BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2548
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIZ7|OPLA_ARATH 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1
Length = 1266
Score = 243 bits (620), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 144/195 (73%), Gaps = 12/195 (6%)
Query: 2 GNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQ 61
GN NAP+++T +AV+YCLRC+V DIPLNQGCL P++I++ GS L+P++ AVVGGNV
Sbjct: 1031 GNWNAPEAVTSAAVIYCLRCLVNVDIPLNQGCLAPVEIRIPAGSFLSPSEKAAVVGGNVL 1090
Query: 62 TSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNIN 121
TSQRV DV+L AF A SQGCMNN+TFGD T+GYYET+GGG GA GP N
Sbjct: 1091 TSQRVTDVVLTAFQACACSQGCMNNLTFGDDTFGYYETIGGGCGA----------GPTWN 1140
Query: 122 --SGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMT 179
SGV HMTNTR+TD EI E RYP++L RFGLRE S G G + GG G++RE FRKP+
Sbjct: 1141 GTSGVQCHMTNTRMTDPEIFEQRYPVLLHRFGLRENSGGNGLHKGGDGLVREIEFRKPVV 1200
Query: 180 LCMLTERRVFWPQGL 194
+ +L+ERRV P+GL
Sbjct: 1201 VSILSERRVHSPRGL 1215
>sp|P28273|OPLA_YEAST 5-oxoprolinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=OXP1 PE=1 SV=2
Length = 1286
Score = 224 bits (570), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 142/206 (68%), Gaps = 14/206 (6%)
Query: 2 GNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQ 61
GN NAP++IT SA++YCLRC+VG DIPLNQGCL P+ IK+ GS+L+P AVVGGNV
Sbjct: 1031 GNLNAPEAITNSAILYCLRCLVGEDIPLNQGCLKPLTIKIPAGSLLSPRSGAAVVGGNVL 1090
Query: 62 TSQRVVDVILKAFGVAASSQGCMNNITFGD------------QTWGYYETVGGGAGASRI 109
TSQRV DVILK F V A SQG NN TFG + +GYYET+ GG+GA
Sbjct: 1091 TSQRVTDVILKTFNVMADSQGDCNNFTFGTGGNSGNKTDKQIKGFGYYETICGGSGAG-- 1148
Query: 110 QDFAEGGGPNINSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMI 169
D G G N + VH++MTNTR+TD E+ E RYP++L F +R GS G GKY+GG+G++
Sbjct: 1149 ADSWRGSGWNGSDAVHTNMTNTRMTDTEVFERRYPVLLKEFSIRRGSGGKGKYTGGNGVV 1208
Query: 170 REYVFRKPMTLCMLTERRVFWPQGLQ 195
R+ FRK +T +L+ERRV P G++
Sbjct: 1209 RDVQFRKAVTASILSERRVIGPHGIK 1234
>sp|O14841|OPLA_HUMAN 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3
Length = 1288
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 146/197 (74%), Gaps = 12/197 (6%)
Query: 1 MGNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNV 60
GN NAP+++T SA++YCLRC+VG DIPLNQGCL P+++ + GSIL+P+ AVVGGNV
Sbjct: 1021 FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV 1080
Query: 61 QTSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNI 120
TSQRVVDVIL AFG A+SQGCMNN+T G+ GYYETV GGAGA GP+
Sbjct: 1081 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGA----------GPSW 1130
Query: 121 N--SGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPM 178
+ SGVHSHMTNTRITD EILE+RYP++L RF LR GS G G++ GG G+ RE +FR+
Sbjct: 1131 HGRSGVHSHMTNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEA 1190
Query: 179 TLCMLTERRVFWPQGLQ 195
L +LTERR F P GL
Sbjct: 1191 LLSVLTERRAFRPYGLH 1207
>sp|Q10093|YAOE_SCHPO Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1
Length = 1260
Score = 219 bits (559), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 18/201 (8%)
Query: 2 GNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQ 61
GN NAP +IT S+V+YCLR ++ DIPLN+GCL PI+I++ P LNP++ AVVGGNV
Sbjct: 1014 GNWNAPIAITYSSVIYCLRSIINQDIPLNEGCLKPIEIRIPPSCFLNPSETAAVVGGNVL 1073
Query: 62 TSQRVVDVILKAFGVAASSQGCMNNITF------GDQTWGYYETVGGGAGASRIQDFAEG 115
TSQR+ DVILKAF + A+SQGCMNN+TF G++ + YET+ GGAGA
Sbjct: 1074 TSQRITDVILKAFSICAASQGCMNNLTFGYDGENGEEGFAMYETIAGGAGA--------- 1124
Query: 116 GGPNIN--SGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYV 173
GP N SGVH+HMTNTRITD E++E R P++L RF LRE S G G+Y GG G+IR +
Sbjct: 1125 -GPTWNGTSGVHTHMTNTRITDPEVVERRAPVILRRFCLRENSGGKGEYHGGDGVIRHFE 1183
Query: 174 FRKPMTLCMLTERRVFWPQGL 194
FR+ M +L+ERR P G+
Sbjct: 1184 FRRSMHCSILSERRSRAPYGM 1204
>sp|Q8K010|OPLA_MOUSE 5-oxoprolinase OS=Mus musculus GN=Oplah PE=2 SV=1
Length = 1288
Score = 213 bits (543), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 144/195 (73%), Gaps = 8/195 (4%)
Query: 1 MGNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNV 60
GN NAP++IT SA++YCLRC+VG DIPLNQGCL P+Q+ + GSIL+P+ AVVGGNV
Sbjct: 1021 FGNLNAPRAITLSALIYCLRCLVGRDIPLNQGCLAPVQVIIPKGSILDPSPEAAVVGGNV 1080
Query: 61 QTSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNI 120
TSQRVVDVIL AFG A+SQGCMNN+T G+ GYYETV GGAGA +
Sbjct: 1081 LTSQRVVDVILGAFGACAASQGCMNNVTLGNARMGYYETVAGGAGAGPGW--------HG 1132
Query: 121 NSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMTL 180
SGVHSHMTNTRITD EILE+RYP++L RF LR GS G G++ GG G++RE VFR+ L
Sbjct: 1133 RSGVHSHMTNTRITDPEILESRYPVILRRFELRPGSGGRGRFRGGDGVVRELVFREEALL 1192
Query: 181 CMLTERRVFWPQGLQ 195
+LTERR F P GL
Sbjct: 1193 SVLTERRAFQPYGLH 1207
>sp|Q75WB5|OPLA_BOVIN 5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1
Length = 1288
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 145/194 (74%), Gaps = 8/194 (4%)
Query: 1 MGNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNV 60
GN NAP++IT SA++YCLRC+VG DIPLNQGCL P+++ + GSIL+P+ + AVVGGNV
Sbjct: 1021 FGNLNAPRAITLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPKGSILDPSPDAAVVGGNV 1080
Query: 61 QTSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNI 120
TSQRVVDVIL AFG A+SQGCMNN+T G+ GYYETV GGAGA +
Sbjct: 1081 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPGW--------HG 1132
Query: 121 NSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMTL 180
SGVHSHMTNTRITD EILE+RYP++L RF LR GS G G++ GG G+IRE +FR+ L
Sbjct: 1133 RSGVHSHMTNTRITDPEILESRYPVILRRFELRLGSGGRGRFRGGDGIIRELLFREEALL 1192
Query: 181 CMLTERRVFWPQGL 194
+LTERR F P GL
Sbjct: 1193 SVLTERRAFQPYGL 1206
>sp|Q10094|YAOF_SCHPO Uncharacterized protein C11D3.15 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC11D3.15 PE=3 SV=1
Length = 1317
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 138/205 (67%), Gaps = 19/205 (9%)
Query: 2 GNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQ 61
GN NAP+++T SA++YCLR ++ +IPLNQGCL PI++ + L P++ AVVGGNV
Sbjct: 1032 GNINAPEAVTYSAIIYCLRVLISENIPLNQGCLLPIKVIIPDNCFLKPSETAAVVGGNVL 1091
Query: 62 TSQRVVDVILKAFGVAASSQGCMNNITFG-----------DQTWGYYETVGGGAGASRIQ 110
TSQR+ D ILKAF A+SQG NN+TFG +GYYET+ GG+GA
Sbjct: 1092 TSQRITDTILKAFQACAASQGDTNNLTFGIGGKDPETGEVKPGFGYYETICGGSGAI--- 1148
Query: 111 DFAEGGGPNINSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIR 170
G + SGVH+HMTNTRITD E+LE RYP++L +F +RE S G GKY GG G+IR
Sbjct: 1149 -----DGLDGTSGVHTHMTNTRITDLEVLERRYPVILRKFIIRENSGGAGKYKGGDGVIR 1203
Query: 171 EYVFRKPMTLCMLTERRVFWPQGLQ 195
+ FR P+TL +L+ERR + P G++
Sbjct: 1204 DIEFRIPVTLSILSERRAYHPYGMK 1228
>sp|Q54NW6|OPLA_DICDI 5-oxoprolinase OS=Dictyostelium discoideum GN=oplah PE=3 SV=2
Length = 1265
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 138/195 (70%), Gaps = 12/195 (6%)
Query: 2 GNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQ 61
GN NAP SIT SA +Y LR MV +IPLNQGCL PI + PGSILNP+ + AVVGGNV
Sbjct: 1024 GNTNAPTSITLSATIYSLRAMVKSEIPLNQGCLAPILTVIPPGSILNPSFDSAVVGGNVL 1083
Query: 62 TSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNIN 121
TSQR+ DVIL AFG A+SQGCMNN+TFGD+T GYYET+ GG GA GPN N
Sbjct: 1084 TSQRLTDVILSAFGACANSQGCMNNLTFGDETLGYYETIAGGTGA----------GPNFN 1133
Query: 122 --SGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMT 179
+ V SHMTNTRITD EI+E RYP+++ F +R GS G GK+ GG G++RE F K T
Sbjct: 1134 GFTAVQSHMTNTRITDVEIMEKRYPVIVKEFSVRYGSGGDGKFKGGDGVVREIQFLKNFT 1193
Query: 180 LCMLTERRVFWPQGL 194
+ +L+ERR P+GL
Sbjct: 1194 VSILSERRSLQPRGL 1208
>sp|P97608|OPLA_RAT 5-oxoprolinase OS=Rattus norvegicus GN=Oplah PE=1 SV=2
Length = 1288
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 144/195 (73%), Gaps = 8/195 (4%)
Query: 1 MGNCNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNV 60
GN NAP++IT SA++YCLRC+VG DIPLNQGCL P+++ + GSIL+P+ AVVGGNV
Sbjct: 1021 FGNLNAPRAITLSALIYCLRCLVGRDIPLNQGCLAPVRVIIPKGSILDPSPEAAVVGGNV 1080
Query: 61 QTSQRVVDVILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNI 120
TSQRVVDVIL AFG ++SQGCMNN+T G+ GYYETV GGAGA +
Sbjct: 1081 LTSQRVVDVILGAFGACSASQGCMNNVTLGNARMGYYETVAGGAGAGPGW--------HG 1132
Query: 121 NSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMTL 180
SGVHSHMTNTRITD EILE+RYP++L RF LR GS G G++ GG G++RE VFR+ L
Sbjct: 1133 RSGVHSHMTNTRITDPEILESRYPVILRRFELRPGSGGRGRFRGGDGVVRELVFREEALL 1192
Query: 181 CMLTERRVFWPQGLQ 195
+LTERR F P GL
Sbjct: 1193 SVLTERRAFQPYGLH 1207
>sp|Q58373|Y963_METJA Uncharacterized protein MJ0963 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0963 PE=3 SV=1
Length = 563
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
Query: 4 CNAPKSITKSAVMYCLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQTS 63
NA +T ++ + L+ ++ D+P+N G + I +I+NP V GNV+TS
Sbjct: 276 LNAVYGVTVASTSFALKAVIDPDLPMNHGIFRVLNIIAPEETIVNPKKPAPVSVGNVETS 335
Query: 64 QRVVDVILKAF------GVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGG 117
QR+VDVI KA V A+S G MNN+ G + W +YET+GGG G +D +G
Sbjct: 336 QRIVDVIFKALYHEFPDRVPAASNGSMNNVIIGGRGWAFYETIGGGFGGRNGKDGVDG-- 393
Query: 118 PNINSGVHSHMTNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKP 177
VH++MTNT T E++E YPIM+ + LRE S G GKY GG G+ R Y
Sbjct: 394 ------VHANMTNTLNTPIEVIENEYPIMILEYSLREDSGGAGKYRGGLGIRRVYKMLSD 447
Query: 178 MTLCMLTERRVFWPQGLQ 195
L ++ +R P G+
Sbjct: 448 CMLSIIADRIKISPWGVN 465
>sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomonas sp. (strain NS671)
GN=hyuB PE=3 SV=1
Length = 592
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 18/187 (9%)
Query: 18 CLRCMVGYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQTSQRVVDVILKAFGVA 77
L V + P N G + PI+I G++ NP + + V D ++KA
Sbjct: 317 LLDSTVYGNFPQNSGLIRPIKIVAPKGTLCNPIFPAPTIA-RFNSGNAVADTLMKALAQV 375
Query: 78 ASSQ-----GCMNNITFGDQT----WGYYETVGGGAGASRIQDFAEGGGPNINSGVHSHM 128
Q G + + F Q+ W Y + + G G +D + V +
Sbjct: 376 VPHQVSAGVGNLQVVAFSGQSNENYWVYMDIMEGSYGGRYGKDGMDA--------VDTLY 427
Query: 129 TNTRITDAEILETRYPIMLARFGLREGSAGLGKYSGGSGMIREYVFRKPMTLCMLTERRV 188
NTR E +E+ YP+ + R+ LR+ + GK+ GG G IRE F + + +
Sbjct: 428 ANTRNNPIEDIESHYPLRVNRYELRDNDSAPGKWRGGIGSIREVSFLADGSFSVEADGHK 487
Query: 189 FWPQGLQ 195
+ P G
Sbjct: 488 YAPWGFD 494
>sp|A0PW29|HEM3_MYCUA Porphobilinogen deaminase OS=Mycobacterium ulcerans (strain Agy99)
GN=hemC PE=3 SV=1
Length = 314
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 88 TFGDQTWGYYETVGGGAGASRIQDFAEGGGPNINSGVHSH-----MTNTRITDAEILETR 142
T GD++ ET+G G + +++ E G +++ VHSH + R T A I +
Sbjct: 37 TLGDRSSAPIETLGVGVFTTALREAIEDG--RVDAAVHSHKDLPTAQDPRFTIAAIPPRQ 94
Query: 143 YP--IMLARFGLREGSAGLGKYSGGSGMIREYVFR 175
P ++AR GL G +G G S R FR
Sbjct: 95 DPRDAVVARDGLVLGELPVGSLVGTSSPRRAAQFR 129
>sp|Q2GJ68|RPOB_ANAPZ DNA-directed RNA polymerase subunit beta OS=Anaplasma phagocytophilum
(strain HZ) GN=rpoB PE=3 SV=1
Length = 1383
Score = 32.3 bits (72), Expect = 2.5, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 24 GYDIPLNQGCLTPIQIKLTPGSILNPNDNVAVVGGNVQTSQRV--------------VDV 69
GYD+P QG LT +++ + L P D +A GN R+ VD+
Sbjct: 1070 GYDLP--QGVLTIVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPVEDMPHLEDGTPVDI 1127
Query: 70 ILKAFGVAASSQGCMNNITFGDQTWGYYETVGGGAGASRIQDFAEGGGPNINS 122
IL + GV + NI +T + V G R+ D E GP + S
Sbjct: 1128 ILNSLGVPSRM-----NIGQILETHLGWAAVNLGHRVGRMLDSGEEEGPVVES 1175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,658,938
Number of Sequences: 539616
Number of extensions: 3401879
Number of successful extensions: 7369
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7342
Number of HSP's gapped (non-prelim): 30
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)