BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2555
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K010|OPLA_MOUSE 5-oxoprolinase OS=Mus musculus GN=Oplah PE=2 SV=1
Length = 1288
Score = 119 bits (297), Expect = 8e-27, Method: Composition-based stats.
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
FGPDGGLVSNAPHIPVHLG+MQE V+FQI H + G V+LSNHP AGGSHLPDLTVI
Sbjct: 776 FGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVI 835
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF P + PVF+VA+R
Sbjct: 836 TPVF---WPGQSRPVFYVASR 853
>sp|P97608|OPLA_RAT 5-oxoprolinase OS=Rattus norvegicus GN=Oplah PE=1 SV=2
Length = 1288
Score = 118 bits (296), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
FGPDGGLVSNAPHIPVHLG+MQE V+FQI H + G V+LSNHP AGGSHLPDLTVI
Sbjct: 776 FGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVI 835
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF P + PVF+VA+R
Sbjct: 836 TPVF---WPGQTRPVFYVASR 853
>sp|O14841|OPLA_HUMAN 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3
Length = 1288
Score = 118 bits (295), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
FGPDGGLVSNAPHIPVHLG+MQE V+FQI H + G V+LSNHP AGGSHLPDLTVI
Sbjct: 776 FGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVI 835
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF P + PVF+VA+R
Sbjct: 836 TPVF---WPGQTRPVFYVASR 853
>sp|Q75WB5|OPLA_BOVIN 5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1
Length = 1288
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
FGPDGGLVSN PHIPVHLG+MQE V+FQI + G V+LSNHP AGGSHLPDLTVI
Sbjct: 776 FGPDGGLVSNVPHIPVHLGAMQETVQFQIQQLGADLHPGDVLLSNHPSAGGSHLPDLTVI 835
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF P + PVF+VA+R
Sbjct: 836 TPVF---WPGQTRPVFYVASR 853
>sp|Q54NW6|OPLA_DICDI 5-oxoprolinase OS=Dictyostelium discoideum GN=oplah PE=3 SV=2
Length = 1265
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
F PDGGLV+NAP IP+H+GSMQ AVK+Q++ N+K+G V+LSNHP+AGGSHLPDLTV+
Sbjct: 790 FSPDGGLVANAPAIPIHVGSMQNAVKYQVETLGSNWKEGEVVLSNHPQAGGSHLPDLTVM 849
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPV+ + VFFVA+R
Sbjct: 850 TPVYHKGE-----IVFFVASR 865
>sp|Q9FIZ7|OPLA_ARATH 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1
Length = 1266
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
F PDGGLV+NAPH+PVHLG+M V++Q+ H N +G V+++NHP AGGSHLPD+TVI
Sbjct: 778 FSPDGGLVANAPHVPVHLGAMSSTVRWQLKHWGENLNEGDVLVTNHPCAGGSHLPDITVI 837
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF + VFFVA+R
Sbjct: 838 TPVFDKGK-----LVFFVASR 853
>sp|Q10093|YAOE_SCHPO Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1
Length = 1260
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
F PDGGLV+NAPH+P LGSMQ AVK+Q ++ KG G V+LSNHP AGG HLPDLTV+
Sbjct: 772 FSPDGGLVANAPHVPAMLGSMQTAVKWQHNYWKGKLVPGDVLLSNHPIAGGVHLPDLTVV 831
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TPVF +++ + +F+ A R
Sbjct: 832 TPVFDNNKDI----IFYCAAR 848
>sp|P28273|OPLA_YEAST 5-oxoprolinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=OXP1 PE=1 SV=2
Length = 1286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
F G LV+NAPH+PVHLGSM + Q +G K G V+++NHP GG+HLPD+TVI
Sbjct: 789 FDSKGNLVANAPHVPVHLGSMSTCISAQAKLWEGKLKPGDVLITNHPDIGGTHLPDITVI 848
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
TP F + + +F+VA+R
Sbjct: 849 TPSFSSTGEL----IFYVASR 865
>sp|Q10094|YAOF_SCHPO Uncharacterized protein C11D3.15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC11D3.15 PE=3 SV=1
Length = 1317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 10 FGPDGGLVSNAPHIPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVI 69
F G LV+NAPH+PVHLGSM V+ Q +G K G V+++NHP GG+HLPD+T I
Sbjct: 791 FDAKGNLVANAPHMPVHLGSMSTCVRTQAKIHEGKLKPGDVLVTNHPSYGGTHLPDITTI 850
Query: 70 TPVFIDSQPVEEGP--VFFVANR 90
TP F EG +F+VA R
Sbjct: 851 TPHF-------EGDEIMFYVAAR 866
>sp|Q58373|Y963_METJA Uncharacterized protein MJ0963 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0963 PE=3 SV=1
Length = 563
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 13 DGGLVSNAPHIPVHLGSMQEAVKFQIDHRKG---NFKKGSVILSNHPKAGGSHLPDLTVI 69
+G L++ A HIPVHLGSM VK +D+ K +K VI+ N P G+HL D+T++
Sbjct: 47 NGELIAQAEHIPVHLGSMAIGVKNTVDYLKKESIEIEKDDVIIVNDPYIAGTHLNDITLL 106
Query: 70 TPVFIDSQPVEEGPVFFVANR 90
P+F + + + +VAN+
Sbjct: 107 KPIFYNDEIIG-----YVANK 122
>sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomonas sp. (strain NS671)
GN=hyuB PE=3 SV=1
Length = 592
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 23 IPVHLGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVITPVF 73
IP ++ ++E ++ R F +G VI+ N P G SH PD+ PVF
Sbjct: 75 IPGYIKGIREI----MEDRNDTFNQGDVIMHNSPYHGASHGPDVGFCIPVF 121
>sp|H2A0M0|NRP_PINMG Asparagine-rich protein OS=Pinctada margaritifera PE=1 SV=1
Length = 686
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 27 LGSMQEAVKFQIDHRKGNFKKGSVILSNHPKAGGSHLPDLTVITPVFIDSQPVEEGPVFF 86
LG + K ++ N K + +L N+P+ GGS +P VI ++ P + P +F
Sbjct: 51 LGDVNAGSKLSEPPKRRNTDKTARMLENNPRIGGSLIPPPGVI----MEPNPYDINPPYF 106
Query: 87 VANR 90
V+N+
Sbjct: 107 VSNK 110
>sp|Q2S560|COAX_SALRD Type III pantothenate kinase OS=Salinibacter ruber (strain DSM
13855 / M31) GN=coaX PE=3 SV=1
Length = 256
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 33 AVKFQIDHRKGNFKKGS-----VILSNHPKAGGSHLPDLTVITPVFIDSQPV 79
AV +++ HR G ++ G+ V++ N +AG + LPD+ P+ + PV
Sbjct: 134 AVNYEVVHRTGTYRGGAIGPGAVLMRNALQAGTAQLPDV----PLHLPETPV 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,580,683
Number of Sequences: 539616
Number of extensions: 1338930
Number of successful extensions: 2225
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2213
Number of HSP's gapped (non-prelim): 15
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)