~~--g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 19 CQDSIWGYTC-TCSPGYEGSNCELAKNECHPERTDGCQ----------HFCLPGQ--ESYTCSCAQGYRLGE 77 (317)
T ss_dssp CCCCSSSCCC-CCSSSCCSSSSCCCSSSCCTTCTTSCS----------SEEECCS--SSCEEECCTTEECCT
T ss_pred eECCCCCeEE-ECCCCCcCCccccCcccCCCCCCCCCc----------CccccCC--CeeEEeccccccccc
Confidence 5555567777 68888887777655566765 3443 2565433 468999999998753
No 191
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=92.67 E-value=14 Score=40.39 Aligned_cols=7 Identities=14% Similarity=0.088 Sum_probs=2.7
Q ss_pred HHHHHHH
Q psy2547 1523 NITKQLD 1529 (1807)
Q Consensus 1523 ~l~~~lk 1529 (1807)
.++....
T Consensus 14 ~Wl~e~e 20 (213)
T 1cun_A 14 SWIKEKK 20 (213)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3444333
No 192
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=92.67 E-value=0.27 Score=55.78 Aligned_cols=17 Identities=12% Similarity=0.133 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy2547 1782 AELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1782 ~~L~~el~~l~~~I~~~ 1798 (1807)
+.+..++..+.+.+.+.
T Consensus 223 e~~~~~l~~~~e~~~~~ 239 (243)
T 2a01_A 223 ESFKVSFLSALEEYTKK 239 (243)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33444444444444433
No 193
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=92.59 E-value=0.068 Score=49.79 Aligned_cols=51 Identities=31% Similarity=0.771 Sum_probs=32.4
Q ss_pred CcCCC--CccccCCCcc--cccccccCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC--ccccCCCcccC
Q psy2547 1042 CDRTT--GQCPCLPNVI--GVSCDRCLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG--QCQCKSGFGGR 1108 (1807)
Q Consensus 1042 C~~~t--G~C~C~~g~~--G~~C~~C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~ 1108 (1807)
|.... ..|.|++||. |..|.. ...|. .-+|.+ | .|....| .|.|++||.|.
T Consensus 19 C~n~~g~y~C~C~~Gy~~~g~~C~d----------ideC~~~~~C~~-~-----~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 19 CINTDGSYRCECPFGYILAGNECVD----------TDECSVGNPCGN-G-----TCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp ECCCSSCCCEECCTTEEEETTEEEE----------CCGGGTCCTTSS-S-----CEEECSSSEEECCSSSSCCC
T ss_pred EEecCCCEEEECCCCeECCCCccCC----------cccccCCCCCCC-C-----EeECCCCCEEeECCCCeEeC
Confidence 54443 3899999997 888853 33453 334443 3 6765544 68888888764
No 194
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=92.58 E-value=0.9 Score=42.45 Aligned_cols=25 Identities=20% Similarity=0.330 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1644 ARKDLSQITNDLDDAQQKSNETNVK 1668 (1807)
Q Consensus 1644 ~~~~l~~ie~~l~~~e~~l~~~e~~ 1668 (1807)
++++|..+..+...++.++.++...
T Consensus 5 Lr~qi~~l~~e~~~l~~e~dn~~~~ 29 (86)
T 3swk_A 5 LRRQVDQLTNDKARVEVERDNLAED 29 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 195
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=92.57 E-value=0.029 Score=55.23 Aligned_cols=62 Identities=26% Similarity=0.666 Sum_probs=17.0
Q ss_pred ccccCCCCCceeeecCCCCcC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCC
Q psy2547 932 TCQLDPRSQDVICECKEGYRG---TRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDH 1008 (1807)
Q Consensus 932 ~C~~~~~~~~~~C~C~~g~~G---~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~ 1008 (1807)
+|.... +.+.|.|++||+| ..|+. ...|.. +..|. + .|.....++.
T Consensus 42 ~C~n~~--g~y~C~C~~Gy~g~~g~~C~d------------ideC~~-----------~~~C~---~---~C~n~~gsy~ 90 (107)
T 2w2n_E 42 VCNDLK--IGYECLCPDGFQLVAQRRCED------------IDECQD-----------PDTCS---Q---LCVNLEGGYK 90 (107)
T ss_dssp EEECCS--BSCEEECCTTCEEETTTEEEC---------------------------------------------------
T ss_pred EeEeCC--CCeEEECCCCccccCCCcccc------------ccccCC-----------CCCcC---C---eeecCCCCEE
Confidence 565433 4689999999998 56651 011110 01232 1 2556666778
Q ss_pred CCcccCCCCCCcccCCC
Q psy2547 1009 CQVCKAGFFGNALEQNC 1025 (1807)
Q Consensus 1009 C~~C~~G~~G~~~~~~C 1025 (1807)
| .|++||.|+.....|
T Consensus 91 C-~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 91 C-QCEEGFQLDPHTKAC 106 (107)
T ss_dssp -----------------
T ss_pred E-ECCCCceECCCCCcc
Confidence 8 699999887655444
No 196
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=92.57 E-value=3.6 Score=39.23 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2547 1756 KLKQLNETEAMFNSQESEL 1774 (1807)
Q Consensus 1756 ~~~~l~~Le~~i~~~e~~l 1774 (1807)
...++.+++.++.....+|
T Consensus 72 ~~dE~~Sl~~q~~~~~~qL 90 (96)
T 3q8t_A 72 LDDELKSVENQMRYAQMQL 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 197
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=92.56 E-value=3.4 Score=46.66 Aligned_cols=10 Identities=10% Similarity=-0.137 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q psy2547 1506 HAASVRNKTA 1515 (1807)
Q Consensus 1506 ~a~~~~~~~e 1515 (1807)
.++++.+++.
T Consensus 14 ~~~~Y~~q~~ 23 (243)
T 2a01_A 14 LATVYVDVLK 23 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334444333
No 198
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=92.38 E-value=1.4 Score=40.12 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1691 MDVENEEKNLEKEVALAQKQASGLRSRYQETD 1722 (1807)
Q Consensus 1691 ~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~ 1722 (1807)
..++.++..+...+..++.++++|+.+-..+.
T Consensus 9 eqLE~KIq~avdtI~lLqmEieELKekN~~L~ 40 (81)
T 2jee_A 9 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLS 40 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444433333
No 199
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=92.35 E-value=0.066 Score=49.89 Aligned_cols=24 Identities=33% Similarity=0.725 Sum_probs=18.0
Q ss_pred CccccCCCCCceeeecCCCCc--CCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYR--GTRCD 956 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~--G~~Ce 956 (1807)
++|.... +.+.|.|++||+ |..|+
T Consensus 17 g~C~n~~--g~y~C~C~~Gy~~~g~~C~ 42 (82)
T 1emn_A 17 GQCINTD--GSYRCECPFGYILAGNECV 42 (82)
T ss_dssp SEECCCS--SCCCEECCTTEEEETTEEE
T ss_pred CEEEecC--CCEEEECCCCeECCCCccC
Confidence 3675433 468999999997 88886
No 200
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=92.32 E-value=32 Score=43.85 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1773 ELTELSKNIAELQKR 1787 (1807)
Q Consensus 1773 ~le~le~el~~L~~e 1787 (1807)
+.+.+..+|..|+++
T Consensus 568 ~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 568 ESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444444444444
No 201
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=92.31 E-value=0.051 Score=69.02 Aligned_cols=61 Identities=23% Similarity=0.517 Sum_probs=45.1
Q ss_pred CCcCCCCccccCCCcc--cccccccCCCCcccCCC-CCCCCCCCCCCCCCCCCCccCCCCccccCCCccc
Q psy2547 1041 PCDRTTGQCPCLPNVI--GVSCDRCLKNHWKIASG-TGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGG 1107 (1807)
Q Consensus 1041 ~C~~~tG~C~C~~g~~--G~~C~~C~~g~~~~~~~-~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G 1107 (1807)
.+....|+|.|.+||. |..|..|++|||....+ ..|.+|+-+... -+.....|.|..||.-
T Consensus 257 ~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s------~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 257 EWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP------SPEGATSCECEEGFFR 320 (536)
T ss_dssp CBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC------CCTTCSSCEECTTCBC
T ss_pred CEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC------CCCCccEEEEeccccc
Confidence 4556689999999997 67899999999987655 459988654422 2233567999888763
No 202
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=92.24 E-value=1.4 Score=42.13 Aligned_cols=9 Identities=22% Similarity=0.213 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q psy2547 1741 MLLNKASQL 1749 (1807)
Q Consensus 1741 ~l~~~a~~l 1749 (1807)
-|+.++.-+
T Consensus 66 vLkaQv~IY 74 (110)
T 2v4h_A 66 VLKAQADIY 74 (110)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 203
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=92.22 E-value=18 Score=40.79 Aligned_cols=13 Identities=23% Similarity=0.335 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINNV 1571 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~ 1571 (1807)
++++.+..++..+
T Consensus 52 ~~Fe~~~~~f~~~ 64 (251)
T 2fic_A 52 EQFEQCVQNFNKQ 64 (251)
T ss_dssp CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444333
No 204
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=92.17 E-value=6.9 Score=38.02 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1746 ASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1746 a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
++.+..++..+..++..+...++.....-..+...+..+.++...+
T Consensus 56 le~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~~~~l~~Ek~~L 101 (107)
T 2no2_A 56 LESLKQELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSL 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444444444444433
No 205
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=92.14 E-value=1.5 Score=41.95 Aligned_cols=11 Identities=18% Similarity=0.332 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q psy2547 1614 QKIVDVLTEAR 1624 (1807)
Q Consensus 1614 ~~l~~~L~~a~ 1624 (1807)
+.+..+|..|+
T Consensus 27 ~~L~~~L~~AE 37 (110)
T 2v4h_A 27 EDLRQQLQQAE 37 (110)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 206
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=92.07 E-value=1.2 Score=41.52 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
..++..++..++.+..+++..+..-++++..+..+.+.++++.-.-..|+.+++.+.++|.
T Consensus 20 ~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~ 80 (86)
T 3swk_A 20 EVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA 80 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555565555555666666666666666666666666666666665554
No 207
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=91.98 E-value=1.4 Score=44.93 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I 1795 (1807)
+.++..+..++..+..++..+.+.++.+..++..+.-++..++.++..|+++-..+.+..
T Consensus 74 ~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RW 133 (152)
T 3a7p_A 74 QKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARW 133 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444455555555555555555555555555555555544444433
No 208
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=91.94 E-value=1.7 Score=38.73 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1709 KQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ 1770 (1807)
Q Consensus 1709 ~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~ 1770 (1807)
+++++++.+-..++.++...+..++..+.+-..++.+++.+.+.+.-|+.+|.++...|.++
T Consensus 7 ~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 7 MKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 34444444444444555555555555555556666666666666666666666665555443
No 209
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=91.94 E-value=0.4 Score=50.22 Aligned_cols=80 Identities=13% Similarity=-0.008 Sum_probs=57.4
Q ss_pred ccCCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCcccccc
Q psy2547 40 CYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQS 119 (1807)
Q Consensus 40 c~p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs 119 (1807)
-.|+..|||.|+ +.++||+-+. +++++++|+ +..|.|.|
T Consensus 11 ~~~~~~NlAlgk--~at~SS~~~~----------------------------------~~a~~AvDG-----n~~t~w~~ 49 (151)
T 2j1v_A 11 FNDGNLNIAYAK--PTTQSSVDYN----------------------------------GDPNRAVDG-----NRNGNFNS 49 (151)
T ss_dssp EETTEECTTTTC--CEEESCCCTT----------------------------------CCGGGGGSS-----CCCCCGGG
T ss_pred CCCCCccccCCC--CeeECCCCCC----------------------------------CCcCccEeC-----CCcCcccc
Confidence 356678999987 6788887431 123468885 34577776
Q ss_pred C-----CCCcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecC
Q psy2547 120 E-----NGVENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHD 160 (1807)
Q Consensus 120 ~-----~~~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d 160 (1807)
. ....+--|++||++.|.|..|+|... ..|-..+-|+=|.|
T Consensus 50 ~sct~t~~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~I~v~~~ 99 (151)
T 2j1v_A 50 GSVTHTRADNPSWWEVDLKKMDKVGLVKIYNRTDAETQRLSNFDVILYDN 99 (151)
T ss_dssp TCCCCCCSCTTCEEEEEEEEEEEEEEEEEEECCSSCGGGSCSEEEEEECT
T ss_pred cccccCCCCCCCEEEEECCCCeEcCEEEEEcCCCccccccCCEEEEEECC
Confidence 3 23456789999999999999999985 34667777777755
No 210
>2ap3_A Conserved hypothetical protein; structural genomics, tetra helix, PSI, protein structure INI midwest center for structural genomics; 1.60A {Staphylococcus aureus subsp} SCOP: a.24.27.1
Probab=91.92 E-value=1.9 Score=46.55 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1765 AMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1765 ~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
..++.......+++.++++..++...+
T Consensus 169 ~~y~~~~~~FN~yTk~yN~~~kek~~~ 195 (199)
T 2ap3_A 169 QNYKKLKEVSDKYTKVLNKVQKEKQDV 195 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 333333355555555555555555443
No 211
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=91.90 E-value=15 Score=40.43 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy2547 1774 LTELSKNIAELQKRIQSCINFIVDKSNNY 1802 (1807)
Q Consensus 1774 le~le~el~~L~~el~~l~~~I~~~~~~Y 1802 (1807)
++++...-..|...+..-...|.+....|
T Consensus 189 ~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 217 (218)
T 3edu_A 189 EQEVSAAWQALLDACAGRRTQLVDTADKF 217 (218)
T ss_dssp HHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333334444444444444444444333
No 212
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=91.89 E-value=0.093 Score=56.59 Aligned_cols=26 Identities=27% Similarity=0.593 Sum_probs=4.8
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy2547 951 RGTRCDGCLDNYFGNPQERGGSCEPC 976 (1807)
Q Consensus 951 ~G~~Ce~C~~g~~g~p~~~~~~C~~C 976 (1807)
....|+.|.+|+|-+.......|+||
T Consensus 119 ~dt~C~~C~~Gtfs~~~s~~~~C~p~ 144 (177)
T 3qd6_R 119 SDTICEPCPVGFFSNVSSAFEKCHPW 144 (177)
T ss_dssp CCCCCCC-------------------
T ss_pred CCCccccCCCCcccCCCCCCCcCcCc
Confidence 44578889999997653323456664
No 213
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=91.85 E-value=0.19 Score=65.24 Aligned_cols=66 Identities=20% Similarity=0.292 Sum_probs=55.0
Q ss_pred CCCccccccccCCCCCCccccccCCCC-----cceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCCcc-
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGV-----ENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKTWQ- 166 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~-----~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~w~- 166 (1807)
.|++++++|. +..|+|.|.... .+..|+|||++.+.|..|.|... ..+|..+-|+=|.| |.+|+
T Consensus 477 ~~~~~~a~DG-----~~~T~w~s~~~~~~~~~~~~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~S~D-g~~w~~ 550 (601)
T 1w8o_A 477 DGRASNVIDG-----NPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSLN-GTTWDG 550 (601)
T ss_dssp CCCGGGGGSS-----CTTCCEECCCSSTTCCCSCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEESS-SSSCEE
T ss_pred CCccceeeCC-----CCCCcEecCCCCCCCCCCCeEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEEECC-CCccce
Confidence 6899999996 456999887432 36899999999999999999874 34899999999998 99998
Q ss_pred ch
Q psy2547 167 VY 168 (1807)
Q Consensus 167 ~~ 168 (1807)
|+
T Consensus 551 ~v 552 (601)
T 1w8o_A 551 PV 552 (601)
T ss_dssp EE
T ss_pred ee
Confidence 45
No 214
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=91.75 E-value=0.25 Score=57.91 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=46.4
Q ss_pred CCCccccccccCCCCCCccccccC-----CCCcceeEEEeccceeEEEEEEEEEc---CCCCCcEEEEEec
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSE-----NGVENVTIQLDMEAEFHFTHLIIYFK---TFRPAAMLIERSH 159 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~-----~~~~~v~i~l~l~~~f~~~~~~~~f~---s~rP~~~~iers~ 159 (1807)
.+++++++|+ +..|+|.|. ....+-.|+|||++.+.|..|+|++. +.|...+-|+=|.
T Consensus 168 ~~~a~~AvDG-----~~~t~W~~~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~~d~~~~~~~~~~i~vs~ 233 (293)
T 3cqo_A 168 SGIAYNAIDG-----NQANNWEMASCTHTKNTMDPWWRMDLSQTHRVFSVKVTNRDSFEKRINGAEIRIGD 233 (293)
T ss_dssp TCCGGGGGSS-----CCCCSGGGTCCCCCCSEESCEEEEEEEEEEEEEEEEEECCSSSGGGGTTEEEEEES
T ss_pred CCCccccccC-----CCCCccccCccccCCCCCCCEEEEECCCeEEEeEEEEEccCccccccCCeEEEEec
Confidence 4788899995 466899874 23346789999999999999999997 6677888888853
No 215
>4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori}
Probab=91.66 E-value=23 Score=40.86 Aligned_cols=7 Identities=29% Similarity=0.776 Sum_probs=4.1
Q ss_pred HHHHHhh
Q psy2547 1527 QLDEFLN 1533 (1807)
Q Consensus 1527 ~lk~~l~ 1533 (1807)
-|++||+
T Consensus 318 likdfl~ 324 (569)
T 4dvz_A 318 LIKDFLS 324 (569)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4566664
No 216
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=91.61 E-value=0.1 Score=55.36 Aligned_cols=14 Identities=14% Similarity=0.593 Sum_probs=9.7
Q ss_pred cccccccCCCCccc
Q psy2547 1057 GVSCDRCLKNHWKI 1070 (1807)
Q Consensus 1057 G~~C~~C~~g~~~~ 1070 (1807)
...|..|++|+|..
T Consensus 115 dt~C~~C~~Gtfs~ 128 (161)
T 1sg1_X 115 NTVCEECPEGTYSD 128 (161)
T ss_dssp CCEEEECCTTEECC
T ss_pred CCcccCCCCCceeC
Confidence 45677788887754
No 217
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=91.58 E-value=1.5 Score=43.77 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy2547 1653 NDLDDAQQKSNETNVKV 1669 (1807)
Q Consensus 1653 ~~l~~~e~~l~~~e~~l 1669 (1807)
..+..++++++.++.+|
T Consensus 76 ~~~d~lekKl~~aq~kL 92 (158)
T 3tul_A 76 SVYDAATKKLTQAQNKL 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 218
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=91.52 E-value=5.7 Score=37.88 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1748 QLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAEL 1784 (1807)
Q Consensus 1748 ~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L 1784 (1807)
.+-.+......++-++.+++..++.++.-....+..|
T Consensus 57 ~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL 93 (96)
T 3q8t_A 57 QYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKL 93 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444444444444444444444444444444
No 219
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=91.50 E-value=1.5 Score=43.80 Aligned_cols=8 Identities=13% Similarity=0.198 Sum_probs=2.8
Q ss_pred HHHHHHHH
Q psy2547 1662 SNETNVKV 1669 (1807)
Q Consensus 1662 l~~~e~~l 1669 (1807)
+..+++++
T Consensus 78 ~d~lekKl 85 (158)
T 3tul_A 78 YDAATKKL 85 (158)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 220
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=91.39 E-value=0.035 Score=52.28 Aligned_cols=23 Identities=39% Similarity=0.930 Sum_probs=16.6
Q ss_pred ccccCCCCCceeeecCCCCc-----CCCCC
Q psy2547 932 TCQLDPRSQDVICECKEGYR-----GTRCD 956 (1807)
Q Consensus 932 ~C~~~~~~~~~~C~C~~g~~-----G~~Ce 956 (1807)
+|...+ +.+.|.|++||+ |..|+
T Consensus 17 ~C~n~~--g~y~C~C~~Gy~~~~~~g~~C~ 44 (86)
T 1lmj_A 17 QCVNTP--GDFECKCDEGYESGFMMMKNCM 44 (86)
T ss_dssp CEEEET--TEEEECCCSSEEECTTTSSSEE
T ss_pred EEECCC--CCEEeeCCCCcCccCCCCCccC
Confidence 675443 469999999998 55554
No 221
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.36 E-value=0.064 Score=68.13 Aligned_cols=60 Identities=23% Similarity=0.605 Sum_probs=44.3
Q ss_pred CccCCCCccccCCCcc--cCCCCcCCCCccCCCC--CCCccCCCCCCCCCCCccccCCceEeccCCccc
Q psy2547 1091 ECNEYTGQCQCKSGFG--GRQCDQCQTNFWGNPN--VECFPCDCDPSGSATSQCHQNNGTCVCHQGIGG 1155 (1807)
Q Consensus 1091 ~C~~~tg~C~C~~g~~--G~~C~~C~~g~~g~~~--~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G 1155 (1807)
.+..-+|+|.|.+||. |..|..|.+|||.... ..|.+|.-+... -+.....|.|..||.-
T Consensus 257 ~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s-----~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 257 EWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP-----SPEGATSCECEEGFFR 320 (536)
T ss_dssp CBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC-----CCTTCSSCEECTTCBC
T ss_pred CEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC-----CCCCccEEEEeccccc
Confidence 4545589999999996 6789999999998643 379999654422 2234568999998863
No 222
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=91.31 E-value=0.056 Score=58.09 Aligned_cols=107 Identities=21% Similarity=0.562 Sum_probs=57.7
Q ss_pred cCCCCcc---------cCCCCCCCCCCcCCCC---CCCcCCC--CCCCCCCCCcccCCCC-cccCCCCccCCCCCCCCCC
Q psy2547 793 VCKPNVV---------GRRCDRCAPGTYGFGP---EGCKACD--CNHVGALDNICDVVSG-QCKCRAQTYGRECDQCSPG 857 (1807)
Q Consensus 793 ~C~~~~~---------G~~C~~C~~g~~~~~~---~~C~~C~--C~~~g~~~~~C~~~~g-~C~C~~g~~G~~C~~C~~g 857 (1807)
.|+||+. ...|..|.+|+|-... ..|.+|. |...-..-..|..... +|.|++||+=. +
T Consensus 24 ~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~~~~Ct~tsdtvC~C~~G~~~~-~------ 96 (176)
T 3k51_B 24 QCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFFAH-A------ 96 (176)
T ss_dssp CBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCSSEEEEECCBTTBCCEEEECTTEEEE-T------
T ss_pred CCCCCceeCccCCCCCCCccccCCCCCeecCCCCCCcCccccCcCCCCCEEeccCcCCCCceeeccCCeeEC-C------
Confidence 5666665 4567889999885433 3588886 6542111234665543 58888887621 1
Q ss_pred CCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCCC
Q psy2547 858 YWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCP 918 (1807)
Q Consensus 858 ~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~ 918 (1807)
..|.+| ..|.+..|.=..|.. +....|+.|++|||-+... ....|+|+.
T Consensus 97 ----~~C~~~------s~C~pG~~v~~~~t~-~~Dt~C~~C~~GtFs~~~s-~~~~C~p~t 145 (176)
T 3k51_B 97 ----GFCLEH------ASCPPGAGVIAPGTP-SQNTQCQPCPPGTFSASSS-SSEQCQPHR 145 (176)
T ss_dssp ----TEEEEC------CCCCTTEEEEECCCS-SSCCEEEECCTTEECCSCS-SSCCCEECC
T ss_pred ----Cccccc------ccCCCCcEEeecCcc-cCCCccccCCCCcccCCCC-CCCcccCCC
Confidence 123332 122222222111111 3456788899999977532 235677654
No 223
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=91.28 E-value=0.039 Score=57.62 Aligned_cols=72 Identities=31% Similarity=0.837 Sum_probs=41.7
Q ss_pred CCCCcccCCCCCCccc-CCCCCCc-CCCC-CCCCCCCCCcCCCC-ccccCCCcc-------cccccccCCCCcccCCCCC
Q psy2547 1007 DHCQVCKAGFFGNALE-QNCTECT-CNIL-GIDHSKGPCDRTTG-QCPCLPNVI-------GVSCDRCLKNHWKIASGTG 1075 (1807)
Q Consensus 1007 ~~C~~C~~G~~G~~~~-~~C~~C~-C~~~-g~~~~~~~C~~~tG-~C~C~~g~~-------G~~C~~C~~g~~~~~~~~~ 1075 (1807)
..|..|++|+|-+... ..|.+|. |... |.. ....|..... .|.|++||. +..|..|++|+|...+...
T Consensus 38 t~C~~C~~gty~~~~~~~~C~~C~~C~~~~g~~-~~~~Ct~t~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtfs~~~~~~ 116 (146)
T 2hey_R 38 TVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSE-RKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQA 116 (146)
T ss_dssp CEEEECCTTEECCSCBSSCCEECCCCCGGGTEE-EEECCBTTBCCEEEECTTEEESCSSSTTSSEEECCTTEECCSTTCC
T ss_pred CCcccCCCCCEECCCCCCcCcccCCCCCCCCce-EeccCccCCCccccCCCCeeeCCCcccCcccccCCCCcccCCCCCC
Confidence 4556788888865432 4566663 5542 210 0013444332 689999974 3467788888886544445
Q ss_pred CCCC
Q psy2547 1076 CEPC 1079 (1807)
Q Consensus 1076 C~~c 1079 (1807)
|++|
T Consensus 117 C~~~ 120 (146)
T 2hey_R 117 CKPW 120 (146)
T ss_dssp CEEC
T ss_pred CcCC
Confidence 6555
No 224
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=91.24 E-value=1.2 Score=40.43 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1709 KQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ 1770 (1807)
Q Consensus 1709 ~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~ 1770 (1807)
.++++++.+-..++.++..++..++..+.+-..++.+++.+.+.+.-|+.+|.++...|.++
T Consensus 13 ~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL 74 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARL 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 33444444444444444444444555555555566666666666666666666555555443
No 225
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=91.05 E-value=0.11 Score=40.73 Aligned_cols=34 Identities=32% Similarity=0.852 Sum_probs=26.2
Q ss_pred CCCCCCCCCCCCCCCCCCccCCCC--ccccCCCcccCCCCc
Q psy2547 1074 TGCEPCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1074 ~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~~ 1112 (1807)
..|.+.+|.+.| +|....+ .|.|++||+|.+|+.
T Consensus 4 d~C~~~pC~ngg-----~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNGG-----SCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CTTTTCCCCTTC-----EEEEETTEEEEECCTTCCSTTSCC
T ss_pred ccCCCCCCCCCC-----EeEcCCCceEeECCCCCcCCccCC
Confidence 457777788766 7865444 699999999999973
No 226
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=91.02 E-value=33 Score=41.38 Aligned_cols=31 Identities=6% Similarity=0.115 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1760 LNETEAMFNSQESELTELSKNIAELQKRIQS 1790 (1807)
Q Consensus 1760 l~~Le~~i~~~e~~le~le~el~~L~~el~~ 1790 (1807)
++.|..++....+++++..+++.++.+++..
T Consensus 226 ~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~ 256 (385)
T 2q13_A 226 LANIGTSVQNVRREMDSDIETMQQTIEDLEV 256 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4444555555555555555555544444443
No 227
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=90.99 E-value=11 Score=39.57 Aligned_cols=43 Identities=19% Similarity=0.235 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1735 KRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTEL 1777 (1807)
Q Consensus 1735 ~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~l 1777 (1807)
++.++..+.+....|.+++..+.....++++++..+.-.|-.+
T Consensus 101 LksRL~~l~~sk~~L~e~L~~q~~~~relERemnsLKPeL~qL 143 (170)
T 3l4q_C 101 LKSRIAEIHESRTKLEQELRAQASDNREIDKRMNSLKPDLMQL 143 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3444444444444444444444444444444444444444433
No 228
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=90.95 E-value=26 Score=40.03 Aligned_cols=6 Identities=17% Similarity=0.207 Sum_probs=2.5
Q ss_pred HHHHHH
Q psy2547 1592 ANDLKR 1597 (1807)
Q Consensus 1592 a~~L~~ 1597 (1807)
++.|.+
T Consensus 48 Ak~L~K 53 (279)
T 3qwe_A 48 AKSTMK 53 (279)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 229
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=90.89 E-value=0.18 Score=53.23 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=51.0
Q ss_pred CCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcC-----CCCCcEEEEEecCCCCCccchh
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT-----FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s-----~rP~~~~iers~d~g~~w~~~q 169 (1807)
.|++.++.... ....+.|.+.....+--|++||++...|+-|+++... ....+..|+=|.| |.+|++|.
T Consensus 32 ~~~p~~arL~~---~~~~~~W~~~~~~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~~S~D-g~~W~~~~ 105 (158)
T 3bn6_A 32 SWFPYYARLDN---QGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDD-GVTWTEYK 105 (158)
T ss_dssp BCCGGGCBTTC---CSSSCSEECSSCCTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECC
T ss_pred ccChhheEEcC---CCCCCcccCCCCCCCCEEEEeCCCceEEEEEEeeCCCCCCCCceEEEEEEEEECC-CCceEEEE
Confidence 45566655311 1245889888766677899999999999999998642 2456777899998 99998875
No 230
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=90.85 E-value=3.4 Score=49.89 Aligned_cols=10 Identities=10% Similarity=0.165 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q psy2547 1759 QLNETEAMFN 1768 (1807)
Q Consensus 1759 ~l~~Le~~i~ 1768 (1807)
+|+.|+..++
T Consensus 106 ~i~~l~~~~~ 115 (409)
T 1m1j_C 106 TIQQLTDMHI 115 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 231
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=90.82 E-value=0.21 Score=51.38 Aligned_cols=62 Identities=6% Similarity=0.090 Sum_probs=48.8
Q ss_pred CCCccccccccCCCCCCccccccCCC---CcceeEEEeccceeEEEEEEEEEc----CCCCCcEEEEEecCCCCC
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENG---VENVTIQLDMEAEFHFTHLIIYFK----TFRPAAMLIERSHDFGKT 164 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~---~~~v~i~l~l~~~f~~~~~~~~f~----s~rP~~~~iers~d~g~~ 164 (1807)
.+|+.+++|+ +..|+|.|.-. ..+..|+|||++.+.|+.|.+++. ..+|..+.|+=|.| |.+
T Consensus 26 ~~~~~~~~Dg-----~~~t~w~~~w~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~D-g~~ 94 (143)
T 2v72_A 26 QDPASSAIDG-----NINTMWHTKWNGSDALPQSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHAINN-GVE 94 (143)
T ss_dssp TBCGGGGSSS-----CTTCCEECCTTSCSCSCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEEET-TEE
T ss_pred CChHHhccCC-----CCCCceecCCCCCCCCCEEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEEEcC-CCc
Confidence 5778889985 34588877532 257899999999999999999985 45778899999988 654
No 232
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=90.76 E-value=1 Score=44.61 Aligned_cols=22 Identities=18% Similarity=0.469 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1698 KNLEKEVALAQKQASGLRSRYQ 1719 (1807)
Q Consensus 1698 e~a~~~a~~ae~~l~el~~~l~ 1719 (1807)
.+++.++...++.+..|+.+|.
T Consensus 95 ~e~E~kAqa~Eerf~KLKe~yt 116 (120)
T 3i00_A 95 SEIERKAQANEQRYSKLKEKYS 116 (120)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444443
No 233
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=90.72 E-value=7.4 Score=38.05 Aligned_cols=10 Identities=30% Similarity=0.106 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q psy2547 1738 RGQMLLNKAS 1747 (1807)
Q Consensus 1738 r~~~l~~~a~ 1747 (1807)
+.++|..+-+
T Consensus 72 eY~~L~KkYk 81 (119)
T 2avr_X 72 QYQELASKYE 81 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 234
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=90.68 E-value=0.11 Score=60.09 Aligned_cols=52 Identities=25% Similarity=0.512 Sum_probs=31.5
Q ss_pred CCCCCcCCCCcccCCCCCCCCCCcCCC--CCCCCCCCCccCCccccCCCCCceeeecCCCCc
Q psy2547 892 GENCERCINGYYGDPRLGIDIPCRPCP--CPGTVESGLSYADTCQLDPRSQDVICECKEGYR 951 (1807)
Q Consensus 892 G~~Ce~C~~G~~G~~~~~~~~~C~~c~--C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~ 951 (1807)
...|..|.+|+|-+...+ ...|.+|. |..+ ......|... .+-+|.|++||.
T Consensus 44 dt~C~pCp~GtYt~~~N~-~~~C~~C~~~C~~g----~~~~~~CT~T---sDtvC~C~~G~y 97 (313)
T 3u3p_A 44 LRVCSSCPVGTFTRHENG-IEKCHDCSQPCPWP----MIEKLPCAAL---TDRECTCPPGMF 97 (313)
T ss_dssp CCEEEECCTTEECCSCBC-CSSCEECCCCCCTT----CEEEECSBTT---BCCEEECCTTEE
T ss_pred CCccccCCCCceeccCCC-CCcCcccccccCCC----CEEecCCcCC---CCccccCCCCce
Confidence 345668888887665432 35788886 8643 2223456433 245788888775
No 235
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=90.61 E-value=0.062 Score=47.32 Aligned_cols=38 Identities=21% Similarity=0.625 Sum_probs=27.6
Q ss_pred CCCcCCCCCCCCCCCCccCCccccC---CCCCceeeecCCCCcCCCCCC
Q psy2547 912 IPCRPCPCPGTVESGLSYADTCQLD---PRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 912 ~~C~~c~C~~~~~~~~~~~~~C~~~---~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
+.|.+.||.++ ++|... ...+.+.|.|++||+|.+|+.
T Consensus 7 ~~C~~~pC~ng--------G~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 7 AEKEKTFCVNG--------GECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp CHHHHTTSCTT--------CEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCCCcCCCC--------cEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 34666778766 688641 122468999999999999983
No 236
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=90.59 E-value=0.077 Score=52.15 Aligned_cols=51 Identities=27% Similarity=0.689 Sum_probs=15.3
Q ss_pred CCcCCC--CccccCCCccc---ccccccCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC--ccccCCCcccC
Q psy2547 1041 PCDRTT--GQCPCLPNVIG---VSCDRCLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG--QCQCKSGFGGR 1108 (1807)
Q Consensus 1041 ~C~~~t--G~C~C~~g~~G---~~C~~C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~ 1108 (1807)
.|.... ..|.|++||.| ..|+. ...|. +.+|. + .|....| .|.|++||.|.
T Consensus 42 ~C~n~~g~y~C~C~~Gy~g~~g~~C~d----------ideC~~~~~C~--~-----~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 42 VCNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCS--Q-----LCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp EEECCSBSCEEECCTTCEEETTTEEEC-------------------------------------------------
T ss_pred EeEeCCCCeEEECCCCccccCCCcccc----------ccccCCCCCcC--C-----eeecCCCCEEEECCCCceEC
Confidence 354433 48999999998 67752 23443 23342 2 5655443 68888888753
No 237
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=90.57 E-value=25 Score=39.26 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1775 TELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1775 e~le~el~~L~~el~~l~~~I~~ 1797 (1807)
+++.+++..|..+...+....+.
T Consensus 200 ~~i~~r~~~l~~~w~~L~~~~~~ 222 (235)
T 2odv_A 200 EQMYRRVYRLHKRLVAIRTEYNL 222 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444454444444443
No 238
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=90.56 E-value=2.7 Score=50.73 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1767 FNSQESELTELSKNIAELQKRIQS 1790 (1807)
Q Consensus 1767 i~~~e~~le~le~el~~L~~el~~ 1790 (1807)
|..+...++.+..+|.+|+..+..
T Consensus 165 i~~l~~~~~~~~~~i~~l~~~~~~ 188 (461)
T 3ghg_B 165 LRVLRSILENLRSKIQKLESDVSA 188 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333344344444444444333
No 239
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=90.53 E-value=0.31 Score=57.14 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=48.1
Q ss_pred CccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCC-ccccccccCCCCCCccccccCC
Q psy2547 43 ATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHK-IHNIVYATVPRTKTISWWQSEN 121 (1807)
Q Consensus 43 ~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~-~~~~~~~~~~~~~~~~wwqs~~ 121 (1807)
...|||.|+ ++++||+-+. .++ +++++|+ +..|+|.|..
T Consensus 2 ~~~NlA~~k--~a~aSS~~~~---------------------------------~~~~a~~AvDG-----~~~t~W~s~~ 41 (293)
T 3cqo_A 2 NYKNVALRG--KATQSARYLH---------------------------------THGAAYNAIDG-----NRNSDFEAGS 41 (293)
T ss_dssp CCEEGGGGS--EEEESSBCSS---------------------------------TTCCGGGGGSS-----CCCCCGGGSC
T ss_pred CCcccCCCC--ceeECcCCCC---------------------------------CCCCcCccccC-----CCCCccCCCc
Confidence 347999986 7788887541 123 5578985 4668998863
Q ss_pred -----CCcceeEEEeccceeEEEEEEEEEc
Q psy2547 122 -----GVENVTIQLDMEAEFHFTHLIIYFK 146 (1807)
Q Consensus 122 -----~~~~v~i~l~l~~~f~~~~~~~~f~ 146 (1807)
...+--|++||++.|.|..|+|.+.
T Consensus 42 c~~t~~~~~~W~~VDLg~~~~v~~V~i~~r 71 (293)
T 3cqo_A 42 CTHTVEQTNPWWRVDLLEPYIVTSITITNR 71 (293)
T ss_dssp SCCBCSBSSCEEEEEEEEEEEEEEEEEECC
T ss_pred eecCCCCCCCEEEEECCCceEEEEEEEEeC
Confidence 2346678999999999999999974
No 240
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=90.50 E-value=0.07 Score=45.17 Aligned_cols=27 Identities=30% Similarity=0.679 Sum_probs=20.8
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|......+.+.|.|++||+|.+|+.
T Consensus 18 G~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 18 GVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred eEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 688632223568999999999999984
No 241
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=90.38 E-value=2.1 Score=40.53 Aligned_cols=57 Identities=12% Similarity=0.142 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2547 1742 LLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1742 l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~ 1798 (1807)
+.-++.-|+..+++....+..+.+++++..++++.+...+..|..++..+...|.++
T Consensus 28 l~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~qR 84 (103)
T 4h22_A 28 FMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQR 84 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555555555555555555566666666666666666666666554
No 242
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=90.27 E-value=0.027 Score=59.88 Aligned_cols=53 Identities=23% Similarity=0.672 Sum_probs=29.6
Q ss_pred CCCCcCCCCcccCCCCCCCCCCcCCC-CCCCCCCCCccCCccccCCCCCceeeecCCCCc
Q psy2547 893 ENCERCINGYYGDPRLGIDIPCRPCP-CPGTVESGLSYADTCQLDPRSQDVICECKEGYR 951 (1807)
Q Consensus 893 ~~Ce~C~~G~~G~~~~~~~~~C~~c~-C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~ 951 (1807)
..|..|++|+|-+.... ...|.+|. |..+. +......|... .+-+|.|++||.
T Consensus 40 t~C~~C~~gty~~~~n~-~~~C~~C~~C~~~~--~~~~~~~Ct~t---~dt~C~C~~G~y 93 (162)
T 1ext_A 40 TDCRECESGSFTASENH-LRHCLSCSKCRKEM--GQVEISSCTVD---RDTVCGCRKNQY 93 (162)
T ss_dssp CEEEECCTTEECCSSBC-CSSCEECCCCCGGG--TCEEEECCBTT---BCCEEECCTTEE
T ss_pred cccccCCCCccccccCC-CCcccccCCCCCCC--CEEEEecccCC---CCCCccCCCCce
Confidence 44667888888765432 24577775 54310 11122345432 245788888875
No 243
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=90.23 E-value=18 Score=36.93 Aligned_cols=8 Identities=38% Similarity=0.522 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q psy2547 1781 IAELQKRI 1788 (1807)
Q Consensus 1781 l~~L~~el 1788 (1807)
-.+|++++
T Consensus 189 ~~~~~~~~ 196 (201)
T 3u0c_A 189 SMQLEKEI 196 (201)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 33444443
No 244
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=90.13 E-value=0.25 Score=65.33 Aligned_cols=67 Identities=10% Similarity=0.157 Sum_probs=54.2
Q ss_pred CCCccccccccCCCCCCccccccCC----CCcceeEEEeccceeEEEEEEEEEcC----CCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSEN----GVENVTIQLDMEAEFHFTHLIIYFKT----FRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~----~~~~v~i~l~l~~~f~~~~~~~~f~s----~rP~~~~iers~d~g~~w~~~ 168 (1807)
.||+++++|+ +..|+|.|.- ...+..|++||++.+.|+.|.++... .++..+-|+=|.| |.+|+++
T Consensus 612 ~~~a~~aiDG-----n~~T~W~S~w~~~~~~~p~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~S~D-G~~W~~v 685 (737)
T 2v5d_A 612 NAPASFASDG-----DMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLD-GENFTEV 685 (737)
T ss_dssp SBCGGGGGSS-----CSSCCEECCCSSSCCCCCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESS-SSCCCCS
T ss_pred CCCHHHccCC-----CCCCceeccccCCCCCCCeEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEEEcC-CCceEEE
Confidence 6899999995 4679999863 23468899999999999999998642 2567889999998 9999886
Q ss_pred h
Q psy2547 169 R 169 (1807)
Q Consensus 169 q 169 (1807)
.
T Consensus 686 ~ 686 (737)
T 2v5d_A 686 K 686 (737)
T ss_dssp E
T ss_pred E
Confidence 3
No 245
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=90.02 E-value=9 Score=39.69 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVNTTAKLKQLNETEAMF 1767 (1807)
Q Consensus 1741 ~l~~~a~~l~~~~~~~~~~l~~Le~~i 1767 (1807)
+...+++...++...++.++..+.+++
T Consensus 114 ~~l~e~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 114 DVLSEKEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333344444443333333
No 246
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=89.92 E-value=4.8 Score=39.53 Aligned_cols=23 Identities=26% Similarity=0.237 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1707 AQKQASGLRSRYQETDNKLLSKA 1729 (1807)
Q Consensus 1707 ae~~l~el~~~l~~~~~~l~~~~ 1729 (1807)
++..+..+...+..+...+.+..
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~ 105 (119)
T 3uun_A 83 VQEQMNLLNSRWECLRVASMEKQ 105 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443333
No 247
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=89.86 E-value=0.15 Score=53.19 Aligned_cols=71 Identities=30% Similarity=0.833 Sum_probs=42.3
Q ss_pred CCCcCCCCccCCCC--CCCccCC-CCCC-CC-CCCccccC-CceEeccCCcc-------ccCCCcCCCCCccCC--CCCC
Q psy2547 1109 QCDQCQTNFWGNPN--VECFPCD-CDPS-GS-ATSQCHQN-NGTCVCHQGIG-------GVRCDTCARGYIGTA--PDCS 1173 (1807)
Q Consensus 1109 ~C~~C~~g~~g~~~--~~C~~C~-C~~~-gs-~~~~C~~~-tG~C~C~~g~~-------G~~C~~C~~g~~~~~--~~C~ 1173 (1807)
.|..|.+|+|-... ..|.+|. |+.. |. ....|... .-.|.|++||. +..|..|++|+|-+. ..|.
T Consensus 39 ~C~~C~~gty~~~~~~~~C~~C~~C~~~~g~~~~~~Ct~t~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtfs~~~~~~C~ 118 (146)
T 2hey_R 39 VCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACK 118 (146)
T ss_dssp EEEECCTTEECCSCBSSCCEECCCCCGGGTEEEEECCBTTBCCEEEECTTEEESCSSSTTSSEEECCTTEECCSTTCCCE
T ss_pred CcccCCCCCEECCCCCCcCcccCCCCCCCCceEeccCccCCCccccCCCCeeeCCCcccCcccccCCCCcccCCCCCCCc
Confidence 34445555544322 2577764 5542 21 12234432 34799999953 457889999998654 4788
Q ss_pred CCCCcc
Q psy2547 1174 PCGECF 1179 (1807)
Q Consensus 1174 ~C~~c~ 1179 (1807)
+|-.|.
T Consensus 119 ~~t~C~ 124 (146)
T 2hey_R 119 PWTNCT 124 (146)
T ss_dssp ECCCTT
T ss_pred CCCCCC
Confidence 888884
No 248
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=89.72 E-value=3 Score=50.35 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1760 LNETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1760 l~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
+...+.+|..++..++.+..+|..|+.++..+
T Consensus 100 ~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l 131 (409)
T 1m1j_C 100 ILAHENTIQQLTDMHIMNSNKITQLKQKIAQL 131 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33334444444444444444444444444443
No 249
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=89.68 E-value=0.07 Score=46.06 Aligned_cols=31 Identities=32% Similarity=0.629 Sum_probs=21.9
Q ss_pred CccccCC--CCCceeeecCCCCcCCCCCC-CCCC
Q psy2547 931 DTCQLDP--RSQDVICECKEGYRGTRCDG-CLDN 961 (1807)
Q Consensus 931 ~~C~~~~--~~~~~~C~C~~g~~G~~Ce~-C~~g 961 (1807)
++|.... ....+.|.|++||+|.+||. ..+|
T Consensus 20 GtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 20 AHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp CEEEEEEETTEEEEEEEECTTEESSSSCEECCCC
T ss_pred CEEeCCccCCCCCEEeECCCCCccCCCcccCCCC
Confidence 6886321 22357899999999999994 4444
No 250
>2qih_A Protein USPA1; trimeric, parallel alpha-helical coiled-coil, cell adhesion; 1.90A {Moraxella catarrhalis}
Probab=89.65 E-value=17 Score=35.85 Aligned_cols=19 Identities=0% Similarity=0.151 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2547 1758 KQLNETEAMFNSQESELTE 1776 (1807)
Q Consensus 1758 ~~l~~Le~~i~~~e~~le~ 1776 (1807)
..|+.|.+.-.++...+++
T Consensus 117 SDIKTLkKnS~~NTdnI~k 135 (157)
T 2qih_A 117 SDIKTLAKVSAANTDRIAK 135 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcchhccchhhh
Confidence 3344443333333333333
No 251
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=89.61 E-value=0.093 Score=60.65 Aligned_cols=99 Identities=22% Similarity=0.547 Sum_probs=53.8
Q ss_pred cCCCCCCCCCCcCCCC---CCCcCCC--CCCCCCCCCcccCCCC-cccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCC
Q psy2547 800 GRRCDRCAPGTYGFGP---EGCKACD--CNHVGALDNICDVVSG-QCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHA 873 (1807)
Q Consensus 800 G~~C~~C~~g~~~~~~---~~C~~C~--C~~~g~~~~~C~~~~g-~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~ 873 (1807)
...|..|.+|+|-... ..|.+|. |...-.....|..... +|.|++||+= .. ..|.+|
T Consensus 44 dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~~~~CT~TsDtvC~C~~G~y~---~~--------~~C~~C------ 106 (313)
T 3u3p_A 44 LRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDRECTCPPGMFQ---SN--------ATCAPH------ 106 (313)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEEEECSBTTBCCEEECCTTEEE---ET--------TEEEEC------
T ss_pred CCccccCCCCceeccCCCCCcCcccccccCCCCEEecCCcCCCCccccCCCCcee---cc--------cccccc------
Confidence 4567788888875432 4688887 8643222335665443 5888888762 10 134443
Q ss_pred CCCCCCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCC
Q psy2547 874 DLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917 (1807)
Q Consensus 874 ~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c 917 (1807)
..|.+..|.=..|. .+....|..|.+|||-+... ....|++|
T Consensus 107 t~CppG~gV~~~cT-~tsDTvC~~Cp~GTFSd~~S-s~~~C~pc 148 (313)
T 3u3p_A 107 TVCPVGWGVRKKGT-ETEDVRCKQCARGTFSDVPS-SVMKCKAY 148 (313)
T ss_dssp CCBCTTEEEEECCC-SSSCCEEEECCTTEECCSCB-SSCCCEEC
T ss_pred ccCCCCCeeeecCC-CCCCCccccCCCCeecCCCC-CCcccccC
Confidence 13333222211222 23456787899999877532 13457665
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=89.58 E-value=0.35 Score=63.53 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=54.5
Q ss_pred CCCccccccccCCCCCCccccccCCCC-----cceeEEEeccceeEEEEEEEEEc-----CCCCCcEEEEEecCCCCCc-
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGV-----ENVTIQLDMEAEFHFTHLIIYFK-----TFRPAAMLIERSHDFGKTW- 165 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~-----~~v~i~l~l~~~f~~~~~~~~f~-----s~rP~~~~iers~d~g~~w- 165 (1807)
.+++++++|. +..|+|.|.... .+-.|+|||++++.|..|.++.. ..+|..+-|+=|.| |++|
T Consensus 41 ~~~~~~~~Dg-----~~~T~W~s~~~~~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i~~S~D-g~~w~ 114 (656)
T 1k3i_A 41 GNECNKAIDG-----NKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSD-GTNWG 114 (656)
T ss_dssp TSCGGGGSSS-----CTTCCEECCCGGGCCCCSCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEEESS-SSCCC
T ss_pred CCcHHhcCCC-----CCCCEEEeCCCCCCCCCCCceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEEEEECC-CCCcc
Confidence 5788999995 456899887543 46899999999999999999975 23789999999999 9999
Q ss_pred cch
Q psy2547 166 QVY 168 (1807)
Q Consensus 166 ~~~ 168 (1807)
++.
T Consensus 115 ~~v 117 (656)
T 1k3i_A 115 SPV 117 (656)
T ss_dssp SCS
T ss_pred eee
Confidence 643
No 253
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=89.55 E-value=0.03 Score=47.22 Aligned_cols=15 Identities=40% Similarity=1.218 Sum_probs=13.8
Q ss_pred ccccCCCcccCCCCc
Q psy2547 1098 QCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1098 ~C~C~~g~~G~~C~~ 1112 (1807)
.|.|++||+|.+|+.
T Consensus 34 ~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 34 SCECAIGFMGQRCEY 48 (52)
T ss_dssp EEECCTTEESTTSCE
T ss_pred EEECCCCCcCCCCcc
Confidence 799999999999974
No 254
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=89.55 E-value=0.052 Score=58.42 Aligned_cols=52 Identities=23% Similarity=0.585 Sum_probs=30.3
Q ss_pred CCCCCcCCCCcccCCCCCCCCCCcCCC--CCCCCCCCCccCCccccCCCCCceeeecCCCCc
Q psy2547 892 GENCERCINGYYGDPRLGIDIPCRPCP--CPGTVESGLSYADTCQLDPRSQDVICECKEGYR 951 (1807)
Q Consensus 892 G~~Ce~C~~G~~G~~~~~~~~~C~~c~--C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~ 951 (1807)
...|..|++|+|-+.... ...|.+|. |..+ ......|.. +.+-+|.|++||.
T Consensus 40 ~t~C~~C~~gty~~~~n~-~~~C~~C~~~C~~g----~~~~~~Ct~---t~d~~C~C~~G~y 93 (173)
T 3alq_R 40 DTVCDSCEDSTYTQLWNW-VPECLSCGSRCSSD----QVETQACTR---EQNRICTCRPGWY 93 (173)
T ss_dssp CCEEEECCTTEECCSSBC-CSSCEECCCCCCTT----EEEEECCCS---SSCCEEEECTTEE
T ss_pred CCcCCcCCCCccccCCCC-CCccCCCCCcCCCC----CEEecCCCC---CCCCeeECCCCeE
Confidence 345668888888765432 24688875 7643 111234533 2346788888875
No 255
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=89.27 E-value=12 Score=36.64 Aligned_cols=16 Identities=19% Similarity=0.275 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1671 LLQERLKSIQAGFLQN 1686 (1807)
Q Consensus 1671 ~l~~~le~lk~~l~~~ 1686 (1807)
++..+++.|+.++..+
T Consensus 6 ~V~s~l~~LEaeyq~L 21 (119)
T 2avr_X 6 SLVGELQALDAEYQNL 21 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555555444
No 256
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.02 E-value=0.37 Score=64.34 Aligned_cols=64 Identities=25% Similarity=0.686 Sum_probs=39.4
Q ss_pred CccccCCCCCceeeecCCCCc---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYR---GTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGD 1007 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~---G~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~ 1007 (1807)
..|...+ +.+.|.|++||. |..|+. ...|. . ++.|.. .|.+...++
T Consensus 324 ~~C~~~~--~~y~C~C~~Gy~l~~g~~C~d------------ideC~-----~------~~~C~~------~C~n~~gsy 372 (791)
T 3m0c_C 324 HVCNDLK--IGYECLCPDGFQLVAQRRCED------------IDECQ-----D------PDTCSQ------LCVNLEGGY 372 (791)
T ss_dssp SEEEECS--BSEEEECCTTCEEETTTEEEC------------CCCCS-----S------SSSCTT------TCCBCSSCB
T ss_pred ccccCCC--CCcccCCCCCCccCCCCcccc------------CcccC-----C------CCCCCC------eeecCCCCc
Confidence 3565443 468999999995 777761 01121 0 122321 366777788
Q ss_pred CCCcccCCCCCCcccCCCC
Q psy2547 1008 HCQVCKAGFFGNALEQNCT 1026 (1807)
Q Consensus 1008 ~C~~C~~G~~G~~~~~~C~ 1026 (1807)
.| .|.+||.+......|.
T Consensus 373 ~C-~C~~Gy~l~~~~~~C~ 390 (791)
T 3m0c_C 373 KC-QCEEGFQLDPHTKACK 390 (791)
T ss_dssp CC-CCCSSEECCSSCCCCE
T ss_pred ee-ecCCCCEeCCCCceee
Confidence 88 6999998765555554
No 257
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=88.65 E-value=0.083 Score=46.03 Aligned_cols=39 Identities=33% Similarity=0.773 Sum_probs=28.7
Q ss_pred CCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCc-CCCCCC
Q psy2547 911 DIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYR-GTRCDG 957 (1807)
Q Consensus 911 ~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~-G~~Ce~ 957 (1807)
.+.|.+-||.++. .++|.... +.+.|.|++||+ |.+|+.
T Consensus 11 ~d~C~snPC~nga------~gtC~~~~--g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSNPCGPEA------AGTCKETN--SGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHCSSCSSS------CCEEEECS--SEEEEECCTTEEEEECSSS
T ss_pred CCcCcCCCCcCCC------ccccccCC--CceEeECCCCCccCCCCCC
Confidence 3568778887641 15786543 469999999999 999974
No 258
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=88.49 E-value=0.21 Score=47.02 Aligned_cols=53 Identities=26% Similarity=0.618 Sum_probs=33.0
Q ss_pred CCcCCC--CccccCCCcc----cccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCC--ccccCCCcccCCCC
Q psy2547 1041 PCDRTT--GQCPCLPNVI----GVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG--QCQCKSGFGGRQCD 1111 (1807)
Q Consensus 1041 ~C~~~t--G~C~C~~g~~----G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~~C~ 1111 (1807)
.|.... ..|.|++||. |..|+. ...|..-+|. + .|....| .|.|+ |+.|..|+
T Consensus 17 ~C~n~~g~y~C~C~~G~~~~~~g~~C~d----------ideC~~~~C~--~-----~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 17 VCKNIPGDFECECPEGYRYNLKSKSCED----------IDECSENMCA--Q-----LCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp SCCCBTTBCCCSSSTTCEEETTTTEEEC----------CCHHHHSCCS--S-----EECCCSSSCCEECC-SSSCCBCC
T ss_pred EeECCCCCEEEECCCCceECCCCCcCCC----------cCeeCCCCCC--C-----EEEccCCCEEEECC-CCcCCccc
Confidence 455443 3899999998 777852 2334333343 2 5655443 69997 77777665
No 259
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=88.22 E-value=31 Score=37.17 Aligned_cols=18 Identities=11% Similarity=0.266 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy2547 1774 LTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1774 le~le~el~~L~~el~~l 1791 (1807)
+++-.++|.+|++.|.++
T Consensus 164 i~eR~~eI~~IE~sI~EL 181 (196)
T 1fio_A 164 VQARHQELLKLEKSMAEL 181 (196)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333444444443333
No 260
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=88.19 E-value=0.43 Score=50.47 Aligned_cols=56 Identities=20% Similarity=0.323 Sum_probs=44.7
Q ss_pred CccccccCCCCcceeEEEeccceeEEEEEEEEEcC-----CCCCcEEEEEecCCCCCccchh
Q psy2547 113 TISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT-----FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 113 ~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s-----~rP~~~~iers~d~g~~w~~~q 169 (1807)
..+.|.+.....+--|++||++...|+-|+++... ....+..|+=|.| |.+|++|.
T Consensus 44 ~~~~W~a~~~~~~qwLqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y~l~yS~D-g~~W~~~~ 104 (160)
T 1czt_A 44 RVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQ-GVEWKPYR 104 (160)
T ss_dssp SSCSEECSSCSTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECC
T ss_pred CCCcccCCCCCCCcEEEEeCCCcEEEEEEEEeCcCCCCcccEEEEEEEEEECC-CCcEEEEE
Confidence 34689887666667899999999999999999742 2445777999988 99998875
No 261
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=87.90 E-value=0.26 Score=40.05 Aligned_cols=28 Identities=29% Similarity=0.635 Sum_probs=21.0
Q ss_pred CCCCCCCCCCCCcc--CC--CCccccCCCcccCCCCc
Q psy2547 1080 DCDPIGSVDVTECN--EY--TGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1080 ~C~~~gs~~~~~C~--~~--tg~C~C~~g~~G~~C~~ 1112 (1807)
+|.+.| +|. .. ...|.|++||+|.+|+.
T Consensus 10 pC~ngg-----~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGG-----VXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSC-----EEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCC-----EEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 677766 785 22 33799999999999973
No 262
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=87.79 E-value=0.15 Score=54.43 Aligned_cols=96 Identities=22% Similarity=0.569 Sum_probs=38.9
Q ss_pred CCCCCCcCCCCcccCCCCCCCCcccCC-CCCC-CCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC
Q psy2547 437 GGRRCDMCKDGFWNFNETNPNGCEPCT-CNIQ-GTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514 (1807)
Q Consensus 437 ~G~~Cd~C~~g~~~~~~~~~~gC~~C~-C~~~-Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C 514 (1807)
.+..|..|.+|+|....+....|.+|. |++. |.+....|... .-+.| .|++|||-.... ...|.+|
T Consensus 33 ~~t~C~~Cp~GtY~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t----------~~t~C-~C~~G~y~~~~~-~~~C~~C 100 (167)
T 1jma_B 33 TGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRT----------ENAVC-GCSPGHFCIVQD-GDHCAAC 100 (167)
T ss_dssp SCCEEEECCTTEECSSCBCSSCCEECCCCCTTTTEEEEECCCSS----------SCCEE-EECTTEEEEECC---CCSEE
T ss_pred CCCcCCcCCCCccccccCcCccccCCcccccCCCeEEeccCCCC----------CCCcc-cCCCCceecCCC-CCcCccc
Confidence 456788999998864433345688884 6653 43321123321 12457 899999975433 2578877
Q ss_pred ----CCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCccccC
Q psy2547 515 ----DCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYSP 554 (1807)
Q Consensus 515 ----~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~~~~g~~~~ 554 (1807)
.|.+|-.+...+. ......|..+.+|+|..
T Consensus 101 ~~~t~C~~G~~~~~~gt----------~~~dt~C~~C~~Gtfs~ 134 (167)
T 1jma_B 101 RAYATSSPGQRVQKGGT----------ESQDTLCQNCPPGTFSP 134 (167)
T ss_dssp EECCC---------------------------------------
T ss_pred cCcccCCCCCEEeccCC----------cCCCCccccCCCCceeC
Confidence 4655422111111 12345677788888763
No 263
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=87.68 E-value=0.93 Score=47.21 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=44.7
Q ss_pred cCC-ccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCccccccccCCCCCCcccccc
Q psy2547 41 YPA-TGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQS 119 (1807)
Q Consensus 41 ~p~-~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs 119 (1807)
-|. ..|||+|+ +.++||+-.. +++++++|+ +..|-|.|
T Consensus 8 ~p~~~~NlAlgk--~a~~SS~~~~----------------------------------~~a~~AvDG-----~~~t~w~~ 46 (148)
T 2j22_A 8 TPKKLSNIALTK--ETRQSSTDYN----------------------------------GFSRLAVDG-----NKNGDYGH 46 (148)
T ss_dssp ----CEETTTTC--EEEESCCCTT----------------------------------CCGGGGGSS-----CCCCCGGG
T ss_pred CCCCCccccCCC--ceeECCCCCC----------------------------------CccCccEeC-----CCCCcccc
Confidence 343 67999987 6688877431 123467875 34566776
Q ss_pred C-----CCCcceeEEEeccceeEEEEEEEEEc
Q psy2547 120 E-----NGVENVTIQLDMEAEFHFTHLIIYFK 146 (1807)
Q Consensus 120 ~-----~~~~~v~i~l~l~~~f~~~~~~~~f~ 146 (1807)
. ....+--+++||++.|.|..|+|...
T Consensus 47 ~sct~T~~~~~~Ww~VDLg~~~~V~~V~i~~r 78 (148)
T 2j22_A 47 HSVTHTKEDSPSWWEIDLAQTEELEKLIIYNR 78 (148)
T ss_dssp TCCCCCCSCTTCEEEEEEEEEEEEEEEEEEEC
T ss_pred cceeccCCCCCCEEEEECCCCEEeeEEEEEec
Confidence 3 23446778999999999999999875
No 264
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=87.64 E-value=2.9 Score=50.13 Aligned_cols=22 Identities=9% Similarity=0.235 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1767 FNSQESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1767 i~~~e~~le~le~el~~L~~el 1788 (1807)
|..++..++....+|..|++.+
T Consensus 107 i~~l~~~~~~~~~~i~~L~~~v 128 (411)
T 3ghg_C 107 IRYLQEIYNSNNQKIVNLKEKV 128 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 265
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=87.49 E-value=0.3 Score=45.86 Aligned_cols=58 Identities=24% Similarity=0.524 Sum_probs=37.3
Q ss_pred CCCCccCCCCCcCCCCcccCCCC---CCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 886 CRNSTDGENCERCINGYYGDPRL---GIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~G~~~~---~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
|.....++.| .|++||.+++.. ...+.|.+-+|. ++|...+ +.+.|.|+ |+.|..|+.
T Consensus 18 C~n~~g~y~C-~C~~G~~~~~~g~~C~dideC~~~~C~----------~~C~n~~--g~y~C~C~-g~~G~~~~~ 78 (87)
T 1z6c_A 18 CKNIPGDFEC-ECPEGYRYNLKSKSCEDIDECSENMCA----------QLCVNYP--GGYTCYCD-GKKGFKLAQ 78 (87)
T ss_dssp CCCBTTBCCC-SSSTTCEEETTTTEEECCCHHHHSCCS----------SEECCCS--SSCCEECC-SSSCCBCCT
T ss_pred eECCCCCEEE-ECCCCceECCCCCcCCCcCeeCCCCCC----------CEEEccC--CCEEEECC-CCcCCcccC
Confidence 5566677888 699999854321 123456554553 3575443 46899998 888887763
No 266
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=87.18 E-value=1.3 Score=43.32 Aligned_cols=35 Identities=9% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1643 AARKDLSQITNDLDDAQQKSNETNVKVKLLQERLK 1677 (1807)
Q Consensus 1643 ~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le 1677 (1807)
+.+.+|+..+.+...++.+...++.++..++.+++
T Consensus 13 EsqskL~~Ae~~k~~Leek~~~~e~~~~~~~~Ele 47 (130)
T 3cl3_D 13 ESQSRLEAATKECQALEGRARAASEQARQLESERE 47 (130)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 33333333333333333333333333333333333
No 267
>1dn1_B Syntaxin 1A, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3c98_B
Probab=87.12 E-value=25 Score=40.07 Aligned_cols=25 Identities=4% Similarity=0.061 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1751 VNTTAKLKQLNETEAMFNSQESELT 1775 (1807)
Q Consensus 1751 ~~~~~~~~~l~~Le~~i~~~e~~le 1775 (1807)
..++++.++|..|+..|.++..-..
T Consensus 193 ~~i~~R~~~i~~ie~~i~el~~if~ 217 (267)
T 1dn1_B 193 SEIETRHSEIIKLENSIRELHDMFM 217 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555544444444433333
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=87.00 E-value=0.44 Score=58.51 Aligned_cols=64 Identities=25% Similarity=0.671 Sum_probs=38.7
Q ss_pred CccccCCCCCceeeecCCCCc---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYR---GTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGD 1007 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~---G~~Ce~C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~ 1007 (1807)
..|...+ +.+.|.|++||. |..|+. -..|.. ++.|.. .|.....++
T Consensus 12 ~~C~~~~--~~y~C~C~~G~~~~~~~~C~d------------ideC~~-----------~~~C~~------~C~n~~g~~ 60 (400)
T 3p5b_L 12 HVCNDLK--IGYECLCPDGFQLVAQRRCED------------IDECQD-----------PDTCSQ------LCVNLEGGY 60 (400)
T ss_dssp SEEEECS--SSEEEECCTTEEECSSSCEEE------------CCCCST-----------TSSCSS------CCBCCSSSC
T ss_pred CEeECCC--CCeEEECCCCCCcCCCCcccC------------chhhhc-----------cCCCCC------ccCCCccce
Confidence 4676544 468999999998 777762 011210 012221 255555667
Q ss_pred CCCcccCCCCCCcccCCCC
Q psy2547 1008 HCQVCKAGFFGNALEQNCT 1026 (1807)
Q Consensus 1008 ~C~~C~~G~~G~~~~~~C~ 1026 (1807)
.| .|.+||.+......|.
T Consensus 61 ~C-~C~~g~~~~~~~~~C~ 78 (400)
T 3p5b_L 61 KC-QCEEGFQLDPHTKACK 78 (400)
T ss_dssp BC-CCCTTCCCCTTTSSCC
T ss_pred ee-ecccccccccccccee
Confidence 77 6889988876555554
No 269
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=86.92 E-value=0.099 Score=49.14 Aligned_cols=56 Identities=25% Similarity=0.526 Sum_probs=33.7
Q ss_pred CCCCccCCCCCcCCCCcccCCCCC----CCCCCcC--CCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCC
Q psy2547 886 CRNSTDGENCERCINGYYGDPRLG----IDIPCRP--CPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGT 953 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~G~~~~~----~~~~C~~--c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~ 953 (1807)
|.....++.| .|++||.+++..+ ..+.|.. +.|.+ ++|.... +.+.|.|++||+|.
T Consensus 18 C~n~~g~y~C-~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~---------~~C~n~~--g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 18 CVNTPGDFEC-KCDEGYESGFMMMKNCMDIDECQRDPLLCRG---------GVCHNTE--GSYRCECPPGHQLS 79 (86)
T ss_dssp EEEETTEEEE-CCCSSEEECTTTSSSEEECCHHHHCSSTTTT---------SEEEEET--TEEEEESCTTSCCC
T ss_pred EECCCCCEEe-eCCCCcCccCCCCCccCCcccccCCCCcCCC---------CEeEcCC--CCEEEECcCCcccC
Confidence 4444556777 5888887543221 2344543 33432 4676543 57899999999875
No 270
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=86.68 E-value=6.1 Score=38.74 Aligned_cols=23 Identities=17% Similarity=0.276 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1707 AQKQASGLRSRYQETDNKLLSKA 1729 (1807)
Q Consensus 1707 ae~~l~el~~~l~~~~~~l~~~~ 1729 (1807)
++..+..+...++.+.....+..
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~ 105 (118)
T 3uul_A 83 IQEQMTLLNARWEALRVESMERQ 105 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443333
No 271
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=86.52 E-value=45 Score=37.17 Aligned_cols=7 Identities=14% Similarity=0.244 Sum_probs=2.7
Q ss_pred HHHHHHH
Q psy2547 1524 ITKQLDE 1530 (1807)
Q Consensus 1524 l~~~lk~ 1530 (1807)
+.+.+.+
T Consensus 77 l~~~~~~ 83 (244)
T 1uru_A 77 LMDSVCE 83 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333443
No 272
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=86.09 E-value=0.8 Score=49.93 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=43.1
Q ss_pred cccccC----CCCcceeEEEeccceeEEEEE-EEEEc-----CCCCCcEEEEEecCCCCCccchh
Q psy2547 115 SWWQSE----NGVENVTIQLDMEAEFHFTHL-IIYFK-----TFRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 115 ~wwqs~----~~~~~v~i~l~l~~~f~~~~~-~~~f~-----s~rP~~~~iers~d~g~~w~~~q 169 (1807)
..|.+. ....+--|++||++...|+-| +++.. ...+.++.|+=|.| |.+|++|.
T Consensus 51 ~aW~a~~~~~~~~~~qwLQVDLg~~~~VtgV~~tQG~~~~~~~~~vt~Y~l~yS~D-G~~W~~~~ 114 (192)
T 2w1s_A 51 GVWYKTLNGDTSLAGEFIGLDLGKEIKLDGIRFVIGKNGGGSSDKWNKFKLEYSLD-NESWTTIK 114 (192)
T ss_dssp CEEEECHHHHCBCTTCEEEEEEEEEEEEEEEEEEECCSSTTTTCCCSEEEEEEESS-SSSCEEEE
T ss_pred CEEeCCcccccCCCCceEEEECCCeEEEEEEEEEcCCCCCCCCCeEEEEEEEEEcC-CCCeEEEe
Confidence 378772 444567899999999999999 66653 24677899999999 99999876
No 273
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=85.88 E-value=1.2 Score=43.51 Aligned_cols=23 Identities=17% Similarity=0.065 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKLK 1758 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~~ 1758 (1807)
+.++.+|+..-..|..++...++
T Consensus 82 KrkLAqLQ~AY~~LfqeYd~~lK 104 (130)
T 3cl3_D 82 KRKLAQLQVAYHQLFQEYDNHIK 104 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555555555555555444
No 274
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=85.86 E-value=0.59 Score=51.91 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=42.8
Q ss_pred ccccccCCCCcceeEEEeccceeEEEEEEEEEcCC-------CCCcEEEEEecCCCCCccchh
Q psy2547 114 ISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTF-------RPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 114 ~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~-------rP~~~~iers~d~g~~w~~~q 169 (1807)
.++|.+.....+--|++||++...|+-|+++-... --.++.|+=|.| |.+|.+|.
T Consensus 43 ~~aW~a~~~d~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~yS~D-G~~W~~y~ 104 (218)
T 4deq_A 43 ENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 104 (218)
T ss_dssp SCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred CCeECCCCCCCCCeEEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEEEEeC-CCceEEee
Confidence 47898887666778999999999999999986421 224556788888 99999875
No 275
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=85.67 E-value=2.4 Score=37.62 Aligned_cols=44 Identities=23% Similarity=0.359 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1748 QLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1748 ~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
.|...+..+..+|...+..|+.++.+|++++++|..|..++...
T Consensus 23 eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 23 DLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445555566666666667777777777777776666554
No 276
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=85.39 E-value=9.7 Score=36.90 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1760 LNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1760 l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
+..|++.++.++.+++.++.++..+++++.++...|.+
T Consensus 67 ~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 67 TEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555556666666666666555554
No 277
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=85.27 E-value=0.74 Score=49.49 Aligned_cols=95 Identities=17% Similarity=0.304 Sum_probs=43.5
Q ss_pred CCCCCCcCCCCcccCCCCCCCCcccCC-CCCC-CCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC
Q psy2547 437 GGRRCDMCKDGFWNFNETNPNGCEPCT-CNIQ-GTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514 (1807)
Q Consensus 437 ~G~~Cd~C~~g~~~~~~~~~~gC~~C~-C~~~-Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C 514 (1807)
....|..|.+|+|-...+....|.+|. |+.. |.+-...|.. ..-+.|. |++|||-.+ ..-.-|.+|
T Consensus 35 ~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~----------t~d~~C~-C~~G~~~~~-~~c~~C~~~ 102 (177)
T 3qd6_R 35 TETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTS----------ETDTICT-CEEGWHCTS-EACESCVLH 102 (177)
T ss_dssp CCCBCCBCCSSEECCSSBCCSSCEECCCCCGGGTEEEEECCCT----------TSCCEEE-ECTTEEESS-SSCCCEEEC
T ss_pred CCCccccCCCCceecCCCCCCcCCCCCcCCCcCCeEEecCCcC----------CCCceee-cCCCcEECC-CCCcccccc
Confidence 345688899998764433345688875 6652 3321112433 2234565 888888543 122334444
Q ss_pred -CCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCcccc
Q psy2547 515 -DCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYS 553 (1807)
Q Consensus 515 -~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~~~~g~~~ 553 (1807)
.|.+|-.+...|. ......|..+.+|+|.
T Consensus 103 ~~C~pG~~v~~~~t----------~~~dt~C~~C~~Gtfs 132 (177)
T 3qd6_R 103 RSCSPGFGVKQIAT----------GVSDTICEPCPVGFFS 132 (177)
T ss_dssp CCC------CCCCC----------SSCCCCCCC-------
T ss_pred CcCCCCcEEEeCCc----------cCCCCccccCCCCccc
Confidence 4765522222221 2345678888899885
No 278
>1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1
Probab=85.21 E-value=0.28 Score=48.28 Aligned_cols=90 Identities=27% Similarity=0.713 Sum_probs=61.4
Q ss_pred CCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCc-CCCCccCCCCCCCccCCCCCCC----------CCCCcccc
Q psy2547 1074 TGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQ-CQTNFWGNPNVECFPCDCDPSG----------SATSQCHQ 1142 (1807)
Q Consensus 1074 ~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~-C~~g~~g~~~~~C~~C~C~~~g----------s~~~~C~~ 1142 (1807)
.+|..+.|..+. .|+.+++.|.|. -..|.. |..||--+.. ||..|.|.+.- +.+..|+.
T Consensus 6 ~~ce~~~c~~~~-----~c~~~~~~C~c~----~~~C~l~C~~Gf~~D~~-GC~~C~C~~~p~k~~~~~~~Cp~g~~c~~ 75 (119)
T 1skz_A 6 PGCEEAGCPEGS-----ACNIITDRCTCS----GVRCRVHCPHGFQRSRY-GCEFCKCRLEPMKATCDISECPEGMMCSR 75 (119)
T ss_dssp -CHHHHCCCTTC-----BCCTTTCSSCBC----CCSSCCCCTTCEEECTT-SCEEEEECSSCCCSCCCGGGSCTTEECCT
T ss_pred CCcCcccCCccc-----hhhhhhcccccc----cCccCCcCCCcceECCC-CCCCCCCcCCCCcCCcccccCCccccccc
Confidence 355555565522 788889999776 356765 8888877744 89999997641 12234555
Q ss_pred CCceEeccCCccccCCCc-CCCCCccCCCCCCCCC
Q psy2547 1143 NNGTCVCHQGIGGVRCDT-CARGYIGTAPDCSPCG 1176 (1807)
Q Consensus 1143 ~tG~C~C~~g~~G~~C~~-C~~g~~~~~~~C~~C~ 1176 (1807)
....|.|+. -..|+. |+.||.-+..+|.-|-
T Consensus 76 ~~~~C~C~~---~~~C~k~Cp~G~~~De~GC~~C~ 107 (119)
T 1skz_A 76 LTNKCDCKI---DINCRKTCPNGLKRDKLGCEYCE 107 (119)
T ss_dssp TTSSSCEES---CCCCCCCCSSCEEECTTSCEEEE
T ss_pred cccccccCC---cCcccccCCCcceECCCCCCCCC
Confidence 566677764 346874 9999998888888764
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.05 E-value=1 Score=59.99 Aligned_cols=50 Identities=28% Similarity=0.733 Sum_probs=29.7
Q ss_pred CCcCCC--CccccCCCcc---cccccccCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC--ccccCCCccc
Q psy2547 1041 PCDRTT--GQCPCLPNVI---GVSCDRCLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG--QCQCKSGFGG 1107 (1807)
Q Consensus 1041 ~C~~~t--G~C~C~~g~~---G~~C~~C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G 1107 (1807)
.|.... ..|.|++||. |..|.. ...|. ++.|.. .|....| .|.|.+||.+
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~d----------ideC~~~~~C~~-------~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCSQ-------LCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEEC----------CCCCSSSSSCTT-------TCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCcccCCCCCCccCCCCcccc----------CcccCCCCCCCC-------eeecCCCCceeecCCCCEe
Confidence 455443 3799999995 777752 33443 333322 5654433 6888888854
No 280
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=84.97 E-value=1.7 Score=50.63 Aligned_cols=16 Identities=0% Similarity=-0.022 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHhh
Q psy2547 1560 QIRERANEINNVIKSL 1575 (1807)
Q Consensus 1560 ~I~~l~~~i~~~~~~L 1575 (1807)
+++.+.+.+.+.+..+
T Consensus 33 ~~e~v~~~fwdY~~~~ 48 (307)
T 2l7b_A 33 RWELALGRFWDYLRWV 48 (307)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4555555555555444
No 281
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=84.85 E-value=0.17 Score=52.32 Aligned_cols=55 Identities=22% Similarity=0.573 Sum_probs=32.9
Q ss_pred cCCCCcc---------cCCCCCCCCCCcCCCC---CCCcCCC-CCCCCCC-CCcccCCC-CcccCCCCcc
Q psy2547 793 VCKPNVV---------GRRCDRCAPGTYGFGP---EGCKACD-CNHVGAL-DNICDVVS-GQCKCRAQTY 847 (1807)
Q Consensus 793 ~C~~~~~---------G~~C~~C~~g~~~~~~---~~C~~C~-C~~~g~~-~~~C~~~~-g~C~C~~g~~ 847 (1807)
.|+||+. ...|..|.+|+|-... ..|.+|. |...+.+ ...|.... -.|.|++||+
T Consensus 19 ~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~Ct~t~dtvC~C~~G~y 88 (142)
T 2uwi_A 19 LCKPGTYSDHRCDKYSDTICGHCPSDTFTSIYNRSPWCHSCRGPCGTNRVEVTPCTPTTNRICHCDSNSY 88 (142)
T ss_dssp CBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCBTTBCCEEEECTTEE
T ss_pred CCCCCCeeCccCCCCCCCccCcCCCCCCcccCCCCCccCCCcCcccCCeeEeecCCCCCCCEeeCCCCcE
Confidence 5666665 4568889999885432 2477765 5443222 13455443 3588888776
No 282
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=84.77 E-value=1.5 Score=47.13 Aligned_cols=55 Identities=20% Similarity=0.221 Sum_probs=43.7
Q ss_pred ccccccCCC---Cc-ceeEEEeccceeEEEEEEEEEcC------CCCCcEEEEEecCCCCCccchh
Q psy2547 114 ISWWQSENG---VE-NVTIQLDMEAEFHFTHLIIYFKT------FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 114 ~~wwqs~~~---~~-~v~i~l~l~~~f~~~~~~~~f~s------~rP~~~~iers~d~g~~w~~~q 169 (1807)
.+.|.+... .. +--|++||+....|+-|+++... .-..++.|+=|.| |.+|++|.
T Consensus 57 ~~aW~a~~~~~~d~~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y~l~yS~D-g~~W~~y~ 121 (178)
T 2wuh_A 57 DGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRD-GTRWISWR 121 (178)
T ss_dssp TSSBCCSSCBBTTBCCCCEEEEEEEEEEEEEEEEECCCGGGTCCCCCSEEEEEEESS-SSSCEECC
T ss_pred CCeecCCcCCCCCCCCCEEEEecCCceEEeEEEEecccCCCCccceeEEEEEEEEcC-CCcEEEEe
Confidence 467877654 23 56799999999999999999742 3457889999999 89998875
No 283
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=84.76 E-value=0.54 Score=59.04 Aligned_cols=74 Identities=23% Similarity=0.541 Sum_probs=47.5
Q ss_pred CCcc-ccCCCcccCCC-CcCCCCccCCCCCCCccCCCCCCCCCCCccccCCceE--eccCCc---cccCCC-cCCCCCcc
Q psy2547 1096 TGQC-QCKSGFGGRQC-DQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTC--VCHQGI---GGVRCD-TCARGYIG 1167 (1807)
Q Consensus 1096 tg~C-~C~~g~~G~~C-~~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C--~C~~g~---~G~~C~-~C~~g~~~ 1167 (1807)
..+| .|++...+..| +.|++|||.++...+. .|++.+.. ....+| .|+.+| .+..|- .|++|||.
T Consensus 221 ~~~C~~C~~~~~~~~Cv~~Cp~g~y~~~~~~~~--~~~p~~~~-----~~~~~Cv~~Cp~~~~l~~~g~Cv~~Cp~G~y~ 293 (501)
T 1mox_A 221 ESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQM--DVNPEGKY-----SFGATCVKKCPRNYVVTDHGSCVRACGADSYE 293 (501)
T ss_dssp STTEEEESSEEETTEEESSCCCSEEEETTTTEE--EECTTCCE-----EETTEEESSCCTTCEECTTSBEESSCCSSCCC
T ss_pred CcccccccccCCCCcccccCCCCeeecCCceEE--ecCCCccc-----cchhhhhcccCcccEeccCCEEeccCCCCCee
Confidence 3578 89998888899 4699999887664322 22332211 112466 387775 355787 59999986
Q ss_pred CC----CCCCCCC
Q psy2547 1168 TA----PDCSPCG 1176 (1807)
Q Consensus 1168 ~~----~~C~~C~ 1176 (1807)
.. ..|.+|+
T Consensus 294 ~~~~~~~~C~~C~ 306 (501)
T 1mox_A 294 MEEDGVRKCKKCE 306 (501)
T ss_dssp BCSSSSCBCCCC-
T ss_pred cCCCCCCcCcCCC
Confidence 42 3699986
No 284
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1
Probab=84.58 E-value=47 Score=41.55 Aligned_cols=19 Identities=26% Similarity=0.225 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy2547 1779 KNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1779 ~el~~L~~el~~l~~~I~~ 1797 (1807)
..+..|..++..+...|-.
T Consensus 161 ~~~~~l~~~~~~ll~~Lv~ 179 (575)
T 1bf5_A 161 KNKQVLWDRTFSLFQQLIQ 179 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 3455555555555555543
No 285
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=84.49 E-value=15 Score=42.31 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1767 FNSQESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1767 i~~~e~~le~le~el~~L~~el 1788 (1807)
.+..+++|..+...|..|..+.
T Consensus 159 h~~le~~l~~~~~~i~~L~~~a 180 (283)
T 3pe0_A 159 AQDEKEQLNEYKGHLSGLAKRA 180 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444433
No 286
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=84.48 E-value=69 Score=37.48 Aligned_cols=19 Identities=0% Similarity=-0.073 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQ 1685 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~ 1685 (1807)
..+....+.++..+..+..
T Consensus 141 k~~~~~~~~l~kaKk~Y~~ 159 (320)
T 3m3w_A 141 KPWLKRLKEVEASKKSYHT 159 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444433
No 287
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=84.44 E-value=0.82 Score=48.40 Aligned_cols=66 Identities=14% Similarity=0.314 Sum_probs=49.9
Q ss_pred CCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEE-----cCCCCCcEEEEEecCCCCCccchh
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYF-----KTFRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f-----~s~rP~~~~iers~d~g~~w~~~q 169 (1807)
.+.+.+|+|+ +.+|+|||.... .=.|+|++.+...|..|.|.+ .|..|..+.|.-..+ ...|+.+.
T Consensus 38 g~gv~~L~D~-----~~~TyWqSdg~q-pH~I~i~f~k~v~i~~l~i~vd~~~DeSYtPs~I~v~aG~~-~~dL~ei~ 108 (171)
T 1jhj_A 38 GFGVDQLRDD-----NLETYWQSDGSQ-PHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNN-FHNLQEIR 108 (171)
T ss_dssp TBSTHHHHSS-----CTTCCEECCSSS-SEEEEEEEEEEEEECEEEEEEEHHHHGGGSEEEEEEEEESS-TTSCEEEE
T ss_pred CCChHHcCCC-----CCCeeEccCCCC-CeEEEEEECCCceEEEEEEEECCCCCCCCCcEEEEEEEeCC-cccceeEE
Confidence 3568889885 577999998543 667777778888898887776 399999999988877 35565553
No 288
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=84.36 E-value=1.3 Score=56.78 Aligned_cols=40 Identities=33% Similarity=0.890 Sum_probs=30.7
Q ss_pred eeEEeeceeeeecc--ccccCccccccCCCCCCCCCCccccccCCCCCCCCCCcc
Q psy2547 265 YYYAITQMIVRGSC--SCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEK 317 (1807)
Q Consensus 265 ~~yai~~~~v~g~C--~C~gha~~C~~~~~~~~~~~~~~~~C~C~hnt~G~~Ce~ 317 (1807)
.=|++.|..|+-.| .|.||.. |+ .|+|.|..++.|.+|+.
T Consensus 524 ~gw~g~dc~i~~~Cp~~C~ghG~-C~------------~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 524 QTWAIDNVYIGDGCLDMCSGHGR-CV------------QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCEEEEEEEEESCSSGGGGGSEE-EE------------TTEEEECTTEESTTSCE
T ss_pred CCcccccccccCCCCcccCCCcE-EC------------CCCEeeCCCccCCCcCc
Confidence 34788888876554 7888865 53 47899999999999964
No 289
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=84.13 E-value=0.76 Score=38.71 Aligned_cols=28 Identities=32% Similarity=0.740 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCCcc--CCC--CccccCCCcccCCCCc
Q psy2547 1080 DCDPIGSVDVTECN--EYT--GQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1080 ~C~~~gs~~~~~C~--~~t--g~C~C~~g~~G~~C~~ 1112 (1807)
+|.++| +|. ... ..|.|++||+|.+|+.
T Consensus 13 pC~ngg-----~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGG-----VCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSC-----EEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCc-----EEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 677766 786 333 3699999999999986
No 290
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=84.00 E-value=84 Score=38.07 Aligned_cols=12 Identities=25% Similarity=0.277 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q psy2547 1471 LINEKEAKAEEV 1482 (1807)
Q Consensus 1471 ~l~~~~~~~~~l 1482 (1807)
.+...+.+++.+
T Consensus 45 ~l~~~E~~~~~l 56 (407)
T 4h8s_A 45 LLSVFEEDAGTL 56 (407)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333343333
No 291
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=83.40 E-value=5 Score=33.46 Aligned_cols=10 Identities=0% Similarity=0.185 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q psy2547 1692 DVENEEKNLE 1701 (1807)
Q Consensus 1692 ~a~~~ae~a~ 1701 (1807)
.+++++..+.
T Consensus 36 ~ak~eA~RAN 45 (52)
T 1jcd_A 36 AAKDDAARAN 45 (52)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 292
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=83.39 E-value=0.36 Score=63.05 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=29.3
Q ss_pred CCccccccccCCCCCCccccccCCC---CcceeEEEeccceeEEEEEEEEEcCC-CCCcEEEEEecCCCCCccch
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENG---VENVTIQLDMEAEFHFTHLIIYFKTF-RPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~---~~~v~i~l~l~~~f~~~~~~~~f~s~-rP~~~~iers~d~g~~w~~~ 168 (1807)
.++++++|. +..|||.|.+. ...-.|++||++...|.-|.+.+... .+....||=|.| |++|++-
T Consensus 603 g~~~~a~Dg-----d~~T~w~s~~~~~~~~g~wi~VdL~~~~~V~~I~i~~~~~~~~~~~~ve~S~D-Gk~W~~v 671 (716)
T 2cho_A 603 KNLPLQVKA-----NRVLISPANEVVKWAAGNSVEIELDAIYPGENIQINFGKDAPCTWGRLEISTD-AKEWKTV 671 (716)
T ss_dssp -CCCEEEET-----TEEEECC------------CEEEEEEEEEEEEEEECC------------------------
T ss_pred cCchheeCC-----CcceEEECCCCccCCCCCEEEEEcCCcEEEEEEEEecCCCCCCceEEEEEECC-CCCccCC
Confidence 367789985 67899999865 44678999999999999999988421 223478999999 9999887
No 293
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=83.24 E-value=7.8 Score=42.46 Aligned_cols=68 Identities=13% Similarity=0.201 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1612 TVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1612 ~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~l 1679 (1807)
..+.+...|+.+.-+...+..+|.++...|++++...+.+.+++..++..-..++..|..++.|++.+
T Consensus 157 ~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~ 224 (242)
T 3uux_B 157 FSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFL 224 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444455455555555555554444444445444444444444444444444433
No 294
>2bsg_A Fibritin; viral protein, attachment protein, bacteriophage assembly, chaperone, coiled coil, structural protein; 15.00A {Bacteriophage T4}
Probab=82.91 E-value=2.3 Score=51.38 Aligned_cols=29 Identities=14% Similarity=0.359 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2547 1592 ANDLKRKANLTKAGADSTKNTVQKIVDVL 1620 (1807)
Q Consensus 1592 a~~L~~~a~~a~~ea~~l~~~l~~l~~~L 1620 (1807)
+..|-+.....+..+.++...++.+++.|
T Consensus 56 V~~Ld~N~~~~~~~~ne~~~~Vn~I~~~L 84 (487)
T 2bsg_A 56 VEVLDKNIGILKTSLETANSDIKTIQGIL 84 (487)
T ss_pred HHHHhhhHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333344444444444444444444444
No 295
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1
Probab=82.79 E-value=35 Score=42.65 Aligned_cols=12 Identities=17% Similarity=-0.103 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q psy2547 1774 LTELSKNIAELQ 1785 (1807)
Q Consensus 1774 le~le~el~~L~ 1785 (1807)
+..+.+++..|-
T Consensus 163 ~~~l~~~~~~ll 174 (575)
T 1bf5_A 163 KQVLWDRTFSLF 174 (575)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 333444444443
No 296
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=82.72 E-value=1.2 Score=44.79 Aligned_cols=33 Identities=24% Similarity=0.756 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCccCCccccCCCCCce-eeecCCCCcCCCCCC
Q psy2547 917 CPCPGTVESGLSYADTCQLDPRSQDV-ICECKEGYRGTRCDG 957 (1807)
Q Consensus 917 c~C~~~~~~~~~~~~~C~~~~~~~~~-~C~C~~g~~G~~Ce~ 957 (1807)
|||.++ ++|........+ .|.|++||+|..|+.
T Consensus 1 ~pC~ng--------gtC~~~~~~~~~~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 1 CDCLNG--------GTCVSNKYFSNIHWCNCPKKFGGQHCEI 34 (122)
T ss_dssp CCCCSS--------CEEEECTTTTTCEEEECCTTEESTTSCE
T ss_pred CCCCCc--------CCcCCCcccCCCCCccCCCCCCCccccc
Confidence 477776 788543211234 899999999999995
No 297
>1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1
Probab=82.41 E-value=0.52 Score=46.44 Aligned_cols=81 Identities=28% Similarity=0.774 Sum_probs=53.8
Q ss_pred CCcCCCCccccCCCcccccccc-cCCCCcccCCCCCCCCCCCCCCCC----------CCCCCccCCCCccccCCCcccCC
Q psy2547 1041 PCDRTTGQCPCLPNVIGVSCDR-CLKNHWKIASGTGCEPCDCDPIGS----------VDVTECNEYTGQCQCKSGFGGRQ 1109 (1807)
Q Consensus 1041 ~C~~~tG~C~C~~g~~G~~C~~-C~~g~~~~~~~~~C~~c~C~~~gs----------~~~~~C~~~tg~C~C~~g~~G~~ 1109 (1807)
.|+.+++.|.|+. ..|.. |.-||-.+ ..||..|.|.+.-. .+. .|+.....|.|+. -..
T Consensus 18 ~c~~~~~~C~c~~----~~C~l~C~~Gf~~D--~~GC~~C~C~~~p~k~~~~~~~Cp~g~-~c~~~~~~C~C~~---~~~ 87 (119)
T 1skz_A 18 ACNIITDRCTCSG----VRCRVHCPHGFQRS--RYGCEFCKCRLEPMKATCDISECPEGM-MCSRLTNKCDCKI---DIN 87 (119)
T ss_dssp BCCTTTCSSCBCC----CSSCCCCTTCEEEC--TTSCEEEEECSSCCCSCCCGGGSCTTE-ECCTTTSSSCEES---CCC
T ss_pred hhhhhhccccccc----CccCCcCCCcceEC--CCCCCCCCCcCCCCcCCcccccCCccc-cccccccccccCC---cCc
Confidence 6888888887763 56775 88888755 56899898876421 112 4444555677764 345
Q ss_pred CCc-CCCCccCCCCCCCccCCCCC
Q psy2547 1110 CDQ-CQTNFWGNPNVECFPCDCDP 1132 (1807)
Q Consensus 1110 C~~-C~~g~~g~~~~~C~~C~C~~ 1132 (1807)
|+. |+.||--+ ..||..|.|..
T Consensus 88 C~k~Cp~G~~~D-e~GC~~C~C~~ 110 (119)
T 1skz_A 88 CRKTCPNGLKRD-KLGCEYCECRP 110 (119)
T ss_dssp CCCCCSSCEEEC-TTSCEEEEECC
T ss_pred ccccCCCcceEC-CCCCCCCCCCC
Confidence 764 88887654 33888887765
No 298
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=82.39 E-value=12 Score=33.79 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1653 NDLDDAQQKSNETNVKVKLLQERLKSIQAGF 1683 (1807)
Q Consensus 1653 ~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l 1683 (1807)
.....++++|.+++.+-.+|..+++.++.++
T Consensus 38 ~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ 68 (81)
T 1wt6_A 38 TDNQNFASQLREAEARNRDLEAHVRQLQERM 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444444433333333333
No 299
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=82.35 E-value=70 Score=35.96 Aligned_cols=14 Identities=21% Similarity=0.107 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHH
Q psy2547 1671 LLQERLKSIQAGFL 1684 (1807)
Q Consensus 1671 ~l~~~le~lk~~l~ 1684 (1807)
.|+++++..++.+.
T Consensus 110 pLe~k~e~d~k~~~ 123 (253)
T 2d1l_A 110 PLQEQMEEWKKVAN 123 (253)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHH
Confidence 34444444444444
No 300
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=82.31 E-value=1.1 Score=53.16 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=49.0
Q ss_pred CCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcC-------CCCCcEEEEEecCCCCCccchh
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT-------FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s-------~rP~~~~iers~d~g~~w~~~q 169 (1807)
|++.++.+. +..+.|.+.....+--|++||++...|+-|+++... ....++.|+=|.| |.+|.+|.
T Consensus 34 ~~p~~arl~-----~~~~~W~~~~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 106 (325)
T 2qqj_A 34 WTPQQSRLH-----GDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTN-GEDWMVYR 106 (325)
T ss_dssp SCGGGCBTT-----CSSCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred cCccceeec-----CCCCccccCcCCcCccEEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEEEEcC-CcEeEEee
Confidence 555555542 224789887665567899999999999999999852 2335677899998 99999875
No 301
>4e40_A Putative uncharacterized protein; haptoglobin-hemoglobin receptor, helical bundle, receptor, C surface, transport protein; 1.60A {Trypanosoma congolense}
Probab=82.19 E-value=55 Score=34.64 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1503 AYDHAASVRNKTAAYVASTSNITKQLD 1529 (1807)
Q Consensus 1503 ~~~~a~~~~~~~e~~~~~~~~l~~~lk 1529 (1807)
+..-+..++...++...++..+++..+
T Consensus 122 Al~ha~~AK~~GDAaa~~v~~lLkrar 148 (252)
T 4e40_A 122 ATEHAKGAKANGDASAVKVSNLLARAK 148 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhhhhhhccchHHHHHHHHHHHhh
Confidence 344445555566666666666666544
No 302
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=82.11 E-value=17 Score=35.37 Aligned_cols=15 Identities=20% Similarity=0.157 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1671 LLQERLKSIQAGFLQ 1685 (1807)
Q Consensus 1671 ~l~~~le~lk~~l~~ 1685 (1807)
.+...++++..-+.+
T Consensus 6 ~f~~~l~el~~WL~e 20 (118)
T 3uul_A 6 SYQIALEEVLTWLLS 20 (118)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444433
No 303
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=82.00 E-value=8.7 Score=34.94 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCI 1792 (1807)
Q Consensus 1741 ~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~ 1792 (1807)
.|+.+++.+...+++-..+-..+..+++.....|+.+..+|..|...|.++.
T Consensus 24 ~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL~ 75 (79)
T 3cvf_A 24 ELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARLA 75 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 3444444444444444444444455555555566666666666666665543
No 304
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=81.96 E-value=0.62 Score=48.79 Aligned_cols=76 Identities=28% Similarity=0.570 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcCCCC-cccCCCCCCCCCCcCCC-CCCCCCC
Q psy2547 848 GRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCING-YYGDPRLGIDIPCRPCP-CPGTVES 925 (1807)
Q Consensus 848 G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd~~tg~C~~C~~~~~G~~Ce~C~~G-~~G~~~~~~~~~C~~c~-C~~~~~~ 925 (1807)
|.-|..|+||+|-...| ........|..|++| +|-+...+ ...|.+|. |..+.
T Consensus 41 ~~CC~~CppG~~v~~~C----------------------t~~~~~t~C~pC~~g~ty~~~~n~-~~~C~~C~~C~~~~-- 95 (156)
T 3tje_F 41 QFCHKPCPPGERKARDC----------------------TVNGDEPDCVPCQEGKEYTDKAHF-SSKCRRCRLCDEGH-- 95 (156)
T ss_dssp TTCSSCBCTTEEESSCC----------------------CSSSCCCCEEECCTTTEECSSCBS-CSCCEECCCCCGGG--
T ss_pred CeECCCCCCCCeECCcC----------------------CCCCCCCcceeCCCCCeeeccCCC-CCcCcCCCCCCCCc--
Confidence 45578899988764332 221112455578888 66554321 23566655 54321
Q ss_pred CCccCCccccCCCCCceeeecCCCCc
Q psy2547 926 GLSYADTCQLDPRSQDVICECKEGYR 951 (1807)
Q Consensus 926 ~~~~~~~C~~~~~~~~~~C~C~~g~~ 951 (1807)
+......|... .+-+|.|++||.
T Consensus 96 g~~~~~~CT~t---~dtvC~C~~G~f 118 (156)
T 3tje_F 96 GLEVEINCTRT---QNTKCRCKPNFF 118 (156)
T ss_dssp TEEEEECCBTT---BCCEEEECTTEE
T ss_pred ceEEeccccCC---CCCeeeCCCCCE
Confidence 11112345433 245788888875
No 305
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=81.77 E-value=80 Score=36.24 Aligned_cols=28 Identities=4% Similarity=0.120 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1766 MFNSQESELTELSKNIAELQKRIQSCIN 1793 (1807)
Q Consensus 1766 ~i~~~e~~le~le~el~~L~~el~~l~~ 1793 (1807)
..+.+.++.+.++++|......|..+..
T Consensus 151 s~~~LLkkh~~le~~l~~~~~~i~~L~~ 178 (283)
T 3pe0_A 151 RLEDLLQDAQDEKEQLNEYKGHLSGLAK 178 (283)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555666666555555443
No 306
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=81.76 E-value=1.2 Score=52.69 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=49.2
Q ss_pred CCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcC-------CCCCcEEEEEecCCCCCccchh
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT-------FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s-------~rP~~~~iers~d~g~~w~~~q 169 (1807)
|++.++.+. +..+.|.+.....+--|++||++...|+-|+++... ....++.|+=|.| |.+|++|.
T Consensus 33 ~~p~~arl~-----~~~~~W~~~~~~~~qwlqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i~~S~D-g~~W~~~~ 105 (318)
T 2qqi_A 33 WSAERSRLN-----YPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 105 (318)
T ss_dssp GCGGGGBTT-----CSSCCBCCSSCCTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECE
T ss_pred CChhhhhhc-----CCCCeEcCCCCCCCceEEEccCCcEEEEeeeeeccccCCCCccEeEEEEEEEEecC-CCeEEEEe
Confidence 455555542 234789887766667899999999999999999742 2345677899998 99998864
No 307
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=81.44 E-value=27 Score=42.35 Aligned_cols=9 Identities=11% Similarity=0.187 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q psy2547 1773 ELTELSKNI 1781 (1807)
Q Consensus 1773 ~le~le~el 1781 (1807)
++.++++++
T Consensus 88 kl~aYe~~~ 96 (497)
T 3iox_A 88 KLKAYEDEQ 96 (497)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 308
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=81.42 E-value=0.41 Score=39.10 Aligned_cols=28 Identities=29% Similarity=0.850 Sum_probs=20.9
Q ss_pred CCCCCCCCCCCCCccCC----CCccccCCCcccCCCCc
Q psy2547 1079 CDCDPIGSVDVTECNEY----TGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1079 c~C~~~gs~~~~~C~~~----tg~C~C~~g~~G~~C~~ 1112 (1807)
.+|.+ | +|... ...|.|++||+|.+|+.
T Consensus 12 ~pC~n-G-----~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLH-G-----QCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSS-E-----EEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCC-C-----EeeccCCCCCEEEECCCCCccCCCCc
Confidence 56666 6 77532 23699999999999984
No 309
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=81.42 E-value=1e+02 Score=37.26 Aligned_cols=29 Identities=3% Similarity=0.124 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1768 NSQESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1768 ~~~e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
..+...++.+..+++...+++....+.+.
T Consensus 250 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (407)
T 4h8s_A 250 SSVADMVQSIQVELEAEAEKMRVSQQELL 278 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33334444444444444445554444443
No 310
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=81.17 E-value=31 Score=41.87 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1773 ELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1773 ~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
.+.+++.++.+-++++..+.+.+.
T Consensus 81 ~~AeY~~kl~aYe~~~~~~~k~la 104 (497)
T 3iox_A 81 DLADYPVKLKAYEDEQTSIKAALA 104 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 311
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=81.07 E-value=0.57 Score=39.01 Aligned_cols=27 Identities=37% Similarity=0.879 Sum_probs=20.3
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|..........|.|++||+|.+||.
T Consensus 19 G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 19 GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 567433334568899999999999984
No 312
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=80.65 E-value=76 Score=35.26 Aligned_cols=15 Identities=20% Similarity=0.229 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1558 PEQIRERANEINNVI 1572 (1807)
Q Consensus 1558 ~~~I~~l~~~i~~~~ 1572 (1807)
..+++.+...+..+.
T Consensus 36 D~~fe~~~~~f~~~e 50 (244)
T 1uru_A 36 DEIFDDHLNNFNRQQ 50 (244)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 344555554444433
No 313
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=80.25 E-value=30 Score=41.34 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1732 SGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ 1770 (1807)
Q Consensus 1732 l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~ 1770 (1807)
.+.++.+++++.+..+.|.+++..+.....++++++..+
T Consensus 207 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 245 (373)
T 3hhm_B 207 YDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSI 245 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344444445555444444444444444444444433333
No 314
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=80.17 E-value=0.22 Score=53.50 Aligned_cols=93 Identities=24% Similarity=0.606 Sum_probs=46.6
Q ss_pred CCCCcCCCCcccCCCCCCCCcccCC--CCCCCCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC--
Q psy2547 439 RRCDMCKDGFWNFNETNPNGCEPCT--CNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC-- 514 (1807)
Q Consensus 439 ~~Cd~C~~g~~~~~~~~~~gC~~C~--C~~~Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C-- 514 (1807)
..|..|.+|+|-........|.+|. |.. |.+....|... .-+.| .|++|||-..... .+|..|
T Consensus 41 t~C~~C~~gty~~~~n~~~~C~~C~~~C~~-g~~~~~~Ct~t----------~d~~C-~C~~G~y~~~~~~-~~c~~C~~ 107 (173)
T 3alq_R 41 TVCDSCEDSTYTQLWNWVPECLSCGSRCSS-DQVETQACTRE----------QNRIC-TCRPGWYCALSKQ-EGCRLCAP 107 (173)
T ss_dssp CEEEECCTTEECCSSBCCSSCEECCCCCCT-TEEEEECCCSS----------SCCEE-EECTTEEEEEECS-SSEEEEEE
T ss_pred CcCCcCCCCccccCCCCCCccCCCCCcCCC-CCEEecCCCCC----------CCCee-ECCCCeEeccCCC-CCCCcccc
Confidence 4566788887764433334688885 764 54432224321 11345 4778877543221 345555
Q ss_pred --CCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCccccC
Q psy2547 515 --DCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYSP 554 (1807)
Q Consensus 515 --~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~~~~g~~~~ 554 (1807)
.|.+|-.+...|. ....+.|..+.+|+|..
T Consensus 108 ~~~C~~G~~v~~~~t----------~~~dt~C~~C~~Gtfs~ 139 (173)
T 3alq_R 108 LRKCRPGFGVARPGT----------ETSDVVCKPCAPGTFSN 139 (173)
T ss_dssp CCCBCTTEEEEECCT----------TTSCCEEEECCTTEECC
T ss_pred cCcCCCCeeEecCCc----------CCCCCcccCCCCCeecC
Confidence 3544311111111 12335566677887753
No 315
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=80.15 E-value=16 Score=33.00 Aligned_cols=23 Identities=26% Similarity=0.547 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1657 DAQQKSNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1657 ~~e~~l~~~e~~l~~l~~~le~l 1679 (1807)
+++.+...+..++..++++++++
T Consensus 49 eae~rn~eL~~e~~~l~~~~eel 71 (81)
T 1wt6_A 49 EAEARNRDLEAHVRQLQERMELL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344444444443
No 316
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=79.88 E-value=0.31 Score=42.79 Aligned_cols=32 Identities=34% Similarity=0.697 Sum_probs=23.5
Q ss_pred CCCCCCCCCCCCCCCCccC-------CCCccccCCCcccCCCCc
Q psy2547 1076 CEPCDCDPIGSVDVTECNE-------YTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1076 C~~c~C~~~gs~~~~~C~~-------~tg~C~C~~g~~G~~C~~ 1112 (1807)
|.+.+|.++| +|.. ....|.|++||+|.+|+.
T Consensus 9 C~~~pC~ngG-----~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 9 KEKTFCVNGG-----ECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp HHHTTSCTTC-----EEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCcCCCCc-----EEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 4445677766 7863 234799999999999974
No 317
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=79.88 E-value=51 Score=32.76 Aligned_cols=10 Identities=10% Similarity=0.205 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q psy2547 1670 KLLQERLKSI 1679 (1807)
Q Consensus 1670 ~~l~~~le~l 1679 (1807)
++++..|+.+
T Consensus 15 ~~I~~~i~~i 24 (127)
T 1ez3_A 15 EEIRGFIDKI 24 (127)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 318
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=79.78 E-value=3.1 Score=49.17 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=50.4
Q ss_pred CCCccccccccCCCCCCccccccC---CCCcceeEEEeccceeEEEEEEEEEcC-----CCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSE---NGVENVTIQLDMEAEFHFTHLIIYFKT-----FRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~---~~~~~v~i~l~l~~~f~~~~~~~~f~s-----~rP~~~~iers~d~g~~w~~~ 168 (1807)
.|++.++.+. +..+.|.+. ....+--|++||++...|+.|+++... ....+..|+-|.| |.+|++|
T Consensus 188 ~~~p~~arl~-----~~~~~W~~~~a~~~~~~qwLqVDLg~~~~Vt~V~tqg~~~~~~~~~v~~Y~l~~S~d-g~~W~~~ 261 (318)
T 2qqi_A 188 NWMPENIRLV-----TSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNN-GSDWKMI 261 (318)
T ss_dssp TCCGGGGBTT-----CCCCSCSBCCCTTCCSCCCEEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEEEEESS-SSSCEEC
T ss_pred ccCchhhhhc-----ccCCceeCcccccCCcCcEEEEeCCCceEEEEEEEcCccCCCCCeEEEEEEEEEECC-CCCEEEE
Confidence 5677776552 234778753 233466899999999999999999742 3567889999998 9999886
Q ss_pred h
Q psy2547 169 R 169 (1807)
Q Consensus 169 q 169 (1807)
.
T Consensus 262 ~ 262 (318)
T 2qqi_A 262 M 262 (318)
T ss_dssp B
T ss_pred E
Confidence 5
No 319
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=79.75 E-value=0.22 Score=52.87 Aligned_cols=116 Identities=21% Similarity=0.559 Sum_probs=61.4
Q ss_pred CCCCccccccCCcCCCCCCCCCCCCccccc-CCC-CCCCCCCccCCCCCCCcCCcccccCCCCCCCCCCcCCCCcccCCC
Q psy2547 376 EGRNCERCKQYFYKDPNKEFSDPEVCLRCD-CDP-GGSLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWNFNE 453 (1807)
Q Consensus 376 ~G~~C~~C~~g~~~~~~~~~~~~~~C~~C~-C~~-~gs~~~~~C~~~~~~~~~~G~C~Ck~~~~G~~Cd~C~~g~~~~~~ 453 (1807)
....|..|.+|+|.+.+- ....|++|. |++ .|.+....|... .-..| .|++|||....
T Consensus 38 ~~t~C~~C~~gty~~~~n---~~~~C~~C~~C~~~~~~~~~~~Ct~t----------------~dt~C-~C~~G~y~~~~ 97 (162)
T 1ext_A 38 QDTDCRECESGSFTASEN---HLRHCLSCSKCRKEMGQVEISSCTVD----------------RDTVC-GCRKNQYRHYW 97 (162)
T ss_dssp SCCEEEECCTTEECCSSB---CCSSCEECCCCCGGGTCEEEECCBTT----------------BCCEE-ECCTTEEEEEE
T ss_pred CCcccccCCCCccccccC---CCCcccccCCCCCCCCEEEEecccCC----------------CCCCc-cCCCCceeccC
Confidence 345688999999976542 224688885 553 232222234332 11235 57778775321
Q ss_pred -CCCCCcccCC-CCCCCCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC-CCCCCCCCCCCCcc
Q psy2547 454 -TNPNGCEPCT-CNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC-DCDPGASYDNNCDV 528 (1807)
Q Consensus 454 -~~~~gC~~C~-C~~~Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C-~C~~~g~~~~~C~~ 528 (1807)
.....|.+|. |.+ |.+.. .|.+ ..-..|. |.+|||.-. ..|+|| .|..++.....|..
T Consensus 98 ~~~~~~C~~C~~C~~-G~v~~-~ct~----------~~dtvC~-C~~G~ys~~----~~C~~ct~C~~~~~~~~~C~~ 158 (162)
T 1ext_A 98 SENLFQCFNCSLCLN-GTVHL-SCQE----------KQNTVCT-CHAGFFLRE----NECVSCSNCKKSLECTKLCLP 158 (162)
T ss_dssp ETTEEEEEECCCCTT-EEEEE-CCBT----------TBCCEEE-ECTTEEEET----TEEEEGGGCCTTSSCHHHHSC
T ss_pred CCCcccccCCCcCCC-CEEec-cccC----------CCCcccc-CCCCeecCC----CcCCCCCCCCCCCEeeccCCC
Confidence 1123366653 432 33221 1322 2235687 999999754 478888 47655443333433
No 320
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=79.72 E-value=17 Score=33.02 Aligned_cols=12 Identities=17% Similarity=0.470 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q psy2547 1710 QASGLRSRYQET 1721 (1807)
Q Consensus 1710 ~l~el~~~l~~~ 1721 (1807)
.+.+++.+|+.+
T Consensus 10 il~eiRaQYE~i 21 (77)
T 3trt_A 10 AMRDVRQQYESV 21 (77)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444443
No 321
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=79.72 E-value=14 Score=35.01 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1761 NETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1761 ~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
.+|..+|..+..+-..++.++..|...+..+
T Consensus 59 ~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~ 89 (93)
T 3s4r_A 59 RELRRQVDQLTNDKARVEVERDNLAEDIMRL 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333344444444444333
No 322
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=79.63 E-value=21 Score=31.80 Aligned_cols=51 Identities=10% Similarity=0.065 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1741 ~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
.|+.++..+...+++-..+-..+..+++.....|+.+..+|..|...|..+
T Consensus 18 ~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 18 DLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 344444444444444443444444455555555555555555555555543
No 323
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=78.96 E-value=13 Score=40.13 Aligned_cols=8 Identities=0% Similarity=0.156 Sum_probs=2.7
Q ss_pred HHHHHHHH
Q psy2547 1676 LKSIQAGF 1683 (1807)
Q Consensus 1676 le~lk~~l 1683 (1807)
++.++.++
T Consensus 75 ~~~l~~qL 82 (191)
T 1nfn_A 75 KSELEEQL 82 (191)
T ss_dssp HHHHTTC-
T ss_pred HHHHHHhc
Confidence 33343333
No 324
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=78.85 E-value=1.9 Score=49.25 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=44.9
Q ss_pred ccccccCCCCcceeEEEeccceeEEEEEEEEEcC---CCCCcEEEEEecCCCCCccchh
Q psy2547 114 ISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT---FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 114 ~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s---~rP~~~~iers~d~g~~w~~~q 169 (1807)
.+.|.+.....+--|++||+....|+-|+++... ....+..|+=|.| |.+|++|.
T Consensus 49 ~~~W~a~~~d~~qwLqVDLg~~~~Vt~V~tQG~~~~~~~vt~Y~l~yS~D-g~~W~~y~ 106 (257)
T 2vm9_A 49 SESWSSSVLDKNQFIVAGSDSVKHFVAISTQGRGDHDQWVTSYKLRYTLD-NVNWVEYN 106 (257)
T ss_dssp CSSEECSSCSTTCCEEEEEEEEEEEEEEEEECCSSSSCEEEEEEEEEESS-SSCEEEGG
T ss_pred CCeeeCCCCCCCcEEeecCCCcEEEEEEEEeCCccCCceEEEEEEEEEcC-CCcEEEEc
Confidence 4789887665677899999999999999999853 2345677888998 89999976
No 325
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=78.81 E-value=1 Score=58.21 Aligned_cols=31 Identities=32% Similarity=0.866 Sum_probs=23.2
Q ss_pred CCC-CCCCCccCCCCCccCCCCC-cCCCCcccC
Q psy2547 875 LCD-SKTGTCISCRNSTDGENCE-RCINGYYGD 905 (1807)
Q Consensus 875 ~Cd-~~tg~C~~C~~~~~G~~Ce-~C~~G~~G~ 905 (1807)
+|. +....|..|.+...|..|- .|++|||++
T Consensus 544 tC~Gp~~~~C~~C~~~~~~~~Cv~~CP~G~~~~ 576 (617)
T 2ahx_A 544 TCHGPGPDNCTKCSHFKDGPNCVEKCPDGLQGA 576 (617)
T ss_dssp SBSSSSTTSBSSBSSEEETTEEESSCCEEEEBS
T ss_pred ccCCCCCCccccCcccccCCceeccCCCCcccc
Confidence 444 2345688899877888995 799999976
No 326
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=78.63 E-value=59 Score=32.78 Aligned_cols=15 Identities=13% Similarity=0.093 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1672 LQERLKSIQAGFLQN 1686 (1807)
Q Consensus 1672 l~~~le~lk~~l~~~ 1686 (1807)
+-.++++|+..++.+
T Consensus 26 LvtkVDDLQD~VE~L 40 (141)
T 3okq_A 26 LLSKVDDLQDVIEIM 40 (141)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHH
Confidence 333444444444333
No 327
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.47 E-value=0.5 Score=57.67 Aligned_cols=58 Identities=24% Similarity=0.591 Sum_probs=17.1
Q ss_pred CCCCccCCCCCcCCCCcc----cCCCCCCCCCCc-CCCCCCCCCCCCccCCccccCCCCCceeeecCCCCc----CCCCC
Q psy2547 886 CRNSTDGENCERCINGYY----GDPRLGIDIPCR-PCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYR----GTRCD 956 (1807)
Q Consensus 886 C~~~~~G~~Ce~C~~G~~----G~~~~~~~~~C~-~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~----G~~Ce 956 (1807)
|.....++.| .|++||. |..|. ..+.|. +-+|. ..|.... +.+.|.|++||+ |..|.
T Consensus 17 C~~~~g~~~C-~C~~G~~l~~~~~~C~-d~~eC~~~~~C~----------~~C~~~~--g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 17 CQMIRGAVQC-TCHTGYRLTEDGRTCQ-DVNECAEEGYCS----------QGCTNSE--GAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp -------------------------------------CCT----------TEEC-------CCEECCTTEEECTTSSCEE
T ss_pred CcCCCCCcEe-ECCCCceECCCCCccC-ccceeCCcCccc----------CcCCCCC--CCCeEEECCCceEcCCCCeEC
Confidence 5333344778 6888887 44442 234553 33443 2365433 468999999998 88886
Q ss_pred C
Q psy2547 957 G 957 (1807)
Q Consensus 957 ~ 957 (1807)
.
T Consensus 83 ~ 83 (386)
T 3v65_B 83 A 83 (386)
T ss_dssp E
T ss_pred C
Confidence 3
No 328
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=78.39 E-value=0.88 Score=37.81 Aligned_cols=27 Identities=33% Similarity=0.880 Sum_probs=19.4
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|..........|.|++||+|.+|+.
T Consensus 19 G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 19 GTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CEEeeccCCCCeEEECCCCCcccCCCc
Confidence 355433223457899999999999984
No 329
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=78.34 E-value=9.5 Score=31.82 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2547 1691 MDVENEEKNLEKEVALAQK 1709 (1807)
Q Consensus 1691 ~~a~~~ae~a~~~a~~ae~ 1709 (1807)
..++.++..++.++..+.+
T Consensus 28 ~al~~~v~~ak~eA~RAN~ 46 (52)
T 1jcd_A 28 NAARSDAQAAKDDAARANQ 46 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333344444444333333
No 330
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=77.95 E-value=23 Score=31.99 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1765 AMFNSQESELTELSKNIAELQKR 1787 (1807)
Q Consensus 1765 ~~i~~~e~~le~le~el~~L~~e 1787 (1807)
.++..+.++|+...++|..|..+
T Consensus 54 ~El~~Lq~qLe~kd~ei~rL~~~ 76 (81)
T 3qh9_A 54 AEVAQLQEQVALKDAEIERLHSQ 76 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHH
Confidence 33444444444444444444443
No 331
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=77.61 E-value=1.6 Score=56.21 Aligned_cols=81 Identities=19% Similarity=0.433 Sum_probs=43.6
Q ss_pred CCCccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCC---cCCCC
Q psy2547 880 TGTCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGY---RGTRC 955 (1807)
Q Consensus 880 tg~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~---~G~~C 955 (1807)
...|+.|++...+..|. .|++|||.++.. ++.++.+.+- -.|...|.. .||.+| .+..|
T Consensus 228 ~~~C~aC~~~~~~g~Cv~~CP~~~~y~~~t-----~~~~~n~~~~---y~~~~~Cv~---------~Cp~~~~~~~~~~C 290 (608)
T 1n8y_C 228 HSDCLACLHFNHSGICELHCPALVTYNTDT-----FESMHNPEGR---YTFGASCVT---------TCPYNYLSTEVGSC 290 (608)
T ss_dssp TTSBSSBSSEEETTEEESSCCCSEEC----------CCEECTTCC---EEETTEEES---------SCCTTCEECTTSBE
T ss_pred CCccccCcccccCCchhccCCCcccccCcc-----eeeecCCccc---cccchhhhh---------cCCcccEeccCCeE
Confidence 34688898877788884 799999877632 2222222110 011122210 577776 45577
Q ss_pred C-CCCCCCCCC-CCCCCCCCCCCC
Q psy2547 956 D-GCLDNYFGN-PQERGGSCEPCD 977 (1807)
Q Consensus 956 e-~C~~g~~g~-p~~~~~~C~~C~ 977 (1807)
- .|++|||.+ .....+.|+||.
T Consensus 291 v~~CP~g~~~~~~~~~~~~C~~C~ 314 (608)
T 1n8y_C 291 TLVCPPNNQEVTAEDGTQRCEKCS 314 (608)
T ss_dssp ESSCCTTEEEEECTTSCEEEEECS
T ss_pred eccCCCCCcccccCCCCCccccCC
Confidence 5 588888865 211134677763
No 332
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=77.58 E-value=44 Score=35.56 Aligned_cols=172 Identities=9% Similarity=0.019 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1605 GADSTKNTVQKIVDVLTEARTAQD---------MAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQER 1675 (1807)
Q Consensus 1605 ea~~l~~~l~~l~~~L~~a~~~~~---------~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~ 1675 (1807)
++......+.++..=+.++...+. .++..++.-+.-..++...-..++......+.-+....-....+..+
T Consensus 5 dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~ 84 (185)
T 3lbx_B 5 DKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREK 84 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1676 LKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTA 1755 (1807)
Q Consensus 1676 le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~ 1755 (1807)
+..|...-..+......-+..++... .+....+.++++..=+...+..+.. ..+......++.|+.+.+.+.+.+..
T Consensus 85 l~~L~~~w~~L~~~w~~r~~~L~~~l-~l~~F~~d~~~~~~Wl~~~e~~L~~--~~~g~sl~~ve~LlkkH~~fe~~l~~ 161 (185)
T 3lbx_B 85 LQQVMSRRKEMNEKWEARWERLRMLL-EVCQFSRDASVAEAWLIAQEPYLAS--GDFGHTVDSVEKLIKRHEAFEKSTAS 161 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC--CCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHhHhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1756 KLKQLNETEAMFNSQESELTELSK 1779 (1807)
Q Consensus 1756 ~~~~l~~Le~~i~~~e~~le~le~ 1779 (1807)
...++..|.+.-.--.+++...+.
T Consensus 162 ~~e~i~~L~~~t~~e~~~~~~~~~ 185 (185)
T 3lbx_B 162 WAERFAALEKPTTLELKERQIAER 185 (185)
T ss_dssp THHHHHHHHSCCHHHHHHHHHHC-
T ss_pred hHHHHHHHhhhHHHHHHHHHHhcC
No 333
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=77.54 E-value=15 Score=32.59 Aligned_cols=51 Identities=12% Similarity=0.215 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1628 DMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKS 1678 (1807)
Q Consensus 1628 ~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~ 1678 (1807)
..+.++|.++..+|..++...+.+-.++..++..-..++..|..++.+|+.
T Consensus 17 nma~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~ 67 (72)
T 2xu6_A 17 NSTMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDF 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 334444444444454444444444444444444444444444444444433
No 334
>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A*
Probab=77.47 E-value=0.96 Score=58.39 Aligned_cols=81 Identities=25% Similarity=0.566 Sum_probs=46.5
Q ss_pred CCCccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCc--CCCCC
Q psy2547 880 TGTCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYR--GTRCD 956 (1807)
Q Consensus 880 tg~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~--G~~Ce 956 (1807)
...|..|++...+..|- .|++|||.++.. ..|.++| .+- ..|...|.. .|+.+|. +..|-
T Consensus 221 ~~~C~~C~~~~~~~~Cv~~Cp~~~~~~~~~---~~~~~~p--~~~---y~~~~~Cv~---------~Cp~~~~~~~~~Cv 283 (621)
T 1m6b_A 221 DTDCFACRHFNDSGACVPRCPQPLVYNKLT---FQLEPNP--HTK---YQYGGVCVA---------SCPHNFVVDQTSCV 283 (621)
T ss_dssp GGGBSSBSSEEETTEEESSCSCSEEECTTT---SSEEECT--TCC---EEETTEEES---------SCCSSCEEETTEEE
T ss_pred ccccccccccccCCceeccCCCcccccccc---eeeeeCC--ccc---ccccccccc---------cCCcccEeeCCEEe
Confidence 34588899888888895 799999988753 2344433 210 011122220 3777763 45565
Q ss_pred -CCCCCCCCCCCCCCCCCCCCC
Q psy2547 957 -GCLDNYFGNPQERGGSCEPCD 977 (1807)
Q Consensus 957 -~C~~g~~g~p~~~~~~C~~C~ 977 (1807)
.|++|||.+.......|+||.
T Consensus 284 ~~Cp~g~~~~~~~~~~~C~~C~ 305 (621)
T 1m6b_A 284 RACPPDKMEVDKNGLKMCEPCG 305 (621)
T ss_dssp SSCCTTEEEEEETTEEEEEECS
T ss_pred ccCCCCcccccCCCccccccCC
Confidence 488888865421112566663
No 335
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=77.34 E-value=16 Score=40.52 Aligned_cols=16 Identities=13% Similarity=-0.039 Sum_probs=4.1
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVNTTAK 1756 (1807)
Q Consensus 1741 ~l~~~a~~l~~~~~~~ 1756 (1807)
.|+.+-+.+..++...
T Consensus 157 ~L~~kh~~l~~el~~~ 172 (224)
T 2iak_A 157 RKKSYHAELMRELEQK 172 (224)
T ss_dssp -----CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3333333333333333
No 336
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.19 E-value=1.4 Score=53.80 Aligned_cols=51 Identities=27% Similarity=0.713 Sum_probs=32.0
Q ss_pred CCcCCCC--ccccCCCcc---cccccccCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC--ccccCCCcccC
Q psy2547 1041 PCDRTTG--QCPCLPNVI---GVSCDRCLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG--QCQCKSGFGGR 1108 (1807)
Q Consensus 1041 ~C~~~tG--~C~C~~g~~---G~~C~~C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~G~ 1108 (1807)
.|....| .|.|++||. |..|+. ...|. +..|.. .|....| .|.|.+||.+.
T Consensus 13 ~C~~~~~~y~C~C~~G~~~~~~~~C~d----------ideC~~~~~C~~-------~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 13 VCNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCSQ-------LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp EEEECSSSEEEECCTTEEECSSSCEEE----------CCCCSTTSSCSS-------CCBCCSSSCBCCCCTTCCCC
T ss_pred EeECCCCCeEEECCCCCCcCCCCcccC----------chhhhccCCCCC-------ccCCCccceeeecccccccc
Confidence 3544333 799999998 788863 33453 234432 5654433 68888888764
No 337
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=76.51 E-value=20 Score=33.07 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1762 ETEAMFNSQESELTELSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1762 ~Le~~i~~~e~~le~le~el~~L~~el~~l~~~ 1794 (1807)
.|..++..+.-.++++.-+|+.+.++.+++-.+
T Consensus 31 ~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~d 63 (83)
T 2xdj_A 31 DNQSDIDSLRGQIQENQYQLNQVVERQKQILLQ 63 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333334444444433333333
No 338
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=76.48 E-value=0.73 Score=47.58 Aligned_cols=67 Identities=16% Similarity=0.419 Sum_probs=39.4
Q ss_pred CCCCCCcCCCCcccCCCCCCCCcccCC-CCCCCCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC
Q psy2547 437 GGRRCDMCKDGFWNFNETNPNGCEPCT-CNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514 (1807)
Q Consensus 437 ~G~~Cd~C~~g~~~~~~~~~~gC~~C~-C~~~Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C 514 (1807)
....|..|.+|+|-...+....|.+|. |...+.+--..|... .-+.| +|++|||-...+....|..|
T Consensus 34 ~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~Ct~t----------~dtvC-~C~~G~yc~~~~~~~~C~~C 101 (142)
T 2uwi_A 34 SDTICGHCPSDTFTSIYNRSPWCHSCRGPCGTNRVEVTPCTPT----------TNRIC-HCDSNSYCLLKASDGNCVTC 101 (142)
T ss_dssp CCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCBTT----------BCCEE-EECTTEEEEEECTTSCEEEE
T ss_pred CCCccCcCCCCCCcccCCCCCccCCCcCcccCCeeEeecCCCC----------CCCEe-eCCCCcEecccCCCCCCCCC
Confidence 356788899998865443445698886 765444422235432 12556 48889885432222456666
No 339
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=76.38 E-value=0.97 Score=47.35 Aligned_cols=64 Identities=25% Similarity=0.689 Sum_probs=35.4
Q ss_pred CCCCcCCCC-cccCCCCCCCCcccCC-CCCC-CCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC
Q psy2547 439 RRCDMCKDG-FWNFNETNPNGCEPCT-CNIQ-GTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514 (1807)
Q Consensus 439 ~~Cd~C~~g-~~~~~~~~~~gC~~C~-C~~~-Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C 514 (1807)
..|..|.+| +|-...+....|.+|. |++. |.+-...|... .-..| +|++|||-.. ....-|.+|
T Consensus 64 t~C~pC~~g~ty~~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t----------~dtvC-~C~~G~fc~~-~~C~~C~~c 130 (156)
T 3tje_F 64 PDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRT----------QNTKC-RCKPNFFCNS-TVCEHCDPC 130 (156)
T ss_dssp CCEEECCTTTEECSSCBSCSCCEECCCCCGGGTEEEEECCBTT----------BCCEE-EECTTEECCS-SSCSCCEEC
T ss_pred CcceeCCCCCeeeccCCCCCcCcCCCCCCCCcceEEeccccCC----------CCCee-eCCCCCEeCC-CCCcccccC
Confidence 567788888 6654433345688885 7663 22211225442 23456 6888888543 222345554
No 340
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=76.38 E-value=1.9e+02 Score=37.55 Aligned_cols=6 Identities=33% Similarity=0.495 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy2547 1615 KIVDVL 1620 (1807)
Q Consensus 1615 ~l~~~L 1620 (1807)
.++..|
T Consensus 649 rtrd~L 654 (861)
T 2zuo_A 649 RTRDAL 654 (861)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 341
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=76.26 E-value=6.1 Score=36.05 Aligned_cols=51 Identities=12% Similarity=0.077 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1742 LLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCI 1792 (1807)
Q Consensus 1742 l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~ 1792 (1807)
+.+++..|..++..+...|++|...+.+..++|+.+.+++..|.++++.+.
T Consensus 12 le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 12 LEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334444455555555555666666666666666666666666665555544
No 342
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=75.66 E-value=27 Score=41.27 Aligned_cols=14 Identities=7% Similarity=0.316 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHH
Q psy2547 1777 LSKNIAELQKRIQS 1790 (1807)
Q Consensus 1777 le~el~~L~~el~~ 1790 (1807)
+.+++..++++++.
T Consensus 99 a~~e~~~l~~~l~~ 112 (365)
T 1gqe_A 99 AVAELDALEEKLAQ 112 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444433
No 343
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=75.44 E-value=1.3 Score=36.82 Aligned_cols=27 Identities=30% Similarity=0.797 Sum_probs=20.3
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|..........|.|++||+|.+|+.
T Consensus 23 G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CEEEEecCCCCeeEECCCCcccccccc
Confidence 577533333467899999999999984
No 344
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Probab=75.14 E-value=0.97 Score=57.16 Aligned_cols=126 Identities=27% Similarity=0.675 Sum_probs=0.0
Q ss_pred CCCC-CCCCCCcCCCCCCCcCC---CCCCCCCCCCcccCCCCcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCC-C
Q psy2547 801 RRCD-RCAPGTYGFGPEGCKAC---DCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHAD-L 875 (1807)
Q Consensus 801 ~~C~-~C~~g~~~~~~~~C~~C---~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~-~ 875 (1807)
..|+ .|..|.||.++..|+.+ .|... |..|++-.+.-..| |+..-. .
T Consensus 166 ~~C~~~C~~~CWg~g~~~Cq~~~~~~C~~~---------------------------C~~~~c~~~~~~~C-Ch~~C~g~ 217 (551)
T 3i2t_A 166 PKCHESCTHGCWGEGPKNCQKFSKLTCSPQ---------------------------CAGGRCYGPKPREC-CHLFCAGG 217 (551)
T ss_dssp CCCCTTCSSCBSSSSGGGBCCCSSSSSCSS---------------------------STTCCCSSSSSSCC-CCSSEEEE
T ss_pred cCCCcccccccCCCCcccceEccCCccCCc---------------------------CCCCcccCCCCCcc-cCcccCCC
Q ss_pred CC-CCCCCccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceee--ecCCCC-
Q psy2547 876 CD-SKTGTCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVIC--ECKEGY- 950 (1807)
Q Consensus 876 Cd-~~tg~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C--~C~~g~- 950 (1807)
|. +..-.|+.|++...+..|- .|++|||-++..- +..|.-......+ ..| .||.+|
T Consensus 218 C~gp~~~~C~~C~~~~~~~~Cv~~Cp~~~~~n~~~~----~~~~np~~~y~~g---------------~~Cv~~Cp~~~~ 278 (551)
T 3i2t_A 218 CTGPTQKDCIACKNFFDEGVCKEECPPMRKYNPTTY----VLETNPEGKYAYG---------------ATCVKECPGHLL 278 (551)
T ss_dssp ESSSSSTTEEEESSEEETTEEESSCCCSEEEETTTT----EEEECTTCCEEET---------------TEEESSCCTTSE
T ss_pred CCCCCccccccchhhccCCeeeccCCchhcccccce----EEecCCCcccccc---------------ChhhhhCCHHHc
Q ss_pred -cCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q psy2547 951 -RGTRCDG-CLDNYFGNPQERGGSCEPCD 977 (1807)
Q Consensus 951 -~G~~Ce~-C~~g~~g~p~~~~~~C~~C~ 977 (1807)
.+..|-. |++||| ...+.|.||.
T Consensus 279 ~~~~~Cv~~CP~g~~----~~~~~C~~C~ 303 (551)
T 3i2t_A 279 RDNGACVRSCPQDKM----DKGGECVPCN 303 (551)
T ss_dssp EETTEEESSCCTTEE----ESSSBEEECS
T ss_pred ccCCcccccCCCCCc----ccCCeeeECC
No 345
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=75.01 E-value=90 Score=33.06 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHH
Q psy2547 1776 ELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1776 ~le~el~~L~~el~~l 1791 (1807)
++.++|.-.+.++..+
T Consensus 166 eLddkIklgeEQL~~L 181 (190)
T 3thf_A 166 DLAVRIKGSEEQLSSL 181 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhhHHHHHHH
Confidence 3334444444444433
No 346
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=74.77 E-value=20 Score=44.58 Aligned_cols=11 Identities=9% Similarity=-0.073 Sum_probs=4.2
Q ss_pred hHHHHHHHHHH
Q psy2547 1606 ADSTKNTVQKI 1616 (1807)
Q Consensus 1606 a~~l~~~l~~l 1616 (1807)
+.-+.+..+.+
T Consensus 43 ~~~ir~n~~~v 53 (501)
T 1wle_A 43 MESLCAYPEDA 53 (501)
T ss_dssp HHHHHHSHHHH
T ss_pred HHHHHhCHHHH
Confidence 33343333333
No 347
>3a5c_G V-type ATP synthase subunit D; V-ATPase, asymmetric, rotation, vacuolar type, hydrolase, ATP synthesis, ATP-binding, hydrogen ION transport; HET: ADP; 4.51A {Thermus thermophilus} PDB: 3a5d_G 3j0j_G*
Probab=74.50 E-value=91 Score=34.41 Aligned_cols=7 Identities=0% Similarity=0.069 Sum_probs=0.0
Q ss_pred hhhccCC
Q psy2547 1550 VNKNIQS 1556 (1807)
Q Consensus 1550 l~~~i~~ 1556 (1807)
....+|.
T Consensus 97 mGV~vP~ 103 (223)
T 3a5c_G 97 WGSKVPR 103 (223)
T ss_dssp -------
T ss_pred EEEEece
Confidence 3334443
No 348
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=74.25 E-value=0.5 Score=41.13 Aligned_cols=34 Identities=26% Similarity=0.774 Sum_probs=25.6
Q ss_pred CCCCCCCCCCC--CCCCCCCccCCCC--ccccCCCcc-cCCCCc
Q psy2547 1074 TGCEPCDCDPI--GSVDVTECNEYTG--QCQCKSGFG-GRQCDQ 1112 (1807)
Q Consensus 1074 ~~C~~c~C~~~--gs~~~~~C~~~tg--~C~C~~g~~-G~~C~~ 1112 (1807)
..|.+.+|.++ | +|....| .|.|++||+ |..|+.
T Consensus 12 d~C~snPC~nga~g-----tC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 12 AACSSNPCGPEAAG-----TCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CHHHHCSSCSSSCC-----EEEECSSEEEEECCTTEEEEECSSS
T ss_pred CcCcCCCCcCCCcc-----ccccCCCceEeECCCCCccCCCCCC
Confidence 45766778775 5 7875544 699999999 999864
No 349
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=74.24 E-value=0.76 Score=56.02 Aligned_cols=55 Identities=31% Similarity=0.836 Sum_probs=15.3
Q ss_pred CCcCCCC--ccccCCCcc----cccccccCCCCcccCCCCCCC-CCCCCCCCCCCCCCccCCCC--ccccCCCcc----c
Q psy2547 1041 PCDRTTG--QCPCLPNVI----GVSCDRCLKNHWKIASGTGCE-PCDCDPIGSVDVTECNEYTG--QCQCKSGFG----G 1107 (1807)
Q Consensus 1041 ~C~~~tG--~C~C~~g~~----G~~C~~C~~g~~~~~~~~~C~-~c~C~~~gs~~~~~C~~~tg--~C~C~~g~~----G 1107 (1807)
.|....| .|.|++||. |..|.. ...|. +..|.. .|....| +|.|.+||. |
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d----------~~eC~~~~~C~~-------~C~~~~g~~~C~C~~g~~l~~d~ 78 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQD----------VNECAEEGYCSQ-------GCTNSEGAFQCWCEAGYELRPDR 78 (386)
T ss_dssp ----------------------------------------------CCTT-------EEC-----CCEECCTTEEECTTS
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCc----------cceeCCcCcccC-------cCCCCCCCCeEEECCCceEcCCC
Confidence 3544443 799999998 888853 23342 233432 4554433 799999998 7
Q ss_pred CCCCc
Q psy2547 1108 RQCDQ 1112 (1807)
Q Consensus 1108 ~~C~~ 1112 (1807)
+.|..
T Consensus 79 ~~C~~ 83 (386)
T 3v65_B 79 RSCKA 83 (386)
T ss_dssp SCEEE
T ss_pred CeECC
Confidence 77753
No 350
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=74.18 E-value=0.57 Score=60.02 Aligned_cols=46 Identities=28% Similarity=0.568 Sum_probs=37.4
Q ss_pred cccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCc
Q psy2547 1049 CPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1049 C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~ 1112 (1807)
..|.+||.|.+|.. +.+|. .+|...| .|. .|+|.|.+||+|..|+.
T Consensus 520 ~~C~~gw~g~dc~i----------~~~Cp-~~C~ghG-----~C~--~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYI----------GDGCL-DMCSGHG-----RCV--QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEE----------ESCSS-GGGGGSE-----EEE--TTEEEECTTEESTTSCE
T ss_pred CccCCCcccccccc----------cCCCC-cccCCCc-----EEC--CCCEeeCCCccCCCcCc
Confidence 36899999999973 34564 3777777 898 59999999999999985
No 351
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=73.51 E-value=4.5 Score=44.26 Aligned_cols=57 Identities=12% Similarity=0.318 Sum_probs=38.4
Q ss_pred CCCccccccccCCCCCCccccccCC-CCcceeEEEeccceeEEEEEEE--EE---cCCCCCcEEEEEecC
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSEN-GVENVTIQLDMEAEFHFTHLII--YF---KTFRPAAMLIERSHD 160 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~-~~~~v~i~l~l~~~f~~~~~~~--~f---~s~rP~~~~iers~d 160 (1807)
-+.+..++|+ +..|+|||.. ..+.|||++ .+.-.|..|.| .| .|..|..+.|.--..
T Consensus 69 g~gV~~L~D~-----s~~TyWQSDG~qPH~ItI~f--~k~v~I~~L~iyvD~~~DeSYtPs~I~V~aG~~ 131 (221)
T 1gqp_A 69 GNPVDFALDD-----NYDTFWQSDGGQPHQLDIMF--SKRMDICVMAIFFSMIADESYAPSLVKVYAGHS 131 (221)
T ss_dssp TCCGGGGSSS-----CTTCCEECCSSSSEEEEEEE--EEEEEECEEEEEEEHHHHGGGSEEEEEEEEESS
T ss_pred cCCHHHhcCC-----CccceeccCCCCCeEEEEEE--cCCceEEEEEEEECCCCCCCCCCEEEEEEEeCC
Confidence 4567777774 5779999953 234455554 46555665554 45 399999999988655
No 352
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=73.46 E-value=0.56 Score=47.91 Aligned_cols=56 Identities=25% Similarity=0.654 Sum_probs=34.8
Q ss_pred CCCCCcCCCCcccCCCCCCCCcccCC-CCC-CCCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccC
Q psy2547 438 GRRCDMCKDGFWNFNETNPNGCEPCT-CNI-QGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLS 504 (1807)
Q Consensus 438 G~~Cd~C~~g~~~~~~~~~~gC~~C~-C~~-~Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~ 504 (1807)
...|..|.+|+|....+....|.+|. |+. .|.+-...|... .-+.|. |++|||-..
T Consensus 36 ~t~C~pC~~gtys~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t----------~dtvC~-C~~G~~c~~ 93 (134)
T 4fhq_A 36 GTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRT----------ENAVCG-CSPGHFCIV 93 (134)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCGGGTEEEEECCCSS----------SCCEEE-ECTTEEEEE
T ss_pred CCcccCCCCCCEecCCCCCCcCcCCCCCCccCCeEEeccCCCC----------CCcccc-CCCCCEecC
Confidence 45788999998875444456788885 775 344332235542 224564 888888543
No 353
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=73.36 E-value=29 Score=36.27 Aligned_cols=15 Identities=13% Similarity=0.042 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1710 QASGLRSRYQETDNK 1724 (1807)
Q Consensus 1710 ~l~el~~~l~~~~~~ 1724 (1807)
.+.++....+.+...
T Consensus 135 rl~eL~~~W~~L~~~ 149 (161)
T 3lbx_A 135 HIEELRHLWDLLLEL 149 (161)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 354
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=73.36 E-value=1.1 Score=40.83 Aligned_cols=27 Identities=33% Similarity=0.870 Sum_probs=19.0
Q ss_pred CccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 931 DTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 931 ~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
++|..........|.|++||+|.+||.
T Consensus 51 G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 51 GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CEeeeecCCCCeEEEcCCCcccccccc
Confidence 356322222357899999999999983
No 355
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=73.30 E-value=2.8 Score=44.04 Aligned_cols=55 Identities=18% Similarity=0.343 Sum_probs=42.4
Q ss_pred ccccccCCCCcceeEEEeccceeEEEEEEEEEc-C----CCCCcEEEEEecCCCCCccchh
Q psy2547 114 ISWWQSENGVENVTIQLDMEAEFHFTHLIIYFK-T----FRPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 114 ~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~-s----~rP~~~~iers~d~g~~w~~~q 169 (1807)
..+|.+.....+--|++||++...|+-|+++-. + .--.++.|+=|.| |.+|.+|.
T Consensus 47 ~~aW~a~~~d~~qwLqVDLg~~~~VtgV~tqG~~~~~~~~~v~~y~l~yS~D-g~~W~~~~ 106 (159)
T 3hny_M 47 SNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQD-GHQWTLFF 106 (159)
T ss_dssp SCSBCCSSCSTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS-SSSCEECE
T ss_pred CCccCCCCCCCCCeEEcccCCcEEEEEEEeecCCCCCccceEEEEEEEEEEC-CCcEEEEe
Confidence 467887766567789999999999999999853 1 2234566888888 89999874
No 356
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=73.23 E-value=0.7 Score=62.50 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccccCCC----Ccc-eeEEEeccceeEEEEEEEEEcC------CCCCcEEEEEecCCCCCc
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENG----VEN-VTIQLDMEAEFHFTHLIIYFKT------FRPAAMLIERSHDFGKTW 165 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~----~~~-v~i~l~l~~~f~~~~~~~~f~s------~rP~~~~iers~d~g~~w 165 (1807)
.+|+++++|. +..|||.|.-. ..+ ..|+|||+++..|+.|.+.-.. .++..+-|+=|.|.|.+|
T Consensus 1243 eg~A~nAIDG-----D~~T~WHSaWs~ss~~~PgqWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nW 1317 (1376)
T 2zxq_A 1243 EGPADLAQDG-----NDSTHWHTSWSENAVGNGTAWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTK 1317 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHcCcC-----CCCCeEEecccccCCCCCceEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeE
Confidence 5788999995 56799988722 123 6799999999999988765421 256778899999459999
Q ss_pred cchh
Q psy2547 166 QVYR 169 (1807)
Q Consensus 166 ~~~q 169 (1807)
+++.
T Consensus 1318 ttVa 1321 (1376)
T 2zxq_A 1318 DVVT 1321 (1376)
T ss_dssp ----
T ss_pred EEEE
Confidence 8763
No 357
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=72.77 E-value=15 Score=34.72 Aligned_cols=65 Identities=12% Similarity=0.185 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1608 STKNTVQKIVDVL-TEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERL 1676 (1807)
Q Consensus 1608 ~l~~~l~~l~~~L-~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~l 1676 (1807)
+++.++..+-..| ..+....+.++.+|++++.+|..++. ++...+.++.+..-++.+|+.+.+..
T Consensus 29 QVQqELs~tfarLc~~Vd~t~~eL~~EI~~L~~eI~~LE~----iqs~aK~LRnKA~~L~~eLe~F~~~y 94 (96)
T 1t3j_A 29 QVQQEMATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEK----MQNNSKLLRNKAVQLESELENFSKQF 94 (96)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHHHHHHh
No 358
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=72.67 E-value=2 Score=43.07 Aligned_cols=58 Identities=26% Similarity=0.622 Sum_probs=35.7
Q ss_pred CCCCCCCCCCCCCccCC---CC--ccccCCCcccCCCCcCCCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCc
Q psy2547 1079 CDCDPIGSVDVTECNEY---TG--QCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGI 1153 (1807)
Q Consensus 1079 c~C~~~gs~~~~~C~~~---tg--~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~ 1153 (1807)
|+|.++| +|... .+ .|.|++||+|..|+.=.. ..|. . | +-...++.+..++
T Consensus 1 ~pC~ngg-----tC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-------~~C~-----~-g------~G~~YrG~~~~t~ 56 (122)
T 2fd6_A 1 CDCLNGG-----TCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-------KTCY-----E-G------NGHFYRGKASTDT 56 (122)
T ss_dssp CCCCSSC-----EEEECTTTTTCEEEECCTTEESTTSCEESS-------CCSB-----C-S------SCTTCCSCCCBBT
T ss_pred CCCCCcC-----CcCCCcccCCCCCccCCCCCCCccccccCc-------CCCc-----c-c------ccccceeeccccc
Confidence 4677766 77543 32 699999999999985100 0121 1 0 0134466677788
Q ss_pred cccCCCc
Q psy2547 1154 GGVRCDT 1160 (1807)
Q Consensus 1154 ~G~~C~~ 1160 (1807)
+|..|..
T Consensus 57 sG~~Cq~ 63 (122)
T 2fd6_A 57 MGRPCLP 63 (122)
T ss_dssp TSCBBCC
T ss_pred cCCcccC
Confidence 8887774
No 359
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=72.04 E-value=11 Score=33.60 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1760 LNETEAMFNSQESELTELSKNI 1781 (1807)
Q Consensus 1760 l~~Le~~i~~~e~~le~le~el 1781 (1807)
|++++.+|.+.+..+..+..++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 360
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=71.85 E-value=59 Score=30.35 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=10.2
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q psy2547 1554 IQSNPEQIRERANEINNVI 1572 (1807)
Q Consensus 1554 i~~~~~~I~~l~~~i~~~~ 1572 (1807)
|..++++|+.++..+....
T Consensus 7 i~v~~~~l~~~A~~~~~~~ 25 (99)
T 3zbh_A 7 IRLTPEELRGVARQYNVES 25 (99)
T ss_dssp --CCHHHHHHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHHHHH
Confidence 4455666666666555544
No 361
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=71.71 E-value=2 Score=55.48 Aligned_cols=81 Identities=21% Similarity=0.529 Sum_probs=45.9
Q ss_pred CCCccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCc---CCCC
Q psy2547 880 TGTCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYR---GTRC 955 (1807)
Q Consensus 880 tg~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~---G~~C 955 (1807)
...|+.|++...+..|. .|++|||.++.. ..|.++| .+ .-.|...|.. .||.+|. +..|
T Consensus 221 ~~~C~aC~~~~~~g~Cv~~CP~~~~y~~~~---~~~~~np--~~---~y~~~~~Cv~---------~Cp~~~~~~~~g~C 283 (624)
T 1yy9_A 221 ESDCLVCRKFRDEATCKDTCPPLMLYNPTT---YQMDVNP--EG---KYSFGATCVK---------KCPRNYVVTDHGSC 283 (624)
T ss_dssp TTCBSSBSSEESSSCEESSCCCSEEEETTT---TEEEECT--TC---CEEETTEEES---------SCCTTCEECTTSBE
T ss_pred cCcccccccCccCCcccccCCCcccccccc---eeeecCc--cc---ccccchhhhc---------cCCcccEeccCCeE
Confidence 34688899988888884 799998877642 2344332 11 0011122320 4666654 3467
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCC
Q psy2547 956 D-GCLDNYFGNPQERGGSCEPCD 977 (1807)
Q Consensus 956 e-~C~~g~~g~p~~~~~~C~~C~ 977 (1807)
- .|++|||.+.......|+||.
T Consensus 284 v~~CP~g~~~~~~~~~~~C~~C~ 306 (624)
T 1yy9_A 284 VRACGADSYEMEEDGVRKCKKCE 306 (624)
T ss_dssp ESSCCTTEEEEESSSCEEEEECS
T ss_pred eccCCCCCccccCCCCcccccCC
Confidence 6 488888765322224576663
No 362
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=71.63 E-value=50 Score=31.03 Aligned_cols=20 Identities=25% Similarity=0.410 Sum_probs=12.0
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q psy2547 1554 IQSNPEQIRERANEINNVIK 1573 (1807)
Q Consensus 1554 i~~~~~~I~~l~~~i~~~~~ 1573 (1807)
|..++++|+..+..+.....
T Consensus 6 i~V~~e~l~~~A~~~~~~~~ 25 (98)
T 3gwk_C 6 IKLTPEELRSSAQKYTAGSQ 25 (98)
T ss_dssp BCSCHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHH
Confidence 44566777776666655443
No 363
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Probab=71.37 E-value=71 Score=40.21 Aligned_cols=18 Identities=17% Similarity=0.243 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy2547 1780 NIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1780 el~~L~~el~~l~~~I~~ 1797 (1807)
.+..|..++..+...|-.
T Consensus 175 ~~~~l~~~~~~ll~~Lv~ 192 (596)
T 1bg1_A 175 HRPMLEERIVELFRNLMK 192 (596)
T ss_dssp THHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 344555555555555443
No 364
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=71.22 E-value=1.3e+02 Score=33.22 Aligned_cols=180 Identities=10% Similarity=0.057 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHhhC
Q psy2547 1467 TSKKLINEKEAKAEEVFRGITT--AKQESHAANILAKEAYDHAASVRNKTAAY----------VASTSNITKQLDEFLNA 1534 (1807)
Q Consensus 1467 ~a~~~l~~~~~~~~~l~~~~~~--~~~~~~~a~~~A~~~~~~a~~~~~~~e~~----------~~~~~~l~~~lk~~l~~ 1534 (1807)
......-+.-.+.-.++.++.+ -..++.+...+..+...++..+..++... +..+-.|+..+.+.
T Consensus 30 ~ll~~~a~~v~~~a~~L~~~l~~~~~~~~~~~~~~I~~lE~~aD~i~~~i~~~L~~~fitP~dReDI~~L~~~lDdI--- 106 (227)
T 3l39_A 30 PLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFDREDIHDLASCMDDV--- 106 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSCHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCHHHHHHHHHHHHHH---
Q ss_pred CCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy2547 1535 PGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQ 1614 (1807)
Q Consensus 1535 ~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~ 1614 (1807)
.+.++.++..+.-..+...+..+.++++.+.+....+..+-..+...+.....+.++..+++.++.++..+. .
T Consensus 107 ----~D~ie~~a~~l~l~~~~~~~~~~~~l~~~i~~~~~~l~~ai~~L~~~~~~~~~i~~~~~eI~~lE~eaD~l~---~ 179 (227)
T 3l39_A 107 ----IDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVY---E 179 (227)
T ss_dssp ----HHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred ----HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH---H
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1615 KIVDVLTEAR-TAQDMAEVAIQTAKDDISAARKDLSQITNDLDDA 1658 (1807)
Q Consensus 1615 ~l~~~L~~a~-~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~ 1658 (1807)
++...|=... ..++..+ +.++-..|..+-...+.+-+.++.+
T Consensus 180 ~~~~~Lf~~e~d~i~~i~--~keI~~~Le~~aD~~Edva~~l~~I 222 (227)
T 3l39_A 180 LFITKLFEEEKDCIELIK--IKEIMHELEKTTDAAEHVGKILKNL 222 (227)
T ss_dssp HHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
No 365
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=71.14 E-value=1.1 Score=57.89 Aligned_cols=88 Identities=26% Similarity=0.509 Sum_probs=43.2
Q ss_pred CccCCCCCccCCCCC-cCCCCcccCCCCCCCCCCcCCC--CCCCCCCCCccCCccccCCCCCceee-ecCCCCcCCCCC-
Q psy2547 882 TCISCRNSTDGENCE-RCINGYYGDPRLGIDIPCRPCP--CPGTVESGLSYADTCQLDPRSQDVIC-ECKEGYRGTRCD- 956 (1807)
Q Consensus 882 ~C~~C~~~~~G~~Ce-~C~~G~~G~~~~~~~~~C~~c~--C~~~~~~~~~~~~~C~~~~~~~~~~C-~C~~g~~G~~Ce- 956 (1807)
.|+.|++...+..|- .|+.|||....-.....|++|. |.... +-..+|... +...| .|+....|..|-
T Consensus 495 ~C~sC~~~~~~~~Cv~~Cp~~~~~~~~~~~~~~C~~Ch~~C~~~~----~~~~tC~Gp---~~~~C~~C~~~~~~~~Cv~ 567 (617)
T 2ahx_A 495 QCLSCRRFSRGRICIESCNLYDGEFREFENDSICVECDPQCEKME----DGLLTCHGP---GPDNCTKCSHFKDGPNCVE 567 (617)
T ss_dssp SBSSBSSEEETTEEESCCSSSSSSSCEEEETTEEEECCTTBCCCC----TTCCSBSSS---STTSBSSBSSEEETTEEES
T ss_pred hhhhccccccCCeeccccCCCcCcccccCCCCchhhcChhhhccc----cCCCccCCC---CCCccccCcccccCCceec
Confidence 455666555555663 5777654221100123455543 22100 001234311 12356 777666788886
Q ss_pred CCCCCCCCCCC------CCCCCCCCC
Q psy2547 957 GCLDNYFGNPQ------ERGGSCEPC 976 (1807)
Q Consensus 957 ~C~~g~~g~p~------~~~~~C~~C 976 (1807)
.|++|||++.. .....|++|
T Consensus 568 ~CP~G~~~~~~~~~~y~~~~~~C~~C 593 (617)
T 2ahx_A 568 KCPDGLQGANSFIFKYADPDRECHPC 593 (617)
T ss_dssp SCCEEEEBSSSEEEEEECTTSBEEEC
T ss_pred cCCCCcccccccceeccCCCCccccc
Confidence 69999986521 123567765
No 366
>1i6z_A BAG-family molecular chaperone regulator-1; triple helix bundle; NMR {Mus musculus} SCOP: a.7.7.1
Probab=70.82 E-value=81 Score=31.59 Aligned_cols=30 Identities=3% Similarity=-0.006 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1768 NSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1768 ~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
+.+-..++.+-.+-..+.+++.+..+.|+.
T Consensus 99 K~lV~~iQ~~L~~~D~l~~~~~~~~~~~q~ 128 (135)
T 1i6z_A 99 KNLVKKVQVFLAECDTVEQYICQETERLQS 128 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444555555555555555555555543
No 367
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=70.67 E-value=1.9 Score=49.55 Aligned_cols=15 Identities=33% Similarity=1.145 Sum_probs=14.2
Q ss_pred CcccCCCCcccCCCC
Q psy2547 790 GNCVCKPNVVGRRCD 804 (1807)
Q Consensus 790 g~C~C~~~~~G~~C~ 804 (1807)
|.|.|.+||+|..|+
T Consensus 207 G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 207 GICRCDTGYIGKNCE 221 (280)
T ss_dssp TEEEECTTEESTTSC
T ss_pred CceeCCCCCcCCcce
Confidence 789999999999997
No 368
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=70.62 E-value=28 Score=32.32 Aligned_cols=14 Identities=14% Similarity=0.263 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q psy2547 1783 ELQKRIQSCINFIV 1796 (1807)
Q Consensus 1783 ~L~~el~~l~~~I~ 1796 (1807)
.|+.+|..++.-|.
T Consensus 67 ~Le~EIatYRkLLE 80 (86)
T 1x8y_A 67 ALDMEIHAYRKLLE 80 (86)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHc
Confidence 44444444444443
No 369
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=70.30 E-value=2e+02 Score=34.95 Aligned_cols=289 Identities=11% Similarity=0.045 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhh
Q psy2547 1498 ILAKEAYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTD 1577 (1807)
Q Consensus 1498 ~~A~~~~~~a~~~~~~~e~~~~~~~~l~~~lk~~l~~~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~ 1577 (1807)
+.|++.+..+-.+..++-..-.....+---+..-....-...+--+.++..|+...+-....-.+.|.--=..+..+|.+
T Consensus 22 ~takkiy~~iG~aa~R~aeSEiGsaaIdG~vQGsv~S~lTGes~GesvKqAVilNV~G~~~~~pDPLsPgE~~~~~Kl~e 101 (526)
T 3iyk_A 22 NTAKKIYSTIGKAAERFAESEIGSAAIDGLVQGSVHSIITGESYGESVKQAVLLNVLGSGEEIPDPLSPGERGIQAKLKE 101 (526)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHhHHHHhHHHHhHHHHHhcccchHHHHHHHHHHHhcccCCCCCCCCCHhHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1578 IDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDD 1657 (1807)
Q Consensus 1578 ~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~ 1657 (1807)
++.....-.-.....+.+.++ .-.+++++.+-+..-...-..-+++++.++++++....-++.-+++|+.+...|.
T Consensus 102 LE~e~k~d~~~~khn~~I~~k---~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~- 177 (526)
T 3iyk_A 102 LEDEQRNELVRLKYNDKIKEK---FGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQ- 177 (526)
T ss_pred HHHHHhhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy2547 1658 AQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAM-DVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKR 1736 (1807)
Q Consensus 1658 ~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~-~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~ 1736 (1807)
.+...+-.+=.+-+++++.++..+++.++ +-+.-.++|.++......++-|....--=+--.--...-......
T Consensus 178 -----kE~~~Rt~dE~~mi~~yr~k~~aL~~aIe~Er~~~~EEAIqe~~dmsaeI~E~AaeEVP~vGag~At~iATaRai 252 (526)
T 3iyk_A 178 -----KEIGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAI 252 (526)
T ss_pred -----HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1737 ARGQMLLNKASQLSVNTTAKL-------KQLNETEAM------FNSQESELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1737 ~r~~~l~~~a~~l~~~~~~~~-------~~l~~Le~~------i~~~e~~le~le~el~~L~~el~~l~~~I 1795 (1807)
..+-+|.+-+.+|..---..+ .-|+.+-.. =..+..-+..+.+-+++++.|++-+.++|
T Consensus 253 eg~yKLkkvI~aLtGidlsHl~~P~I~p~~iet~L~~~~~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i 324 (526)
T 3iyk_A 253 EGAYKLKKVINALSGIDLTHLRTPKIEPSVVSTILEYRAKEIPDNALAVSVLSKNRAIQENHKELMHIKNEI 324 (526)
T ss_pred HHHHHHHHHHHHHhCCCchhccCCCCCHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 370
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=70.12 E-value=1.1 Score=45.42 Aligned_cols=79 Identities=25% Similarity=0.546 Sum_probs=0.0
Q ss_pred CCCCcCCCC-cccCCCCCCCCcccCC-CCCCCCcCCCCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccC--
Q psy2547 439 RRCDMCKDG-FWNFNETNPNGCEPCT-CNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC-- 514 (1807)
Q Consensus 439 ~~Cd~C~~g-~~~~~~~~~~gC~~C~-C~~~Gs~~~~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C-- 514 (1807)
..|..|.+| +|-...+....|.+|. |++ |.+-...|....- +.|. |++|||-..... ..|.+|
T Consensus 39 t~C~pC~~g~ty~~~~n~~~~C~~C~~C~~-g~~~~~~Ct~t~d----------tvC~-C~~G~y~~~~~~-~~C~~C~t 105 (130)
T 1du3_A 39 RDCISCKYGQDYSTHWNDLLFCLRCTRCDS-GEVELSPCTTTRN----------TVCQ-CEEGTFREEDSP-EMCRKCRT 105 (130)
T ss_dssp SCEEECCTTTEECCSSBCCSSCEECCCCCT-TEEEEECCCSSSC----------CEEE-ECTTCEEETTEE-EEEEC---
T ss_pred CcCccCCCcCEEeCCCCCCCcCcCCCCCCc-ceeeeccCCCCCC----------CEec-CCCCeEECCCCC-CcCcCCcC
Q ss_pred CCCCCCCCCCCCcccC
Q psy2547 515 DCDPGASYDNNCDVIS 530 (1807)
Q Consensus 515 ~C~~~g~~~~~C~~~t 530 (1807)
.|..|-.+...|...+
T Consensus 106 ~C~~G~~~~~~ct~~~ 121 (130)
T 1du3_A 106 GCPRGMVKVGDCTPWS 121 (130)
T ss_dssp ----------CCCSSS
T ss_pred cCCcCCEEeeCCCCCC
No 371
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=70.05 E-value=43 Score=33.72 Aligned_cols=87 Identities=8% Similarity=0.124 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-----HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q psy2547 1576 TDIDTILTETAGDLAKANDLKRKAN-----LTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTA---KDDISAARKD 1647 (1807)
Q Consensus 1576 ~~~~~~l~~~~~~l~~a~~L~~~a~-----~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a---~~~i~~~~~~ 1647 (1807)
+++.+.+..++.....-..+..... .+.....+|+..+..++..|++++.++..+++.-..- ..+|..-++-
T Consensus 34 ~EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~Rr~f 113 (130)
T 4dnd_A 34 GEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVF 113 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHH
Q psy2547 1648 LSQITNDLDDAQQKS 1662 (1807)
Q Consensus 1648 l~~ie~~l~~~e~~l 1662 (1807)
+..++.++..++.+|
T Consensus 114 V~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 114 VERMREAVQEMKDHM 128 (130)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
No 372
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=69.90 E-value=37 Score=32.54 Aligned_cols=62 Identities=8% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1641 ISAARKDLSQITNDLDDAQQKSNETNVKVKL-----LQERLKSIQAGFLQNGRSAMDVENEEKNLEK 1702 (1807)
Q Consensus 1641 i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~-----l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~ 1702 (1807)
|++++.+|...+.+|..+..+|.+++...+. -+.-+..-+..+..++.++.+++..+.++..
T Consensus 24 ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~~Vs~lq~KiaeLKrqLAd~va 90 (113)
T 4fi5_A 24 MEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDELKRQLADRIA 90 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 373
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=69.75 E-value=24 Score=33.88 Aligned_cols=69 Identities=9% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1655 LDDAQQKSNETNVKVKLLQERLKSIQAGFLQN-----GRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1655 l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~-----~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
+++++.++...+.+|.....+|++.+..++.+ +..+..-+..+..++.++.++++.+.+.....+....
T Consensus 24 ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~~Vs~lq~KiaeLKrqLAd~va~~k~~~k 97 (113)
T 4fi5_A 24 MEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDELKRQLADRIATGKNLGK 97 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
No 374
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=69.46 E-value=54 Score=36.10 Aligned_cols=184 Identities=10% Similarity=0.046 Sum_probs=0.0
Q ss_pred HHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy2547 1542 IRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLT 1621 (1807)
Q Consensus 1542 i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~ 1621 (1807)
|...-..+...+...+...++.+.++...+...|......+..+......... .....+......+...-+.+.....
T Consensus 36 l~e~e~~l~s~d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~--~~~~~i~~~~~~l~~~~~~L~~~~~ 113 (224)
T 2iak_A 36 VDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA--PLKLSYTDKLHRLESQYAKLLNTSR 113 (224)
T ss_dssp HHHHHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT--THHHHHHHHHHHHHHHHHHTTTHHH
T ss_pred HHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chhHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q psy2547 1622 EARTAQDMAEVAIQTAKDDISAARKDLSQ-ITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVEN----E 1696 (1807)
Q Consensus 1622 ~a~~~~~~a~~~l~~a~~~i~~~~~~l~~-ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~----~ 1696 (1807)
.-...++.+..-..++...+.=+..+... ....+..-...+..+..+-+.|+.+|+..+..+..+......+.. .
T Consensus 114 ~R~~~Le~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~~ 193 (224)
T 2iak_A 114 NQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPA 193 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCc
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1697 EKNLEKEVALAQKQASGLRSRYQETDNKLLS 1727 (1807)
Q Consensus 1697 ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~ 1727 (1807)
+..++..++.+...-..|.+.....+..|++
T Consensus 194 ~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 194 RLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 375
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=69.31 E-value=29 Score=32.00 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1637 AKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQ 1708 (1807)
Q Consensus 1637 a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae 1708 (1807)
++..+..++..+......+-++..+++.+..+|..|+..++++..++.++.++-.++-..++........+.
T Consensus 4 ~e~rv~~LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~~~~~~~ 75 (83)
T 2xdj_A 4 VEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQ 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
No 376
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=69.25 E-value=46 Score=34.69 Aligned_cols=122 Identities=15% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy2547 1672 LQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSV 1751 (1807)
Q Consensus 1672 l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~ 1751 (1807)
+..+++.+......+...+.+....++++. ++......++++..=+.+....+.. ... .....+..+..+-+.+..
T Consensus 27 I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~--~~~-~d~~~v~~ll~kH~afe~ 102 (161)
T 3lbx_A 27 IQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTD--KSY-EDPTNIQGKYQKHQSLEA 102 (161)
T ss_dssp GGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT--TSC-CSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC--CCc-CCHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1752 NTTAKLKQLNETEAMFNSQ-----------ESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1752 ~~~~~~~~l~~Le~~i~~~-----------e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
++......++.+...=+.+ ..+++++...=..|..........|.+
T Consensus 103 El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~e 159 (161)
T 3lbx_A 103 EVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLR 159 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 377
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=68.89 E-value=39 Score=31.66 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1640 DISAARKDLSQITNDLDDAQQKSNETNVKVKL-----LQERLKSIQAGFLQNGRSAMDVENEEKNLEK 1702 (1807)
Q Consensus 1640 ~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~-----l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~ 1702 (1807)
+|++++.+|...+.+|..+..+|.+++...+. -..-+..-+..+..++.++.+++..+.++..
T Consensus 6 ~i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~~~V~~lq~Ki~elkr~lAd~v~ 73 (96)
T 2ic9_A 6 TLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLIA 73 (96)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 378
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=68.53 E-value=58 Score=31.65 Aligned_cols=80 Identities=9% Similarity=0.035 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1646 KDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1646 ~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
+..++.-+++++-.+++.+++..+.++..-..++...+.+..+.++.++..++.+....+.+.+++.+..+--+...++.
T Consensus 7 ~~a~~~l~~i~eR~~eI~~Ie~~I~eL~~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA~~yqk~~rkk~ 86 (109)
T 3hd7_B 7 SISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKK 86 (109)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
No 379
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=68.52 E-value=1.6 Score=36.77 Aligned_cols=36 Identities=28% Similarity=0.690 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCcc--CCCC--ccccCCCcccCCCCcCCCCcc
Q psy2547 1078 PCDCDPIGSVDVTECN--EYTG--QCQCKSGFGGRQCDQCQTNFW 1118 (1807)
Q Consensus 1078 ~c~C~~~gs~~~~~C~--~~tg--~C~C~~g~~G~~C~~C~~g~~ 1118 (1807)
..+|.++| +|. ...+ .|.|++||+|.+|+.=...+|
T Consensus 11 ~~pC~nGG-----~C~~~~~~~~~~C~C~~GytG~~Ce~~~~~~~ 50 (53)
T 1nql_B 11 DGYCLHDG-----VCMYIEALDKYACNCVVGYIGERCQYRDLKWW 50 (53)
T ss_dssp CCEECTTC-----EEEEETTTTEEEEEECTTEESTTSCEECSSCC
T ss_pred CCCCCCCe-----EEeeecCCCCEEEecCCCCcCCCCCcCCcccc
No 380
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Probab=68.33 E-value=65 Score=40.57 Aligned_cols=156 Identities=12% Similarity=0.183 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHH
Q psy2547 1632 VAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQER-----------------LKSIQAGFLQNGRSAMDVE 1694 (1807)
Q Consensus 1632 ~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~-----------------le~lk~~l~~~~~~~~~a~ 1694 (1807)
++..+++..+++++..+..++++++.++...+...-+.+.+..+ ...++..+..+..+..++.
T Consensus 13 ~k~~ei~~~v~~lr~~~q~~e~~ik~Le~~Qe~f~~~yk~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~R~e~~ 92 (596)
T 1bg1_A 13 EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIV 92 (596)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---------CCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Q psy2547 1695 NEEKNLEKEVALAQKQ-ASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMF----NS 1769 (1807)
Q Consensus 1695 ~~ae~a~~~a~~ae~~-l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i----~~ 1769 (1807)
.+...+...++.+... +.+-..+.+ .++++.-.-.-.+...++++.--+...+..-++...++++++|..++ .-
T Consensus 93 ~k~~~~l~~~~~lq~~ll~~EL~eWK-rrQq~a~iG~p~~~~LD~lQ~w~e~lae~l~q~rqql~~l~~l~~k~~~~~dp 171 (596)
T 1bg1_A 93 SELAGLLSAMEYVQKTLTDEELADWK-RRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP 171 (596)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHH-HHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHhhcCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2547 1770 QESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1770 ~e~~le~le~el~~L~~el 1788 (1807)
....+..+.+++..|-+.+
T Consensus 172 i~~~~~~l~~~~~~ll~~L 190 (596)
T 1bg1_A 172 IVQHRPMLEERIVELFRNL 190 (596)
T ss_dssp TTTTHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHH
No 381
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=68.25 E-value=25 Score=32.70 Aligned_cols=85 Identities=11% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1701 EKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKN 1780 (1807)
Q Consensus 1701 ~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~e 1780 (1807)
..+++.++.....++..+.+++..... ++......+..+..++..+..+++.++++.+.|-+-.-.++.+|..+..=
T Consensus 2 ~~eie~L~~q~~~Le~~l~e~E~~~~~---~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkL 78 (86)
T 1x8y_A 2 SCQLSQLQCQLAAKEAKLRDLEDSLAR---ERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKL 78 (86)
T ss_dssp ----------CTTHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q ss_pred HHHHHHHH
Q psy2547 1781 IAELQKRI 1788 (1807)
Q Consensus 1781 l~~L~~el 1788 (1807)
++.-+.++
T Consensus 79 LEGEe~Rl 86 (86)
T 1x8y_A 79 LEGEEERL 86 (86)
T ss_dssp HHHHHCC-
T ss_pred HcCCcccC
No 382
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=68.01 E-value=12 Score=46.32 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy2547 1669 VKLLQERLKSIQAGFLQNGR-SAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKAS 1747 (1807)
Q Consensus 1669 l~~l~~~le~lk~~l~~~~~-~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~ 1747 (1807)
++-+.+..+.+++.+..-.. ...++..++-++-.+...++.++++++.+.+.+.+++.+++..- ..+.+|.++++
T Consensus 4 ~~~~r~n~~~~~~~~~~R~~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~----~~~~~l~~~~~ 79 (455)
T 2dq0_A 4 IKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKG----EPVDELLAKSR 79 (455)
T ss_dssp HHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC----CCTHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----ccHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1748 QLSVNTTAKLKQLNETEAMFNSQESEL 1774 (1807)
Q Consensus 1748 ~l~~~~~~~~~~l~~Le~~i~~~e~~l 1774 (1807)
.+.+++.....++.++++++..+...|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i 106 (455)
T 2dq0_A 80 EIVKRIGELENEVEELKKKIDYYLWRL 106 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
No 383
>4efa_E V-type proton ATPase subunit E; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_J 2kz9_A
Probab=67.90 E-value=1.5e+02 Score=32.75 Aligned_cols=112 Identities=10% Similarity=0.050 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy2547 1663 NETNVKVKLLQERLK-SIQAGFLQNGRSAM-DVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQ 1740 (1807)
Q Consensus 1663 ~~~e~~l~~l~~~le-~lk~~l~~~~~~~~-~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~ 1740 (1807)
+++..+|+.+...|. +.+.+..++..+++ ++......+..++...-...-+-..+-.++..+.......+......+.
T Consensus 11 ~~v~~~i~~m~~fI~qEA~eKA~EI~~kAeeE~~~ek~~~v~~~~~~i~~~~ek~~kq~e~~~~i~~S~~~~~aR~~vL~ 90 (233)
T 4efa_E 11 NQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKAMLSQQITKSTIANKMRLKVLS 90 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1741 MLLNKASQLSVNTTAKLKQLNETEAMFNSQESEL 1774 (1807)
Q Consensus 1741 ~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~l 1774 (1807)
.-++-+..+..++.+++..+..-...+..+...|
T Consensus 91 ar~e~i~~v~~~a~~~L~~~~~d~~~Y~~lL~~L 124 (233)
T 4efa_E 91 AREQSLDGIFEETKEKLSGIANNRDEYKPILQSL 124 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
No 384
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=67.87 E-value=17 Score=37.71 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---------------------------------
Q psy2547 1591 KANDLKRKANLTKAGADSTKNTVQKI---VDVLTEARTAQDMAEVAI--------------------------------- 1634 (1807)
Q Consensus 1591 ~a~~L~~~a~~a~~ea~~l~~~l~~l---~~~L~~a~~~~~~a~~~l--------------------------------- 1634 (1807)
.+..+....+.++.++..+...+..+ ...+.+.+.+++.++.--
T Consensus 10 ~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~v~lG~g 89 (151)
T 2zdi_C 10 ELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAIVSVGSG 89 (151)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEEEEeCCC
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1635 ----QTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGF 1683 (1807)
Q Consensus 1635 ----~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l 1683 (1807)
..+.+.++-++++++.++..++.++..+..+..++..++..|..+...+
T Consensus 90 ~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~~~ 142 (151)
T 2zdi_C 90 YAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQKQ 142 (151)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred eEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 385
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=67.75 E-value=1.5 Score=46.11 Aligned_cols=39 Identities=23% Similarity=0.646 Sum_probs=0.0
Q ss_pred CCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCC---CCCC
Q psy2547 912 IPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCD---GCLD 960 (1807)
Q Consensus 912 ~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce---~C~~ 960 (1807)
..|.+-+|.++ ++|..... .+.|.|++||+|.+|| .|++
T Consensus 120 ~~c~~~~C~~~--------g~C~~~~~--~~~c~C~~g~~G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQ--------GECLETIG--NYTCSCYPGFYGPECEYVRDDDD 161 (162)
T ss_dssp CCCCTTGGGGS--------EEEEECSS--SEEEEECTTEESTTSCEECC---
T ss_pred CCCcCCCCCCC--------CEEecCCC--CceEeCCCCCcCcccccCcccCC
No 386
>4efa_E V-type proton ATPase subunit E; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_J 2kz9_A
Probab=67.72 E-value=1.5e+02 Score=32.72 Aligned_cols=117 Identities=10% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1677 KSIQAGFLQNGRSAM-DVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTA 1755 (1807)
Q Consensus 1677 e~lk~~l~~~~~~~~-~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~ 1755 (1807)
++++.++.+...-+. +|+++++++..+|++ +.......+.++........-+...+...++.++..-....+.
T Consensus 11 ~~v~~~i~~m~~fI~qEA~eKA~EI~~kAee------E~~~ek~~~v~~~~~~i~~~~ek~~kq~e~~~~i~~S~~~~~a 84 (233)
T 4efa_E 11 NQVNDELNKMQAFIRKEAEEKAKEIQLKADQ------EYEIEKTNIVRNETNNIDGNFKSKLKKAMLSQQITKSTIANKM 84 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2547 1756 KLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKS 1799 (1807)
Q Consensus 1756 ~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~~ 1799 (1807)
+++.|.+-++-++.......+....+..-..++..++..|-.+.
T Consensus 85 R~~vL~ar~e~i~~v~~~a~~~L~~~~~d~~~Y~~lL~~Li~ea 128 (233)
T 4efa_E 85 RLKVLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVEA 128 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
No 387
>1ek9_A Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli} SCOP: f.5.1.1 PDB: 1tqq_A 2vde_A 2vdd_A 2wmz_A* 2xmn_A*
Probab=67.61 E-value=2.1e+02 Score=34.22 Aligned_cols=233 Identities=8% Similarity=0.011 Sum_probs=0.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Q psy2547 1570 NVIKSLTDIDTILTETAGDLAKAND-LKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQT---AKDDISAAR 1645 (1807)
Q Consensus 1570 ~~~~~L~~~~~~l~~~~~~l~~a~~-L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~---a~~~i~~~~ 1645 (1807)
.....++.+......++..+..... +..++..+--++...+..+.-+++.+..++..++.++...+. ...++..++
T Consensus 79 ~~~~~~~~a~~~~~~a~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~d~~~a~ 158 (428)
T 1ek9_A 79 SKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR 158 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1646 KDLSQITNDLDDAQQKSNETNVKVKL---------------------------LQERLKSIQAGFLQNGRSAMDVENEEK 1698 (1807)
Q Consensus 1646 ~~l~~ie~~l~~~e~~l~~~e~~l~~---------------------------l~~~le~lk~~l~~~~~~~~~a~~~ae 1698 (1807)
.++..++..+..++..+..+...|.. +....-.-.-.+...+..++.++.+++
T Consensus 159 ~~~~~~~~~l~~a~~~~~~a~~~L~~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~p~l~~a~~~~~~a~~~~~ 238 (428)
T 1ek9_A 159 AQYDTVLANELTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIR 238 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSEEEEECTTTCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccCCCCCcCHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q ss_pred HHHH-------------------------------------------------------HHHHHHHHHHHHHHHHHHHHH
Q psy2547 1699 NLEK-------------------------------------------------------EVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1699 ~a~~-------------------------------------------------------~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
.++. .....+....+++....+.+.
T Consensus 239 ~a~~~~~P~l~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~s~plf~~g~~~~~~~~a~~~~~~a~~~~~~ 318 (428)
T 1ek9_A 239 QAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLES 318 (428)
T ss_dssp HHHGGGSCEEEEEEEEEEECCEEESTTSSSSCCSTTSCCCCEEEEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEEEEEeecCCCCccccccccccccccCCCCcceEEEEEEEEEeecCccchHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy2547 1724 KLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTE-LSKNIAELQKRIQSCINFIVDKSNNY 1802 (1807)
Q Consensus 1724 ~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~-le~el~~L~~el~~l~~~I~~~~~~Y 1802 (1807)
...+...++......+....++++.+.+.+....+.++..+..++.-...+.+ +..+..-++.++..+....+-....+
T Consensus 319 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~~ 398 (428)
T 1ek9_A 319 AHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL 398 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 388
>1qoy_A Hemolysin E; toxin, membrane pore former, cytolysin, pores; 2.0A {Escherichia coli} SCOP: h.4.4.1 PDB: 2wcd_A
Probab=67.59 E-value=1.7e+02 Score=33.32 Aligned_cols=223 Identities=12% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHhhHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1427 AKDYAETSKKLINEKESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDH 1506 (1807)
Q Consensus 1427 A~~~a~~l~~~i~e~~~~~eeL~~~~~~~~~~~~a~~~ae~a~~~l~~~~~~~~~l~~~~~~~~~~~~~a~~~A~~~~~~ 1506 (1807)
|.+..+.++..++.+...++..+.++...-......+.++.....+..-+-+++..+.++......+...-.++-...-.
T Consensus 21 ~~~~~e~vk~al~Sls~iv~kY~~elD~kvkf~~LQ~aId~ID~~MlgY~G~AK~~LD~lRslns~A~ltY~~cv~~VfE 100 (318)
T 1qoy_A 21 ADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYE 100 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHSCHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhcCCcHHHHhhHHHHHhhHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHH---HH--HHHHHHHHHHhhCCCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHH
Q psy2547 1507 AASVRNKTAAYVA---ST--SNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTI 1581 (1807)
Q Consensus 1507 a~~~~~~~e~~~~---~~--~~l~~~lk~~l~~~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~ 1581 (1807)
--.+.+..=..+. .. ..+...=++.+ +.-+++.|.. +......++.|.+-..+.... +..+
T Consensus 101 WCvsinsTl~~~ip~i~~~~~~lS~~dkdil---------W~iia~al~~--L~Ka~~SLe~L~~v~~~~~~L---f~~m 166 (318)
T 1qoy_A 101 WCGVATQLLAAYILLFDEYNEKKASAQKDIL---------IKVLDDGITK--LNEAQKSLLVSSQSFNNASGK---LLAL 166 (318)
T ss_dssp HHHHHHHHHHHHHHTTTTCCHHHHHHHHHHH---------HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH---HHHH
T ss_pred HHHHHHHHHHHHHHhhccccccCCHHHHHHH---------HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH---HHHH
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhhhHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1582 LTETAGDLAK-ANDLKRKANLTKAGADST------------------------KNTVQKIVDVLTEARTAQDMAEVAIQT 1636 (1807)
Q Consensus 1582 l~~~~~~l~~-a~~L~~~a~~a~~ea~~l------------------------~~~l~~l~~~L~~a~~~~~~a~~~l~~ 1636 (1807)
+.++..+... ..-..++..++++++..- ...+...+++++..+.=...+.++|++
T Consensus 167 l~dv~~DFg~~~GyYgk~~~ki~~~~~aga~~~iv~gpfga~i~~~~a~~f~e~~~i~s~k~~ikaI~~FF~~L~~kI~e 246 (318)
T 1qoy_A 167 DSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVVGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQ 246 (318)
T ss_dssp HHHHHHHHSTTSHHHHHHHHHHHHHHHHTTTTTEEECGGGCEEEHHHHTTSSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCcCCchHHHHHHHHHhhhhcchhhhhhccHHHHHhcccchhHHhhccccCHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1637 AKDDISAARKDLSQITNDLDDAQQKSN 1663 (1807)
Q Consensus 1637 a~~~i~~~~~~l~~ie~~l~~~e~~l~ 1663 (1807)
|++.++++...|......+..++.+.+
T Consensus 247 A~~~~D~v~~~L~~e~~~i~~~~~~~~ 273 (318)
T 1qoy_A 247 ANKDIDAAKLKLTTEIAAIGEIKTETE 273 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHhcccccccc
No 389
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=67.53 E-value=7.3 Score=46.26 Aligned_cols=85 Identities=9% Similarity=0.108 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1642 SAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQN---GRSAMDVENEEKNLEKEVALAQKQASGLRSRY 1718 (1807)
Q Consensus 1642 ~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~---~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l 1718 (1807)
.+++.++.+++.++..++.++..++.+++..+.+++..+.-+... +..+++++.++..++.+++.++.+++.++.++
T Consensus 65 ~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l 144 (341)
T 3fpp_A 65 EQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL 144 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHH
Q psy2547 1719 QETDNKLL 1726 (1807)
Q Consensus 1719 ~~~~~~l~ 1726 (1807)
+.++..+.
T Consensus 145 ~~a~~~l~ 152 (341)
T 3fpp_A 145 DTAKTNLD 152 (341)
T ss_dssp TTTTTTTT
T ss_pred HHHHHhhh
No 390
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=67.49 E-value=7.6 Score=46.63 Aligned_cols=84 Identities=10% Similarity=0.074 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1642 SAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQN---GRSAMDVENEEKNLEKEVALAQKQASGLRSRY 1718 (1807)
Q Consensus 1642 ~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~---~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l 1718 (1807)
..++.++.+++.++..++.++..++.+++..+.+++.++.-+.+. +..+++++.++..++.+++.++.+++.++.++
T Consensus 66 ~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l 145 (369)
T 4dk0_A 66 TTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEV 145 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHH
Q psy2547 1719 QETDNKL 1725 (1807)
Q Consensus 1719 ~~~~~~l 1725 (1807)
+.++..+
T Consensus 146 ~~a~~~l 152 (369)
T 4dk0_A 146 NTAETNL 152 (369)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
No 391
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=67.43 E-value=40 Score=33.91 Aligned_cols=93 Identities=10% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1629 MAEVAIQTAKDDISAARKDLSQITNDLD-----DAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKE 1703 (1807)
Q Consensus 1629 ~a~~~l~~a~~~i~~~~~~l~~ie~~l~-----~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~ 1703 (1807)
.++.++++.-+.++.+-.....+..... ++.....++...+..++..|++|++-+..++..-....-...++..+
T Consensus 31 ~Vk~EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~R 110 (130)
T 4dnd_A 31 VVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQER 110 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1704 VALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1704 a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
++-+.+++.+++.+++.+
T Consensus 111 ----r~fV~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 111 ----KVFVERMREAVQEMKDHM 128 (130)
T ss_dssp ----HHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHh
No 392
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=67.37 E-value=1.7e+02 Score=32.96 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHH
Q psy2547 1505 DHAASVRNKTAAYVASTSNITKQLDEFLNA---PGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTI 1581 (1807)
Q Consensus 1505 ~~a~~~~~~~e~~~~~~~~l~~~lk~~l~~---~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~ 1581 (1807)
+....+..+++........+.+.++.++.. .++....+..+...--....+..+.....|.+.+.+.-..+..-.
T Consensus 31 ~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p~~~~~L~~~m~~~~~~l~~~s-- 108 (256)
T 1zww_A 31 DDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDC-- 108 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------CCHHHHHHHHHHHHHHHHCSSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHhhCCCCC--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q psy2547 1582 LTETAGDLAKANDLKRKANLTKA--GADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQ-ITNDLDDA 1658 (1807)
Q Consensus 1582 l~~~~~~l~~a~~L~~~a~~a~~--ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~-ie~~l~~~ 1658 (1807)
..-.-+........++..++. ...--..-++-+..-++.--..+..+.+.++...-+.+..+.++.. ++.+++.+
T Consensus 109 --~~g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLdyD~~k~k~~k~~eeEle~A 186 (256)
T 1zww_A 109 --NFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYKKKRQGKIPDEELRQA 186 (256)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1659 QQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNK 1724 (1807)
Q Consensus 1659 e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~ 1724 (1807)
+.+.+.....+...-..+-+.+ ...+.....=+..+++-.+.-++.+++....+.+.+.....+
T Consensus 187 ~~~fe~~~e~~~~~m~~l~~~e--~e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~~~~~~ 250 (256)
T 1zww_A 187 LEKFDESKEIAESSMFNLLEMD--IEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQASSQ 250 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
No 393
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=67.35 E-value=1.1e+02 Score=30.88 Aligned_cols=125 Identities=13% Similarity=0.061 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1658 AQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVEN-----EEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1658 ~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~-----~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l 1732 (1807)
++.--..+..+.+.+-.++++|+..++.++..+..-.. +++.+...+..+..+++.+++-++..+-.-...=+.-
T Consensus 12 ~~~~k~kL~~~sd~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~ekP~WKKiWE~E 91 (141)
T 3okq_A 12 MEKSQTELGDLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDTEKPHWKKTWEAE 91 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1733 GLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIA 1782 (1807)
Q Consensus 1733 ~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~ 1782 (1807)
-+..-+-+++..-.+.|..++.+-+..+.+.=..++..-.+....-.+..
T Consensus 92 L~~VceEQqfl~~QedL~~DL~eDL~ka~etf~lVeq~~~eq~k~~~~~~ 141 (141)
T 3okq_A 92 LDKVCEEQQFLTLQEELILDLKEDLGKALETFDLIKLCCEEQEKNPSRSK 141 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
No 394
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=67.23 E-value=12 Score=34.22 Aligned_cols=53 Identities=9% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1670 KLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETD 1722 (1807)
Q Consensus 1670 ~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~ 1722 (1807)
.+++.+|.+|+.++.-....++++...+-.-..+++.++.++..|.++++.++
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 395
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=67.18 E-value=18 Score=44.18 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1640 DISAARKDLSQITNDLDDA-----QQKSNETNVKVKLLQERLKSIQAGFLQNGRSAM-DVENEEKNLEKEVALAQKQASG 1713 (1807)
Q Consensus 1640 ~i~~~~~~l~~ie~~l~~~-----e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~-~a~~~ae~a~~~a~~ae~~l~e 1713 (1807)
+++.++...+.+...+..- -.++..+..+..++..+++.++.+...+.+.+. ...++++.+..++..+++++++
T Consensus 3 d~~~~r~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~ 82 (421)
T 1ses_A 3 DLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKR 82 (421)
T ss_dssp CHHHHHHCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhCHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy2547 1714 LRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1714 l~~~l~~~~~~l~~~~~~l 1732 (1807)
+++++.++++++......+
T Consensus 83 ~~~~~~~~~~~~~~~~~~i 101 (421)
T 1ses_A 83 LEEALREKEARLEALLLQV 101 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhC
No 396
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=67.17 E-value=1.2 Score=45.29 Aligned_cols=77 Identities=23% Similarity=0.489 Sum_probs=0.0
Q ss_pred e-ecCCCCc----CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCCCCcccCCCC
Q psy2547 944 C-ECKEGYR----GTRCDGCLDN-YFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFF 1017 (1807)
Q Consensus 944 C-~C~~g~~----G~~Ce~C~~g-~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~ 1017 (1807)
| .|++|+. ...|..|.+| +|-+--.....|.+|. .|++..+.=..|.....-. |. |++|||
T Consensus 25 C~~CppG~~~~~~~t~C~pC~~g~ty~~~~n~~~~C~~C~-----------~C~~g~~~~~~Ct~t~dtv-C~-C~~G~y 91 (130)
T 1du3_A 25 EGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCT-----------RCDSGEVELSPCTTTRNTV-CQ-CEEGTF 91 (130)
T ss_dssp TTBBCTTEEECSSSSCEEECCTTTEECCSSBCCSSCEECC-----------CCCTTEEEEECCCSSSCCE-EE-ECTTCE
T ss_pred cCCCCCCceecCCCCcCccCCCcCEEeCCCCCCCcCcCCC-----------CCCcceeeeccCCCCCCCE-ec-CCCCeE
Q ss_pred CCccc-CCCCCC--cCCCC
Q psy2547 1018 GNALE-QNCTEC--TCNIL 1033 (1807)
Q Consensus 1018 G~~~~-~~C~~C--~C~~~ 1033 (1807)
-+... ..|.+| .|..+
T Consensus 92 ~~~~~~~~C~~C~t~C~~G 110 (130)
T 1du3_A 92 REEDSPEMCRKCRTGCPRG 110 (130)
T ss_dssp EETTEEEEEEC--------
T ss_pred ECCCCCCcCcCCcCcCCcC
No 397
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=67.17 E-value=45 Score=35.48 Aligned_cols=97 Identities=9% Similarity=0.077 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Q psy2547 1627 QDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNL------ 1700 (1807)
Q Consensus 1627 ~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a------ 1700 (1807)
++.--..++++...|..++..+.++......+..........-.+|+.-+.+++.....++.+++.++...+..
T Consensus 38 m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~ 117 (180)
T 1s94_A 38 MEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTDIKRTANKVRGKLKTIELNIEQEEHSNKS 117 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1701 -------EKEVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1701 -------~~~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
+.+...+..++.++..+|..++.
T Consensus 118 s~~~Rir~~q~~~L~~kf~~~m~~yq~~q~ 147 (180)
T 1s94_A 118 SADLRIRKTQYSTISRKFVEVMSDYNTTQI 147 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 398
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=67.12 E-value=38 Score=31.70 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1655 LDDAQQKSNETNVKVKLLQERLKSIQAGFLQN-----GRSAMDVENEEKNLEKEVALAQKQASGLRS 1716 (1807)
Q Consensus 1655 l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~-----~~~~~~a~~~ae~a~~~a~~ae~~l~el~~ 1716 (1807)
+++++..+...+.+|.....+|.+.+..++.+ +..+..-...+..++.++.++++.+.+...
T Consensus 7 i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~~~V~~lq~Ki~elkr~lAd~v~ 73 (96)
T 2ic9_A 7 LKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLIA 73 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 399
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=66.97 E-value=20 Score=44.29 Aligned_cols=99 Identities=8% Similarity=0.001 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Q psy2547 1634 IQTAKDDISAARKDLSQITN-DLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENE---EKNLEKEVALAQK 1709 (1807)
Q Consensus 1634 l~~a~~~i~~~~~~l~~ie~-~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~---ae~a~~~a~~ae~ 1709 (1807)
++-+.+..+.+++.+..-.. ....+-.++.++..+..++..+++.++.+...+.+.+..++.. ++.+..++..+++
T Consensus 4 ~~~~r~n~~~~~~~~~~R~~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~ 83 (455)
T 2dq0_A 4 IKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVK 83 (455)
T ss_dssp HHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1710 QASGLRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1710 ~l~el~~~l~~~~~~l~~~~~~l 1732 (1807)
++++++++++++++++......+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~i 106 (455)
T 2dq0_A 84 RIGELENEVEELKKKIDYYLWRL 106 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
No 400
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=66.85 E-value=35 Score=32.77 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q psy2547 1709 KQASGLRSRYQETDNKLLSKAESSGLK-R-ARGQMLLNKASQLSVNTTAKLKQLNETEAMF-----NSQESELTELSKNI 1781 (1807)
Q Consensus 1709 ~~l~el~~~l~~~~~~l~~~~~~l~~~-~-~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i-----~~~e~~le~le~el 1781 (1807)
..++..+++|..+...+..+...+... . .+.+++..+++....++++.+++++--...+ .....+|..+..+|
T Consensus 15 elFe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk~dL 94 (102)
T 2qyw_A 15 EHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKDL 94 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHH
Q psy2547 1782 AELQKRI 1788 (1807)
Q Consensus 1782 ~~L~~el 1788 (1807)
..|+.++
T Consensus 95 ~~lk~el 101 (102)
T 2qyw_A 95 AKLHREV 101 (102)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
No 401
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=66.49 E-value=2.4 Score=48.79 Aligned_cols=49 Identities=33% Similarity=0.926 Sum_probs=0.0
Q ss_pred CccccCCCcccCCCC-------------cCCCCccCCCCCCCccCCCCCCCCCCCccccCCceEeccCCc------cccC
Q psy2547 1097 GQCQCKSGFGGRQCD-------------QCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGI------GGVR 1157 (1807)
Q Consensus 1097 g~C~C~~g~~G~~C~-------------~C~~g~~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~------~G~~ 1157 (1807)
|.|.|.+||.|..|+ .|...--+. .|...| .|. -|+|.|.+++ .|.+
T Consensus 207 G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~--------~CSgrG----~C~--CG~C~C~~~~~~~~~~~G~~ 272 (280)
T 2p26_A 207 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSI--------ICSGLG----DCV--CGQCLCHTSDVPGKLIYGQY 272 (280)
T ss_dssp TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSC--------GGGGSE----EEE--TTEEEECCCSSTTCEEESTT
T ss_pred CceeCCCCCcCCcceecCCccccccccccCCCCCCCC--------ccCCCc----eEe--CCeeECcCCCCCCeeEeeEe
Q ss_pred CC
Q psy2547 1158 CD 1159 (1807)
Q Consensus 1158 C~ 1159 (1807)
|+
T Consensus 273 ~~ 274 (280)
T 2p26_A 273 CE 274 (280)
T ss_dssp SC
T ss_pred cc
No 402
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=66.32 E-value=1.4e+02 Score=31.67 Aligned_cols=151 Identities=7% Similarity=-0.012 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1642 SAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQN-----GRSAMDVENEEKNLEKEVALAQKQASGLRS 1716 (1807)
Q Consensus 1642 ~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~-----~~~~~~a~~~ae~a~~~a~~ae~~l~el~~ 1716 (1807)
..-..-+..+...+..++..-+.+...+..-...=++++..+.+. .+++......++.+..-+-.+...+..++.
T Consensus 15 ~Kk~ELi~~L~~kL~~L~~eqe~l~ee~~~N~~lG~~vea~V~~~c~P~E~eKy~~FigDLekVv~LLLsLs~RLaRven 94 (190)
T 3thf_A 15 QKMDELIKHLNQKIVSLKREQQTISEECSANDRLGQDLFAKLAEKVRPSEASKFRTHVDAVGNITSLLLSLSERLAQTES 94 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1717 RYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMF--NSQESELTELSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1717 ~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i--~~~e~~le~le~el~~L~~el~~l~~~ 1794 (1807)
.+... .+.+..+.+.+..+....+.|+.|++.+....+.+..+-..+ .+.-+.+.-+-..-..|..+.+++.+.
T Consensus 95 aL~~~----~~Er~sL~~K~~~L~~Q~EDAkeLKe~ldRRe~~V~~iL~~~L~~eql~DY~~fv~mKa~Ll~eqReLddk 170 (190)
T 3thf_A 95 SLETR----QQERGALESKRDLLYEQMEEAQRLKSDIERRGVSIAGLLAKNLSADMCADYDYFINMKAKLIADARDLAVR 170 (190)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHccC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q ss_pred HH
Q psy2547 1795 IV 1796 (1807)
Q Consensus 1795 I~ 1796 (1807)
|.
T Consensus 171 Ik 172 (190)
T 3thf_A 171 IK 172 (190)
T ss_dssp HH
T ss_pred HH
No 403
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=66.13 E-value=1.6e+02 Score=32.36 Aligned_cols=184 Identities=7% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q psy2547 1592 ANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQ-ITNDLDDAQQKSNETNVKVK 1670 (1807)
Q Consensus 1592 a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~-ie~~l~~~e~~l~~~e~~l~ 1670 (1807)
++.|..+++.+...-...+ ++-+.......+...+.+.+++.....-+..++..|.. ++...++-+..+..+..+|.
T Consensus 44 leEIqkKLeAAEERRks~E--a~~lk~laekrEhe~evlqKa~Een~~F~k~aeEkL~~KME~~kEnReA~laal~erLk 121 (240)
T 4f61_I 44 LEEIQKKLEAAEERRKYQE--AELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENREAHFAAMLERLQ 121 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy2547 1671 LLQERLKSIQAGFLQNGR-----SAMDVENEEKNLEKEVALAQKQ-ASGLRSRYQETDNKLLSKAESSGLKRARGQMLLN 1744 (1807)
Q Consensus 1671 ~l~~~le~lk~~l~~~~~-----~~~~a~~~ae~a~~~a~~ae~~-l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~ 1744 (1807)
+-...++.+...+..... ...+++..++.+..+-..-+.+ ++.|.++.+...+.+......-..-...++.-..
T Consensus 122 ek~~~aeeVRr~~~~~~~~~~k~~~eei~~KLeaAeErRk~qea~~Lk~LaekrEHe~eVlqka~e~n~~f~k~~eekl~ 201 (240)
T 4f61_I 122 EKDKHAEEVRQRAIEENNNWIKMAKEKLAQKMESNKENRKYQEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLA 201 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1745 KASQLSVNTTAKLKQLNETEAMFNSQESELTELSK 1779 (1807)
Q Consensus 1745 ~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~ 1779 (1807)
. .+....+.....+.++...+......++....
T Consensus 202 ~--KmE~~kEnRea~~~a~~ErL~ek~k~aeevr~ 234 (240)
T 4f61_I 202 Q--KMESNKENREAHFAAMLERLQEKDKHAEEVRK 234 (240)
T ss_dssp H--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
No 404
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=66.06 E-value=56 Score=30.66 Aligned_cols=88 Identities=8% Similarity=0.020 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1690 AMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAES-----SGLKRARGQMLLNKASQLSVNTTAKLKQLNETE 1764 (1807)
Q Consensus 1690 ~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~-----l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le 1764 (1807)
+..++..-+.+...+..+.....++...+..+...+..+... ...-...++++...++++...+....+.|....
T Consensus 3 M~~i~V~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a 82 (98)
T 3gwk_C 3 MSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVA 82 (98)
T ss_dssp HHHBCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHH
Q psy2547 1765 AMFNSQESELTEL 1777 (1807)
Q Consensus 1765 ~~i~~~e~~le~l 1777 (1807)
..++..++++...
T Consensus 83 ~~~~~~D~~~A~~ 95 (98)
T 3gwk_C 83 DIIEQTDADIASQ 95 (98)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
No 405
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=66.00 E-value=7.3 Score=46.03 Aligned_cols=66 Identities=15% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccccC---CCCcceeEEEeccceeEEEEEEEEEcC-----------CCCCcEEEEEecCCC
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSE---NGVENVTIQLDMEAEFHFTHLIIYFKT-----------FRPAAMLIERSHDFG 162 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~---~~~~~v~i~l~l~~~f~~~~~~~~f~s-----------~rP~~~~iers~d~g 162 (1807)
.|.+.++.+. +..+.|.+. ....+--|++||+....|+-|+++... ....+..|+-|.| |
T Consensus 189 ~~~p~~arL~-----~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~vt~Y~l~yS~d-g 262 (325)
T 2qqj_A 189 LWSPSAARLV-----SSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-G 262 (325)
T ss_dssp CCCGGGGBTT-----TCSSCBCCSSSSCCTTTCCEEEEEEEEEEEEEEEEECBCCC----CCCCCBCEEEEEEEEESS-S
T ss_pred ccCcchhhhc-----cCCCccccccccCCCccceeEeccCCceeEEEEEecCCCCCCCccccCcceeEEEEEEEEEeC-C
Q ss_pred CCccch
Q psy2547 163 KTWQVY 168 (1807)
Q Consensus 163 ~~w~~~ 168 (1807)
.+|++|
T Consensus 263 ~~W~~~ 268 (325)
T 2qqj_A 263 KDWEYI 268 (325)
T ss_dssp SSCEEC
T ss_pred CCeEEE
No 406
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=65.91 E-value=77 Score=28.73 Aligned_cols=69 Identities=14% Similarity=0.301 Sum_probs=0.0
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1648 LSQITNDL-DDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRS 1716 (1807)
Q Consensus 1648 l~~ie~~l-~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~ 1716 (1807)
+..++..+ ..+...+......|+.|...-++|+..-..+...+.+++.+-.++...++.++++.++|.+
T Consensus 5 lSAVeDKLRrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~ 74 (78)
T 3iv1_A 5 ISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSS 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 407
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=65.75 E-value=3.8 Score=55.69 Aligned_cols=108 Identities=20% Similarity=0.466 Sum_probs=0.0
Q ss_pred CcCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc-----CCCcc-cccCCCCCCCCCC-CcccCCCC---C
Q psy2547 950 YRGTRCDG-CLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCD-----TLTGK-CLQCRYDTEGDHC-QVCKAGFF---G 1018 (1807)
Q Consensus 950 ~~G~~Ce~-C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~-----~~tG~-C~~C~~~~~G~~C-~~C~~G~~---G 1018 (1807)
|.-.+|+. |.+..-...|...+.| |+. .|. |..-. |+.|.+-..+..| +.|++||| |
T Consensus 183 w~~~~cq~~C~~~C~~~~c~~~~~C----Ch~--------~C~ggC~gp~~~~~C~~C~~~~~~~~Cv~~Cp~~~y~~~~ 250 (897)
T 2dtg_E 183 WTHSHCQKVCPTICKSHGCTAEGLC----CHS--------ECLGNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQD 250 (897)
T ss_dssp SSSSCBCCCCCTTTGGGCBCSSSCB----CCT--------TCCSEESSSSCGGGEECCSSCBBTTBCCSSCCSSCCCCTT
T ss_pred CCCchhhccccccccCCcccCCCCc----cCh--------hhCcCCCCCCCCCceeECccCccCCcchhhcCCceeEecC
Q ss_pred Cccc--CCCCCCcCCCCCCCCCCCCCcCCCCccccCCCc-ccccccc-cCCCCcccCCCCCCCCCC
Q psy2547 1019 NALE--QNCTECTCNILGIDHSKGPCDRTTGQCPCLPNV-IGVSCDR-CLKNHWKIASGTGCEPCD 1080 (1807)
Q Consensus 1019 ~~~~--~~C~~C~C~~~g~~~~~~~C~~~tG~C~C~~g~-~G~~C~~-C~~g~~~~~~~~~C~~c~ 1080 (1807)
..|. ..|..|. ..|..-.+. .|.+-+ .+..|-. |++||+.......|++|.
T Consensus 251 ~~C~~~~~C~~~~----------~~c~~~~~~-~c~~~~~~~~~Cv~~CP~g~~~~~~~~~C~~C~ 305 (897)
T 2dtg_E 251 WRCVNFSFCQDLH----------HKCKNSRRQ-GCHQYVIHNNKCIPECPSGYTMNSSNLLCTPCL 305 (897)
T ss_dssp SBCCCHHHHHHHS----------SCCCSTTTT-SCCCCEEETTEEESSCCSSCEECSSSCBEECCC
T ss_pred cEEcChhHhhccC----------ccccCCCcc-cccceeeECCEEccCCCCCccccCCCCeeccCC
No 408
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=65.75 E-value=1.6 Score=37.62 Aligned_cols=34 Identities=26% Similarity=0.593 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCc------cCCCCccccCCCcccCCCCc-CCCCcc
Q psy2547 1080 DCDPIGSVDVTEC------NEYTGQCQCKSGFGGRQCDQ-CQTNFW 1118 (1807)
Q Consensus 1080 ~C~~~gs~~~~~C------~~~tg~C~C~~g~~G~~C~~-C~~g~~ 1118 (1807)
+|.++| +| ......|.|++||+|.+|+. ...+.|
T Consensus 15 pC~NGG-----tC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~~y 55 (58)
T 3ltf_D 15 YCLNDA-----HCFAVKIADLPVYSCECAIGFMGQRCEYKEIDNTY 55 (58)
T ss_dssp TSCSSC-----EEEEEEETTEEEEEEEECTTEESSSSCEECCCCCS
T ss_pred cCCCCC-----EEeCCccCCCCCEEeECCCCCccCCCcccCCCCcC
No 409
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=65.74 E-value=47 Score=31.58 Aligned_cols=83 Identities=11% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1711 ASGLRSRYQETDNKLLSKAESSG--------LKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIA 1782 (1807)
Q Consensus 1711 l~el~~~l~~~~~~l~~~~~~l~--------~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~ 1782 (1807)
++..+.+|..+...+..+...+. ....+++...+++..+..+++-..+.+..-...-.....+|..+..+|.
T Consensus 3 F~~YE~df~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~~p~~~R~~~~~klr~Yk~dl~ 82 (97)
T 3onj_A 3 LISYESDFKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWKKTIQ 82 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q ss_pred H-HHHHHHHHHH
Q psy2547 1783 E-LQKRIQSCIN 1793 (1807)
Q Consensus 1783 ~-L~~el~~l~~ 1793 (1807)
. |+.+++.+.+
T Consensus 83 ~~lk~~lk~l~d 94 (97)
T 3onj_A 83 SDIKRPLQSLVD 94 (97)
T ss_dssp HHTHHHHHHHHH
T ss_pred HHHHHHHHHhhh
No 410
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=65.71 E-value=1.7e+02 Score=32.51 Aligned_cols=177 Identities=7% Similarity=0.001 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHH
Q psy2547 1590 AKANDLKRKANLTKAGADSTKNTVQKIVD------------------------------------VLTEARTAQDMAEVA 1633 (1807)
Q Consensus 1590 ~~a~~L~~~a~~a~~ea~~l~~~l~~l~~------------------------------------~L~~a~~~~~~a~~~ 1633 (1807)
.+-..|.++++.++.-...+.+......+ .+.++-..+..-. .
T Consensus 15 ~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m~~~~~~l~~ds-~ 93 (240)
T 2z0v_A 15 DEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDS-T 93 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHHHHHHHHHCTTC-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHhhcCCCc-h
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1634 IQTAKDDISAARKDLSQITNDLDDAQQK--SNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQA 1711 (1807)
Q Consensus 1634 l~~a~~~i~~~~~~l~~ie~~l~~~e~~--l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l 1711 (1807)
+..+-.....+.++|..+...+...-.+ +..+..-++.--..+...++++...+..++.++.+... .+++++
T Consensus 94 ~g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~k~~k------~~eeEl 167 (240)
T 2z0v_A 94 FGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGK------IPDEEV 167 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTTS------SCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------ccHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1712 SGLRSRYQETDNKLLSKAESSGLK-RARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESE 1773 (1807)
Q Consensus 1712 ~el~~~l~~~~~~l~~~~~~l~~~-~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~ 1773 (1807)
++++++|.+..+.+......+.+. ...+..+..-++.-..=-..-.+.|..+...+......
T Consensus 168 ~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~~ 230 (240)
T 2z0v_A 168 RQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRISA 230 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 411
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=65.09 E-value=2.2 Score=54.19 Aligned_cols=37 Identities=27% Similarity=0.789 Sum_probs=0.0
Q ss_pred CCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecC-CCCcCCCCC
Q psy2547 911 DIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECK-EGYRGTRCD 956 (1807)
Q Consensus 911 ~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~-~g~~G~~Ce 956 (1807)
.+.|.+-||.++ ++|..... +.+.|.|+ +||+|.+|+
T Consensus 1 vd~C~s~PC~ng--------G~C~~~~~-~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNR--------GECMSTGF-DQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTT--------CEEEEEET-TEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCC--------CEeeCCCC-CCeEEecCCCCccCCCCC
No 412
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=65.04 E-value=6.7 Score=48.65 Aligned_cols=67 Identities=21% Similarity=0.234 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccc---cCCCCcceeEEEeccceeEEEEEEEEEcC-----CCCCcEEEEEecCCCCCccch
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQ---SENGVENVTIQLDMEAEFHFTHLIIYFKT-----FRPAAMLIERSHDFGKTWQVY 168 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwq---s~~~~~~v~i~l~l~~~f~~~~~~~~f~s-----~rP~~~~iers~d~g~~w~~~ 168 (1807)
.|++.++.+. +..+.|. +.....+--|++||++...|+.|+++... ..-.+..|+=|.| |.+|++|
T Consensus 320 ~~~p~~arl~-----~~~~~W~~~~~~~~~~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~Y~i~~S~d-g~~W~~~ 393 (450)
T 2qqm_A 320 NWMPENIRLV-----TSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNN-GSDWKMI 393 (450)
T ss_dssp TCCGGGGBTT-----TCSSCEEECCCSSCCCSCCEEEEEEEEEEEEEEEEECCSCTTTCCCEEEEEEEEESS-SSSCEEC
T ss_pred ccCchhhhcc-----ccCCcccccccccCCcCceEEEeCCCcEEEEEEEecCccCCCCcEEEEEEEEEEECC-CCcEEEE
Q ss_pred h
Q psy2547 169 R 169 (1807)
Q Consensus 169 q 169 (1807)
.
T Consensus 394 ~ 394 (450)
T 2qqm_A 394 M 394 (450)
T ss_dssp B
T ss_pred E
No 413
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=64.99 E-value=48 Score=35.25 Aligned_cols=107 Identities=7% Similarity=0.076 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Q psy2547 1697 EKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ------ 1770 (1807)
Q Consensus 1697 ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~------ 1770 (1807)
+..+..+++.++..+..+...+.++................--.+|..-+.............|+.|+...+..
T Consensus 38 m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~ 117 (180)
T 1s94_A 38 MEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTDIKRTANKVRGKLKTIELNIEQEEHSNKS 117 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q psy2547 1771 ESELTELSKNIAELQKRIQSCINFIVDKSNNYK 1803 (1807)
Q Consensus 1771 e~~le~le~el~~L~~el~~l~~~I~~~~~~Y~ 1803 (1807)
.....-.......|.+++..+..+.+.....|+
T Consensus 118 s~~~Rir~~q~~~L~~kf~~~m~~yq~~q~~y~ 150 (180)
T 1s94_A 118 SADLRIRKTQYSTISRKFVEVMSDYNTTQIDYR 150 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 414
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=64.61 E-value=79 Score=29.46 Aligned_cols=88 Identities=11% Similarity=0.037 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1690 AMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAES-----SGLKRARGQMLLNKASQLSVNTTAKLKQLNETE 1764 (1807)
Q Consensus 1690 ~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~-----l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le 1764 (1807)
...++...+.+...+..+.....+++..+..+...+..+... ...-...+.+....++++...+....+.|....
T Consensus 4 ~~~i~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a 83 (99)
T 3zbh_A 4 AGVIRLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSA 83 (99)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHH
Q psy2547 1765 AMFNSQESELTEL 1777 (1807)
Q Consensus 1765 ~~i~~~e~~le~l 1777 (1807)
..++..++++...
T Consensus 84 ~~~~~~d~~~a~~ 96 (99)
T 3zbh_A 84 TILEDTDQQIASQ 96 (99)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
No 415
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=64.36 E-value=15 Score=45.34 Aligned_cols=93 Identities=16% Similarity=0.060 Sum_probs=0.0
Q ss_pred HHHHHHH----HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Q psy2547 1640 DISAARK----DLSQITNDLDD------AQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVEN---EEKNLEKEVAL 1706 (1807)
Q Consensus 1640 ~i~~~~~----~l~~ie~~l~~------~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~---~ae~a~~~a~~ 1706 (1807)
+|+-++. ..+.+.+.+.. .-.++..+..+..++..++++++.+...+++.+..++. +++.+..++.+
T Consensus 3 di~~ir~~~~~n~~~v~~~~~~R~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~ 82 (485)
T 3qne_A 3 DINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEK 82 (485)
T ss_dssp CGGGGCGGGTCCHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred ChHHHhccCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1707 AQKQASGLRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1707 ae~~l~el~~~l~~~~~~l~~~~~~l 1732 (1807)
++++++++++++.++++++.+....+
T Consensus 83 l~~~i~~le~~~~~~~~~~~~~l~~i 108 (485)
T 3qne_A 83 LSNEKKEIIEKEAEADKNLRSKINQV 108 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
No 416
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=64.01 E-value=76 Score=34.14 Aligned_cols=141 Identities=9% Similarity=0.020 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy2547 1655 LDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGL 1734 (1807)
Q Consensus 1655 l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~ 1734 (1807)
..+++.-+++-...|+.+...+..++......... ....+.+.....+++..+..+.+...+++.++.....+...+.+
T Consensus 40 ~~eL~~LL~~~~dlL~~~v~~l~~~q~~~~~~e~l-~s~ae~ll~l~~~Le~~r~~l~~~l~~~~~L~~~~~~k~q~~~~ 118 (192)
T 2p22_C 40 SKEIIDLIQTHRHQLELYVTKFNPLTDFAGKIHAF-RDQFKQLEENFEDLHEQKDKVQALLENARILESKYVASWQDYHS 118 (192)
T ss_dssp THHHHHHHHHCHHHHHHHGGGGSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHHHHHhchhHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1735 KRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ--ESELTELSKNIAELQKRIQSCINFIV 1796 (1807)
Q Consensus 1735 ~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~--e~~le~le~el~~L~~el~~l~~~I~ 1796 (1807)
....--....-...|...+.+...+-.+++.++... +..+++...+..+..+.+-.-+..+.
T Consensus 119 ~ls~~~sp~~L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~dv~~Fl~~y~~~R~~yH~RreK~~ 182 (192)
T 2p22_C 119 EFSKKYGDIALKKKLEQNTKKLDEESSQLETTTRSIDSADDLDQFIKNYLDIRTQYHLRREKLA 182 (192)
T ss_dssp HHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
No 417
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=63.80 E-value=3.6 Score=43.90 Aligned_cols=35 Identities=31% Similarity=0.782 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCc
Q psy2547 1076 CEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQ 1112 (1807)
Q Consensus 1076 C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~ 1112 (1807)
|..-.|.+.-+.++ .|.. .++|.|++||+|..|+.
T Consensus 146 C~~~~C~~~C~ngG-~Cv~-P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 146 CQQAECPGGCRNGG-FCNE-RRICECPDGFHGPHCEG 180 (188)
T ss_dssp ECCCCCTTCCCTTC-EECT-TSCEECCTTCBTTTTCB
T ss_pred ccCCccCCCCCCCC-EeCC-CCcccCcCCCCCCCCcC
No 418
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=63.76 E-value=34 Score=29.25 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1658 AQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQAS 1712 (1807)
Q Consensus 1658 ~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~ 1712 (1807)
+...+..++..+.++..++...+..+..+...+.++...++.+...+..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~ 57 (60)
T 3htk_A 3 FANTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNE 57 (60)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 419
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=63.72 E-value=1.8e+02 Score=32.22 Aligned_cols=189 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHH----------------------HHHHHHHHHHHHHHH
Q psy2547 1605 GADSTKNTVQKIVDVLTEARTAQDMAEVAIQTA-------KDD----------------------ISAARKDLSQITNDL 1655 (1807)
Q Consensus 1605 ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a-------~~~----------------------i~~~~~~l~~ie~~l 1655 (1807)
+..++..+...+++.++..+.....+.+..+.. ... ...+-..+.+.-..+
T Consensus 9 ekTel~~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m~~~~~~l 88 (240)
T 2z0v_A 9 EGTKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKEL 88 (240)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHhhc
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHh
Q psy2547 1656 DDAQQKSNETNVKVKLLQERLKSIQAGFLQN--GRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLL-SKAESS 1732 (1807)
Q Consensus 1656 ~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~--~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~-~~~~~l 1732 (1807)
.. ...+..+.....+...+|...+..+... +.-++.+..-++.--..+..++++++...-.|+..+.++. ...+++
T Consensus 89 ~~-ds~~g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~k~~k~~eeEl 167 (240)
T 2z0v_A 89 GE-DSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGKIPDEEV 167 (240)
T ss_dssp CT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTTSSCHHHH
T ss_pred CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1733 GLKRARGQMLLNKASQLSVNTTAK-LKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINF 1794 (1807)
Q Consensus 1733 ~~~~~r~~~l~~~a~~l~~~~~~~-~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~ 1794 (1807)
..+..++.+..+.+......+.+. ...+..|..-++....=-.+-.+.+.+|...+....+.
T Consensus 168 ~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~~ 230 (240)
T 2z0v_A 168 RQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRISA 230 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 420
>1yc9_A VCEC, multidrug resistance protein; outer membrane protein, multidrug resistanc membrane protein; HET: BOG; 1.80A {Vibrio cholerae}
Probab=63.63 E-value=2.5e+02 Score=33.75 Aligned_cols=255 Identities=11% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHh
Q psy2547 1467 TSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNIS 1546 (1807)
Q Consensus 1467 ~a~~~l~~~~~~~~~l~~~~~~~~~~~~~a~~~A~~~~~~a~~~~~~~e~~~~~~~~l~~~lk~~l~~~~~~~~~i~~la 1546 (1807)
.....++..+...+....+...++.++......+--....+.......+.....+++..+.++.....-.....++....
T Consensus 117 ~~~~~~~~a~~~~~~a~~~~~~~~~~l~~~v~~ay~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~d~~~a~ 196 (442)
T 1yc9_A 117 KNRAAVVAATSELAAAEAESVAARLMISTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAK 196 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHH
Q ss_pred HHh--hhhccCCCHHHHHHHHHHHHHHHHhhhhHHHHH-----------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q psy2547 1547 GLA--VNKNIQSNPEQIRERANEINNVIKSLTDIDTIL-----------TETAGDLAKANDLKRKANLTKAGADSTKNTV 1613 (1807)
Q Consensus 1547 ~~v--l~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~l-----------~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l 1613 (1807)
..+ ....+.....++......|..++..-.+..-.+ .-.......+-.-..++..++.++...+..+
T Consensus 197 ~~~~~a~~~l~~a~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~al~~~p~l~~a~~~~~~a~~~~ 276 (442)
T 1yc9_A 197 AVAASVEAELLGIQESIQLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWRAEAAAQQV 276 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCCCCCCCCCCCC-------CGGGTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccccccccCCCCCCCcHHHHHhCchHHHHHHHHHHHHHHH
Q ss_pred HHHH---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1614 QKIV---------------------------------------------DVLTEARTAQDMAEVAIQTAKDDISAARKDL 1648 (1807)
Q Consensus 1614 ~~l~---------------------------------------------~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l 1648 (1807)
...+ ......+.+....+....+.+.....+..++
T Consensus 277 ~~a~~~~~P~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~plf~gg~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~v 356 (442)
T 1yc9_A 277 GIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLEGQLTSAEARYQEAVAQYNGTLVQALHEI 356 (442)
T ss_dssp HHHHHTTSCEEEEEEEEEEEEESGGGTTSTTCEEEEEEEEEECCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhCCceEEEeeecccccchHhhcCCcchhhhhhhheeeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1649 SQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQN---GRSAMDVENEEKNLEKEVALAQKQASGLRSRYQET 1721 (1807)
Q Consensus 1649 ~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~---~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~ 1721 (1807)
...-..+..+..++..++..+...++.++..+..+..- ...+.+++.++.+++.....++..+.....+|..+
T Consensus 357 ~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~s~~dll~a~~~l~~a~~~~~~a~~~~~~a~~~L~~~ 432 (442)
T 1yc9_A 357 ADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHA 432 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 421
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=63.60 E-value=1.8e+02 Score=32.01 Aligned_cols=181 Identities=8% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1613 VQKIVDVLTEARTAQ-----DMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKS-NETNVKVKLLQERLKSIQAGFLQN 1686 (1807)
Q Consensus 1613 l~~l~~~L~~a~~~~-----~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l-~~~e~~l~~l~~~le~lk~~l~~~ 1686 (1807)
+++|+..|..|+... +.++.-....+..-..+++.+....+-...++.+| ..++.--..-+..|..+..++.+-
T Consensus 44 leEIqkKLeAAEERRks~Ea~~lk~laekrEhe~evlqKa~Een~~F~k~aeEkL~~KME~~kEnReA~laal~erLkek 123 (240)
T 4f61_I 44 LEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENREAHFAAMLERLQEK 123 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1687 GRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAM 1766 (1807)
Q Consensus 1687 ~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~ 1766 (1807)
...+..+...+..-.... .+..++++..+|+..+.+-......+-........-..++ +...++....-.+..+.+
T Consensus 124 ~~~aeeVRr~~~~~~~~~--~k~~~eei~~KLeaAeErRk~qea~~Lk~LaekrEHe~eV--lqka~e~n~~f~k~~eek 199 (240)
T 4f61_I 124 DKHAEEVRQRAIEENNNW--IKMAKEKLAQKMESNKENRKYQEAELLKHLAEKREHEREV--IQRAIEENNNWIKMAKEK 199 (240)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTGGGTHHHHHHHHHHHHHHHH--TTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q psy2547 1767 FNSQESELTE-LSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1767 i~~~e~~le~-le~el~~L~~el~~l~~~I~~ 1797 (1807)
+........+ -+..+..+..++......+..
T Consensus 200 l~~KmE~~kEnRea~~~a~~ErL~ek~k~aee 231 (240)
T 4f61_I 200 LAQKMESNKENREAHFAAMLERLQEKDKHAEE 231 (240)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
No 422
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=63.54 E-value=47 Score=31.60 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1735 KRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNS---------------------QESELTELSKNIAELQKRIQSCIN 1793 (1807)
Q Consensus 1735 ~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~---------------------~e~~le~le~el~~L~~el~~l~~ 1793 (1807)
...++..+..+++.|..+-+...++++.|+.++.. .-...++...++++|+++++.++.
T Consensus 10 ~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~ 89 (100)
T 1go4_E 10 SREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRG 89 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHh
Q psy2547 1794 FIVD 1797 (1807)
Q Consensus 1794 ~I~~ 1797 (1807)
.+..
T Consensus 90 ~v~~ 93 (100)
T 1go4_E 90 LLRA 93 (100)
T ss_dssp HHTT
T ss_pred HHHH
No 423
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=63.45 E-value=34 Score=31.95 Aligned_cols=63 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1657 DAQQKSNETNVKVKLLQERLKSIQAGFL------QNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQ 1719 (1807)
Q Consensus 1657 ~~e~~l~~~e~~l~~l~~~le~lk~~l~------~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~ 1719 (1807)
..+++|..+..+|..++.++..|+..+. .....+..+..++..++..++.+...=.+|.+..+
T Consensus 19 keqrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~~~~ 87 (89)
T 2lw1_A 19 KLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEALKN 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHc
No 424
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=63.36 E-value=10 Score=45.56 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1562 RERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDI 1641 (1807)
Q Consensus 1562 ~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i 1641 (1807)
.++..++..+...|..++..+..++..+..++.-.++.+.+..+-..-+.+++..+.++..++..++.++.+++.++.++
T Consensus 66 ~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l 145 (369)
T 4dk0_A 66 TTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEV 145 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHH
Q psy2547 1642 SAARKDL 1648 (1807)
Q Consensus 1642 ~~~~~~l 1648 (1807)
+.++..+
T Consensus 146 ~~a~~~l 152 (369)
T 4dk0_A 146 NTAETNL 152 (369)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
No 425
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=63.07 E-value=49 Score=28.88 Aligned_cols=58 Identities=12% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1740 QMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1740 ~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
..+...+..|.+++..+..+|..|++.+.-..+..+.+.++|-.+.-+-.-+.+.++.
T Consensus 14 ~~~~~~l~~Lr~eL~~Ke~eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~ 71 (75)
T 3a7o_A 14 DALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSD 71 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHH
No 426
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=62.88 E-value=1.1e+02 Score=29.50 Aligned_cols=82 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH----------------HHH
Q psy2547 1674 ERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGL----------------KRA 1737 (1807)
Q Consensus 1674 ~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~----------------~~~ 1737 (1807)
..+..+++.+.+.+..+.++..++.+++..++.++++.+-.-.+|+.++-..++..+.... ...
T Consensus 4 ~s~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~~~~e~~~~~~~~~~~~~~~~~~~ 83 (106)
T 4e61_A 4 GSLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLINEGVYKFNDETITGHGNGNGG 83 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--------------C
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhcccccccch
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy2547 1738 RGQMLLNKASQLSVNTTA 1755 (1807)
Q Consensus 1738 r~~~l~~~a~~l~~~~~~ 1755 (1807)
+...+.+++.+..-.+++
T Consensus 84 ~~~~~~~kIq~ILYaTee 101 (106)
T 4e61_A 84 ALLRFVKKVESILYATAE 101 (106)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccc
No 427
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=62.82 E-value=15 Score=37.15 Aligned_cols=79 Identities=20% Similarity=0.239 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1719 QETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1719 ~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
......+.+....+-....+++.|.+.+=.+...-+++.++|++|+++++..++++.+..++-+.+-++++.+...|..
T Consensus 53 ~~f~~~~~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i~~ 131 (132)
T 1ykh_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDFVD 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 428
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=62.78 E-value=2.7 Score=53.37 Aligned_cols=37 Identities=30% Similarity=0.742 Sum_probs=0.0
Q ss_pred CCCCCcCCCCCCCCCCCCccCCcccc-CCCCCceeeecC-CCCcCCCCC
Q psy2547 910 IDIPCRPCPCPGTVESGLSYADTCQL-DPRSQDVICECK-EGYRGTRCD 956 (1807)
Q Consensus 910 ~~~~C~~c~C~~~~~~~~~~~~~C~~-~~~~~~~~C~C~-~g~~G~~Ce 956 (1807)
..+.|.+-||.++ ++|.. ... .+.|.|+ +||+|.+||
T Consensus 1 ~~d~C~~~PC~ng--------G~C~~~~~~--~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 1 PVNPCCYYPCQHQ--------GICVRFGLD--RYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCCGGGGCCCCTT--------CEEEEETTT--EEEEECTTSSEETTTTC
T ss_pred CCCcCCCCCCCCC--------CCcCCCCCC--ceEeeCCCCCcCCCCCC
No 429
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=62.70 E-value=16 Score=38.67 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=0.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy2547 1729 AESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKSNN 1801 (1807)
Q Consensus 1729 ~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~~~~ 1801 (1807)
.++..+.++-.++...+...+.+++..+..+|++|-..=+-.+.+++++.++|.+|..++...+-+.+.+...
T Consensus 70 ~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k~~~em~K 142 (175)
T 3lay_A 70 TEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVKRDVAMAQ 142 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 430
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=62.52 E-value=2.6e+02 Score=33.50 Aligned_cols=187 Identities=6% Similarity=0.023 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHH
Q psy2547 1606 ADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDD-ISAARKDLSQITNDLDDAQQ-----------KSNETNVKVKLLQ 1673 (1807)
Q Consensus 1606 a~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~-i~~~~~~l~~ie~~l~~~e~-----------~l~~~e~~l~~l~ 1673 (1807)
..++...++..+.-+......+..+......+.+. .....+++..+-..+..+-. .|..+...+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~r~~~~~~~e~~~l~~~l~~l~~~~~~~~~~~~~~Ls~aL~~l~~~~ 262 (386)
T 4akv_A 183 LQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTY 262 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSSGGGSCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1674 ERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNT 1753 (1807)
Q Consensus 1674 ~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~ 1753 (1807)
..+.++..... +.....+.+.+.....-+..++..+..-...+...++. +....+-.....+++++..+.+.+...+
T Consensus 263 e~i~~l~~~Qa--~~d~~~L~E~L~~Y~~ll~s~Kdll~~R~~aL~k~~ea-~kl~~~~K~~~~~~~e~~~r~e~IS~~~ 339 (386)
T 4akv_A 263 EAIGEMFAEQP--KNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKES-QRMSDEGRMVQDEADGIRRRCRVVGFAL 339 (386)
T ss_dssp HHHHHHHHHGG--GTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCccHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q psy2547 1754 TAKLKQLNETEAMFNSQESELTE-LSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1754 ~~~~~~l~~Le~~i~~~e~~le~-le~el~~L~~el~~l~~~I~~ 1797 (1807)
.+.+...+ .+++.+....|.+ ++.+|.--++.++.++..+.+
T Consensus 340 ~~El~rF~--~~Rv~Dfk~~l~eyle~qi~~~~~~~~~le~~l~~ 382 (386)
T 4akv_A 340 QAEMNHFH--QRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRM 382 (386)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 431
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=62.15 E-value=66 Score=29.16 Aligned_cols=66 Identities=5% Similarity=0.011 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1719 QETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAEL 1784 (1807)
Q Consensus 1719 ~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L 1784 (1807)
+.+..++.+...+...-..-++..+++++.=..+++.++.+|+.-...++.+..-+....++|...
T Consensus 10 DKLRrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~ 75 (78)
T 3iv1_A 10 DKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSA 75 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 432
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=62.11 E-value=34 Score=31.95 Aligned_cols=63 Identities=11% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1650 QITNDLDDAQQKSNETNVKVKLLQERLKSIQ------AGFLQNGRSAMDVENEEKNLEKEVALAQKQAS 1712 (1807)
Q Consensus 1650 ~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk------~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~ 1712 (1807)
..+.+++.++.+|..++.++..|+.+|.+-. .++..+...+..++.+++.+..+-.+|+...+
T Consensus 19 keqrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~~~~ 87 (89)
T 2lw1_A 19 KLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEALKN 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHc
No 433
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=61.98 E-value=50 Score=31.03 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
.++..++.++++.+..+.++-+++-+-.++++.+.++.+.++......+..-.+++.+.
T Consensus 5 d~l~~vq~ev~evk~iM~~NI~kvL~RgekL~~L~~kt~~L~~~s~~F~~~A~~l~rkm 63 (91)
T 3hd7_A 5 RRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKY 63 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 434
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=61.96 E-value=79 Score=30.35 Aligned_cols=76 Identities=13% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHH
Q psy2547 1717 RYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTE----------------LSKN 1780 (1807)
Q Consensus 1717 ~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~----------------le~e 1780 (1807)
.+..+.+.+.+...++.++..++..++..++.+.++-+.=..+|+.++--.+.....+++ ...+
T Consensus 5 s~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~~~~e~~~~~~~~~~~~~~~~~~~~ 84 (106)
T 4e61_A 5 SLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLINEGVYKFNDETITGHGNGNGGA 84 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--------------CH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchh
Q ss_pred HHHHHHHHHHHH
Q psy2547 1781 IAELQKRIQSCI 1792 (1807)
Q Consensus 1781 l~~L~~el~~l~ 1792 (1807)
+..+-++|..++
T Consensus 85 ~~~~~~kIq~IL 96 (106)
T 4e61_A 85 LLRFVKKVESIL 96 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
No 435
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=61.91 E-value=5.3 Score=54.30 Aligned_cols=123 Identities=23% Similarity=0.629 Sum_probs=0.0
Q ss_pred CCCccCC-----------CCCCCCCCCcccCCCCcccCCCCcccCCCC-CCCCCCcCCCCCC-CcCCCCCCCCCCCCccc
Q psy2547 768 HGANECD-----------CDPTGSTSKYCDQLGGNCVCKPNVVGRRCD-RCAPGTYGFGPEG-CKACDCNHVGALDNICD 834 (1807)
Q Consensus 768 ~g~~~c~-----------C~~~gs~~~~c~~~~g~C~C~~~~~G~~C~-~C~~g~~~~~~~~-C~~C~C~~~g~~~~~C~ 834 (1807)
.+...|. |-....-...|.+.-+.-.|... |.-|+ .|+.|.+|.++.. |..
T Consensus 164 ~~~~~C~~~~~~~~~~~~Cw~~~~cq~~C~~~C~~~~c~~~--~~CCh~~C~ggC~gp~~~~~C~~-------------- 227 (897)
T 2dtg_E 164 KGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAE--GLCCHSECLGNCSQPDDPTKCVA-------------- 227 (897)
T ss_dssp CSSCCSCEECGGGCCEECBSSSSCBCCCCCTTTGGGCBCSS--SCBCCTTCCSEESSSSCGGGEEC--------------
T ss_pred cccccCcccccCCCccCCCCCCchhhccccccccCCcccCC--CCccChhhCcCCCCCCCCCceeE--------------
Q ss_pred CCCCcccCCCCccCCCCCC-CCCCCCCCCC--CccC-CCCCCCCCCCCCCCCccCCCCCc-cCCCCC-cCCCCcccCCCC
Q psy2547 835 VVSGQCKCRAQTYGRECDQ-CSPGYWNYPT--CQRC-ICNGHADLCDSKTGTCISCRNST-DGENCE-RCINGYYGDPRL 908 (1807)
Q Consensus 835 ~~~g~C~C~~g~~G~~C~~-C~~g~~~~~~--C~~C-~C~~~~~~Cd~~tg~C~~C~~~~-~G~~Ce-~C~~G~~G~~~~ 908 (1807)
|+.-+.+..|-. |++|||.+.. |... .|......|....+ ..|.+.. .+..|- .|++||+.+.
T Consensus 228 -------C~~~~~~~~Cv~~Cp~~~y~~~~~~C~~~~~C~~~~~~c~~~~~--~~c~~~~~~~~~Cv~~CP~g~~~~~-- 296 (897)
T 2dtg_E 228 -------CRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRR--QGCHQYVIHNNKCIPECPSGYTMNS-- 296 (897)
T ss_dssp -------CSSCBBTTBCCSSCCSSCCCCTTSBCCCHHHHHHHSSCCCSTTT--TSCCCCEEETTEEESSCCSSCEECS--
T ss_pred -------CccCccCCcchhhcCCceeEecCcEEcChhHhhccCccccCCCc--ccccceeeECCEEccCCCCCccccC--
Q ss_pred CCCCCCcCCC
Q psy2547 909 GIDIPCRPCP 918 (1807)
Q Consensus 909 ~~~~~C~~c~ 918 (1807)
....|.+|.
T Consensus 297 -~~~~C~~C~ 305 (897)
T 2dtg_E 297 -SNLLCTPCL 305 (897)
T ss_dssp -SSCBEECCC
T ss_pred -CCCeeccCC
No 436
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=61.90 E-value=37 Score=41.95 Aligned_cols=86 Identities=10% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1594 DLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARK---DLSQITNDLDDAQQKSNETNVKVK 1670 (1807)
Q Consensus 1594 ~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~---~l~~ie~~l~~~e~~l~~~e~~l~ 1670 (1807)
++.++....+.....+.+++-++.++..+++..++.++.+.+.+.++|..+++ +.+++..+...+..++..++.++.
T Consensus 16 ~~v~~~~~~R~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~ 95 (485)
T 3qne_A 16 EIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEA 95 (485)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHH
Q psy2547 1671 LLQERLKSI 1679 (1807)
Q Consensus 1671 ~l~~~le~l 1679 (1807)
++++++..+
T Consensus 96 ~~~~~~~~~ 104 (485)
T 3qne_A 96 EADKNLRSK 104 (485)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 437
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=61.86 E-value=44 Score=35.12 Aligned_cols=127 Identities=5% Similarity=0.014 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy2547 1605 GADSTKNTVQKIVDVLTEA-RTAQDMAEVAIQTAKDDISA-ARKDLSQITNDLDDAQQKSNETNVKVKL-LQERLKSIQA 1681 (1807)
Q Consensus 1605 ea~~l~~~l~~l~~~L~~a-~~~~~~a~~~l~~a~~~i~~-~~~~l~~ie~~l~~~e~~l~~~e~~l~~-l~~~le~lk~ 1681 (1807)
..+.+.+.+-.--.++... +.+++.++ -.++..+++. +...++.+...++.++.+|.-+...+.. +...++.++.
T Consensus 25 ~le~v~~~~w~Y~~q~~~~a~~~v~ql~--~sel~qel~~~l~~~ld~l~~~~~~l~~~L~P~t~el~~~l~~~~e~Lr~ 102 (165)
T 1gs9_A 25 RWELALGRFWDYLRWVQTLSEQVQEELL--SSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQA 102 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHH--SSHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHH----HHHHHHHHHHHHH-HHHHHHHHHHHHHhH
Q psy2547 1682 GFLQNGRSAM-DVENEEKNLEKEVA----LAQKQASGLRSRY-QETDNKLLSKAESSG 1733 (1807)
Q Consensus 1682 ~l~~~~~~~~-~a~~~ae~a~~~a~----~ae~~l~el~~~l-~~~~~~l~~~~~~l~ 1733 (1807)
++...-+.+. .+..-+++++.++. ++++++..+.++| +.+...++++...+.
T Consensus 103 ~L~~d~EelR~~l~p~~~el~~~l~~~~EelR~kl~P~~eeL~~~~~~~~eeLr~kL~ 160 (165)
T 1gs9_A 103 RLGADMEDVRGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLA 160 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhh
No 438
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=61.65 E-value=28 Score=43.09 Aligned_cols=94 Identities=14% Similarity=0.040 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-HHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQE------RLKSIQAGFLQNGRSAMDVENEEKNL----EKE-VALA 1707 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~------~le~lk~~l~~~~~~~~~a~~~ae~a----~~~-a~~a 1707 (1807)
+++-++..+..+++.++++++.+.+.+.++|..+.+ ..+.+...+...........++++.+ ..+ +..+
T Consensus 37 d~~~~ld~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 116 (484)
T 3lss_A 37 DAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDL 116 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchhhHHHhhHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1708 QKQASGLRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1708 e~~l~el~~~l~~~~~~l~~~~~~l 1732 (1807)
+++++++++++.++++++......+
T Consensus 117 ~~~i~~le~~~~~~~~~~~~~l~~i 141 (484)
T 3lss_A 117 SDQVAGLAKEAQQLEEERDKLMLNV 141 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
No 439
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=61.64 E-value=8.8 Score=47.73 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccccC---CCCcceeEEEeccceeEEEEEEEEEcC-----------CCCCcEEEEEecCCC
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSE---NGVENVTIQLDMEAEFHFTHLIIYFKT-----------FRPAAMLIERSHDFG 162 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~---~~~~~v~i~l~l~~~f~~~~~~~~f~s-----------~rP~~~~iers~d~g 162 (1807)
.|.+.++.+. +..++|.+. ....+--|++||+....|+-|+++... ..-.+..|+=|.| |
T Consensus 318 ~~~p~~arl~-----~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~yS~d-g 391 (460)
T 2qqo_A 318 LWSPSAARLV-----SSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-G 391 (460)
T ss_dssp SCCGGGGBTT-----TCSSCBCCSSSSCCTTTCCEEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEEEEEEEEESS-S
T ss_pred ccCcchhhhc-----cCCCCcccccccCCCccceEEEcCCCceEEEEEEecCCCCCCCccccccceeEEEEEEEEEeC-C
Q ss_pred CCccchh
Q psy2547 163 KTWQVYR 169 (1807)
Q Consensus 163 ~~w~~~q 169 (1807)
.+|++|.
T Consensus 392 ~~W~~~~ 398 (460)
T 2qqo_A 392 KDWEYIQ 398 (460)
T ss_dssp SSCEECE
T ss_pred CceEEEE
No 440
>3a5c_G V-type ATP synthase subunit D; V-ATPase, asymmetric, rotation, vacuolar type, hydrolase, ATP synthesis, ATP-binding, hydrogen ION transport; HET: ADP; 4.51A {Thermus thermophilus} PDB: 3a5d_G 3j0j_G*
Probab=61.45 E-value=1.5e+02 Score=32.70 Aligned_cols=193 Identities=12% Similarity=0.043 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Q psy2547 1442 ESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDHAASVRNK--TAAYVA 1519 (1807)
Q Consensus 1442 ~~~~eeL~~~~~~~~~~~~a~~~ae~a~~~l~~~~~~~~~l~~~~~~~~~~~~~a~~~A~~~~~~a~~~~~~--~e~~~~ 1519 (1807)
+..+-.++.++.....-...+ +...+.+..+...+..++.+.+.++.++...|...+..|...... ++....
T Consensus 8 R~~L~~lK~rL~~a~rG~~LL------k~Krd~L~~ef~~i~~~~~~~r~~~~~~~~~a~~~l~~a~~~~g~~~~~~~~~ 81 (223)
T 3a5c_G 8 RMNLLQRRGQLRLAQKGVDLL------KKKRDALVAEFFGLVREAMEARKALDQAAKEAYAALLLAQAFDGPEVVAGAAL 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------------
T ss_pred HHHHHHHHHHHHHHHHhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHh
Q ss_pred HHHHHHHHHHHHhhCCCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1520 STSNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKA 1599 (1807)
Q Consensus 1520 ~~~~l~~~lk~~l~~~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a 1599 (1807)
......+---...+..+...+.++..........+..++..+++....+.+++..+-.+...-....-....++...++.
T Consensus 82 ~~~~~~~v~~~~~nImGV~vP~~~~~~~~~~~ygl~~t~~~ld~a~~~~~~~l~~lvelA~le~~~~~L~~eIkkT~RRV 161 (223)
T 3a5c_G 82 GVPPLEGVEAEVENVWGSKVPRLKATFPDGALLSPVGTPAYTLEASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRV 161 (223)
T ss_dssp --------------------------------------------------CHHHHHHTHHHHHHHHHHHTHHHHHHTHHH
T ss_pred cCCCCeEEEEEEEEEEEEEeceEEeccCCCCCcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q ss_pred HHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1600 NLTKA-GADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDD 1640 (1807)
Q Consensus 1600 ~~a~~-ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~ 1640 (1807)
+.++. -|-.+++.+.-+...|++.+..-----+.+++....
T Consensus 162 NALE~viIP~le~tikyI~~~LdE~EReef~RlKkiK~k~~~ 203 (223)
T 3a5c_G 162 NALEQVVIPGIRAQIRFIQQVLEQREREDTFRLKRIKGKIEA 203 (223)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
No 441
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=61.36 E-value=55 Score=33.79 Aligned_cols=85 Identities=7% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH--------------------------------------
Q psy2547 1633 AIQTAKDDISAARKDLSQITNDLDDA---QQKSNETNVKVKL-------------------------------------- 1671 (1807)
Q Consensus 1633 ~l~~a~~~i~~~~~~l~~ie~~l~~~---e~~l~~~e~~l~~-------------------------------------- 1671 (1807)
+++.+...++.++..+..+...+..+ +.++.+...-++.
T Consensus 10 ~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~v~lG~g 89 (151)
T 2zdi_C 10 ELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAIVSVGSG 89 (151)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEEEEeCCC
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1672 ------LQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSR 1717 (1807)
Q Consensus 1672 ------l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~ 1717 (1807)
+.+-++-+++++..++..++.+...+..++.+++.++..+.++...
T Consensus 90 ~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~~ 141 (151)
T 2zdi_C 90 YAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQK 141 (151)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred eEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 442
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=61.33 E-value=17 Score=37.56 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1719 QETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1719 ~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I 1795 (1807)
......+.+....+-....+++.|.+.+=.+...-+++.++|++|+++++..++++.+..++-+.+-++++.+...|
T Consensus 53 ~~f~~~~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~i 129 (151)
T 1yke_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDF 129 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 443
>3tkl_B LIDA protein, substrate of the DOT/ICM system; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Legionella pneumophila}
Probab=61.29 E-value=14 Score=39.19 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy2547 1643 AARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALA----QKQASGLRSRY 1718 (1807)
Q Consensus 1643 ~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~a----e~~l~el~~~l 1718 (1807)
.+.++|.++-.+++.+.++..+-..+=+.|..+|+.|+++-..+..+...-+..++++....++- .+++.+..+.+
T Consensus 11 ~a~ke~q~~~~~ye~ai~~~qen~~k~e~L~~rl~kLE~qq~~lt~KY~~Ye~sL~eF~~~sd~yeal~~e~ine~i~~~ 90 (267)
T 3tkl_B 11 QADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFEKLLTDSEELSLSEINEKMKAF 90 (267)
T ss_dssp ----------------------------------------------------------------CCCCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhcCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1719 QETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEA 1765 (1807)
Q Consensus 1719 ~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~ 1765 (1807)
....+.+.++.+..-....++.+|+.+-..+. .++..|+.+..
T Consensus 91 ~~~se~~T~imEs~p~DeeEa~kLlhKh~~~~----~KlaNLQdl~d 133 (267)
T 3tkl_B 91 SKDSEKLTQLMEKHKGDEKTVQSLQREHHDIK----AKLANLQVLHD 133 (267)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HhhhHHHHHHHhcCcccHHHHHHHHHHhcccc----hhhhhHHHHHH
No 444
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=61.27 E-value=9.9 Score=45.08 Aligned_cols=88 Identities=10% Similarity=0.187 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1562 RERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDI 1641 (1807)
Q Consensus 1562 ~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i 1641 (1807)
.++..++..+...|..++..+..++..+..++.-.++.+.+.++-.-.+.++++++.++..++..++.++.+++.++.++
T Consensus 65 ~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l 144 (341)
T 3fpp_A 65 EQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL 144 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHH
Q psy2547 1642 SAARKDLS 1649 (1807)
Q Consensus 1642 ~~~~~~l~ 1649 (1807)
+.++..++
T Consensus 145 ~~a~~~l~ 152 (341)
T 3fpp_A 145 DTAKTNLD 152 (341)
T ss_dssp TTTTTTTT
T ss_pred HHHHHhhh
No 445
>1qoy_A Hemolysin E; toxin, membrane pore former, cytolysin, pores; 2.0A {Escherichia coli} SCOP: h.4.4.1 PDB: 2wcd_A
Probab=61.19 E-value=2.3e+02 Score=32.41 Aligned_cols=194 Identities=13% Similarity=0.048 Sum_probs=0.0
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1602 TKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISA-----------ARKDLSQITNDLDDAQQKSNETNVKVK 1670 (1807)
Q Consensus 1602 a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~-----------~~~~l~~ie~~l~~~e~~l~~~e~~l~ 1670 (1807)
+..+++.+++.++.+...+..-+..++..- .+.++++.|+. ++++|.++......+.....+....+=
T Consensus 21 ~~~~~e~vk~al~Sls~iv~kY~~elD~kv-kf~~LQ~aId~ID~~MlgY~G~AK~~LD~lRslns~A~ltY~~cv~~Vf 99 (318)
T 1qoy_A 21 ADKTVEVVKNAIETADGALDLYNKYLDQVI-PWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVY 99 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHS-CHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHhhhcCCcHHHHhhHHHHHhhHHHHHHHHHHHHHHH
Q ss_pred H--------------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hH
Q psy2547 1671 L--------------LQER--LKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAES-SG 1733 (1807)
Q Consensus 1671 ~--------------l~~~--le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~-l~ 1733 (1807)
+ .-.. -+.....-.-+-..+.++...++.+...++.+++...++.+.+..+...+..--.. ..
T Consensus 100 EWCvsinsTl~~~ip~i~~~~~~lS~~dkdilW~iia~al~~L~Ka~~SLe~L~~v~~~~~~Lf~~ml~dv~~DFg~~~G 179 (318)
T 1qoy_A 100 EWCGVATQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSS 179 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHHHHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCC
Q ss_pred HHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1734 LKRARGQMLLNK-------------------------------ASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIA 1782 (1807)
Q Consensus 1734 ~~~~r~~~l~~~-------------------------------a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~ 1782 (1807)
--..+..+++++ +..++++++....=.+.|.++|++..+.+++...++.
T Consensus 180 yYgk~~~ki~~~~~aga~~~iv~gpfga~i~~~~a~~f~e~~~i~s~k~~ikaI~~FF~~L~~kI~eA~~~~D~v~~~L~ 259 (318)
T 1qoy_A 180 YFQSQVDKIRKEAYAGAAAGVVVGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLT 259 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEECGGGCEEEHHHHTTSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhhhcchhhhhhccHHHHHhcccchhHHhhccccCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHH
Q psy2547 1783 ELQKRIQSCINFIV 1796 (1807)
Q Consensus 1783 ~L~~el~~l~~~I~ 1796 (1807)
.....+-.+..+++
T Consensus 260 ~e~~~i~~~~~~~~ 273 (318)
T 1qoy_A 260 TEIAAIGEIKTETE 273 (318)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccc
No 446
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=61.02 E-value=8.5 Score=49.43 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccccC---CCCcceeEEEeccceeEEEEEEEEEcC-----------CCCCcEEEEEecCCC
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSE---NGVENVTIQLDMEAEFHFTHLIIYFKT-----------FRPAAMLIERSHDFG 162 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~---~~~~~v~i~l~l~~~f~~~~~~~~f~s-----------~rP~~~~iers~d~g 162 (1807)
.|.+.++.+. +..++|-+. ....+--|++||+....|+-|+++... .-..+..|+=|.| |
T Consensus 437 ~~~p~~arl~-----~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~~S~d-g 510 (579)
T 2qqk_A 437 LWSPSAARLV-----SSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSYSLN-G 510 (579)
T ss_dssp -CCGGGGBTT-----TCSSCBCCSSTTCCTTTCCEEEEEEEEEEEEEEEEECBC---------CCBCEEEEEEEEESS-S
T ss_pred ccCchhheec-----ccCcCCcccccccCCccceEEEecCCceEEEEEEeCCCCCCCCccccccceeeEEEEEEEEcC-C
Q ss_pred CCccchh
Q psy2547 163 KTWQVYR 169 (1807)
Q Consensus 163 ~~w~~~q 169 (1807)
.+|++|.
T Consensus 511 ~~W~~~~ 517 (579)
T 2qqk_A 511 KDWEYIQ 517 (579)
T ss_dssp SCCEECB
T ss_pred CceeEEE
No 447
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=61.00 E-value=70 Score=39.79 Aligned_cols=164 Identities=9% Similarity=0.096 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHH
Q psy2547 1606 ADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQK--------SNETNVKVKLLQERLK 1677 (1807)
Q Consensus 1606 a~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~--------l~~~e~~l~~l~~~le 1677 (1807)
+..+....-++..-.+++......++-.+..+..++.++++.+..++.+++..... ...+..-+...+.+++
T Consensus 266 v~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~~~d~f~~~m~~Fl~~a~~~~~ 345 (483)
T 2j1d_G 266 ITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPGDKFVSVVSQFITVASFSFS 345 (483)
T ss_dssp HHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCchhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHH
Q psy2547 1678 SIQAGFLQNGRSAMDVEN---------EEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESS-GLKRARGQMLLNKAS 1747 (1807)
Q Consensus 1678 ~lk~~l~~~~~~~~~a~~---------~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l-~~~~~r~~~l~~~a~ 1747 (1807)
.++..+......+.++.. ..+++-......-..++...++..+++++.+..+... .++..+.+..+++..
T Consensus 346 ~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~eekr~~~e~~~~~~~~~~r~~ 425 (483)
T 2j1d_G 346 DVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRERERKM 425 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1748 QLSVNTTAKLKQLNETEAMFNS 1769 (1807)
Q Consensus 1748 ~l~~~~~~~~~~l~~Le~~i~~ 1769 (1807)
.-.....+....+.+|...|..
T Consensus 426 ~~~~~~~~~~g~~D~Ll~~Lr~ 447 (483)
T 2j1d_G 426 RKAKENSEESGEFDDLVSALRS 447 (483)
T ss_dssp HHC-------------------
T ss_pred ccCCCCCcccccHHHHHHHHhC
No 448
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=60.94 E-value=11 Score=46.03 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy2547 1669 VKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQ 1748 (1807)
Q Consensus 1669 l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~ 1748 (1807)
++-+.+..+.++..+..-...+. ..++-++-.+...++.++++++.+.+++.+++.+ .....+.+|.++++.
T Consensus 4 ~~~~r~~~~~~~~~~~~r~~~~~--~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~------~~~~~~~~l~~~~~~ 75 (421)
T 1ses_A 4 LKRLRQEPEVFHRAIREKGVALD--LEALLALDREVQELKKRLQEVQTERNQVAKRVPK------APPEEKEALIARGKA 75 (421)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS------SCHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHhCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccccHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1749 LSVNTTAKLKQLNETEAMFNSQESEL 1774 (1807)
Q Consensus 1749 l~~~~~~~~~~l~~Le~~i~~~e~~l 1774 (1807)
+.+++.....++.++++++..+...|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~i 101 (421)
T 1ses_A 76 LGEEAKRLEEALREKEARLEALLLQV 101 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
No 449
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=60.83 E-value=6.5 Score=48.80 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCC-------CCCcEEEEEecCCCCCccchh
Q psy2547 98 HKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTF-------RPAAMLIERSHDFGKTWQVYR 169 (1807)
Q Consensus 98 h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~-------rP~~~~iers~d~g~~w~~~q 169 (1807)
|.++++.+. ...+.|.+.....+--|++||++...|+-|+++.... .-.++.|+=|.| |.+|.+|.
T Consensus 165 ~~p~~arl~-----~~~~~W~~~~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~d-g~~W~~~~ 237 (450)
T 2qqm_A 165 WSAERSRLN-----YPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIK 237 (450)
T ss_dssp GCGGGGBTT-----CSSCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS-SSSEEECB
T ss_pred chhhccccc-----cCCCCccCCCCCCCceEEEcccceEEEEEEeccCCCCCCCCcceeEEEEEEEEeCC-CCceeEEe
No 450
>1urq_A M-tomosyn isoform; transport protein, tomosyn-snare complex, exocytosis, four helical bundle, coiled coil; 2.0A {Rattus norvegicus} SCOP: h.1.15.1
Probab=60.80 E-value=37 Score=29.57 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1661 KSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQ 1719 (1807)
Q Consensus 1661 ~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~ 1719 (1807)
.+..+..++.+....+.....++.+--++++.+..+.+.+...+...+....+|..+|+
T Consensus 5 ~i~~v~~qv~ev~~iM~~ni~kvlERGekL~~L~dkT~~L~~~A~~F~~~A~~l~~Kyk 63 (63)
T 1urq_A 5 GIEGVKGAASGVVGELARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYK 63 (63)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 451
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=60.68 E-value=63 Score=29.14 Aligned_cols=65 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1651 ITNDLDDAQQKSNETNVKVKL-----LQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLR 1715 (1807)
Q Consensus 1651 ie~~l~~~e~~l~~~e~~l~~-----l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~ 1715 (1807)
+...+.+++.+.+.+..+-.. +..++++++..+......+..++.++.++...+..++.+++.++
T Consensus 7 L~~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 7 CTAAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 452
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=60.44 E-value=2e+02 Score=31.60 Aligned_cols=182 Identities=11% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHhHHhhhhccCCCH
Q psy2547 1481 EVFRGITTAKQESHAANILAKE--AYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNP 1558 (1807)
Q Consensus 1481 ~l~~~~~~~~~~~~~a~~~A~~--~~~~a~~~~~~~e~~~~~~~~l~~~lk~~l~~~~~~~~~i~~la~~vl~~~i~~~~ 1558 (1807)
+++.+..+.-.++.+++..+.+ ....+.....++...-.+..++..++..-|. ...-.|...
T Consensus 30 ~ll~~~a~~v~~~a~~L~~~l~~~~~~~~~~~~~~I~~lE~~aD~i~~~i~~~L~----------------~~fitP~dR 93 (227)
T 3l39_A 30 PLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELS----------------TTFITPFDR 93 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HCSCCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcCcCCCCH
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHH------HHHHHHHHHHHHHHHHHhhhHHHHH---HHHHHHHHHHHHHHHHHH
Q psy2547 1559 EQIRERANEINNVIKSLTDIDTILTETA------GDLAKANDLKRKANLTKAGADSTKN---TVQKIVDVLTEARTAQDM 1629 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~~~~L~~~~~~l~~~~------~~l~~a~~L~~~a~~a~~ea~~l~~---~l~~l~~~L~~a~~~~~~ 1629 (1807)
++|..|+..+.+.+..++++...+.-.. ...+-++.+.+-++.+...+..+.+ +...+.+...++....++
T Consensus 94 eDI~~L~~~lDdI~D~ie~~a~~l~l~~~~~~~~~~~~l~~~i~~~~~~l~~ai~~L~~~~~~~~~i~~~~~eI~~lE~e 173 (227)
T 3l39_A 94 EDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQ 173 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1630 AEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1630 a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~l 1679 (1807)
+..-...+...|-......-.+ -.+.++-..|+.+..+.++.-..|+.+
T Consensus 174 aD~l~~~~~~~Lf~~e~d~i~~-i~~keI~~~Le~~aD~~Edva~~l~~I 222 (227)
T 3l39_A 174 ADDVYELFITKLFEEEKDCIEL-IKIKEIMHELEKTTDAAEHVGKILKNL 222 (227)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
No 453
>3pik_A Cation efflux system protein CUSC; beta-barrel, lipoprotein, outer membrane; HET: UNL; 2.30A {Escherichia coli}
Probab=60.35 E-value=2.8e+02 Score=33.28 Aligned_cols=222 Identities=9% Similarity=0.000 Sum_probs=0.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Q psy2547 1570 NVIKSLTDIDTILTETAGDLAKAND-LKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQT---AKDDISAAR 1645 (1807)
Q Consensus 1570 ~~~~~L~~~~~~l~~~~~~l~~a~~-L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~---a~~~i~~~~ 1645 (1807)
.....++.+...+..++..+..+.. +..++..+-.++...+..++-+++.+..++..++.++...+. ...++..++
T Consensus 122 ~~~~~~~~A~~~~~~a~~~~~~~~~~l~~~v~~ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~d~~~a~ 201 (446)
T 3pik_A 122 RLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR 201 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHhHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHHHHHHH
Q psy2547 1646 KDLSQITNDLDDAQQKSNETNVKVKL----------------------------------LQERLKSIQAGFLQNGRSAM 1691 (1807)
Q Consensus 1646 ~~l~~ie~~l~~~e~~l~~~e~~l~~----------------------------------l~~~le~lk~~l~~~~~~~~ 1691 (1807)
..+.+++..+..++..+..+...|.. -.-.|..++..+...+..++
T Consensus 202 ~~~~~a~~~~~~a~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~al~~~p~l~~~~~~~~~a~~~~~ 281 (446)
T 3pik_A 202 GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIG 281 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCCCCCCCCGGGBCCCCCCTTCBGGGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHhCCCCCCchhhcccccCCCCCCCCCCCHHHHHHhChHHHHHHHHHHHHHHHHH
Q ss_pred HHHH------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1692 DVEN------------------------------------------------EEKNLEKEVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1692 ~a~~------------------------------------------------~ae~a~~~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
.++. ++..++.+++.++..++.++.++...-.
T Consensus 282 ~a~~~~~P~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~plf~gg~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~v~ 361 (446)
T 3pik_A 282 AARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVA 361 (446)
T ss_dssp HHHHTTSCEEEEEEEEEEEESSSTTSSCTTTEEEEEEEEEECCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCceEEEeecccccccHHhhcCCccchhccchheeeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1724 KLLSKAESSGLKRARGQMLLNKASQLSVNTTAKL-------KQLNETEAMFNSQESELTELSKNIAELQKRIQSC 1791 (1807)
Q Consensus 1724 ~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~-------~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l 1791 (1807)
..-.......+.....++....++...+...... .++-..+..+...+..+.....++.....+|...
T Consensus 362 ~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~s~~dll~a~~~l~~a~~~~~~a~~~~~~a~~~L~~~ 436 (446)
T 3pik_A 362 DALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISLYTA 436 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 454
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=60.20 E-value=3.2e+02 Score=33.79 Aligned_cols=251 Identities=11% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhCC---CCChHHHHHHhHHhhhhc-cCCCH
Q psy2547 1485 GITTAKQESHAANILAKEAYDHAASVRNKTAAY--VASTSNITKQLDEFLNAP---GATLADIRNISGLAVNKN-IQSNP 1558 (1807)
Q Consensus 1485 ~~~~~~~~~~~a~~~A~~~~~~a~~~~~~~e~~--~~~~~~l~~~lk~~l~~~---~~~~~~i~~la~~vl~~~-i~~~~ 1558 (1807)
+....+.++.+....+......+..+-..+... +..+-+++-.+.+|++.- .+.-=.+..+.....-.. .....
T Consensus 180 ~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~~d~k~ 259 (483)
T 2j1d_G 180 QSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNI 259 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCSSSCCCSCCCGGGGGGGGGSBCSSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccCCCCCceeeehHHHHhhhhcccCCCCCc
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy2547 1559 EQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVA----- 1633 (1807)
Q Consensus 1559 ~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~----- 1633 (1807)
.-+.-++..+.+....+-++...|..+... ++..+..+..++.++...+..++..++.....
T Consensus 260 TLLhylv~~v~~~~p~l~~f~~eL~~v~~A-------------skv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~~~ 326 (483)
T 2j1d_G 260 TLLHYLITIVENKYPSVLNLNEELRDIPQA-------------AKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPG 326 (483)
T ss_dssp BHHHHHHHHHHHHCGGGGGHHHHTTTHHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTT
T ss_pred cHHHHHHHHHHHhCchhhchHHHHhhHHHH-------------hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCch
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1634 ---IQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQER--LKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQ 1708 (1807)
Q Consensus 1634 ---l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~--le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae 1708 (1807)
...+..=+..++.++..++..+..+......+..-..+-... .++.=..+..--..+..+.++....+.+.++.+
T Consensus 327 d~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~ee 406 (483)
T 2j1d_G 327 DKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEE 406 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHH
Q psy2547 1709 KQASGLRSRYQETDNKLLSKAESSGLKRA-RGQMLLNKASQ 1748 (1807)
Q Consensus 1709 ~~l~el~~~l~~~~~~l~~~~~~l~~~~~-r~~~l~~~a~~ 1748 (1807)
+.+....+..++.+..-...+........ -+..|.+.+++
T Consensus 407 kr~~~e~~~~~~~~~~r~~~~~~~~~~~~g~~D~Ll~~Lr~ 447 (483)
T 2j1d_G 407 RRARMEAQLKEQRERERKMRKAKENSEESGEFDDLVSALRS 447 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccccHHHHHHHHhC
No 455
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=60.19 E-value=6.9 Score=50.96 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=0.0
Q ss_pred CCCccccccccCCCCCCccccccCCCCc----ceeEEEeccceeEEEEEEEEE-----cCCCCCcEEEEEecCCCCCccc
Q psy2547 97 SHKIHNIVYATVPRTKTISWWQSENGVE----NVTIQLDMEAEFHFTHLIIYF-----KTFRPAAMLIERSHDFGKTWQV 167 (1807)
Q Consensus 97 ~h~~~~~~~~~~~~~~~~~wwqs~~~~~----~v~i~l~l~~~f~~~~~~~~f-----~s~rP~~~~iers~d~g~~w~~ 167 (1807)
.|.+.++.+ ++....++|.+..... +--|++||++...|+-|+++. ...+-.++.|+-|.| |.+|..
T Consensus 354 ~~~p~~arl---~~~~~~~~W~~~~~~~~~~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~yS~D-g~~W~~ 429 (647)
T 1sdd_B 354 YWEPKLARL---NNGGSYNAWIAEKLSTEFNPEPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAYSLD-RKNWRI 429 (647)
T ss_dssp TCCGGGCBT---TCCSSSCSEECSCCCCSSCCCSCEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEEEEESS-SSSCEE
T ss_pred ccccceeee---cCCCCcccccCCCCcccccccceEEeccCCeEEEEEEEEcCCCCCCCccEEEEEEEEEEcC-CCceEE
Q ss_pred hh
Q psy2547 168 YR 169 (1807)
Q Consensus 168 ~q 169 (1807)
|.
T Consensus 430 ~~ 431 (647)
T 1sdd_B 430 FK 431 (647)
T ss_dssp CC
T ss_pred ec
No 456
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=59.88 E-value=34 Score=40.76 Aligned_cols=158 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Q psy2547 1645 RKDLSQITNDLDDAQQKSNETNVK-----------VKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKE---VALAQKQ 1710 (1807)
Q Consensus 1645 ~~~l~~ie~~l~~~e~~l~~~e~~-----------l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~---a~~ae~~ 1710 (1807)
...++.....+..++.-++.+... ++++++.++.+..++.++.+++.+++.++..++.. ++.++.-
T Consensus 59 ~~~~~~~~~~~~k~~~~~~~L~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~p~ 138 (357)
T 3rrk_A 59 EAELKRWEAVVSQAEQSLTVVGLATVPSSKPFTGSLEEAEAVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAAL 138 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCCSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhHHHHHHHHHHHHHHHhcccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh
Q ss_pred H--------------HH-HHHHHHHHHHHHHHHHHH-------------------hHHHHHHHHHHHHHHHHHHHHHH--
Q psy2547 1711 A--------------SG-LRSRYQETDNKLLSKAES-------------------SGLKRARGQMLLNKASQLSVNTT-- 1754 (1807)
Q Consensus 1711 l--------------~e-l~~~l~~~~~~l~~~~~~-------------------l~~~~~r~~~l~~~a~~l~~~~~-- 1754 (1807)
. .- -.+.+..++..+...... ......++.++.....--.-.+.
T Consensus 139 ~~~ld~~~~~g~~~g~ip~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~v~~il~s~~f~~~~~p~~ 218 (357)
T 3rrk_A 139 AHGLDESPRLGVIPFLVAKPEELEAVRKALQEALADRFVLEAEPLENQLAALVVVKRSELEAARSSLSRLGLAELRFPGA 218 (357)
T ss_dssp TTTTTTCTTEEEEEEEESCHHHHHHHHHHHHHHHTTSCEEEEEECSSSEEEEEEEEGGGHHHHHHHHHTTTCCBCCCCGG
T ss_pred hccCCccceeeeeeEEecChhhHHHHHHHHHHhcCCeEEEEeecCCCcEEEEEEEEHHHHHHHHHHHHHCCCeeccCCcc
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhhc
Q psy2547 1755 ----AKLKQLNETEAMFNSQESELTELSKNIAELQKR----IQSCINFIVDKSNNY 1802 (1807)
Q Consensus 1755 ----~~~~~l~~Le~~i~~~e~~le~le~el~~L~~e----l~~l~~~I~~~~~~Y 1802 (1807)
.-...+++++.++++++++++++++++.++.++ +..+...+...+.+|
T Consensus 219 ~~~~~p~~~l~~l~~~i~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~ 274 (357)
T 3rrk_A 219 YGAMPLGKAAARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKDEVARY 274 (357)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 457
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=59.66 E-value=39 Score=31.88 Aligned_cols=63 Identities=11% Similarity=0.046 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1705 ALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMF 1767 (1807)
Q Consensus 1705 ~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i 1767 (1807)
.++...+..|........+.++...++++....+++.++.+++.|..++.....+|+...+.+
T Consensus 32 qELs~tfarLc~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~~~y 94 (96)
T 1t3j_A 32 QEMATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFSKQF 94 (96)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
No 458
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=59.59 E-value=1.7 Score=55.80 Aligned_cols=80 Identities=24% Similarity=0.634 Sum_probs=0.0
Q ss_pred ee-ecCCCCcCCCCC-CCCC-----CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCcc-CCCcccccCCCCCCCCCC-Cc
Q psy2547 943 IC-ECKEGYRGTRCD-GCLD-----NYFGNPQERGGSCEPCD--CSNNTDLALPGNCD-TLTGKCLQCRYDTEGDHC-QV 1011 (1807)
Q Consensus 943 ~C-~C~~g~~G~~Ce-~C~~-----g~~g~p~~~~~~C~~C~--C~~~~~~~~~~~C~-~~tG~C~~C~~~~~G~~C-~~ 1011 (1807)
.| .|+.-..+..|- .|.. ++| ..++.|.+|. |.+. +....|. +....|+.|.+-..+..| +.
T Consensus 506 ~C~~C~~~~~~~~Cv~~C~~~~g~~~~~----~~~~~C~~Ch~~C~~~---~~~~~C~Gp~~~~C~~C~~~~~~g~Cv~~ 578 (608)
T 1n8y_C 506 QCVNCSHFLRGQECVEECRVWKGLPREY----VSDKRCLPCHPECQPQ---NSSETCFGSEADQCAACAHYKDSSSCVAR 578 (608)
T ss_dssp CBSSBSSEEETTEEESCCSSSSSSSCEE----CSSSBCEECCTTBCCC---SSSCSBSSSSGGGBSSBSSEEETTEEESS
T ss_pred ccccccccCcCCcccccCCCCCCcCccc----CCCCcccccchhhccc---ccCCccCCCCCCCCccccccCcCCeEccc
Q ss_pred ccCCCCCC----------cccCCCCCCc
Q psy2547 1012 CKAGFFGN----------ALEQNCTECT 1029 (1807)
Q Consensus 1012 C~~G~~G~----------~~~~~C~~C~ 1029 (1807)
|++|||++ ...+.|++|.
T Consensus 579 CP~g~~~~~~~~p~~ky~~~~~~C~~C~ 606 (608)
T 1n8y_C 579 CPSGVKPDLSYMPIWKYPDEEGICQPCP 606 (608)
T ss_dssp CCEEECCTTCSCCEEEEECTTSBEEECS
T ss_pred CCCCccccccccccccccccCCeeeeCc
No 459
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=59.45 E-value=23 Score=41.68 Aligned_cols=86 Identities=12% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1709 KQASGLRSRYQETDNKLLSK-----AESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAE 1783 (1807)
Q Consensus 1709 ~~l~el~~~l~~~~~~l~~~-----~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~ 1783 (1807)
++++.+++++++++.++.+- .+.+.+...+...|...++.+. ++.....+++++...++ ...-.+.+++++..
T Consensus 3 ~~l~~~~~r~~el~~~~~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~-~~~~~~~~~~~~~el~~-D~e~~~~a~~e~~~ 80 (354)
T 3d5a_X 3 DKLDRLEEEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIR-EYRKVLEDLEQAESLLD-DPELKEMAKAEREA 80 (354)
T ss_dssp HHHHHHTHHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTSTT-CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCchhhCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHH
Q psy2547 1784 LQKRIQSCINFIV 1796 (1807)
Q Consensus 1784 L~~el~~l~~~I~ 1796 (1807)
|+++++.+..+|.
T Consensus 81 l~~~~~~le~~l~ 93 (354)
T 3d5a_X 81 LLARKEALEKELE 93 (354)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
No 460
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=59.36 E-value=1 Score=56.24 Aligned_cols=95 Identities=24% Similarity=0.677 Sum_probs=0.0
Q ss_pred ccc-cCCCCcccCCCCCCCCCCCCCCCCCCCCCcc-----CCCCc-c-ccCCCcccCCC-CcCCCCccCCCCCCCccCCC
Q psy2547 1060 CDR-CLKNHWKIASGTGCEPCDCDPIGSVDVTECN-----EYTGQ-C-QCKSGFGGRQC-DQCQTNFWGNPNVECFPCDC 1130 (1807)
Q Consensus 1060 C~~-C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~-----~~tg~-C-~C~~g~~G~~C-~~C~~g~~g~~~~~C~~C~C 1130 (1807)
|.. |..++|.. ...| |++ +|. +..-+ | .|+..+.+..| +.|++|||.+....|.+..
T Consensus 192 C~~~C~~~~c~~--~~~C----Ch~-------~C~ggC~GP~~~~~ClsC~~~~~~g~Cv~~CP~g~y~~~~~~C~~~~- 257 (486)
T 2hr7_A 192 CPTICKSHGCTA--EGLC----CHS-------ECLGNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFS- 257 (486)
T ss_dssp CCGGGTTSCBCT--TCCB----CCT-------TBCSCBSSSSCTTSBSSBSSEEETTEEESSCCTTCEEETTTEEECHH-
T ss_pred ccccCCCCCCcC--CCCc----cCc-------ccccCCCCCCCCCccccCccccCCCccccccCCCeEecCCCEEecCc-
Q ss_pred CCCCCCCCccccCCceEe------ccCCc-cccCCCc-CCCCCccC--CCCCCCCC
Q psy2547 1131 DPSGSATSQCHQNNGTCV------CHQGI-GGVRCDT-CARGYIGT--APDCSPCG 1176 (1807)
Q Consensus 1131 ~~~gs~~~~C~~~tG~C~------C~~g~-~G~~C~~-C~~g~~~~--~~~C~~C~ 1176 (1807)
.|....++|. |.+-+ .+..|-. |++||+.+ ...|.+|+
T Consensus 258 --------~C~~c~~~c~~~~~~sC~~~~~~~~~CV~~CP~g~~~~~~~~~C~~C~ 305 (486)
T 2hr7_A 258 --------FCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTPCL 305 (486)
T ss_dssp --------HHHHHHHHHHHTCSSSCCCCEEETTEEESSCCTTEEECTTSCBEEECS
T ss_pred --------ccccCCCcccCCCCcccccEeeECCEecccCCCCcccCCCCCccccCC
No 461
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=59.32 E-value=4 Score=42.14 Aligned_cols=34 Identities=24% Similarity=0.768 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCccCCccccCCCCCce-eeecCCCCcCCCCC
Q psy2547 915 RPCPCPGTVESGLSYADTCQLDPRSQDV-ICECKEGYRGTRCD 956 (1807)
Q Consensus 915 ~~c~C~~~~~~~~~~~~~C~~~~~~~~~-~C~C~~g~~G~~Ce 956 (1807)
..|||.++ ++|........+ .|.|++||.|.+|+
T Consensus 11 ~~cpC~NG--------GtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 11 SNCDCLNG--------GTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp -CCCCCTT--------CEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCCCCC--------CCcCCCccccCCccccCCCCCCCCcee
No 462
>2y44_A GARP, glutamic acid/alanine-rich protein; membrane protein, surface protein; 1.65A {Trypanosoma congolense}
Probab=59.15 E-value=1.8e+02 Score=30.67 Aligned_cols=156 Identities=17% Similarity=0.174 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1565 ANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAA 1644 (1807)
Q Consensus 1565 ~~~i~~~~~~L~~~~~~l~~~~~~l~~a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~ 1644 (1807)
.+++.-+-...+++..+.......+..+-.-..++-+++.++++.-+.++........++.+-..+..+.+.+...+.+.
T Consensus 2 ~~~v~alC~~aeQLRGLp~tV~s~~~~a~a~sskA~eAK~~aeeAV~rAEs~g~n~~kAkEAA~rAt~AaeaA~tAas~v 81 (184)
T 2y44_A 2 VEEVQTMCDVARQLRALETASQSAVAAVVSSAREASEAKERAEKAVERAKSKKRGVDTATEAAARAAAAAQRAETVVSDA 81 (184)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1645 RKDLSQITNDLDDAQQKSNETNVKVKL-------------------------LQERLKSIQAGFLQNGRSAMDVENEEKN 1699 (1807)
Q Consensus 1645 ~~~l~~ie~~l~~~e~~l~~~e~~l~~-------------------------l~~~le~lk~~l~~~~~~~~~a~~~ae~ 1699 (1807)
+.....+...-......++...+.+.. |..-++.+...+... .+.++....+
T Consensus 82 e~~Aa~l~~~~~~~~~~~d~~Lk~va~~~~~~~vr~aA~~Ct~~A~~VTs~SL~~Al~~l~~~~~~~---~~~lr~~~~~ 158 (184)
T 2y44_A 82 RKHAADLTAASKDAIETTDESLRLLATCEADEPIRTAAKKCTGAAAEVTSKSLESAFDALAELLPDG---ADDIREHGAV 158 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCSCCSSCCHHHHHHHHHHHHHHCGGG---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHhccCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHcchh---HHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1700 LEKEVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1700 a~~~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
+...+++|++-+++......+.++
T Consensus 159 ~~~~l~~LE~~~~~a~~a~~~Ae~ 182 (184)
T 2y44_A 159 FVKGLKSLEDDVRTAGEAKYEAEK 182 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
No 463
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=59.13 E-value=1.1e+02 Score=28.33 Aligned_cols=78 Identities=8% Similarity=0.011 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1649 SQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLL 1726 (1807)
Q Consensus 1649 ~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~ 1726 (1807)
.+-.+...-++.+|..+..-+.+.+.+...-+..+..++..++.-+..-.+-..++++++.+++.|..++.++.-+.+
T Consensus 14 ~ECrNvT~lLq~qLT~Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~~~~~ 91 (99)
T 3ni0_A 14 AECRNTTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLRIQKE 91 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 464
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=59.12 E-value=30 Score=30.09 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1754 TAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1754 ~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
..+...+.+|+.+.+.++.+-.++..+|..|+.++..+.+.|.+
T Consensus 19 ~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~e 62 (63)
T 1ci6_A 19 QKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEE 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 465
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=59.01 E-value=1.5e+02 Score=32.36 Aligned_cols=87 Identities=10% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q psy2547 1686 NGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLN-ETE 1764 (1807)
Q Consensus 1686 ~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~-~Le 1764 (1807)
+.+.++-+-..+..++.+...++++.+.+...++++..++++ -+.+...--..|..+-..+.++-..++++++ .|.
T Consensus 123 i~elfd~~~~~~~~~~~~~~~L~~e~~~l~~~~~~l~~qlE~---~v~~K~~~E~~L~~KF~~lLNeKK~KIR~lq~~Ll 199 (213)
T 1ik9_A 123 IRELIAYALDTIAENQAKNEHLQKENERLLRDWNDVQGRFEK---AVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLL 199 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHH
Q psy2547 1765 AMFNSQESELT 1775 (1807)
Q Consensus 1765 ~~i~~~e~~le 1775 (1807)
.+.++.+..+.
T Consensus 200 ~~~~~~~~~~~ 210 (213)
T 1ik9_A 200 NAAQEREKDIK 210 (213)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhhhhhh
No 466
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=58.97 E-value=96 Score=31.99 Aligned_cols=99 Identities=15% Similarity=0.205 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--H
Q psy2547 1577 DIDTILTETAGDLAKANDLKR--KANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVA-IQTAKDDISAARKDLSQ--I 1651 (1807)
Q Consensus 1577 ~~~~~l~~~~~~l~~a~~L~~--~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~-l~~a~~~i~~~~~~l~~--i 1651 (1807)
++.+.+.++...+......+. +|+.+-.+-.+++.-+.+.++...++...+..-+.. .++...+++++.++|.. +
T Consensus 8 ~I~d~A~eL~~aI~eseeyk~yk~A~~~i~~D~eaq~li~eF~~~Q~~~~~~q~~Gk~~~~~e~~~el~~l~~~l~~np~ 87 (151)
T 2pih_A 8 DIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPV 87 (151)
T ss_dssp HHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHcCHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1652 TNDLDDAQQKSNETNVKVKLLQER 1675 (1807)
Q Consensus 1652 e~~l~~~e~~l~~~e~~l~~l~~~ 1675 (1807)
-.++..++.+++.+...|..+-..
T Consensus 88 V~~y~~Ae~~l~~LL~~I~~iI~~ 111 (151)
T 2pih_A 88 IQEFRDSQMEVNDLLQLVAHTISN 111 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
No 467
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=58.87 E-value=46 Score=37.68 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy2547 1675 RLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQAS---GLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSV 1751 (1807)
Q Consensus 1675 ~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~---el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~ 1751 (1807)
++++++..+.+..+....++.+.++++.++..++++.. .+...+..+.+..........+....+...+.+-..+..
T Consensus 4 ~~~~l~~~~~~~~e~r~~lr~~~eql~~~i~~L~~~ap~W~~aq~al~rL~eq~g~~~~ds~~v~~~mq~~Le~Ere~~~ 83 (302)
T 3ibp_A 4 MIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIV 83 (302)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
Q psy2547 1752 NTTAKLKQLNETEAMFNSQES-------ELTELSKNI 1781 (1807)
Q Consensus 1752 ~~~~~~~~l~~Le~~i~~~e~-------~le~le~el 1781 (1807)
..+++....+.|+.+|+.+.+ +|..+.+.+
T Consensus 84 ~Rd~~a~~k~~Le~~ierLs~pgg~~dprL~~LAe~~ 120 (302)
T 3ibp_A 84 ERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERF 120 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHh
No 468
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=58.72 E-value=76 Score=27.31 Aligned_cols=58 Identities=12% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1738 RGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFI 1795 (1807)
Q Consensus 1738 r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I 1795 (1807)
+...++..-.+...--..+...+..|+.+.+.++.+-..+..+|..|..++..+...|
T Consensus 2 R~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 2 RRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 469
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=58.61 E-value=42 Score=31.85 Aligned_cols=67 Identities=12% Similarity=0.172 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1619 VLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQ 1685 (1807)
Q Consensus 1619 ~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~ 1685 (1807)
.|..++..+..++..+.+-+-.....--+-.++..++..++.........++++++.|+.|+.++.+
T Consensus 30 El~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe~DArLAeAka~~~Ka~~~~~el~~~I~~LrqEl~~ 96 (98)
T 4fm3_A 30 ELKLAQDKYAAAQIAMTAESYKKARLLAEQAELDARLAESKVLTQKSKDQLGELDKSLKRLRKQLGE 96 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 470
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=58.49 E-value=2.2e+02 Score=31.50 Aligned_cols=196 Identities=11% Similarity=0.124 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHH------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1575 LTDIDTILTETAGDLAK------------ANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDIS 1642 (1807)
Q Consensus 1575 L~~~~~~l~~~~~~l~~------------a~~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~ 1642 (1807)
...+...+.++...+.. -+.+.++-..++.....+.+++......+.........+...+.++-...-
T Consensus 6 ~k~~~K~~~R~~q~lkqk~G~~e~T~D~~Fe~~e~rF~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~~~~l~~~y~~~~ 85 (237)
T 4avm_A 6 AKQVQKKFSRAQEKVLQKLGKAVETKDERFEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEW 85 (237)
T ss_dssp -CHHHHHHHHHHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHhhhhHHHHHHcCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHH
Q psy2547 1643 AARKDLSQITNDLDDAQQKSNET-----NVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLE----------KEVALA 1707 (1807)
Q Consensus 1643 ~~~~~l~~ie~~l~~~e~~l~~~-----e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~----------~~a~~a 1707 (1807)
.....+..+...+..+-..+... ..-+.++...+..++..+..-..++-+...-...++ .++..+
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~l~~~vi~Pl~~~~~~~~~i~k~I~KR~~kllDyd~~~~~~~kl~~k~~kd~~kl~ka 165 (237)
T 4avm_A 86 DGHEELKAIVWNNDLLWEDYEEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAKA 165 (237)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1708 QKQASGLRSRYQETDNKLLSKAESSGLKRA-----RGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQ 1770 (1807)
Q Consensus 1708 e~~l~el~~~l~~~~~~l~~~~~~l~~~~~-----r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~ 1770 (1807)
+++++..++.|+.+..+|.+.--.+-..+. -+..+..-...+..++......|-++-..++..
T Consensus 166 e~el~~a~~~ye~lN~~L~~eLP~l~~~~~~~~~~~~~~~i~~q~~f~~~~~~~~~~l~~~~~~~~~~ 233 (237)
T 4avm_A 166 EEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLERQ 233 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHh
No 471
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}
Probab=58.48 E-value=1.7e+02 Score=36.97 Aligned_cols=166 Identities=7% Similarity=0.078 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH--------HHHHHHHHHHHHHHH-HHHHHHHH
Q psy2547 1622 EARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQ------KSN--------ETNVKVKLLQERLKS-IQAGFLQN 1686 (1807)
Q Consensus 1622 ~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~------~l~--------~~e~~l~~l~~~le~-lk~~l~~~ 1686 (1807)
+.+..++.+....+.++++++.+++.-+..--++..... .+. ..+..+..-+.+++. ++..+..+
T Consensus 16 eI~~~v~~l~~~~q~~e~~~k~Le~~Qe~F~~~y~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~L 95 (585)
T 1y1u_A 16 QINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESLRIQAQFAQLGQLNPQERMSRETALQQKQVSLETWLQREAQTL 95 (585)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTTSCCSSTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhHhHHhhhccccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1687 GRSAMDVENEEKNLEKEVALAQKQAS-GLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEA 1765 (1807)
Q Consensus 1687 ~~~~~~a~~~ae~a~~~a~~ae~~l~-el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~ 1765 (1807)
.....++..++.+....++.++..+- +-..+.+ .++++.-.-...+...++++.--+...+..-++...++++++|..
T Consensus 96 ~~~R~~l~~~~~~~l~~~~~lq~~ll~~eL~~WK-rrQq~a~iG~p~~~~LD~lQ~w~e~lae~l~q~rqql~~l~~l~~ 174 (585)
T 1y1u_A 96 QQYRVELAEKHQKTLQLLRKQQTIILDDELIQWK-RRQQLAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAEHLCQ 174 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HHHHHHTTTCCCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHH
Q psy2547 1766 MFNS---QESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1766 ~i~~---~e~~le~le~el~~L~~el 1788 (1807)
++.. ....+..+.+.+..|-+.+
T Consensus 175 ~~~~~~~~~~~l~~l~~~~~~ll~~L 200 (585)
T 1y1u_A 175 QLPIPGPVEEMLAEVNATITDIISAL 200 (585)
T ss_dssp TSCCCSTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccccHHHHHHHHHHHHHHH
No 472
>1pl5_A Regulatory protein SIR4; parallel coiled coil homodimer, DNA binding protein/transcription complex; 2.50A {Saccharomyces cerevisiae} SCOP: h.1.23.1
Probab=58.10 E-value=1.1e+02 Score=28.69 Aligned_cols=71 Identities=11% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1609 TKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1609 l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~l 1679 (1807)
+..-+.....+|++.+.++..+..-|..+.+++..-+.+|..++..+.-.++-|+++..+|.+-..+|..+
T Consensus 58 VD~~LSk~~~aldekekqlavaneiirslsdevmrneiritslqgdltftkkclenarsqisekdakinkl 128 (142)
T 1pl5_A 58 VDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKL 128 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHhhheeeeeeccchhhHHHHHHHHHhhhhhhhHHHHHH
No 473
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=58.01 E-value=81 Score=29.45 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1736 RARGQMLLNKASQLSVNTTAKL------KQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1736 ~~r~~~l~~~a~~l~~~~~~~~------~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
.+++..+.+.-..+++..-+.. .++..|+.+...+..+++.+..++..+..+++.+...++.
T Consensus 20 ~eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 20 KDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 474
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=57.74 E-value=37 Score=29.38 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1616 IVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNG 1687 (1807)
Q Consensus 1616 l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~ 1687 (1807)
+-++=.++...+...+.+|..++.-+..++.+|.........++.++..++..+.++++.+.+....+.+.+
T Consensus 1 lIkQNKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~~~d~~~~~~~~~ 72 (74)
T 2q6q_A 1 AVQQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSDANSTFKEMR 72 (74)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------
T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhccccchhhHhcc
No 475
>3b5n_A Synaptobrevin homolog 1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=57.66 E-value=86 Score=26.95 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
..|..++.+|++++..+.++-+++-+--+.++.+..+.+.+..........-..++.+.
T Consensus 2 d~l~~vq~~l~evk~iM~~NI~~vl~RgekLd~L~~ks~~L~~~s~~F~~~a~~l~r~m 60 (61)
T 3b5n_A 2 SRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKAM 60 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 476
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=57.66 E-value=44 Score=32.14 Aligned_cols=77 Identities=10% Similarity=0.148 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy2547 1607 DSTKNTVQKIVDVLTEARTA-Q-DMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKS-NETNVKVKLLQERLKSIQAGF 1683 (1807)
Q Consensus 1607 ~~l~~~l~~l~~~L~~a~~~-~-~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l-~~~e~~l~~l~~~le~lk~~l 1683 (1807)
.+......++...+..+... - +.-++.|.+++..+++++.-|++.+-++..+-... ..+..+|...+.+|+.++.++
T Consensus 22 ~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 22 EIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhc
No 477
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=57.66 E-value=35 Score=39.57 Aligned_cols=129 Identities=9% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHH
Q psy2547 1652 TNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRS---------RYQETD 1722 (1807)
Q Consensus 1652 e~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~---------~l~~~~ 1722 (1807)
...++.+-.+|.++..++.+..++.+.+...+...++.+..-+..++.+.+.+...+++++..+. +.+...
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~a~~af~~~~~~f~~q~~~qe~~~~~~~~~~~~~~~~ 89 (302)
T 2y3a_B 10 EDSVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKCSKEYLERFRREGNE 89 (302)
T ss_dssp -----------CCCSSCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC------CTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCCH
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1723 NKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKN 1780 (1807)
Q Consensus 1723 ~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~e 1780 (1807)
..+..+....+.++.++..|..-...+..++..+..++..+++++..+.-.+-.+...
T Consensus 90 ~e~~~~~~n~e~l~~rl~aL~~~~~~~~~eLsf~kgd~~~ier~ln~~~pdw~~l~k~ 147 (302)
T 2y3a_B 90 KEMQRILLNSERLKSRIAEIHESRTKLEQDLRAQASDNREIDKRMNSLKPDLMQLRKI 147 (302)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhhHHHhHHhhhccCChHHHHHhhc
No 478
>2xhe_B Syntaxin1; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=57.59 E-value=1e+02 Score=35.18 Aligned_cols=158 Identities=7% Similarity=0.061 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q psy2547 1641 ISAARKDLSQITNDLDDAQQKSNETNVKVKLLQE--RLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRS-- 1716 (1807)
Q Consensus 1641 i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~--~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~-- 1716 (1807)
+.+.-..++.|...+..+...+..+......... ..+..+..-.++......+...+..++..+..+++....+..
T Consensus 43 ~~~F~~~~~~I~~~I~~i~~~l~~L~~l~~~~l~t~~~~~~~~~~~~ie~l~~~i~~~~~~i~~~lk~l~~~~~~~~~~~ 122 (279)
T 2xhe_B 43 MADFFNRVKRIRDNIEDIEQAIEQVAQLHTESLVAVSKEDRDRLNEKLQDTMARISALGNKIRADLKQIEKENKRAQQEG 122 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q ss_pred ---------HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH------------------------------HH
Q psy2547 1717 ---------RYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTA------------------------------KL 1757 (1807)
Q Consensus 1717 ---------~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~------------------------------~~ 1757 (1807)
.....+.....+...+..+..+++.++.......+.... ..
T Consensus 123 ~~~~~~~~~e~r~~k~~~~~L~~~f~~~~~~Fq~~Q~~y~e~~k~~~~R~~~i~~~~~~~ee~~~~~e~g~~~~f~q~~~ 202 (279)
T 2xhe_B 123 TFEDGTVSTDLRIRQSQHSSLSRKFVKVMTRYNDVQAENKRRYGENVARQCRVVEPSLSDDAIQKVIEHGTEGIFSGMRL 202 (279)
T ss_dssp CCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCSSCCCCSSTTHHHHHHHC----------
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCchHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2547 1758 KQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDK 1798 (1807)
Q Consensus 1758 ~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~ 1798 (1807)
...+.....|++-.++|..++..|.+|..-...+..-+.++
T Consensus 203 ~~~~~~~~~i~eR~~eI~~Ie~~i~el~~if~dla~lV~~Q 243 (279)
T 2xhe_B 203 EGAEAKLNEIRDRHKDIQQLERSLLELHEMFTDMSTLVASQ 243 (279)
T ss_dssp -------CTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 479
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=57.41 E-value=1.9e+02 Score=30.42 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Q psy2547 1647 DLSQITNDLDDAQQKSNETNVKVKL------------LQERLKSIQAGFLQNGRSAMDVENEEKNLEK----EVALAQKQ 1710 (1807)
Q Consensus 1647 ~l~~ie~~l~~~e~~l~~~e~~l~~------------l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~----~a~~ae~~ 1710 (1807)
++......+.++..=+..++..+.. +-++-+.++..+...+..+..+......+.. ....++..
T Consensus 5 dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~ 84 (185)
T 3lbx_B 5 DKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREK 84 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHH
Q psy2547 1711 ASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKL------------KQLNETEAMFNSQESELTELS 1778 (1807)
Q Consensus 1711 l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~------------~~l~~Le~~i~~~e~~le~le 1778 (1807)
+..|.+..+.+.+........+.... ++......++.+..=+..+. ..++.|.++.+..+..|...+
T Consensus 85 l~~L~~~w~~L~~~w~~r~~~L~~~l-~l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl~~ve~LlkkH~~fe~~l~~~~ 163 (185)
T 3lbx_B 85 LQQVMSRRKEMNEKWEARWERLRMLL-EVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWA 163 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhH
Q ss_pred HHHHHHH
Q psy2547 1779 KNIAELQ 1785 (1807)
Q Consensus 1779 ~el~~L~ 1785 (1807)
.++..|.
T Consensus 164 e~i~~L~ 170 (185)
T 3lbx_B 164 ERFAALE 170 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
No 480
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=57.38 E-value=69 Score=28.43 Aligned_cols=68 Identities=7% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1656 DDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDN 1723 (1807)
Q Consensus 1656 ~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~ 1723 (1807)
+.+..+|+-+.-+-.-...+|.++..+++.+....+.+-.++..++..-..++..+..+..+++.+++
T Consensus 3 ~~~~~~Leml~IrKnma~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~qe 70 (72)
T 2xu6_A 3 QTLVNSLEFLNIQKNSTMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLEE 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
No 481
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=57.26 E-value=18 Score=42.14 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1733 GLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRI 1788 (1807)
Q Consensus 1733 ~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el 1788 (1807)
.........+++++.+++..+.....+|+.|+..++.++.+|++++.+|.+|+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~ 56 (323)
T 1lwu_C 1 DSGQKTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC 56 (323)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 482
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=57.08 E-value=1.2e+02 Score=35.73 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1629 MAEVAIQTAKDDISAARK--DLSQITNDLDDAQQKSNET-----NVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLE 1701 (1807)
Q Consensus 1629 ~a~~~l~~a~~~i~~~~~--~l~~ie~~l~~~e~~l~~~-----e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~ 1701 (1807)
..+..++.+...+..+.. ++..++.++++++.++.+- ..+...+.+++..++..+...+ .+....++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~el~~~~~~p~~w~d~~~~~~~~ke~~~l~~~v~~~~-~~~~~~~d~~~~~ 84 (365)
T 1gqe_A 6 PVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLD-QMKQGLEDVSGLL 84 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1702 KEVAL--AQKQASGLRSRYQETDNKLLSKAESS 1732 (1807)
Q Consensus 1702 ~~a~~--ae~~l~el~~~l~~~~~~l~~~~~~l 1732 (1807)
..+.+ -.+..+++.++++.++.++.+.+..+
T Consensus 85 el~~~e~D~e~~~~a~~e~~~l~~~l~~le~~~ 117 (365)
T 1gqe_A 85 ELAVEADDEETFNEAVAELDALEEKLAQLEFRR 117 (365)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
No 483
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=56.92 E-value=2.5e+02 Score=31.50 Aligned_cols=177 Identities=8% Similarity=0.007 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHH------HH
Q psy2547 1590 AKANDLKRKANLTKAGADSTKNTVQKIVD-----------------------------VLTEARTAQDMAEV------AI 1634 (1807)
Q Consensus 1590 ~~a~~L~~~a~~a~~ea~~l~~~l~~l~~-----------------------------~L~~a~~~~~~a~~------~l 1634 (1807)
..-..+.++.+.++.....+.+......+ .+..+-.+....-. .+
T Consensus 31 ~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p~~~~~L~~~m~~~~~~l~~~s~~ 110 (256)
T 1zww_A 31 DDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNF 110 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------CCHHHHHHHHHHHHHHHHCSSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHhhCCCCChH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1635 QTAKDDISAARKDLSQITNDLDDAQQK--SNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQAS 1712 (1807)
Q Consensus 1635 ~~a~~~i~~~~~~l~~ie~~l~~~e~~--l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~ 1712 (1807)
-.+-.....+..+|.++.......-.. +..+..-++.--..+...+++++..+..++.++.+...+ ++++++
T Consensus 111 g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLdyD~~k~k~~k~------~eeEle 184 (256)
T 1zww_A 111 GPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYKKKRQGKI------PDEELR 184 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTTS------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1713 GLRSRYQETDNKLLSKAESSGLK-RARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQES 1772 (1807)
Q Consensus 1713 el~~~l~~~~~~l~~~~~~l~~~-~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~ 1772 (1807)
.++++++...+.+......+.+. ...+..|..=++.-..=-..-.+.|+++...+.....
T Consensus 185 ~A~~~fe~~~e~~~~~m~~l~~~e~e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~ 245 (256)
T 1zww_A 185 QALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIR 245 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 484
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=56.80 E-value=5.8 Score=42.32 Aligned_cols=35 Identities=23% Similarity=0.701 Sum_probs=0.0
Q ss_pred CccCCCCCCCCCCCccccCCceEeccCCccccCCCc
Q psy2547 1125 CFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDT 1160 (1807)
Q Consensus 1125 C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~ 1160 (1807)
|..=.|.+..+..+.|. ..++|.|++||+|..|++
T Consensus 146 C~~~~C~~~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 146 CQQAECPGGCRNGGFCN-ERRICECPDGFHGPHCEG 180 (188)
T ss_dssp ECCCCCTTCCCTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred ccCCccCCCCCCCCEeC-CCCcccCcCCCCCCCCcC
No 485
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=56.78 E-value=66 Score=27.12 Aligned_cols=49 Identities=4% Similarity=0.119 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1611 NTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQ 1659 (1807)
Q Consensus 1611 ~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e 1659 (1807)
++.-+++.+|...+.+++.+.+.-..+.++++.++++|..++.+-..+.
T Consensus 13 qeylevK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 13 QEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhc
No 486
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=56.77 E-value=1.4 Score=45.02 Aligned_cols=71 Identities=30% Similarity=0.717 Sum_probs=0.0
Q ss_pred cCCCCCCCC---------CCCccccccCCcCCCCCCCCCCCCccccc-CCC-CCCCCCCccCCCCCCCcCCcccccCCCC
Q psy2547 368 CDSCEHNTE---------GRNCERCKQYFYKDPNKEFSDPEVCLRCD-CDP-GGSLDDGICDPYTDDVLVSGKCHCKPNV 436 (1807)
Q Consensus 368 C~~C~~nt~---------G~~C~~C~~g~~~~~~~~~~~~~~C~~C~-C~~-~gs~~~~~C~~~~~~~~~~G~C~Ck~~~ 436 (1807)
|..|..++. ...|..|.+|+|.+.+ +....|++|. |++ .|.+....|.... .-.|.|++|+
T Consensus 18 C~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~~---n~~~~C~~C~~C~~~~g~~~~~~CT~t~-----dtvC~C~~G~ 89 (134)
T 4fhq_A 18 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHL---NGLSKCLQCQMCDPAMGLRASRNCSRTE-----NAVCGCSPGH 89 (134)
T ss_dssp EECBCTTEEEEECCC--CCCEEEECCTTEECCSC---BCCSSCEECCCCCGGGTEEEEECCCSSS-----CCEEEECTTE
T ss_pred CCCCCCCCEecccCCCCCCCcccCCCCCCEecCC---CCCCcCcCCCCCCccCCeEEeccCCCCC-----CccccCCCCC
Q ss_pred C-----CCCCCcCCC
Q psy2547 437 G-----GRRCDMCKD 446 (1807)
Q Consensus 437 ~-----G~~Cd~C~~ 446 (1807)
. +..|+.|.+
T Consensus 90 ~c~~~~~~~C~~C~~ 104 (134)
T 4fhq_A 90 FCIVQDGDHCAACRA 104 (134)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EecCCCCCCCcCCCC
No 487
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=56.62 E-value=98 Score=31.15 Aligned_cols=101 Identities=7% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1646 KDLSQITNDLDDAQQKSNETNVKVKL--------------------------LQERLKSIQAGFLQNGRSAMDVENEEKN 1699 (1807)
Q Consensus 1646 ~~l~~ie~~l~~~e~~l~~~e~~l~~--------------------------l~~~le~lk~~l~~~~~~~~~a~~~ae~ 1699 (1807)
.+|.+++..+..+-...-++-.-|.. +...++++-..+-...+.++.+-..+=.
T Consensus 3 DrlTQLQd~ldqla~~f~nsig~Lq~~a~p~~~~~~~~~~~~~~~~~~~~~~f~~~~~ela~dli~k~kqIe~LIdsLP~ 82 (132)
T 1ykh_B 3 DRMTQLQICLDQMTEQFCATLNYIDKNHGFERLTVNEPQMSDKHATVVPPEEFSNTIDELSTDIILKTRQINKLIDSLPG 82 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC---------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy2547 1700 LEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKA 1746 (1807)
Q Consensus 1700 a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a 1746 (1807)
+...-++-.+.+.+|.++++++.+++.+...+.+....+++.+...+
T Consensus 83 ~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i 129 (132)
T 1ykh_B 83 VDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDF 129 (132)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 488
>2d4y_A HAP1, flagellar HOOK-associated protein 1; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 2.10A {Salmonella typhimurium}
Probab=56.38 E-value=1.7e+02 Score=36.11 Aligned_cols=136 Identities=8% Similarity=0.081 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhHHHHHHHHH
Q psy2547 1665 TNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRS---RYQETDNKLLSKAESSGLKRARGQM 1741 (1807)
Q Consensus 1665 ~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~---~l~~~~~~l~~~~~~l~~~~~r~~~ 1741 (1807)
+..++.........++.....+.+.-.-+-+.-..+...+...-.-+.++.. ........++....-......-..+
T Consensus 7 l~~q~r~~~s~~~~~~~~~~~l~~le~~~~~~~~gl~~~l~~ff~alq~la~~P~~~~~R~~vl~~a~~La~~~n~~~~~ 86 (463)
T 2d4y_A 7 ITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQY 86 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhh
Q psy2547 1742 LLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELS-----KNIAELQKRIQSCINFIVDKSN 1800 (1807)
Q Consensus 1742 l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le-----~el~~L~~el~~l~~~I~~~~~ 1800 (1807)
|....+.+..++.....++..+.++|.++.++|...+ ..-..|..+-+.++++|.+.+.
T Consensus 87 L~~~~~~~n~~i~~~V~~iN~l~~qIa~LN~qI~~~~~~~~g~~~ndLlDqRD~ll~eLS~~v~ 150 (463)
T 2d4y_A 87 LRDQDKQVNIAIGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVG 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHhHHHHHHHHHHHHhhcC
No 489
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=56.13 E-value=45 Score=31.61 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1701 EKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSK 1779 (1807)
Q Consensus 1701 ~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~ 1779 (1807)
..++..++.+...++..+.+++..... ++......+..++.++..+..++...+++.++|-+-.-.++.+|..+..
T Consensus 11 ~~~~~~Lq~~~~~LE~~l~e~E~~~~~---e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrk 86 (95)
T 3mov_A 11 ENLYFQGQKESRACLERIQELEDLLAK---EKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRK 86 (95)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 490
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=56.10 E-value=41 Score=33.19 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1700 LEKEVALAQKQASGLRSRYQETDNKLLS----------KAESSGLKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNS 1769 (1807)
Q Consensus 1700 a~~~a~~ae~~l~el~~~l~~~~~~l~~----------~~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~ 1769 (1807)
+..++.+++.++.++...++.+...-.. ....+.....++..| ..|...+.+...++..|+.++..
T Consensus 11 l~~KvAElekkv~~lek~lk~~~e~d~e~y~ke~~~~~~qsele~k~aeLe~l----eeL~~ki~eL~~kvA~le~e~~~ 86 (125)
T 2pms_C 11 PQAKIAELENQVHRLEQELKEIDESESEDYAKEGFRAPLQSKLDAKKAKLSKL----EELSDKIDELDAEIAKLEDQLKA 86 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCC------------CHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHhHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHHHH
Q ss_pred HHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy2547 1770 QESE-------LTELSKNIAELQKRIQSCINFIVDKSN 1800 (1807)
Q Consensus 1770 ~e~~-------le~le~el~~L~~el~~l~~~I~~~~~ 1800 (1807)
++.. ++.++..+...+.++.....+|...++
T Consensus 87 ~e~~~~~~~~~~e~le~~la~KkAEleKtqa~Ld~aln 124 (125)
T 2pms_C 87 AEENNNVEDYFKEGLEKTIAAKKAELEKTEADLKKAVN 124 (125)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 491
>1sfc_A VAMP 2, protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=55.93 E-value=71 Score=30.28 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
..|..++.+|++++..+.++-+++-+--+.++.+..+.+.|..........-..++.+.
T Consensus 30 d~l~~vq~eldeVk~IM~~NI~kvLeRGEkLd~L~dkse~L~~~S~~F~k~A~kl~rkm 88 (96)
T 1sfc_A 30 RRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKY 88 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 492
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.45 E-value=1.7e+02 Score=29.23 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH
Q psy2547 1699 NLEKEVALAQKQASGLRSRYQETDNKLLSK--AESSGLKRARGQMLLNKASQLSVNTTAKLKQLNET-----EAMFNSQE 1771 (1807)
Q Consensus 1699 ~a~~~a~~ae~~l~el~~~l~~~~~~l~~~--~~~l~~~~~r~~~l~~~a~~l~~~~~~~~~~l~~L-----e~~i~~~e 1771 (1807)
++..-...+...+-.+...+..+++.+..+ .....++++++..+..+...+.+++...+++|.++ ...-....
T Consensus 11 ef~~l~~~is~~I~~In~~vs~l~r~v~~LGT~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~~~~~~~~~~~r~~k 90 (130)
T 2dnx_A 11 DFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQR 90 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2547 1772 SELTELSKNIAELQKRIQSCINFIVDKS 1799 (1807)
Q Consensus 1772 ~~le~le~el~~L~~el~~l~~~I~~~~ 1799 (1807)
-+.+.|..+....-++...+.+.+.++.
T Consensus 91 ~q~~KL~~dF~~~L~~FQ~~Qr~~aeke 118 (130)
T 2dnx_A 91 LQKERLMNDFSAALNNFQAVQRRVSEKE 118 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 493
>1nyh_A Regulatory protein SIR4; coiled-coil, transcription regulation, repressor, transcript repressor; 3.10A {Saccharomyces cerevisiae} SCOP: h.1.23.1
Probab=55.43 E-value=1.3e+02 Score=28.84 Aligned_cols=71 Identities=11% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1609 TKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSI 1679 (1807)
Q Consensus 1609 l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~l 1679 (1807)
+..-+.....+|++.+.++..+.+-|..+.+++..-+.+|..++..+.-.++-|+++..+|.+-..+|..+
T Consensus 82 VD~~LSk~~~aldekekqlavaneiirslsdevmrneiritslqgdltftkkclenarsqisekdakinkl 152 (166)
T 1nyh_A 82 VDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKL 152 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhheeeeeeccchhhHHHHHHHHHhhhhhhhHHHHHH
No 494
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=54.80 E-value=50 Score=41.56 Aligned_cols=185 Identities=9% Similarity=0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1445 AEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDHAASVRNKTAAYVASTSNI 1524 (1807)
Q Consensus 1445 ~eeL~~~~~~~~~~~~a~~~ae~a~~~l~~~~~~~~~l~~~~~~~~~~~~~a~~~A~~~~~~a~~~~~~~e~~~~~~~~l 1524 (1807)
+..|+++-...-.....+.++. -.+.+-.++++++.....+...+.++++-++.|.-+.+.|..+.+.++.. -
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~i~~~k~~~e~dLa~A~PaL~~A~~AL~~L~k~------d 76 (536)
T 3err_A 4 LKRLRQEPEVFHRAIREKGVAL-DLEALLAVDEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQ------H 76 (536)
T ss_dssp HHHHHSCHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHH------H
T ss_pred hHhhhcChHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------H
Q ss_pred HHHHHHHhhCCCCChHHHHHHhHHh--hhhccCCCHHHHHHHHHHHHHHHHhhhhHHHH------HHHHHH--------H
Q psy2547 1525 TKQLDEFLNAPGATLADIRNISGLA--VNKNIQSNPEQIRERANEINNVIKSLTDIDTI------LTETAG--------D 1588 (1807)
Q Consensus 1525 ~~~lk~~l~~~~~~~~~i~~la~~v--l~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~------l~~~~~--------~ 1588 (1807)
+.+|+ .....|..|+.+.+.| +--.-+.+=...+.+... .+.+..|.+.+.. +..++. .
T Consensus 77 i~Elk----s~~~PP~~V~~vmeaV~iLl~~~~~~W~~ak~~L~~-~~Fl~~L~~fdkd~I~~~~~~~l~~~y~~~p~F~ 151 (536)
T 3err_A 77 LVEVR----SMANPPAAVKLALESIALLLGESTTDWKQIRSIIMR-ENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYN 151 (536)
T ss_dssp HHHHH----TCSSCCHHHHHHHHHHHHHTTCSCCCHHHHTTGGGC-TTHHHHHHHCCGGGCCHHHHHHHHHHTTTSTTCS
T ss_pred HHHHH----hcCCCcHHHHHHHHHHHHHhCCCCCCHHHHhhccCc-HHHHHHHHhcCcccCCHHHHHHHHHHhcCCCCCC
Q ss_pred HHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1589 LAKANDLKRKANLTKA------GADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDI 1641 (1807)
Q Consensus 1589 l~~a~~L~~~a~~a~~------ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i 1641 (1807)
.+.++....-+.-+-. ....+.+++..+++++.+++..+..++++++++...|
T Consensus 152 ~e~v~~~S~Aa~~Lc~WV~A~~~Y~~l~~eV~pLk~eLk~lE~eL~e~e~eL~~lll~i 210 (536)
T 3err_A 152 YEIVNRASLAAGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQV 210 (536)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
No 495
>1pl5_A Regulatory protein SIR4; parallel coiled coil homodimer, DNA binding protein/transcription complex; 2.50A {Saccharomyces cerevisiae} SCOP: h.1.23.1
Probab=54.79 E-value=82 Score=29.49 Aligned_cols=89 Identities=16% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1610 KNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRS 1689 (1807)
Q Consensus 1610 ~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~ 1689 (1807)
++.+.-+..-|..+..++++.++++.-+.+-|+.+..++-.-+-.+..++..|.=+..-++..+.+|.+-..++..+.++
T Consensus 52 ~D~LSFVD~~LSk~~~aldekekqlavaneiirslsdevmrneiritslqgdltftkkclenarsqisekdakinklmek 131 (142)
T 1pl5_A 52 EDGLSFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKLMEK 131 (142)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred cCcchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHhhheeeeeeccchhhHHHHHHHHHhhhhhhhHHHHHHHHH
Q ss_pred HHHHHHHHH
Q psy2547 1690 AMDVENEEK 1698 (1807)
Q Consensus 1690 ~~~a~~~ae 1698 (1807)
--++..+++
T Consensus 132 dfqvnkeik 140 (142)
T 1pl5_A 132 DFQVNKEIK 140 (142)
T ss_dssp ---------
T ss_pred hhhcccccC
No 496
>1n7s_A Vesicle-associated membrane protein 2; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1kil_A 3rk2_A 3rk3_A 3rl0_A 3fii_B 3g94_B
Probab=54.79 E-value=99 Score=26.73 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1667 VKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKL 1725 (1807)
Q Consensus 1667 ~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l 1725 (1807)
..|..++.+|++++..+.++-+++-+--+.++.+..+.+.+..........-..+..+.
T Consensus 4 d~l~~v~~~l~ev~~iM~~NI~~vl~RGekLd~L~~ks~~L~~~s~~F~~~a~~l~r~m 62 (63)
T 1n7s_A 4 RRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKY 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 497
>3htk_B Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=54.75 E-value=77 Score=28.35 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1639 DDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQ 1708 (1807)
Q Consensus 1639 ~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae 1708 (1807)
..|+.++++|.+.......+-.++..+...+.+...++...+-.+-+.+.+...++.-...+..+.++++
T Consensus 4 ~ki~~~e~kI~~~~~~~~~~l~~~~~~~~~l~~~~~el~~~~i~~lE~~N~~~s~~~li~~~~~r~~elk 73 (73)
T 3htk_B 4 QKIKDIDDQIQQLLLKQRHLLSKMASSMKSLKNCQKELISTQILQFEAQNMDVSMNDVIGFFNEREADLK 73 (73)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHhHHHHHHHHHHHHHHhhC
No 498
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=54.71 E-value=91 Score=32.87 Aligned_cols=140 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1607 DSTKNTVQKIVDVLTEARTAQD-MAEVAIQTAKDDI-SAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFL 1684 (1807)
Q Consensus 1607 ~~l~~~l~~l~~~L~~a~~~~~-~a~~~l~~a~~~i-~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~ 1684 (1807)
..-.+-+++++..+.+.-.... .....+-..+..+ ..+++.-..+......++.....++.+...++..++.++.+..
T Consensus 8 ~~~~~~l~~Lq~~i~~l~~~~~~~~~e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~ 87 (174)
T 2p22_A 8 TNHHEMLQNLQTVVNELYREDVDYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRA 87 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy2547 1685 QNGR----------SAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKA 1746 (1807)
Q Consensus 1685 ~~~~----------~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a 1746 (1807)
.+++ .++++......+..++-++-.+-..+++.+-.+.+.+..-.-.++.-...+..|-.+.
T Consensus 88 k~~e~~~~~~~~~~diD~~v~~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g~I~ld~ylK~vR~LaReQ 159 (174)
T 2p22_A 88 KVQQFSSTSHVDDEDVNSIAVAKTDGLNQLYNLVAQDYALTDTIECLSRMLHRGTIPLDTFVKQGRELARQQ 159 (174)
T ss_dssp HHHHHTTSSCCCSSCGGGTEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCChhhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
No 499
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=54.69 E-value=44 Score=28.90 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1651 ITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETD 1722 (1807)
Q Consensus 1651 ie~~l~~~e~~l~~~e~~l~~l~~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~ 1722 (1807)
+-.+-+++..++..-..+|..|..-+..++.++..-.+.-..++.++..++..+..+++.+.+....++++.
T Consensus 1 lIkQNKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~~~d~~~~~~~~~ 72 (74)
T 2q6q_A 1 AVQQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSDANSTFKEMR 72 (74)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------
T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhccccchhhHhcc
No 500
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=54.56 E-value=1.1e+02 Score=26.59 Aligned_cols=61 Identities=15% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2547 1737 ARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVD 1797 (1807)
Q Consensus 1737 ~r~~~l~~~a~~l~~~~~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~ 1797 (1807)
.+...++..-.+...--..+...+.+|+.+.+.++.+-..+..+|..|..++..+...|..
T Consensus 2 kr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~~ 62 (63)
T 2wt7_A 2 KRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAA 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Done!