Query psy255
Match_columns 70
No_of_seqs 140 out of 1012
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:06:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 99.8 4.1E-21 1.4E-25 125.9 7.0 70 1-70 451-522 (526)
2 3khd_A Pyruvate kinase; malari 99.8 3.9E-20 1.3E-24 121.0 7.9 70 1-70 445-516 (520)
3 1e0t_A Pyruvate kinase, PK; ph 99.8 8E-20 2.7E-24 118.7 8.1 69 1-70 397-467 (470)
4 3gg8_A Pyruvate kinase; malari 99.8 5.6E-20 1.9E-24 120.2 7.3 70 1-70 436-507 (511)
5 3t05_A Pyruvate kinase, PK; te 99.8 1.1E-19 3.6E-24 120.7 8.0 70 1-70 419-490 (606)
6 3gr4_A Pyruvate kinase isozyme 99.8 1.1E-19 3.8E-24 119.5 6.4 70 1-70 470-546 (550)
7 1a3w_A Pyruvate kinase; allost 99.8 2.8E-19 9.5E-24 116.9 7.6 70 1-70 421-497 (500)
8 3hqn_D Pyruvate kinase, PK; TI 99.8 1.2E-19 4.3E-24 118.3 5.1 70 1-70 420-495 (499)
9 2e28_A Pyruvate kinase, PK; al 99.7 9.5E-18 3.2E-22 111.3 7.8 70 1-70 400-471 (587)
10 3qtg_A Pyruvate kinase, PK; TI 99.5 6.2E-14 2.1E-18 90.9 5.8 59 1-70 400-459 (461)
11 3gwa_A 3-oxoacyl-(acyl-carrier 87.9 1.2 4.2E-05 27.8 5.0 26 31-56 326-351 (365)
12 3il6_A 3-oxoacyl-[acyl-carrier 82.6 2.6 9.1E-05 25.8 4.6 27 30-56 279-307 (321)
13 3il3_A 3-oxoacyl-[acyl-carrier 82.4 1.2 3.9E-05 27.5 2.9 26 31-56 284-309 (323)
14 4dfe_A 3-oxoacyl-[acyl-carrier 82.0 1.2 4.1E-05 27.3 2.9 25 32-56 295-319 (333)
15 1vc3_B L-aspartate-alpha-decar 80.4 1.1 3.8E-05 23.4 2.0 15 43-57 52-66 (96)
16 1uhe_A Aspartate 1-decarboxyla 79.7 1.1 3.7E-05 23.5 1.8 14 43-56 50-63 (97)
17 3plx_B Aspartate 1-decarboxyla 78.9 1.2 4E-05 23.6 1.8 14 43-56 51-64 (102)
18 2do3_A Transcription elongatio 77.6 1.1 3.9E-05 22.0 1.4 19 43-61 15-33 (69)
19 3s3l_A CERJ; acyltransferase, 74.9 4 0.00014 25.4 3.7 24 33-56 301-324 (357)
20 3oug_A Aspartate 1-decarboxyla 74.4 1.8 6.3E-05 23.2 1.8 14 44-57 80-93 (114)
21 3r8s_U 50S ribosomal protein L 73.8 1.6 5.3E-05 23.0 1.4 15 45-59 3-17 (102)
22 4ewp_A 3-oxoacyl-[acyl-carrier 73.6 2.8 9.6E-05 25.8 2.8 26 31-56 310-335 (350)
23 3j21_U 50S ribosomal protein L 73.5 1.5 5.1E-05 23.8 1.4 16 44-59 44-59 (121)
24 3v2d_Y 50S ribosomal protein L 73.0 1.6 5.6E-05 23.3 1.4 15 45-59 6-20 (110)
25 1vq8_T 50S ribosomal protein L 72.7 1.7 5.9E-05 23.5 1.5 22 39-60 36-57 (120)
26 1pqh_A Aspartate 1-decarboxyla 72.0 2.4 8.3E-05 23.6 2.0 14 43-56 93-106 (143)
27 2c45_A Aspartate 1-decarboxyla 70.8 2.7 9.3E-05 23.3 2.0 14 43-56 76-89 (139)
28 3s21_A 3-oxoacyl-[ACP] synthas 69.3 5.2 0.00018 24.6 3.3 26 31-56 306-331 (345)
29 2zkr_t 60S ribosomal protein L 69.2 2.5 8.5E-05 23.7 1.6 17 45-61 48-64 (145)
30 3u5e_Y L33, YL33, 60S ribosoma 69.0 2.3 7.9E-05 23.3 1.5 20 41-60 45-64 (127)
31 3bbo_W Ribosomal protein L24; 68.7 3 0.0001 24.4 2.0 18 46-63 69-87 (191)
32 2zjr_R 50S ribosomal protein L 68.3 1.7 5.9E-05 23.3 0.9 15 45-59 15-29 (115)
33 3iz5_Y 60S ribosomal protein L 65.8 2.7 9.3E-05 23.7 1.4 16 45-60 48-63 (150)
34 3zu3_A Putative reductase YPO4 65.5 9.1 0.00031 24.8 3.9 33 27-59 24-56 (405)
35 4a17_S RPL26, 60S ribosomal pr 65.4 3 0.0001 23.1 1.5 18 43-60 46-63 (135)
36 1qau_A Neuronal nitric oxide s 65.0 3.6 0.00012 21.0 1.7 19 41-59 40-58 (112)
37 1va8_A Maguk P55 subfamily mem 64.8 3.6 0.00012 21.2 1.7 21 40-60 61-81 (113)
38 1hnj_A Beta-ketoacyl-acyl carr 64.7 10 0.00035 22.8 3.9 25 33-57 280-304 (317)
39 2ejy_A 55 kDa erythrocyte memb 63.9 4.8 0.00016 20.5 2.0 21 40-60 49-69 (97)
40 1t57_A Conserved protein MTH16 63.1 15 0.00051 21.7 4.2 24 38-61 154-177 (206)
41 2e6z_A Transcription elongatio 62.1 3.2 0.00011 19.4 1.1 17 45-61 7-23 (59)
42 1nz9_A Transcription antitermi 61.5 3.4 0.00012 19.0 1.1 17 45-61 4-20 (58)
43 2vwr_A Ligand of NUMB protein 60.1 5.2 0.00018 19.7 1.7 20 41-60 43-62 (95)
44 2q9v_A Membrane-associated gua 59.9 5.2 0.00018 19.4 1.7 20 41-60 41-60 (90)
45 2la8_A Inactivation-NO-after-p 58.7 6.9 0.00023 20.0 2.1 19 42-60 40-58 (106)
46 2vsp_A PDZ domain-containing p 58.0 7.7 0.00026 18.9 2.2 20 40-60 40-59 (91)
47 2qg1_A Multiple PDZ domain pro 57.8 5.9 0.0002 19.3 1.7 20 41-60 43-62 (92)
48 2i04_A Membrane-associated gua 57.7 6.1 0.00021 19.0 1.7 19 42-60 40-58 (85)
49 2x3e_A 3-oxoacyl-[acyl-carrier 57.5 16 0.00055 22.1 3.9 24 33-56 286-309 (331)
50 1xpm_A 3-hydroxy-3-methylgluta 57.5 11 0.00038 23.7 3.3 25 32-56 280-304 (396)
51 2q3g_A PDZ and LIM domain prot 57.4 8.1 0.00028 18.7 2.2 18 41-59 41-58 (89)
52 1d5g_A Human phosphatase HPTP1 56.7 8.9 0.0003 18.8 2.3 20 41-60 47-66 (96)
53 2uzc_A Human pdlim5, PDZ and L 56.2 8.7 0.0003 18.5 2.2 19 41-60 41-59 (88)
54 1g9o_A NHE-RF; PDZ domain, com 55.7 8.9 0.0003 18.6 2.2 20 40-60 40-59 (91)
55 3o46_A Maguk P55 subfamily mem 55.3 6.8 0.00023 19.2 1.7 19 42-60 43-61 (93)
56 3e17_A Tight junction protein 55.1 7.1 0.00024 19.1 1.7 20 41-60 35-54 (88)
57 2d92_A INAD-like protein; PDZ 54.7 8.8 0.0003 19.5 2.1 21 40-60 57-77 (108)
58 1u0m_A Putative polyketide syn 54.6 14 0.00046 23.1 3.3 26 32-57 316-341 (382)
59 2db5_A INAD-like protein; PDZ 54.4 11 0.00039 19.6 2.6 21 40-60 67-87 (128)
60 3cyy_A Tight junction protein 54.0 11 0.00037 18.2 2.3 20 41-60 37-56 (92)
61 1mzj_A Beta-ketoacylsynthase I 53.6 15 0.00052 22.3 3.3 24 33-56 294-317 (339)
62 1wha_A KIAA0147 protein, scrib 53.2 9.6 0.00033 19.1 2.1 20 41-60 52-71 (105)
63 2i1n_A Discs, large homolog 3; 53.1 7.8 0.00027 19.3 1.7 20 41-60 48-67 (102)
64 1m5z_A GRIP, AMPA receptor int 53.0 7.3 0.00025 18.9 1.6 17 43-60 48-64 (91)
65 2pkt_A PDZ and LIM domain prot 53.0 10 0.00036 18.4 2.2 19 41-60 41-59 (91)
66 1nf3_C PAR-6B; semi-CRIB motif 52.8 7.6 0.00026 20.4 1.7 21 40-60 78-98 (128)
67 1ueq_A Membrane associated gua 52.8 11 0.00039 19.5 2.4 20 40-59 57-76 (123)
68 2ego_A General receptor for ph 52.6 11 0.00036 18.6 2.2 20 40-60 50-69 (96)
69 1n7e_A AMPA receptor interacti 52.3 8.1 0.00028 19.1 1.7 19 42-60 45-63 (97)
70 1wzo_A HPCE; structural genomi 52.2 23 0.00078 21.0 3.9 26 34-61 193-218 (246)
71 1um7_A Synapse-associated prot 52.2 14 0.00048 18.6 2.7 20 41-60 53-72 (113)
72 2f5y_A Regulator of G-protein 52.1 7.8 0.00027 18.9 1.6 18 42-60 39-56 (91)
73 2opg_A Multiple PDZ domain pro 52.0 8.4 0.00029 19.0 1.7 19 42-60 45-63 (98)
74 2fe5_A Presynaptic protein SAP 51.9 8.5 0.00029 18.8 1.7 18 43-60 49-66 (94)
75 2r4h_A Membrane-associated gua 51.8 11 0.00039 19.2 2.3 21 40-60 62-82 (112)
76 3r68_A Na(+)/H(+) exchange reg 51.2 6 0.0002 19.4 1.1 19 41-60 43-61 (95)
77 1wif_A RSGI RUH-020, riken cDN 51.2 10 0.00035 20.3 2.0 21 40-60 62-82 (126)
78 3cbz_A Dishevelled-2; PDZ doma 51.1 8.7 0.0003 19.5 1.7 19 41-59 47-65 (108)
79 2jil_A GRIP1 protein, glutamat 51.1 8.9 0.0003 18.8 1.7 19 41-59 46-64 (97)
80 3ngh_A PDZ domain-containing p 50.9 11 0.00039 18.8 2.2 20 40-60 39-58 (106)
81 3s8m_A Enoyl-ACP reductase; ro 50.6 30 0.001 22.5 4.4 32 28-59 39-70 (422)
82 3sfj_A TAX1-binding protein 3; 50.5 8.4 0.00029 19.2 1.6 20 40-60 58-77 (104)
83 2iwn_A Multiple PDZ domain pro 50.4 9.2 0.00032 18.6 1.7 18 43-60 49-66 (97)
84 2jik_A Synaptojanin-2 binding 50.4 9.9 0.00034 18.9 1.8 19 42-60 52-70 (101)
85 2rcz_A Tight junction protein 50.2 9.5 0.00032 17.8 1.7 17 43-59 37-53 (81)
86 2eaq_A LIM domain only protein 50.1 12 0.00042 18.0 2.2 19 41-60 42-60 (90)
87 2e7k_A Maguk P55 subfamily mem 50.1 9.5 0.00032 18.7 1.7 19 42-60 44-62 (91)
88 2v90_A PDZ domain-containing p 50.1 9 0.00031 18.8 1.7 20 40-60 43-62 (96)
89 1um1_A KIAA1849 protein, RSGI 50.0 11 0.00039 19.0 2.1 20 41-60 50-69 (110)
90 1ihj_A INAD; intermolecular di 50.0 9.6 0.00033 18.7 1.7 20 41-60 51-70 (98)
91 3l4f_D SH3 and multiple ankyri 49.9 9.5 0.00032 20.3 1.8 19 40-59 78-96 (132)
92 2eeg_A PDZ and LIM domain prot 49.8 12 0.00043 18.3 2.2 18 42-60 47-64 (94)
93 3h78_A PQS biosynthetic enzyme 49.6 11 0.00038 23.4 2.3 22 33-56 316-337 (359)
94 1q3o_A Shank1; PDZ, GKAP, pept 49.5 12 0.00042 18.8 2.2 19 41-60 59-77 (109)
95 4efi_A 3-oxoacyl-(acyl-carrier 49.5 2 6.8E-05 26.7 -1.1 25 32-56 305-329 (354)
96 2o2t_A Multiple PDZ domain pro 49.5 9.5 0.00032 19.5 1.7 21 40-60 62-82 (117)
97 4amh_A Disks large homolog 1; 49.4 9.6 0.00033 19.3 1.7 19 41-59 46-64 (106)
98 2awx_A Synapse associated prot 49.4 9.7 0.00033 19.1 1.7 20 41-60 47-66 (105)
99 2kv8_A RGS12, regulator of G-p 49.4 7.2 0.00024 18.6 1.2 18 42-60 38-55 (83)
100 1wf7_A Enigma homologue protei 49.3 12 0.00041 18.7 2.1 19 41-60 43-61 (103)
101 2l8k_A NSP7, non-structural pr 49.3 7.9 0.00027 21.0 1.4 16 43-58 74-89 (123)
102 2fcf_A Multiple PDZ domain pro 49.2 9.8 0.00033 18.9 1.7 20 41-60 53-72 (103)
103 1wf8_A Neurabin-I; PDZ domain, 49.1 9.5 0.00033 19.2 1.7 19 41-59 54-72 (107)
104 1v8d_A Hypothetical protein (T 49.0 15 0.00052 22.0 2.7 29 30-58 44-72 (235)
105 2jxo_A Ezrin-radixin-moesin-bi 48.9 9.2 0.00032 18.9 1.6 19 41-60 47-65 (98)
106 1wfv_A Membrane associated gua 48.9 10 0.00035 18.8 1.8 19 42-60 51-69 (103)
107 1y7n_A Amyloid beta A4 precurs 48.9 9 0.00031 18.9 1.5 19 41-60 45-63 (90)
108 1v5q_A GRIP1 homolog, glutamat 48.6 13 0.00044 19.3 2.2 20 40-59 58-77 (122)
109 2b25_A Hypothetical protein; s 48.6 10 0.00034 23.0 2.0 16 42-57 6-21 (336)
110 2kpk_A Membrane-associated gua 48.6 10 0.00035 19.9 1.8 21 40-60 56-76 (129)
111 1saw_A Hypothetical protein FL 48.4 22 0.00076 20.7 3.4 25 35-61 172-196 (225)
112 3v4n_A HMG-COA synthase; hydro 48.3 20 0.00067 22.7 3.3 25 32-56 285-310 (388)
113 2w4f_A Protein LAP4; structura 48.2 9.7 0.00033 18.7 1.6 19 41-60 48-66 (97)
114 2he4_A Na(+)/H(+) exchange reg 48.1 9.8 0.00034 18.4 1.6 19 41-60 42-60 (90)
115 1wi4_A Synip, syntaxin binding 48.0 12 0.0004 19.1 1.9 20 40-59 54-73 (109)
116 1b8q_A Protein (neuronal nitri 47.8 5.5 0.00019 20.8 0.6 19 41-59 47-65 (127)
117 2eno_A Synaptojanin-2-binding 47.6 15 0.00052 18.9 2.4 21 40-60 60-80 (120)
118 2wte_A CSA3; antiviral protein 47.6 27 0.00091 20.7 3.7 24 35-59 21-44 (244)
119 3khf_A Microtubule-associated 47.6 10 0.00034 18.8 1.6 19 41-60 48-66 (99)
120 1uep_A Membrane associated gua 47.4 9.1 0.00031 19.2 1.4 20 41-60 48-67 (103)
121 2djt_A Unnamed protein product 47.4 10 0.00036 18.9 1.7 19 42-60 53-71 (104)
122 1v62_A KIAA1719 protein; struc 47.3 10 0.00034 19.6 1.6 20 41-60 56-75 (117)
123 2dfu_A Probable 2-hydroxyhepta 47.2 30 0.001 20.8 3.9 26 34-61 207-232 (264)
124 2iwq_A Multiple PDZ domain pro 47.0 11 0.00037 19.8 1.7 21 40-60 72-92 (123)
125 2byg_A Channel associated prot 46.7 12 0.00041 19.4 1.8 19 41-59 68-86 (117)
126 3qe1_A Sorting nexin-27, G pro 46.7 10 0.00035 19.0 1.6 19 41-60 57-75 (107)
127 2vsv_A Rhophilin-2; scaffold p 46.6 15 0.0005 19.0 2.2 19 41-60 58-76 (109)
128 2koj_A Partitioning defective 46.3 12 0.0004 18.9 1.8 19 42-60 54-72 (111)
129 3axa_A Afadin, nectin-3, prote 46.2 12 0.0004 18.8 1.7 20 41-60 52-71 (106)
130 2fne_A Multiple PDZ domain pro 46.1 11 0.00039 19.5 1.7 19 41-59 67-85 (117)
131 2d8i_A T-cell lymphoma invasio 46.1 12 0.00042 19.4 1.8 18 41-59 58-75 (114)
132 1ted_A PKS18; thiolase fold, s 46.0 24 0.00082 22.0 3.4 26 31-56 350-376 (393)
133 1wh1_A KIAA1095 protein; PDZ d 46.0 20 0.00069 18.6 2.7 20 40-59 61-80 (124)
134 2dlu_A INAD-like protein; PDZ 45.8 14 0.00049 18.6 2.1 18 43-60 54-71 (111)
135 3nfk_A Tyrosine-protein phosph 45.6 17 0.00057 18.2 2.3 20 40-59 56-76 (107)
136 2jre_A C60-1 PDZ domain peptid 45.4 8.5 0.00029 19.4 1.1 19 42-60 59-77 (108)
137 2gzv_A PRKCA-binding protein; 45.3 12 0.00041 19.3 1.7 19 42-60 65-83 (114)
138 1zow_A 3-oxoacyl-[acyl-carrier 45.2 33 0.0011 20.4 3.9 25 33-57 274-298 (313)
139 1wid_A DNA-binding protein RAV 45.1 19 0.00066 19.2 2.6 21 37-58 84-104 (130)
140 3sqz_A Putative hydroxymethylg 45.0 23 0.0008 22.8 3.3 24 33-56 316-340 (425)
141 1q7x_A PDZ2B domain of PTP-BAS 44.8 12 0.00041 18.8 1.6 19 42-60 57-75 (108)
142 3mvn_A UDP-N-acetylmuramate:L- 44.8 24 0.00081 19.3 3.0 20 35-56 127-146 (163)
143 2g5m_B Neurabin-2; spinophilin 44.8 12 0.0004 19.0 1.6 20 41-60 49-68 (113)
144 2dm8_A INAD-like protein; PDZ 44.7 12 0.00042 19.0 1.7 19 42-60 58-76 (116)
145 2qkv_A Inactivation-NO-after-p 44.7 5.9 0.0002 19.7 0.4 18 43-60 47-64 (96)
146 3tbh_A O-acetyl serine sulfhyd 44.6 43 0.0015 20.6 4.4 27 31-57 53-79 (334)
147 1ujd_A KIAA0559 protein; PDZ d 44.5 12 0.00042 19.2 1.7 21 40-60 62-82 (117)
148 3b76_A E3 ubiquitin-protein li 44.4 14 0.00047 19.3 1.9 20 40-59 66-85 (118)
149 1wfg_A Regulating synaptic mem 44.4 17 0.00058 19.2 2.3 21 40-60 78-98 (131)
150 3hpk_A Protein interacting wit 44.2 13 0.00044 19.3 1.7 21 40-60 58-78 (125)
151 2yvl_A TRMI protein, hypotheti 44.2 12 0.00042 21.2 1.8 13 44-56 2-14 (248)
152 2pa1_A PDZ and LIM domain prot 43.9 18 0.00061 17.3 2.2 18 42-60 41-58 (87)
153 3tsv_A Tight junction protein 43.7 13 0.00043 19.6 1.7 19 40-59 64-82 (124)
154 2vl6_A SSO MCM N-TER, minichro 43.7 15 0.00051 21.9 2.2 14 44-57 223-236 (268)
155 2w5q_A Processed glycerol phos 43.5 45 0.0015 21.0 4.4 29 29-59 231-259 (424)
156 2akl_A PHNA-like protein PA012 43.3 17 0.00058 20.1 2.1 17 44-60 75-91 (138)
157 2dmz_A INAD-like protein; PDZ 43.0 15 0.00051 19.1 1.9 20 41-60 60-79 (129)
158 3i4w_A Disks large homolog 4; 42.9 10 0.00035 18.8 1.2 20 40-59 48-67 (104)
159 1zjc_A Aminopeptidase AMPS; me 42.7 50 0.0017 21.3 4.6 33 26-58 4-37 (418)
160 2daz_A INAD-like protein; PDZ 42.6 12 0.00042 19.4 1.5 20 41-60 65-84 (124)
161 3jxo_A TRKA-N domain protein; 42.2 16 0.00056 17.5 1.9 14 44-57 59-72 (86)
162 2ebd_A 3-oxoacyl-[acyl-carrier 41.7 34 0.0012 20.3 3.5 25 33-57 272-296 (309)
163 1x5q_A LAP4 protein; PDZ domai 41.7 14 0.00047 18.6 1.6 19 41-60 60-78 (110)
164 2dls_A PDZ-rhogef, RHO guanine 41.3 11 0.00037 18.5 1.1 19 41-60 43-61 (93)
165 1ltl_A DNA replication initiat 41.1 17 0.00058 21.9 2.1 14 44-57 210-223 (279)
166 2ehr_A INAD-like protein; PDZ 40.9 14 0.00049 18.8 1.6 20 41-60 64-83 (117)
167 1uez_A KIAA1526 protein; PDZ d 40.9 13 0.00044 18.4 1.4 18 42-60 50-67 (101)
168 1i9g_A Hypothetical protein RV 40.8 29 0.001 20.1 3.1 15 43-57 4-18 (280)
169 2w8d_A Processed glycerol phos 40.7 59 0.002 20.6 4.7 30 29-60 231-260 (436)
170 2eeh_A PDZ domain-containing p 40.7 14 0.00049 18.3 1.5 20 40-60 49-68 (100)
171 3ca8_A Protein YDCF; two domai 40.4 57 0.0019 19.6 4.3 33 23-57 120-152 (266)
172 2kom_A Partitioning defective 40.3 15 0.0005 19.1 1.6 19 42-60 73-91 (121)
173 4ham_A LMO2241 protein; struct 40.3 30 0.001 18.2 2.8 23 30-52 16-38 (134)
174 2edz_A PDZ domain-containing p 40.3 16 0.00054 18.6 1.7 19 41-60 52-70 (114)
175 1x6d_A Interleukin-16; PDZ dom 39.3 9.1 0.00031 19.7 0.6 20 40-59 55-74 (119)
176 2d90_A PDZ domain containing p 39.3 16 0.00054 18.1 1.6 19 41-60 44-62 (102)
177 1wi2_A Riken cDNA 2700099C19; 38.8 16 0.00056 18.2 1.6 18 42-60 56-73 (104)
178 1whd_A RGS3, regulator of G-pr 38.8 16 0.00054 18.1 1.5 17 43-60 52-68 (100)
179 1vp8_A Hypothetical protein AF 38.8 60 0.002 19.1 5.3 33 28-61 123-170 (201)
180 2i6v_A General secretion pathw 38.6 24 0.00083 17.0 2.2 18 41-59 33-50 (87)
181 2vz5_A TAX1-binding protein 3; 38.4 16 0.00055 19.6 1.6 19 40-59 77-95 (139)
182 2dgy_A MGC11102 protein; EIF-1 38.2 17 0.00057 19.3 1.6 15 42-56 50-64 (111)
183 2yt7_A Amyloid beta A4 precurs 38.1 19 0.00067 17.8 1.8 17 44-60 54-70 (101)
184 2qzu_A Putative sulfatase YIDJ 38.1 78 0.0027 20.2 5.1 29 29-59 286-314 (491)
185 1ub7_A 3-oxoacyl-[acyl-carrier 38.0 35 0.0012 20.4 3.2 22 36-57 285-306 (322)
186 1v6b_A Harmonin isoform A1; st 37.8 24 0.00081 18.2 2.2 20 41-60 57-76 (118)
187 2eei_A PDZ domain-containing p 37.4 13 0.00043 18.6 1.0 18 42-60 47-64 (106)
188 1tp5_A Presynaptic density pro 37.4 14 0.00047 18.9 1.2 19 42-60 53-71 (119)
189 3kzd_A TIAM-1, T-lymphoma inva 37.3 26 0.00087 17.8 2.2 19 40-59 48-66 (94)
190 1gtt_A 4-hydroxyphenylacetate 37.2 49 0.0017 21.3 3.9 26 34-61 373-398 (429)
191 2kjd_A Sodium/hydrogen exchang 37.1 18 0.0006 18.7 1.6 18 41-59 47-64 (128)
192 1mhx_A Immunoglobulin-binding 36.7 20 0.00067 16.9 1.5 13 45-57 15-27 (65)
193 1uit_A Human discs large 5 pro 36.2 13 0.00046 18.9 1.0 16 43-59 58-73 (117)
194 1wy5_A TILS, hypothetical UPF0 36.0 51 0.0017 20.0 3.7 28 30-57 5-33 (317)
195 2joi_A Hypothetical protein TA 35.8 38 0.0013 18.2 2.7 47 10-58 12-63 (118)
196 1rgw_A ZAsp protein; PDZ, cyph 35.8 27 0.00092 16.5 2.1 17 43-60 41-57 (85)
197 2phn_A F420-0:gamma-glutamyl l 35.5 29 0.00099 21.1 2.5 18 41-58 28-45 (254)
198 2dkr_A LIN-7 homolog B; LIN-7B 35.2 21 0.00072 17.2 1.6 18 43-60 46-63 (93)
199 1p1d_A PDZ45, glutamate recept 34.7 30 0.001 19.3 2.4 20 41-60 50-69 (196)
200 3k1r_A Harmonin; protein-prote 34.7 20 0.00069 20.1 1.7 19 40-59 123-141 (192)
201 1x5n_A Harmonin; PDZ domain, u 34.6 16 0.00056 18.5 1.2 18 42-60 56-73 (114)
202 1jt8_A EIF-1A, probable transl 34.5 16 0.00055 19.1 1.1 15 41-55 54-68 (102)
203 4fdi_A N-acetylgalactosamine-6 34.4 54 0.0018 21.1 3.8 29 29-59 235-263 (502)
204 2x0j_A Malate dehydrogenase; o 34.3 27 0.00094 21.3 2.3 20 46-65 67-86 (294)
205 2w5v_A Alkaline phosphatase; p 34.2 51 0.0017 20.4 3.5 27 28-59 276-302 (375)
206 3ov2_A Curcumin synthase; type 34.1 62 0.0021 20.4 3.9 15 42-56 355-372 (393)
207 3egg_C Spinophilin; PP1, serin 34.0 24 0.0008 19.7 1.8 19 41-59 125-143 (170)
208 3id1_A Regulator of sigma E pr 33.9 31 0.0011 17.0 2.2 18 41-59 16-33 (95)
209 1qav_A Alpha-1 syntrophin (res 33.9 25 0.00085 16.9 1.8 19 42-60 45-63 (90)
210 3onr_A Protein transport prote 33.9 36 0.0012 16.6 2.3 29 14-42 3-31 (72)
211 1ufx_A KIAA1526 protein; PDZ d 33.7 13 0.00044 18.8 0.7 20 40-59 45-64 (103)
212 1qd7_I S17 ribosomal protein; 33.6 32 0.0011 17.5 2.1 17 44-60 48-64 (89)
213 1uju_A Scribble; PDZ domain, c 33.6 11 0.00037 19.1 0.4 20 40-59 57-76 (111)
214 3etc_A AMP-binding protein; ad 33.5 68 0.0023 21.0 4.2 29 29-58 92-120 (580)
215 1kwa_A Hcask/LIN-2 protein; PD 33.4 25 0.00084 17.0 1.7 16 44-59 42-57 (88)
216 3ffy_A Putative tetrapyrrole ( 33.3 54 0.0018 17.0 3.6 24 33-58 90-113 (115)
217 1fsu_A N-acetylgalactosamine-4 33.2 59 0.002 20.8 3.8 29 29-59 232-260 (492)
218 3gsl_A Disks large homolog 4; 33.1 23 0.00079 19.4 1.7 21 40-60 143-163 (196)
219 1bja_A Transcription regulator 33.1 40 0.0014 17.3 2.5 25 31-55 46-71 (95)
220 1uf1_A KIAA1526 protein; PDZ d 33.0 22 0.00076 18.4 1.6 18 42-60 61-78 (128)
221 3r8n_Q 30S ribosomal protein S 32.9 25 0.00087 17.5 1.7 16 44-59 48-63 (80)
222 3v7i_A Putative polyketide syn 32.3 32 0.0011 22.0 2.5 24 32-56 375-398 (413)
223 3t5a_A Long-chain-fatty-acid-- 32.3 59 0.002 20.3 3.7 27 30-58 65-91 (480)
224 1hdh_A Arylsulfatase; hydrolas 31.7 62 0.0021 20.9 3.7 30 28-59 289-318 (536)
225 1o54_A SAM-dependent O-methylt 31.4 33 0.0011 20.0 2.3 19 40-58 14-32 (277)
226 2z17_A Pleckstrin homology SEC 31.2 14 0.00046 18.5 0.5 18 41-59 62-79 (104)
227 2akk_A RP4479, PHNA-like prote 31.1 27 0.00091 17.3 1.5 16 44-59 11-26 (74)
228 3ed4_A Arylsulfatase; structur 31.0 58 0.002 20.8 3.5 30 28-59 276-305 (502)
229 1auk_A Arylsulfatase A; cerebr 30.8 68 0.0023 20.6 3.8 29 29-59 236-264 (489)
230 1wg6_A Hypothetical protein (r 30.5 14 0.00049 19.3 0.5 18 42-59 70-87 (127)
231 3tla_A MCCF; serine protease, 30.4 17 0.00058 23.1 0.9 27 32-58 26-52 (371)
232 2kl0_A Putative thiamin biosyn 30.4 43 0.0015 16.0 2.2 17 43-59 47-63 (73)
233 2ki8_A Tungsten formylmethanof 30.0 38 0.0013 18.3 2.2 19 39-58 61-79 (146)
234 1zuy_A Myosin-5 isoform; SH3 d 30.0 35 0.0012 14.8 1.8 13 46-58 20-32 (58)
235 1ng7_A Poliovirus 3A-N, genome 29.9 32 0.0011 16.3 1.6 15 34-48 32-46 (60)
236 1w9e_A Syntenin 1; cell adhesi 29.9 37 0.0012 18.4 2.2 18 42-60 42-59 (166)
237 2l8n_A Transcriptional repress 29.8 37 0.0013 15.9 1.9 41 6-46 12-54 (67)
238 1iz0_A Quinone oxidoreductase; 29.7 47 0.0016 19.6 2.8 23 34-57 112-134 (302)
239 2a28_A BZZ1 protein; SH3 domai 29.1 38 0.0013 14.6 1.8 13 46-58 19-31 (54)
240 2vqr_A Putative sulfatase; pho 28.6 86 0.003 20.3 4.0 30 28-59 325-354 (543)
241 1vk8_A Hypothetical protein TM 28.6 60 0.0021 16.9 2.7 26 18-45 22-47 (106)
242 1uhp_A Hypothetical protein KI 28.4 45 0.0015 16.6 2.2 20 41-60 55-74 (107)
243 4b7c_A Probable oxidoreductase 28.2 54 0.0019 19.7 2.9 25 33-57 134-158 (336)
244 3lxq_A Uncharacterized protein 28.1 63 0.0022 20.3 3.3 29 29-59 278-306 (450)
245 2k9x_A Tburm1, uncharacterized 28.0 49 0.0017 17.3 2.3 12 46-57 87-98 (110)
246 1u6e_A 3-oxoacyl-[acyl-carrier 27.9 58 0.002 19.5 3.0 24 34-57 296-319 (335)
247 1k4u_S Phagocyte NADPH oxidase 27.9 38 0.0013 15.0 1.8 12 46-57 24-35 (62)
248 1gcq_C VAV proto-oncogene; SH3 27.8 39 0.0013 15.4 1.8 12 46-57 29-40 (70)
249 1p49_A Steryl-sulfatase; stero 27.8 80 0.0027 20.6 3.8 29 29-59 294-322 (562)
250 2bz8_A SH3-domain kinase bindi 27.7 41 0.0014 14.7 1.8 13 46-58 20-32 (58)
251 3mb5_A SAM-dependent methyltra 27.3 34 0.0012 19.5 1.8 13 45-57 1-13 (255)
252 3b5q_A Putative sulfatase YIDJ 27.3 76 0.0026 20.3 3.6 30 28-59 256-285 (482)
253 1wj5_A Hypothetical protein (r 27.3 38 0.0013 18.2 1.8 19 29-47 76-94 (120)
254 1yel_A AT1G16640; CESG, protei 27.3 41 0.0014 17.0 2.0 18 38-56 71-88 (104)
255 4e6r_A Cytoplasmic protein NCK 27.2 42 0.0014 14.5 1.8 14 45-58 19-32 (58)
256 3bpu_A Membrane-associated gua 27.2 32 0.0011 16.4 1.5 16 45-60 42-57 (88)
257 2kjp_A Uncharacterized protein 27.1 38 0.0013 16.6 1.8 15 44-59 17-31 (91)
258 1sem_A SEM-5; SRC-homology 3 ( 27.1 42 0.0014 14.6 1.8 13 46-58 21-33 (58)
259 2yuy_A RHO GTPase activating p 27.1 16 0.00055 19.0 0.4 18 41-59 75-92 (126)
260 4h7p_A Malate dehydrogenase; s 27.1 45 0.0016 20.9 2.4 20 46-65 98-117 (345)
261 2iim_A Proto-oncogene tyrosine 27.0 42 0.0014 14.9 1.8 12 46-57 25-36 (62)
262 1jo8_A ABP1P, actin binding pr 27.0 42 0.0015 14.6 1.8 12 46-57 19-30 (58)
263 2g6f_X RHO guanine nucleotide 27.0 42 0.0014 14.7 1.8 12 46-57 23-34 (59)
264 2gdt_A Leader protein; P65 hom 26.7 58 0.002 17.3 2.4 47 12-58 4-64 (116)
265 1yn8_A NBP2, NAP1-binding prot 26.7 43 0.0015 14.6 1.8 12 46-57 20-31 (59)
266 3i18_A LMO2051 protein; alpha- 26.6 40 0.0014 16.7 1.8 14 46-59 24-37 (100)
267 2gnc_A SLIT-ROBO RHO GTPase-ac 26.5 44 0.0015 14.8 1.8 12 46-57 25-36 (60)
268 2rcf_A Unidentified carboxysom 26.5 45 0.0016 17.0 2.0 14 46-59 44-57 (91)
269 2edv_A FERM and PDZ domain-con 26.5 40 0.0014 16.5 1.8 17 44-60 46-62 (96)
270 3jx9_A Putative phosphoheptose 26.4 49 0.0017 18.6 2.3 14 45-58 74-87 (170)
271 1d7q_A Translation initiation 26.4 35 0.0012 18.9 1.6 16 41-56 65-80 (143)
272 2cs5_A Tyrosine-protein phosph 26.3 45 0.0015 16.9 2.0 17 44-60 59-75 (119)
273 4h1h_A LMO1638 protein; MCCF-l 26.1 34 0.0012 21.1 1.7 14 45-58 8-21 (327)
274 4dsg_A UDP-galactopyranose mut 26.0 49 0.0017 21.2 2.5 27 27-53 361-387 (484)
275 1uti_A GRB2-related adaptor pr 26.0 46 0.0016 14.5 1.8 12 46-57 20-31 (58)
276 2v1q_A SLA1, cytoskeleton asse 26.0 45 0.0016 14.6 1.8 12 46-57 21-32 (60)
277 1uj0_A Signal transducing adap 25.9 45 0.0015 14.8 1.8 12 46-57 24-35 (62)
278 1cka_A C-CRK N-terminal SH3 do 25.8 46 0.0016 14.4 1.8 13 46-58 20-32 (57)
279 1y0m_A 1-phosphatidylinositol- 25.8 46 0.0016 14.7 1.8 12 46-57 22-33 (61)
280 2vqe_Q 30S ribosomal protein S 25.8 48 0.0016 17.4 2.0 16 44-59 49-64 (105)
281 2i4s_A General secretion pathw 25.6 34 0.0012 17.1 1.5 17 43-60 53-69 (105)
282 4fuq_A Malonyl COA synthetase; 25.6 1.1E+02 0.0038 19.4 4.1 28 30-58 35-62 (503)
283 2kaf_A Non-structural protein 25.5 15 0.00053 17.3 0.1 11 45-55 32-42 (67)
284 2oaw_A Spectrin alpha chain, b 25.5 46 0.0016 14.8 1.8 13 46-58 20-32 (65)
285 3o83_A Peptide arylation enzym 25.5 98 0.0034 19.9 3.9 28 30-58 62-89 (544)
286 1zlm_A Osteoclast stimulating 25.5 47 0.0016 14.5 1.8 12 46-57 22-33 (58)
287 3r0h_A INAD, inactivation-NO-a 25.5 40 0.0014 18.7 1.8 20 40-59 58-77 (206)
288 4gr5_A Non-ribosomal peptide s 25.5 1.1E+02 0.0038 19.8 4.1 28 30-58 107-134 (570)
289 2jte_A CD2-associated protein; 25.5 46 0.0016 14.8 1.8 12 46-57 25-36 (64)
290 2bzy_A CRK-like protein, CRKL 25.4 46 0.0016 15.1 1.8 12 46-57 22-33 (67)
291 2lj0_A Sorbin and SH3 domain-c 25.4 47 0.0016 15.4 1.8 12 46-57 25-36 (65)
292 2iwo_A Multiple PDZ domain pro 25.3 43 0.0015 17.3 1.8 17 43-59 69-85 (120)
293 2j05_A RAS GTPase-activating p 25.1 47 0.0016 14.9 1.8 12 46-57 25-36 (65)
294 2xhz_A KDSD, YRBH, arabinose 5 25.1 56 0.0019 17.6 2.4 16 43-58 91-106 (183)
295 3kzf_A Carbamate kinase; argin 25.1 49 0.0017 20.7 2.3 24 33-58 33-56 (317)
296 2drm_A Acanthamoeba myosin IB; 25.0 49 0.0017 14.4 1.8 13 46-58 22-34 (58)
297 1oot_A Hypothetical 40.4 kDa p 25.0 48 0.0017 14.5 1.8 13 46-58 22-34 (60)
298 3f6t_A Aspartate aminotransfer 25.0 1.1E+02 0.0038 19.8 4.1 29 29-57 173-201 (533)
299 2v7b_A Benzoate-coenzyme A lig 24.9 1.2E+02 0.004 19.4 4.1 28 30-58 55-82 (529)
300 4fib_A Uncharacterized protein 24.9 63 0.0021 17.6 2.4 21 46-66 1-22 (129)
301 1t5h_X 4-chlorobenzoyl COA lig 24.9 1.2E+02 0.004 19.2 4.1 28 30-58 36-63 (504)
302 3rnj_A Brain-specific angiogen 24.9 37 0.0013 15.4 1.4 12 46-57 27-38 (67)
303 3c1d_A Protein ORAA, regulator 24.8 72 0.0025 17.4 2.8 20 29-48 45-64 (159)
304 1v25_A Long-chain-fatty-acid-C 24.8 1.3E+02 0.0043 19.4 4.3 28 30-58 54-81 (541)
305 3mlq_E Transcription-repair co 24.7 16 0.00053 17.7 0.0 11 44-54 1-11 (71)
306 1zx6_A YPR154WP; SH3 domain, p 24.7 50 0.0017 14.4 1.8 12 46-57 21-32 (58)
307 4gde_A UDP-galactopyranose mut 24.7 88 0.003 19.6 3.5 29 27-55 385-413 (513)
308 2j6f_A CD2-associated protein; 24.6 49 0.0017 14.7 1.8 12 46-57 20-31 (62)
309 1k1z_A VAV; SH3, proto-oncogen 24.6 47 0.0016 15.5 1.8 12 46-57 37-48 (78)
310 2vwf_A Growth factor receptor- 24.6 50 0.0017 14.3 1.8 12 46-57 21-32 (58)
311 3gqw_A Fatty acid AMP ligase; 24.6 1.2E+02 0.0041 19.4 4.2 28 30-58 56-83 (576)
312 2nwm_A Vinexin; cell adhesion; 24.5 49 0.0017 15.1 1.8 12 46-57 20-31 (65)
313 1n8p_A Cystathionine gamma-lya 24.5 73 0.0025 19.6 3.0 21 35-57 81-101 (393)
314 3ihu_A Transcriptional regulat 24.5 94 0.0032 17.5 3.3 26 28-53 16-41 (222)
315 1w1f_A Tyrosine-protein kinase 24.5 49 0.0017 14.7 1.8 12 46-57 26-37 (65)
316 4dup_A Quinone oxidoreductase; 24.5 55 0.0019 19.9 2.5 24 35-58 154-177 (353)
317 3lzk_A Fumarylacetoacetate hyd 24.5 65 0.0022 20.4 2.8 27 33-61 262-288 (359)
318 3p8b_B Transcription antitermi 24.5 30 0.001 18.8 1.1 18 44-61 90-107 (152)
319 1m3s_A Hypothetical protein YC 24.4 60 0.002 17.6 2.4 15 44-58 75-89 (186)
320 3a52_A Cold-active alkaline ph 24.4 1.2E+02 0.004 19.5 4.0 26 29-59 245-270 (400)
321 2fpe_A C-JUN-amino-terminal ki 24.3 51 0.0017 14.6 1.8 12 46-57 22-33 (62)
322 2gcx_A FEOA, ferrous iron tran 24.3 65 0.0022 15.0 2.6 24 36-60 22-45 (75)
323 2xmf_A Myosin 1E SH3; motor pr 24.2 51 0.0017 14.5 1.8 13 46-58 24-36 (60)
324 3e19_A FEOA; transcriptional r 24.2 66 0.0023 15.1 3.8 25 35-60 26-50 (77)
325 2k5l_A FEOA; structure, NESG, 24.2 69 0.0024 15.3 3.2 24 36-60 24-47 (81)
326 1hw1_A FADR, fatty acid metabo 24.2 1.1E+02 0.0036 17.4 3.5 15 33-47 48-62 (239)
327 2cu3_A Unknown function protei 24.1 62 0.0021 14.7 2.3 13 45-57 48-60 (64)
328 3cvj_A Putative phosphoheptose 24.1 71 0.0024 18.3 2.8 15 44-58 104-118 (243)
329 2edp_A Fragment, shroom family 24.1 45 0.0015 16.4 1.7 18 43-60 51-68 (100)
330 3dfg_A Xcrecx, regulatory prot 24.1 76 0.0026 17.4 2.8 20 29-48 47-66 (162)
331 1jeo_A MJ1247, hypothetical pr 24.1 67 0.0023 17.3 2.6 15 44-58 78-92 (180)
332 1ug1_A KIAA1010 protein; struc 24.0 51 0.0017 16.9 1.9 13 46-58 36-48 (92)
333 2px2_A Genome polyprotein [con 24.0 51 0.0017 20.3 2.2 23 37-59 62-84 (269)
334 3r44_A Fatty acyl COA syntheta 23.9 1.3E+02 0.0043 19.3 4.1 28 30-58 50-77 (517)
335 3r6o_A 2-hydroxyhepta-2,4-dien 23.9 1E+02 0.0034 19.4 3.5 28 28-61 260-287 (329)
336 3u23_A CD2-associated protein; 23.9 52 0.0018 14.6 1.8 13 45-57 25-37 (65)
337 3eg3_A Proto-oncogene tyrosine 23.9 52 0.0018 14.5 1.8 12 45-56 23-34 (63)
338 3vc3_A Beta-cyanoalnine syntha 23.9 1.3E+02 0.0046 18.5 4.3 26 33-58 70-95 (344)
339 2epi_A UPF0045 protein MJ1052; 23.8 77 0.0026 16.2 2.6 26 18-45 13-38 (100)
340 3lfh_A Manxa, phosphotransfera 23.8 95 0.0033 16.7 5.1 40 18-59 32-71 (144)
341 2jvv_A Transcription antitermi 23.7 23 0.0008 19.8 0.6 17 45-61 127-143 (181)
342 3rix_A Luciferase, luciferin 4 23.7 95 0.0032 20.0 3.5 28 30-58 57-84 (550)
343 1tg0_A BBC1 protein, myosin ta 23.7 52 0.0018 14.9 1.8 12 46-57 26-37 (68)
344 3g7s_A Long-chain-fatty-acid-- 23.7 1.3E+02 0.0045 19.3 4.2 28 30-58 59-86 (549)
345 4a56_A PULS, pullulanase secre 23.7 84 0.0029 16.1 2.8 21 26-46 29-49 (93)
346 3ivr_A Putative long-chain-fat 23.6 1.3E+02 0.0046 19.0 4.2 28 30-58 38-65 (509)
347 3ic7_A Putative transcriptiona 23.6 75 0.0026 16.5 2.6 22 31-52 14-35 (126)
348 3nx6_A 10KDA chaperonin; bacte 23.6 41 0.0014 17.2 1.5 11 45-55 58-68 (95)
349 2kl1_A YLBL protein; structure 23.5 48 0.0017 16.2 1.8 16 44-60 21-36 (94)
350 3s52_A Putative fumarylacetoac 23.5 77 0.0026 18.4 2.9 29 27-61 169-197 (221)
351 3ni2_A 4-coumarate:COA ligase; 23.4 1.3E+02 0.0044 19.3 4.1 28 30-58 56-83 (536)
352 2jt4_A Cytoskeleton assembly c 23.4 53 0.0018 14.9 1.8 12 46-57 25-36 (71)
353 3sxy_A Transcriptional regulat 23.4 1.1E+02 0.0037 17.2 3.4 23 30-52 14-36 (218)
354 1zuu_A BZZ1 protein; SH3 domai 23.3 50 0.0017 14.3 1.7 13 46-58 20-32 (58)
355 4f14_A Nebulette; SH3 domain, 23.3 54 0.0018 14.4 1.8 14 45-58 24-37 (64)
356 4i1k_A B3 domain-containing tr 23.3 72 0.0025 17.4 2.6 19 38-57 110-128 (146)
357 1x2p_A Protein arginine N-meth 23.2 55 0.0019 14.8 1.9 12 46-57 26-37 (68)
358 2djq_A SH3 domain containing r 23.1 56 0.0019 14.8 1.9 12 46-57 26-37 (68)
359 1we3_O CPN10(groes); chaperoni 23.1 43 0.0015 17.4 1.5 11 45-55 63-73 (100)
360 1ruw_A Myosin-3 isoform, MYO3; 23.1 54 0.0018 14.9 1.8 12 46-57 22-33 (69)
361 3qik_A Phosphatidylinositol 3, 23.1 39 0.0014 17.5 1.4 18 41-59 53-70 (101)
362 3sol_A Type II secretion pathw 23.0 88 0.003 16.1 3.4 21 26-46 29-49 (94)
363 3ngp_A Spectrin alpha chain, b 22.9 56 0.0019 14.3 1.8 14 45-58 24-37 (62)
364 2ibo_A Hypothetical protein SP 22.9 75 0.0026 16.4 2.5 18 28-45 17-34 (104)
365 1pcq_O Groes protein; chaperon 22.8 44 0.0015 17.2 1.5 13 46-58 59-71 (97)
366 2cre_A HEF-like protein; SH3 d 22.8 49 0.0017 15.0 1.6 13 46-58 26-38 (71)
367 2h8e_A Crossover junction endo 22.7 61 0.0021 16.8 2.1 31 26-56 68-98 (120)
368 1wyx_A CRK-associated substrat 22.7 56 0.0019 14.8 1.8 13 46-58 22-34 (69)
369 2qw7_A Carbon dioxide concentr 22.6 59 0.002 17.2 2.0 14 46-59 49-62 (111)
370 3l53_A Putative fumarylacetoac 22.5 83 0.0028 18.4 2.9 29 27-61 167-195 (224)
371 3e3v_A Regulatory protein RECX 22.5 84 0.0029 17.5 2.8 20 29-48 48-67 (177)
372 2dl3_A Sorbin and SH3 domain-c 22.5 57 0.0019 14.7 1.8 12 46-57 26-37 (68)
373 1b07_A Protein (proto-oncogene 22.5 57 0.002 14.8 1.8 12 46-57 22-33 (65)
374 3bbn_Q Ribosomal protein S17; 22.5 55 0.0019 18.2 1.9 17 44-60 106-122 (142)
375 1tuc_A Alpha-spectrin; capping 22.5 58 0.002 14.6 1.8 12 46-57 8-19 (63)
376 3mdo_A Putative phosphoribosyl 22.4 55 0.0019 21.1 2.2 13 46-58 179-191 (389)
377 1p3h_A 10 kDa chaperonin; beta 22.4 45 0.0015 17.2 1.5 12 45-56 61-72 (99)
378 2f82_A HMG-COA synthase; HMGS1 22.4 57 0.002 20.9 2.3 24 33-56 331-355 (450)
379 1ujv_A Membrane associated gua 22.4 57 0.0019 15.9 1.9 17 43-59 45-61 (96)
380 1gl5_A Tyrosine-protein kinase 22.4 57 0.002 14.7 1.8 13 46-58 21-33 (67)
381 1vb7_A PDZ and LIM domain 2; P 22.3 44 0.0015 16.1 1.5 18 42-60 45-62 (94)
382 2qt5_A Glutamate receptor-inte 22.3 47 0.0016 18.4 1.7 19 41-59 149-167 (200)
383 2k9g_A SH3 domain-containing k 22.3 57 0.0019 15.0 1.8 12 46-57 28-39 (73)
384 3kbq_A Protein TA0487; structu 22.3 97 0.0033 17.4 3.0 27 28-59 47-73 (172)
385 2o9s_A Ponsin; SH3 domain, sig 22.3 58 0.002 14.7 1.8 12 46-57 25-36 (67)
386 3uug_A Multiple sugar-binding 22.3 94 0.0032 18.1 3.1 29 29-57 212-240 (330)
387 2dl4_A Protein STAC; SH3 domai 22.3 59 0.002 14.7 1.9 12 46-57 26-37 (68)
388 2kxd_A 11-MER peptide, SH3 dom 22.3 57 0.0019 15.1 1.8 12 46-57 18-29 (73)
389 2g2c_A Putative molybdenum cof 22.2 1.1E+02 0.0037 16.8 3.7 28 28-59 53-80 (167)
390 1q02_A Sequestosome 1; helical 22.2 68 0.0023 14.7 1.9 23 28-50 5-27 (52)
391 2zpm_A Regulator of sigma E pr 22.2 45 0.0015 15.9 1.5 17 42-59 19-35 (91)
392 2ew3_A SH3-containing GRB2-lik 22.1 58 0.002 14.9 1.8 12 46-57 22-33 (68)
393 4glm_A Dynamin-binding protein 22.1 58 0.002 14.8 1.8 13 45-57 31-43 (72)
394 3ulr_B SRC substrate cortactin 22.1 59 0.002 14.4 1.8 14 45-58 27-40 (65)
395 2db2_A KIAA0890 protein; DSRM 22.0 51 0.0017 17.7 1.7 42 12-53 54-100 (119)
396 1mfg_A ERB-B2 interacting prot 22.0 45 0.0015 16.1 1.5 16 45-60 51-66 (95)
397 4esr_A Jouberin; AHI-1, AHI1, 21.9 59 0.002 14.7 1.8 14 45-58 24-37 (69)
398 1gvn_B Zeta; postsegregational 21.8 1.4E+02 0.0046 17.8 4.5 35 30-65 13-47 (287)
399 2pqh_A Spectrin alpha chain, b 21.8 58 0.002 15.4 1.8 12 46-57 21-32 (80)
400 2d8j_A FYN-related kinase; SH3 21.8 53 0.0018 15.2 1.7 12 46-57 26-37 (77)
401 1w70_A Neutrophil cytosol fact 21.8 61 0.0021 14.2 1.8 12 46-57 23-34 (60)
402 3mhx_A Putative ferrous iron t 21.8 81 0.0028 15.2 3.9 24 36-60 27-50 (85)
403 2p8t_A Hypothetical protein PH 21.8 1.1E+02 0.0036 17.9 3.1 15 44-58 156-170 (200)
404 1pqw_A Polyketide synthase; ro 21.8 72 0.0025 17.4 2.4 23 35-57 25-47 (198)
405 4anr_A Soluble lytic transglyc 21.7 1.3E+02 0.0046 18.9 3.8 27 27-54 204-230 (323)
406 2x3w_D Syndapin I, protein kin 21.7 46 0.0016 14.6 1.3 12 46-57 22-33 (60)
407 3b3d_A YTBE protein, putative 21.6 1.4E+02 0.0049 18.0 4.5 38 9-47 135-174 (314)
408 1ue9_A Intersectin 2; beta bar 21.6 60 0.0021 15.2 1.9 12 46-57 26-37 (80)
409 4eye_A Probable oxidoreductase 21.6 78 0.0027 19.2 2.7 24 34-57 145-168 (342)
410 1x2k_A OSTF1, osteoclast stimu 21.6 60 0.0021 14.7 1.8 12 46-57 26-37 (68)
411 3oxp_A Phosphotransferase enzy 21.6 1E+02 0.0034 16.3 2.9 23 26-48 20-42 (150)
412 2ak5_A RHO guanine nucleotide 21.6 61 0.0021 14.4 1.8 12 46-57 25-36 (64)
413 3erp_A Putative oxidoreductase 21.5 1.4E+02 0.0046 18.4 3.8 37 10-47 145-184 (353)
414 3l23_A Sugar phosphate isomera 21.5 97 0.0033 18.4 3.1 21 27-47 283-303 (303)
415 2fpf_A C-JUN-amino-terminal ki 21.5 55 0.0019 15.0 1.7 12 46-57 25-36 (71)
416 1r6j_A Syntenin 1; PDZ, membra 21.4 39 0.0013 16.5 1.1 18 41-59 37-54 (82)
417 3v0s_A Perakine reductase; AKR 21.4 1.4E+02 0.0047 18.2 3.8 38 9-47 111-151 (337)
418 3n6q_A YGHZ aldo-keto reductas 21.3 1.4E+02 0.0047 18.2 3.8 18 29-47 146-163 (346)
419 4dbf_A 2-hydroxyhepta-2,4-dien 21.3 1.4E+02 0.0049 18.3 3.8 25 35-61 237-261 (288)
420 3kxw_A Saframycin MX1 syntheta 21.2 1.6E+02 0.0055 18.9 4.3 29 29-58 46-74 (590)
421 2gso_A Phosphodiesterase-nucle 21.2 1.1E+02 0.0037 18.8 3.3 30 28-59 190-219 (393)
422 1tyg_B YJBS; alpha beta barrel 21.2 58 0.002 16.2 1.8 13 45-57 71-83 (87)
423 1vae_A Rhophilin 2, rhophilin, 21.2 47 0.0016 16.9 1.5 15 44-59 53-67 (111)
424 3lf6_A Putative phosphotransfe 21.2 1.1E+02 0.0038 16.5 3.6 23 26-48 25-47 (161)
425 2cc6_A VNG1446H, dodecin; flav 21.1 84 0.0029 15.1 2.4 25 18-42 5-29 (68)
426 2hd3_A Ethanolamine utilizatio 21.1 58 0.002 17.0 1.8 14 46-59 49-62 (103)
427 3led_A 3-oxoacyl-acyl carrier 21.1 84 0.0029 19.8 2.8 21 34-56 357-377 (392)
428 1i16_A Interleukin 16, LCF; cy 21.0 54 0.0018 17.1 1.7 17 43-59 73-89 (130)
429 2dl7_A KIAA0769 protein; SH3 d 21.0 63 0.0021 14.9 1.8 12 46-57 27-38 (73)
430 2h2b_A Tight junction protein 21.0 47 0.0016 16.4 1.4 16 44-59 54-69 (107)
431 1wxb_A Epidermal growth factor 20.9 64 0.0022 14.6 1.8 12 46-57 26-37 (68)
432 2ydl_A SH3 domain-containing k 20.9 64 0.0022 14.9 1.8 12 46-57 21-32 (69)
433 2cuc_A SH3 domain containing r 20.9 64 0.0022 14.6 1.8 12 46-57 26-37 (70)
434 1n7t_A 99-MER peptide of densi 20.9 49 0.0017 16.2 1.5 16 45-60 59-74 (103)
435 1g2b_A Spectrin alpha chain; c 20.9 65 0.0022 14.3 1.8 12 46-57 40-51 (62)
436 1gve_A Aflatoxin B1 aldehyde r 20.9 1.5E+02 0.005 17.9 3.8 18 29-47 117-134 (327)
437 2hc8_A PACS, cation-transporti 20.9 45 0.0015 17.3 1.3 16 44-59 28-43 (113)
438 1vim_A Hypothetical protein AF 20.8 77 0.0026 17.6 2.4 15 44-58 85-99 (200)
439 2k2m_A EPS8-like protein 1; al 20.8 65 0.0022 14.6 1.8 12 46-57 27-38 (68)
440 2lcs_A NAP1-binding protein 2; 20.7 64 0.0022 15.0 1.8 12 46-57 24-35 (73)
441 3kiz_A Phosphoribosylformylgly 20.7 62 0.0021 20.9 2.2 13 46-58 180-192 (394)
442 3c0c_A Endophilin-A2; endocyto 20.7 64 0.0022 14.9 1.8 12 46-57 32-43 (73)
443 4aec_A Cysteine synthase, mito 20.7 1.8E+02 0.0062 18.8 4.4 26 33-58 158-183 (430)
444 3lut_A Voltage-gated potassium 20.7 1.4E+02 0.0049 18.4 3.8 38 9-47 143-183 (367)
445 3utk_A Lipoprotein OUTS; neste 20.7 1.2E+02 0.004 16.6 3.4 22 26-47 66-87 (133)
446 1amu_A GRSA, gramicidin synthe 20.7 1.7E+02 0.0057 19.0 4.3 28 30-58 71-98 (563)
447 1vct_A Hypothetical protein PH 20.7 57 0.0019 18.6 1.9 13 45-57 170-182 (205)
448 2dl8_A SLIT-ROBO RHO GTPase-ac 20.7 64 0.0022 14.8 1.8 12 46-57 28-39 (72)
449 3a2k_A TRNA(Ile)-lysidine synt 20.6 42 0.0014 21.7 1.4 23 35-57 4-27 (464)
450 1tk9_A Phosphoheptose isomeras 20.6 68 0.0023 17.3 2.2 13 46-58 108-120 (188)
451 2ct4_A CDC42-interacting prote 20.5 65 0.0022 14.6 1.8 12 46-57 26-37 (70)
452 1s99_A YKOF; thiamin-binding p 20.5 1.2E+02 0.0041 17.7 3.2 20 28-47 128-147 (200)
453 7mdh_A Protein (malate dehydro 20.5 72 0.0025 20.3 2.4 19 47-65 107-125 (375)
454 2yva_A DNAA initiator-associat 20.4 69 0.0023 17.5 2.2 14 45-58 106-119 (196)
455 3nkq_A Ectonucleotide pyrophos 20.4 1.6E+02 0.0053 20.8 4.2 30 28-59 295-324 (831)
456 3qwb_A Probable quinone oxidor 20.4 86 0.0029 18.8 2.7 22 36-57 136-157 (334)
457 1csk_A C-SRC SH3 domain; phosp 20.4 66 0.0023 14.6 1.8 11 46-56 30-40 (71)
458 2eyx_A V-CRK sarcoma virus CT1 20.4 47 0.0016 15.1 1.2 12 46-57 27-38 (67)
459 1x6g_A Megakaryocyte-associate 20.3 65 0.0022 15.3 1.8 12 46-57 36-47 (81)
460 1x92_A APC5045, phosphoheptose 20.3 69 0.0024 17.6 2.2 14 45-58 110-123 (199)
461 2jw4_A Cytoplasmic protein NCK 20.3 68 0.0023 14.7 1.9 12 46-57 26-37 (72)
462 3up8_A Putative 2,5-diketo-D-g 20.2 1.5E+02 0.0052 17.9 3.8 15 33-47 139-153 (298)
463 3h0h_A Proto-oncogene tyrosine 20.2 67 0.0023 14.7 1.8 14 45-58 33-46 (73)
464 3gx1_A LIN1832 protein; APC633 20.1 1.1E+02 0.0038 16.2 4.8 38 18-58 33-70 (130)
465 3l8c_A D-alanine--poly(phospho 20.1 1.8E+02 0.006 18.5 4.3 28 30-58 36-63 (521)
466 3goh_A Alcohol dehydrogenase, 20.0 1E+02 0.0034 18.3 2.9 23 34-57 129-151 (315)
467 2csj_A TJP2 protein; PDZ domai 20.0 63 0.0022 16.3 1.8 15 46-60 63-77 (117)
468 2p8u_A Hydroxymethylglutaryl-C 20.0 66 0.0023 21.0 2.2 24 33-56 357-382 (478)
469 2b86_A Cytoplasmic protein NCK 20.0 69 0.0024 14.7 1.8 12 46-57 23-34 (67)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=99.84 E-value=4.1e-21 Score=125.88 Aligned_cols=70 Identities=16% Similarity=0.367 Sum_probs=59.0
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.++..+.|++++.|+++++++|++++||.||+++|.|.+ +|.||+|||
T Consensus 451 ~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv 522 (526)
T 4drs_A 451 IACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKI 522 (526)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC----------CCEEE
T ss_pred EEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEE
Confidence 58999999999999999 99999988899999999999999999999999999999999988 899999986
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=99.82 E-value=3.9e-20 Score=121.03 Aligned_cols=70 Identities=21% Similarity=0.332 Sum_probs=65.6
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+...+.|+++..+++.+++.|++++||.||+++|.+.+ +|.||+|||
T Consensus 445 ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv 516 (520)
T 3khd_A 445 LALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKV 516 (520)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTTCEEEEEE
T ss_pred EEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEE
Confidence 58999999999999999 99998887789999999999999999999999999999999987 899999986
No 3
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=99.81 E-value=8e-20 Score=118.67 Aligned_cols=69 Identities=25% Similarity=0.333 Sum_probs=65.6
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.++..+.|+++..+++++++.|++++||.||+++|.+ + +|.||+|||
T Consensus 397 ~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~-~~~g~tn~~~v 467 (470)
T 1e0t_A 397 LALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGAL-VPSGTTNTASV 467 (470)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSS-SCTTCCCEEEE
T ss_pred EEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCCC-CCCCccceEEE
Confidence 58999999999999999 999988888899999999999999999999999999999999 6 899999986
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=99.81 E-value=5.6e-20 Score=120.18 Aligned_cols=70 Identities=21% Similarity=0.392 Sum_probs=60.5
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+...+.|+++..|++++++.|++++||.||+++|.+.+ +|.||+|||
T Consensus 436 ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~G~TN~lrv 507 (511)
T 3gg8_A 436 LALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKV 507 (511)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC------CCEEEEE
T ss_pred EEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEE
Confidence 58999999999999999 99998877788999999999999999999999999999999987 899999986
No 5
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=99.80 E-value=1.1e-19 Score=120.74 Aligned_cols=70 Identities=23% Similarity=0.343 Sum_probs=66.5
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+...+.|+++..++++++++|++++||.||+++|.+.+ +|.||+|||
T Consensus 419 ia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~g~tN~~~v 490 (606)
T 3t05_A 419 IAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKI 490 (606)
T ss_dssp EEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCEEEEEECSSTTTCSSCCEEEE
T ss_pred EEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCccCCCCCCccceEE
Confidence 58999999999999999 99998887788999999999999999999999999999999987 899999986
No 6
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=99.79 E-value=1.1e-19 Score=119.53 Aligned_cols=70 Identities=40% Similarity=0.677 Sum_probs=64.2
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCC------CCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCCCCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWL------RDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~------~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+.. .+.|+++..|++.+++.|++++||.||+++|.+.++|.||+|||
T Consensus 470 ia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv 546 (550)
T 3gr4_A 470 IAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRV 546 (550)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEE
T ss_pred EEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEE
Confidence 58999999999999999 999977543 46789999999999999999999999999999888999999986
No 7
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=99.79 E-value=2.8e-19 Score=116.86 Aligned_cols=70 Identities=29% Similarity=0.463 Sum_probs=64.5
Q ss_pred CeecCChhHHhhhcccc-eeeecCCC------CCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCCCCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADW------LRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~------~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+. ..+.|+++..+++++++.|++++||.||+++|.+.++|.||+|||
T Consensus 421 ~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~tn~~~v 497 (500)
T 1a3w_A 421 ILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQGFKAGAGHSNTLQV 497 (500)
T ss_dssp EEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEEEEECCCTTTCCCCEEEE
T ss_pred EEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEEEEEecccCCCCCCceEEE
Confidence 58999999999999999 99997754 567899999999999999999999999999999877899999986
No 8
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=99.78 E-value=1.2e-19 Score=118.33 Aligned_cols=70 Identities=21% Similarity=0.344 Sum_probs=59.8
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCC-----CCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCCCCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWL-----RDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~-----~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+.. .+.|+++..+++.+++.|++++||.||+++|.+.++|.||+|||
T Consensus 420 ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~~~G~TN~~rv 495 (499)
T 3hqn_D 420 VCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHADHKVKGYANQTRI 495 (499)
T ss_dssp EEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEECC-----CEEEEE
T ss_pred EEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEE
Confidence 58999999999999999 999987643 36789999999999999999999999999999877899999986
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=99.73 E-value=9.5e-18 Score=111.31 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=65.7
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC-CCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~-~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.++..+.++++..+.+++++.|++++||.|++++|.+.+ .|.||.+|+
T Consensus 400 ~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~P~g~~G~TN~LkI 471 (587)
T 2e28_A 400 IAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKV 471 (587)
T ss_dssp EEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCCCCCEEEE
T ss_pred EEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccccceEEEecCcccCcCCCCceEEE
Confidence 58999999999999999 99998887788999999999999999999999999999999876 799999874
No 10
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=99.47 E-value=6.2e-14 Score=90.94 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=54.6
Q ss_pred CeecCChhHHhhhcccc-eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCCCCCCceEeC
Q psy255 1 MSSTRSEEIPKQVLIGK-IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTLIV 70 (70)
Q Consensus 1 ~a~t~~~~~~r~l~l~~-v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~~g~tn~l~v 70 (70)
||+|++++++|||+|+| |+|++.+ ..+.|++++.+++.+++.| ||+++|.| |.||+|||
T Consensus 400 ia~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g-------vvit~g~p---~~TN~~~v 459 (461)
T 3qtg_A 400 YVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP-------FVATYGIR---GGVHSVKV 459 (461)
T ss_dssp EEEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS-------EEEEECCT---TSCCEEEE
T ss_pred EEeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC-------EEEEeccC---CCCeEEEE
Confidence 58999999999999999 9999887 6789999999999999999 89999987 79999986
No 11
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=87.94 E-value=1.2 Score=27.83 Aligned_cols=26 Identities=12% Similarity=0.216 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
..+-.+++.+.+.|.+++||+|++++
T Consensus 326 Asipl~L~~~~~~g~~~~Gd~vll~~ 351 (365)
T 3gwa_A 326 STLPLALETMRANGTLARGMRLMLLG 351 (365)
T ss_dssp GHHHHHHHHHHHTTCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 44556788889999999999998875
No 12
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=82.63 E-value=2.6 Score=25.76 Aligned_cols=27 Identities=11% Similarity=0.115 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCCCCC--CeEEEee
Q psy255 30 DTRVAHGIKYGRDRKFLNQG--DPVIVVT 56 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~G--D~vv~~~ 56 (70)
-..+-.+++.+.+.|.+++| |+|++++
T Consensus 279 sasi~~~L~~~~~~g~~~~G~~d~vll~~ 307 (321)
T 3il6_A 279 AASIPILLDEAVENGTLILGSQQRVVLTG 307 (321)
T ss_dssp GGHHHHHHHHHHHTTSSCTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEEEE
Confidence 34466678888999999999 9998775
No 13
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=82.42 E-value=1.2 Score=27.48 Aligned_cols=26 Identities=8% Similarity=0.152 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
..+-.++..+.+.|.+++||+|++++
T Consensus 284 asi~~~L~~~~~~g~~~~Gd~vll~~ 309 (323)
T 3il3_A 284 ATVPVALDEAIRDGRIQRGQLLLLEA 309 (323)
T ss_dssp GHHHHHHHHHHHTTSSCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 33566788888999999999998875
No 14
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=81.96 E-value=1.2 Score=27.33 Aligned_cols=25 Identities=8% Similarity=0.210 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
.+-.+++.+.+.|.+++||+|++++
T Consensus 295 si~~~L~~~~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 295 SIPLALDVAVRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHHHHHHHHHHTTCSCTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 3566788888999999999998875
No 15
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=80.37 E-value=1.1 Score=23.41 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.9
Q ss_pred CCCCCCCCeEEEeec
Q psy255 43 RKFLNQGDPVIVVTG 57 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g 57 (70)
.-++++||+||+.+=
T Consensus 52 Arl~~~GD~vII~aY 66 (96)
T 1vc3_B 52 AHLVKPGDLVILVAY 66 (96)
T ss_dssp GGTCCTTCEEEEEEE
T ss_pred HccCCCCCEEEEEEC
Confidence 346899999998873
No 16
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=79.71 E-value=1.1 Score=23.50 Aligned_cols=14 Identities=29% Similarity=0.496 Sum_probs=11.5
Q ss_pred CCCCCCCCeEEEee
Q psy255 43 RKFLNQGDPVIVVT 56 (70)
Q Consensus 43 ~g~~~~GD~vv~~~ 56 (70)
.-++++||+||+.+
T Consensus 50 Arl~~~GD~vII~a 63 (97)
T 1uhe_A 50 ARKVAIGDVVIILA 63 (97)
T ss_dssp GGGCCTTCEEEEEE
T ss_pred HccCCCCCEEEEEE
Confidence 34689999999887
No 17
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=78.92 E-value=1.2 Score=23.57 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=11.5
Q ss_pred CCCCCCCCeEEEee
Q psy255 43 RKFLNQGDPVIVVT 56 (70)
Q Consensus 43 ~g~~~~GD~vv~~~ 56 (70)
.-++++||+||+.+
T Consensus 51 Arl~~~GD~vII~a 64 (102)
T 3plx_B 51 ARLAEVGDKVIIMS 64 (102)
T ss_dssp GGGCCTTCEEEEEE
T ss_pred HhccCCCCEEEEEE
Confidence 34689999999986
No 18
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=77.57 E-value=1.1 Score=21.98 Aligned_cols=19 Identities=42% Similarity=0.753 Sum_probs=15.5
Q ss_pred CCCCCCCCeEEEeecccCC
Q psy255 43 RKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~~ 61 (70)
+..++.||.|-+++|...+
T Consensus 15 rK~F~~GDHVkVi~G~~~g 33 (69)
T 2do3_A 15 RKYFKMGDHVKVIAGRFEG 33 (69)
T ss_dssp CSSCCTTCEEEESSSTTTT
T ss_pred eeeccCCCeEEEeccEEcC
Confidence 3678999999999997544
No 19
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=74.88 E-value=4 Score=25.45 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=19.8
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEee
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
+-.++..+.+.|.+++||+|++++
T Consensus 301 ipl~L~~~~~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 301 QYAGLAHLVENALVQPGDRVLLFG 324 (357)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEE
Confidence 445778888899999999998775
No 20
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=74.37 E-value=1.8 Score=23.24 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=11.5
Q ss_pred CCCCCCCeEEEeec
Q psy255 44 KFLNQGDPVIVVTG 57 (70)
Q Consensus 44 g~~~~GD~vv~~~g 57 (70)
-++++||+||+.+=
T Consensus 80 r~~~~GD~vII~ay 93 (114)
T 3oug_A 80 RRCEIGDQLFIISY 93 (114)
T ss_dssp GGCCTTCEEEEEEE
T ss_pred hccCCCCEEEEEEC
Confidence 46799999999863
No 21
>3r8s_U 50S ribosomal protein L24; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 2j28_U* 3fik_U 3j19_U 2wwq_U 3oat_U* 3oas_U* 3ofd_U 3ofc_U 3ofr_U* 3ofz_U* 3og0_U 3ofq_U 3r8t_U 3i1n_U 1vs8_U 1vs6_U 1vt2_U 3i1p_U 3i1r_U 3i1t_U ...
Probab=73.78 E-value=1.6 Score=23.02 Aligned_cols=15 Identities=40% Similarity=0.541 Sum_probs=12.8
Q ss_pred CCCCCCeEEEeeccc
Q psy255 45 FLNQGDPVIVVTGWK 59 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~ 59 (70)
-++.||.|++++|.-
T Consensus 3 ~IkkGD~V~Vi~Gkd 17 (102)
T 3r8s_U 3 KIRRDDEVIVLTGKD 17 (102)
T ss_dssp SSCSSCEEEECSSSS
T ss_pred CccCCCEEEEeEcCC
Confidence 478999999999964
No 22
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=73.63 E-value=2.8 Score=25.76 Aligned_cols=26 Identities=4% Similarity=-0.005 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
..+-.+++.+.+.|.+++||+|++++
T Consensus 310 asi~~~L~~~~~~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 310 ASIPLAMHRLLEENPELSGGLALQIG 335 (350)
T ss_dssp GHHHHHHHHHHHHCGGGTTSEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcCEEEEEE
Confidence 34566788888999999999999874
No 23
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=73.52 E-value=1.5 Score=23.81 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=13.6
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
=-++.||.|++++|.-
T Consensus 44 ~~IkkGD~V~Vi~Gkd 59 (121)
T 3j21_U 44 LPVRVGDKVRIMRGDY 59 (121)
T ss_dssp EECCSSSEEEECSSSC
T ss_pred cccccCCEEEEeecCC
Confidence 3688999999999964
No 24
>3v2d_Y 50S ribosomal protein L24; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ...
Probab=73.03 E-value=1.6 Score=23.26 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=12.8
Q ss_pred CCCCCCeEEEeeccc
Q psy255 45 FLNQGDPVIVVTGWK 59 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~ 59 (70)
-++.||.|++++|.-
T Consensus 6 ~IkkGD~V~Vi~Gkd 20 (110)
T 3v2d_Y 6 HVKKGDTVLVASGKY 20 (110)
T ss_dssp SCCTTSEEEECSSTT
T ss_pred ccCCCCEEEEeEcCC
Confidence 478999999999964
No 25
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=72.68 E-value=1.7 Score=23.55 Aligned_cols=22 Identities=36% Similarity=0.474 Sum_probs=16.2
Q ss_pred HHHhCCCCCCCCeEEEeecccC
Q psy255 39 YGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 39 ~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+....=-++.||.|.+++|.--
T Consensus 36 y~vr~~~IkkGD~V~Vi~G~dK 57 (120)
T 1vq8_T 36 YGQRNVRVNAGDTVEVLRGDFA 57 (120)
T ss_dssp HTCSEEECCTTCEEEECSSTTT
T ss_pred hccccccccCCCEEEEEecCCC
Confidence 3344446899999999999643
No 26
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=72.01 E-value=2.4 Score=23.64 Aligned_cols=14 Identities=29% Similarity=0.434 Sum_probs=11.4
Q ss_pred CCCCCCCCeEEEee
Q psy255 43 RKFLNQGDPVIVVT 56 (70)
Q Consensus 43 ~g~~~~GD~vv~~~ 56 (70)
.-++++||+||+.+
T Consensus 93 Arl~~~GD~VII~s 106 (143)
T 1pqh_A 93 AHCASVGDIVIIAS 106 (143)
T ss_dssp GGTCCTTCEEEEEE
T ss_pred HccCCCCCEEEEEE
Confidence 34689999999887
No 27
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=70.80 E-value=2.7 Score=23.33 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=11.7
Q ss_pred CCCCCCCCeEEEee
Q psy255 43 RKFLNQGDPVIVVT 56 (70)
Q Consensus 43 ~g~~~~GD~vv~~~ 56 (70)
.-++++||+||+.+
T Consensus 76 Arl~~~GD~vII~a 89 (139)
T 2c45_A 76 AHLVHPGDLVILIA 89 (139)
T ss_dssp TTTSCTTCEEEEEE
T ss_pred HccCCCCCEEEEEE
Confidence 34689999999987
No 28
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=69.33 E-value=5.2 Score=24.64 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
..+-.++..+.+.|.+++||+|++++
T Consensus 306 asi~~~L~~~~~~g~~~~Gd~vll~~ 331 (345)
T 3s21_A 306 ASVPIVLSKLKELGRLKKGDRIALLG 331 (345)
T ss_dssp GHHHHHHHHHHHHTCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 33556778888899999999988765
No 29
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=69.21 E-value=2.5 Score=23.67 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=14.0
Q ss_pred CCCCCCeEEEeecccCC
Q psy255 45 FLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~~ 61 (70)
-++.||.|.+++|.--|
T Consensus 48 ~IkkGD~V~Vi~GkdKG 64 (145)
T 2zkr_t 48 PIRKDDEVQVVRGHYKG 64 (145)
T ss_dssp BCCTTCEEEECSSTTTT
T ss_pred ccCCCCEEEEeecCCCC
Confidence 48999999999997433
No 30
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U
Probab=69.00 E-value=2.3 Score=23.28 Aligned_cols=20 Identities=35% Similarity=0.384 Sum_probs=15.4
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
...=-++.||.|++++|.--
T Consensus 45 vrs~~IkkgD~V~Vi~GkdK 64 (127)
T 3u5e_Y 45 IKALPIRRDDEVLVVRGSKK 64 (127)
T ss_dssp CCEEECCTTCEEEECSSTTT
T ss_pred cCcccccCCCEEEEeecCCC
Confidence 33446899999999999743
No 31
>3bbo_W Ribosomal protein L24; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=68.70 E-value=3 Score=24.38 Aligned_cols=18 Identities=44% Similarity=0.763 Sum_probs=14.3
Q ss_pred CCCCCeEEEeecccCC-CC
Q psy255 46 LNQGDPVIVVTGWKKG-AG 63 (70)
Q Consensus 46 ~~~GD~vv~~~g~~~~-~g 63 (70)
+++||.|++++|---| .|
T Consensus 69 IkKGD~V~VIaGkDKGK~G 87 (191)
T 3bbo_W 69 VKVGDTVKVISGGEKGKIG 87 (191)
T ss_dssp SCCSSCEEECSSSSTTCCC
T ss_pred eecCCEEEEeecCCCCceE
Confidence 7899999999997433 44
No 32
>2zjr_R 50S ribosomal protein L24; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.1 PDB: 1nwx_S* 1nwy_S* 1sm1_S* 1xbp_S* 2d3o_S 2zjp_R* 2zjq_R 1nkw_S 3cf5_R* 3dll_R* 3pio_R* 3pip_R* 1pnu_S 1pny_S 1vor_V 1vou_V 1vow_V 1voy_V 1vp0_V
Probab=68.34 E-value=1.7 Score=23.32 Aligned_cols=15 Identities=40% Similarity=0.742 Sum_probs=13.1
Q ss_pred CCCCCCeEEEeeccc
Q psy255 45 FLNQGDPVIVVTGWK 59 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~ 59 (70)
-++.||.|.+++|.-
T Consensus 15 ~IkkGD~V~Vi~Gkd 29 (115)
T 2zjr_R 15 HFKKGDTVIVLSGKH 29 (115)
T ss_dssp SSCTTSEEECCSSSS
T ss_pred cccCCCEEEEeEcCC
Confidence 578999999999964
No 33
>3iz5_Y 60S ribosomal protein L26 (L24P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Y
Probab=65.84 E-value=2.7 Score=23.66 Aligned_cols=16 Identities=38% Similarity=0.368 Sum_probs=13.8
Q ss_pred CCCCCCeEEEeecccC
Q psy255 45 FLNQGDPVIVVTGWKK 60 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~ 60 (70)
-++.||.|++++|.--
T Consensus 48 ~IkKGD~V~Vi~GkdK 63 (150)
T 3iz5_Y 48 PIRKDDEVQVVRGSYK 63 (150)
T ss_dssp ECCSSSEEEECSSTTT
T ss_pred ccCCCCEEEEeecCCC
Confidence 6899999999999743
No 34
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=65.45 E-value=9.1 Score=24.75 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
...+..+.+-+++.+++|-++.|.++++++|..
T Consensus 24 ~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas 56 (405)
T 3zu3_A 24 TGCEANVKKQIDYVTTEGPIANGPKRVLVIGAS 56 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCS
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcc
Confidence 345677888889999999999999999988864
No 35
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S
Probab=65.44 E-value=3 Score=23.08 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=14.4
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.=-++.||.|++++|.--
T Consensus 46 s~~IkkgD~V~Vi~GkdK 63 (135)
T 4a17_S 46 SMPVRKDDEVLIVRGKFK 63 (135)
T ss_dssp EEECCTTCEEEECSSTTT
T ss_pred cccccCCCEEEEeecCCC
Confidence 335899999999999643
No 36
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=65.02 E-value=3.6 Score=21.00 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=15.6
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|++++||.++-+-|.+
T Consensus 40 ~~aGll~~GD~I~~ing~~ 58 (112)
T 1qau_A 40 EQSGLIQAGDIILAVNDRP 58 (112)
T ss_dssp HHHTCCCTTCEEEEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 4568889999999988864
No 37
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=64.76 E-value=3.6 Score=21.19 Aligned_cols=21 Identities=24% Similarity=0.502 Sum_probs=16.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|++++||.|+-+-|.+.
T Consensus 61 A~~aGll~~GD~I~~vng~~v 81 (113)
T 1va8_A 61 AEKSGLLHEGDEVLEINGIEI 81 (113)
T ss_dssp HHHHTCCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 345788899999999888753
No 38
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=64.68 E-value=10 Score=22.77 Aligned_cols=25 Identities=12% Similarity=0.098 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
+-.++..+.+.|.+++||++++++-
T Consensus 280 ~~~~L~~~~~~~~~~~G~~vll~~~ 304 (317)
T 1hnj_A 280 VPCALDEAVRDGRIKPGQLVLLEAF 304 (317)
T ss_dssp HHHHHHHHHHTTCSCTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEEE
Confidence 4456777888899999999998753
No 39
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=63.89 E-value=4.8 Score=20.46 Aligned_cols=21 Identities=19% Similarity=0.283 Sum_probs=16.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 49 A~~aG~L~~GD~Il~ING~~v 69 (97)
T 2ejy_A 49 IHRQGSLHVGDEILEINGTNV 69 (97)
T ss_dssp HHHHTCCCTTCEEEEETTBCC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 345787899999999988753
No 40
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=63.11 E-value=15 Score=21.70 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=20.2
Q ss_pred HHHHhCCCCCCCCeEEEeecccCC
Q psy255 38 KYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 38 ~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
-.+.+.|++..|+.||.+.|...+
T Consensus 154 lMAaDAGlIp~geeVIAiGGT~~G 177 (206)
T 1t57_A 154 IMAADAGLIPVDEEVIAIGGTAWG 177 (206)
T ss_dssp HHHHHTTSSCSSSCEEEEECSSSS
T ss_pred eeeecCCCCCCCCeEEEEccccCC
Confidence 357799999999999999998543
No 41
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.12 E-value=3.2 Score=19.38 Aligned_cols=17 Identities=29% Similarity=0.202 Sum_probs=13.7
Q ss_pred CCCCCCeEEEeecccCC
Q psy255 45 FLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~~ 61 (70)
-+++||.|-++.|...+
T Consensus 7 ~f~~GD~V~V~~Gpf~g 23 (59)
T 2e6z_A 7 GFQPGDNVEVCEGELIN 23 (59)
T ss_dssp SCCTTSEEEECSSTTTT
T ss_pred cCCCCCEEEEeecCCCC
Confidence 36899999999997543
No 42
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=61.52 E-value=3.4 Score=18.98 Aligned_cols=17 Identities=35% Similarity=0.395 Sum_probs=13.6
Q ss_pred CCCCCCeEEEeecccCC
Q psy255 45 FLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~~ 61 (70)
.++.||.|-++.|...+
T Consensus 4 ~~~~Gd~V~V~~Gpf~g 20 (58)
T 1nz9_A 4 AFREGDQVRVVSGPFAD 20 (58)
T ss_dssp SCCTTCEEEECSGGGTT
T ss_pred ccCCCCEEEEeecCCCC
Confidence 35799999999997543
No 43
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=60.06 E-value=5.2 Score=19.71 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=16.1
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 43 ~~aG~L~~GD~I~~vng~~v 62 (95)
T 2vwr_A 43 AQDGRLSSNDRVLAINGHDL 62 (95)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHCCCCCCCCEEEEECCEEC
Confidence 45787899999999988753
No 44
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=59.92 E-value=5.2 Score=19.43 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=15.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 41 ~~aG~L~~GD~I~~ing~~v 60 (90)
T 2q9v_A 41 DTDGRLRSGDELISVDGTPV 60 (90)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHCCCCCCCCEEEEECCEEC
Confidence 34687899999999988753
No 45
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=58.70 E-value=6.9 Score=20.01 Aligned_cols=19 Identities=21% Similarity=0.141 Sum_probs=15.3
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 40 ~aG~L~~GD~Il~Ing~~v 58 (106)
T 2la8_A 40 IDSKLQRGDIITKFNGDAL 58 (106)
T ss_dssp HHTTCCTTCEEEEESSCBC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 3577899999999988753
No 46
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=57.99 E-value=7.7 Score=18.90 Aligned_cols=20 Identities=25% Similarity=0.245 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.|+-+-|.+.
T Consensus 40 A~~aG-l~~GD~I~~ing~~v 59 (91)
T 2vsp_A 40 ADLAG-LEDEDVIIEVNGVNV 59 (91)
T ss_dssp HHHTT-CCTTCEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 44577 799999999988753
No 47
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=57.83 E-value=5.9 Score=19.32 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=15.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.++-+-|.+.
T Consensus 43 ~~aG~L~~GD~I~~vng~~v 62 (92)
T 2qg1_A 43 DADGRLMQGDQILMVNGEDV 62 (92)
T ss_dssp HHHTCCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34687899999999888753
No 48
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=57.74 E-value=6.1 Score=18.96 Aligned_cols=19 Identities=16% Similarity=0.102 Sum_probs=15.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 40 ~aG~l~~GD~I~~vng~~v 58 (85)
T 2i04_A 40 LDGKMETGDVIVSVNDTCV 58 (85)
T ss_dssp HHCCCCTTCEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 3486899999999988653
No 49
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=57.53 E-value=16 Score=22.14 Aligned_cols=24 Identities=13% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEee
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
+-.++..+.+.|.+++||++++++
T Consensus 286 ~~~~L~~~~~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 286 IPLALAHGLRQGILRDGGNMVLTG 309 (331)
T ss_dssp HHHHHHHHHHTTCSCTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEE
Confidence 455677888899999999999875
No 50
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=57.45 E-value=11 Score=23.71 Aligned_cols=25 Identities=8% Similarity=0.098 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
.+-.++..+.+.|.+++||+|++.+
T Consensus 280 Si~l~L~~~l~~~~l~~Gd~ill~s 304 (396)
T 1xpm_A 280 SLYLSLISLLENRDLQAGETIGLFS 304 (396)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 3455666677779899999998775
No 51
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=57.35 E-value=8.1 Score=18.71 Aligned_cols=18 Identities=22% Similarity=0.304 Sum_probs=14.3
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 41 ~~aG-l~~GD~I~~ing~~ 58 (89)
T 2q3g_A 41 AQAG-VAVGDWVLSIDGEN 58 (89)
T ss_dssp HHTT-CCTTCEEEEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3457 79999999988864
No 52
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=56.70 E-value=8.9 Score=18.80 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=15.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 47 ~~aG~l~~GD~I~~vng~~v 66 (96)
T 1d5g_A 47 ESDGRIHKGDRVLAVNGVSL 66 (96)
T ss_dssp HHTTCCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34687899999999888753
No 53
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=56.15 E-value=8.7 Score=18.50 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=14.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 41 ~~aG-l~~GD~I~~ing~~v 59 (88)
T 2uzc_A 41 AQAN-VRIGDVVLSIDGINA 59 (88)
T ss_dssp HHTT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999988753
No 54
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=55.74 E-value=8.9 Score=18.59 Aligned_cols=20 Identities=25% Similarity=0.322 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.++-+-|.+.
T Consensus 40 A~~aG-L~~GD~I~~ing~~v 59 (91)
T 1g9o_A 40 AEKAG-LLAGDRLVEVNGENV 59 (91)
T ss_dssp HHHTT-CCTTCEEEEETTEEC
T ss_pred HHHCC-CCCCCEEEEECCEEC
Confidence 34567 799999999988753
No 55
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=55.29 E-value=6.8 Score=19.19 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=15.5
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.++.||.++-+-|.+.
T Consensus 43 ~aG~L~~GD~I~~ing~~v 61 (93)
T 3o46_A 43 RSGLIHVGDELREVNGIPV 61 (93)
T ss_dssp HHTCCCTTCEEEEETTEES
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 4687899999999988753
No 56
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=55.15 E-value=7.1 Score=19.10 Aligned_cols=20 Identities=20% Similarity=0.347 Sum_probs=15.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
-+.|.++.||.++-+-|.+.
T Consensus 35 ~~aG~L~~GD~Il~ing~~v 54 (88)
T 3e17_A 35 TKDGNLHEGDIILKINGTVT 54 (88)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34687899999999988753
No 57
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=54.67 E-value=8.8 Score=19.46 Aligned_cols=21 Identities=19% Similarity=0.184 Sum_probs=16.3
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|...
T Consensus 57 A~~aG~L~~GD~Il~Vng~~v 77 (108)
T 2d92_A 57 AERSGGLLPGDRLVSVNEYCL 77 (108)
T ss_dssp HHHHTCCCTTCEEEEESSCBC
T ss_pred HHHCCCCCCCCEEEEECCEEC
Confidence 344587899999999988753
No 58
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=54.63 E-value=14 Score=23.09 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.+-.++..+.+.|.+++||++++++-
T Consensus 316 si~~~L~~~~~~g~~~~Gd~vll~~~ 341 (382)
T 1u0m_A 316 VVLDALRRLFDEGGVEEGARGLLAGF 341 (382)
T ss_dssp HHHHHHHHHHHSCCCCSSCCCEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 35567788888999999999998653
No 59
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=54.38 E-value=11 Score=19.62 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=16.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 67 A~~aG~L~~GD~Il~ing~~v 87 (128)
T 2db5_A 67 ADRDQRLKENDQILAINHTPL 87 (128)
T ss_dssp HHHTCCCCSSCBEEEESSCBC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 345787899999999988753
No 60
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=54.03 E-value=11 Score=18.22 Aligned_cols=20 Identities=20% Similarity=0.317 Sum_probs=15.6
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 37 ~~aG~l~~GD~I~~ing~~v 56 (92)
T 3cyy_A 37 ARDGNIQEGDVVLKINGTVT 56 (92)
T ss_dssp HHSCCCCTTCEEEEETTEEC
T ss_pred HhcCCCCCCCEEEEECCEEC
Confidence 34676799999999988653
No 61
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=53.57 E-value=15 Score=22.33 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEee
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
+-.++..+.+.|.+++||++++++
T Consensus 294 ~~~~L~~~~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 294 VALALDRLVRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHHHHHHHHHTSSCTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEE
Confidence 444677778889999999999875
No 62
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=53.23 E-value=9.6 Score=19.13 Aligned_cols=20 Identities=25% Similarity=0.361 Sum_probs=15.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 52 ~~aG~L~~GD~I~~vng~~v 71 (105)
T 1wha_A 52 HRAGTLQVGDRVLSINGVDV 71 (105)
T ss_dssp HHHSSCCTTCEEEEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34677899999999988753
No 63
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=53.08 E-value=7.8 Score=19.28 Aligned_cols=20 Identities=20% Similarity=0.006 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 48 ~~aG~L~~GD~I~~vng~~v 67 (102)
T 2i1n_A 48 AMDGRLGVNDCVLRVNEVDV 67 (102)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHCCCCCCCCEEEEECCEEC
Confidence 34687899999999888653
No 64
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=53.04 E-value=7.3 Score=18.91 Aligned_cols=17 Identities=18% Similarity=0.161 Sum_probs=13.8
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.| +++||.|+-+-|.+.
T Consensus 48 aG-l~~GD~I~~vng~~v 64 (91)
T 1m5z_A 48 GG-LKPYDRLLQVNHVRT 64 (91)
T ss_dssp HT-CCTTCEEEEETTEEC
T ss_pred cC-CCCCCEEEEECCEEC
Confidence 47 799999999988653
No 65
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=52.97 E-value=10 Score=18.36 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=14.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 41 ~~aG-l~~GD~I~~ing~~v 59 (91)
T 2pkt_A 41 ALAN-LCIGDVITAIDGENT 59 (91)
T ss_dssp HHTT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3467 699999999988753
No 66
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=52.84 E-value=7.6 Score=20.42 Aligned_cols=21 Identities=24% Similarity=0.359 Sum_probs=16.6
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.++.||.|+-+-|.+.
T Consensus 78 A~~aG~L~~GD~Il~vng~~v 98 (128)
T 1nf3_C 78 AQSTGLLAVNDEVLEVNGIEV 98 (128)
T ss_dssp HHHHTCCCTTCEEEEETTEES
T ss_pred HHHCCCCCCCCEEEEECCEEC
Confidence 345788899999999988753
No 67
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=52.78 E-value=11 Score=19.54 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=16.1
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|..
T Consensus 57 A~~aG~L~~GD~Il~Vng~~ 76 (123)
T 1ueq_A 57 AAQDGKMETGDVIVYINEVC 76 (123)
T ss_dssp HHHTSCCCTTCEEEEETTEE
T ss_pred HHHCCCCCCCCEEEEECCEE
Confidence 34678789999999988864
No 68
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=52.63 E-value=11 Score=18.62 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=15.6
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.|+-+-|.+.
T Consensus 50 A~~aG-L~~GD~I~~ing~~v 69 (96)
T 2ego_A 50 AQLAG-LTPGDTIASVNGLNV 69 (96)
T ss_dssp HHHTT-CCTTCEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 44577 799999999988753
No 69
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=52.29 E-value=8.1 Score=19.06 Aligned_cols=19 Identities=11% Similarity=0.235 Sum_probs=15.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 45 ~aG~l~~GD~I~~vng~~v 63 (97)
T 1n7e_A 45 RTGAIHIGDRILAINSSSL 63 (97)
T ss_dssp HHTCCCTTCEEEEETTEEC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 3486799999999888753
No 70
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=52.23 E-value=23 Score=20.95 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+.+.++.+.--+++||. +.+|.+.+
T Consensus 193 ~~lia~ls~~~tL~pGDv--I~TGTp~g 218 (246)
T 1wzo_A 193 AELLEFISEFMTLEPYDV--LLTGTPKG 218 (246)
T ss_dssp HHHHHHHHTTSCBCTTCE--EECCCCCC
T ss_pred HHHHHHHhCCCCcCCCCE--EEeCCCCC
Confidence 334444555667899994 46677644
No 71
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=52.20 E-value=14 Score=18.58 Aligned_cols=20 Identities=25% Similarity=0.305 Sum_probs=15.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 53 ~~aG~L~~GD~Il~Vng~~v 72 (113)
T 1um7_A 53 DLSGELRRGDRILSVNGVNL 72 (113)
T ss_dssp HHTTCCCTTCEEEEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34576899999999988753
No 72
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=52.06 E-value=7.8 Score=18.93 Aligned_cols=18 Identities=22% Similarity=0.152 Sum_probs=14.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 39 ~aG-l~~GD~I~~vng~~v 56 (91)
T 2f5y_A 39 RAG-LQQLDTVLQLNERPV 56 (91)
T ss_dssp HHT-CCTTCEEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 347 799999999988753
No 73
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=51.97 E-value=8.4 Score=18.97 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=15.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 45 ~aG~l~~GD~I~~vng~~v 63 (98)
T 2opg_A 45 KDGRLWAGDQILEVNGIDL 63 (98)
T ss_dssp HHCCCCTTCEEEEETTEEC
T ss_pred hCCCCCCCCEEEEECCEEC
Confidence 3586899999999988753
No 74
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=51.91 E-value=8.5 Score=18.75 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=14.7
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|.+++||.|+-+-|.+.
T Consensus 49 aG~l~~GD~I~~vng~~v 66 (94)
T 2fe5_A 49 DGRLQIGDRLLAVNNTNL 66 (94)
T ss_dssp HCCCCTTCEEEEETTEEC
T ss_pred cCCCCCCCEEEEECCEEC
Confidence 487899999999888653
No 75
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=51.82 E-value=11 Score=19.16 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=16.2
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 62 A~~aG~L~~GD~Il~Vng~~v 82 (112)
T 2r4h_A 62 AERSGKMRIGDEILEINGETT 82 (112)
T ss_dssp HHHTTCCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 344686899999999888753
No 76
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=51.23 E-value=6 Score=19.38 Aligned_cols=19 Identities=26% Similarity=0.330 Sum_probs=15.0
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 43 ~~aG-l~~GD~I~~ing~~v 61 (95)
T 3r68_A 43 EAAG-LKNNDLVVAVNGKSV 61 (95)
T ss_dssp HHHT-CCTTEEEEEETTEEC
T ss_pred HHCC-CCCCCEEEEECCEEC
Confidence 4467 799999999988753
No 77
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=51.22 E-value=10 Score=20.27 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=16.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
|.+.|.+++||.|+-+-|.+.
T Consensus 62 A~~aG~L~~GD~Il~VnG~~v 82 (126)
T 1wif_A 62 AASDGILQPGDVLISVGHANV 82 (126)
T ss_dssp GGGCSSSCTTCBEEEESSSCC
T ss_pred HHHcCCCCCCCEEEEECCEEc
Confidence 345787899999999988753
No 78
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=51.14 E-value=8.7 Score=19.54 Aligned_cols=19 Identities=16% Similarity=0.244 Sum_probs=15.5
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|.+
T Consensus 47 ~~aG~L~~GD~Il~Vng~~ 65 (108)
T 3cbz_A 47 AADGRIEPGDMLLQVNDMN 65 (108)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HhcCCCCCCCEEEEECCEE
Confidence 3468789999999988865
No 79
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=51.10 E-value=8.9 Score=18.84 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=15.0
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|.+
T Consensus 46 ~~aG~l~~GD~I~~ing~~ 64 (97)
T 2jil_A 46 DREGTIKPGDRLLSVDGIR 64 (97)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHCCCCCCCCEEEEECCEE
Confidence 3457679999999988865
No 80
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=50.94 E-value=11 Score=18.78 Aligned_cols=20 Identities=25% Similarity=0.315 Sum_probs=15.6
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.|+-+-|.+.
T Consensus 39 A~~aG-l~~GD~I~~ing~~v 58 (106)
T 3ngh_A 39 AEKAG-LLDGDRVLRINGVFV 58 (106)
T ss_dssp HHHTT-CCTTCEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 34578 699999999988753
No 81
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=50.64 E-value=30 Score=22.46 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.....+.+-+++.++++-++.|.++++++|..
T Consensus 39 g~~~~v~~qi~y~~~~~~~~~~gKvaLVTGAS 70 (422)
T 3s8m_A 39 GCERNVLEQIAATRARGVRNDGPKKVLVIGAS 70 (422)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSSCSEEEEESCS
T ss_pred hHHHHHHHHHHHHhhccccccCCCEEEEECCC
Confidence 34556667788999999998889998888864
No 82
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=50.50 E-value=8.4 Score=19.21 Aligned_cols=20 Identities=30% Similarity=0.614 Sum_probs=15.3
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.++-+-|.+.
T Consensus 58 A~~aG-l~~GD~I~~ing~~v 77 (104)
T 3sfj_A 58 AEIAG-LQIGDKIMQVNGWDM 77 (104)
T ss_dssp HHHHT-CCTTCEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 34467 799999999888753
No 83
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=50.43 E-value=9.2 Score=18.61 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=14.6
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|.+++||.|+-+-|.+.
T Consensus 49 aG~l~~GD~I~~vng~~v 66 (97)
T 2iwn_A 49 DGRIQIGDQIIAVDGTNL 66 (97)
T ss_dssp HCCCCTTCEEEEETTEEC
T ss_pred CCCCCCCCEEEEECCEEC
Confidence 476899999999888653
No 84
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=50.39 E-value=9.9 Score=18.85 Aligned_cols=19 Identities=26% Similarity=0.345 Sum_probs=15.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 52 ~aG~L~~GD~I~~vng~~v 70 (101)
T 2jik_A 52 LDGRLQEGDKILSVNGQDL 70 (101)
T ss_dssp HHCCCCTTCEEEEETTEEC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 3487899999999988753
No 85
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=50.21 E-value=9.5 Score=17.83 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=14.1
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.|.+++||.++-+-|.+
T Consensus 37 aG~l~~GD~I~~ing~~ 53 (81)
T 2rcz_A 37 DGNIQEGDVVLKINGTV 53 (81)
T ss_dssp HSSCCTTCEEEEETTEE
T ss_pred CCCCCCCCEEEEECCEE
Confidence 47679999999988865
No 86
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=50.11 E-value=12 Score=17.99 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 42 ~~aG-l~~GD~I~~ing~~v 60 (90)
T 2eaq_A 42 EFSQ-LQVDDEIIAINNTKF 60 (90)
T ss_dssp HHTT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEc
Confidence 3457 699999999988754
No 87
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.09 E-value=9.5 Score=18.74 Aligned_cols=19 Identities=26% Similarity=0.358 Sum_probs=15.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 44 ~ag~L~~GD~I~~ing~~v 62 (91)
T 2e7k_A 44 QQGLLHVGDIIKEVNGQPV 62 (91)
T ss_dssp HHCCCCTTCEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 4577799999999888754
No 88
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=50.09 E-value=9 Score=18.81 Aligned_cols=20 Identities=20% Similarity=0.425 Sum_probs=15.6
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.|+-+-|.+.
T Consensus 43 A~~aG-l~~GD~I~~ing~~v 62 (96)
T 2v90_A 43 AKKAG-MQAGDRLVAVAGESV 62 (96)
T ss_dssp HHHTT-CCTTEEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 34577 799999999988753
No 89
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=49.99 E-value=11 Score=18.98 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=15.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 50 ~~aG~L~~GD~I~~vng~~v 69 (110)
T 1um1_A 50 AADGRLSLGDRILEVNGSSL 69 (110)
T ss_dssp HHHSCCCTTCEEEEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34686899999999988753
No 90
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=49.96 E-value=9.6 Score=18.75 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 51 ~~aG~L~~GD~I~~ing~~v 70 (98)
T 1ihj_A 51 HLCGRLKVGDRILSLNGKDV 70 (98)
T ss_dssp HHHCSCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34586799999999888753
No 91
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=49.86 E-value=9.5 Score=20.28 Aligned_cols=19 Identities=32% Similarity=0.356 Sum_probs=15.3
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.| ++.||.|+-+-|.+
T Consensus 78 A~~aG-L~~GD~Il~Vng~~ 96 (132)
T 3l4f_D 78 AWRAG-LRMGDFLIEVNGQN 96 (132)
T ss_dssp GGGGT-CCTTCEEEEESSSB
T ss_pred HHHcC-CCCCCEEEEECCEE
Confidence 34568 89999999998875
No 92
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.81 E-value=12 Score=18.26 Aligned_cols=18 Identities=22% Similarity=0.250 Sum_probs=14.4
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 47 ~aG-l~~GD~I~~ing~~v 64 (94)
T 2eeg_A 47 LAA-LCPGDLIQAINGEST 64 (94)
T ss_dssp HTT-CCTTCEEEEETTEET
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 457 799999999988653
No 93
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=49.58 E-value=11 Score=23.44 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEee
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
+-.++..+.+. +++||+|++++
T Consensus 316 i~l~L~~~~~~--l~~Gd~vll~~ 337 (359)
T 3h78_A 316 TPVTLAMFWPD--IQPGQRVLVLT 337 (359)
T ss_dssp HHHHHHHHGGG--SCTTCEEEEEE
T ss_pred HHHHHHHHHHh--CCCCCEEEEEE
Confidence 44566666666 89999998775
No 94
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=49.54 E-value=12 Score=18.83 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=15.0
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 59 ~~aG-l~~GD~I~~vng~~v 77 (109)
T 1q3o_A 59 WRAG-LRMGDFLIEVNGQNV 77 (109)
T ss_dssp HHTT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3468 799999999988753
No 95
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=49.53 E-value=2 Score=26.73 Aligned_cols=25 Identities=4% Similarity=-0.076 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
.+-.++..+.+.|.+++||+|++++
T Consensus 305 si~~~L~~~~~~g~~~~Gd~vll~~ 329 (354)
T 4efi_A 305 SIPLLITTELKDRLKEETLQLGMFG 329 (354)
T ss_dssp HHHHHHHHHSHHHHHHSCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEEE
Confidence 3555677777788899999988765
No 96
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=49.50 E-value=9.5 Score=19.52 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=16.3
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 62 A~~aG~l~~GD~Il~ing~~v 82 (117)
T 2o2t_A 62 AHRDGRLKETDQILAINGQAL 82 (117)
T ss_dssp HHHHCCCCTTCEEEEETTEEC
T ss_pred HHHCCCCCCCCEEEEECCEEC
Confidence 345687899999999888653
No 97
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=49.39 E-value=9.6 Score=19.29 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=15.5
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.++-+-|.+
T Consensus 46 ~~aG~L~~GD~Il~Vng~~ 64 (106)
T 4amh_A 46 HKDGKLQIGDKLLAVNNVA 64 (106)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHCCCCCCCCEEEEECCEE
Confidence 3468789999999988864
No 98
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=49.37 E-value=9.7 Score=19.11 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 47 ~~aG~L~~GD~I~~vng~~v 66 (105)
T 2awx_A 47 HKDGKLQIGDKLLAVNSVSL 66 (105)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHCCCCCCCCEEEEECCEEC
Confidence 34687899999999888653
No 99
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=49.37 E-value=7.2 Score=18.63 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=14.3
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.++-+-|.+.
T Consensus 38 ~aG-l~~GD~I~~ing~~v 55 (83)
T 2kv8_A 38 FVG-LRAGDQILAVNEINV 55 (83)
T ss_dssp TTT-CCTTCEEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 357 799999999888753
No 100
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=49.31 E-value=12 Score=18.67 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=14.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 43 ~~aG-L~~GD~I~~ing~~v 61 (103)
T 1wf7_A 43 SQAH-VRIGDVVLSIDGISA 61 (103)
T ss_dssp HHTT-CCTTCBEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999888753
No 101
>2l8k_A NSP7, non-structural protein 7; viral protein; NMR {Equine arteritis virus}
Probab=49.27 E-value=7.9 Score=20.97 Aligned_cols=16 Identities=31% Similarity=0.613 Sum_probs=12.4
Q ss_pred CCCCCCCCeEEEeecc
Q psy255 43 RKFLNQGDPVIVVTGW 58 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~ 58 (70)
.--+++||.||++.+.
T Consensus 74 ~~~~~~GD~VV~LG~~ 89 (123)
T 2l8k_A 74 EQEVTAGDRVVVIDGL 89 (123)
T ss_dssp CCCCCTTSEEEESSCC
T ss_pred ccCCCCCCEEEEecce
Confidence 3446899999998773
No 102
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=49.25 E-value=9.8 Score=18.90 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=15.6
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 53 ~~aG~l~~GD~I~~ing~~v 72 (103)
T 2fcf_A 53 GKNGTLKPGDRIVEVDGMDL 72 (103)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 45676799999999888753
No 103
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=49.12 E-value=9.5 Score=19.20 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=15.4
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|.+
T Consensus 54 ~~aG~L~~GD~I~~vng~~ 72 (107)
T 1wf8_A 54 QRDGRIQVNDQIVEVDGIS 72 (107)
T ss_dssp HHHCSSCTTCBEEEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 4468789999999988865
No 104
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=49.01 E-value=15 Score=22.01 Aligned_cols=29 Identities=3% Similarity=-0.135 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.+....+++.+.+...+++||.+|+=..+
T Consensus 44 ~~~~~~~l~Ell~~a~l~~G~ifVvGcST 72 (235)
T 1v8d_A 44 RRAAQRAAEEFLQAFPMAPGSLFVLGGST 72 (235)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCEEEEEECH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 34577788888888899999999985544
No 105
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=48.94 E-value=9.2 Score=18.85 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 47 ~~aG-l~~GD~I~~ing~~v 65 (98)
T 2jxo_A 47 EASG-LRAQDRIVEVNGVCM 65 (98)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999888753
No 106
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=48.91 E-value=10 Score=18.78 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=15.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 51 ~aG~l~~GD~I~~vng~~v 69 (103)
T 1wfv_A 51 RNGRMRVGDQIIEINGEST 69 (103)
T ss_dssp HHCSSCTTCEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 3486799999999888653
No 107
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=48.86 E-value=9 Score=18.95 Aligned_cols=19 Identities=16% Similarity=0.279 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 45 ~~aG-L~~GD~Il~Ing~~v 63 (90)
T 1y7n_A 45 ERGG-VRVGHRIIEINGQSV 63 (90)
T ss_dssp HHHT-CCSSCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999888753
No 108
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=48.63 E-value=13 Score=19.30 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=16.0
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 58 A~~aG~L~~GD~I~~ing~~ 77 (122)
T 1v5q_A 58 AERCGVLQIGDRVMAINGIP 77 (122)
T ss_dssp HHHSCCCCTTCCEEEETTEE
T ss_pred HHHcCCCCCCCEEEEECCEE
Confidence 45578789999999988864
No 109
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=48.62 E-value=10 Score=23.03 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=11.8
Q ss_pred hCCCCCCCCeEEEeec
Q psy255 42 DRKFLNQGDPVIVVTG 57 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g 57 (70)
..|.+++||+|++..+
T Consensus 6 ~~~~~~~Gd~V~~~~~ 21 (336)
T 2b25_A 6 RERPFQAGELILAETG 21 (336)
T ss_dssp --CCCCTTCEEEEEC-
T ss_pred cCCCCCCCCEEEEEeC
Confidence 4678999999999854
No 110
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=48.58 E-value=10 Score=19.90 Aligned_cols=21 Identities=14% Similarity=0.091 Sum_probs=16.4
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.++.||.|+-+-|...
T Consensus 56 A~~aG~L~~GD~Il~vng~~v 76 (129)
T 2kpk_A 56 AALDGKMETGDVIVSVNDTCV 76 (129)
T ss_dssp HHHHSSCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 345687899999999988753
No 111
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=48.36 E-value=22 Score=20.74 Aligned_cols=25 Identities=36% Similarity=0.408 Sum_probs=15.7
Q ss_pred HHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
+.+.++.+.--+++||. +.+|.+.+
T Consensus 172 ~lia~ls~~~tL~~GDv--I~TGTp~G 196 (225)
T 1saw_A 172 YIISYVSKIITLEEGDI--ILTGTPKG 196 (225)
T ss_dssp HHHHHHHTTSCBCTTCE--EECCCCSC
T ss_pred HHHHHHhCCCCcCCCCE--EEcCCCCC
Confidence 34444455667899994 55677643
No 112
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=48.34 E-value=20 Score=22.71 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhC-CCCCCCCeEEEee
Q psy255 32 RVAHGIKYGRDR-KFLNQGDPVIVVT 56 (70)
Q Consensus 32 ~~~~a~~~~~~~-g~~~~GD~vv~~~ 56 (70)
.+-.++..+.+. |.+++||+|++.+
T Consensus 285 Si~l~L~~~l~~~g~~~~Gd~ill~s 310 (388)
T 3v4n_A 285 SLYLGLISLLENATTLTAGNQIGLFS 310 (388)
T ss_dssp HHHHHHHHHHHHCSSCCTTCEEEEEE
T ss_pred HHHHHHHHHHHhcCcCCCCCEEEEEE
Confidence 345566666676 8899999998775
No 113
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=48.15 E-value=9.7 Score=18.66 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=14.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 48 ~~aG-l~~GD~I~~ing~~v 66 (97)
T 2w4f_A 48 ARAG-VRVGDKLLEVNGVAL 66 (97)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 699999999988753
No 114
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=48.06 E-value=9.8 Score=18.42 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 42 ~~aG-l~~GD~I~~ing~~v 60 (90)
T 2he4_A 42 ARSG-LRAQDRLIEVNGQNV 60 (90)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHCC-CCCCCEEEEECCEEC
Confidence 3456 789999999888753
No 115
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=47.99 E-value=12 Score=19.12 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=16.2
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.++.||.|+-+-|.+
T Consensus 54 A~~aG~l~~GD~Il~Vng~~ 73 (109)
T 1wi4_A 54 CYKDGRLKPGDQLVSINKES 73 (109)
T ss_dssp HHHHCSCCTTCBEEEETTSC
T ss_pred HHHCCCCCCCCEEEEECCEE
Confidence 34578789999999988875
No 116
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=47.81 E-value=5.5 Score=20.81 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=15.3
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|++++||.|+-+-|.+
T Consensus 47 ~~aGll~~GD~I~~ing~~ 65 (127)
T 1b8q_A 47 EQSGLIQAGDIILAVNDRP 65 (127)
T ss_dssp HHHSSCCTTTCCCEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 3458889999999888764
No 117
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.62 E-value=15 Score=18.88 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=16.4
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 60 A~~aG~L~~GD~Il~vng~~v 80 (120)
T 2eno_A 60 AALDGRLQEGDKILSVNGQDL 80 (120)
T ss_dssp HHHSCCSCTTCEEEEETTEEC
T ss_pred HHHCCCCCCCCEEEEECCEEC
Confidence 345787899999999888753
No 118
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=47.58 E-value=27 Score=20.74 Aligned_cols=24 Identities=8% Similarity=0.135 Sum_probs=18.2
Q ss_pred HHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
++++.+.+.|. +++|+|+++...+
T Consensus 21 ~~vral~~~g~-~~~d~ViLv~~~~ 44 (244)
T 2wte_A 21 FLLRLLNETSA-QKEDSLVIVVPSP 44 (244)
T ss_dssp HHHHHHHHTTC-CTTSEEEEEEESS
T ss_pred HHHHHHHHhCC-CCCCEEEEEeCCC
Confidence 35666677886 8999999988764
No 119
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=47.57 E-value=10 Score=18.76 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 48 ~~aG-l~~GD~I~~ing~~v 66 (99)
T 3khf_A 48 QEAG-LRAGDLITHINGESV 66 (99)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999988753
No 120
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=47.44 E-value=9.1 Score=19.18 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=15.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 48 ~~aG~L~~GD~Il~ing~~v 67 (103)
T 1uep_A 48 DRDGRLHPGDELVYVDGIPV 67 (103)
T ss_dssp GGGTCCCTTCEEEEETTEEC
T ss_pred HhCCCCCCCCEEEEECCEEC
Confidence 34687899999999988753
No 121
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.39 E-value=10 Score=18.87 Aligned_cols=19 Identities=26% Similarity=0.281 Sum_probs=15.0
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 53 ~aG~l~~GD~I~~vng~~v 71 (104)
T 2djt_A 53 RCGRLEVGDLVLHINGEST 71 (104)
T ss_dssp HHCSCCTTCBEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 3476899999999888753
No 122
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=47.34 E-value=10 Score=19.60 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
-+.|.+++||.|+-+-|.+.
T Consensus 56 ~~aG~l~~GD~Il~Ing~~v 75 (117)
T 1v62_A 56 DRSGALHPGDHILSIDGTSM 75 (117)
T ss_dssp HHHTCCCTTCBEEEETTEET
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34587899999999988753
No 123
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=47.15 E-value=30 Score=20.80 Aligned_cols=26 Identities=31% Similarity=0.241 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+.+.++.+.--+++||. +.+|.+.+
T Consensus 207 ~~lia~ls~~~tL~pGDv--I~TGTp~G 232 (264)
T 2dfu_A 207 AEILSYISTFMTLEPLDV--VLTGTPEG 232 (264)
T ss_dssp HHHHHHHHTTSCBCTTCE--EECCCCSC
T ss_pred HHHHHHHhcCCCcCCCCE--EEeCCCCC
Confidence 344445555667899994 55677644
No 124
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=46.95 E-value=11 Score=19.77 Aligned_cols=21 Identities=24% Similarity=0.378 Sum_probs=16.1
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 72 A~~aG~L~~GD~Il~Vng~~v 92 (123)
T 2iwq_A 72 AGKNGTLKPGDRIVEVDGMDL 92 (123)
T ss_dssp HHHHCCCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 345676799999999988753
No 125
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=46.74 E-value=12 Score=19.37 Aligned_cols=19 Identities=21% Similarity=0.452 Sum_probs=15.4
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|..
T Consensus 68 ~~aG~L~~GD~Il~Vng~~ 86 (117)
T 2byg_A 68 QKDGRLQVGDRLLMVNNYS 86 (117)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 3468789999999988864
No 126
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=46.71 E-value=10 Score=18.99 Aligned_cols=19 Identities=21% Similarity=0.400 Sum_probs=14.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 57 ~~aG-l~~GD~I~~ing~~v 75 (107)
T 3qe1_A 57 DRAG-VRKGDRILEVNGVNV 75 (107)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 799999999888753
No 127
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=46.57 E-value=15 Score=19.00 Aligned_cols=19 Identities=11% Similarity=0.059 Sum_probs=14.6
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 58 ~~AG-L~~GD~Il~VnG~~v 76 (109)
T 2vsv_A 58 SVAG-AREGDYIVSIQLVDC 76 (109)
T ss_dssp HHTT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3457 689999999988753
No 128
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=46.27 E-value=12 Score=18.90 Aligned_cols=19 Identities=32% Similarity=0.379 Sum_probs=14.9
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 54 ~aG~l~~GD~I~~ing~~v 72 (111)
T 2koj_A 54 QDGRLKAGDRLIEVNGVDL 72 (111)
T ss_dssp HHCSSCTTCEEEEETTEEC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 3476799999999888653
No 129
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=46.22 E-value=12 Score=18.80 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 52 ~~aG~L~~GD~I~~ing~~v 71 (106)
T 3axa_A 52 DVDGRLAAGDQLLSVDGRSL 71 (106)
T ss_dssp HHHCCCCTTCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34687899999999888753
No 130
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=46.08 E-value=11 Score=19.46 Aligned_cols=19 Identities=32% Similarity=0.534 Sum_probs=15.4
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|.+
T Consensus 67 ~~aG~L~~GD~Il~Vng~~ 85 (117)
T 2fne_A 67 SEDGRLKRGDQIIAVNGQS 85 (117)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 3467789999999998865
No 131
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.06 E-value=12 Score=19.45 Aligned_cols=18 Identities=17% Similarity=0.433 Sum_probs=14.3
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 58 ~~aG-L~~GD~Il~Ing~~ 75 (114)
T 2d8i_A 58 SKKG-LKAGDEILEINNRA 75 (114)
T ss_dssp HHHT-CCTTCCEEEESSCB
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3457 68999999998875
No 132
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=45.97 E-value=24 Score=22.04 Aligned_cols=26 Identities=0% Similarity=-0.160 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCC-CCCCeEEEee
Q psy255 31 TRVAHGIKYGRDRKFL-NQGDPVIVVT 56 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~-~~GD~vv~~~ 56 (70)
..+-.++..+.+.|.+ ++||+|++++
T Consensus 350 Asi~~~L~~~~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 350 VSLIFVLETMVQQAESAKAISTGVAFA 376 (393)
T ss_dssp HHHHHHHHHHHHSCSSSSSSEEEEEEE
T ss_pred hHHHHHHHHHHhcCccCCCCCeEEEEE
Confidence 3355678888889988 5999998875
No 133
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=45.97 E-value=20 Score=18.56 Aligned_cols=20 Identities=20% Similarity=0.438 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 61 A~~aG~l~~GD~I~~ing~~ 80 (124)
T 1wh1_A 61 AAKDGRIREGDRIIQINGIE 80 (124)
T ss_dssp HHHTCCCCTTCEEEEESSCB
T ss_pred HHHcCCCCCCCEEEEECCEE
Confidence 34567579999999998865
No 134
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=45.84 E-value=14 Score=18.61 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=14.6
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|.+++||.|+-+-|.+.
T Consensus 54 aG~l~~GD~I~~vng~~v 71 (111)
T 2dlu_A 54 DGRLQTGDHILKIGGTNV 71 (111)
T ss_dssp HTCCCSSCEEEEESSCCC
T ss_pred cCCCCCCCEEEEECCEEC
Confidence 476799999999988753
No 135
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=45.62 E-value=17 Score=18.16 Aligned_cols=20 Identities=30% Similarity=0.443 Sum_probs=16.0
Q ss_pred HHhCCC-CCCCCeEEEeeccc
Q psy255 40 GRDRKF-LNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~-~~~GD~vv~~~g~~ 59 (70)
+.+.|. +++||.|+-+-|.+
T Consensus 56 A~~aG~rL~~GD~Il~ing~~ 76 (107)
T 3nfk_A 56 ADLCVPRLNEGDQVVLINGRD 76 (107)
T ss_dssp HHHSSSCCCTTCEEEEETTEE
T ss_pred hHHcCCccCCCCEEEEECCEE
Confidence 446784 89999999988865
No 136
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=45.41 E-value=8.5 Score=19.35 Aligned_cols=19 Identities=11% Similarity=0.060 Sum_probs=15.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 59 ~aG~l~~GD~I~~vng~~v 77 (108)
T 2jre_A 59 LDGRIEPNDKILRVDDVNV 77 (108)
T ss_dssp HHSSCCSSEEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 3486899999999988753
No 137
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=45.31 E-value=12 Score=19.28 Aligned_cols=19 Identities=21% Similarity=0.188 Sum_probs=15.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 65 ~aG~L~~GD~I~~Ing~~v 83 (114)
T 2gzv_A 65 LDGTVAAGDEITGVNGRSI 83 (114)
T ss_dssp HHCCCCTTCEEEEETTEEC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 4576899999999988753
No 138
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=45.24 E-value=33 Score=20.40 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
+-.++..+.+.|.+++||++++.+-
T Consensus 274 ~~~~L~~~~~~~~~~~g~~vl~~~~ 298 (313)
T 1zow_A 274 IPLSIDQELKNGKLKDDDTIVLVGF 298 (313)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 3445666777899999999987753
No 139
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=45.07 E-value=19 Score=19.23 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=16.5
Q ss_pred HHHHHhCCCCCCCCeEEEeecc
Q psy255 37 IKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 37 ~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.++++++++ +.||.+++.-..
T Consensus 84 ~~FV~~~~L-~~GD~~~F~~~~ 104 (130)
T 1wid_A 84 SRFVKEKNL-RAGDVVSFSRSN 104 (130)
T ss_dssp HHHHHHTTC-CTTCEEEEEECC
T ss_pred HHHHHHcCC-CCCCEEEEEEec
Confidence 467788887 799999987653
No 140
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=45.02 E-value=23 Score=22.77 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=18.4
Q ss_pred HHHHHHHHHhC-CCCCCCCeEEEee
Q psy255 33 VAHGIKYGRDR-KFLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~-g~~~~GD~vv~~~ 56 (70)
+-.++..+.+. |.+++||+|++.+
T Consensus 316 i~l~L~~~l~~~g~l~~Gd~ill~s 340 (425)
T 3sqz_A 316 LFLGLLSLLENSQNLVAGDKIALFS 340 (425)
T ss_dssp HHHHHHHHHHHCSSCCTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEc
Confidence 45566677776 8889999998775
No 141
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=44.85 E-value=12 Score=18.82 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=15.4
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 57 ~aG~L~~GD~I~~vng~~v 75 (108)
T 1q7x_A 57 SDGRIHKGDRVLAVNGVSL 75 (108)
T ss_dssp HHTCCCSSCEEEEETTEEC
T ss_pred HCCCCCCCCEEEEECCEEC
Confidence 4676899999999988753
No 142
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=44.77 E-value=24 Score=19.30 Aligned_cols=20 Identities=5% Similarity=0.056 Sum_probs=11.7
Q ss_pred HHHHHHHhCCCCCCCCeEEEee
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
++++.+++ .+++||.|++..
T Consensus 127 eai~~~~~--~~~~gDvVLv~G 146 (163)
T 3mvn_A 127 ELVMRIVQ--QAKPNDHILIMS 146 (163)
T ss_dssp HHHHHHHH--HCCTTCEEEEEC
T ss_pred HHHHHHHH--hCCCCCEEEEEC
Confidence 34444443 357899777654
No 143
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=44.76 E-value=12 Score=19.00 Aligned_cols=20 Identities=15% Similarity=0.136 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 49 ~~aG~l~~GD~I~~vng~~v 68 (113)
T 2g5m_B 49 HRDGRIQVNDLLVEVDGTSL 68 (113)
T ss_dssp HHHTCSCTTCBEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34687799999999888653
No 144
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=44.72 E-value=12 Score=19.00 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=15.0
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 58 ~aG~L~~GD~I~~vng~~v 76 (116)
T 2dm8_A 58 RDGRLWAGDQILEVNGVDL 76 (116)
T ss_dssp HHTCCCTTCEEEEETTEEC
T ss_pred hCCCCCCCCEEEEECCEEC
Confidence 3486899999999888653
No 145
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=44.70 E-value=5.9 Score=19.68 Aligned_cols=18 Identities=22% Similarity=0.219 Sum_probs=14.3
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|.+++||.|+-+-|.+.
T Consensus 47 aG~L~~GD~I~~Ing~~v 64 (96)
T 2qkv_A 47 DSKLQRGDIITKFNGDAL 64 (96)
T ss_dssp HHHCCTTCEEEEETTEEC
T ss_pred cCCCCCCCEEEEECCEEC
Confidence 465789999999988753
No 146
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=44.56 E-value=43 Score=20.56 Aligned_cols=27 Identities=11% Similarity=0.001 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.-....+..+.+.|.+++|+.||++++
T Consensus 53 R~a~~~i~~a~~~g~l~~g~~vvv~aS 79 (334)
T 3tbh_A 53 RLGFAIYDKAEKEGKLIPGKSIVVESS 79 (334)
T ss_dssp HHHHHHHHHHHHTTSCCTTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeC
Confidence 345566778889999999998755544
No 147
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=44.55 E-value=12 Score=19.20 Aligned_cols=21 Identities=19% Similarity=0.136 Sum_probs=16.2
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 62 A~~aG~L~~GD~Il~vng~~v 82 (117)
T 1ujd_A 62 AEQTGKLMEGMQVLEWNGIPL 82 (117)
T ss_dssp HHHHSSCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEc
Confidence 344687899999999988753
No 148
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=44.43 E-value=14 Score=19.25 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=15.8
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|..
T Consensus 66 A~~aG~L~~GD~Il~VNg~~ 85 (118)
T 3b76_A 66 ISRDGRIKTGDILLNVDGVE 85 (118)
T ss_dssp HHHHCSSCTTCEEEEETTEE
T ss_pred HHHCCCCCCCCEEEEECCEE
Confidence 34568789999999988864
No 149
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=44.40 E-value=17 Score=19.20 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=16.7
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 78 A~~aG~L~~GD~Il~ing~~v 98 (131)
T 1wfg_A 78 ADTVGHLRPGDEVLEWNGRLL 98 (131)
T ss_dssp HHHTSCCCTTCEEEEETTEEC
T ss_pred HHHcCCCCCCCEEEEECCEEC
Confidence 445787899999999988753
No 150
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=44.16 E-value=13 Score=19.32 Aligned_cols=21 Identities=19% Similarity=0.169 Sum_probs=16.5
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.++-+-|.+.
T Consensus 58 A~~aG~L~~GD~Il~ing~~v 78 (125)
T 3hpk_A 58 AALDGTVAAGDEITGVNGRSI 78 (125)
T ss_dssp HHHHCCCCTTCEEEEETTEEC
T ss_pred HHHCCCCCCCCEEEEECCEEC
Confidence 445687899999999988753
No 151
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=44.15 E-value=12 Score=21.20 Aligned_cols=13 Identities=15% Similarity=0.355 Sum_probs=11.1
Q ss_pred CCCCCCCeEEEee
Q psy255 44 KFLNQGDPVIVVT 56 (70)
Q Consensus 44 g~~~~GD~vv~~~ 56 (70)
|.++.||+|++-.
T Consensus 2 ~~~~~Gd~V~~~~ 14 (248)
T 2yvl_A 2 NSFKEGEYVLIRF 14 (248)
T ss_dssp CCCCTTCEEEEEE
T ss_pred CcCCCCCEEEEEe
Confidence 5689999999975
No 152
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=43.91 E-value=18 Score=17.30 Aligned_cols=18 Identities=28% Similarity=0.544 Sum_probs=14.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 41 ~aG-L~~GD~I~~ing~~v 58 (87)
T 2pa1_A 41 DAD-LRPGDIIVAINGESA 58 (87)
T ss_dssp HTT-CCTTCEEEEETTEES
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 456 589999999888753
No 153
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=43.69 E-value=13 Score=19.55 Aligned_cols=19 Identities=21% Similarity=0.414 Sum_probs=15.2
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.| +++||.|+-+-|.+
T Consensus 64 A~~aG-L~~GD~Il~Vng~~ 82 (124)
T 3tsv_A 64 AAKEG-LEEGDQILRVNNVD 82 (124)
T ss_dssp HHHTT-CCTTEEEEEETTEE
T ss_pred HHHcC-CCCCCEEEEECCEE
Confidence 44578 79999999988865
No 154
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=43.65 E-value=15 Score=21.94 Aligned_cols=14 Identities=29% Similarity=0.147 Sum_probs=11.1
Q ss_pred CCCCCCCeEEEeec
Q psy255 44 KFLNQGDPVIVVTG 57 (70)
Q Consensus 44 g~~~~GD~vv~~~g 57 (70)
+.+++||+|.++.=
T Consensus 223 d~~~PGDrV~vtGI 236 (268)
T 2vl6_A 223 DSARPGDRVKVTGI 236 (268)
T ss_dssp TSSCTTCEEEEEEE
T ss_pred CcccCCCEEEEEEE
Confidence 46799999997753
No 155
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=43.53 E-value=45 Score=20.96 Aligned_cols=29 Identities=17% Similarity=0.270 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+...++.+++.|+. .+.+||..|..
T Consensus 231 ~D~~iG~ll~~Lk~~g~~--dnTiIVf~sDH 259 (424)
T 2w5q_A 231 LDEALEEYINDLKKKGLY--DNSVIMIYGDH 259 (424)
T ss_dssp HHHHHHHHHHHHHHTTCS--TTSEEEEEECS
T ss_pred HHHHHHHHHHHHHhcCCc--CCeEEEEECCC
Confidence 466788889999999984 56777776665
No 156
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=43.34 E-value=17 Score=20.06 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=13.7
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
..++.||.|+++-....
T Consensus 75 n~L~dGDsVtvIKDLKV 91 (138)
T 2akl_A 75 NVLQDGDTITVIKDLKV 91 (138)
T ss_dssp CBCCTTCEEECCSCEEC
T ss_pred CCccCCCeEEEEeeccc
Confidence 47899999999876643
No 157
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=43.00 E-value=15 Score=19.12 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=15.5
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 60 ~~aG~L~~GD~I~~vng~~v 79 (129)
T 2dmz_A 60 YHNGHIQVNDKIVAVDGVNI 79 (129)
T ss_dssp HHHTCCCSSCBEEEETTBCC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34576899999999988753
No 158
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=42.92 E-value=10 Score=18.80 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 48 A~~aG~l~~GD~I~~vng~~ 67 (104)
T 3i4w_A 48 ADLSGELRKGDQILSVNGVD 67 (104)
T ss_dssp HHHHCCCCTTEEEEEETTEE
T ss_pred HHhcCCCCCCCEEEEECCEE
Confidence 34468789999999988765
No 159
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=42.66 E-value=50 Score=21.31 Aligned_cols=33 Identities=6% Similarity=0.084 Sum_probs=21.2
Q ss_pred CCCHHHHHHHHHHHHHhC-CCCCCCCeEEEeecc
Q psy255 26 LRDVDTRVAHGIKYGRDR-KFLNQGDPVIVVTGW 58 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~-g~~~~GD~vv~~~g~ 58 (70)
+.+.+..++...+.+.+. --+++|+.|+|.+..
T Consensus 4 ~~~~~~~l~k~A~~lV~~~~~lq~Ge~VlI~~~~ 37 (418)
T 1zjc_A 4 MTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSV 37 (418)
T ss_dssp --CHHHHHHHHHHHHHHTTTCCCTTCCEEEEEET
T ss_pred ccchHHHHHHHHHHHHHhCcCCCCCCEEEEEECC
Confidence 345455555555555554 478999999998764
No 160
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=42.60 E-value=12 Score=19.38 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 65 ~~aG~L~~GD~Il~Ing~~v 84 (124)
T 2daz_A 65 AADGRMRIGDELLEINNQIL 84 (124)
T ss_dssp HHHTCCCTTCEECEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34587899999999888753
No 161
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=42.17 E-value=16 Score=17.47 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=10.9
Q ss_pred CCCCCCCeEEEeec
Q psy255 44 KFLNQGDPVIVVTG 57 (70)
Q Consensus 44 g~~~~GD~vv~~~g 57 (70)
-.+++||.++++..
T Consensus 59 ~~l~~GD~l~v~g~ 72 (86)
T 3jxo_A 59 TEILSGDKLYVIVS 72 (86)
T ss_dssp CBCCTTCEEEEEEE
T ss_pred CEECCCCEEEEEEC
Confidence 35789999988754
No 162
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=41.74 E-value=34 Score=20.27 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.-.++..+.++|.+++||++++.+-
T Consensus 272 ~~~~L~~~~~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 272 IPIALHEAIKEGKVKRGDLILMTAM 296 (309)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 3345566677788999999987753
No 163
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=41.66 E-value=14 Score=18.64 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 60 ~~aG-L~~GD~I~~ing~~v 78 (110)
T 1x5q_A 60 ARAG-VRVGDKLLEVNGVAL 78 (110)
T ss_dssp HHHT-CCTTCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3456 799999999888753
No 164
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=41.28 E-value=11 Score=18.49 Aligned_cols=19 Identities=26% Similarity=0.372 Sum_probs=14.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 43 ~~aG-L~~GD~I~~ing~~v 61 (93)
T 2dls_A 43 MKAG-VKEGDRIIKVNGTMV 61 (93)
T ss_dssp TTTT-CCSSCEEEEETTEEC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3456 799999999888753
No 165
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=41.07 E-value=17 Score=21.93 Aligned_cols=14 Identities=36% Similarity=0.323 Sum_probs=11.1
Q ss_pred CCCCCCCeEEEeec
Q psy255 44 KFLNQGDPVIVVTG 57 (70)
Q Consensus 44 g~~~~GD~vv~~~g 57 (70)
+.+++||+|.++.=
T Consensus 210 d~~~PGDrV~vtGI 223 (279)
T 1ltl_A 210 DTLTPGDIVRVTGT 223 (279)
T ss_dssp TCCCTTCEEEEEEE
T ss_pred CccCCCCEEEEEEE
Confidence 46789999998753
No 166
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=40.92 E-value=14 Score=18.82 Aligned_cols=20 Identities=25% Similarity=0.411 Sum_probs=15.7
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 64 ~~aG~L~~GD~Il~vng~~v 83 (117)
T 2ehr_A 64 GKTNALKTGDKILEVSGVDL 83 (117)
T ss_dssp TSSCSCCTTCEEEEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 45676899999999888753
No 167
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=40.90 E-value=13 Score=18.45 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=14.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 50 ~aG-L~~GD~I~~ing~~v 67 (101)
T 1uez_A 50 KEG-LRVGDQILRVNDKSL 67 (101)
T ss_dssp HHT-CCSSCCEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 347 799999999888753
No 168
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=40.85 E-value=29 Score=20.08 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=12.7
Q ss_pred CCCCCCCCeEEEeec
Q psy255 43 RKFLNQGDPVIVVTG 57 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g 57 (70)
.+.+++||.|++...
T Consensus 4 ~~~~~~Gd~v~~~~~ 18 (280)
T 1i9g_A 4 TGPFSIGERVQLTDA 18 (280)
T ss_dssp CCSCCTTCEEEEEET
T ss_pred CCcCCCCCEEEEEEC
Confidence 577999999999864
No 169
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=40.70 E-value=59 Score=20.55 Aligned_cols=30 Identities=13% Similarity=0.168 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeecccC
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
.|..+...++.+++.|+. .+.+||..|...
T Consensus 231 ~D~~iG~ll~~Lk~~gl~--dnTiIv~tsDHG 260 (436)
T 2w8d_A 231 LDQSIEQFFNDLKKDGLY--DKSIIVMYGDHY 260 (436)
T ss_dssp HHHHHHHHHHHHHHTTCS--TTEEEEEEECSC
T ss_pred HHHHHHHHHHHHHhcCCc--CCeEEEEECCCC
Confidence 466788888999999984 567777777653
No 170
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.68 E-value=14 Score=18.26 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=15.2
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.| +++||.|+-+-|.+.
T Consensus 49 A~~aG-L~~GD~I~~ing~~v 68 (100)
T 2eeh_A 49 AERAG-LCVGDKITEVNGLSL 68 (100)
T ss_dssp HHHHT-CCSSCEEEEETTEEC
T ss_pred HHHcC-CCCCCEEEEECCEEC
Confidence 34456 689999999888753
No 171
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=40.38 E-value=57 Score=19.65 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=24.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 23 ADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 23 ~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.+...++.+...++.+.++++|+ +.+.+++++.
T Consensus 120 E~~S~nT~ENa~~s~~ll~~~g~--~~~~iiLVTs 152 (266)
T 3ca8_A 120 EDQSTNCGENARFSIALLNQAVE--RVHTAIVVQD 152 (266)
T ss_dssp ECCCCSHHHHHHHHHHHHHTCSS--CCSCEEEECC
T ss_pred CCCCccHHHHHHHHHHHHHhcCC--CCCeEEEECC
Confidence 34557888888999999999997 4455665553
No 172
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=40.33 E-value=15 Score=19.08 Aligned_cols=19 Identities=32% Similarity=0.379 Sum_probs=14.9
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 73 ~aG~L~~GD~Il~Ing~~v 91 (121)
T 2kom_A 73 QDGRLKAGDRLIEVNGVDL 91 (121)
T ss_dssp HHTCCCSSSEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEc
Confidence 3476799999999988653
No 173
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=40.28 E-value=30 Score=18.24 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeE
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPV 52 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~v 52 (70)
-..+...++..+..|-+++||++
T Consensus 16 Y~QI~~~i~~~I~~G~l~pG~~L 38 (134)
T 4ham_A 16 YEQIVQKIKEQVVKGVLQEGEKI 38 (134)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Confidence 45677778888888989999986
No 174
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=40.26 E-value=16 Score=18.61 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=14.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 52 ~~aG-L~~GD~I~~ing~~v 70 (114)
T 2edz_A 52 EKAG-LLDGDRVLRINGVFV 70 (114)
T ss_dssp GGGT-CCTTCEEEEESSSBC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 4467 699999999988753
No 175
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=39.28 E-value=9.1 Score=19.68 Aligned_cols=20 Identities=15% Similarity=0.395 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 55 A~~aG~L~~GD~Il~ing~~ 74 (119)
T 1x6d_A 55 ASQEGTIQKGNEVLSINGKS 74 (119)
T ss_dssp HHHHTSSCTTCBCCEETTEE
T ss_pred HHHcCCCCCCCEEEEECCEE
Confidence 34568789999999888864
No 176
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=39.26 E-value=16 Score=18.13 Aligned_cols=19 Identities=26% Similarity=0.330 Sum_probs=14.8
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.| +++||.|+-+-|.+.
T Consensus 44 ~~aG-l~~GD~I~~ing~~v 62 (102)
T 2d90_A 44 EAAG-LKNNDLVVAVNGKSV 62 (102)
T ss_dssp TTTT-CCTTCEEEEESSCBC
T ss_pred HHcC-CCCCCEEEEECCEEC
Confidence 3456 699999999988753
No 177
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=38.79 E-value=16 Score=18.21 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=14.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 56 ~aG-L~~GD~I~~ing~~v 73 (104)
T 1wi2_A 56 RAG-LQEGDQVLAVNDVDF 73 (104)
T ss_dssp HHT-CCTTCEEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 356 799999999888753
No 178
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=38.76 E-value=16 Score=18.15 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=13.6
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.| +++||.|+-+-|.+.
T Consensus 52 aG-L~~GD~I~~vng~~v 68 (100)
T 1whd_A 52 AG-LQQLDTVLQLNERPV 68 (100)
T ss_dssp HT-CCSSCEEEEETTEEC
T ss_pred cC-CCCCCEEEEECCEEC
Confidence 46 699999999888753
No 179
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=38.75 E-value=60 Score=19.10 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=25.1
Q ss_pred CHHHHHHHHHH---------------HHHhCCCCCCCCeEEEeecccCC
Q psy255 28 DVDTRVAHGIK---------------YGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 28 ~~~~~~~~a~~---------------~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+-+.+.++++ .+.+.|++.. +.||.+.|...+
T Consensus 123 ~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT~~G 170 (201)
T 1vp8_A 123 SRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGRSRG 170 (201)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECSSSS
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccccCC
Confidence 35566666666 5779999999 999999988543
No 180
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=38.56 E-value=24 Score=16.97 Aligned_cols=18 Identities=22% Similarity=0.444 Sum_probs=14.2
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 33 ~~aG-l~~GD~I~~ing~~ 50 (87)
T 2i6v_A 33 ESIG-LQDGDMAVALNGLD 50 (87)
T ss_dssp HHTT-CCTTCEEEEETTEE
T ss_pred HHCC-CCCCCEEEEECCEE
Confidence 3456 58999999998865
No 181
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=38.45 E-value=16 Score=19.56 Aligned_cols=19 Identities=32% Similarity=0.671 Sum_probs=14.6
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.| +++||.|+-+-|.+
T Consensus 77 A~~aG-L~~GD~I~~vng~~ 95 (139)
T 2vz5_A 77 AEIAG-LQIGDKIMQVNGWD 95 (139)
T ss_dssp HHHHT-CCTTCEEEEETTEE
T ss_pred HHHCC-CCCCCEEEEECCEE
Confidence 34457 78999999988864
No 182
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.20 E-value=17 Score=19.28 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=11.9
Q ss_pred hCCCCCCCCeEEEee
Q psy255 42 DRKFLNQGDPVIVVT 56 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~ 56 (70)
+.=++.+||.|++--
T Consensus 50 k~IwI~~GD~VlVe~ 64 (111)
T 2dgy_A 50 KNIWIKRGDFLIVDP 64 (111)
T ss_dssp SCCCCCSSCEEEEEE
T ss_pred ccEEEcCCCEEEEEe
Confidence 466899999998863
No 183
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=38.13 E-value=19 Score=17.84 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.3
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
|-+++||.|+-+-|.+.
T Consensus 54 ggl~~GD~I~~Ing~~v 70 (101)
T 2yt7_A 54 GALSIGDRLTAINGTSL 70 (101)
T ss_dssp SSCCTTCEEEEESSCBC
T ss_pred CCCCCCCEEEEECCEEC
Confidence 77899999999988754
No 184
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=38.08 E-value=78 Score=20.22 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+-..++.+++.|+ ..+.+||..+..
T Consensus 286 ~D~~iG~ll~~L~~~g~--~dnTiIiftSDH 314 (491)
T 2qzu_A 286 VDENVGRIIEALKQNNL--FDNTIVVFTSDH 314 (491)
T ss_dssp HHHHHHHHHHHHHHTTC--STTEEEEEECSC
T ss_pred HHHHHHHHHHHHHHcCC--cCCeEEEEECcC
Confidence 46668888999999998 467787777765
No 185
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=38.02 E-value=35 Score=20.41 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=16.9
Q ss_pred HHHHHHhCCCCCCCCeEEEeec
Q psy255 36 GIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 36 a~~~~~~~g~~~~GD~vv~~~g 57 (70)
++..+.++|.+++||++++.+-
T Consensus 285 ~l~~~l~~g~~~~g~~~l~~~~ 306 (322)
T 1ub7_A 285 ALKEAVDAGRIREGDHVLLVSF 306 (322)
T ss_dssp HHHHHHHHTSSCTTCEEEEEEE
T ss_pred HHHHHHHhCCCCCCCEEEEEEE
Confidence 5556677799999999887753
No 186
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=37.78 E-value=24 Score=18.16 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=15.4
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|-+++||.|+-+-|.+.
T Consensus 57 ~~aggL~~GD~Il~Ing~~v 76 (118)
T 1v6b_A 57 ERHGGVVKGDEIMAINGKIV 76 (118)
T ss_dssp HHHCSSCTTCEEEEESSCBC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34556799999999988753
No 187
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.41 E-value=13 Score=18.61 Aligned_cols=18 Identities=22% Similarity=0.178 Sum_probs=14.2
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 47 ~aG-l~~GD~I~~vng~~v 64 (106)
T 2eei_A 47 RAG-VLADDHLIEVNGENV 64 (106)
T ss_dssp HHT-CCSSEEEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 347 799999999888753
No 188
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=37.40 E-value=14 Score=18.95 Aligned_cols=19 Identities=26% Similarity=0.333 Sum_probs=15.0
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|.+++||.|+-+-|.+.
T Consensus 53 ~aG~L~~GD~I~~vng~~v 71 (119)
T 1tp5_A 53 LSGELRKGDQILSVNGVDL 71 (119)
T ss_dssp HHSCCCTTEEEEEETTEEC
T ss_pred HcCCCCCCCEEEEECCEEC
Confidence 3476799999999988753
No 189
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=37.30 E-value=26 Score=17.75 Aligned_cols=19 Identities=16% Similarity=0.419 Sum_probs=14.6
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+-+.| +++||.|+-+-|.+
T Consensus 48 A~~aG-L~~GD~Il~vng~~ 66 (94)
T 3kzd_A 48 ASKKG-LKAGDEILEINNRA 66 (94)
T ss_dssp HHHTT-CCTTCEEEEETTEE
T ss_pred HHHcC-CCCCCEEEEECCEE
Confidence 34567 69999999888764
No 190
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=37.20 E-value=49 Score=21.29 Aligned_cols=26 Identities=38% Similarity=0.424 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+.+.++.+.--+++||. +.+|.+.+
T Consensus 373 ~~lia~ls~~~tL~~GDv--I~TGTp~g 398 (429)
T 1gtt_A 373 PFLIAYLSEFMTLNPGDM--IATGTPKG 398 (429)
T ss_dssp HHHHHHHHTTSCBCTTCE--EECCCCSC
T ss_pred HHHHHHHhCCCCcCCCCE--EEcCCCCC
Confidence 334455555677899994 46677644
No 191
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=37.10 E-value=18 Score=18.73 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=14.4
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 47 ~~aG-l~~GD~I~~ing~~ 64 (128)
T 2kjd_A 47 EASG-LRAQDRIVEVNGVC 64 (128)
T ss_dssp HHHT-CCTTCEEEEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3457 79999999988865
No 192
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=36.69 E-value=20 Score=16.87 Aligned_cols=13 Identities=54% Similarity=0.790 Sum_probs=9.4
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
++--||+||+++-
T Consensus 15 fivigdrvvvt~t 27 (65)
T 1mhx_A 15 FIVIGDRVVVVTT 27 (65)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEEcCEEEEEEe
Confidence 3456999998764
No 193
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=36.19 E-value=13 Score=18.95 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=13.4
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.| +++||.|+-+-|.+
T Consensus 58 aG-L~~GD~Il~vng~~ 73 (117)
T 1uit_A 58 AG-LEYGDQLLEFNGIN 73 (117)
T ss_dssp HT-CCTTCEECEETTEE
T ss_pred cC-CCCCCEEEEECCEE
Confidence 47 79999999988865
No 194
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=35.95 E-value=51 Score=20.01 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEE-eec
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIV-VTG 57 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~-~~g 57 (70)
..+.....+.+.+.+++.+|++|++ +||
T Consensus 5 ~~~~~~~~~~i~~~~l~~~~~~vlva~SG 33 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKIFSGERRVLIAFSG 33 (317)
T ss_dssp HHHHHHHHHHHHHHCSCSSCCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEEecc
Confidence 3456667777888899999998775 444
No 195
>2joi_A Hypothetical protein TA0095; structural genomics, COG4004 orthologous group, structural genomics consortium, SGC, unknown function; NMR {Thermoplasma acidophilum}
Probab=35.85 E-value=38 Score=18.24 Aligned_cols=47 Identities=13% Similarity=-0.003 Sum_probs=24.8
Q ss_pred Hhhhcccc-----eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 10 PKQVLIGK-----IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 10 ~r~l~l~~-----v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
..+-+||| -+|+.-....+. +.+...++...-. ..+.||.+++.-|.
T Consensus 12 ~~~~~~~~~~~MqeY~~KRG~k~~l-erI~~~l~e~Fg~-~~~~g~~~~~SyGa 63 (118)
T 2joi_A 12 SGRENLYFQGHMREYPVKKGFPTDY-DSIKRKISELGFD-VKSEGDLIIASIPG 63 (118)
T ss_dssp -----------CEEECCCSSSCCSH-HHHHHHHHHHTCE-EEEETTEEEEECTT
T ss_pred cccchhhhhhhhhccccccCCCCcH-HHHHHHHHHHcCC-ceecCCEEEEEecc
Confidence 34567899 455544444555 6666666544444 67789998887765
No 196
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=35.79 E-value=27 Score=16.45 Aligned_cols=17 Identities=35% Similarity=0.638 Sum_probs=13.6
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.| +++||.|+-+-|.+.
T Consensus 41 aG-l~~GD~I~~vng~~v 57 (85)
T 1rgw_A 41 SQ-LSQGDLVVAIDGVNT 57 (85)
T ss_dssp SS-CCCCSBEEEETTEEC
T ss_pred cC-CCCCCEEEEECCEEC
Confidence 46 689999999988753
No 197
>2phn_A F420-0:gamma-glutamyl ligase; coenzyme F420 biosynthesis, amide BON enzyme, metal dependent, NEW fold, GDP binding, MCSG; HET: GDP; 1.35A {Archaeoglobus fulgidus dsm 4304} SCOP: d.340.1.1 PDB: 2g9i_A
Probab=35.51 E-value=29 Score=21.09 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=14.1
Q ss_pred HhCCCCCCCCeEEEeecc
Q psy255 41 RDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~ 58 (70)
.....+++||.+++.+..
T Consensus 28 ~~~~~l~dgDilvvaeki 45 (254)
T 2phn_A 28 SSRVRFEDGDVLVVCSTV 45 (254)
T ss_dssp HTTSCCCTTCEEEEEHHH
T ss_pred hcCCCCCCCCEEEEechH
Confidence 356678999999988754
No 198
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.16 E-value=21 Score=17.18 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=14.2
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|-+++||.|+-+-|.+.
T Consensus 46 aGgl~~GD~I~~vng~~v 63 (93)
T 2dkr_A 46 HGGLKRGDQLLSVNGVSV 63 (93)
T ss_dssp HCCCCTTCBEEEETTEEC
T ss_pred cCCCCCCCEEEEECCEEC
Confidence 365799999999988653
No 199
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=34.73 E-value=30 Score=19.27 Aligned_cols=20 Identities=25% Similarity=0.401 Sum_probs=15.9
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|.+++||.|+-+-|.+.
T Consensus 50 ~~aG~l~~GD~I~~vng~~v 69 (196)
T 1p1d_A 50 ERCGVLQIGDRVMAINGIPT 69 (196)
T ss_dssp HHTSCCCSSCCEEEETTBCS
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34587899999999988753
No 200
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=34.73 E-value=20 Score=20.10 Aligned_cols=19 Identities=21% Similarity=0.531 Sum_probs=15.3
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.| +++||.|+-+-|.+
T Consensus 123 A~~aG-L~~GD~Il~vng~~ 141 (192)
T 3k1r_A 123 ADSVG-LQVGDEIVRINGYS 141 (192)
T ss_dssp HHHTT-CCTTEEEEEETTEE
T ss_pred HHHcC-CCCCCEEEEECCEE
Confidence 44568 89999999998875
No 201
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=34.62 E-value=16 Score=18.49 Aligned_cols=18 Identities=28% Similarity=0.429 Sum_probs=14.5
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 56 ~aG-L~~GD~Il~vng~~v 73 (114)
T 1x5n_A 56 EVG-LEIGDQIVEVNGVDF 73 (114)
T ss_dssp TTT-CCTTCEEEEETTEET
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 357 799999999988754
No 202
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=34.48 E-value=16 Score=19.07 Aligned_cols=15 Identities=40% Similarity=0.744 Sum_probs=11.6
Q ss_pred HhCCCCCCCCeEEEe
Q psy255 41 RDRKFLNQGDPVIVV 55 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~ 55 (70)
+.+=++.+||.|++-
T Consensus 54 Rk~IwI~~GD~VlVe 68 (102)
T 1jt8_A 54 KNRIWVREGDVVIVK 68 (102)
T ss_dssp HHHHCCCSCEEEEEC
T ss_pred eeeEEecCCCEEEEE
Confidence 346689999988874
No 203
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=34.43 E-value=54 Score=21.12 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+-..++.|++.|+. .+.+||..+..
T Consensus 235 ~D~~vG~il~~L~~~gl~--dnTiViftSDh 263 (502)
T 4fdi_A 235 IDDSIGKILELLQDLHVA--DNTFVFFTSDN 263 (502)
T ss_dssp HHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCC--cCceEEEecCC
Confidence 577788899999999984 56777776654
No 204
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=34.29 E-value=27 Score=21.35 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=15.1
Q ss_pred CCCCCeEEEeecccCCCCCC
Q psy255 46 LNQGDPVIVVTGWKKGAGFT 65 (70)
Q Consensus 46 ~~~GD~vv~~~g~~~~~g~t 65 (70)
++.=|.||+++|.+..+|.|
T Consensus 67 ~~~aDvVvitAG~prkpGmt 86 (294)
T 2x0j_A 67 LKGSEIIVVTAGLARKPGMT 86 (294)
T ss_dssp GTTCSEEEECCCCCCCSSSC
T ss_pred hCCCCEEEEecCCCCCCCCc
Confidence 55668899999988777643
No 205
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=34.18 E-value=51 Score=20.41 Aligned_cols=27 Identities=15% Similarity=0.427 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|+.+-.+++.+++.| +.+|++.+..
T Consensus 276 ~~D~~vG~il~~L~~~g-----nTlviftsDh 302 (375)
T 2w5v_A 276 DFDDAIGTALAFAKKDG-----NTLVIVTSDH 302 (375)
T ss_dssp HHHHHHHHHHHHHHHHS-----SEEEEEECSC
T ss_pred HHHHHHHHHHHHHhhCC-----CEEEEEECcC
Confidence 35667778888899887 6777666554
No 206
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=34.11 E-value=62 Score=20.38 Aligned_cols=15 Identities=7% Similarity=-0.077 Sum_probs=12.2
Q ss_pred hCCCCCCC---CeEEEee
Q psy255 42 DRKFLNQG---DPVIVVT 56 (70)
Q Consensus 42 ~~g~~~~G---D~vv~~~ 56 (70)
+.|.+++| |++++++
T Consensus 355 ~~g~~~~G~~~d~vll~~ 372 (393)
T 3ov2_A 355 VEGRSTTGDGLQWGVLLG 372 (393)
T ss_dssp HTTCSBTTTTCSEEEEEE
T ss_pred hcCCcCCCCCCCeEEEEE
Confidence 45999999 9888765
No 207
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=34.03 E-value=24 Score=19.72 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=15.6
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
-+.|.++.||.|+-+-|..
T Consensus 125 ~~aG~L~~GD~Il~VNG~~ 143 (170)
T 3egg_C 125 HRDGRIQVNDLLVEVDGTS 143 (170)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHCCCCCCCCEEEEECCEE
Confidence 3468889999999998874
No 208
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=33.93 E-value=31 Score=16.99 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=13.8
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 16 ~~aG-l~~GD~I~~ing~~ 33 (95)
T 3id1_A 16 AEAQ-IAPGTELKAVDGIE 33 (95)
T ss_dssp HHTT-CCTTCEEEEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3456 58999999988764
No 209
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=33.91 E-value=25 Score=16.87 Aligned_cols=19 Identities=26% Similarity=0.354 Sum_probs=14.7
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.|-+++||.|+-+-|.+.
T Consensus 45 ~aggl~~GD~I~~ing~~v 63 (90)
T 1qav_A 45 QTEALFVGDAILSVNGEDL 63 (90)
T ss_dssp HTTCCCTTEEEEEETTEEC
T ss_pred hcCCCCCCCEEEEECCEEC
Confidence 3455799999999988753
No 210
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=33.89 E-value=36 Score=16.64 Aligned_cols=29 Identities=14% Similarity=0.075 Sum_probs=18.8
Q ss_pred cccceeeecCCCCCCHHHHHHHHHHHHHh
Q psy255 14 LIGKIEPSPADWLRDVDTRVAHGIKYGRD 42 (70)
Q Consensus 14 ~l~~v~~~~~~~~~~~~~~~~~a~~~~~~ 42 (70)
+.|++..+...+..+-|+.++.|++.+-+
T Consensus 3 ~vyKviElvGsS~~S~edAi~nAi~~Ask 31 (72)
T 3onr_A 3 SVYKVIDIIGTSPTSWEQAAAEAVQRARD 31 (72)
T ss_dssp CEEEEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHHHHHh
Confidence 34445555555567888888888876653
No 211
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.72 E-value=13 Score=18.79 Aligned_cols=20 Identities=20% Similarity=0.332 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 45 A~~aG~L~~GD~Il~Vng~~ 64 (103)
T 1ufx_A 45 AHNCGQLKVGHVILEVNGLT 64 (103)
T ss_dssp HHHHCSSCTTCBCCEETTEE
T ss_pred HHHCCCCCCCCEEEEECCEE
Confidence 44568789999999888764
No 212
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=33.60 E-value=32 Score=17.50 Aligned_cols=17 Identities=18% Similarity=0.085 Sum_probs=13.8
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
+.++.||.|.+...-|.
T Consensus 48 n~~k~GD~V~I~E~RPl 64 (89)
T 1qd7_I 48 NEAKVGDIVKIMETRPL 64 (89)
T ss_pred cCCCCCCEEEEEEcccC
Confidence 45899999999888663
No 213
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.57 E-value=11 Score=19.13 Aligned_cols=20 Identities=15% Similarity=0.037 Sum_probs=15.7
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.+.|.+++||.|+-+-|.+
T Consensus 57 A~~aG~L~~GD~Il~vng~~ 76 (111)
T 1uju_A 57 AGRDGRLRVGLRLLEVNQQS 76 (111)
T ss_dssp HHHHSSCCTTCBCCBBSSCB
T ss_pred HHHcCCCCCCCEEEEECCEE
Confidence 34568789999999888765
No 214
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=33.47 E-value=68 Score=20.98 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.++........+++.|+ ++||+|.+....
T Consensus 92 L~~~~~~~A~~L~~~Gv-~~Gd~V~l~~~~ 120 (580)
T 3etc_A 92 LKYYSDKAANFFVKHGI-GKGDYVMLTLKS 120 (580)
T ss_dssp HHHHHHHHHHHHHHTTC-CTTCEEEEECTT
T ss_pred HHHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 34556666677888884 899999988654
No 215
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=33.35 E-value=25 Score=17.02 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=13.1
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
+-+++||.++-+-|.+
T Consensus 42 agL~~GD~I~~Ing~~ 57 (88)
T 1kwa_A 42 GTLHVGDEIREINGIS 57 (88)
T ss_dssp TCCCTTCEEEEETTEE
T ss_pred CCCCCCCEEEEECCEE
Confidence 5579999999988764
No 216
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A
Probab=33.31 E-value=54 Score=16.96 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=15.9
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
+.+..+.+.+.+. +|+.|+++.|.
T Consensus 90 l~el~~~~~~~~~--kGe~vivv~~~ 113 (115)
T 3ffy_A 90 LSELIEHFTATDP--RGEIVIVLAGI 113 (115)
T ss_dssp HHHHHHHHHHSCC--CSSEEEEECCC
T ss_pred HHHHHHHHHhcCC--CCCEEEEEeCC
Confidence 3444555556654 89999998774
No 217
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=33.16 E-value=59 Score=20.83 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+-..++.|++.|+. .+.+||..+..
T Consensus 232 ~D~~vG~ll~~L~~~g~~--dnTiviftSDh 260 (492)
T 1fsu_A 232 MDEAVGNVTAALKSSGLW--NNTVFIFSTDN 260 (492)
T ss_dssp HHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCc--cCEEEEEECCC
Confidence 466688888999999984 57777776654
No 218
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=33.09 E-value=23 Score=19.36 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=16.1
Q ss_pred HHhCCCCCCCCeEEEeecccC
Q psy255 40 GRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~~ 60 (70)
+.+.|.+++||.|+-+-|.+.
T Consensus 143 A~~aG~L~~GD~Il~Vng~~v 163 (196)
T 3gsl_A 143 AHKDGRLQIGDKILAVNSVGL 163 (196)
T ss_dssp HHHHCCCCTTCEEEEETTEEC
T ss_pred HHhcCCCCCCCEEEEECCCcC
Confidence 344687899999999888753
No 219
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=33.09 E-value=40 Score=17.27 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCC-CCCCeEEEe
Q psy255 31 TRVAHGIKYGRDRKFL-NQGDPVIVV 55 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~-~~GD~vv~~ 55 (70)
..+...++.+.++|++ .+||-+.+|
T Consensus 46 stvsrnl~~L~r~GlVe~~~~Dl~LT 71 (95)
T 1bja_A 46 AVVNSNIGVLIKKGLVEKSGDGLIIT 71 (95)
T ss_dssp HHHHHHHHHHHTTTSEEEETTEEEEC
T ss_pred HHHHHHHHHHHHCCCeecCCCCeeeC
Confidence 4577788999999999 557665554
No 220
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.04 E-value=22 Score=18.42 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=14.1
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 61 ~aG-L~~GD~I~~vng~~v 78 (128)
T 1uf1_A 61 GSG-LKVGDQILEVNGRSF 78 (128)
T ss_dssp HHT-CCTTCEEEEETTEEC
T ss_pred HCC-CCCCCEEEEECCEEC
Confidence 456 689999999888753
No 221
>3r8n_Q 30S ribosomal protein S17; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_Q 3fih_Q* 3iy8_Q 3j18_Q* 2wwl_Q 3oar_Q 3oaq_Q 3ofb_Q 3ofa_Q 3ofp_Q 3ofx_Q 3ofy_Q 3ofo_Q 3r8o_Q 4a2i_Q 4gd1_Q 4gd2_Q 3i1m_Q 1vs7_Q* 3e1a_J ...
Probab=32.91 E-value=25 Score=17.47 Aligned_cols=16 Identities=19% Similarity=0.021 Sum_probs=13.3
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
+-++.||.|.+..+.|
T Consensus 48 n~~~~GD~V~I~e~RP 63 (80)
T 3r8n_Q 48 NECGIGDVVEIRECRP 63 (80)
T ss_dssp GCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEecc
Confidence 4689999999988765
No 222
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=32.33 E-value=32 Score=21.99 Aligned_cols=24 Identities=8% Similarity=0.074 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
.+-.+++.+. .|-+++||++++++
T Consensus 375 si~~~L~~~~-~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 375 AVFDILRRAH-DAGQKTGSRAVLYA 398 (413)
T ss_dssp HHHHHHHHHH-HHCCCTTCEEEEEE
T ss_pred HHHHHHHHHH-hCCCCCCCEEEEEE
Confidence 3455666666 56689999988764
No 223
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=32.32 E-value=59 Score=20.30 Aligned_cols=27 Identities=15% Similarity=0.020 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.+........+.+.| + +||+|.+....
T Consensus 65 ~~~~~~lA~~L~~~g-~-~gd~V~i~~~n 91 (480)
T 3t5a_A 65 YRRTLNVAQELSRCG-S-TGDRVVISAPQ 91 (480)
T ss_dssp HHHHHHHHHHHTTSS-C-TTCEEEEECCS
T ss_pred HHHHHHHHHHHHhcC-C-CCCEEEEEcCC
Confidence 445555666778888 5 99999987653
No 224
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=31.72 E-value=62 Score=20.92 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+-..++.|++.|+. .+.+||..+..
T Consensus 289 ~~D~~iG~ll~~L~~~g~~--dnTiIiftSDh 318 (536)
T 1hdh_A 289 RMDWNIGRVVDYLRRQGEL--DNTFVLFMSDN 318 (536)
T ss_dssp HHHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHcCCc--CCeEEEEECcC
Confidence 3566788889999999985 56777777664
No 225
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=31.45 E-value=33 Score=20.03 Aligned_cols=19 Identities=26% Similarity=0.316 Sum_probs=14.6
Q ss_pred HHhCCCCCCCCeEEEeecc
Q psy255 40 GRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~ 58 (70)
.+-.+.+++||.|++....
T Consensus 14 ~~~~~~~~~gd~v~i~~~~ 32 (277)
T 1o54_A 14 GKVADTLKPGDRVLLSFED 32 (277)
T ss_dssp CCGGGCCCTTCEEEEEETT
T ss_pred ccccCCCCCCCEEEEEECC
Confidence 3456788999999998653
No 226
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=31.17 E-value=14 Score=18.50 Aligned_cols=18 Identities=22% Similarity=0.302 Sum_probs=14.2
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 62 ~~aG-l~~GD~I~~vng~~ 79 (104)
T 2z17_A 62 HCAG-LQAGDVLANINGVS 79 (104)
T ss_dssp HHHT-CCTTCBCCEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3467 79999999888764
No 227
>2akk_A RP4479, PHNA-like protein; beta-strand protein, structural genomics, PSI, protein struc initiative; NMR {Rhodopseudomonas palustris} SCOP: b.34.11.2
Probab=31.09 E-value=27 Score=17.27 Aligned_cols=16 Identities=31% Similarity=0.538 Sum_probs=12.5
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
..++.||.|+++-...
T Consensus 11 n~L~dGDsVtlIKDLk 26 (74)
T 2akk_A 11 ALLADGDNVSLIKDLK 26 (74)
T ss_dssp CBCCTTEEEEESSCEE
T ss_pred CCccCCCEEEEEeeee
Confidence 3688999999987654
No 228
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=31.05 E-value=58 Score=20.76 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+-..++.+++.|+. .+.+||..+..
T Consensus 276 ~~D~~iG~ll~~L~~~g~~--dnTlVIftSDH 305 (502)
T 3ed4_A 276 YLDAQVGKVLDKIKAMGEE--DNTIVIFTSDN 305 (502)
T ss_dssp HHHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHcCCc--CCeEEEEeCCC
Confidence 4577889999999999984 56777766654
No 229
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=30.80 E-value=68 Score=20.62 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+-..++.|++.|+. .+.+||..+..
T Consensus 236 ~D~~vG~ll~~L~~~gl~--dnTiViftSDh 264 (489)
T 1auk_A 236 LDAAVGTLMTAIGDLGLL--EETLVIFTADN 264 (489)
T ss_dssp HHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCc--CCeEEEEeCCC
Confidence 566788889999999984 56777766654
No 230
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=30.50 E-value=14 Score=19.34 Aligned_cols=18 Identities=28% Similarity=0.304 Sum_probs=14.7
Q ss_pred hCCCCCCCCeEEEeeccc
Q psy255 42 DRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~ 59 (70)
+.|.++.||.|+-+-|..
T Consensus 70 ~aG~L~~GD~Il~Vng~~ 87 (127)
T 1wg6_A 70 KDGRLRMNDQLIAVNGET 87 (127)
T ss_dssp HHHTSCSCCBEEEETTEE
T ss_pred HCCCCCCCCEEEEECCEE
Confidence 457789999999988864
No 231
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=30.42 E-value=17 Score=23.09 Aligned_cols=27 Identities=11% Similarity=-0.137 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 32 RVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 32 ~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
+++......+.-..+++||+|-+++-+
T Consensus 26 ~~~~~~~~~i~P~~Lk~GD~I~ivaPS 52 (371)
T 3tla_A 26 MLEMIQSHPLLAAPLAVGDTIGFFSSS 52 (371)
T ss_dssp --------CBCCCCCCTTCEEEEECSS
T ss_pred HHHHHHhccCCCCCCCCcCEEEEEeCC
Confidence 344444444555667888888888754
No 232
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=30.41 E-value=43 Score=16.01 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=13.0
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.-.+++||+|-++.-..
T Consensus 47 ~~~L~dGD~veIv~~Vg 63 (73)
T 2kl0_A 47 ETPVTAGDEIEILTPRQ 63 (73)
T ss_dssp TCBCCTTCEEEEECCCC
T ss_pred cccCCCCCEEEEEcccc
Confidence 34688999999987653
No 233
>2ki8_A Tungsten formylmethanofuran dehydrogenase, subunit D (FWDD-2); beta-barrel, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=30.02 E-value=38 Score=18.35 Aligned_cols=19 Identities=26% Similarity=0.230 Sum_probs=13.9
Q ss_pred HHHhCCCCCCCCeEEEeecc
Q psy255 39 YGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 39 ~~~~~g~~~~GD~vv~~~g~ 58 (70)
-+++.|+ +.||.|.+.+..
T Consensus 61 dA~~lGI-~dGd~V~V~s~~ 79 (146)
T 2ki8_A 61 DWNALGL-QEGDRVKVKTEF 79 (146)
T ss_dssp HHHHHTC-CTTCEEEEECSS
T ss_pred HHHHcCC-CCCCEEEEEeCC
Confidence 3556675 799999988754
No 234
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=30.02 E-value=35 Score=14.84 Aligned_cols=13 Identities=23% Similarity=0.412 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 20 ~~~Gd~i~v~~~~ 32 (58)
T 1zuy_A 20 LKKGDVIYITREE 32 (58)
T ss_dssp BCTTCEEEEEEEC
T ss_pred CCCCCEEEEEEec
Confidence 5899999998753
No 235
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=29.90 E-value=32 Score=16.27 Aligned_cols=15 Identities=7% Similarity=0.184 Sum_probs=12.3
Q ss_pred HHHHHHHHhCCCCCC
Q psy255 34 AHGIKYGRDRKFLNQ 48 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~ 48 (70)
.+..++++++||+-+
T Consensus 32 ~eV~~YC~~kGwIiP 46 (60)
T 1ng7_A 32 QEVRDYCEKKGWIVN 46 (60)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHCCceec
Confidence 456789999999876
No 236
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=29.85 E-value=37 Score=18.37 Aligned_cols=18 Identities=28% Similarity=0.267 Sum_probs=14.4
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 42 ~aG-l~~GD~I~~ing~~v 59 (166)
T 1w9e_A 42 LVG-LRFGDQVLQINGENC 59 (166)
T ss_dssp HTT-CCTTCEEEEETTEEC
T ss_pred HcC-CCCCCEEEEECCEEC
Confidence 457 799999999988753
No 237
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=29.77 E-value=37 Score=15.90 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=25.1
Q ss_pred ChhHHhhhcccc--eeeecCCCCCCHHHHHHHHHHHHHhCCCC
Q psy255 6 SEEIPKQVLIGK--IEPSPADWLRDVDTRVAHGIKYGRDRKFL 46 (70)
Q Consensus 6 ~~~~~r~l~l~~--v~~~~~~~~~~~~~~~~~a~~~~~~~g~~ 46 (70)
-.++++.+.++. |.-+......-.++..+...+.+.+.|+.
T Consensus 12 ~~diA~~aGVS~sTVSr~ln~~~~vs~~t~~rV~~~a~~lgY~ 54 (67)
T 2l8n_A 12 MKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYL 54 (67)
T ss_dssp HHHHHHHTTCCHHHHHHTTTCCCCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHhCCC
Confidence 356778777777 55444333222355666677777888874
No 238
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=29.74 E-value=47 Score=19.64 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeec
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
..|...+.+.+ +++||+|+++.+
T Consensus 112 ~ta~~~l~~~~-~~~g~~vlV~Ga 134 (302)
T 1iz0_A 112 LTAYLALKRAQ-ARPGEKVLVQAA 134 (302)
T ss_dssp HHHHHHHHHTT-CCTTCEEEESST
T ss_pred HHHHHHHHHhc-CCCCCEEEEECC
Confidence 34455566678 999999998875
No 239
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=29.07 E-value=38 Score=14.58 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=10.4
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 19 ~~~Gd~i~v~~~~ 31 (54)
T 2a28_A 19 IDPGDIITVIRGD 31 (54)
T ss_dssp BCTTCEEEEEECC
T ss_pred CCCCCEEEEEEec
Confidence 5899999888754
No 240
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=28.62 E-value=86 Score=20.30 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+-..++.|++.|+. .+.+||..+..
T Consensus 325 ~~D~~iG~ll~~L~~~gl~--dnTiIiftSDH 354 (543)
T 2vqr_A 325 EVDDCLGRVFSYLDETGQW--DDTLIIFTSDH 354 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCG--GGEEEEEEESC
T ss_pred HHHHHHHHHHHHHHhcCCc--CCeEEEEECcC
Confidence 3567788889999999984 56777776664
No 241
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=28.56 E-value=60 Score=16.93 Aligned_cols=26 Identities=8% Similarity=0.061 Sum_probs=17.5
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHhCCC
Q psy255 18 IEPSPADWLRDVDTRVAHGIKYGRDRKF 45 (70)
Q Consensus 18 v~~~~~~~~~~~~~~~~~a~~~~~~~g~ 45 (70)
+.|+-. ..+....++.+++.+++.|+
T Consensus 22 v~Plg~--~~svs~~Va~~i~vi~~sGL 47 (106)
T 1vk8_A 22 VVPAVE--DGRLHEVIDRAIEKISSWGM 47 (106)
T ss_dssp EEESSC--GGGHHHHHHHHHHHHHTTCS
T ss_pred EEeCCC--CCchHHHHHHHHHHHHHcCC
Confidence 555532 24667778888888887775
No 242
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=28.43 E-value=45 Score=16.56 Aligned_cols=20 Identities=25% Similarity=0.197 Sum_probs=15.0
Q ss_pred HhCCCCCCCCeEEEeecccC
Q psy255 41 RDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~~ 60 (70)
.+.|-+++||.|+-+-|.+.
T Consensus 55 ~~aggL~~GD~Il~vng~~v 74 (107)
T 1uhp_A 55 AKEGGLQIHDRIIEVNGRDL 74 (107)
T ss_dssp HHTTCCCSSCEEEEETTEEC
T ss_pred HHcCCCCCCCEEEEECCEEC
Confidence 34545799999999888753
No 243
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=28.22 E-value=54 Score=19.67 Aligned_cols=25 Identities=12% Similarity=-0.011 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
...|...+.+.+-+++||.|+++.+
T Consensus 134 ~~tA~~al~~~~~~~~g~~vlI~Ga 158 (336)
T 4b7c_A 134 GMTAYFALLDVGQPKNGETVVISGA 158 (336)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEESST
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECC
Confidence 3556666768888999999998876
No 244
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=28.05 E-value=63 Score=20.34 Aligned_cols=29 Identities=10% Similarity=0.188 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+...++.+++.|+. .+.+|++.+.+
T Consensus 278 ~D~~ig~~l~~L~~~g~~--~nTlvI~tsDH 306 (450)
T 3lxq_A 278 SDYALGTFFDKAKKSSYW--DDTIFIVIADH 306 (450)
T ss_dssp HHHHHHHHHHHHTTSSSG--GGEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCc--CCeEEEEECCC
Confidence 467788888899999974 45677666664
No 245
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=27.98 E-value=49 Score=17.25 Aligned_cols=12 Identities=42% Similarity=0.678 Sum_probs=7.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|++++-
T Consensus 87 L~dgD~V~fist 98 (110)
T 2k9x_A 87 LNDGDTVEFIST 98 (110)
T ss_dssp CCSSCEEEEEEC
T ss_pred CCCcCEEEEeCC
Confidence 566666666543
No 246
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=27.92 E-value=58 Score=19.52 Aligned_cols=24 Identities=8% Similarity=-0.009 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeec
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
-.+++.+.+.|-+++||++++.+-
T Consensus 296 ~~~L~~~~~~~~~~~g~~~l~~~~ 319 (335)
T 1u6e_A 296 PLAMAELLTTGAAKPGDLALLIGY 319 (335)
T ss_dssp HHHHHHHHHHTSSCTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCCCCCEEEEEEE
Confidence 356777777788899999887754
No 247
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=27.88 E-value=38 Score=15.05 Aligned_cols=12 Identities=25% Similarity=0.684 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 24 ~~~Gd~i~v~~~ 35 (62)
T 1k4u_S 24 FQEGDIILVLSK 35 (62)
T ss_dssp BCSSCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999875
No 248
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=27.78 E-value=39 Score=15.41 Aligned_cols=12 Identities=42% Similarity=0.540 Sum_probs=10.4
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 29 f~~Gd~i~v~~~ 40 (70)
T 1gcq_C 29 LNPGDIVELTKA 40 (70)
T ss_dssp BCTTCEEEEEEC
T ss_pred cCCCCEEEEEeC
Confidence 689999999876
No 249
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=27.76 E-value=80 Score=20.65 Aligned_cols=29 Identities=17% Similarity=0.178 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
.|..+-..++.|++.|+. .+.+||..+..
T Consensus 294 ~D~~vG~il~~L~~~g~~--dnTiviftsDh 322 (562)
T 1p49_A 294 MDWSVGQILNLLDELRLA--NDTLIYFTSDQ 322 (562)
T ss_dssp HHHHHHHHHHHHHHTTCG--GGEEEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCc--cCeEEEEECCC
Confidence 567788889999999984 56777766654
No 250
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=27.68 E-value=41 Score=14.72 Aligned_cols=13 Identities=8% Similarity=0.174 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 20 ~~~Gd~i~v~~~~ 32 (58)
T 2bz8_A 20 ISVGEIITNIRKE 32 (58)
T ss_dssp BCTTCEEEEEECC
T ss_pred ECCCCEEEEEEeC
Confidence 5899999988753
No 251
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=27.33 E-value=34 Score=19.49 Aligned_cols=13 Identities=31% Similarity=0.698 Sum_probs=10.0
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
++++||+|++...
T Consensus 1 ~~~~Gd~v~~~~~ 13 (255)
T 3mb5_A 1 MIREGDKVVLVDP 13 (255)
T ss_dssp CCCTTCEEEEECT
T ss_pred CCCCCCEEEEEEC
Confidence 4789999888743
No 252
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.32 E-value=76 Score=20.33 Aligned_cols=30 Identities=13% Similarity=0.025 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+-..++.|++.|+. .+.+||..+..
T Consensus 256 ~~D~~vG~ll~~L~~~g~~--dnTiVIftSDH 285 (482)
T 3b5q_A 256 MVSKQVDSVLKALYSTPAG--RNTIVVIMADH 285 (482)
T ss_dssp HHHHHHHHHHHHHTTSTTG--GGEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHcCCc--CCeEEEEECCC
Confidence 3566788889999999984 56777766654
No 253
>1wj5_A Hypothetical protein (riken cDNA 0610009H20); winged helix, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.4.5.59
Probab=27.28 E-value=38 Score=18.25 Aligned_cols=19 Identities=0% Similarity=0.118 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~ 47 (70)
...++.+|+..|.++|++-
T Consensus 76 i~sifKeAi~~Lqe~G~Vf 94 (120)
T 1wj5_A 76 AQRVFKNALQLLQEKGLVF 94 (120)
T ss_dssp HHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHHHCCEEE
Confidence 4688999999999999764
No 254
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=27.26 E-value=41 Score=16.96 Aligned_cols=18 Identities=11% Similarity=0.373 Sum_probs=13.3
Q ss_pred HHHHhCCCCCCCCeEEEee
Q psy255 38 KYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 38 ~~~~~~g~~~~GD~vv~~~ 56 (70)
++++++++ +.||.++...
T Consensus 71 ~Fv~~~~L-~~GD~lvF~~ 88 (104)
T 1yel_A 71 NFVKDNNL-EDGKYLQFIY 88 (104)
T ss_dssp HHHHHHTC-CTTCEEEEEE
T ss_pred HHHHHcCC-CCCCEEEEEE
Confidence 45566775 8999999765
No 255
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=27.18 E-value=42 Score=14.51 Aligned_cols=14 Identities=29% Similarity=0.266 Sum_probs=10.8
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 4e6r_A 19 SLVXGSRVTVMEXC 32 (58)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred eEeCCCEEEEeEcC
Confidence 36899999988643
No 256
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=27.17 E-value=32 Score=16.38 Aligned_cols=16 Identities=25% Similarity=0.273 Sum_probs=12.9
Q ss_pred CCCCCCeEEEeecccC
Q psy255 45 FLNQGDPVIVVTGWKK 60 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~ 60 (70)
-+++||.|+-+-|.+.
T Consensus 42 Gl~~GD~I~~vng~~v 57 (88)
T 3bpu_A 42 GLKEGDLIVEVNKKNV 57 (88)
T ss_dssp TCCTTCEEEEETTEEC
T ss_pred CCCCCCEEEEECCEEc
Confidence 3689999999888753
No 257
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=27.11 E-value=38 Score=16.63 Aligned_cols=15 Identities=33% Similarity=0.583 Sum_probs=13.0
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
| +++||.|+-+-|.+
T Consensus 17 G-L~~GD~I~~InG~~ 31 (91)
T 2kjp_A 17 K-IEVGDKIISADGKN 31 (91)
T ss_dssp C-CCSSCEEEEETTBC
T ss_pred c-CCCCCEEEEECCEE
Confidence 6 79999999998875
No 258
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=27.10 E-value=42 Score=14.58 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 21 ~~~Gd~i~v~~~~ 33 (58)
T 1sem_A 21 FKRGDVITLINKD 33 (58)
T ss_dssp BCTTCEEEEEECS
T ss_pred CCCCCEEEEEEec
Confidence 6899999998753
No 259
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.09 E-value=16 Score=19.00 Aligned_cols=18 Identities=33% Similarity=0.411 Sum_probs=14.1
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.| +++||.|+-+-|.+
T Consensus 75 ~~aG-L~~GD~I~~ing~~ 92 (126)
T 2yuy_A 75 FEAG-LCTGDRIIKVNGES 92 (126)
T ss_dssp HHHT-CCSSCCCCEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3457 79999999888764
No 260
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=27.05 E-value=45 Score=20.88 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=15.1
Q ss_pred CCCCCeEEEeecccCCCCCC
Q psy255 46 LNQGDPVIVVTGWKKGAGFT 65 (70)
Q Consensus 46 ~~~GD~vv~~~g~~~~~g~t 65 (70)
++.=|.||+++|.+..+|.|
T Consensus 98 ~~~advVvi~aG~prkpGmt 117 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKAGME 117 (345)
T ss_dssp TTTCSEEEECCCCCCCTTCC
T ss_pred hCCCCEEEECCCCCCCCCCC
Confidence 45668889999988777654
No 261
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=27.04 E-value=42 Score=14.91 Aligned_cols=12 Identities=8% Similarity=0.465 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (62)
T 2iim_A 25 FEKGEQLRILEQ 36 (62)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 589999999875
No 262
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=27.03 E-value=42 Score=14.65 Aligned_cols=12 Identities=17% Similarity=0.243 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 19 ~~~Gd~i~v~~~ 30 (58)
T 1jo8_A 19 FVENDKIINIEF 30 (58)
T ss_dssp BCTTCEEEEEEC
T ss_pred cCCCCEEEEEEe
Confidence 589999998874
No 263
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=27.02 E-value=42 Score=14.71 Aligned_cols=12 Identities=25% Similarity=0.410 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 23 ~~~Gd~i~v~~~ 34 (59)
T 2g6f_X 23 FSKGDVIHVTRV 34 (59)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999998874
No 264
>2gdt_A Leader protein; P65 homolog; NSP1 (EC 3.4.22.-); beta-barrel, alpha-beta, replicase, structural genomics, PSI-2, protein structure initiative; NMR {Sars coronavirus} SCOP: d.346.1.1 PDB: 2hsx_A
Probab=26.67 E-value=58 Score=17.26 Aligned_cols=47 Identities=6% Similarity=0.055 Sum_probs=30.9
Q ss_pred hhcccc--eeee-cCCCCCCHHHHHHHHHHHHHhC--CCCC---------CCCeEEEeecc
Q psy255 12 QVLIGK--IEPS-PADWLRDVDTRVAHGIKYGRDR--KFLN---------QGDPVIVVTGW 58 (70)
Q Consensus 12 ~l~l~~--v~~~-~~~~~~~~~~~~~~a~~~~~~~--g~~~---------~GD~vv~~~g~ 58 (70)
|+++-| +... ...|....|+.+++|-..+++- ++++ .+|.|+++.+.
T Consensus 4 ~~~~p~l~~~~~~V~gw~~~~EeALe~ar~~L~~g~~~lV~~~Kg~~p~l~~p~V~v~rs~ 64 (116)
T 2gdt_A 4 QLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGVLPQLEQPYVFIKRSD 64 (116)
T ss_dssp EEEEEECCTTTCSCCCSCSSHHHHHHHHHHHHHHTCEEEECCCTTSGGGSCSCEEEEECCS
T ss_pred EEeeeEEEEcceeccCCCCCHHHHHHHHHHHhhcCCceEEEeccccCcccCCCEEEEEecc
Confidence 466777 3222 2357778899999998888864 3333 35777777654
No 265
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=26.66 E-value=43 Score=14.56 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=9.9
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 20 ~~~Gd~i~v~~~ 31 (59)
T 1yn8_A 20 LAEGDIVFISYK 31 (59)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEc
Confidence 689999998764
No 266
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=26.58 E-value=40 Score=16.66 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=12.1
Q ss_pred CCCCCeEEEeeccc
Q psy255 46 LNQGDPVIVVTGWK 59 (70)
Q Consensus 46 ~~~GD~vv~~~g~~ 59 (70)
+++||.|+-+-|.+
T Consensus 24 L~~GD~I~~Ing~~ 37 (100)
T 3i18_A 24 LHAGDLITEIDGNA 37 (100)
T ss_dssp CCTTCEEEEETTBC
T ss_pred CCCCCEEEEECCEE
Confidence 68999999988875
No 267
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=26.49 E-value=44 Score=14.76 Aligned_cols=12 Identities=8% Similarity=0.418 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (60)
T 2gnc_A 25 FKKGASLLLYHR 36 (60)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999998875
No 268
>2rcf_A Unidentified carboxysome polypeptide; cyclic pentamer, structural protein; 2.15A {Halothiobacillus neapolitanus} SCOP: b.40.15.1
Probab=26.49 E-value=45 Score=17.00 Aligned_cols=14 Identities=29% Similarity=0.169 Sum_probs=11.8
Q ss_pred CCCCCeEEEeeccc
Q psy255 46 LNQGDPVIVVTGWK 59 (70)
Q Consensus 46 ~~~GD~vv~~~g~~ 59 (70)
+..||.|++++|+.
T Consensus 44 AG~Ge~Vlv~~GSa 57 (91)
T 2rcf_A 44 CIPGDWVLCVGSSA 57 (91)
T ss_dssp CCTTCEEEEEETTH
T ss_pred CCCCCEEEEeCCHH
Confidence 56899999999874
No 269
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.46 E-value=40 Score=16.48 Aligned_cols=17 Identities=18% Similarity=0.179 Sum_probs=13.5
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
+-+++||.|+-+-|.+.
T Consensus 46 agL~~GD~Il~ing~~v 62 (96)
T 2edv_A 46 GKLFPGDQILQMNNEPA 62 (96)
T ss_dssp TTSCTTCBEEEESSCBS
T ss_pred hCCCCCCEEEEECCEEC
Confidence 44689999999988753
No 270
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=26.44 E-value=49 Score=18.63 Aligned_cols=14 Identities=29% Similarity=0.202 Sum_probs=12.4
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-++++|+|++.+-+
T Consensus 74 ~i~~~D~vii~S~S 87 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD 87 (170)
T ss_dssp CCCTTCEEEEEESC
T ss_pred CCCCCCEEEEEeCC
Confidence 68999999999876
No 271
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=26.36 E-value=35 Score=18.95 Aligned_cols=16 Identities=25% Similarity=0.493 Sum_probs=12.8
Q ss_pred HhCCCCCCCCeEEEee
Q psy255 41 RDRKFLNQGDPVIVVT 56 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~ 56 (70)
+..=|+.+||.|++--
T Consensus 65 Rk~IwI~~GD~VlVe~ 80 (143)
T 1d7q_A 65 RKKVWINTSDIILVGL 80 (143)
T ss_dssp GGSCCCCTTCEEEEEC
T ss_pred eeeEEecCCCEEEEee
Confidence 4577999999988854
No 272
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.33 E-value=45 Score=16.92 Aligned_cols=17 Identities=35% Similarity=0.630 Sum_probs=13.8
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
|-+++||.|+-+-|.+.
T Consensus 59 gGL~~GD~Il~ing~~v 75 (119)
T 2cs5_A 59 PRLNEGDQVVLINGRDI 75 (119)
T ss_dssp SCCCTTCEEEEETTBCT
T ss_pred cCCCCCCEEEEECCEEC
Confidence 45799999999988753
No 273
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=26.07 E-value=34 Score=21.13 Aligned_cols=14 Identities=29% Similarity=0.420 Sum_probs=11.9
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
.+++||+|-+++-+
T Consensus 8 ~L~~GD~I~ivaPS 21 (327)
T 4h1h_A 8 KLKQGDEIRIIAPS 21 (327)
T ss_dssp CCCTTCEEEEECSS
T ss_pred CCCCCCEEEEEeCC
Confidence 57999999999765
No 274
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=26.05 E-value=49 Score=21.23 Aligned_cols=27 Identities=15% Similarity=0.054 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEE
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVI 53 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv 53 (70)
.+.+++++.+++.+.+.+.++++|.++
T Consensus 361 ~~d~~l~~~a~~~L~~~~~~~~~~~~~ 387 (484)
T 4dsg_A 361 VNHSTLIEDCIVGCLASNLLLPEDLLV 387 (484)
T ss_dssp CCTTSHHHHHHHHHHHTTSCCTTCCEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCccceEE
Confidence 466889999999999999998888654
No 275
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=26.00 E-value=46 Score=14.50 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 20 ~~~Gd~i~v~~~ 31 (58)
T 1uti_A 20 FRSGEVVEVLDS 31 (58)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEE
Confidence 589999999875
No 276
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=25.95 E-value=45 Score=14.55 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 21 ~~~Gd~i~v~~~ 32 (60)
T 2v1q_A 21 IKSGDKVYILDD 32 (60)
T ss_dssp BCTTCEEEEEES
T ss_pred CCCCCEEEEEeC
Confidence 589999999875
No 277
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=25.95 E-value=45 Score=14.83 Aligned_cols=12 Identities=17% Similarity=0.523 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 24 ~~~Gd~i~v~~~ 35 (62)
T 1uj0_A 24 FKHGELITVLDD 35 (62)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 589999999874
No 278
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=25.83 E-value=46 Score=14.42 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=10.4
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 20 ~~~Gd~i~v~~~~ 32 (57)
T 1cka_A 20 FKKGDILRIRDKP 32 (57)
T ss_dssp BCTTCEEEEEECS
T ss_pred CCCCCEEEEEEec
Confidence 5899999998753
No 279
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=25.82 E-value=46 Score=14.71 Aligned_cols=12 Identities=8% Similarity=0.077 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 ~~~Gd~i~v~~~ 33 (61)
T 1y0m_A 22 FTKSAIIQNVEK 33 (61)
T ss_dssp BCTTCEEEEEEC
T ss_pred CcCCCEEEEEEe
Confidence 589999998875
No 280
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=25.75 E-value=48 Score=17.37 Aligned_cols=16 Identities=19% Similarity=0.244 Sum_probs=13.2
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
+.++.||.|.+..+-|
T Consensus 49 n~~k~GD~V~I~E~RP 64 (105)
T 2vqe_Q 49 EKYKLGDVVEIIESRP 64 (105)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccc
Confidence 4589999999988765
No 281
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=25.63 E-value=34 Score=17.08 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=13.5
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.| +++||.|+-+-|.+.
T Consensus 53 aG-l~~GDvI~~ing~~v 69 (105)
T 2i4s_A 53 IG-LQDGDMAVALNGLDL 69 (105)
T ss_dssp HT-CCTTCEEEEETTEET
T ss_pred cC-CCCCCEEEEECCEEC
Confidence 35 589999999988753
No 282
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=25.58 E-value=1.1e+02 Score=19.41 Aligned_cols=28 Identities=21% Similarity=0.087 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 35 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 62 (503)
T 4fuq_A 35 VARAGRVANVLVARGL-QVGDRVAAQTEK 62 (503)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEECCC
Confidence 3445555566788885 899999987643
No 283
>2kaf_A Non-structural protein 3; SARS-unique domain-C, automation in structure determination, viral protein; NMR {Sars coronavirus}
Probab=25.54 E-value=15 Score=17.27 Aligned_cols=11 Identities=36% Similarity=0.821 Sum_probs=8.6
Q ss_pred CCCCCCeEEEe
Q psy255 45 FLNQGDPVIVV 55 (70)
Q Consensus 45 ~~~~GD~vv~~ 55 (70)
+++.||++|.-
T Consensus 32 flkRGdkivyh 42 (67)
T 2kaf_A 32 FLKRGDKIVYH 42 (67)
T ss_dssp EEEETTEEEEE
T ss_pred hhhcCCeeeee
Confidence 56889999864
No 284
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=25.52 E-value=46 Score=14.78 Aligned_cols=13 Identities=15% Similarity=0.412 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 20 ~~~Gd~i~v~~~~ 32 (65)
T 2oaw_A 20 MKKGDILTLLNST 32 (65)
T ss_dssp BCTTCEEEEEECC
T ss_pred CCCCCEEEEEEcC
Confidence 5899999998753
No 285
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=25.52 E-value=98 Score=19.91 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 62 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n 89 (544)
T 3o83_A 62 DRLSTNLATRLAEKGL-GKGDTALVQLPN 89 (544)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEECCCS
T ss_pred HHHHHHHHHHHHHCCC-CCCCEEEEECCC
Confidence 4445555567788885 899999987643
No 286
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=25.50 E-value=47 Score=14.49 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 ~~~Gd~i~v~~~ 33 (58)
T 1zlm_A 22 FEEGDIIYITDM 33 (58)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 589999999874
No 287
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=25.49 E-value=40 Score=18.71 Aligned_cols=20 Identities=20% Similarity=0.036 Sum_probs=15.6
Q ss_pred HHhCCCCCCCCeEEEeeccc
Q psy255 40 GRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 40 ~~~~g~~~~GD~vv~~~g~~ 59 (70)
+-+.|-++.||.|+-+-|..
T Consensus 58 A~~aG~L~~GD~Il~vng~~ 77 (206)
T 3r0h_A 58 VAADKRLKIFDHICDINGTP 77 (206)
T ss_dssp HHHHCCCCTTCEEEEETTEE
T ss_pred HHhcCCCCCCCEEEEECCEE
Confidence 44567689999999987764
No 288
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=25.49 E-value=1.1e+02 Score=19.81 Aligned_cols=28 Identities=14% Similarity=-0.096 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++.....-..+.+.|+ ++||+|.+....
T Consensus 107 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n 134 (570)
T 4gr5_A 107 NERANRLAHRLVGLGV-APGTLVGVHLER 134 (570)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEeCC
Confidence 4455555567788885 899999987653
No 289
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=25.47 E-value=46 Score=14.82 Aligned_cols=12 Identities=8% Similarity=0.470 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (64)
T 2jte_A 25 FREGEIIHLISK 36 (64)
T ss_dssp BCTTCEEEEEES
T ss_pred CCCCCEEEEEEC
Confidence 589999999864
No 290
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=25.39 E-value=46 Score=15.09 Aligned_cols=12 Identities=42% Similarity=0.365 Sum_probs=9.9
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 f~~Gd~i~v~~~ 33 (67)
T 2bzy_A 22 LEVGDIVKVTRM 33 (67)
T ss_dssp BCTTCEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 589999998864
No 291
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=25.38 E-value=47 Score=15.39 Aligned_cols=12 Identities=42% Similarity=0.482 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (65)
T 2lj0_A 25 LRDGDIVDVMEK 36 (65)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEeEe
Confidence 689999998864
No 292
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=25.27 E-value=43 Score=17.27 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.7
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.|-+++||.|+-+-|.+
T Consensus 69 aggL~~GD~Il~VnG~~ 85 (120)
T 2iwo_A 69 TQKLRVGDRIVTICGTS 85 (120)
T ss_dssp HTCCCTTCEEEEETTEE
T ss_pred hCCCCCCCEEEEECCEE
Confidence 35579999999988865
No 293
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=25.10 E-value=47 Score=14.91 Aligned_cols=12 Identities=33% Similarity=0.407 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (65)
T 2j05_A 25 FLKGDMFIVHNE 36 (65)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEeEe
Confidence 589999998874
No 294
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=25.06 E-value=56 Score=17.65 Aligned_cols=16 Identities=19% Similarity=0.241 Sum_probs=13.3
Q ss_pred CCCCCCCCeEEEeecc
Q psy255 43 RKFLNQGDPVIVVTGW 58 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~ 58 (70)
...+.++|.+|+++..
T Consensus 91 ~~~~~~~d~vI~iS~s 106 (183)
T 2xhz_A 91 LGMVTPQDVVIAISNS 106 (183)
T ss_dssp STTCCTTCEEEEECSS
T ss_pred hccCCCCCEEEEEeCC
Confidence 4668899999999876
No 295
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=25.06 E-value=49 Score=20.72 Aligned_cols=24 Identities=17% Similarity=0.116 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++.+.+.+.+ +++.|..||+++|.
T Consensus 33 v~~~a~~i~~--~~~~g~~vvi~hGn 56 (317)
T 3kzf_A 33 VEIAASEIYK--IHKAGYKVVLTSGN 56 (317)
T ss_dssp HHHHHHHHHH--HHHTTCEEEEECCC
T ss_pred HHHHHHHHHH--HHHCCCEEEEEECC
Confidence 3444444444 67889999999997
No 296
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=25.05 E-value=49 Score=14.36 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=10.3
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 22 ~~~Gd~i~v~~~~ 34 (58)
T 2drm_A 22 FKEGDTIIVHQKD 34 (58)
T ss_dssp BCTTCEEEEEECC
T ss_pred CCCCCEEEEEEec
Confidence 6899999988653
No 297
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=25.00 E-value=48 Score=14.53 Aligned_cols=13 Identities=15% Similarity=0.421 Sum_probs=10.6
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 22 ~~~Gd~i~v~~~~ 34 (60)
T 1oot_A 22 FRKGDVITILKKS 34 (60)
T ss_dssp BCTTCEEEEEECC
T ss_pred EcCCCEEEEEEeC
Confidence 5899999998753
No 298
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=24.98 E-value=1.1e+02 Score=19.82 Aligned_cols=29 Identities=10% Similarity=0.197 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
..+.+..+...+...+++++||.|++..-
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p 201 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEP 201 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESS
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCC
Confidence 44556666666667788999999887653
No 299
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=24.95 E-value=1.2e+02 Score=19.38 Aligned_cols=28 Identities=11% Similarity=0.015 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+++.| +++||+|.+....
T Consensus 55 ~~~~~~lA~~L~~~G-v~~gd~V~i~~~n 82 (529)
T 2v7b_A 55 EERARRFASALRTLG-VHPEERILLVMLD 82 (529)
T ss_dssp HHHHHHHHHHHHHTT-CCTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcC-CCCCCEEEEEcCC
Confidence 344555556677888 4899999988654
No 300
>4fib_A Uncharacterized protein YDHK; structural genomics, PSI-biology, northeast structural genom consortium, NESG, SR518A, DUF1541, PF07563; 2.00A {Bacillus subtilis subsp} PDB: 2ky9_A
Probab=24.95 E-value=63 Score=17.64 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=14.8
Q ss_pred CCCCCeEEEeecccCC-CCCCc
Q psy255 46 LNQGDPVIVVTGWKKG-AGFTN 66 (70)
Q Consensus 46 ~~~GD~vv~~~g~~~~-~g~tn 66 (70)
++.||.|++.+.-..+ .|.+-
T Consensus 1 ~~vGs~v~l~adHM~GM~gA~a 22 (129)
T 4fib_A 1 MKVGSQVIINTSHMKGMKGAEA 22 (129)
T ss_dssp CCTTCEEEECCCSSTTCTTCEE
T ss_pred CCCCCEEEEecccCCcCCCCeE
Confidence 4679999999887555 55443
No 301
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=24.91 E-value=1.2e+02 Score=19.25 Aligned_cols=28 Identities=21% Similarity=0.047 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.| +++||+|.+....
T Consensus 36 ~~~~~~~A~~L~~~G-v~~gd~V~i~~~~ 63 (504)
T 1t5h_X 36 RARVEAVAARLHADG-LRPQQRVAVVAPN 63 (504)
T ss_dssp HHHHHHHHHHHHHTT-CCTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcC-CCCCCEEEEEcCC
Confidence 344555556677888 4899999987653
No 302
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=24.90 E-value=37 Score=15.39 Aligned_cols=12 Identities=17% Similarity=0.501 Sum_probs=9.7
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 27 f~~Gd~i~v~~~ 38 (67)
T 3rnj_A 27 FKEGDLITLLVP 38 (67)
T ss_dssp BCTTCEEEECSS
T ss_pred CCCCCEEEEeec
Confidence 689999998853
No 303
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=24.81 E-value=72 Score=17.40 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhCCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLNQ 48 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~ 48 (70)
.++.++.+++.+++.|++.+
T Consensus 45 ~~~~i~~vl~~l~~~g~ldD 64 (159)
T 3c1d_A 45 TAEDYERVIAWCHEHGYLDD 64 (159)
T ss_dssp CHHHHHHHHHHHHHTTSCCH
T ss_pred CHHHHHHHHHHHHHcCCcCH
Confidence 46789999999999999853
No 304
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=24.77 E-value=1.3e+02 Score=19.40 Aligned_cols=28 Identities=18% Similarity=-0.050 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.+........+.+.|+ ++||+|.+....
T Consensus 54 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n 81 (541)
T 1v25_A 54 YQRARRLMGGLRALGV-GVGDRVATLGFN 81 (541)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 3445555566778885 899999987653
No 305
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=24.73 E-value=16 Score=17.68 Aligned_cols=11 Identities=27% Similarity=0.087 Sum_probs=0.0
Q ss_pred CCCCCCCeEEE
Q psy255 44 KFLNQGDPVIV 54 (70)
Q Consensus 44 g~~~~GD~vv~ 54 (70)
|-++.||.||-
T Consensus 1 ~~l~~GD~VVh 11 (71)
T 3mlq_E 1 GPHMPGDYLIH 11 (71)
T ss_dssp -----------
T ss_pred CcCCCCCEEEE
Confidence 34678888874
No 306
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=24.73 E-value=50 Score=14.40 Aligned_cols=12 Identities=33% Similarity=0.534 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 21 ~~~Gd~i~v~~~ 32 (58)
T 1zx6_A 21 LKPGDKVQLLEK 32 (58)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999865
No 307
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=24.69 E-value=88 Score=19.65 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEEEe
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVIVV 55 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv~~ 55 (70)
.+.|++++.+++.+++.+.+.+.|.++-.
T Consensus 385 ~~de~l~~~~~~~L~~~~~i~~~~~i~~~ 413 (513)
T 4gde_A 385 VNQETILADCIQGLVNTEMLKPTDEIVST 413 (513)
T ss_dssp CCTTTHHHHHHHHHHHTTSSCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhcCCCCccceEEE
Confidence 46678999999999999999999987643
No 308
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=24.63 E-value=49 Score=14.68 Aligned_cols=12 Identities=17% Similarity=0.257 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 20 ~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 20 IRVGEIIRNVKK 31 (62)
T ss_dssp BCTTCEEEEEEE
T ss_pred CcCCCEEEEEEe
Confidence 589999998875
No 309
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=24.62 E-value=47 Score=15.54 Aligned_cols=12 Identities=42% Similarity=0.540 Sum_probs=10.4
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 37 f~~Gd~i~v~~~ 48 (78)
T 1k1z_A 37 LNPGDIVELTKA 48 (78)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 689999999876
No 310
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=24.59 E-value=50 Score=14.31 Aligned_cols=12 Identities=25% Similarity=0.490 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 21 ~~~Gd~i~v~~~ 32 (58)
T 2vwf_A 21 FRRGDFIHVMDN 32 (58)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 579999999875
No 311
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=24.58 E-value=1.2e+02 Score=19.38 Aligned_cols=28 Identities=21% Similarity=0.279 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 56 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 83 (576)
T 3gqw_A 56 KARAEAGAKRLLSLNL-KKGDRVALIAET 83 (576)
T ss_dssp HHHHHHHHHHHHHTCC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 3445555566778885 899999987653
No 312
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=24.53 E-value=49 Score=15.05 Aligned_cols=12 Identities=33% Similarity=0.501 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 20 ~~~Gd~i~v~~~ 31 (65)
T 2nwm_A 20 LQKGDIVYIHKE 31 (65)
T ss_dssp BCTTCEEEEEEC
T ss_pred CcCCCEEEEEEe
Confidence 689999999864
No 313
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=24.53 E-value=73 Score=19.63 Aligned_cols=21 Identities=14% Similarity=0.045 Sum_probs=14.2
Q ss_pred HHHHHHHhCCCCCCCCeEEEeec
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
+|+..+.. ++++||.|++...
T Consensus 81 ~a~~~al~--~~~~gd~Vi~~~~ 101 (393)
T 1n8p_A 81 ATTATILQ--SLPQGSHAVSIGD 101 (393)
T ss_dssp HHHHHHHH--TSCSSCEEEEESS
T ss_pred HHHHHHHH--HcCCCCEEEEeCC
Confidence 34555555 5789999888763
No 314
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=24.53 E-value=94 Score=17.53 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEE
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVI 53 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv 53 (70)
+..+.+...++..+-.|-+++||++-
T Consensus 16 ~~~~~v~~~l~~~I~~g~l~pG~~L~ 41 (222)
T 3ihu_A 16 SASDTVFFGIMSGLELGTFVPGQRLV 41 (222)
T ss_dssp CHHHHHHHHHHHHHHHTSSCTTCEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCccC
Confidence 34455566666666667777777653
No 315
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=24.51 E-value=49 Score=14.74 Aligned_cols=12 Identities=17% Similarity=0.468 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (65)
T 1w1f_A 26 FKKGEKMKVLEE 37 (65)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEc
Confidence 689999998864
No 316
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=24.49 E-value=55 Score=19.92 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=17.6
Q ss_pred HHHHHHHhCCCCCCCCeEEEeecc
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.|...+.+.+-+++||.|+++.|.
T Consensus 154 ta~~~l~~~~~~~~g~~VlV~Gg~ 177 (353)
T 4dup_A 154 TVWANLFQMAGLTEGESVLIHGGT 177 (353)
T ss_dssp HHHHHHTTTTCCCTTCEEEESSTT
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCC
Confidence 344455677888999999998653
No 317
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=24.48 E-value=65 Score=20.43 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
+.+.+.++-+..-+++||. +.+|.+.+
T Consensus 262 ~~~lIa~lS~~~tL~pGDv--I~TGTpsG 288 (359)
T 3lzk_A 262 FPQLIVHAARTRPLSAGTI--IGSGTVSN 288 (359)
T ss_dssp HHHHHHHHTTTSCBCTTEE--EECCSCCC
T ss_pred HHHHHHHHhCCCCcCCCCE--EEcCCcCC
Confidence 3445556667789999995 45677654
No 318
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=24.46 E-value=30 Score=18.83 Aligned_cols=18 Identities=44% Similarity=0.455 Sum_probs=14.2
Q ss_pred CCCCCCCeEEEeecccCC
Q psy255 44 KFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~~ 61 (70)
-.++.||.|-++.|...+
T Consensus 90 ~~~~~Gd~VrI~~Gpf~g 107 (152)
T 3p8b_B 90 SGLEPGDLVEVIAGPFKG 107 (152)
T ss_dssp TTCCTTCEEEECSSTTTT
T ss_pred ccCCCCCEEEEeeecCCC
Confidence 356899999999997543
No 319
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=24.41 E-value=60 Score=17.64 Aligned_cols=15 Identities=40% Similarity=0.490 Sum_probs=12.6
Q ss_pred CCCCCCCeEEEeecc
Q psy255 44 KFLNQGDPVIVVTGW 58 (70)
Q Consensus 44 g~~~~GD~vv~~~g~ 58 (70)
..+.++|.+|+++.+
T Consensus 75 ~~~~~~d~vI~iS~s 89 (186)
T 1m3s_A 75 PPLAEGDLVIIGSGS 89 (186)
T ss_dssp CCCCTTCEEEEECSS
T ss_pred cCCCCCCEEEEEcCC
Confidence 567899999998876
No 320
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=24.37 E-value=1.2e+02 Score=19.46 Aligned_cols=26 Identities=23% Similarity=0.256 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
-|+.+..|++++++.+ |.+||++..+
T Consensus 245 fD~AV~~al~~~~~~~-----dTLIIVTADH 270 (400)
T 3a52_A 245 FANAIEVVEQYIRQHP-----DTLLVVTADH 270 (400)
T ss_dssp HHHHHHHHHHHHHHCC-----SEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCC-----CcEEEEeccC
Confidence 3566777777777653 5555555443
No 321
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=24.28 E-value=51 Score=14.61 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=9.8
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 ~~~Gd~i~v~~~ 33 (62)
T 2fpe_A 22 LEVDDPLLVELQ 33 (62)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999998764
No 322
>2gcx_A FEOA, ferrous iron transport protein A; NMR {Klebsiella pneumoniae} SCOP: b.34.1.2
Probab=24.28 E-value=65 Score=15.00 Aligned_cols=24 Identities=17% Similarity=-0.116 Sum_probs=18.7
Q ss_pred HHHHHHhCCCCCCCCeEEEeecccC
Q psy255 36 GIKYGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 36 a~~~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
..+++.+.|+. +|..|-++...|.
T Consensus 22 ~~~rL~~lGl~-pG~~v~v~~~~p~ 45 (75)
T 2gcx_A 22 YRQKLLSLGML-PGSSFHVVRVAPL 45 (75)
T ss_dssp HHHHHTTTTCC-SSEEEEECCCCSS
T ss_pred HHHHHHHCCCC-CCCEEEEEEeCCC
Confidence 46788899984 9999988876553
No 323
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=24.25 E-value=51 Score=14.48 Aligned_cols=13 Identities=15% Similarity=0.200 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 24 ~~~Gd~i~v~~~~ 36 (60)
T 2xmf_A 24 FNANDIIDIIKED 36 (60)
T ss_dssp BCTTCEEEEEEEC
T ss_pred CCCCCEEEEEEec
Confidence 5899999988753
No 324
>3e19_A FEOA; transcriptional regulator, metal-binding, iron uptake, beta- transcription regulator, metal binding protein; HET: GOL; 2.00A {Thermococcus thioreducens}
Probab=24.24 E-value=66 Score=15.09 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCCCCCCeEEEeecccC
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
...+++.+.|+ .+|..|-++...|.
T Consensus 26 ~~~~rL~~lGi-~~G~~v~v~~~~p~ 50 (77)
T 3e19_A 26 NARQKLVSMGL-TPGATIQVLESHPM 50 (77)
T ss_dssp HHHHHHHTTTC-STTCEEEEEEC--C
T ss_pred HHHHHHHHCCC-CCCCEEEEEEecCC
Confidence 46788999997 59999999987654
No 325
>2k5l_A FEOA; structure, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium thermocellum atcc 27405}
Probab=24.23 E-value=69 Score=15.31 Aligned_cols=24 Identities=8% Similarity=-0.136 Sum_probs=19.0
Q ss_pred HHHHHHhCCCCCCCCeEEEeecccC
Q psy255 36 GIKYGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 36 a~~~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
..+++.+.|+ .+|..|-++...|.
T Consensus 24 ~~~rL~~lGl-~pG~~v~V~~~~p~ 47 (81)
T 2k5l_A 24 LKRRIMDMGI-TRGCEIYIRKVAPL 47 (81)
T ss_dssp HHHHHHHHTC-CTTCEEEEEEECTT
T ss_pred HHHHHHHCCC-CCCCEEEEEEeCCC
Confidence 4678888997 49999998887654
No 326
>1hw1_A FADR, fatty acid metabolism regulator protein; helix-turn-helix, helix bundle, transcription; 1.50A {Escherichia coli} SCOP: a.4.5.6 a.78.1.1 PDB: 1hw2_A 1e2x_A 1h9g_A* 1h9t_A
Probab=24.16 E-value=1.1e+02 Score=17.41 Aligned_cols=15 Identities=7% Similarity=0.051 Sum_probs=10.4
Q ss_pred HHHHHHHHHhCCCCC
Q psy255 33 VAHGIKYGRDRKFLN 47 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~ 47 (70)
+++|++.|...|++.
T Consensus 48 VReAL~~L~~eGlv~ 62 (239)
T 1hw1_A 48 LREVLQRLARDGWLT 62 (239)
T ss_dssp HHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHCCcEE
Confidence 667777777777654
No 327
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=24.13 E-value=62 Score=14.70 Aligned_cols=13 Identities=46% Similarity=0.376 Sum_probs=9.7
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
.+++||.|-++.-
T Consensus 48 ~L~dgD~v~i~~~ 60 (64)
T 2cu3_A 48 PLRDGDVVEVVAL 60 (64)
T ss_dssp CCCTTCEEEEEEC
T ss_pred CCCCCCEEEEEee
Confidence 4788888887754
No 328
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=24.13 E-value=71 Score=18.33 Aligned_cols=15 Identities=7% Similarity=0.295 Sum_probs=12.5
Q ss_pred CCCCCCCeEEEeecc
Q psy255 44 KFLNQGDPVIVVTGW 58 (70)
Q Consensus 44 g~~~~GD~vv~~~g~ 58 (70)
..+.+||.+|+++.+
T Consensus 104 ~~~~~~Dv~I~iS~S 118 (243)
T 3cvj_A 104 HQVTNKDVIMIISNS 118 (243)
T ss_dssp TTCCTTCEEEEECSS
T ss_pred hcCCCCCEEEEEeCC
Confidence 447899999999876
No 329
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.12 E-value=45 Score=16.38 Aligned_cols=18 Identities=17% Similarity=0.346 Sum_probs=13.9
Q ss_pred CCCCCCCCeEEEeecccC
Q psy255 43 RKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~~ 60 (70)
.|-+++||.|+-+-|.+.
T Consensus 51 agGL~~GD~I~~ing~~v 68 (100)
T 2edp_A 51 SQKMRTGDELVNINGTPL 68 (100)
T ss_dssp HTSCCTTCEEEEETTEEC
T ss_pred cCCCCCCCEEEEECCEEc
Confidence 445689999999888753
No 330
>3dfg_A Xcrecx, regulatory protein RECX; RECX RECA, homologous recombination, tandem repeats, three-helix bundle, cytoplasm; 1.50A {Xanthomonas campestris PV}
Probab=24.09 E-value=76 Score=17.43 Aligned_cols=20 Identities=0% Similarity=-0.026 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhCCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLNQ 48 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~ 48 (70)
.++.++.+++.+++.|++.+
T Consensus 47 ~~e~Ie~vl~~l~~~g~ldD 66 (162)
T 3dfg_A 47 EPEAAQAAVERLAGEGWQDD 66 (162)
T ss_dssp CHHHHHHHHHHHHHTTSCCH
T ss_pred CHHHHHHHHHHHHHcCCCCH
Confidence 35679999999999999854
No 331
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=24.06 E-value=67 Score=17.31 Aligned_cols=15 Identities=20% Similarity=0.379 Sum_probs=12.5
Q ss_pred CCCCCCCeEEEeecc
Q psy255 44 KFLNQGDPVIVVTGW 58 (70)
Q Consensus 44 g~~~~GD~vv~~~g~ 58 (70)
..+.++|.+++++..
T Consensus 78 ~~~~~~d~vi~iS~s 92 (180)
T 1jeo_A 78 PSYEKDDLLILISGS 92 (180)
T ss_dssp CCCCTTCEEEEEESS
T ss_pred ccCCCCCEEEEEeCC
Confidence 567899999998876
No 332
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=23.99 E-value=51 Score=16.94 Aligned_cols=13 Identities=38% Similarity=0.325 Sum_probs=11.3
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++.-.
T Consensus 36 l~~GdlVAVl~k~ 48 (92)
T 1ug1_A 36 LLEGDLVGVIKKK 48 (92)
T ss_dssp CCTTCEEEEEESC
T ss_pred ecCCCEEEEEecC
Confidence 6899999999875
No 333
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=23.98 E-value=51 Score=20.25 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=17.0
Q ss_pred HHHHHhCCCCCCCCeEEEeeccc
Q psy255 37 IKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 37 ~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
+..+-+++++++|+.||=+...|
T Consensus 62 L~EIdeK~likpg~~VVDLGaAP 84 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGR 84 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTT
T ss_pred HHHHHHcCCCCCCCEEEEcCCCC
Confidence 44556667999999999765544
No 334
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=23.93 E-value=1.3e+02 Score=19.27 Aligned_cols=28 Identities=11% Similarity=0.031 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 50 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 77 (517)
T 3r44_A 50 NALANRCADVLTALGI-AKGDRVALLMPN 77 (517)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCcCEEEEEcCC
Confidence 3445555566778884 899999987653
No 335
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=23.92 E-value=1e+02 Score=19.36 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
+..+++. ++.+.--+++||.| .+|.+.+
T Consensus 260 ~~~~lIa----~lS~~~tL~pGDvI--~TGTp~G 287 (329)
T 3r6o_A 260 GFAEVVE----TVSATIALRAGDII--LTGTPGG 287 (329)
T ss_dssp CHHHHHH----HHHTTSCBCTTCEE--ECCCCSC
T ss_pred CHHHHHH----HHHcCCCcCCCCEE--EcCCccc
Confidence 4555444 44455678999974 5677644
No 336
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=23.92 E-value=52 Score=14.56 Aligned_cols=13 Identities=23% Similarity=0.192 Sum_probs=10.3
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
-+++||.|.++..
T Consensus 25 s~~~Gd~i~v~~~ 37 (65)
T 3u23_A 25 ELKVGDIIDINEE 37 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4689999988764
No 337
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=23.90 E-value=52 Score=14.48 Aligned_cols=12 Identities=17% Similarity=0.396 Sum_probs=10.0
Q ss_pred CCCCCCeEEEee
Q psy255 45 FLNQGDPVIVVT 56 (70)
Q Consensus 45 ~~~~GD~vv~~~ 56 (70)
-+++||.|.++.
T Consensus 23 s~~~Gd~i~v~~ 34 (63)
T 3eg3_A 23 SITKGEKLRVLG 34 (63)
T ss_dssp CBCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 368999999986
No 338
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=23.89 E-value=1.3e+02 Score=18.47 Aligned_cols=26 Identities=8% Similarity=0.181 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
...++..+.++|.+++|++.|+.++.
T Consensus 70 A~~~i~~a~~~g~l~~g~~~Vv~aSs 95 (344)
T 3vc3_A 70 AYAMITDAEEKNLITPGKTTLIEPTS 95 (344)
T ss_dssp HHHHHHHHHHTTCCCTTTCEEEEECS
T ss_pred HHHHHHHHHHcCCCCCCCCEEEEeCC
Confidence 45567788999999999876665543
No 339
>2epi_A UPF0045 protein MJ1052; NPPSFA, national project on protein structural and functiona analyses; 1.70A {Methanocaldococcus jannaschii} PDB: 2eky_A
Probab=23.78 E-value=77 Score=16.17 Aligned_cols=26 Identities=19% Similarity=0.083 Sum_probs=16.5
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHhCCC
Q psy255 18 IEPSPADWLRDVDTRVAHGIKYGRDRKF 45 (70)
Q Consensus 18 v~~~~~~~~~~~~~~~~~a~~~~~~~g~ 45 (70)
+.|+- ...+....+..+++.+++.|+
T Consensus 13 v~Plg--~~~svs~~Va~~i~~l~~sGl 38 (100)
T 2epi_A 13 IIPLG--KGASVSKYVKKAIEVFKKYDL 38 (100)
T ss_dssp EEEEC--BSSCCHHHHHHHHHHHTTSSC
T ss_pred EEeCC--CCCCHHHHHHHHHHHHHHcCC
Confidence 56653 234556677777777777665
No 340
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=23.78 E-value=95 Score=16.75 Aligned_cols=40 Identities=8% Similarity=0.092 Sum_probs=25.9
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 18 IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 18 v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
+.++-++...++++..+...+.+++.. ..||-|++.....
T Consensus 32 v~av~~~~~~~~~~~~~~i~~~i~~~~--~~~~gvliLtDl~ 71 (144)
T 3lfh_A 32 VHTVGLNLGDNIEVVRKEVEKIIKEKL--QEDKEIIIVVDLF 71 (144)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHHHH--TTTCEEEEEESSS
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHhh--CCCCcEEEEEeCC
Confidence 455545555677877777777766630 4688888877653
No 341
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=23.74 E-value=23 Score=19.80 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=13.9
Q ss_pred CCCCCCeEEEeecccCC
Q psy255 45 FLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~~ 61 (70)
.++.||.|-++.|...+
T Consensus 127 ~~~~Gd~V~V~~GPf~g 143 (181)
T 2jvv_A 127 LFEPGEMVRVNDGPFAD 143 (181)
T ss_dssp CCCTTEEEEECSSTTTT
T ss_pred cCCCCCEEEEeccCCCC
Confidence 56799999999997544
No 342
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=23.71 E-value=95 Score=19.98 Aligned_cols=28 Identities=7% Similarity=-0.050 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++.....-..+.+.|+ ++||+|.+....
T Consensus 57 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n 84 (550)
T 3rix_A 57 FEMSVRLAEAMKRYGL-NTNHRIVVCSEN 84 (550)
T ss_dssp HHHHHHHHHHHHHHTC-CTTCEEEEECSS
T ss_pred HHHHHHHHHHHHHhCC-CCCCEEEEEcCC
Confidence 3445555566777885 899999988654
No 343
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=23.70 E-value=52 Score=14.92 Aligned_cols=12 Identities=17% Similarity=0.379 Sum_probs=9.8
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++.-
T Consensus 26 f~~Gd~i~v~~~ 37 (68)
T 1tg0_A 26 FEKDQEIIVTSV 37 (68)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999998863
No 344
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=23.69 E-value=1.3e+02 Score=19.31 Aligned_cols=28 Identities=11% Similarity=-0.128 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 59 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 86 (549)
T 3g7s_A 59 CEVTKKLASGISRKGV-RKGEHVGVCIPN 86 (549)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEECCC
Confidence 3445555566778884 899999987653
No 345
>4a56_A PULS, pullulanase secretion protein PULS; protein transport, T2SS; 1.24A {Klebsiella oxytoca}
Probab=23.66 E-value=84 Score=16.09 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=16.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCC
Q psy255 26 LRDVDTRVAHGIKYGRDRKFL 46 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~ 46 (70)
..+.+.+...|+.+++++||-
T Consensus 29 iPd~~~I~~~a~~~A~~~~Wd 49 (93)
T 4a56_A 29 LPADEAINRAAINVGKKRGWA 49 (93)
T ss_dssp SCCHHHHHHHHHHHHHHHTCC
T ss_pred CCcHHHHHHHHHHHHHHcCCC
Confidence 345667899999999999984
No 346
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=23.61 E-value=1.3e+02 Score=18.98 Aligned_cols=28 Identities=14% Similarity=0.011 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++.....-..+.+.|+ ++||+|.+....
T Consensus 38 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 65 (509)
T 3ivr_A 38 LARAERLASGLLRDGV-HTGDRVAILSQN 65 (509)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 4445555566778884 899999987653
No 347
>3ic7_A Putative transcriptional regulator; helix-turn-helix, structural genomics, PSI-2, protein struct initiative; 2.82A {Bacteroides thetaiotaomicron}
Probab=23.61 E-value=75 Score=16.52 Aligned_cols=22 Identities=9% Similarity=-0.067 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCeE
Q psy255 31 TRVAHGIKYGRDRKFLNQGDPV 52 (70)
Q Consensus 31 ~~~~~a~~~~~~~g~~~~GD~v 52 (70)
+.+...+...+..|-+++||++
T Consensus 14 ~~i~~~l~~~I~~g~~~~G~~l 35 (126)
T 3ic7_A 14 LQIADRICDDILLGQYEEEGRI 35 (126)
T ss_dssp THHHHHHHHHHHTTSSCBTSEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcC
Confidence 4466677778888999999986
No 348
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=23.58 E-value=41 Score=17.24 Aligned_cols=11 Identities=36% Similarity=0.453 Sum_probs=9.0
Q ss_pred CCCCCCeEEEe
Q psy255 45 FLNQGDPVIVV 55 (70)
Q Consensus 45 ~~~~GD~vv~~ 55 (70)
-++.||+|++-
T Consensus 58 ~VkvGD~Vl~~ 68 (95)
T 3nx6_A 58 VVKVGDKVIYG 68 (95)
T ss_dssp SCCTTCEEEEC
T ss_pred ccCCCCEEEEC
Confidence 47999999874
No 349
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=23.51 E-value=48 Score=16.19 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=13.4
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
| +++||.|+-+-|.+.
T Consensus 21 G-L~~GD~Il~InG~~v 36 (94)
T 2kl1_A 21 R-LEAGDRIAAIDGQPI 36 (94)
T ss_dssp T-BCTTCEEEEETTBCC
T ss_pred C-CCCCCEEEEECCEEC
Confidence 6 799999999988753
No 350
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=23.51 E-value=77 Score=18.41 Aligned_cols=29 Identities=24% Similarity=0.194 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+..+++.+. .+.--+++||.| .+|.+.+
T Consensus 169 ~~~~~lia~l----S~~~tL~pGDvI--~TGTp~G 197 (221)
T 3s52_A 169 TPIIPLISYM----SRFFTLRAGDIV--LTGTPQG 197 (221)
T ss_dssp SCHHHHHHHH----HHHSCBCTTCEE--ECCCCSC
T ss_pred CCHHHHHHHH----hCCCCcCCCCEE--EeCCCCc
Confidence 3555555544 445668999975 5676543
No 351
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=23.42 E-value=1.3e+02 Score=19.27 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 56 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~ 83 (536)
T 3ni2_A 56 ELTARRVASGLNKIGI-QQGDVIMLFLPS 83 (536)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 3445555566778885 899999987643
No 352
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=23.40 E-value=53 Score=14.94 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (71)
T 2jt4_A 25 IKSGDKVYILDD 36 (71)
T ss_dssp BCTTCEEEEEES
T ss_pred CCCCCEEEEEEC
Confidence 589999999874
No 353
>3sxy_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.65A {Thermotoga maritima} PDB: 3dbw_A 3fms_A*
Probab=23.35 E-value=1.1e+02 Score=17.22 Aligned_cols=23 Identities=22% Similarity=0.104 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeE
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPV 52 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~v 52 (70)
.+.+...++..+-.|-+++||++
T Consensus 14 ~~~v~~~l~~~I~~g~l~pG~~L 36 (218)
T 3sxy_A 14 RTKVYNLLKEMILNHELKLGEKL 36 (218)
T ss_dssp CHHHHHHHHHHHHTTSSCTTCEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCEe
Confidence 35567777788888999999987
No 354
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=23.30 E-value=50 Score=14.33 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=10.3
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 20 ~~~Gd~i~v~~~~ 32 (58)
T 1zuu_A 20 ITPGDKISLVARD 32 (58)
T ss_dssp BCTTCCEEEEECC
T ss_pred CCCCCEEEEeEcC
Confidence 5899999988643
No 355
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=23.30 E-value=54 Score=14.43 Aligned_cols=14 Identities=21% Similarity=0.301 Sum_probs=10.6
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 24 s~~~Gd~i~v~~~~ 37 (64)
T 4f14_A 24 SFRDGDYIVNVQPI 37 (64)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEeC
Confidence 36899999887643
No 356
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=23.28 E-value=72 Score=17.38 Aligned_cols=19 Identities=11% Similarity=0.282 Sum_probs=14.2
Q ss_pred HHHHhCCCCCCCCeEEEeec
Q psy255 38 KYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 38 ~~~~~~g~~~~GD~vv~~~g 57 (70)
++++++++ +.||.+++---
T Consensus 110 ~Fv~dn~L-~~GD~cvFeli 128 (146)
T 4i1k_A 110 EFTLENNL-GEGDVCVFELL 128 (146)
T ss_dssp HHHHHTTC-CTTCEEEEEEC
T ss_pred HHHHHcCC-CCCCEEEEEEe
Confidence 56667775 79999997654
No 357
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.19 E-value=55 Score=14.79 Aligned_cols=12 Identities=8% Similarity=0.523 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 1x2p_A 26 FLRGEKILILRQ 37 (68)
T ss_dssp CCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 589999999875
No 358
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=23.10 E-value=56 Score=14.78 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=9.9
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 2djq_A 26 FNKGDVILLRRQ 37 (68)
T ss_dssp CCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 589999998764
No 359
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=23.10 E-value=43 Score=17.38 Aligned_cols=11 Identities=27% Similarity=0.480 Sum_probs=9.0
Q ss_pred CCCCCCeEEEe
Q psy255 45 FLNQGDPVIVV 55 (70)
Q Consensus 45 ~~~~GD~vv~~ 55 (70)
-++.||+|++-
T Consensus 63 ~VkvGD~Vlf~ 73 (100)
T 1we3_O 63 EVKEGDIVVFA 73 (100)
T ss_dssp SCCTTCEEEEC
T ss_pred ecCCCCEEEEC
Confidence 37999999874
No 360
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=23.09 E-value=54 Score=14.87 Aligned_cols=12 Identities=33% Similarity=0.595 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 ~~~Gd~i~v~~~ 33 (69)
T 1ruw_A 22 LKKGDIVFISRD 33 (69)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999875
No 361
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=23.07 E-value=39 Score=17.46 Aligned_cols=18 Identities=6% Similarity=-0.005 Sum_probs=13.8
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|+ ++||.++-+-|.+
T Consensus 53 ~~AGL-~~GD~I~~Ing~~ 70 (101)
T 3qik_A 53 EVAGL-QVGRKIYSINEDL 70 (101)
T ss_dssp HHHTC-CTTCBEEEETTEE
T ss_pred HHcCC-CCCCEEEEECCEE
Confidence 34464 8999999998865
No 362
>3sol_A Type II secretion pathway related protein; general secretory pathway, protein transport, pilotin; 1.90A {Escherichia coli}
Probab=23.01 E-value=88 Score=16.06 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=17.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCC
Q psy255 26 LRDVDTRVAHGIKYGRDRKFL 46 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~ 46 (70)
..+.+.+...|+.+++++||-
T Consensus 29 iPd~~~I~~~a~~~A~~~gWD 49 (94)
T 3sol_A 29 LPDEQSILNVANRIAIGKGWQ 49 (94)
T ss_dssp SCCHHHHHHHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHHHHHHHcCCC
Confidence 345667899999999999984
No 363
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=22.91 E-value=56 Score=14.30 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=11.0
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 24 s~~~Gd~i~v~~~~ 37 (62)
T 3ngp_A 24 TVKKGDILTLLNST 37 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEeEec
Confidence 36899999998753
No 364
>2ibo_A Hypothetical protein SP2199; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Streptococcus pneumoniae TIGR4} SCOP: d.58.48.1
Probab=22.91 E-value=75 Score=16.40 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=12.9
Q ss_pred CHHHHHHHHHHHHHhCCC
Q psy255 28 DVDTRVAHGIKYGRDRKF 45 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~ 45 (70)
+....+..+++.+++.|+
T Consensus 17 svs~~Va~~i~vl~~sGl 34 (104)
T 2ibo_A 17 DRIAVIDQVIAYLQTQEV 34 (104)
T ss_dssp HHHHHHHHHHHHHHHSSS
T ss_pred cHHHHHHHHHHHHHHcCC
Confidence 455667778888877775
No 365
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=22.82 E-value=44 Score=17.22 Aligned_cols=13 Identities=38% Similarity=0.662 Sum_probs=10.5
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
++.||+|++--|.
T Consensus 59 VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 59 VKVGDIVIFNDGY 71 (97)
T ss_dssp CCTTCEEEECCCS
T ss_pred cCCCCEEEECCcc
Confidence 7999999987633
No 366
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.81 E-value=49 Score=15.05 Aligned_cols=13 Identities=15% Similarity=0.445 Sum_probs=10.7
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 26 ~~~Gd~i~v~~~~ 38 (71)
T 2cre_A 26 FSRGDILTILEQH 38 (71)
T ss_dssp CCSSCCEEEEESC
T ss_pred CCCCCEEEEeEcC
Confidence 5899999998763
No 367
>2h8e_A Crossover junction endodeoxyribonuclease RUSA; homologous recombination, DNA repair, resolvase, hydrolase; 1.20A {Escherichia coli} PDB: 2h8c_A 1q8r_A
Probab=22.75 E-value=61 Score=16.82 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCeEEEee
Q psy255 26 LRDVDTRVAHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
..|.|++.....+.+...|+..+...|+-..
T Consensus 68 k~D~DN~~K~~~Dal~~~Gv~~DD~qv~~~~ 98 (120)
T 2h8e_A 68 RRNLDNLQKAAFDALTKAGFWLDDAQVVDYR 98 (120)
T ss_dssp CCCTHHHHHHHHHHHHHHTSBSCGGGEEEEE
T ss_pred CCCccchHHHHHHHhcCCCcEeCCceEEEEE
Confidence 4688999999999999999888777766443
No 368
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=22.73 E-value=56 Score=14.83 Aligned_cols=13 Identities=23% Similarity=0.320 Sum_probs=10.6
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 22 ~~~Gd~i~v~~~~ 34 (69)
T 1wyx_A 22 FRKGDIMTVLEQD 34 (69)
T ss_dssp BCTTCEEEEEETT
T ss_pred CcCCCEEEEeECC
Confidence 6899999998754
No 369
>2qw7_A Carbon dioxide concentrating mechanism protein CC; pentamer, structural protein; HET: GOL; 2.40A {Synechocystis SP} SCOP: b.40.15.1
Probab=22.61 E-value=59 Score=17.22 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=12.1
Q ss_pred CCCCCeEEEeeccc
Q psy255 46 LNQGDPVIVVTGWK 59 (70)
Q Consensus 46 ~~~GD~vv~~~g~~ 59 (70)
+..||.|++++|+.
T Consensus 49 AG~Ge~Vlv~~GSa 62 (111)
T 2qw7_A 49 AGLNEWVLVARGSA 62 (111)
T ss_dssp CCTTCEEEEEEGGG
T ss_pred CCCCCEEEEeCCHH
Confidence 56899999999975
No 370
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=22.54 E-value=83 Score=18.38 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
.+..+++.+. .+.--+++||.| .+|.+.+
T Consensus 167 ~~~~~lia~l----S~~~tL~pGDvI--~TGTp~G 195 (224)
T 3l53_A 167 FPILPLIAHM----SEHFSLQPGDVI--LTGTPAG 195 (224)
T ss_dssp SCHHHHHHHH----HHHSCBCTTCEE--ECCCCSC
T ss_pred CCHHHHHHHH----HCCCCcCCCCEE--EcCCCCC
Confidence 3555555544 445667999976 5666543
No 371
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=22.51 E-value=84 Score=17.53 Aligned_cols=20 Identities=15% Similarity=0.125 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhCCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLNQ 48 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~ 48 (70)
.++.+..+++.+++.|++.+
T Consensus 48 ~~~~ie~vl~~L~~~g~ldD 67 (177)
T 3e3v_A 48 HEDYISEIINKLIDLDLIND 67 (177)
T ss_dssp CHHHHHHHHHHHHHTTSSCH
T ss_pred CHHHHHHHHHHHHHcCCCCH
Confidence 46789999999999999853
No 372
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=22.48 E-value=57 Score=14.71 Aligned_cols=12 Identities=33% Similarity=0.520 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 2dl3_A 26 LQKGDIVYIYKQ 37 (68)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEeEe
Confidence 589999999874
No 373
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=22.47 E-value=57 Score=14.78 Aligned_cols=12 Identities=17% Similarity=0.346 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 f~~Gd~i~v~~~ 33 (65)
T 1b07_A 22 FKKGDILRIRDK 33 (65)
T ss_dssp BCTTCEEEEEEC
T ss_pred CcCCCEEEEEEe
Confidence 689999999875
No 374
>3bbn_Q Ribosomal protein S17; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=22.46 E-value=55 Score=18.17 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=13.7
Q ss_pred CCCCCCCeEEEeecccC
Q psy255 44 KFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~~ 60 (70)
+.++.||.|.+...-|.
T Consensus 106 n~~kvGD~V~I~E~RPL 122 (142)
T 3bbn_Q 106 NQFKVGDVVRLEKSRPI 122 (142)
T ss_dssp CCCCTTEEEEEEECCCS
T ss_pred CCCCCCCEEEEEEccCC
Confidence 46899999999887653
No 375
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=22.46 E-value=58 Score=14.60 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=9.9
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 8 ~~~Gd~i~v~~~ 19 (63)
T 1tuc_A 8 MKKGDILTLLNS 19 (63)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 578999999874
No 376
>3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis}
Probab=22.45 E-value=55 Score=21.09 Aligned_cols=13 Identities=15% Similarity=0.370 Sum_probs=10.3
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|+.+..+
T Consensus 179 ak~GD~IIgl~S~ 191 (389)
T 3mdo_A 179 IQGGDVIVGLASS 191 (389)
T ss_dssp CCTTCEEEEEESS
T ss_pred CCCCCEEEEECCc
Confidence 6788888888765
No 377
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=22.39 E-value=45 Score=17.24 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=9.6
Q ss_pred CCCCCCeEEEee
Q psy255 45 FLNQGDPVIVVT 56 (70)
Q Consensus 45 ~~~~GD~vv~~~ 56 (70)
-++.||+|++--
T Consensus 61 ~VkvGD~Vlf~k 72 (99)
T 1p3h_A 61 DVAEGDTVIYSK 72 (99)
T ss_dssp SCCTTCEEEEEC
T ss_pred ccCCCCEEEECC
Confidence 488999999753
No 378
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=22.37 E-value=57 Score=20.93 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCC-CCCCCCeEEEee
Q psy255 33 VAHGIKYGRDRK-FLNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g-~~~~GD~vv~~~ 56 (70)
+-.++..+.+.| .+++||+|++.+
T Consensus 331 i~l~L~~~l~~~~~~~~Gd~ill~s 355 (450)
T 2f82_A 331 LYAAFASLVHNKHSDLAGKRVVMFS 355 (450)
T ss_dssp HHHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHHHhCccCCCCCEEEEEe
Confidence 445566666666 378999998775
No 379
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.37 E-value=57 Score=15.95 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=13.4
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.+-+++||.|+-+-|.+
T Consensus 45 ~aGL~~GD~I~~vng~~ 61 (96)
T 1ujv_A 45 CPGLCEGDLIVEINQQN 61 (96)
T ss_dssp STTCCSSCEEEEETTEE
T ss_pred cCCCCCCCEEEEECCEE
Confidence 34468999999988865
No 380
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=22.35 E-value=57 Score=14.71 Aligned_cols=13 Identities=23% Similarity=0.422 Sum_probs=10.6
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|.++...
T Consensus 21 ~~~Gd~i~v~~~~ 33 (67)
T 1gl5_A 21 LERGQEYIILEKN 33 (67)
T ss_dssp BCTTCEEEEEECS
T ss_pred CCcCCEEEEEEcc
Confidence 5899999998753
No 381
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.34 E-value=44 Score=16.13 Aligned_cols=18 Identities=22% Similarity=0.481 Sum_probs=13.8
Q ss_pred hCCCCCCCCeEEEeecccC
Q psy255 42 DRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~~ 60 (70)
+.| +++||.|+-+-|.+.
T Consensus 45 ~aG-L~~GD~I~~ing~~v 62 (94)
T 1vb7_A 45 AAD-LRPGDIIVAINGQSA 62 (94)
T ss_dssp HHT-CCTTCEEEEETTEEC
T ss_pred HCC-CCCCCEEEEECCEEC
Confidence 346 589999999888753
No 382
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=22.33 E-value=47 Score=18.43 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=15.1
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
.+.|.+++||.|+-+-|.+
T Consensus 149 ~~aG~l~~GD~I~~ing~~ 167 (200)
T 2qt5_A 149 DREGTIKPGDRLLSVDGIR 167 (200)
T ss_dssp HHHCCCCTTCEEEEETTEE
T ss_pred HHcCCCCCCCEEEEECCEE
Confidence 3457679999999988865
No 383
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=22.31 E-value=57 Score=14.99 Aligned_cols=12 Identities=25% Similarity=0.587 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 28 ~~~Gd~i~v~~~ 39 (73)
T 2k9g_A 28 IKEGDIVTLINK 39 (73)
T ss_dssp BCTTCEEEEEEC
T ss_pred ECCCCEEEEEEC
Confidence 689999999875
No 384
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=22.30 E-value=97 Score=17.40 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=16.8
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
|..+.+..+++.+.+. -|.|+.+.|..
T Consensus 47 Dd~~~I~~~l~~a~~~-----~DlVittGG~g 73 (172)
T 3kbq_A 47 DDLDEIGWAFRVALEV-----SDLVVSSGGLG 73 (172)
T ss_dssp SCHHHHHHHHHHHHHH-----CSEEEEESCCS
T ss_pred CCHHHHHHHHHHHHhc-----CCEEEEcCCCc
Confidence 3345566666666543 58887777764
No 385
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=22.29 E-value=58 Score=14.67 Aligned_cols=12 Identities=8% Similarity=0.476 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (67)
T 2o9s_A 25 FRKGERITLLRQ 36 (67)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999874
No 386
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=22.29 E-value=94 Score=18.13 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeec
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.+.+...+++.+++.|+--+.|.+.++.|
T Consensus 212 nd~~A~g~~~al~~~g~~vP~d~i~vv~g 240 (330)
T 3uug_A 212 YDGLSIGIISSLKGVGYGTKDQPLPVVSG 240 (330)
T ss_dssp SHHHHHHHHHHHHHTTCSSSSSCCCEECC
T ss_pred CCchHHHHHHHHHHcCCCCCCCceEEEEe
Confidence 45666678899999999878884544433
No 387
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.29 E-value=59 Score=14.75 Aligned_cols=12 Identities=17% Similarity=0.493 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 2dl4_A 26 MRPGDIITLLED 37 (68)
T ss_dssp CCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 689999999874
No 388
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=22.28 E-value=57 Score=15.06 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 18 ~~~Gd~i~v~~~ 29 (73)
T 2kxd_A 18 MKKGDILTLLNS 29 (73)
T ss_dssp BCTTCEEEEEEC
T ss_pred EcCCCEEEEEEe
Confidence 589999999875
No 389
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=22.19 E-value=1.1e+02 Score=16.77 Aligned_cols=28 Identities=14% Similarity=0.076 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
|..+.+..+++.+.+++ -|.|+.+.|..
T Consensus 53 Dd~~~I~~~l~~a~~~~----~DlVittGG~g 80 (167)
T 2g2c_A 53 EGYDTVVEAIATALKQG----ARFIITAGGTG 80 (167)
T ss_dssp SSHHHHHHHHHHHHHTT----CSEEEEESCCS
T ss_pred CCHHHHHHHHHHHHhCC----CCEEEECCCCC
Confidence 44456666777666543 47777776664
No 390
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=22.18 E-value=68 Score=14.69 Aligned_cols=23 Identities=17% Similarity=0.332 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCC
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGD 50 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD 50 (70)
..+..+.+++......||=..|.
T Consensus 5 ~~D~rl~~al~qMl~MGF~negG 27 (52)
T 1q02_A 5 EADPRLIESLSQMLSMGFSDEGG 27 (52)
T ss_dssp TSCHHHHHHHHHHHTTTCCCTTS
T ss_pred CcChHHHHHHHHHHHcCCCcccc
Confidence 44577888999999999977765
No 391
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=22.17 E-value=45 Score=15.88 Aligned_cols=17 Identities=29% Similarity=0.527 Sum_probs=13.4
Q ss_pred hCCCCCCCCeEEEeeccc
Q psy255 42 DRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 42 ~~g~~~~GD~vv~~~g~~ 59 (70)
+.| +++||.++-+-|.+
T Consensus 19 ~aG-l~~GD~I~~ing~~ 35 (91)
T 2zpm_A 19 XAG-LQAGDRIVXVDGQP 35 (91)
T ss_dssp HTT-CCTTCEEEEETTEE
T ss_pred hcC-CCCCCEEEEECCeE
Confidence 346 68999999988864
No 392
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=22.12 E-value=58 Score=14.94 Aligned_cols=12 Identities=17% Similarity=0.473 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 f~~Gd~i~v~~~ 33 (68)
T 2ew3_A 22 FKEGDIITLTNQ 33 (68)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999874
No 393
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=22.11 E-value=58 Score=14.77 Aligned_cols=13 Identities=15% Similarity=0.327 Sum_probs=10.5
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
-+++||.|.++..
T Consensus 31 s~~~Gd~i~v~~~ 43 (72)
T 4glm_A 31 DFEVGDKIRILAT 43 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 3689999998874
No 394
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=22.08 E-value=59 Score=14.42 Aligned_cols=14 Identities=7% Similarity=0.036 Sum_probs=10.8
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 27 s~~~Gd~i~v~~~~ 40 (65)
T 3ulr_B 27 SFDPDDIITNIEMI 40 (65)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEecCCEEEEEEec
Confidence 36899999988653
No 395
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.04 E-value=51 Score=17.68 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=26.2
Q ss_pred hhcccceeeecCC-C-CC--CH-HHHHHHHHHHHHhCCCCCCCCeEE
Q psy255 12 QVLIGKIEPSPAD-W-LR--DV-DTRVAHGIKYGRDRKFLNQGDPVI 53 (70)
Q Consensus 12 ~l~l~~v~~~~~~-~-~~--~~-~~~~~~a~~~~~~~g~~~~GD~vv 53 (70)
.|.+.|+.|+.+. . .. +- .+.-..|...+|+.|++.+++.-+
T Consensus 54 tl~l~WP~~mef~a~G~rK~eAE~kAAA~AC~kLK~Lgll~p~n~pl 100 (119)
T 2db2_A 54 TLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELF 100 (119)
T ss_dssp EEEECSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHTSSCTTCCCC
T ss_pred EEEecCCCcEEEEeeccchHHHHHHHHHHHHHHHHHcCccCCCCCcc
Confidence 4678884444322 1 11 22 244667788899999999887654
No 396
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=22.01 E-value=45 Score=16.05 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=12.9
Q ss_pred CCCCCCeEEEeecccC
Q psy255 45 FLNQGDPVIVVTGWKK 60 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~ 60 (70)
-+++||.|+-+-|.+.
T Consensus 51 gL~~GD~I~~vng~~v 66 (95)
T 1mfg_A 51 LLQPGDKIIQANGYSF 66 (95)
T ss_dssp TCCTTCEEEEETTEEC
T ss_pred CCCCCCEEEEECCEEc
Confidence 3689999999888753
No 397
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=21.87 E-value=59 Score=14.69 Aligned_cols=14 Identities=21% Similarity=0.185 Sum_probs=10.7
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 24 s~~~Gd~i~v~~~~ 37 (69)
T 4esr_A 24 TIHRGDIIRVFFKD 37 (69)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEec
Confidence 36899999988643
No 398
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=21.84 E-value=1.4e+02 Score=17.79 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecccCCCCCC
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFT 65 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~~~~g~t 65 (70)
...+...+..+.....-..--.+++++|.+ |+|.|
T Consensus 13 ~~~~~~~~~~~l~~~~~~~~~~livl~G~s-GsGKS 47 (287)
T 1gvn_B 13 ENRLNDNLEELIQGKKAVESPTAFLLGGQP-GSGKT 47 (287)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCEEEEEECCT-TSCTH
T ss_pred HHHHHHHHHHHhccccCCCCCeEEEEECCC-CCCHH
Confidence 344555555555443322334677787854 44543
No 399
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=21.84 E-value=58 Score=15.37 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 21 ~~~Gd~i~v~~~ 32 (80)
T 2pqh_A 21 MKKGDILTLLNS 32 (80)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 589999999875
No 400
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.83 E-value=53 Score=15.22 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=10.3
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (77)
T 2d8j_A 26 FRAGDKLQVLDT 37 (77)
T ss_dssp BCTTCCEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 589999999875
No 401
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=21.79 E-value=61 Score=14.23 Aligned_cols=12 Identities=17% Similarity=0.564 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 23 ~~~Gd~i~v~~~ 34 (60)
T 1w70_A 23 FKAGDVIFLLSR 34 (60)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999998874
No 402
>3mhx_A Putative ferrous iron transport protein A; FEOA, zinc binding, prokaryotic SH3 stenotrophomonus maltophilia, metal transport; 1.70A {Stenotrophomonas maltophilia}
Probab=21.79 E-value=81 Score=15.18 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=19.5
Q ss_pred HHHHHHhCCCCCCCCeEEEeecccC
Q psy255 36 GIKYGRDRKFLNQGDPVIVVTGWKK 60 (70)
Q Consensus 36 a~~~~~~~g~~~~GD~vv~~~g~~~ 60 (70)
..+++.+.|+ .+|..|-++...|.
T Consensus 27 ~~~rL~~lGl-~pG~~v~V~~~~p~ 50 (85)
T 3mhx_A 27 IARRLRELGF-VKGEEVRMVAKGPV 50 (85)
T ss_dssp HHHHHHHTTC-CTTCEEEEEESCSS
T ss_pred HHHHHHHCCC-CCCCEEEEEEeCCC
Confidence 4678889998 59999999887664
No 403
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=21.76 E-value=1.1e+02 Score=17.87 Aligned_cols=15 Identities=27% Similarity=0.233 Sum_probs=13.0
Q ss_pred CCCCCCCeEEEeecc
Q psy255 44 KFLNQGDPVIVVTGW 58 (70)
Q Consensus 44 g~~~~GD~vv~~~g~ 58 (70)
.-+..||.+|++.|.
T Consensus 156 ~~~~~gd~iIi~~~~ 170 (200)
T 2p8t_A 156 VDYEDGDAVIITWAE 170 (200)
T ss_dssp CSCCTTCEEEEEECS
T ss_pred cCCCCCCEEEEEeCC
Confidence 667899999999886
No 404
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=21.76 E-value=72 Score=17.37 Aligned_cols=23 Identities=13% Similarity=0.137 Sum_probs=15.9
Q ss_pred HHHHHHHhCCCCCCCCeEEEeec
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
.|...+.+.+-+++|+.|+++.+
T Consensus 25 ta~~~l~~~~~~~~g~~vlV~Ga 47 (198)
T 1pqw_A 25 TAWHSLCEVGRLSPGERVLIHSA 47 (198)
T ss_dssp HHHHHHHTTSCCCTTCEEEETTT
T ss_pred HHHHHHHHHhCCCCCCEEEEeeC
Confidence 34444556667899999888764
No 405
>4anr_A Soluble lytic transglycosylase B; lyase, EF-hand like motif, peptidoglycan; 1.84A {Pseudomonas aeruginosa}
Probab=21.72 E-value=1.3e+02 Score=18.85 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=21.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCeEEE
Q psy255 27 RDVDTRVAHGIKYGRDRKFLNQGDPVIV 54 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~~GD~vv~ 54 (70)
.++++.+..+-++|+..|| ++|..+..
T Consensus 204 ~~~~Dai~S~AnyL~~~GW-~~g~pwg~ 230 (323)
T 4anr_A 204 SDPTDAIGSVASYFKQHGW-VTGEPVVS 230 (323)
T ss_dssp TCHHHHHHHHHHHHHHTTC-CTTCCCEE
T ss_pred CCHHHHHHHHHHHHHHcCC-CCCCCeEE
Confidence 3677888999999999999 56665543
No 406
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=21.66 E-value=46 Score=14.58 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=9.8
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 22 ~~~Gd~i~v~~~ 33 (60)
T 2x3w_D 22 FKAGDELTKLGE 33 (60)
T ss_dssp BCTTCEEEECSC
T ss_pred CCCCCEEEEEEc
Confidence 589999998764
No 407
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=21.65 E-value=1.4e+02 Score=18.00 Aligned_cols=38 Identities=0% Similarity=-0.236 Sum_probs=21.6
Q ss_pred HHhhhcccc--eeeecCCCCCCHHHHHHHHHHHHHhCCCCC
Q psy255 9 IPKQVLIGK--IEPSPADWLRDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 9 ~~r~l~l~~--v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~ 47 (70)
.+++|..-+ .+-+..+.....++. -.|++.+++.|.++
T Consensus 135 SL~rL~~dyiDL~~~H~~~~~~~~e~-~~al~~l~~~Gkir 174 (314)
T 3b3d_A 135 SLSKLGLDYLDLYLIHWPVEGKYKEA-WRALETLYKEGRIK 174 (314)
T ss_dssp HHHHHTCSCEEEEEESSCCTTTHHHH-HHHHHHHHHTTSEE
T ss_pred HHHHhCCCcccccccccccccchhHH-HHHHHHHHHCCCEe
Confidence 455666555 333333333334443 46788899999874
No 408
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=21.65 E-value=60 Score=15.20 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (80)
T 1ue9_A 26 LAPGQLILILKK 37 (80)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 589999999875
No 409
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=21.58 E-value=78 Score=19.15 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeec
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
..|...+.+.+-+++||.|+++.+
T Consensus 145 ~ta~~~l~~~~~~~~g~~VlV~Ga 168 (342)
T 4eye_A 145 HTMYFAYARRGQLRAGETVLVLGA 168 (342)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESST
T ss_pred HHHHHHHHHhcCCCCCCEEEEECC
Confidence 344555667888999999998865
No 410
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.58 E-value=60 Score=14.68 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 1x2k_A 26 FEEGDIIYITDM 37 (68)
T ss_dssp CCSSCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 589999999864
No 411
>3oxp_A Phosphotransferase enzyme II, A component; structural genomics, center for structural genomics of infec diseases, csgid, pestis CO92; HET: GOL; 1.20A {Yersinia pestis}
Probab=21.58 E-value=1e+02 Score=16.28 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=17.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCC
Q psy255 26 LRDVDTRVAHGIKYGRDRKFLNQ 48 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~~~ 48 (70)
..+-++.++.+.+.+.+.|.+++
T Consensus 20 ~~~~~e~i~~~~~~L~~~g~v~~ 42 (150)
T 3oxp_A 20 AKDWRDAIAISCQPLIDNGAVEA 42 (150)
T ss_dssp CSSHHHHHHHHHHHHHHTTSBCT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCH
Confidence 35677888888888888887764
No 412
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=21.57 E-value=61 Score=14.38 Aligned_cols=12 Identities=25% Similarity=0.410 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (64)
T 2ak5_A 25 FSKGDVIHVTRV 36 (64)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEeEe
Confidence 589999998874
No 413
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=21.55 E-value=1.4e+02 Score=18.40 Aligned_cols=37 Identities=5% Similarity=-0.208 Sum_probs=19.4
Q ss_pred Hhhhcccc--eeeecCCCC-CCHHHHHHHHHHHHHhCCCCC
Q psy255 10 PKQVLIGK--IEPSPADWL-RDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 10 ~r~l~l~~--v~~~~~~~~-~~~~~~~~~a~~~~~~~g~~~ 47 (70)
+++|.+-+ ++-+..+.. ...++.. .+++.+++.|.++
T Consensus 145 L~rLg~dyiDl~~lH~p~~~~~~~e~~-~aL~~l~~~Gkir 184 (353)
T 3erp_A 145 LKRMGLEYVDIFYHHRPDPETPLKETM-KALDHLVRHGKAL 184 (353)
T ss_dssp HHHHTCSCEEEEEECSCCTTSCHHHHH-HHHHHHHHTTSEE
T ss_pred HHHhCCCeEeEEEecCCCCCCCHHHHH-HHHHHHHHCCCcc
Confidence 44555544 333332222 2344443 5778888888764
No 414
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.51 E-value=97 Score=18.36 Aligned_cols=21 Identities=19% Similarity=0.150 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCC
Q psy255 27 RDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 27 ~~~~~~~~~a~~~~~~~g~~~ 47 (70)
.++.+.++.+.+++++.|++|
T Consensus 283 ~~p~~~~~~s~~~l~~~~~~~ 303 (303)
T 3l23_A 283 RTQFAGVKDCADYLIKAPFVK 303 (303)
T ss_dssp CCHHHHHHHHHHHHHHCTTCC
T ss_pred CCHHHHHHHHHHHHHHcCCCC
Confidence 358888999999999999975
No 415
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=21.47 E-value=55 Score=14.98 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=9.8
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 25 ~~~Gd~i~v~~~ 36 (71)
T 2fpf_A 25 LEVDDPLLVELQ 36 (71)
T ss_dssp BCTTCEEEEEEE
T ss_pred CcCCcEEEEeEe
Confidence 589999998754
No 416
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=21.44 E-value=39 Score=16.49 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=13.8
Q ss_pred HhCCCCCCCCeEEEeeccc
Q psy255 41 RDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 41 ~~~g~~~~GD~vv~~~g~~ 59 (70)
-+.| ++.||.++-+-|..
T Consensus 37 ~~aG-l~~GD~Il~VNG~~ 54 (82)
T 1r6j_A 37 ARNG-LLTEHNICEINGQN 54 (82)
T ss_dssp HHHT-CCSSEEEEEETTEE
T ss_pred HHcC-CCCCCEEEEECCEE
Confidence 3458 56999999888874
No 417
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=21.40 E-value=1.4e+02 Score=18.19 Aligned_cols=38 Identities=3% Similarity=-0.189 Sum_probs=20.4
Q ss_pred HHhhhcccc--eeeecCCCC-CCHHHHHHHHHHHHHhCCCCC
Q psy255 9 IPKQVLIGK--IEPSPADWL-RDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 9 ~~r~l~l~~--v~~~~~~~~-~~~~~~~~~a~~~~~~~g~~~ 47 (70)
.+++|.+-+ ++-++.+.. ...++ .-.+++.+++.|.++
T Consensus 111 SL~rLg~dyiDl~~lH~p~~~~~~~e-~~~al~~l~~~Gkir 151 (337)
T 3v0s_A 111 SLKRLDVDYIDLFYIHRIDTTVPIEI-TMGELXXLVEEGKIX 151 (337)
T ss_dssp HHHHHTCSCEEEEEESSCCTTSCHHH-HHHHHHHHHHTTSEE
T ss_pred HHHHhCCCCeeEEEecCCCCCCCHHH-HHHHHHHHHHCCCee
Confidence 345555544 333332222 23344 345788899999865
No 418
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=21.31 E-value=1.4e+02 Score=18.21 Aligned_cols=18 Identities=6% Similarity=-0.044 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHhCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~ 47 (70)
.++. -.+++.+++.|.++
T Consensus 146 ~~e~-~~al~~l~~~Gkir 163 (346)
T 3n6q_A 146 MEET-ASALAHAVQSGKAL 163 (346)
T ss_dssp HHHH-HHHHHHHHHTTSEE
T ss_pred HHHH-HHHHHHHHHcCCee
Confidence 4443 45778888888764
No 419
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=21.28 E-value=1.4e+02 Score=18.26 Aligned_cols=25 Identities=28% Similarity=0.299 Sum_probs=16.1
Q ss_pred HHHHHHHhCCCCCCCCeEEEeecccCC
Q psy255 35 HGIKYGRDRKFLNQGDPVIVVTGWKKG 61 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~~~g~~~~ 61 (70)
+.+.++.+.--+++||.| .+|.+.+
T Consensus 237 ~lIa~lS~~~tL~pGDvI--~TGTP~G 261 (288)
T 4dbf_A 237 EIIEFITASMTLLPGDVI--ATGSPAG 261 (288)
T ss_dssp HHHHHHHTTSCBCTTCEE--ECCCCSC
T ss_pred HHHHHHhCCCCcCCCCEE--EcCCCCC
Confidence 344455556678999976 5676654
No 420
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=21.24 E-value=1.6e+02 Score=18.94 Aligned_cols=29 Identities=14% Similarity=0.075 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 29 VDTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
..+........+.+.|+ ++||+|.+....
T Consensus 46 L~~~~~~lA~~L~~~gv-~~gd~V~i~~~~ 74 (590)
T 3kxw_A 46 LDQHAKAIAATLQAEGA-KPGDRVLLLFAP 74 (590)
T ss_dssp HHHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHcCC-CCCCEEEEEcCC
Confidence 34445555566778885 899999987653
No 421
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=21.22 E-value=1.1e+02 Score=18.80 Aligned_cols=30 Identities=13% Similarity=0.028 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+...++.+++.|+. .+.+|++.+..
T Consensus 190 ~~D~~ig~ll~~L~~~g~~--~nT~vi~tSDH 219 (393)
T 2gso_A 190 AVDAAIGRLLAGMQRDGTR--ARTNIIVVSDH 219 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCG--GGEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCC--CCeEEEEEcCC
Confidence 3566788888999999974 56777666654
No 422
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=21.21 E-value=58 Score=16.24 Aligned_cols=13 Identities=23% Similarity=0.066 Sum_probs=9.8
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
.+++||.|.++.-
T Consensus 71 ~L~dGD~Vei~~~ 83 (87)
T 1tyg_B 71 ELCDRDVIEIVHF 83 (87)
T ss_dssp BCCSSSEEEEEEE
T ss_pred CCCCCCEEEEEcc
Confidence 4788888888753
No 423
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=21.21 E-value=47 Score=16.92 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=12.6
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
| +++||.|+-+-|.+
T Consensus 53 G-L~~GD~Il~InG~~ 67 (111)
T 1vae_A 53 G-AKEGDYIVSIQGVD 67 (111)
T ss_dssp H-CCTTCEEEEETTEE
T ss_pred C-CCCCCEEEEECCEE
Confidence 5 58999999998865
No 424
>3lf6_A Putative phosphotransferase system; epitope-scaffold, immune system; 1.90A {Artificial gene} SCOP: d.112.1.1 PDB: 1xiz_A
Probab=21.17 E-value=1.1e+02 Score=16.52 Aligned_cols=23 Identities=0% Similarity=-0.242 Sum_probs=19.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCC
Q psy255 26 LRDVDTRVAHGIKYGRDRKFLNQ 48 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~~~ 48 (70)
..+-++.++.+.+.+.+.|.+++
T Consensus 25 ~~~~~eai~~~~~~L~~~g~v~~ 47 (161)
T 3lf6_A 25 EVSQNDIIKALASPLINDGMVVS 47 (161)
T ss_dssp TCCHHHHHHHHHHHHHHTTSBCT
T ss_pred CCCHHHHHHHHHHHHHHcCCCcH
Confidence 45778899999999999998864
No 425
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=21.15 E-value=84 Score=15.12 Aligned_cols=25 Identities=8% Similarity=-0.049 Sum_probs=16.8
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHh
Q psy255 18 IEPSPADWLRDVDTRVAHGIKYGRD 42 (70)
Q Consensus 18 v~~~~~~~~~~~~~~~~~a~~~~~~ 42 (70)
+..+...+..+-|+.++.|++.+-+
T Consensus 5 viElvGsS~~S~edAi~nAi~~Ask 29 (68)
T 2cc6_A 5 KVLLTGTSEESFTAAADDAIDRAED 29 (68)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4444455567788888888877653
No 426
>2hd3_A Ethanolamine utilization protein EUTN; beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Escherichia coli} SCOP: b.40.15.1 PDB: 2z9h_A
Probab=21.11 E-value=58 Score=17.00 Aligned_cols=14 Identities=29% Similarity=0.472 Sum_probs=11.8
Q ss_pred CCCCCeEEEeeccc
Q psy255 46 LNQGDPVIVVTGWK 59 (70)
Q Consensus 46 ~~~GD~vv~~~g~~ 59 (70)
+..||.|++++|+.
T Consensus 49 AG~Ge~Vlv~~GSa 62 (103)
T 2hd3_A 49 AGTGEWVLLVSGSS 62 (103)
T ss_dssp CCTTCEEEEEETHH
T ss_pred CCCCCEEEEeCCHH
Confidence 56899999999874
No 427
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=21.09 E-value=84 Score=19.81 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=14.6
Q ss_pred HHHHHHHHhCCCCCCCCeEEEee
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVT 56 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~ 56 (70)
-.+++.+ .|.+++||+|++++
T Consensus 357 pl~L~~~--~~~~~~Gd~vll~g 377 (392)
T 3led_A 357 IIAFHKH--QDDMAQGDLGLICS 377 (392)
T ss_dssp HHHHHHC--CTTCCTTCEEEEEE
T ss_pred HHHHHHH--hCCCCCCCEEEEEE
Confidence 3344443 67899999988775
No 428
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=21.00 E-value=54 Score=17.05 Aligned_cols=17 Identities=18% Similarity=0.388 Sum_probs=13.7
Q ss_pred CCCCCCCCeEEEeeccc
Q psy255 43 RKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 43 ~g~~~~GD~vv~~~g~~ 59 (70)
.|-++.||.|+-+-|..
T Consensus 73 aggL~~GD~Il~Vng~~ 89 (130)
T 1i16_A 73 SETVQPGDEILQLGGTA 89 (130)
T ss_dssp SCCCCTTCCEEECSSCB
T ss_pred cCCCCCCCEEEEECCEE
Confidence 45789999999888764
No 429
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.00 E-value=63 Score=14.86 Aligned_cols=12 Identities=8% Similarity=0.321 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 27 f~~Gd~i~v~~~ 38 (73)
T 2dl7_A 27 FPEGAIIRILNK 38 (73)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 589999999875
No 430
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=20.99 E-value=47 Score=16.40 Aligned_cols=16 Identities=31% Similarity=0.399 Sum_probs=13.0
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
+-+++||.|+-+-|.+
T Consensus 54 agl~~GD~I~~vng~~ 69 (107)
T 2h2b_A 54 GQLQENDRVAMVNGVS 69 (107)
T ss_dssp TTBCTTCEEEEETTEE
T ss_pred hCCCCCCEEEEECCEE
Confidence 3469999999988865
No 431
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.93 E-value=64 Score=14.63 Aligned_cols=12 Identities=8% Similarity=0.158 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (68)
T 1wxb_A 26 VLKDEVLEVLED 37 (68)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 689999999874
No 432
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=20.92 E-value=64 Score=14.88 Aligned_cols=12 Identities=25% Similarity=0.587 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++.-
T Consensus 21 ~~~Gd~i~vl~~ 32 (69)
T 2ydl_A 21 IKEGDIVTLINK 32 (69)
T ss_dssp BCTTCEEEEEES
T ss_pred cCCCCEEEEEEc
Confidence 589999999865
No 433
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=20.91 E-value=64 Score=14.59 Aligned_cols=12 Identities=25% Similarity=0.490 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (70)
T 2cuc_A 26 LQKGEGIRVLGK 37 (70)
T ss_dssp BCTTCEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 689999999875
No 434
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=20.89 E-value=49 Score=16.24 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=12.9
Q ss_pred CCCCCCeEEEeecccC
Q psy255 45 FLNQGDPVIVVTGWKK 60 (70)
Q Consensus 45 ~~~~GD~vv~~~g~~~ 60 (70)
-+++||.|+-+-|.+.
T Consensus 59 gL~~GD~I~~vng~~v 74 (103)
T 1n7t_A 59 LLQPGDKIIQANGYSF 74 (103)
T ss_dssp SCCTTCEEEEETTEEC
T ss_pred CCCCCCEEEEECCEEC
Confidence 4689999999988753
No 435
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=20.87 E-value=65 Score=14.28 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.+.++.-
T Consensus 40 f~~Gd~i~v~~~ 51 (62)
T 1g2b_A 40 MKKGDILTLLNS 51 (62)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEe
Confidence 589999998875
No 436
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=20.86 E-value=1.5e+02 Score=17.92 Aligned_cols=18 Identities=0% Similarity=-0.003 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhCCCCC
Q psy255 29 VDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 29 ~~~~~~~a~~~~~~~g~~~ 47 (70)
.++.+ .+++.+++.|.++
T Consensus 117 ~~e~~-~al~~l~~~Gkir 134 (327)
T 1gve_A 117 IEETL-QACHQLHQEGKFV 134 (327)
T ss_dssp HHHHH-HHHHHHHHTTSEE
T ss_pred HHHHH-HHHHHHHhCCcee
Confidence 44444 4777888888764
No 437
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=20.86 E-value=45 Score=17.27 Aligned_cols=16 Identities=44% Similarity=0.426 Sum_probs=12.7
Q ss_pred CCCCCCCeEEEeeccc
Q psy255 44 KFLNQGDPVIVVTGWK 59 (70)
Q Consensus 44 g~~~~GD~vv~~~g~~ 59 (70)
.-+.+||.|.+-.|..
T Consensus 28 ~~l~~GDiv~v~~G~~ 43 (113)
T 2hc8_A 28 EEVAVGDIVIVRPGEK 43 (113)
T ss_dssp GGCCTTCEEEECTTCB
T ss_pred HHCCCCCEEEECCCCE
Confidence 3478999999988863
No 438
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=20.77 E-value=77 Score=17.65 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=12.5
Q ss_pred CCCCCCCeEEEeecc
Q psy255 44 KFLNQGDPVIVVTGW 58 (70)
Q Consensus 44 g~~~~GD~vv~~~g~ 58 (70)
..+.++|.+|+++.+
T Consensus 85 ~~~~~~DvvI~iS~S 99 (200)
T 1vim_A 85 PRITDQDVLVGISGS 99 (200)
T ss_dssp CCCCTTCEEEEECSS
T ss_pred cCCCCCCEEEEEeCC
Confidence 457899999999876
No 439
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=20.76 E-value=65 Score=14.64 Aligned_cols=12 Identities=25% Similarity=0.324 Sum_probs=10.2
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 27 ~~~Gd~i~v~~~ 38 (68)
T 2k2m_A 27 VKQRDVLEVLDD 38 (68)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 689999999874
No 440
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=20.75 E-value=64 Score=15.03 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=10.0
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 24 ~~~Gd~i~v~~~ 35 (73)
T 2lcs_A 24 LAEGDIVFISYK 35 (73)
T ss_dssp BCTTCEEEEEEE
T ss_pred CcCCCEEEEEEE
Confidence 589999998774
No 441
>3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=20.73 E-value=62 Score=20.90 Aligned_cols=13 Identities=8% Similarity=0.475 Sum_probs=9.6
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+++||.|+.+..+
T Consensus 180 ak~GD~IIgl~Ss 192 (394)
T 3kiz_A 180 IKAGNVIVGFASY 192 (394)
T ss_dssp CCTTCEEEEEESS
T ss_pred CCCCCEEEEECCc
Confidence 5778888877665
No 442
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=20.72 E-value=64 Score=14.87 Aligned_cols=12 Identities=17% Similarity=0.468 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 32 ~~~Gd~i~v~~~ 43 (73)
T 3c0c_A 32 FREGDLITLTNQ 43 (73)
T ss_dssp BCTTCEEEEEEE
T ss_pred CcCCCEEEEEEe
Confidence 589999999874
No 443
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=20.72 E-value=1.8e+02 Score=18.80 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 33 VAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
....+..++++|.+++|...|++++.
T Consensus 158 A~~~i~~A~~~G~l~~g~~~VV~aSs 183 (430)
T 4aec_A 158 GYSMVTDAEQKGFISPGKSVLVEPTS 183 (430)
T ss_dssp HHHHHHHHHHTTSCCTTTCEEEEECS
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECC
Confidence 45556677899999999766665543
No 444
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=20.71 E-value=1.4e+02 Score=18.36 Aligned_cols=38 Identities=0% Similarity=-0.108 Sum_probs=20.6
Q ss_pred HHhhhcccc--eeeecCCCC-CCHHHHHHHHHHHHHhCCCCC
Q psy255 9 IPKQVLIGK--IEPSPADWL-RDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 9 ~~r~l~l~~--v~~~~~~~~-~~~~~~~~~a~~~~~~~g~~~ 47 (70)
.+++|.+-+ ++-++.+.. ...++. -.+++.+++.|.++
T Consensus 143 SL~rLg~dyiDl~~lH~pd~~~~~~e~-~~al~~l~~~Gkir 183 (367)
T 3lut_A 143 SLERLQLEYVDVVFANRPDPNTPMEET-VRAMTHVINQGMAM 183 (367)
T ss_dssp HHHHHTCSCEEEEEESSCCTTSCHHHH-HHHHHHHHHTTSEE
T ss_pred HHHHhCCCccceEEecCCCCCCCHHHH-HHHHHHHHHcCCee
Confidence 345555545 333333222 234443 46788899999864
No 445
>3utk_A Lipoprotein OUTS; nested (perpendicular) alpha-helical hairpins, protein trans pilot protein; 1.65A {Dickeya dadantii} PDB: 3uym_A
Probab=20.69 E-value=1.2e+02 Score=16.64 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=17.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCC
Q psy255 26 LRDVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 26 ~~~~~~~~~~a~~~~~~~g~~~ 47 (70)
..+.+.+...|+.+++++||--
T Consensus 66 iPd~~~I~r~av~~A~~rgWD~ 87 (133)
T 3utk_A 66 LPDDGTILKTAVNVAVQKGWDT 87 (133)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCT
T ss_pred CCcHHHHHHHHHHHHHHcCCCc
Confidence 3456668899999999999843
No 446
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=20.68 E-value=1.7e+02 Score=19.02 Aligned_cols=28 Identities=4% Similarity=-0.012 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
.+.....-..+.+.|+ ++||+|.+....
T Consensus 71 ~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n 98 (563)
T 1amu_A 71 NVKANQLARIFIEKGI-GKDTLVGIMMEK 98 (563)
T ss_dssp HHHHHHHHHHHHHTTC-CTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEeCC
Confidence 3444455566778885 899999987653
No 447
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=20.66 E-value=57 Score=18.56 Aligned_cols=13 Identities=23% Similarity=0.192 Sum_probs=10.1
Q ss_pred CCCCCCeEEEeec
Q psy255 45 FLNQGDPVIVVTG 57 (70)
Q Consensus 45 ~~~~GD~vv~~~g 57 (70)
.+++||.++++..
T Consensus 170 ~L~~GD~Liv~g~ 182 (205)
T 1vct_A 170 KIRAGDVLIGRGT 182 (205)
T ss_dssp BCCTTCEEEEEEC
T ss_pred EECCCCEEEEEEC
Confidence 4688999988764
No 448
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.65 E-value=64 Score=14.81 Aligned_cols=12 Identities=8% Similarity=0.426 Sum_probs=9.9
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 28 ~~~Gd~i~v~~~ 39 (72)
T 2dl8_A 28 FKKGASLLLYQR 39 (72)
T ss_dssp BCTTCEEEEEEE
T ss_pred cCCCCEEEEEee
Confidence 589999998874
No 449
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=20.60 E-value=42 Score=21.67 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCCCCCCeEEE-eec
Q psy255 35 HGIKYGRDRKFLNQGDPVIV-VTG 57 (70)
Q Consensus 35 ~a~~~~~~~g~~~~GD~vv~-~~g 57 (70)
...+.+.+.+++.+||+|++ +||
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SG 27 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSG 27 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCS
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcC
Confidence 35667788999999998765 444
No 450
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.57 E-value=68 Score=17.34 Aligned_cols=13 Identities=23% Similarity=0.146 Sum_probs=11.2
Q ss_pred CCCCCeEEEeecc
Q psy255 46 LNQGDPVIVVTGW 58 (70)
Q Consensus 46 ~~~GD~vv~~~g~ 58 (70)
+.+||.+++++.+
T Consensus 108 ~~~~Dvvi~iS~s 120 (188)
T 1tk9_A 108 GNEKDVLIGISTS 120 (188)
T ss_dssp CCTTCEEEEECSS
T ss_pred CCCCCEEEEEeCC
Confidence 6799999998876
No 451
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.54 E-value=65 Score=14.62 Aligned_cols=12 Identities=8% Similarity=0.426 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~vl~~ 37 (70)
T 2ct4_A 26 MAEGEDLSLMEE 37 (70)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEec
Confidence 689999999864
No 452
>1s99_A YKOF; thiamin-binding protein, ACT-domain family, ligand binding protein; 1.65A {Bacillus subtilis} SCOP: d.58.48.2 PDB: 1sbr_A* 1s7h_A
Probab=20.51 E-value=1.2e+02 Score=17.70 Aligned_cols=20 Identities=5% Similarity=0.076 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHHhCCCCC
Q psy255 28 DVDTRVAHGIKYGRDRKFLN 47 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~ 47 (70)
+.-+.|..+++.+|++|.+.
T Consensus 128 ~ym~~I~~~i~~a~~~g~~~ 147 (200)
T 1s99_A 128 DYMGLIMEAVDIAKAQGTFV 147 (200)
T ss_dssp THHHHHHHHHHHHHHTTCEE
T ss_pred cHHHHHHHHHHHHHHcCccc
Confidence 45577999999999999763
No 453
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=20.50 E-value=72 Score=20.32 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=13.2
Q ss_pred CCCCeEEEeecccCCCCCC
Q psy255 47 NQGDPVIVVTGWKKGAGFT 65 (70)
Q Consensus 47 ~~GD~vv~~~g~~~~~g~t 65 (70)
+.=|.||+++|.+..+|.+
T Consensus 107 ~daDvVVitag~prkpG~t 125 (375)
T 7mdh_A 107 EDVDWALLIGAKPRGPGME 125 (375)
T ss_dssp TTCSEEEECCCCCCCTTCC
T ss_pred CCCCEEEEcCCCCCCCCCC
Confidence 4557888888887666643
No 454
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=20.44 E-value=69 Score=17.55 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=11.5
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
.+.+||.+|+++.+
T Consensus 106 ~~~~~DvvI~iS~S 119 (196)
T 2yva_A 106 LGHAGDVLLAISTR 119 (196)
T ss_dssp HCCTTCEEEEECSS
T ss_pred cCCCCCEEEEEeCC
Confidence 36799999998876
No 455
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=20.39 E-value=1.6e+02 Score=20.81 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCeEEEeeccc
Q psy255 28 DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 59 (70)
Q Consensus 28 ~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~~ 59 (70)
..|..+...++.+++.|+. .+.+||+.+..
T Consensus 295 ~vD~~IG~Ll~~Lk~~GL~--dnT~VI~TSDH 324 (831)
T 3nkq_A 295 EIDKTVGQLMDGLKQLKLH--RCVNVIFVGDH 324 (831)
T ss_dssp HHHHHHHHHHHHHHHTTCT--TTCEEEEEESC
T ss_pred HHHHHHHHHHHHHHhcCCC--CCEEEEEEcCC
Confidence 4577788889999999983 45655555544
No 456
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=20.37 E-value=86 Score=18.78 Aligned_cols=22 Identities=14% Similarity=0.442 Sum_probs=16.3
Q ss_pred HHHHHHhCCCCCCCCeEEEeec
Q psy255 36 GIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 36 a~~~~~~~g~~~~GD~vv~~~g 57 (70)
|...+.+.+-+++||.|+++.+
T Consensus 136 a~~~l~~~~~~~~g~~vlV~Ga 157 (334)
T 3qwb_A 136 ALSFTNEAYHVKKGDYVLLFAA 157 (334)
T ss_dssp HHHHHHTTSCCCTTCEEEESST
T ss_pred HHHHHHHhccCCCCCEEEEECC
Confidence 3444566777899999998874
No 457
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=20.37 E-value=66 Score=14.65 Aligned_cols=11 Identities=27% Similarity=0.591 Sum_probs=9.7
Q ss_pred CCCCCeEEEee
Q psy255 46 LNQGDPVIVVT 56 (70)
Q Consensus 46 ~~~GD~vv~~~ 56 (70)
+++||.|.++.
T Consensus 30 ~~~Gd~i~v~~ 40 (71)
T 1csk_A 30 FCKGDVLTIVA 40 (71)
T ss_dssp BCTTCEEEEEE
T ss_pred CCCCCEEEEeE
Confidence 58999999987
No 458
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=20.37 E-value=47 Score=15.11 Aligned_cols=12 Identities=33% Similarity=0.299 Sum_probs=9.8
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 27 ~~~Gd~i~v~~~ 38 (67)
T 2eyx_A 27 LEVGELVKVTKI 38 (67)
T ss_dssp BCSSEEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 589999998864
No 459
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.33 E-value=65 Score=15.29 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=10.3
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 36 f~~Gd~i~v~~~ 47 (81)
T 1x6g_A 36 FRKGDVVTILEA 47 (81)
T ss_dssp BCTTCEEEEEEC
T ss_pred CCCCCEEEEEec
Confidence 689999999874
No 460
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=20.30 E-value=69 Score=17.62 Aligned_cols=14 Identities=14% Similarity=0.299 Sum_probs=11.6
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
.+++||.+|+++.+
T Consensus 110 ~~~~~DvvI~iS~S 123 (199)
T 1x92_A 110 LGQPGDVLLAISTS 123 (199)
T ss_dssp HCCTTCEEEEECSS
T ss_pred CCCCCCEEEEEeCC
Confidence 36899999998876
No 461
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=20.25 E-value=68 Score=14.74 Aligned_cols=12 Identities=0% Similarity=0.307 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 26 ~~~Gd~i~v~~~ 37 (72)
T 2jw4_A 26 IKKNERLWLLDD 37 (72)
T ss_dssp CCTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 589999999874
No 462
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=20.22 E-value=1.5e+02 Score=17.86 Aligned_cols=15 Identities=7% Similarity=-0.044 Sum_probs=10.8
Q ss_pred HHHHHHHHHhCCCCC
Q psy255 33 VAHGIKYGRDRKFLN 47 (70)
Q Consensus 33 ~~~a~~~~~~~g~~~ 47 (70)
.-.+++.+++.|.++
T Consensus 139 ~~~al~~l~~~Gkir 153 (298)
T 3up8_A 139 RIGALNEVRNAGKVR 153 (298)
T ss_dssp HHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCcc
Confidence 335778888888764
No 463
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=20.15 E-value=67 Score=14.65 Aligned_cols=14 Identities=7% Similarity=0.270 Sum_probs=10.7
Q ss_pred CCCCCCeEEEeecc
Q psy255 45 FLNQGDPVIVVTGW 58 (70)
Q Consensus 45 ~~~~GD~vv~~~g~ 58 (70)
-+++||.|.++...
T Consensus 33 s~~~Gd~i~v~~~~ 46 (73)
T 3h0h_A 33 SFHKGEKFQILNSS 46 (73)
T ss_dssp CBCTTCEEEEEECS
T ss_pred eEeCCCEEEEEEec
Confidence 36899999988643
No 464
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=20.15 E-value=1.1e+02 Score=16.15 Aligned_cols=38 Identities=5% Similarity=-0.138 Sum_probs=27.4
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 18 IEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 18 v~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
+.++-++...++++..+...+.+++.. .||-|+++...
T Consensus 33 ~~aid~~~~~~~~~~~~~i~~~i~~~d---~~~GVLiL~Dm 70 (130)
T 3gx1_A 33 GIALDMPLTVEVKAMYEKLKQTVVKLN---PVKGVLILSDM 70 (130)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHTSC---CTTCEEEEECS
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEeC
Confidence 556656666788888888888777654 68878877654
No 465
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=20.13 E-value=1.8e+02 Score=18.46 Aligned_cols=28 Identities=11% Similarity=0.040 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeecc
Q psy255 30 DTRVAHGIKYGRDRKFLNQGDPVIVVTGW 58 (70)
Q Consensus 30 ~~~~~~a~~~~~~~g~~~~GD~vv~~~g~ 58 (70)
++........+.+.|+ ++||+|.+....
T Consensus 36 ~~~~~~lA~~L~~~g~-~~gd~V~i~~~n 63 (521)
T 3l8c_A 36 KRDSDSIAAFIDSLAL-LAKSPVLVFGAQ 63 (521)
T ss_dssp HHHHHHHHHHHHHTCC-CTTCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEEeCC
Confidence 3445555566778885 799999987654
No 466
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=20.05 E-value=1e+02 Score=18.31 Aligned_cols=23 Identities=13% Similarity=0.023 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeec
Q psy255 34 AHGIKYGRDRKFLNQGDPVIVVTG 57 (70)
Q Consensus 34 ~~a~~~~~~~g~~~~GD~vv~~~g 57 (70)
..|...+ +.+-+++||.|++..+
T Consensus 129 ~ta~~al-~~~~~~~g~~VlV~Ga 151 (315)
T 3goh_A 129 LTAWQAF-EKIPLTKQREVLIVGF 151 (315)
T ss_dssp HHHHHHH-TTSCCCSCCEEEEECC
T ss_pred HHHHHHH-hhcCCCCCCEEEEECC
Confidence 4455555 7778899999998765
No 467
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.01 E-value=63 Score=16.30 Aligned_cols=15 Identities=33% Similarity=0.528 Sum_probs=12.6
Q ss_pred CCCCCeEEEeecccC
Q psy255 46 LNQGDPVIVVTGWKK 60 (70)
Q Consensus 46 ~~~GD~vv~~~g~~~ 60 (70)
+++||.|+-+-|.+.
T Consensus 63 L~~GD~I~~Vng~~v 77 (117)
T 2csj_A 63 LQENDRVVMVNGTPM 77 (117)
T ss_dssp BCTTCEEEEESSCBC
T ss_pred CCCCCEEEEECCEEC
Confidence 689999999988753
No 468
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=20.01 E-value=66 Score=20.96 Aligned_cols=24 Identities=13% Similarity=-0.046 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCC--CCCCCeEEEee
Q psy255 33 VAHGIKYGRDRKF--LNQGDPVIVVT 56 (70)
Q Consensus 33 ~~~a~~~~~~~g~--~~~GD~vv~~~ 56 (70)
+-.++..+.+.|. +++||+|++.+
T Consensus 357 i~l~L~~ll~~~~~~~~~Gdrill~s 382 (478)
T 2p8u_A 357 VYGSLASVLAQYSPQQLAGKRIGVFS 382 (478)
T ss_dssp HHHHHHHHHHHSCHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCccCCCCCEEEEEE
Confidence 4556667777776 77999998765
No 469
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=20.00 E-value=69 Score=14.75 Aligned_cols=12 Identities=0% Similarity=0.307 Sum_probs=10.1
Q ss_pred CCCCCeEEEeec
Q psy255 46 LNQGDPVIVVTG 57 (70)
Q Consensus 46 ~~~GD~vv~~~g 57 (70)
+++||.|.++..
T Consensus 23 f~~Gd~i~vl~~ 34 (67)
T 2b86_A 23 IKKNERLWLLDD 34 (67)
T ss_dssp BCTTCEEEEEEC
T ss_pred cCCCCEEEEEec
Confidence 589999999874
Done!