RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2547
(1807 letters)
>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 56
Score = 58.8 bits (142), Expect = 2e-11
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 976 CDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNAL-EQNCTEC 1028
C C++N D GNC+ LTG+CL+C Y+T G +C CK GFFGN L +C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 54.9 bits (132), Expect = 3e-10
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 867 CICNGHADL-----CDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917
C CN + D C+ TG C+ C +T G C+RC G++G+P P C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAP--NPADKC 54
Score = 49.9 bits (119), Expect = 2e-08
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 772 ECDCDPTGSTSKYCDQLGGNCV-CKPNVVGRRCDRCAPGTYGF--GPEGCKAC 821
+C+ + + C++L G C+ C N G CDRC G +G P C
Sbjct: 2 QCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 47.2 bits (112), Expect = 2e-07
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 462 CTCNIQGTINSQG-CNKDTGDCT-CKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514
C CN N+ G CN+ TG+C C N G C++C F+G + C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPN-PADKC 54
Score = 46.8 bits (111), Expect = 3e-07
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 9/61 (14%)
Query: 404 CDCDPGGSL-DDGICDPYTDDVLVSGKC-HCKPNVGGRRCDMCKDGFWNFNETNPNGCEP 461
C C+ G C+ T G+C C N G CD CK+GF+ N PN +
Sbjct: 1 CQCNDNIDPNAVGNCNRLT------GECLKCIYNTAGFYCDRCKEGFFG-NPLAPNPADK 53
Query: 462 C 462
C
Sbjct: 54 C 54
Score = 45.7 bits (108), Expect = 7e-07
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Query: 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEV 400
C CN++ + G C C +NT G C+RCK+ F+ +P P
Sbjct: 1 CQCNDNIDPNAVGNCNRLT------GECLKCIYNTAGFYCDRCKEGFFGNP----LAPNP 50
Query: 401 CLRC 404
+C
Sbjct: 51 ADKC 54
Score = 45.7 bits (108), Expect = 7e-07
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 1028 CTCNILGIDHSKGPCDRTTGQC-PCLPNVIGVSCDRCLKNHWKIA-SGTGCEPC 1079
C CN ++ G C+R TG+C C+ N G CDRC + + + + C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 44.5 bits (105), Expect = 2e-06
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 821 CDCNHVGALDNICDVVSGQC-KCRAQTYGRECDQCSPGYWNYPT----CQRC 867
C+ N C+ ++G+C KC T G CD+C G++ P +C
Sbjct: 3 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 44.1 bits (104), Expect = 3e-06
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 1128 CDCDPSGSATSQCHQNNGTCV-CHQGIGGVRCDTCARGYIGTAPDCSPCGEC 1178
C+ + +A C++ G C+ C G CD C G+ G +P +C
Sbjct: 3 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 43.0 bits (101), Expect = 6e-06
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 1079 CDCDPIGSV-DVTECNEYTGQC-QCKSGFGGRQCDQCQTNFWGNPNVE--CFPC 1128
C C+ V CN TG+C +C G CD+C+ F+GNP C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
Score = 33.0 bits (75), Expect = 0.024
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 12/65 (18%)
Query: 278 CSCYGHASRCLPISEADTKPDMVHGRC-ECTHNTQGLNCEKCIDFYNDLPWKPAFGSQTN 336
C C + + + + G C +C +NT G C++C + + P P N
Sbjct: 1 CQCNDNIDPNAVGN-----CNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAP------N 49
Query: 337 ACKQC 341
+C
Sbjct: 50 PADKC 54
Score = 31.8 bits (72), Expect = 0.054
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 944 CECKEGYRGTRCDGCLDNYFGNPQERGGSCEPC 976
+C G CD C + +FGNP + C
Sbjct: 23 LKCIYNTAGFYCDRCKEGFFGNPL-APNPADKC 54
Score = 30.6 bits (69), Expect = 0.15
Identities = 10/45 (22%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 514 CDCDPGASYDNNCDVISGQC-KCKPHASGRTCSTPEQSYYSPPYD 557
C+ + + NC+ ++G+C KC + +G C ++ ++ P
Sbjct: 3 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLA 47
>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 51
Score = 57.6 bits (139), Expect = 4e-11
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 821 CDCNHVGALDN--ICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRC 867
C CN G + C+ V+GQC+C GR+C C PGY+N + Q C
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGC 49
Score = 57.6 bits (139), Expect = 4e-11
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 404 CDCDPGGSL-DDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCE 460
C C+P G++ C+P T G+C C P+V GR C C G++N + GCE
Sbjct: 1 CACNPYGTVQQQSSCNPVT------GQCQCLPHVSGRDCGTCDPGYYNL--QSGQGCE 50
Score = 56.8 bits (137), Expect = 6e-11
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 773 CDCDPTGSTSK--YCDQLGGNCVCKPNVVGRRCDRCAPGTYGFG-PEGCK 819
C C+P G+ + C+ + G C C P+V GR C C PG Y +GC+
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCE 50
Score = 56.8 bits (137), Expect = 7e-11
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 1028 CTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCE 1077
C CN G + C+ TGQC CLP+V G C C ++ + SG GCE
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCE 50
Score = 56.0 bits (135), Expect = 1e-10
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 1079 CDCDPIGSV-DVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCD 1129
C C+P G+V + CN TGQCQC GR C C ++ + C+
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQS--GQGCE 50
Score = 51.8 bits (124), Expect = 3e-09
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 462 CTCNIQGTINSQG-CNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCK 512
C CN GT+ Q CN TG C C +V GRDC C P ++ L + GC+
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQ--GCE 50
Score = 44.9 bits (106), Expect = 1e-06
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 1128 CDCDPSGSATSQ--CHQNNGTCVCHQGIGGVRCDTCARGYIGTAPDCSPC 1175
C C+P G+ Q C+ G C C + G C TC GY C
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNL-QSGQGC 49
Score = 44.1 bits (104), Expect = 2e-06
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 976 CDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNC 1025
C C+ + +C+ +TG+C QC G C C G++ Q C
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQC-QCLPHVSGRDCGTCDPGYYNLQSGQGC 49
Score = 40.6 bits (95), Expect = 4e-05
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 514 CDCDPGASYDN--NCDVISGQCKCKPHASGRTCSTPEQSYY 552
C C+P + +C+ ++GQC+C PH SGR C T + YY
Sbjct: 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYY 41
Score = 37.9 bits (88), Expect = 3e-04
Identities = 13/54 (24%), Positives = 16/54 (29%), Gaps = 7/54 (12%)
Query: 864 CQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917
C C+ TG C C G +C C GYY + C
Sbjct: 3 CNPYGTVQQQSSCNPVTGQCQ-CLPHVSGRDCGTCDPGYYNLQ------SGQGC 49
Score = 32.2 bits (73), Expect = 0.033
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 944 CECKEGYRGTRCDGCLDNYFGNPQERG 970
C+C G C C Y+ +G
Sbjct: 22 CQCLPHVSGRDCGTCDPGYYNLQSGQG 48
Score = 28.3 bits (63), Expect = 0.81
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 298 DMVHGRCECTHNTQGLNCEKCIDFYNDLP 326
+ V G+C+C + G +C C Y +L
Sbjct: 16 NPVTGQCQCLPHVSGRDCGTCDPGYYNLQ 44
Score = 27.5 bits (61), Expect = 1.8
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPN 392
C CN + T S+ G C C + GR+C C +Y +
Sbjct: 1 CACNPYGTVQQ------QSSCNPVTGQC-QCLPHVSGRDCGTCDPGYYNLQS 45
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 52.6 bits (126), Expect = 3e-09
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 917 CPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPC 976
CPCPG + + + V C G G RC+ C D YFG+P G C
Sbjct: 1 CPCPGG-------SSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 49.5 bits (118), Expect = 3e-08
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 867 CICNGHADLC---DSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917
C C G + +K C C T G+ CE C +GY+GDP LG + P R C
Sbjct: 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDP-LGSNGPVRLC 53
Score = 48.8 bits (116), Expect = 6e-08
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 8/61 (13%)
Query: 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEV 400
C C S+ + VC C T G+ CE C ++ DP +
Sbjct: 1 CPCPGGSSCAIVPKT--------KEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRL 52
Query: 401 C 401
C
Sbjct: 53 C 53
Score = 35.3 bits (81), Expect = 0.003
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 976 CDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQN--CTEC 1028
C C + A+ T C C T G C++C G+FG+ L N C
Sbjct: 1 CPCPGGSSCAI--VPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 34.5 bits (79), Expect = 0.007
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 404 CDCDPGGSLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPC 462
C C G S P T +V+ HC G+RC++C DG++ + C
Sbjct: 1 CPCPGGSS---CAIVPKTKEVVC---THCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 33.7 bits (77), Expect = 0.012
Identities = 15/53 (28%), Positives = 17/53 (32%), Gaps = 8/53 (15%)
Query: 278 CSCYGHASRCLPISEADTKPDMVHGRC-ECTHNTQGLNCEKCIDFYNDLPWKP 329
C C G +S + P C C T G CE C D Y P
Sbjct: 1 CPCPGGSSCAI-------VPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGS 46
Score = 33.7 bits (77), Expect = 0.013
Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 821 CDCNHVGALDNICDVVSGQC-KCRAQTYGRECDQCSPGYWNYPTCQRCICN 870
C C + + C C T G+ C+ C GY+ P
Sbjct: 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVR 51
Score = 33.3 bits (76), Expect = 0.016
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 1079 CDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPC-DCDP 1132
C C S + + C +G G++C+ C ++G+P P C P
Sbjct: 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRP 55
Score = 33.3 bits (76), Expect = 0.017
Identities = 9/53 (16%), Positives = 15/53 (28%)
Query: 462 CTCNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPC 514
C C + K+ C G+ C C ++G + C
Sbjct: 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 33.0 bits (75), Expect = 0.024
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 773 CDCDPTGSTSKYCDQLGGNCV-CKPNVVGRRCDRCAPGTYG---FGPEGCKAC 821
C C S + C C G+RC+ C G +G + C
Sbjct: 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 28.7 bits (64), Expect = 0.79
Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 9/55 (16%)
Query: 1128 CDCDPSGSATSQCHQNNGTCV---CHQGIGGVRCDTCARGYIG----TAPDCSPC 1175
C C G ++ V C G G RC+ C GY G + C
Sbjct: 1 CPCP--GGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLC 53
Score = 27.6 bits (61), Expect = 1.9
Identities = 11/59 (18%), Positives = 16/59 (27%), Gaps = 7/59 (11%)
Query: 1028 CTCNILGIDHSKGPCDRTTGQ---CPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDP 1083
C C S T + C G C+ C ++ G+ C P
Sbjct: 1 CPCP----GGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRP 55
>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {Desulfovibrio
vulgaris [TaxId: 881]}
Length = 505
Score = 48.6 bits (113), Expect = 5e-06
Identities = 48/392 (12%), Positives = 88/392 (22%), Gaps = 25/392 (6%)
Query: 800 GRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYW 859
R A G + C AC + A + + + CRA + D+
Sbjct: 121 YRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDT 180
Query: 860 NYP----TCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCR 915
+C + A+ C + + G P + +P
Sbjct: 181 AAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVP 240
Query: 916 PCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEP 975
P ++ + ++ C R C C + +
Sbjct: 241 GKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKA 300
Query: 976 CDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGI 1035
++ + + + C C + C C G
Sbjct: 301 MHQPDSMRSCVGCHNTR-----------VQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGF 349
Query: 1036 DHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEY 1095
D K + + K P + +E+
Sbjct: 350 DA-KQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEF 408
Query: 1096 TGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATS----QCHQNN-----GT 1146
+ K+ G D+ F C C + S T CH G
Sbjct: 409 PHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGD 468
Query: 1147 CVCHQGIGGVRCDTCARGYIGTAPDCSPCGEC 1178
+ +C C P + C +C
Sbjct: 469 RPGLKAAYHQQCMGCHDRMKIEKPANTACVDC 500
Score = 42.5 bits (97), Expect = 4e-04
Identities = 44/401 (10%), Positives = 79/401 (19%), Gaps = 22/401 (5%)
Query: 754 ACKKQHYSIGMYVHHGANECDC----DPTGSTSKYCDQLGGNCVCKPNVVGRRCDRCAPG 809
+ +H + G + +C SK G + P
Sbjct: 118 SLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPA 177
Query: 810 TYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCIC 869
C +C + V C + + P I
Sbjct: 178 LDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALIL 237
Query: 870 NGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSY 929
D+ + + C C
Sbjct: 238 PVPG--KDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFV 295
Query: 930 ADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGN 989
+ C R + + F P + C C + A
Sbjct: 296 QLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVE 355
Query: 990 CDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQC 1049
L + R L + +K
Sbjct: 356 AGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGS----IAKEYQPSEFPHR 411
Query: 1050 PCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQ 1109
+ +I + L + I GT C+ C + S+ +C C K
Sbjct: 412 KIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCA----SCHGKP---FDA 464
Query: 1110 CDQCQTNFWGNPNVECFPCD-----CDPSGSATSQCHQNNG 1145
+ + +C C P+ +A CH+
Sbjct: 465 DRGDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKERA 505
Score = 34.4 bits (76), Expect = 0.13
Identities = 29/378 (7%), Positives = 63/378 (16%), Gaps = 14/378 (3%)
Query: 807 APGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQR 866
A G C++C A + ++ + + N C
Sbjct: 85 AGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHH 144
Query: 867 CI-----CNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPG 921
+ C + + + + +
Sbjct: 145 VYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVN 204
Query: 922 TVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNN 981
A R + + D
Sbjct: 205 CAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEA 264
Query: 982 TDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDHSKGP 1041
C C + + + + + C+ +
Sbjct: 265 KANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCH----NTRVQQ 320
Query: 1042 CDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQC 1101
P C C E + + ++ +
Sbjct: 321 PTCAGCHGFIKPTKSDAQCGVC-HVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARP 379
Query: 1102 KSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCV--CHQGIGGVRCD 1159
+ D + G+ E P + + + G C
Sbjct: 380 QPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQ 439
Query: 1160 TCARG--YIGTAPDCSPC 1175
C T P C+ C
Sbjct: 440 GCHHNSPASLTPPKCASC 457
Score = 32.8 bits (72), Expect = 0.44
Identities = 24/267 (8%), Positives = 52/267 (19%), Gaps = 13/267 (4%)
Query: 275 RGSCSCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQ 334
R P + E + + + + +
Sbjct: 217 FKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVR 276
Query: 335 TNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKE 394
+ C C+ N + F + S C C ++ K
Sbjct: 277 IDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCH----NTRVQQPTCAGCHGFIKP 332
Query: 395 FSDPEVCLRCDCDPGGSLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWNFN-- 452
C C G + ++ + ++ R N
Sbjct: 333 TKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPE 392
Query: 453 ----ETNPNGCEPCTCNIQGTINSQGCNKDTGDC-TCKRNVEGRDCNQCLPHFWGLSESE 507
+ +P + + + +G C C H +
Sbjct: 393 KVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGC--HHNSPASLT 450
Query: 508 EYGCKPCDCDPGASYDNNCDVISGQCK 534
C C P + + +
Sbjct: 451 PPKCASCHGKPFDADRGDRPGLKAAYH 477
Score = 29.0 bits (62), Expect = 5.9
Identities = 26/289 (8%), Positives = 52/289 (17%), Gaps = 5/289 (1%)
Query: 289 PISEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQTNACKQCNCNNHST 348
+++A K G C HN + + D + + +
Sbjct: 81 DLAKAGKKTGPQDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCG 140
Query: 349 KCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDP 408
CH + DSC + ++ S + +
Sbjct: 141 ACHHVYDEASKKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAET 200
Query: 409 GGSLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMC----KDGFWNFNETNPNGCEPCTC 464
G G P + + + G + +
Sbjct: 201 GPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHK 260
Query: 465 NIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPCDCDPGASYDN 524
+ N TC + + + C +
Sbjct: 261 AHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCV-GCHNTRVQ 319
Query: 525 NCDVISGQCKCKPHASGRTCSTPEQSYYSPPYDNFLYEAENANCKTDKC 573
KP S C + A +
Sbjct: 320 QPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRS 368
Score = 29.0 bits (62), Expect = 6.0
Identities = 35/322 (10%), Positives = 64/322 (19%), Gaps = 27/322 (8%)
Query: 279 SCYGHASRCLPISEADTKPDMVHGRCECTHN-----TQGLNCEKCIDFYNDLPWKPAFGS 333
SC+ + +H R + NC C Y++ K +G
Sbjct: 98 SCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASKKLVWGK 157
Query: 334 QT-NACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPN 392
++C+ C+ K + ++ + T NC C +
Sbjct: 158 NKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAPEAQAKF 217
Query: 393 KE----------FSDPEVCLRCDCDPG----GSLDDGICDPYTDDVLVSGKCHCKPNVGG 438
K D + L + + + C +V
Sbjct: 218 KVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAKANDCRTCHHVRI 277
Query: 439 RRCDMCKD-------GFWNFNETNPNGCEPCTCNIQGTINSQGCNKDTGDCTCKRNVEGR 491
C C F + +C Q K
Sbjct: 278 DTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDA 337
Query: 492 DCNQCLPHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSY 551
C C G + + ++S + + K
Sbjct: 338 QCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIG 397
Query: 552 YSPPYDNFLYEAENANCKTDKC 573
KT
Sbjct: 398 SIAKEYQPSEFPHRKIVKTLIA 419
>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]}
Length = 166
Score = 44.9 bits (106), Expect = 2e-05
Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 22/172 (12%)
Query: 1559 EQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVD 1618
E++ + A E + T D KA K G+DS +
Sbjct: 10 EEMEKHAKEFQKTFSEQFNSLVNSKNTQ-DFNKA---------LKDGSDSVLQQLSAFSS 59
Query: 1619 VLTEART-AQDMAEVAIQTAKDDISAARKDLSQ----ITNDLDDA-QQKSNETNVKVKLL 1672
L A + A A+ A++ A+ ++ ++L + + + + + V+
Sbjct: 60 SLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQES 119
Query: 1673 QERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNK 1724
Q+ K + + + + + + K + K A ++ + E K
Sbjct: 120 QKLAKEVASNMEETNKK---LAPKIKQAYDDFV---KHAEEVQKKLHEAATK 165
Score = 27.6 bits (61), Expect = 8.9
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 13/158 (8%)
Query: 1431 AETSKKLINEKESKAEELRKHMIILSESNSA---KDYAETSKKLINEKEAKAEEVFRGIT 1487
A E E A+E +K + NS K+ + +K L + ++ +++ +
Sbjct: 2 APAGGNAFEEMEKHAKEFQKT--FSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSS 59
Query: 1488 TAKQESHAANILAKEAYDHAASVRNKTAAYVASTS-NITKQLDEF---LNAPGATLA--- 1540
+ + AN AKEA + A KTA + ++ K+ + F L A T
Sbjct: 60 SLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQES 119
Query: 1541 -DIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTD 1577
+ + + + +I++ ++ + +
Sbjct: 120 QKLAKEVASNMEETNKKLAPKIKQAYDDFVKHAEEVQK 157
>d1r8ia_ a.8.7.1 (A:) Typo IV secretion system protein TraC
{Escherichia coli [TaxId: 562]}
Length = 187
Score = 43.0 bits (101), Expect = 8e-05
Identities = 23/176 (13%), Positives = 63/176 (35%), Gaps = 23/176 (13%)
Query: 1623 ARTAQDMAEVA--IQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQ 1680
+ + + ++A ++ K + + + + TN L + K +
Sbjct: 4 IKQGEQLEQMAQQLEQLKSQLETQKNMYESMAKTTNLGDLLGTSTNTLANNLPDNWKEVY 63
Query: 1681 AGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQET-DNKLLSKAESSGLKRARG 1739
+ + + S + + ++ D+ S+A + K+
Sbjct: 64 SDAMNSSSSVTP-----------------SVNSMMGQFNAEVDDMTPSEAIAYMNKKLAE 106
Query: 1740 QMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFI 1795
+ ++ ++L++ +A+ +++ + T K+IA+LQ RIQ+ I
Sbjct: 107 KGAYDRVMAEKAYNNQM-QELSDMQAL--TEQIKSTPDLKSIADLQARIQTSQGAI 159
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 196
Score = 38.6 bits (89), Expect = 0.003
Identities = 16/159 (10%), Positives = 43/159 (27%), Gaps = 8/159 (5%)
Query: 1434 SKKLINEKESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEE------VFRGIT 1487
+ L E +A LR + A D K I +
Sbjct: 33 KRLLTEVNEEQASHLRHSLDNFV--AQATDLQFKLKNEIKSAQRDGIHDTNKQAQAENSR 90
Query: 1488 TAKQESHAANILAKEAYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNISG 1547
+ + Y + K + +++ ++ G + +
Sbjct: 91 QRFLKLIQDYRIVDSNYKEENKEQAKRQYMIIQPEATEDEVEAAISDVGGQQIFSQALLN 150
Query: 1548 LAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETA 1586
++ +++ R E+ + KS+ ++ + +
Sbjct: 151 ANRRGEAKTALAEVQARHQELLKLEKSMAELTQLFNDME 189
Score = 38.2 bits (88), Expect = 0.004
Identities = 23/178 (12%), Positives = 60/178 (33%), Gaps = 13/178 (7%)
Query: 1229 LVENTTRSSHDLTVMLTTIDDMKKQIMNNEDPNGVGKT---LGNTTQRINLARLALNDLT 1285
+ R + +D + K+++ + L N + + L +
Sbjct: 10 KISQINRDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEI 69
Query: 1286 EEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQSTETEKQIN----DA 1341
+ ++ + A ++ ++ + + + KEQ+ I +
Sbjct: 70 KSAQRDGIHDTNKQAQAENSRQRFLKLIQDYRIVDSNYKEENKEQAKRQYMIIQPEATED 129
Query: 1342 ERQCKRTENLVTKTFPQF---TQGQEENEKALQRLNEK---ITSLEKNLPDLNELICD 1393
E + ++ + F Q + E + AL + + + LEK++ +L +L D
Sbjct: 130 EVEAAISDVGGQQIFSQALLNANRRGEAKTALAEVQARHQELLKLEKSMAELTQLFND 187
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943)
{Staphylococcus aureus [TaxId: 1280]}
Length = 185
Score = 37.4 bits (85), Expect = 0.006
Identities = 21/178 (11%), Positives = 65/178 (36%), Gaps = 1/178 (0%)
Query: 1211 AYTKEFELLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQIMNNEDPNGVGKTLGNT 1270
AY K+ + ++ E +K + + + ++ K + + + K +
Sbjct: 9 AYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNS-KDTAVRGKAVKDLIKNADDR 67
Query: 1271 TQRINLARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQ 1330
+ A+ ++ KK + + + + ++ L+ + H K ++
Sbjct: 68 LKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKK 127
Query: 1331 STETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKNLPDLN 1388
+ +EK + Q T+ V + Q ++ ++ + + + ++K D++
Sbjct: 128 AVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKEKQDVD 185
Score = 37.0 bits (84), Expect = 0.011
Identities = 22/172 (12%), Positives = 59/172 (34%), Gaps = 8/172 (4%)
Query: 1220 EKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQIMNNEDPNGVGKTLGNTTQRINLARL 1279
+K+I+ V+ + + I ++ ++ + ++ +
Sbjct: 4 KKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDV--------NSKDTAVRGK 55
Query: 1280 ALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQSTETEKQIN 1339
A+ DL + K E ++ +++ + + +D K +Q + K+
Sbjct: 56 AVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKY 115
Query: 1340 DAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKNLPDLNELI 1391
+ + + +N+ Q +NEK ++E+N L E+
Sbjct: 116 KLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVS 167
Score = 29.3 bits (64), Expect = 2.9
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 11/162 (6%)
Query: 1551 NKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTK------- 1603
+ I++ ++I E + + + + DT + A N R K
Sbjct: 21 EEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKK 80
Query: 1604 --AGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQK 1661
K+ V I + + Q ++ S K + N +
Sbjct: 81 SEQDFKKAKSHVDNIDNDVKRKEVKQLDDV--LKEKYKLHSDYAKAYKKAVNSEKTLFKY 138
Query: 1662 SNETNVKVKLLQERLKSIQAGFLQNGRSAMDVENEEKNLEKE 1703
N+ + + + E+ K+I+ + + + ++KE
Sbjct: 139 LNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKE 180
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 300
Score = 38.2 bits (88), Expect = 0.008
Identities = 23/168 (13%), Positives = 59/168 (35%), Gaps = 3/168 (1%)
Query: 1624 RTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGF 1683
++ + I + + L + + +K + ++ + +S+
Sbjct: 133 SPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAI 192
Query: 1684 LQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLL--SKAESSGLKRARGQM 1741
LQ ++ + E E + + AQ A L ++ + + ++ LK+ +M
Sbjct: 193 LQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKM 252
Query: 1742 LLNKASQLSVNTTAKLKQLNETEAMFNSQ-ESELTELSKNIAELQKRI 1788
++ L +L E E + + E + I +LQ ++
Sbjct: 253 ENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 300
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 181
Score = 36.8 bits (85), Expect = 0.010
Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 27/182 (14%)
Query: 1219 LEKKIEDVKALV---ENTTRSSHDLTVMLTTIDDMKK---QIMNNEDPNGVGKTLGNTTQ 1272
L+ K+ +VK V E+ +S DL D K Q +E
Sbjct: 7 LDSKVRNVKDKVMCIEHEIKSLEDLQDEY----DFKCKTLQNREHETNGVAKSDQKQEQL 62
Query: 1273 RINLARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQA---------HDT 1323
+ L L++ +E+ ++K E+L L Q + L ++ +
Sbjct: 63 LLKKMYLMLDNKRKEV--VHKIIELLNV-TELTQNALINDELVEWKRRQQSACIGGPPNA 119
Query: 1324 SLK-LKEQSTETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEK 1382
L L+ T + + +Q K+ E L K +T + K Q L ++ SL +
Sbjct: 120 CLDQLQNWFTIVAESLQQVRQQLKKLEELEQK----YTYEHDPITKNKQVLWDRTFSLFQ 175
Query: 1383 NL 1384
L
Sbjct: 176 QL 177
>d1ofwa_ a.138.1.1 (A:) Nine-heme cytochrome c {Desulfovibrio
desulfuricans, ATCC 27774 [TaxId: 876]}
Length = 293
Score = 36.4 bits (82), Expect = 0.024
Identities = 13/191 (6%), Positives = 35/191 (18%), Gaps = 4/191 (2%)
Query: 365 GGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDV 424
C++C H + +C C K + + + + +
Sbjct: 44 IDNCETCHHTGDPVSCSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSCHEQ 103
Query: 425 LVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTINSQGCN---KDTGD 481
+ C + P +
Sbjct: 104 QTKERRECAGCHAIVTPKRDEAWC-ATCHNITPSMTPEQMQKGINGTLLPGDNEALAAET 162
Query: 482 CTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASG 541
++ VE + +++Y + + +
Sbjct: 163 VLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLMERIKDDKLAQAFHNKPE 222
Query: 542 RTCSTPEQSYY 552
C+T
Sbjct: 223 ILCATCHHRSP 233
Score = 36.4 bits (82), Expect = 0.024
Identities = 19/193 (9%), Positives = 31/193 (16%), Gaps = 2/193 (1%)
Query: 992 TLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTC-NILGIDHSKGPCDRTTGQCP 1050
C C + + C C + +KG + C
Sbjct: 42 KKIDNCETCHHTGDPVSCSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSCH 101
Query: 1051 CLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQC 1110
C C C C S+ + +
Sbjct: 102 EQQTKERRECAGCHAIVTPKRDEAWCATCHNIT-PSMTPEQMQKGINGTLLPGDNEALAA 160
Query: 1111 DQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTCARGYIGTAP 1170
+ P + + +N T H R
Sbjct: 161 ETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLMERIKDDKLAQAFHNK 220
Query: 1171 DCSPCGECFDNWD 1183
C C
Sbjct: 221 PEILCATCHHRSP 233
Score = 36.0 bits (81), Expect = 0.034
Identities = 29/283 (10%), Positives = 50/283 (17%), Gaps = 38/283 (13%)
Query: 879 KTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPR 938
K C +C ++ D +C C + G R +
Sbjct: 43 KIDNCETCHHTGDPVSCSTC-HTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVS----- 96
Query: 939 SQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCL 998
C C + +E G + C T
Sbjct: 97 ----------------CVSCHEQQTKERRECAGCHAIVTPKRDEA-----WCATCHNITP 135
Query: 999 QCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGV 1058
+ AL + + P
Sbjct: 136 SMTPEQMQKGINGTLLPGDNEALAAETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNF 195
Query: 1059 SCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFW 1118
+ R L + + + + T + +C C T
Sbjct: 196 THRRHLTSLMERIKDDKLAQAFHNKPEILCATCHHR------SPLSLTPPKCGSCHTK-E 248
Query: 1119 GNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTC 1161
+ P CH+ C TC
Sbjct: 249 IDKANPGRPNLMAAYHLQCMGCHKGMDVA----RPRDTDCTTC 287
Score = 34.5 bits (77), Expect = 0.11
Identities = 24/231 (10%), Positives = 36/231 (15%), Gaps = 11/231 (4%)
Query: 946 CKEGYRGTRCDGCLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTE 1005
C C C +N A + + E
Sbjct: 50 CHHTGDPVSCSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSC--HEQQTKE 107
Query: 1006 GDHCQVCKAGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLK 1065
C C A E C C + + P + K
Sbjct: 108 RRECAGCHAIVTPKRDEAWCATCHNITPSMTPEQMQKGINGTLLPGDNEALAAETVLAQK 167
Query: 1066 NHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQC-KSGFGGRQCDQCQTNFWGNPNVE 1124
++ D + + + Q N
Sbjct: 168 TVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLMERIKDDKLAQAFHNKPEILCAT 227
Query: 1125 CFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTCARGYIGTAPDCSPC 1175
C P +C CH C C
Sbjct: 228 C--HHRSPLSLTPPKCGS------CHTKEIDKANPGRPNLMAAYHLQCMGC 270
Score = 31.8 bits (70), Expect = 0.80
Identities = 12/168 (7%), Positives = 26/168 (15%), Gaps = 5/168 (2%)
Query: 755 CKKQHYSIGMYVHHGANECDCDPTGSTSKYCDQLGGNC-----VCKPNVVGRRCDRCAPG 809
+ H + G C + C + C P
Sbjct: 77 DRAMHATNIAKRAKGNTPVSCVSCHEQQTKERRECAGCHAIVTPKRDEAWCATCHNITPS 136
Query: 810 TYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCIC 869
+ + V Q + +
Sbjct: 137 MTPEQMQKGINGTLLPGDNEALAAETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFT 196
Query: 870 NGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917
+ + + + C ++ P C C
Sbjct: 197 HRRHLTSLMERIKDDKLAQAFHNKPEILCATCHHRSPLSLTPPKCGSC 244
Score = 31.4 bits (69), Expect = 0.92
Identities = 20/146 (13%), Positives = 30/146 (20%), Gaps = 5/146 (3%)
Query: 301 HGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNST 360
+ + L E + P P + + +
Sbjct: 146 INGTLLPGDNEALAAETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLM 205
Query: 361 GRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPY 420
RI HN C C + P C C + G +
Sbjct: 206 ERIKDDKLAQAFHNKPEILCATCHH-----RSPLSLTPPKCGSCHTKEIDKANPGRPNLM 260
Query: 421 TDDVLVSGKCHCKPNVGGRRCDMCKD 446
L CH +V R C
Sbjct: 261 AAYHLQCMGCHKGMDVARPRDTDCTT 286
Score = 30.6 bits (67), Expect = 1.6
Identities = 28/236 (11%), Positives = 53/236 (22%), Gaps = 16/236 (6%)
Query: 306 CTHNTQGLNCEKCID---------------FYNDLPWKPAFGSQTNACKQCNCNNHSTKC 350
C H ++C C + K A G+ +C C+ +
Sbjct: 50 CHHTGDPVSCSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSCHEQQTKERR 109
Query: 351 HFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGG 410
T + C +C + T E+ ++ ++
Sbjct: 110 ECAGCHAIVTPKRDEAWCATCHNITPSMTPEQMQKGINGTLLPGDNEALAAETVLAQKTV 169
Query: 411 SLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTI 470
+ PY + + N RR ++
Sbjct: 170 EPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLMERIKDDKLAQAFHNKPEILCATCH 229
Query: 471 NSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPCDCDPGASYDNNC 526
+ + C E N P+ + GC D D +C
Sbjct: 230 HRSPLSLTPPKCGSCHTKEIDKANPGRPNLMAAYHLQCMGCHK-GMDVARPRDTDC 284
>d2ixha1 b.82.1.1 (A:1-184) dTDP-4-dehydrorhamnose 3,5-epimerase
RmlC {Pseudomonas aeruginosa [TaxId: 287]}
Length = 184
Score = 35.1 bits (80), Expect = 0.036
Identities = 22/138 (15%), Positives = 36/138 (26%), Gaps = 9/138 (6%)
Query: 782 SKYCDQLGGNCVCKPNVVGRRCDRCAPGTYGFGPEG-CKACDCNHVGALDNICDVVSGQC 840
+ + G + R G + + K D D
Sbjct: 36 RAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVD-----L 90
Query: 841 KCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCIN 900
+ + T+G+ N H + S+ + ERCI
Sbjct: 91 RRGSPTFGQ-WVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIV 149
Query: 901 GYYGDPRLGIDIPCRPCP 918
+ DP L ID P + P
Sbjct: 150 --WNDPELKIDWPLQDAP 165
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 31.7 bits (72), Expect = 0.085
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 1328 KEQSTETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLE 1381
KEQ + + + A+ K ++ TK E +KA+QRL E++ LE
Sbjct: 15 KEQLADARRDLKSAKADAKVMKDAKTKKV------VESKKKAVQRLEEQLMKLE 62
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 107
Score = 32.4 bits (74), Expect = 0.11
Identities = 15/110 (13%), Positives = 39/110 (35%), Gaps = 20/110 (18%)
Query: 1265 KTLGNTTQRINLARLALNDLT---EEIKKLNKTGEMLKENATLLQENNVEGALELTRQAH 1321
+ + + + +N+ EE+ + E+ K + +L + E
Sbjct: 15 QQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTE------ 68
Query: 1322 DTSLKLKEQSTETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQ 1371
+L+E+ + + ERQ +R + + Q ++A++
Sbjct: 69 ----ELQEKLETLQLREKTIERQEERVMK-------KLQEMQVNIQEAMK 107
>d1l8wa_ a.154.1.1 (A:) Variable surface antigen VlsE {Lyme disease
spirochete (Borrelia burgdorferi) [TaxId: 139]}
Length = 291
Score = 34.4 bits (79), Expect = 0.11
Identities = 41/237 (17%), Positives = 81/237 (34%), Gaps = 34/237 (14%)
Query: 1428 KDYAETSKKLINEKESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGIT 1487
K Y T + + ++ L K +S + D + + + E+ +
Sbjct: 20 KTYFTTVAAKLEKTKTDLNSLPKEKSDISSTTGKPDSTGSVGTAVEGAIKEVSELLDKLV 79
Query: 1488 TAKQESHAANILAKEAYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNISG 1547
A + A+ A A++ A +A A +AD ++ G
Sbjct: 80 KAVKT-------AEGASSGTAAIGEVVA-----------------DADAAKVADKASVKG 115
Query: 1548 LAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKAN---LTKA 1604
+A K I+ +I E A + +K++ + AG L + +KA
Sbjct: 116 IA--KGIK----EIVE-AAGGSEKLKAVAAAKGENNKGAGKLFGKAGAAAHGDSEAASKA 168
Query: 1605 GADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQK 1661
+ + ++I+ + A A + + AK+ I+AA D D +K
Sbjct: 169 AGAVSAVSGEQILSAIVTAADAAEQDGKKPEEAKNPIAAAIGDKDGGAEFGQDEMKK 225
>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 186
Score = 33.3 bits (76), Expect = 0.14
Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 23/181 (12%)
Query: 1219 LEKKIEDVKALVENTTRSSHDLTVMLTTIDDM---KKQIMNNEDPNGV-GKTLGNTTQRI 1274
LE+ ++DV+ V++ + V+ DD K + + D + G T Q++
Sbjct: 9 LEQHLQDVRKRVQDL---EQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKM 65
Query: 1275 NLARLALNDLTEEIKK-LNKTGEMLKENATLLQENNVEGALELTRQ---------AHDTS 1324
L L + + +++ +L +Q+ + L ++ +
Sbjct: 66 QQLEQMLTALDQMRRSIVSELAGLLSA-MEYVQKTLTDEELADWKRRQQIACIGGPPNIC 124
Query: 1325 LK-LKEQSTETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKN 1383
L L+ T + +Q K+ E L K + + + L E+I L +N
Sbjct: 125 LDRLENWITSLAESQLQTRQQIKKLEELQQK----VSYKGDPIVQHRPMLEERIVELFRN 180
Query: 1384 L 1384
L
Sbjct: 181 L 181
>g1avo.1 a.24.8.1 (A:,B:) Proteasome activator reg(alpha) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 200
Score = 32.8 bits (75), Expect = 0.23
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 11/75 (14%)
Query: 1328 KEQSTETEKQIND-AERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKNLPD 1386
E + +++ E C +TENL+ FP+ K + L+ + N +
Sbjct: 1 LRVQPEAQAKVDVFREDLCTKTENLLGSYFPK---------KISE-LDAFLKEPALNEAN 50
Query: 1387 LNELICDKRGDPCDN 1401
L+ L N
Sbjct: 51 LSNLKAPLDIAVNCN 65
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 33.3 bits (75), Expect = 0.29
Identities = 20/208 (9%), Positives = 43/208 (20%), Gaps = 6/208 (2%)
Query: 259 RQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHNTQGLNCEKC 318
+ Y + Q + + YG + + A D+V G G+ +
Sbjct: 63 NTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFG----QAREAGVLMYRD 118
Query: 319 IDFYNDLPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGR 378
+ S +Q + + HF +I V +
Sbjct: 119 YPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANA 178
Query: 379 NCERCKQYFYKDPNKEFSDPEVCL--RCDCDPGGSLDDGICDPYTDDVLVSGKCHCKPNV 436
N + ++ + +C + T
Sbjct: 179 NRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARG 238
Query: 437 GGRRCDMCKDGFWNFNETNPNGCEPCTC 464
G + + E
Sbjct: 239 PGYGIMSIRVDGNDVFAVYNATKEARRR 266
>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella
pneumoniae [TaxId: 573]}
Length = 120
Score = 31.5 bits (70), Expect = 0.29
Identities = 13/99 (13%), Positives = 21/99 (21%), Gaps = 2/99 (2%)
Query: 316 EKCIDFYNDLPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNT 375
+ FY L + F Q H S + D E
Sbjct: 14 DSTAAFYERLGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYR 73
Query: 376 EGRNCERCKQYFYKDPNKEFSDPEVCLRCDC--DPGGSL 412
+ ++ + DP G+L
Sbjct: 74 QCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 112
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 32.4 bits (73), Expect = 0.37
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 20/184 (10%)
Query: 1212 YTKEFELLEKKIEDVKALVENTTR-------SSHDLTVMLTTIDDMKKQIMNNEDPNGVG 1264
+F+ +E+K++ V + L+ I+ M K + P
Sbjct: 19 LDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYP- 77
Query: 1265 KTLGNTTQRINLARLALNDLTEEIKKLNKTGEMLKENATLLQ------ENNVEGALE--L 1316
+ + + L D L + GE ++E + + + N L+
Sbjct: 78 QAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLH 137
Query: 1317 TRQAHDTSLKLKEQSTETEKQINDAE----RQCKRTENLVTKTFPQFTQGQEENEKALQR 1372
+ + L+ + E + D + RQ K + + + +F + +E E ++
Sbjct: 138 DKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFN 197
Query: 1373 LNEK 1376
L E
Sbjct: 198 LLEM 201
>d1x75a1 e.11.1.1 (A:363-494) DNA Gyrase A {Escherichia coli [TaxId:
562]}
Length = 132
Score = 31.2 bits (70), Expect = 0.47
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 15/131 (11%)
Query: 1215 EFELLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQIMNNEDPNGVGKTLGNTTQRI 1274
FEL +K D ++E L V L ID + + I + P L ++
Sbjct: 5 IFEL--RKARDRAHILEA-------LAVALANIDPIIELIRHAPTPAEAKTALVANPWQL 55
Query: 1275 NLAR--LALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSL---KLKE 1329
L + + +++ L E + L+L R T L KL +
Sbjct: 56 GNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDL-RLQKLTGLEHEKLLD 114
Query: 1330 QSTETEKQIND 1340
+ E QI +
Sbjct: 115 EYKELLDQIAE 125
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 30.6 bits (69), Expect = 0.54
Identities = 17/102 (16%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 1435 KKLINEKESKAEELRK-HMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQES 1493
+ I++ EE+++ H IL+ N + E ++L+++ + A +V + + +Q
Sbjct: 16 RGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ-- 73
Query: 1494 HAANILAKEAYD-HAASVRNKTAAYVASTSNITKQLDEFLNA 1534
+I +E + +A +R + + + + + E+
Sbjct: 74 ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNAT 112
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 121
Score = 30.2 bits (67), Expect = 0.72
Identities = 11/77 (14%), Positives = 13/77 (16%), Gaps = 6/77 (7%)
Query: 855 SPGY-WNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDI- 912
SPG+ Y Q A + G L
Sbjct: 15 SPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCG 74
Query: 913 ----PCRPCPCPGTVES 925
P T S
Sbjct: 75 QESTDTERAPGKDTFYS 91
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus
abyssi [TaxId: 29292]}
Length = 437
Score = 31.7 bits (70), Expect = 0.93
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 1418 NGTLSESNSAKDYAETSKKLINEKESKAEEL----RKHMIILSESNSAKDYAETSKKLIN 1473
G L ++ + A K + S + +K + S SA+ Y + I+
Sbjct: 371 TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 430
>d1igra3 g.3.9.1 (A:150-299) Type 1 insulin-like growth factor
receptor Cys-rich domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 150
Score = 30.4 bits (67), Expect = 1.0
Identities = 22/120 (18%), Positives = 31/120 (25%), Gaps = 4/120 (3%)
Query: 803 CDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYP 862
C C + D + CR Y C P
Sbjct: 33 QKMCPSTCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNTYRF 92
Query: 863 TCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC--PCP 920
RC+ S + DGE + C +G+ + + C PC PCP
Sbjct: 93 EGWRCVDRDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNG--SQSMYCIPCEGPCP 150
Score = 28.4 bits (62), Expect = 4.6
Identities = 16/148 (10%), Positives = 30/148 (20%), Gaps = 4/148 (2%)
Query: 1034 GIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECN 1093
G K C++TT + + + C P + +
Sbjct: 5 GTMEEKPMCEKTTINNEYNYRCWTTNRCQKMCPSTCGKRACTENNECCHPECLGSCSAPD 64
Query: 1094 EYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGI 1153
T C+ + C + +++
Sbjct: 65 NDTACVACRHYYYAGVCVPACPPNTYRFEGWRCVDRDFCANILSAESSD----SEGFVIH 120
Query: 1154 GGVRCDTCARGYIGTAPDCSPCGECFDN 1181
G C G+I C C
Sbjct: 121 DGECMQECPSGFIRNGSQSMYCIPCEGP 148
>d1ep0a_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 183
Score = 30.5 bits (68), Expect = 1.2
Identities = 16/94 (17%), Positives = 24/94 (25%), Gaps = 5/94 (5%)
Query: 828 ALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRC-ICNGHADLCDSKTGTCISC 886
+ V+ + + TYG +G L D C
Sbjct: 75 VIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECI-VNYKC 133
Query: 887 RNSTDGENCERCINGYYGDPRLGIDIPCRPCPCP 920
E + I + DP +GID P
Sbjct: 134 TELYHPEY-DSGIP--WDDPDIGIDWPLEMVDDL 164
>d1ft5a_ a.138.1.3 (A:) Cytochrome c554 {Nitrosomonas europaea
[TaxId: 915]}
Length = 211
Score = 30.6 bits (68), Expect = 1.4
Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 364 SGGVCDSCEHNTEGRNCERCKQYFYKD---PNKEFSDPEVCLRCDCDPGGSLDDGICDPY 420
G + + K+ KD ++F E C C + GS G PY
Sbjct: 94 PGRNFRGDHRKSGQAFEKSGKKTPRKDLAKKGQDFHFEERCSACHLNYEGSPWKGAKAPY 153
Query: 421 TDDV 424
T
Sbjct: 154 TPFT 157
>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase
IroE {Escherichia coli [TaxId: 562]}
Length = 265
Score = 30.7 bits (68), Expect = 1.5
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 664 PVGSRAVK--VYPPACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIA--LLPNIQSIP 719
G+R + P P Y + ++ D N L+ ++ P I ++
Sbjct: 21 VDGTRHYRVWTAVPNTTAPASGYPI--LYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVG 78
Query: 720 FFQGPENFERAREFDHYRCGDSYIT 744
+ +R +D+ +S T
Sbjct: 79 YQTNLPFDLNSRAYDYTPAAESRKT 103
>d1nxma_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
{Streptococcus suis [TaxId: 1307]}
Length = 194
Score = 30.2 bits (67), Expect = 1.6
Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 3/89 (3%)
Query: 831 NICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGT-CISCRNS 889
+ V+ R Q R + NG L D + ++ +
Sbjct: 85 DGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVNDYWA 144
Query: 890 TDGENCERCINGYYGDPRLGIDIPCRPCP 918
+ + +N Y DP L I
Sbjct: 145 LELKPKYAFVN--YADPSLDIKWENLEEA 171
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 30.6 bits (67), Expect = 1.7
Identities = 14/172 (8%), Positives = 28/172 (16%)
Query: 1014 AGFFGNALEQNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASG 1073
GF G L + G + + D +N +
Sbjct: 17 TGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIR 76
Query: 1074 TGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPS 1133
V + + G + + G V D
Sbjct: 77 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD 136
Query: 1134 GSATSQCHQNNGTCVCHQGIGGVRCDTCARGYIGTAPDCSPCGECFDNWDSI 1185
++ N + + +P
Sbjct: 137 NKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVA 188
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal
domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Length = 56
Score = 27.3 bits (61), Expect = 2.1
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 1574 SLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTK 1610
S + L GDL +A K + + + +
Sbjct: 18 SFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAAR 54
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 28.1 bits (62), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1357 PQFTQGQEENEKALQRLNEKITSLEKNLP 1385
+ +E NEK LQ+L+ SL K+ P
Sbjct: 3 SGSSGDKEWNEKELQKLHCAFASLPKHKP 31
>d2htsa_ a.4.5.22 (A:) Heat-shock transcription factor {Milk yeast
(Kluyveromyces lactis) [TaxId: 28985]}
Length = 92
Score = 28.3 bits (63), Expect = 2.3
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 94 PAFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKT 147
PAF +K+ ++V + W S +G +I + F L YFK
Sbjct: 3 PAFVNKLWSMV--NDKSNEKFIHW-STSG---ESIVVPNRERFVQEVLPKYFKH 50
>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the
cellulosomal xylanase y {Clostridium thermocellum
[TaxId: 1515]}
Length = 273
Score = 30.1 bits (66), Expect = 2.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 666 GSRAVKVYPPACLEPGKKYKVHLIFH 691
G++++ VY P +P KKY + + H
Sbjct: 37 GTKSLNVYLPYGYDPNKKYNIFYLMH 62
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein
AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 171
Score = 29.5 bits (65), Expect = 2.4
Identities = 15/113 (13%), Positives = 30/113 (26%), Gaps = 3/113 (2%)
Query: 676 ACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQSIPFFQGPENFERAREFDH 735
+K+ L+ Q + + S +++ +G E H
Sbjct: 34 IVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCH 93
Query: 736 YRCGDSYITVYRGVP---IPEACKKQHYSIGMYVHHGANECDCDPTGSTSKYC 785
+ G P I + K+ + G G+ S +C
Sbjct: 94 EIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFC 146
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 27.4 bits (61), Expect = 2.4
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 1692 DVENEEKNLEKEVALAQKQASGLRSR 1717
DVE + EK + A + +
Sbjct: 1 DVEEWRRRQEKRLKELLALAERSQRK 26
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 54
Score = 27.2 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 1582 LTETAGDLAKANDLKRKANLTKAG 1605
LTE GD+ A + RK+ KA
Sbjct: 26 LTEANGDIELAIENMRKSGAIKAA 49
>d1nqla4 g.3.9.1 (A:481-614) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 28.8 bits (63), Expect = 2.8
Identities = 19/90 (21%), Positives = 25/90 (27%), Gaps = 3/90 (3%)
Query: 945 ECKEGYRGTRCDGCLDNYFGNPQE--RGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRY 1002
C+ RG C G P+E C C C+QC +
Sbjct: 21 SCRNVSRGRECVDKCKLLEGEPREFVENSECIQCHPECLPQAMNITCTGRGPDNCIQCAH 80
Query: 1003 DTEGDHC-QVCKAGFFGNALEQNCTECTCN 1031
+G HC + C AG G
Sbjct: 81 YIDGPHCVKTCPAGVMGENNTLVWKYADAG 110
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 26.6 bits (59), Expect = 3.2
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 932 TCQLDPRSQDVICECKEGYRGTRCDG 957
C+ + C C GY G RC G
Sbjct: 14 ECKYVKELRAPSCICHPGYHGERCHG 39
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 26.8 bits (59), Expect = 3.2
Identities = 8/24 (33%), Positives = 8/24 (33%)
Query: 932 TCQLDPRSQDVICECKEGYRGTRC 955
C C C GY G RC
Sbjct: 19 VCMHIESLDSYTCNCVIGYSGDRC 42
>d1m6ba4 g.3.9.1 (A:480-580) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 28.2 bits (62), Expect = 3.4
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
Query: 809 GTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCI 868
G +G GP C +C N+ + + R + EC C P CQ
Sbjct: 10 GCWGPGPGQCLSC-RNYSRGGVCVTHCNFLNGEPREFAHEAECFSCH------PECQPME 62
Query: 869 CNGHADLCDSKTGTCISCRNSTDGENC-ERCINGYYGD 905
+ S TC C + DG +C C +G G
Sbjct: 63 GTATCNGSGSD--TCAQCAHFRDGPHCVSSCPHGVLGA 98
>d2fj8a1 g.3.13.1 (A:64-122) Bowman-Birk inhibitor, BBI {Barley
(Hordeum vulgare) [TaxId: 4513]}
Length = 59
Score = 26.7 bits (59), Expect = 3.6
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 851 CDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDP 906
CD+ N PTC RC D TC +C S + CI+ Y+G
Sbjct: 6 CDKAICTRSNPPTC-RC-----VDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPV 55
>d1oi6a_ b.82.1.1 (A:) dTDP-4-keto-6-deoxy-glucose-5-epimerase EvaD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 202
Score = 29.0 bits (64), Expect = 3.7
Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 3/101 (2%)
Query: 818 CKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCD 877
+V + + + T+G+ GHA +
Sbjct: 67 TPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGV-GHAFVAL 125
Query: 878 SKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCP 918
+ + E ++ DP LG+ I P
Sbjct: 126 EDDTVMSYMLSRSYVTQDELALS--ALDPALGLPIDIGVEP 164
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia
coli [TaxId: 562]}
Length = 390
Score = 29.6 bits (65), Expect = 4.1
Identities = 10/148 (6%), Positives = 25/148 (16%), Gaps = 5/148 (3%)
Query: 391 PNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDVLVSGKCHCKPNVGGRRCDMCKDGFWN 450
PN + ++ + + + D + + G
Sbjct: 70 PNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKE 129
Query: 451 FNETNPNGCEPCTCNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYG 510
P GC N + + + + + +
Sbjct: 130 IKSAIPMGCVLTLPATGSE-----SNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTY 184
Query: 511 CKPCDCDPGASYDNNCDVISGQCKCKPH 538
P D +
Sbjct: 185 TLPPRQVANGVVDAFVHTVEQYVTKPVD 212
>d2c0za1 b.82.1.1 (A:1-190) Novobiocin biosynthesis protein NovW
{Streptomyces caeruleus [TaxId: 195949]}
Length = 190
Score = 29.0 bits (64), Expect = 4.4
Identities = 17/99 (17%), Positives = 24/99 (24%), Gaps = 3/99 (3%)
Query: 818 CKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCD 877
+V + V + + TYG GH
Sbjct: 66 VPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGI-GHGFCAI 124
Query: 878 SKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRP 916
S T + T E ++ DP L ID P
Sbjct: 125 SDEATLCYLSSGTYDPATEHGVH--PLDPELAIDWPTGT 161
>d1n8yc4 g.3.9.1 (C:489-608) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 120
Score = 27.9 bits (61), Expect = 4.4
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 19/120 (15%)
Query: 809 GTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCI 868
+G GP C C + + + + + + R + C C P C
Sbjct: 10 HCWGPGPTQCVNC-SHFLRGQECVEECRVWKGLPREYVSDKRCLPCHPE---------CQ 59
Query: 869 CNGHADLCDSKTGT-CISCRNSTDGENC-ERCINGYYGDPRLGIDIP-------CRPCPC 919
++ C C +C + D +C RC +G D C+PCP
Sbjct: 60 PQNSSETCFGSEADQCAACAHYKDSSSCVARCPSGVKPDLSYMPIWKYPDEEGICQPCPI 119
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 27.4 bits (61), Expect = 4.7
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 25/102 (24%)
Query: 1559 EQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVD 1618
+ E N L + E AGD A+D K ++ +
Sbjct: 21 RKFEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADD---------------KTAIESALT 64
Query: 1619 VLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQ 1660
L A +D K I A ++L+Q++ L + Q
Sbjct: 65 ALETALKGED---------KAAIEAKMQELAQVSQKLMEIAQ 97
>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 28.6 bits (62), Expect = 4.7
Identities = 13/136 (9%), Positives = 29/136 (21%), Gaps = 1/136 (0%)
Query: 842 CRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCING 901
C+ + +G + C +C + + + S +
Sbjct: 6 CKGRCWGPGSEDCQTLT-KTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRH 64
Query: 902 YYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDN 961
+ P T + + Q + + C +
Sbjct: 65 FNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRACPPD 124
Query: 962 YFGNPQERGGSCEPCD 977
+ CEPC
Sbjct: 125 KMEVDKNGLKMCEPCG 140
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of
phosphatidylinositol transfer protein sec14p {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 203
Score = 29.0 bits (64), Expect = 4.8
Identities = 30/207 (14%), Positives = 59/207 (28%), Gaps = 18/207 (8%)
Query: 617 DIVVRYEP--VTNTDWENVDVIVEREGNVDINGPCGNAVPQDDIKRTRLPVGSRAVKVYP 674
++ ++ P TD + V E G V+++ ++ + + + V+
Sbjct: 5 PLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMN-KVTSEERMLKNLVWEYESVVQYRL 63
Query: 675 PACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQSIPFFQGPENFERAREFD 734
PAC D G + SA ++ + I + PE + +
Sbjct: 64 PACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYY---PERMGKFYIIN 120
Query: 735 HYRCGDSYITVYRGVPIPEACKKQHYSIGMYVHHGANECDCD--PTGSTSKYCDQLGGNC 792
+ +++ P K Y + + P + GG
Sbjct: 121 APFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPV--------KFGGKS 172
Query: 793 VCKPNVVGRRCDRCAPGT--YGFGPEG 817
+ G P GPEG
Sbjct: 173 EVDESKGGLYLSDIGPWRDPKYIGPEG 199
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA,
C-domain {Enterococcus faecium [TaxId: 1352]}
Length = 211
Score = 28.9 bits (63), Expect = 5.0
Identities = 19/140 (13%), Positives = 28/140 (20%), Gaps = 9/140 (6%)
Query: 327 WKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQY 386
KPA + K+ N + Y+S I V N
Sbjct: 39 VKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVSGCEVGCAVLGNSAALVVG 98
Query: 387 FYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDVLVSGKCHCK-------PNVGGR 439
++ + + + G G
Sbjct: 99 EVDQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLA 158
Query: 440 RCDMCKD--GFWNFNETNPN 457
R DM G NE N
Sbjct: 159 RVDMFLQDNGRIVLNEVNTL 178
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 25.9 bits (57), Expect = 5.3
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 932 TCQLDPRSQDVICECKEGYRGTRCD 956
C C C+ GY G RC+
Sbjct: 18 QCIYLVDMSQNYCRCEVGYTGVRCE 42
>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia
coli [TaxId: 562]}
Length = 200
Score = 28.7 bits (63), Expect = 5.5
Identities = 13/88 (14%), Positives = 20/88 (22%)
Query: 785 CDQLGGNCVCKPNVVGRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRA 844
+G N +P V G + D V DN+ +
Sbjct: 54 FATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTG 113
Query: 845 QTYGRECDQCSPGYWNYPTCQRCICNGH 872
E + Y T + G
Sbjct: 114 HPVHHELRKNGEMYSFPITIGNNVWIGS 141
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 26.0 bits (57), Expect = 5.6
Identities = 8/24 (33%), Positives = 8/24 (33%)
Query: 932 TCQLDPRSQDVICECKEGYRGTRC 955
C C C GY G RC
Sbjct: 17 VCMYIEALDKYACNCVVGYIGERC 40
>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 28.2 bits (61), Expect = 6.4
Identities = 18/142 (12%), Positives = 32/142 (22%), Gaps = 14/142 (9%)
Query: 837 SGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTD-GENC 895
+G+ C+ T QCS C A + C+ CR D
Sbjct: 16 AGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCK 75
Query: 896 ERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRC 955
+ C +P + V
Sbjct: 76 DTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRA----------- 124
Query: 956 DGCLDNYFGNPQERGGSCEPCD 977
C + + ++ C+ C+
Sbjct: 125 --CGADSYEMEEDGVRKCKKCE 144
>d1c2aa1 g.3.13.1 (A:4-64) Bowman-Birk inhibitor, BBI {Barley
(Hordeum vulgare) [TaxId: 4513]}
Length = 61
Score = 25.9 bits (57), Expect = 7.4
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 6/56 (10%)
Query: 851 CDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDP 906
CD+ P C C D TC SC S + C + Y GDP
Sbjct: 7 CDEAVCTRSIPPIC-TC-----MDEVFECPKTCKSCGPSMGDPSRRICQDQYVGDP 56
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 28.5 bits (62), Expect = 7.5
Identities = 16/151 (10%), Positives = 30/151 (19%), Gaps = 22/151 (14%)
Query: 1058 VSCDRCLKNHWKIASGTGCEPCDC---DPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQ 1114
+ C ++ + G E + G + +
Sbjct: 155 IYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK 214
Query: 1115 TNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTCARGYIG---TAPD 1171
+ P D ++N V + G + G P
Sbjct: 215 KVWGHIPGTHEGGADG-------MDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF 267
Query: 1172 CSPCGECFDNWDSILRGLADQTTKVITDASN 1202
P F T +T+ N
Sbjct: 268 EKPSNLHFK---------PQTKTIFVTEHEN 289
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 28.3 bits (61), Expect = 9.3
Identities = 15/164 (9%), Positives = 31/164 (18%), Gaps = 2/164 (1%)
Query: 1023 QNCTECTCNILGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCD 1082
DR K+A+G+ +
Sbjct: 77 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF 136
Query: 1083 PIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQ 1142
+ + +G N V F P G A +
Sbjct: 137 TGLNDPDGVAVDNSGNVYVTDTDN--NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 194
Query: 1143 NNGTCVCHQGIGGVRCDTCARGYIGTAPDCSPCGECFDNWDSIL 1186
T + + + + +P D+ ++
Sbjct: 195 VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY 238
>d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori
[TaxId: 210]}
Length = 365
Score = 28.4 bits (63), Expect = 9.7
Identities = 8/95 (8%), Positives = 17/95 (17%)
Query: 1092 CNEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQ 1151
+ G + + + + +Q H
Sbjct: 139 AKMLLREIGIVCESGIIEIGGIKAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHD 198
Query: 1152 GIGGVRCDTCARGYIGTAPDCSPCGECFDNWDSIL 1186
IGGV + D+ +
Sbjct: 199 SIGGVALIRARSIKTNQKLPIGLGQGLYAKLDAKI 233
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.422
Gapped
Lambda K H
0.267 0.0658 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,913,198
Number of extensions: 364998
Number of successful extensions: 2239
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1746
Number of HSP's successfully gapped: 331
Length of query: 1807
Length of database: 2,407,596
Length adjustment: 98
Effective length of query: 1709
Effective length of database: 1,062,056
Effective search space: 1815053704
Effective search space used: 1815053704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.0 bits)