BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2549
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NQM4|PIHD3_HUMAN Protein PIH1D3 OS=Homo sapiens GN=PIH1D3 PE=2 SV=1
Length = 214
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 85 EDDKWAIWNKDEVPSMDTLPDDANLDPRITPEYDIMYQQSVTSEDIYLQMGGKTPSSVSC 144
E++ IWN +E+P + D D R PEY+I+++Q V +EDI+L + K S+ C
Sbjct: 82 EENNEDIWNSEEIP--EGAEYDDMWDVREIPEYEIIFRQQVGTEDIFLGLSKKDSSTGCC 139
Query: 145 EDMLVTIQLPGEQRENVDCDLTTQHVDIRSIKYRLALPLPHPVLPHLCQATWDSDKFELK 204
+++ I+LP ++ D+ +D+R+ + +L + LP V +A + + L+
Sbjct: 140 SELVAKIKLPNTNPSDIQIDIQETILDLRTPQKKLLITLPELVECTSAKAFYIPETETLE 199
Query: 205 LTLRLTREFDCVNF 218
+T+ + RE D NF
Sbjct: 200 ITMTMKRELDIANF 213
>sp|Q0IEW8|KTU_AEDAE Protein kintoun OS=Aedes aegypti GN=AAEL007767 PE=3 SV=1
Length = 898
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDCDLTTQHVDIR 173
TP Y +++++ V ++ ++ K +++ E +LV I+LP + N C L ++
Sbjct: 248 TPAYKLIHRKEVEYHELTGELDAKLDAAIPKELVLV-IELPLLKSAN-QCTLNVTSSEVH 305
Query: 174 SI-----KYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTR 211
I KY+L + LP+ VL A +++D+ L + L + R
Sbjct: 306 LISDSPAKYKLEVKLPYTVLEKNGSAKFNTDETTLTVLLPVAR 348
>sp|B4P238|KTU_DROYA Protein kintoun OS=Drosophila yakuba GN=Ppi20 PE=3 SV=1
Length = 846
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P Y I + V + ++ K +V ++V I+LP R +C D+T++ V
Sbjct: 258 VPRYSIKHSHDVDLSEYTDELDAKLHVTVP-RSLVVEIELPL-LRSTAECQLDVTSKSVY 315
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V QA +D+D L +TL + R+
Sbjct: 316 LFSERQGAKYRLKLDLPFSVDDKAGQARFDTDMRRLSITLPVVRK 360
>sp|Q9NVR5|KTU_HUMAN Protein kintoun OS=Homo sapiens GN=DNAAF2 PE=1 SV=2
Length = 837
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 104 PDDANLDPRIT-PEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPG-EQRENV 161
P +A L P T P Y ++ + V +D Y PS V E +++TI+LP E
Sbjct: 241 PPEAALQPAPTEPRYSVVQRHHVDLQD-YRCSRDSAPSPVPHE-LVITIELPLLRSAEQA 298
Query: 162 DCDLTTQHV--DIRSIKYRLALPLPHPVLPHLCQATWDSDKFELKLTL 207
++T + + D R YRL L LP+PV +A ++ + +L +TL
Sbjct: 299 ALEVTRKLLCLDSRKPDYRLRLSLPYPVDDGRGKAQFNKARRQLVVTL 346
>sp|B3N9E4|KTU_DROER Protein kintoun OS=Drosophila erecta GN=Ppi20 PE=3 SV=1
Length = 845
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P Y I + V + ++ K +V ++V I+LP R +C D+T++ V
Sbjct: 258 VPRYSIKHSHDVDLSEYTDELDAKLHVTVP-RALVVEIELPL-LRSTAECQLDVTSKSVY 315
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V QA +D+D L +TL + R+
Sbjct: 316 LFSERQGAKYRLKLDLPFTVDDKAGQARFDTDLRRLSITLPVVRK 360
>sp|Q68WV8|SYL_RICTY Leucine--tRNA ligase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=leuS PE=3 SV=1
Length = 828
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 161 VDCDLTTQHVDIRSIKY--RLALPLPHPVLPHLCQATWDSDKFELKLTLRLTREFD 214
+ C+++ +D+R+IKY + + L +P +PH+ + W + +L + EFD
Sbjct: 705 IYCEISKDKIDVRTIKYGFNVLIQLLNPFIPHITEEIWQKLGNKERLYKSVFAEFD 760
>sp|P34706|SDC3_CAEEL Zinc finger protein sdc-3 OS=Caenorhabditis elegans GN=sdc-3 PE=2
SV=2
Length = 2150
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 122 QQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQ-RENVDCDLTTQHVDIRSIKYRLA 180
+Q +DI L++ G+ P CE ++ +Q+ E+ EN DC + + + +S++
Sbjct: 1735 KQQQILDDIKLELNGEPPQKRECEILMERVQVKIEEGVENADCRIVQANFNCKSVEEHET 1794
Query: 181 LPL 183
LPL
Sbjct: 1795 LPL 1797
>sp|B4MPK3|KTU_DROWI Protein kintoun OS=Drosophila willistoni GN=Ppi20 PE=3 SV=1
Length = 1204
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 111 PRIT-PEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTT 167
P+ T P+Y I Y V + ++ K + ++V I+LP R +C D+T+
Sbjct: 265 PKFTEPKYSIKYSHDVDLSEYTNELDAKLQVT-KPRALVVEIELP-LLRSTAECELDVTS 322
Query: 168 QHVDIRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTR 211
+ + + S KYRL L LP+ V +A +D+DK L + L + R
Sbjct: 323 KSIYLLSERAGAKYRLKLDLPYTVDDKSGRARFDTDKRRLNIHLPVIR 370
>sp|B3MG50|KTU_DROAN Protein kintoun OS=Drosophila ananassae GN=Ppi20 PE=3 SV=1
Length = 843
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 102 TLPDDANLDPRI--------------TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDM 147
T P +N +PR+ P Y I + V + ++ K +V ++
Sbjct: 228 TAPPTSNPEPRVHPMKTKAAPVPEFTIPRYSIKHSHDVDLSEYTDELDAKLHVTVP-RNL 286
Query: 148 LVTIQLPGEQRENVDC--DLTTQHVDIRS----IKYRLALPLPHPVLPHLCQATWDSDKF 201
+V I+LP R +C D+T++ V + S KYRL + LP V A +D+D
Sbjct: 287 VVEIELPL-LRSTAECQLDVTSKSVYLLSEKPGAKYRLKMDLPFTVDDKAGSARFDTDLR 345
Query: 202 ELKLTLRLTR 211
L +TL + R
Sbjct: 346 RLSITLPVVR 355
>sp|Q7Q9F6|KTU_ANOGA Protein kintoun OS=Anopheles gambiae GN=AGAP005250 PE=3 SV=4
Length = 862
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDCDL----TTQH 169
TPEY I+ + V ++ ++ K ++ E + V I LP + +C L TT H
Sbjct: 256 TPEYKIVQCRDVEYGEMTNELDAKIDVTIPRE-LKVVITLP-LLKSTAECALDVTKTTLH 313
Query: 170 -VDIRSIKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
V + +Y+L L LP+ V +AT++ + L +TL + R+
Sbjct: 314 LVSEKPARYKLELKLPYEVKESEGKATFNVEARSLTVTLPVLRK 357
>sp|B4HR78|KTU_DROSE Protein kintoun OS=Drosophila sechellia GN=Ppi20 PE=3 SV=1
Length = 838
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P Y I + V + ++ K +V ++V I+LP R +C D+T++ V
Sbjct: 256 VPRYTIKHSHDVDLSEYTDELDAKLHVTVP-RSLVVEIELPL-LRSTAECQLDVTSKSVY 313
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V +A +D+D L +TL + R+
Sbjct: 314 LFSERQGAKYRLKLDLPFIVDDKAGRARFDTDMRRLSITLPVVRK 358
>sp|Q0E9G3|KTU_DROME Protein kintoun OS=Drosophila melanogaster GN=Ppi20 PE=1 SV=1
Length = 834
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P Y I + V + ++ K +V ++V I+LP R +C D+T++ +
Sbjct: 256 VPRYTIKHSHDVDLSEYTDELDAKLHVTVP-RSLVVEIELPL-LRSTAECQLDVTSKSIY 313
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V +A +D+D L +TL + R+
Sbjct: 314 LFSERQGAKYRLKLDLPFIVDDKAGRARFDTDMRRLSITLPVVRK 358
>sp|Q0VC73|KTU_BOVIN Protein kintoun OS=Bos taurus GN=DNAAF2 PE=2 SV=2
Length = 829
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 104 PDDANLDPRIT-PEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPG-EQRENV 161
P +A P T P Y ++ + V +D Y P +V ++++VTI+LP E
Sbjct: 244 PPEAVRQPAPTEPRYSVVQRHHVDLQD-YRCSRDSAPGTVP-QELVVTIELPLLRSAEQA 301
Query: 162 DCDLTTQHV--DIRSIKYRLALPLPHPVLPHLCQATWDSDKFELKLTL 207
++T + + D R YRL L LP+PV +A ++ + +L +TL
Sbjct: 302 ALEVTGKLLCLDSRKPDYRLRLSLPYPVDDSRGKAQFNKARRQLVVTL 349
>sp|Q5FVL7|KTU_RAT Protein kintoun OS=Rattus norvegicus GN=Dnaaf2 PE=2 SV=2
Length = 817
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 138 TPSSVSCEDMLVTIQLP---GEQRENVDCDLTTQHVDIRSIKYRLALPLPHPVLPHLCQA 194
PS+V E ++VTI+LP +R ++ +D R+ YRL L LP+PV +A
Sbjct: 278 APSTVPHE-LVVTIELPLLRSAERAELEVKGKLLCLDSRNPDYRLRLSLPYPVDDGRGRA 336
Query: 195 TWDSDKFELKLTL 207
++ + +L +TL
Sbjct: 337 QYNKARRQLVVTL 349
>sp|Q292G3|KTU_DROPS Protein kintoun OS=Drosophila pseudoobscura pseudoobscura GN=Ppi20
PE=3 SV=2
Length = 846
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P+Y I V + ++ K +V ++V I+LP R +C D+T + V
Sbjct: 256 VPKYSIKQSHDVDLSEYTDELDAKLHVTVP-RSLVVEIELPL-LRSTAECQLDVTAKSVY 313
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V A +D++K L +TL + R+
Sbjct: 314 LLSERLGAKYRLKLDLPFVVDDKAGNARFDTEKRRLSITLPVVRK 358
>sp|B4GDK5|KTU_DROPE Protein kintoun OS=Drosophila persimilis GN=Ppi20 PE=3 SV=1
Length = 846
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 114 TPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDC--DLTTQHVD 171
P+Y I V + ++ K +V ++V I+LP R +C D+T + V
Sbjct: 256 VPKYSIKQSHDVDLSEYTDELDAKLHVTVP-RSLVVEIELPL-LRSTAECQLDVTAKSVY 313
Query: 172 IRS----IKYRLALPLPHPVLPHLCQATWDSDKFELKLTLRLTRE 212
+ S KYRL L LP V A +D++K L +TL + R+
Sbjct: 314 LLSERLGAKYRLKLDLPFVVDDKAGNARFDTEKRRLSITLPVVRK 358
>sp|Q9H2F9|CCD68_HUMAN Coiled-coil domain-containing protein 68 OS=Homo sapiens GN=CCDC68
PE=2 SV=1
Length = 335
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 108 NLDPRITPEYDIMYQQSVTSEDIYLQMGGKTPSSVSCEDMLVTIQLPGEQRENVDCDLTT 167
NL R+ E + ++ ++ E+ LQ+ SC+D+ I + EQ ++ + +
Sbjct: 193 NLVQRMEKEKRTLLERKLSLENKLLQLKSSATYGKSCQDLQREISILQEQISHLQFVIHS 252
Query: 168 QHVDIRSI 175
QH ++RS+
Sbjct: 253 QHQNLRSV 260
>sp|Q8BPI1|KTU_MOUSE Protein kintoun OS=Mus musculus GN=Dnaaf2 PE=1 SV=2
Length = 814
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 138 TPSSVSCEDMLVTIQLP---GEQRENVDCDLTTQHVDIRSIKYRLALPLPHPVLPHLCQA 194
PS+V E ++VTI+LP +R ++ +D R+ YRL L LP+PV +A
Sbjct: 279 APSTVPHE-LVVTIELPLLRSVERAELEVKGKLLCLDSRNPDYRLRLSLPYPVDDGRGKA 337
Query: 195 TWDSDKFELKLTL 207
++ + +L +TL
Sbjct: 338 QYNKARRQLVVTL 350
>sp|Q0P4V4|KTU_XENTR Protein kintoun OS=Xenopus tropicalis GN=dnaaf2 PE=2 SV=1
Length = 785
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 79 SAKTDEEDDKWAIWNKDEVPSMDTLPDDANLDPRITPEYDIMYQQSVTSEDIYLQMGGKT 138
+A E+ D+ + K+ + T D N+ TP Y + ++ V +D + T
Sbjct: 222 TAVGTEKKDQKRVIQKECKQHLVTPEQDPNVQVAATPNYTVRHRSYVDLQD-FRDSRDST 280
Query: 139 PSSVSCEDMLVTIQLP-GEQRENVDCDLTTQHVDIRSIK--YRLALPLPHPVLPHLCQAT 195
PS V +++++T+ LP V+ + +++ + S K Y+L + LP+ V + +A
Sbjct: 281 PSPVP-KELVITVDLPLLNSAAGVNLHIAGKNLSLESEKPAYKLNVKLPYAVEDNQGKAQ 339
Query: 196 WDSDKFELKLTL 207
++ K +L +T+
Sbjct: 340 FNKVKKQLIITV 351
>sp|Q9ZDB1|SYL_RICPR Leucine--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E)
GN=leuS PE=3 SV=1
Length = 828
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 161 VDCDLTTQHVDIRSIKY--RLALPLPHPVLPHLCQATWDSDKFELKLTLRLTREFD 214
+ +++ +D+R+IKY + + L +P +PH+ + W + +L + EFD
Sbjct: 705 IYYEISKDRIDVRTIKYGFNVLVQLLNPFIPHITEEIWQKLGNKERLYKSVFAEFD 760
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,496,430
Number of Sequences: 539616
Number of extensions: 4051411
Number of successful extensions: 8609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 8570
Number of HSP's gapped (non-prelim): 100
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)