Query psy2558
Match_columns 348
No_of_seqs 275 out of 1804
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 19:18:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj3_A Cathepsin L-like protei 100.0 1.4E-86 4.7E-91 625.4 30.7 306 31-348 11-331 (331)
2 3qt4_A Cathepsin-L-like midgut 100.0 1.8E-85 6.2E-90 616.4 28.8 301 33-348 18-329 (329)
3 1by8_A Protein (procathepsin K 100.0 3.1E-84 1E-88 606.2 28.6 300 37-348 6-314 (314)
4 2c0y_A Procathepsin S; proenzy 100.0 6.3E-84 2.1E-88 604.3 28.3 299 37-348 7-315 (315)
5 1cs8_A Human procathepsin L; p 100.0 9.5E-84 3.2E-88 603.3 29.0 300 38-348 8-316 (316)
6 3tnx_A Papain; hydrolase, cyto 100.0 7E-83 2.4E-87 603.5 32.0 292 35-347 59-361 (363)
7 2o6x_A Procathepsin L1, secret 100.0 1.2E-83 4.2E-88 601.1 25.4 293 39-348 2-306 (310)
8 1pci_A Procaricain; zymogen, h 100.0 1.3E-82 4.4E-87 596.7 29.8 297 35-348 15-321 (322)
9 1xkg_A DER P I, major mite fec 100.0 1.8E-80 6E-85 579.0 25.5 284 41-348 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.1E-72 3.8E-77 546.9 22.8 281 57-347 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.9E-71 1.7E-75 518.5 16.9 271 60-347 2-311 (325)
12 1m6d_A Cathepsin F, catsf; pap 100.0 1.6E-67 5.5E-72 468.7 21.2 213 126-348 1-213 (214)
13 3i06_A Cruzipain; autocatalyti 100.0 7.2E-67 2.5E-71 464.8 24.2 211 126-348 1-214 (215)
14 3kwz_A Cathepsin K; enzyme inh 100.0 5.9E-67 2E-71 465.8 23.0 211 126-348 1-215 (215)
15 3pbh_A Procathepsin B; thiol p 100.0 8.2E-67 2.8E-71 488.9 19.7 260 69-347 11-313 (317)
16 2xu3_A Cathepsin L1; hydrolase 100.0 5.8E-66 2E-70 460.7 23.6 214 126-348 1-220 (220)
17 3ovx_A Cathepsin S; hydrolase, 100.0 4.9E-66 1.7E-70 460.7 22.0 210 126-348 2-218 (218)
18 8pch_A Cathepsin H; hydrolase, 100.0 3.2E-66 1.1E-70 462.6 20.3 212 126-347 1-217 (220)
19 3f5v_A DER P 1 allergen; aller 100.0 7.3E-66 2.5E-70 460.8 20.4 210 124-348 8-222 (222)
20 2b1m_A SPE31; papain-like, sug 100.0 3.2E-65 1.1E-69 462.5 22.5 212 125-348 1-224 (246)
21 1cqd_A Protein (protease II); 100.0 3.5E-65 1.2E-69 455.7 22.2 209 125-348 2-217 (221)
22 1iwd_A Ervatamin B; cysteine p 100.0 4.5E-65 1.5E-69 453.0 22.4 207 126-348 1-214 (215)
23 1ppo_A Protease omega; hydrola 100.0 4.7E-65 1.6E-69 453.3 22.3 207 126-348 1-215 (216)
24 3u8e_A Papain-like cysteine pr 100.0 2.1E-65 7.2E-70 457.6 19.9 211 126-348 1-219 (222)
25 3p5u_A Actinidin; SAD, cystein 100.0 5.3E-65 1.8E-69 454.5 20.8 208 126-348 1-217 (220)
26 1yal_A Chymopapain; hydrolase, 100.0 8.9E-65 3E-69 452.2 21.7 207 126-348 1-215 (218)
27 2cio_A Papain; hydrolase/inhib 100.0 3.7E-64 1.2E-68 446.3 23.2 203 126-348 1-211 (212)
28 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.9E-64 1E-68 447.4 22.3 204 126-348 1-211 (213)
29 1o0e_A Ervatamin C; plant cyst 100.0 4.6E-64 1.6E-68 444.3 23.3 202 126-348 1-207 (208)
30 2bdz_A Mexicain; cysteine prot 100.0 6.2E-64 2.1E-68 445.3 23.8 203 126-348 1-211 (214)
31 3f75_A Toxopain-2, cathepsin L 100.0 1.1E-64 3.6E-69 454.0 17.3 213 123-348 4-224 (224)
32 1s4v_A Cysteine endopeptidase; 100.0 8.6E-64 3E-68 448.9 21.6 210 125-348 1-219 (229)
33 2oul_A Falcipain 2; cysteine p 100.0 5.5E-64 1.9E-68 453.5 20.5 215 123-348 15-240 (241)
34 2fo5_A Cysteine proteinase EP- 100.0 8.2E-64 2.8E-68 456.0 21.5 210 125-348 3-224 (262)
35 3bwk_A Cysteine protease falci 100.0 8E-64 2.7E-68 453.0 19.8 215 123-348 17-242 (243)
36 3cbj_A Cathepsin B; cathepsin 100.0 3.4E-61 1.2E-65 441.5 18.2 210 124-347 5-256 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 8.5E-61 2.9E-65 436.2 19.4 209 125-347 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 3.6E-60 1.2E-64 436.4 18.9 209 123-347 33-274 (277)
39 2wbf_X Serine-repeat antigen p 100.0 1.6E-55 5.5E-60 404.1 19.6 210 128-346 9-256 (265)
40 3ois_A Cysteine protease; alph 100.0 6.7E-54 2.3E-58 397.8 14.7 229 87-334 17-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 2.2E-43 7.6E-48 339.7 14.0 208 126-347 48-422 (453)
42 2e01_A Cysteine proteinase 1; 100.0 5.6E-42 1.9E-46 330.3 16.8 208 126-347 53-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.6E-36 5.5E-41 286.4 16.6 188 138-333 22-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.1E-18 7.1E-23 134.1 8.7 74 35-109 18-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.2E-17 4E-22 124.1 7.0 67 39-107 7-76 (80)
46 1pxv_A Cysteine protease; hydr 97.7 0.00075 2.6E-08 55.8 13.6 132 142-335 25-164 (183)
47 1x9y_A Cysteine proteinase; ha 97.3 0.0031 1.1E-07 57.6 12.5 131 142-334 201-339 (367)
48 1cv8_A Staphopain; cysteine pr 97.2 0.0054 1.8E-07 50.6 12.3 122 142-320 16-145 (174)
49 3erv_A Putative C39-like pepti 85.7 2.1 7.2E-05 37.4 7.3 51 239-299 126-187 (236)
50 1dki_A Pyrogenic exotoxin B zy 67.7 12 0.00042 34.8 7.2 54 245-331 290-343 (371)
51 3bb7_A Interpain A; cysteine p 67.5 12 0.0004 34.2 6.9 59 245-331 239-297 (321)
52 4d8b_A Streptopain; papain fol 58.0 17 0.00057 32.1 5.8 54 245-331 172-225 (261)
53 2r9f_A Calpain-1 catalytic sub 27.9 1.3E+02 0.0045 27.2 7.0 72 245-331 211-312 (339)
No 1
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.4e-86 Score=625.43 Aligned_cols=306 Identities=33% Similarity=0.629 Sum_probs=268.9
Q ss_pred cCccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCCcccc--ccCcCCCCCHHHHHhhhhccc
Q psy2558 31 HHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHGSGVY--GLNEFSDLSTAEFQAKYLGFK 107 (348)
Q Consensus 31 ~~~~~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~~~~~--g~N~FsDlt~~Ef~~~~~~~~ 107 (348)
+++.+..++.+|++||++|+|+|.+.+|+.+|++||++|+++|++||+. +.+..+| |+|+|+|||.|||++++++.+
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3445667889999999999999998899999999999999999999953 3344455 999999999999999888755
Q ss_pred cCCCC-C-C-CCCCCC----CCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCHHHh
Q psy2558 108 LKPSY-A-D-RSVPAM----IPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKK--LVSLSEQEL 178 (348)
Q Consensus 108 ~~~~~-~-~-~~~~~~----~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l 178 (348)
..+.. . . ...... ....+||++||||++|+||||||||.||||||||++++||++++++++. ++.||+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L 170 (331)
T 3qj3_A 91 MPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL 170 (331)
T ss_dssp CCSSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred ccccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence 43211 0 0 001000 0234799999999999999999999999999999999999999999998 999999999
Q ss_pred hhccCCCCCCCCCChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCE
Q psy2558 179 IDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPM 257 (348)
Q Consensus 179 ~dc~~~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv 257 (348)
+||+..+.||+||++..|++|+.++ +||++|++|||.+..+.|...+....+++.+|..++. ++++||++|+++|||
T Consensus 171 vdC~~~~~GC~GG~~~~a~~yi~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV 248 (331)
T 3qj3_A 171 VDCVPNALGCSGGWMNDAFTYVAQN--GGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPV 248 (331)
T ss_dssp HHHCTTSCGGGCCCHHHHHHHHHHH--TCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCE
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHc--CCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCE
Confidence 9999878999999999999999988 7999999999999999999887778889999999987 899999999999999
Q ss_pred EEEEEcC-cCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-C
Q psy2558 258 AVAINAY-ALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-G 335 (348)
Q Consensus 258 ~v~~~~~-~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~ 335 (348)
+|+|++. .|++|++|||..+ .| +...++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |
T Consensus 249 ~v~i~a~~~f~~Y~~Gvy~~~--~c--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n 318 (331)
T 3qj3_A 249 AVAFDADDPFGSYSGGVYYNP--TC--ETNKFTHAVLIVGYGN------ENGQDYWLVKNSWGDGWGLDGYFKIARNANN 318 (331)
T ss_dssp EEEECCCTTGGGEEEEEECCT--TC--CSSCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSSS
T ss_pred EEEEEcccccccccCceEeCC--CC--CCCcCCEEEEEEEEec------cCCceEEEEEcCCCCCcCCCCEEEEEcCCCC
Confidence 9999994 5999999999985 68 3567899999999998 77999999999999999999999999998 9
Q ss_pred eeccCCceeEeeC
Q psy2558 336 SCGINDYVRSALV 348 (348)
Q Consensus 336 ~cgi~~~~~~~~~ 348 (348)
.|||+++++||+|
T Consensus 319 ~CgI~~~~~~p~v 331 (331)
T 3qj3_A 319 HCGIAGVASVPTL 331 (331)
T ss_dssp GGGTTTSCEEEEC
T ss_pred ccCcCCceeeeeC
Confidence 9999999999986
No 2
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.8e-85 Score=616.38 Aligned_cols=301 Identities=38% Similarity=0.697 Sum_probs=263.1
Q ss_pred ccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCC--ccccccCcCCCCCHHHHHhhhhccccC
Q psy2558 33 LHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHG--SGVYGLNEFSDLSTAEFQAKYLGFKLK 109 (348)
Q Consensus 33 ~~~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~--~~~~g~N~FsDlt~~Ef~~~~~~~~~~ 109 (348)
+.+..+..+|++||++|+|+|.+.+|+.+|++||++|+++|++||+. +.+ +.++|+|+|+|||.|||++ +++.++.
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 44566788999999999999988889999999999999999999953 233 3445999999999999999 7765532
Q ss_pred CCC-CC--CCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--C
Q psy2558 110 PSY-AD--RSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--E 184 (348)
Q Consensus 110 ~~~-~~--~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~ 184 (348)
+.. .. ..........+||++||||++ +||||||||.||||||||++++||+++++++++++.||||+|+||+. .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g 175 (329)
T 3qt4_A 97 QKPKHPENLRMPYVSSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYG 175 (329)
T ss_dssp C------CCEEECCCCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred ccccccccccccccCCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccC
Confidence 111 10 000000112479999999999 99999999999999999999999999999999999999999999985 4
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc
Q psy2558 185 DDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA 263 (348)
Q Consensus 185 ~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~ 263 (348)
+.||+||++..|++|+.++ ||++|++|||.+..+.|........+++.+|..++. ++++||++|+++|||+|+|++
T Consensus 176 ~~GC~GG~~~~a~~yi~~~---Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a 252 (329)
T 3qt4_A 176 NAGCDGGWMDSAFSYIHDY---GIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDA 252 (329)
T ss_dssp CCTTBCCCHHHHHHHHHHS---CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCChhHHHHHHHHc---CCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEec
Confidence 7899999999999999999 999999999999999999877777789999999986 899999999999999999999
Q ss_pred C-cCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCC
Q psy2558 264 Y-ALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGIND 341 (348)
Q Consensus 264 ~-~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~ 341 (348)
. +|++|++|||..+ .| +...++|||+|||||+ ++|++|||||||||++||++|||||+|+. |.|||++
T Consensus 253 ~~~f~~Y~~GVy~~~--~c--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~ 322 (329)
T 3qt4_A 253 TDELQFYSGGLFYDQ--TC--NQSDLNHGVLVVGYGS------DNGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIAT 322 (329)
T ss_dssp CGGGTTEEEEEECCS--SC--CSSCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTT
T ss_pred ChhhhhccCceeecC--CC--CCCcCCEEEEEEEEEe------eCCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCC
Confidence 5 8999999999986 68 3567899999999998 67999999999999999999999999998 9999999
Q ss_pred ceeEeeC
Q psy2558 342 YVRSALV 348 (348)
Q Consensus 342 ~~~~~~~ 348 (348)
+++||+|
T Consensus 323 ~~~yp~v 329 (329)
T 3qt4_A 323 AASYPAL 329 (329)
T ss_dssp TCEEEEC
T ss_pred ceeEeeC
Confidence 9999986
No 3
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=3.1e-84 Score=606.16 Aligned_cols=300 Identities=35% Similarity=0.647 Sum_probs=260.9
Q ss_pred hHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CC--CccccccCcCCCCCHHHHHhhhhccccCCCC-
Q psy2558 37 KHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EH--GSGVYGLNEFSDLSTAEFQAKYLGFKLKPSY- 112 (348)
Q Consensus 37 ~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~--~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~- 112 (348)
.++.+|++||++|+|+|.+.+|+.+|+.+|++|+++|++||+. +. .++++|+|+|+|||.+||++.+++.......
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccc
Confidence 4567899999999999988899999999999999999999953 22 3455599999999999999877765432211
Q ss_pred CCCCCCCCCCCCC-CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCC
Q psy2558 113 ADRSVPAMIPNIT-LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGG 191 (348)
Q Consensus 113 ~~~~~~~~~~~~~-lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG 191 (348)
............+ ||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||
T Consensus 86 ~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~gC~GG 165 (314)
T 1by8_A 86 RSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGG 165 (314)
T ss_dssp CSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTSCGGGCC
T ss_pred cCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCcCC
Confidence 0100110111224 899999999999999999999999999999999999999999999999999999999778999999
Q ss_pred ChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCcc
Q psy2558 192 SISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQF 268 (348)
Q Consensus 192 ~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~ 268 (348)
++..|++|+.++ +||++|++|||.+..+.|...+....+++.+|..++. ++++||++|+++|||+|+|++. +|++
T Consensus 166 ~~~~a~~yi~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~ 243 (314)
T 1by8_A 166 YMTNAFQYVQKN--RGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 243 (314)
T ss_dssp CSHHHHHHHHHT--TCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHT
T ss_pred CHHHHHHHHHHc--CCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhh
Confidence 999999999854 4999999999999999999776656688999999986 8999999999999999999995 7999
Q ss_pred ccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEee
Q psy2558 269 YVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSAL 347 (348)
Q Consensus 269 y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~~ 347 (348)
|++|||..+ .| +...++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 244 Y~~Gvy~~~--~c--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~ 313 (314)
T 1by8_A 244 YSKGVYYDE--SC--NSDNLNHAVLAVGYGI------QKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPK 313 (314)
T ss_dssp EEEECBCCT--TC--CSSCCCEEEEEEEEEE------ETTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEEC
T ss_pred ccCceecCC--CC--CCCCCCeEEEEEEEec------cCCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEee
Confidence 999999875 58 3457899999999998 67899999999999999999999999995 9999999999998
Q ss_pred C
Q psy2558 348 V 348 (348)
Q Consensus 348 ~ 348 (348)
+
T Consensus 314 ~ 314 (314)
T 1by8_A 314 M 314 (314)
T ss_dssp C
T ss_pred C
Confidence 6
No 4
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=6.3e-84 Score=604.31 Aligned_cols=299 Identities=32% Similarity=0.617 Sum_probs=258.9
Q ss_pred hHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCC--ccccccCcCCCCCHHHHHhhhhccccCCCCC
Q psy2558 37 KHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHG--SGVYGLNEFSDLSTAEFQAKYLGFKLKPSYA 113 (348)
Q Consensus 37 ~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~--~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~~ 113 (348)
.++.+|++||++|+|+|.+.+|+.+|+.+|++|+++|++||+. +.+ ++++|+|+|+|||.+||++.+++.+......
T Consensus 7 ~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 86 (315)
T 2c0y_A 7 TLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQ 86 (315)
T ss_dssp GGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcccc
Confidence 4577899999999999988889999999999999999999953 223 4555999999999999998877654321110
Q ss_pred CCCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhcc-C--CCCCCCC
Q psy2558 114 DRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCD-Q--EDDGCEG 190 (348)
Q Consensus 114 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~-~--~~~gc~G 190 (348)
...........+||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+ . .+.||+|
T Consensus 87 ~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~G 166 (315)
T 2c0y_A 87 RNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNG 166 (315)
T ss_dssp SCBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGC
T ss_pred CCccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCC
Confidence 000000111246899999999999999999999999999999999999999999999999999999998 3 4889999
Q ss_pred CChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCc
Q psy2558 191 GSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQ 267 (348)
Q Consensus 191 G~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~ 267 (348)
|++..|++|+.++ +||++|++|||.+..+.|...+....+++.+|..++. ++++||++|+++|||+|+|++. +|+
T Consensus 167 G~~~~a~~yi~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~ 244 (315)
T 2c0y_A 167 GFMTTAFQYIIDN--KGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFF 244 (315)
T ss_dssp BCHHHHHHHHHHH--TCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHH
T ss_pred CCHHHHHHHHHHh--CCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhh
Confidence 9999999999964 4999999999999999999776666788999999986 8999999999999999999994 799
Q ss_pred cccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEe
Q psy2558 268 FYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSA 346 (348)
Q Consensus 268 ~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~ 346 (348)
+|++|||..+ .|. . .++|||+|||||+ ++|++|||||||||++||++|||||+|+. |.|||+++++||
T Consensus 245 ~Y~~Gvy~~~--~c~--~-~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p 313 (315)
T 2c0y_A 245 LYRSGVYYEP--SCT--Q-NVNHGVLVVGYGD------LNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYP 313 (315)
T ss_dssp TEEEEEECCT--TCC--S-CCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred ccCCCcccCC--CCC--C-cCCEEEEEEEEee------cCCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEe
Confidence 9999999875 583 3 7899999999998 67899999999999999999999999995 999999999999
Q ss_pred eC
Q psy2558 347 LV 348 (348)
Q Consensus 347 ~~ 348 (348)
++
T Consensus 314 ~~ 315 (315)
T 2c0y_A 314 EI 315 (315)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 5
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=9.5e-84 Score=603.34 Aligned_cols=300 Identities=35% Similarity=0.680 Sum_probs=259.5
Q ss_pred HHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-C--CCccccccCcCCCCCHHHHHhhhhccccCCCCCC
Q psy2558 38 HTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-E--HGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYAD 114 (348)
Q Consensus 38 ~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~--~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~~~ 114 (348)
++.+|++||++|+|+| +.+|+.+|+.||++|+++|++||+. . ..++++|+|+|+|||.+||++++++.++......
T Consensus 8 ~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~ 86 (316)
T 1cs8_A 8 LEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKG 86 (316)
T ss_dssp GHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSCC
T ss_pred HHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccccC
Confidence 5778999999999999 8889999999999999999999953 2 2345569999999999999988776543321110
Q ss_pred CCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCCCCC
Q psy2558 115 RSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCEGGS 192 (348)
Q Consensus 115 ~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~GG~ 192 (348)
. ........+||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+. .+.||+||+
T Consensus 87 ~-~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~ 165 (316)
T 1cs8_A 87 K-VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGL 165 (316)
T ss_dssp E-ECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBC
T ss_pred c-cccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCC
Confidence 0 0001123468999999999999999999999999999999999999999999999999999999984 478999999
Q ss_pred hHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcC--cCcccc
Q psy2558 193 ISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAY--ALQFYV 270 (348)
Q Consensus 193 ~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~--~f~~y~ 270 (348)
+..|++|+.++ +||++|++|||.+..+.|...+....+++.+|..++.++++||++|+++|||+|+|++. +|++|+
T Consensus 166 ~~~a~~yi~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~ 243 (316)
T 1cs8_A 166 MDYAFQYVQDN--GGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYK 243 (316)
T ss_dssp HHHHHHHHHHH--TCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTEE
T ss_pred HHHHHHHHHHh--CCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCChhhcccc
Confidence 99999999744 39999999999999999998766677889999999878999999999999999999994 799999
Q ss_pred CceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCC-CCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEeeC
Q psy2558 271 TGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTH-KAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSALV 348 (348)
Q Consensus 271 ~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~~~ 348 (348)
+|||..+ .| +...++|||+|||||++.. + +|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 244 ~Gvy~~~--~c--~~~~~~HaV~iVGygd~~~---~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 244 EGIYFEP--DC--SSEDMDHGVLVVGYGFEST---ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp EEEECCT--TC--CSSCCCEEEEEEEEEEECC---SSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred CceECCC--CC--CCCCCCEEEEEEEecCCcc---cCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 9999875 58 3457899999999993110 4 7899999999999999999999999997 89999999999986
No 6
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=7e-83 Score=603.51 Aligned_cols=292 Identities=36% Similarity=0.627 Sum_probs=251.7
Q ss_pred chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccCCCC--
Q psy2558 35 HVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSY-- 112 (348)
Q Consensus 35 ~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~-- 112 (348)
+..+.++|++||++|+|+|.+.+|+.+|++||++|+++|++||+. ..++++|+|+|+|||.|||++++++.......
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~ 137 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT 137 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence 456789999999999999999999999999999999999999974 34556699999999999999998876543211
Q ss_pred CCCC-CCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCC
Q psy2558 113 ADRS-VPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGG 191 (348)
Q Consensus 113 ~~~~-~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG 191 (348)
.... ........+||++||||++|+||||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||
T Consensus 138 ~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~~~GC~GG 217 (363)
T 3tnx_A 138 ELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRRSYGCNGG 217 (363)
T ss_dssp SSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCC
T ss_pred ccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCCCCCCCCC
Confidence 1111 111123457999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred ChHHHHHHHHHhcCCCccCCCcccccCCCCccccccc-cceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc--CcCc
Q psy2558 192 SISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA--YALQ 267 (348)
Q Consensus 192 ~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~-~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~--~~f~ 267 (348)
++..|+.|+.++ ||++|++|||.+..+.|..... .....+.++..++. ++..++.+|+ +|||+|++++ .+|+
T Consensus 218 ~~~~a~~yi~~~---Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~-~gPvsvai~a~~~~F~ 293 (363)
T 3tnx_A 218 YPWSALQLVAQY---GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIA-NQPVSVVLEAAGKDFQ 293 (363)
T ss_dssp CHHHHHHHHHHT---CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHT-TSCEEEEECCCSHHHH
T ss_pred ChHHHHhHHHhc---CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHH-cCCcEEEEEecchhhh
Confidence 999999999988 9999999999998887765433 34456777877776 7777777775 6999999998 3799
Q ss_pred cccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCce
Q psy2558 268 FYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYV 343 (348)
Q Consensus 268 ~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~ 343 (348)
+|++|||.. .| ...+||||+|||||+ +|||||||||++|||+|||||+||. |+|||++++
T Consensus 294 ~Y~sGVy~~---~~---~~~lnHaV~iVGyG~----------~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a 357 (363)
T 3tnx_A 294 LYRGGIFVG---PC---GNKVDHAVAAVGYGP----------NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSS 357 (363)
T ss_dssp TEEEEEECC---CC---CSCCCEEEEEEEEET----------TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCE
T ss_pred CCCCCEECC---CC---CCCCCeEEEEEEcCC----------CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCcccee
Confidence 999999987 36 345799999999997 5999999999999999999999987 459999999
Q ss_pred eEee
Q psy2558 344 RSAL 347 (348)
Q Consensus 344 ~~~~ 347 (348)
+|||
T Consensus 358 ~yPi 361 (363)
T 3tnx_A 358 FYPV 361 (363)
T ss_dssp EEEE
T ss_pred eecc
Confidence 9998
No 7
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.2e-83 Score=601.06 Aligned_cols=293 Identities=37% Similarity=0.693 Sum_probs=255.3
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccC---CCccccccCcCCCCCHHHHHhhhhc-cccCCCC--
Q psy2558 39 TALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTE---HGSGVYGLNEFSDLSTAEFQAKYLG-FKLKPSY-- 112 (348)
Q Consensus 39 ~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~---~~~~~~g~N~FsDlt~~Ef~~~~~~-~~~~~~~-- 112 (348)
+.+|++||++|+|+|.+.+|+.+| .+|++|+++|++||+.. ..++++|+|+|+|||.+||++++++ .+.....
T Consensus 2 ~~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~ 80 (310)
T 2o6x_A 2 DDLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS 80 (310)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC
T ss_pred hHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc
Confidence 357999999999999878899999 99999999999999631 2345569999999999999987776 4322110
Q ss_pred C-CCCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCC
Q psy2558 113 A-DRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCE 189 (348)
Q Consensus 113 ~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~ 189 (348)
. ..... ...+||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+. .+.||+
T Consensus 81 ~~~~~~~---~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 81 HGVPYEA---NNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp SSEECCC-------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred cCCcccc---ccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 0 01111 12369999999999999999999999999999999999999999999999999999999984 478999
Q ss_pred CCChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC-cCc
Q psy2558 190 GGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY-ALQ 267 (348)
Q Consensus 190 GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~-~f~ 267 (348)
||++..|++|+.+. ||++|++|||.+..+.|........+++.+|..++. ++++||++|+++|||+|+|++. +|+
T Consensus 158 GG~~~~a~~yi~~~---Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~ 234 (310)
T 2o6x_A 158 GGLMENAYQYLKQF---GLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFM 234 (310)
T ss_dssp CCCHHHHHHHHTTS---CBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHH
T ss_pred CCCHHHHHHHHHHC---CcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhh
Confidence 99999999999855 999999999999999999776666789999999986 8999999999999999999995 899
Q ss_pred cccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEe
Q psy2558 268 FYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSA 346 (348)
Q Consensus 268 ~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~ 346 (348)
+|++|||..+ .| +...++|||+|||||+ ++|++|||||||||++||++|||||+|+. |.|||+++++||
T Consensus 235 ~Y~~Gvy~~~--~c--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p 304 (310)
T 2o6x_A 235 MYRSGIYQSQ--TC--SPLRVNHAVLAVGYGT------QGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLP 304 (310)
T ss_dssp TEEEEEECCS--SC--CTTCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEE
T ss_pred hCCCceecCC--CC--CCCCCCEEEEEEEEec------cCCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEE
Confidence 9999999875 58 3457899999999998 67899999999999999999999999998 899999999999
Q ss_pred eC
Q psy2558 347 LV 348 (348)
Q Consensus 347 ~~ 348 (348)
++
T Consensus 305 ~~ 306 (310)
T 2o6x_A 305 MV 306 (310)
T ss_dssp EE
T ss_pred Ee
Confidence 84
No 8
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-82 Score=596.72 Aligned_cols=297 Identities=35% Similarity=0.633 Sum_probs=258.9
Q ss_pred chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccCCCC--
Q psy2558 35 HVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSY-- 112 (348)
Q Consensus 35 ~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~-- 112 (348)
+..+..+|++||++|+|+|.+.+|+.+|+.+|++|+++|++||+. ..++++|+|+|+|||.+||++++++.......
T Consensus 15 e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~ 93 (322)
T 1pci_A 15 TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQ 93 (322)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCC
T ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCcccccc
Confidence 445678899999999999998999999999999999999999964 34566699999999999999988765433211
Q ss_pred CCCCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCC
Q psy2558 113 ADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGS 192 (348)
Q Consensus 113 ~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~ 192 (348)
.............||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||+
T Consensus 94 ~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~~~~gC~GG~ 173 (322)
T 1pci_A 94 SYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGY 173 (322)
T ss_dssp CCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCTTSCGGGCBC
T ss_pred ccccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcCCCCCCCCCC
Confidence 10000001122468999999999999999999999999999999999999999999999999999999997788999999
Q ss_pred hHHHHHHHHHhcCCCccCCCcccccCCCCccccccc-cceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCcc
Q psy2558 193 ISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQF 268 (348)
Q Consensus 193 ~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~-~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~ 268 (348)
+..|++|+.++ ||++|++|||.+..+.|..... ...+++.+|..++. ++++|+++|++ |||+++|++. +|++
T Consensus 174 ~~~a~~yi~~~---Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~ 249 (322)
T 1pci_A 174 PPYALEYVAKN---GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQL 249 (322)
T ss_dssp HHHHHHHHHHH---CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHT
T ss_pred HHHHHHHHHHh---CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEecccccccc
Confidence 99999999999 8999999999999999987642 35678999999987 88999999987 9999999994 8999
Q ss_pred ccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCcee
Q psy2558 269 YVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVR 344 (348)
Q Consensus 269 y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~ 344 (348)
|++|||.+ .|. ..++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++
T Consensus 250 Y~~Gvy~~---~c~---~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~ 317 (322)
T 1pci_A 250 YKGGIFEG---PCG---TKVDGAVTAVGYGK------SGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY 317 (322)
T ss_dssp EEEEEECC---SCC---SCCCEEEEEEEEEE------ETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCE
T ss_pred cCCeEeCC---CCC---CCCCEEEEEEEEec------cCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCccccee
Confidence 99999976 473 34799999999998 67899999999999999999999999996 8999999999
Q ss_pred EeeC
Q psy2558 345 SALV 348 (348)
Q Consensus 345 ~~~~ 348 (348)
||++
T Consensus 318 yp~~ 321 (322)
T 1pci_A 318 YPTK 321 (322)
T ss_dssp EECC
T ss_pred EEEe
Confidence 9985
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.8e-80 Score=579.02 Aligned_cols=284 Identities=29% Similarity=0.480 Sum_probs=248.7
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccCC-C--CCCCCC
Q psy2558 41 LFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKP-S--YADRSV 117 (348)
Q Consensus 41 ~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~-~--~~~~~~ 117 (348)
+|++||++|+|.|.+.+|+.+|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++.+... . ......
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~----g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~ 78 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G----AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLN 78 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C----CCCTTTTSCHHHHHHHHSBCHHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C----CCCcccCCCHHHHHHHhcCCCCccccccCCcccc
Confidence 49999999999998889999999999999999999 74 2 999999999999998766532210 0 000111
Q ss_pred CC---CCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCC-CCCCCCCh
Q psy2558 118 PA---MIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED-DGCEGGSI 193 (348)
Q Consensus 118 ~~---~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~-~gc~GG~~ 193 (348)
.. .....+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+ + .||+||++
T Consensus 79 ~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~--~~~GC~GG~~ 156 (312)
T 1xkg_A 79 AETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCA--SQHGCHGDTI 156 (312)
T ss_dssp ---CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHT--CSSTTBCCCH
T ss_pred cccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhcc--CCCCCCCCCH
Confidence 00 001136899999999999999999999999999999999999999999999999999999998 4 89999999
Q ss_pred HHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHh-CCCEEEEEEc-C--cCcc
Q psy2558 194 SNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVE-NGPMAVAINA-Y--ALQF 268 (348)
Q Consensus 194 ~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~-~gPv~v~~~~-~--~f~~ 268 (348)
..|++|+.+. ||++|++|||.+..+.|. ......+++.+|..++. ++++||++|++ +|||+|+|++ . +|++
T Consensus 157 ~~a~~yi~~~---Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~ 232 (312)
T 1xkg_A 157 PRGIEYIQHN---GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRH 232 (312)
T ss_dssp HHHHHHHHHH---CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHT
T ss_pred HHHHHHHHHc---CCCccccCCccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccc
Confidence 9999999998 999999999999999999 55556789999999986 89999999999 9999999999 4 7999
Q ss_pred ccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEeeC
Q psy2558 269 YVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348 (348)
Q Consensus 269 y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~~ 348 (348)
|++|||..+ .|.. ... +|||+|||||+ ++|++|||||||||++||++|||||+|+.|.|||+++++||++
T Consensus 233 Y~~GVy~~~--~c~~-~~~-~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 233 YDGRTIIQR--DNGY-QPN-YHAVNIVGYSN------AQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp CCSSSCBCC--CCSS-CCE-EEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred cCCcEEcCC--CCCC-CcC-ceEEEEEEEec------cCCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 999999875 6831 335 99999999998 6789999999999999999999999999999999999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.1e-72 Score=546.91 Aligned_cols=281 Identities=30% Similarity=0.515 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCccccc-cCcCCCCCHHHHHhhhhccccCCC--CCCCCCC-CCCCCCCCCceEEc
Q psy2558 57 VEYYSRLHIFSGNLRKIQLLQDTEHGSGVYG-LNEFSDLSTAEFQAKYLGFKLKPS--YADRSVP-AMIPNITLPRAFDW 132 (348)
Q Consensus 57 ~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g-~N~FsDlt~~Ef~~~~~~~~~~~~--~~~~~~~-~~~~~~~lP~~~Dw 132 (348)
.|+.+|++||++|+++|++||+.. .+++.+ +|+|+|||.+||++++++.+.... ...+... ......+||++|||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~-~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~Dw 213 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQ-KSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDW 213 (441)
T ss_dssp ------------------------------------------------------------------------CCCSCEET
T ss_pred hhHHHHHHHHHHHHHHHHHHHccC-CceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEEC
Confidence 567899999999999999999642 344556 899999999999998776433211 1111100 01134579999999
Q ss_pred ccCC---CCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCC--CCCHHHhhhccCCCCCCCCCChHHH-HHHHHHhcCC
Q psy2558 133 REYD---AVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLV--SLSEQELIDCDQEDDGCEGGSISNA-FDTIMSKLGG 206 (348)
Q Consensus 133 r~~g---~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~--~lS~q~l~dc~~~~~gc~GG~~~~a-~~~~~~~~~~ 206 (348)
|+.+ +|+||||||.||||||||++++||++++++++... .||||+|+||+..+.||+||++..+ ++|++++
T Consensus 214 R~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~~~--- 290 (441)
T 3pdf_A 214 RNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDF--- 290 (441)
T ss_dssp TCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHHHT---
T ss_pred CcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHHhc---
Confidence 9964 89999999999999999999999999999998754 5999999999987899999999987 8999988
Q ss_pred CccCCCcccccCCCCccccccccceEEEcceEEeC-----cCHHHHHHHHHhCCCEEEEEEc-CcCccccCceecCCCcc
Q psy2558 207 GLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVS-----RDETDMAKYLVENGPMAVAINA-YALQFYVTGVSHPIQFF 280 (348)
Q Consensus 207 Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~-----~~~~~i~~~l~~~gPv~v~~~~-~~f~~y~~Gi~~~~~~~ 280 (348)
||++|++|||.+..+.|........+.+.+|..++ .++++||++|+++|||+|+|++ .+|++|++|||... .
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~--~ 368 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT--G 368 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC---
T ss_pred CCCcHHHeeecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEecC--C
Confidence 99999999999999999987666667788888875 3889999999999999999999 69999999999875 3
Q ss_pred CCC---CCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEee
Q psy2558 281 CDG---GNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 281 c~~---~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
|.. ....++|||+|||||++. ++|++|||||||||++|||+|||||+||.|.|||+++++++.
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~----~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDS----ASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 434 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECT----TTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccC----CCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEee
Confidence 311 124589999999999742 478999999999999999999999999999999999998653
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.9e-71 Score=518.47 Aligned_cols=271 Identities=25% Similarity=0.438 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCccccccC-cCCCCCHHHHHhhhhccccCCCC---CCCCCC-CCCCCCCCCceEEccc
Q psy2558 60 YSRLHIFSGNLRKIQLLQDTEHGSGVYGLN-EFSDLSTAEFQAKYLGFKLKPSY---ADRSVP-AMIPNITLPRAFDWRE 134 (348)
Q Consensus 60 ~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N-~FsDlt~~Ef~~~~~~~~~~~~~---~~~~~~-~~~~~~~lP~~~Dwr~ 134 (348)
+.|+.++..+.++|++||+....+++.|+| +|+|||.|||+++ ++..+.+.. ...... ......+||++||||+
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~ 80 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAE 80 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccccCccccccccccCCCCcEehhH
Confidence 467888889999999999753345666999 8999999999986 443322111 000000 0001257999999999
Q ss_pred C----CCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCC-CCCCCHHHhhhccC-CCCCCCCCChHHHHHHHHHhcCCCc
Q psy2558 135 Y----DAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKK-LVSLSEQELIDCDQ-EDDGCEGGSISNAFDTIMSKLGGGL 208 (348)
Q Consensus 135 ~----g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~-~~~lS~q~l~dc~~-~~~gc~GG~~~~a~~~~~~~~~~Gi 208 (348)
+ |.|+||||||.||||||||++++||++++++++. ++.||||+|+||+. .+.||+||++..|++|++++ ||
T Consensus 81 ~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~---Gi 157 (325)
T 3hhi_A 81 AWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST---GL 157 (325)
T ss_dssp HSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT---CB
T ss_pred hcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh---CC
Confidence 8 8999999999999999999999999999999997 89999999999985 46899999999999999998 99
Q ss_pred cCCCccccc-CC----------CCccccc-------------c---ccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEE
Q psy2558 209 EEEKTYPYR-GD----------DKACRLN-------------K---KATQVKINGYVSVSRDETDMAKYLVENGPMAVAI 261 (348)
Q Consensus 209 ~~e~~yPy~-~~----------~~~c~~~-------------~---~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~ 261 (348)
++|++|||. +. .+.|... . ......+.+|. + .++++||++|+++|||+|+|
T Consensus 158 ~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v-~~~~~i~~~i~~~GPV~v~i 235 (325)
T 3hhi_A 158 VSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L-QGEDDYMRELFFRGPFEVAF 235 (325)
T ss_dssp CBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E-CSHHHHHHHHHHHCCEEEEE
T ss_pred CcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e-CCHHHHHHHHHHCCCEEEEE
Confidence 999999998 32 2566610 0 01123456666 5 68999999999999999999
Q ss_pred Ec-CcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccC
Q psy2558 262 NA-YALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGIN 340 (348)
Q Consensus 262 ~~-~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~ 340 (348)
++ .+|++|++|||... | +...++|||+|||||+ ++|++|||||||||++|||+|||||+||.|.|||+
T Consensus 236 ~~~~~f~~Y~~GVy~~~---~--~~~~~~HaV~iVGyG~------~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~ 304 (325)
T 3hhi_A 236 DVYEDFIAYNSGVYHHV---S--GQYLGGHAVRLVGWGT------SNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIE 304 (325)
T ss_dssp EEEHHHHTCCSSEECCC---S--CCEEEEEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTT
T ss_pred EeccccccccCceecCC---C--CCCCCCEEEEEEEEEe------cCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCc
Confidence 99 58999999999863 3 2456799999999997 78999999999999999999999999999999999
Q ss_pred CceeEee
Q psy2558 341 DYVRSAL 347 (348)
Q Consensus 341 ~~~~~~~ 347 (348)
+++++++
T Consensus 305 ~~~~~g~ 311 (325)
T 3hhi_A 305 DGGSAGI 311 (325)
T ss_dssp SCEEEEE
T ss_pred cceEEee
Confidence 9999875
No 12
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-67 Score=468.71 Aligned_cols=213 Identities=49% Similarity=0.956 Sum_probs=197.2
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~-- 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNL-- 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999987
Q ss_pred CCccCCCcccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGN 285 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~ 285 (348)
+||++|++|||.+..+.|+.......+++.++..++.++++||++|+++|||++++++..|++|++|||......| +.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~~~~c--~~ 156 (214)
T 1m6d_A 79 GGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLC--SP 156 (214)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCCGGGS--CT
T ss_pred cCcccccCcCcCCCCCcCCCCcccceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCCCCcC--CC
Confidence 5899999999999999999776666678889988888999999999999999999999779999999998642257 35
Q ss_pred CCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEeeC
Q psy2558 286 ENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348 (348)
Q Consensus 286 ~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~~ 348 (348)
..++|||+|||||+ ++|++|||||||||++|||+|||||+|+.|.|||+++++||++
T Consensus 157 ~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 157 WLIDHAVLLVGYGQ------RSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp TCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CcCCEEEEEEEEee------cCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 57899999999998 6789999999999999999999999999999999999999985
No 13
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=7.2e-67 Score=464.84 Aligned_cols=211 Identities=44% Similarity=0.832 Sum_probs=193.5
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+||||||||.||||||||++++||+++++++++.++||||+|+||+..+.||+||++..|++|++++.+
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 69999999999999999999999999999999999999999999999999999999988899999999999999998533
Q ss_pred CCccCCCcccccCCC---CccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDD---KACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~---~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~ 282 (348)
+|+++|++|||.+.. ..|........+++.++..++.++++||++|+++|||++++++++|++|++|||.. |
T Consensus 81 gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Giy~~----~- 155 (215)
T 3i06_A 81 GAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----C- 155 (215)
T ss_dssp TEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECCTTGGGCCSSEECS----C-
T ss_pred ccccccCccCCcCCCCCCCccccCCcccceEecceEEeCChHHHHHHHHHHCCCEEEEEEchHHhcCCCCcccC----C-
Confidence 589999999998654 47887766667899999999889999999999999999999999999999999964 5
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~~ 348 (348)
....++|||+|||||+ +++++|||||||||++|||+|||||+|+.|.|||++++++|++
T Consensus 156 -~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 156 -VSEQLDHGVLLVGYND------SAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp -CCSCCCEEEEEEEEES------SSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred -CCCccCcEEEEEEEec------cCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 3566799999999998 7789999999999999999999999999999999999999985
No 14
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=5.9e-67 Score=465.75 Aligned_cols=211 Identities=42% Similarity=0.832 Sum_probs=198.5
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~-- 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKN-- 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999878999999999999999887
Q ss_pred CCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c~ 282 (348)
+||++|++|||.+..+.|...+.....++.+|..++. ++++||++|+++|||++++++. +|++|++|||..+ .|
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~--~~- 155 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDE--SC- 155 (215)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCT--TC-
T ss_pred CCccccccCCCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCC--CC-
Confidence 6999999999999999999877777788999999987 8999999999999999999994 8999999999875 57
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~~~ 348 (348)
+...++|||+|||||+ +++++|||||||||++|||+|||||+|+. |+|||+++++||+|
T Consensus 156 -~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 156 -NSDNLNHAVLAVGYGI------QKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp -CTTCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred -CCChhhCEEEEEEEec------cCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 3567899999999998 67899999999999999999999999997 99999999999986
No 15
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=8.2e-67 Score=488.89 Aligned_cols=260 Identities=28% Similarity=0.556 Sum_probs=209.6
Q ss_pred HHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccCCCC-CCCCCCCCCCCCCCCceEEcccC----CCCCccCC
Q psy2558 69 NLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSY-ADRSVPAMIPNITLPRAFDWREY----DAVTGVKD 143 (348)
Q Consensus 69 n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pv~d 143 (348)
+.++|++||+. ..++++|+| |+|+|.||++. +++..+.+.. ..+.. .....+||++||||++ +.|+||||
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~~~~~~--~~~~~~lP~s~DwR~~~~~c~~vtpVkd 85 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKPPQRVM--FTEDLKLPASFDAREQWPQCPTIKEIRD 85 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCCSEEEC--CCSCCCCCSSEEHHHHCTTCGGGTCCCB
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCccccCcccc--cccccCCCCCEechhccCCCCCcCCccc
Confidence 35789999964 345666999 99988877766 5665443221 11111 1123579999999987 68999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCHHHhhhccC--CCCCCCCCChHHHHHHHHHhcCCCccCCCcc-----
Q psy2558 144 QTMCGSSWAFSTTGNIEGVYAAKTKK--LVSLSEQELIDCDQ--EDDGCEGGSISNAFDTIMSKLGGGLEEEKTY----- 214 (348)
Q Consensus 144 Qg~cgsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l~dc~~--~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~y----- 214 (348)
||.||||||||++++||++++|+++. ++.||+|+|+||+. .+.||+||++..|++|++++ ||++|++|
T Consensus 86 Qg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~---Gi~te~~Y~~~~~ 162 (317)
T 3pbh_A 86 QGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK---GLVSGGLYESHVG 162 (317)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT---CEEBBCSTTCCCB
T ss_pred cCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh---CCCcchhccCCCC
Confidence 99999999999999999999999874 89999999999985 46899999999999999999 99999888
Q ss_pred --cccC---------CCCcccccc---------c--------cceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEc-Cc
Q psy2558 215 --PYRG---------DDKACRLNK---------K--------ATQVKINGYVSVSRDETDMAKYLVENGPMAVAINA-YA 265 (348)
Q Consensus 215 --Py~~---------~~~~c~~~~---------~--------~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~-~~ 265 (348)
||.. ..+.|.... . ...........++.++++||++|+++|||+++|++ .+
T Consensus 163 c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~~~ 242 (317)
T 3pbh_A 163 CRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSD 242 (317)
T ss_dssp SSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEEGG
T ss_pred CcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEeccc
Confidence 9984 345564210 0 00111223345666899999999999999999999 69
Q ss_pred CccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeE
Q psy2558 266 LQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRS 345 (348)
Q Consensus 266 f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~ 345 (348)
|++|++|||... | +...++|||+|||||+ ++|++|||||||||++|||+|||||+|+.|.|||++.+++
T Consensus 243 f~~Y~~GVy~~~---~--~~~~~~HaV~iVGyG~------~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a 311 (317)
T 3pbh_A 243 FLLYKSGVYQHV---T--GEMMGGHAIRILGWGV------ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVA 311 (317)
T ss_dssp GGGEEEEEECCC---S--CCEEEEEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEE
T ss_pred ccCCCCcEEccC---C--CCCCCCEEEEEEEEEE------eCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEe
Confidence 999999999873 5 3556799999999998 7799999999999999999999999999999999999987
Q ss_pred ee
Q psy2558 346 AL 347 (348)
Q Consensus 346 ~~ 347 (348)
++
T Consensus 312 ~~ 313 (317)
T 3pbh_A 312 GI 313 (317)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 16
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=5.8e-66 Score=460.73 Aligned_cols=214 Identities=41% Similarity=0.830 Sum_probs=195.3
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCCCCChHHHHHHHH-H
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCEGGSISNAFDTIM-S 202 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~GG~~~~a~~~~~-~ 202 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.+.||+|+|+||.. .+.||+||++..|++|+. +
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999985 378999999999999997 5
Q ss_pred hcCCCccCCCcccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCcc
Q psy2558 203 KLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFF 280 (348)
Q Consensus 203 ~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~ 280 (348)
+ ||++|++|||.+..+.|+..+....+++.+|..++.++++||++|+++|||++++++. +|++|++|||..+ .
T Consensus 81 ~---Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~--~ 155 (220)
T 2xu3_A 81 G---GLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP--D 155 (220)
T ss_dssp T---CEEBTTTSCCCSSCCCCCCCGGGEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCT--T
T ss_pred C---CcccccccCCcccCcCccCCCCCcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCC--C
Confidence 5 9999999999999999997766667889999999878999999999999999999994 7999999999875 5
Q ss_pred CCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEeeC
Q psy2558 281 CDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSALV 348 (348)
Q Consensus 281 c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~~~ 348 (348)
| +...++|||+|||||++.. +++|++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 156 c--~~~~~~HaV~iVGygd~~~--~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 156 C--SSEDMDHGVLVVGYGFEST--ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp C--CSSCCCEEEEEEEEEECCC--SSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred C--CCCCCCeEEEEEEcCCccc--cCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 7 3457899999999995321 167899999999999999999999999997 89999999999986
No 17
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=4.9e-66 Score=460.73 Aligned_cols=210 Identities=38% Similarity=0.784 Sum_probs=196.1
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhcc---CCCCCCCCCChHHHHHHHHH
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCD---QEDDGCEGGSISNAFDTIMS 202 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~---~~~~gc~GG~~~~a~~~~~~ 202 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|. ..+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 24789999999999999977
Q ss_pred hcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCc
Q psy2558 203 KLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQF 279 (348)
Q Consensus 203 ~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~ 279 (348)
+ .|+++|++|||.+..+.|.........++.+|..++. ++++||++|+++|||++++++. +|++|++|||..+
T Consensus 82 ~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~-- 157 (218)
T 3ovx_A 82 N--KGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP-- 157 (218)
T ss_dssp H--TCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCT--
T ss_pred h--CCcCcccccCccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCC--
Confidence 4 4999999999999999999877777788999999976 8999999999999999999994 7999999999875
Q ss_pred cCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEeeC
Q psy2558 280 FCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSALV 348 (348)
Q Consensus 280 ~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~~~ 348 (348)
.| ...++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||+|
T Consensus 158 ~~---~~~~~HaV~iVGyg~------~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 158 SC---TQNVNHGVLVVGYGD------LNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp TC---CSCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CC---CcccCcEEEEEEEec------cCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 57 567899999999998 67899999999999999999999999998 99999999999986
No 18
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.2e-66 Score=462.57 Aligned_cols=212 Identities=37% Similarity=0.780 Sum_probs=197.3
Q ss_pred CCceEEcccCC-CCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCCCCChHHHHHHHHH
Q psy2558 126 LPRAFDWREYD-AVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCEGGSISNAFDTIMS 202 (348)
Q Consensus 126 lP~~~Dwr~~g-~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~GG~~~~a~~~~~~ 202 (348)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|++|+. .+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 69999999999 89999999999999999999999999999999999999999999984 4789999999999999998
Q ss_pred hcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC-cCccccCceecCCCcc
Q psy2558 203 KLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY-ALQFYVTGVSHPIQFF 280 (348)
Q Consensus 203 ~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~-~f~~y~~Gi~~~~~~~ 280 (348)
+ +|+++|++|||.+..+.|+..+.....++.++..++. ++++||++|+++|||++++++. +|++|++|||..+ .
T Consensus 81 ~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~--~ 156 (220)
T 8pch_A 81 N--KGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSST--S 156 (220)
T ss_dssp H--TCEEBTTTSCCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCS--S
T ss_pred c--CCcCcccccCccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCC--c
Confidence 7 6999999999999999999877777788999999976 8999999999999999999995 8999999999875 5
Q ss_pred CCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEee
Q psy2558 281 CDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 281 c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
|......++|||+|||||+ ++|++|||||||||++|||+|||||+|+.|+|||+++++||+
T Consensus 157 ~~~~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 157 CHKTPDKVNHAVLAVGYGE------ENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp CCCSTTTCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCCCCCcCCcEEEEEEEEc------cCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 7433447899999999998 678999999999999999999999999999999999999997
No 19
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=7.3e-66 Score=460.79 Aligned_cols=210 Identities=30% Similarity=0.562 Sum_probs=195.3
Q ss_pred CCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHh
Q psy2558 124 ITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSK 203 (348)
Q Consensus 124 ~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~ 203 (348)
.+||++||||++|+++||||||.||||||||++++||+++++++++.++||||+|++|.. +.||+||++..|++|++++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS-QHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-SSTTBCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC-CCCCCCCCHHHHHHHHHHc
Confidence 478999999999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred cCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHh-CCCEEEEEEc---CcCccccCceecCCC
Q psy2558 204 LGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVE-NGPMAVAINA---YALQFYVTGVSHPIQ 278 (348)
Q Consensus 204 ~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~-~gPv~v~~~~---~~f~~y~~Gi~~~~~ 278 (348)
|+++|++|||.+..+.|+ .+....+++.++..++. ++++||++|++ +|||++++++ .+|++|++||+...
T Consensus 87 ---Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~- 161 (222)
T 3f5v_A 87 ---GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQR- 161 (222)
T ss_dssp ---CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCC-
T ss_pred ---CCCchhhCCCcccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecC-
Confidence 999999999999999999 55667789999999965 89999999999 8999999998 26999999988654
Q ss_pred ccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEeeC
Q psy2558 279 FFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348 (348)
Q Consensus 279 ~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~~ 348 (348)
.| ....++|||+|||||+ ++|++|||||||||++|||+|||||+|+.|.|||+++++||+|
T Consensus 162 -~~--~~~~~~HaV~iVGyg~------~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 162 -DN--GYQPNYHAVNIVGYSN------AQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp -CC--SSSCEEEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred -CC--CCCccCcEEEEEEEec------cCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 34 3677899999999998 7789999999999999999999999999999999999999986
No 20
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=3.2e-65 Score=462.50 Aligned_cols=212 Identities=41% Similarity=0.805 Sum_probs=194.5
Q ss_pred CCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhc
Q psy2558 125 TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKL 204 (348)
Q Consensus 125 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~ 204 (348)
+||++||||++|+++||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|++++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~- 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKH- 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHT-
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-
Confidence 4799999999999999999999999999999999999999999999999999999999778899999999999999987
Q ss_pred CCCccCCCcccccCCCCccccccccceEEEcce---EEeCc-CHHHHHHHHHh---CCCEEEEEEcCcCccccCceecCC
Q psy2558 205 GGGLEEEKTYPYRGDDKACRLNKKATQVKINGY---VSVSR-DETDMAKYLVE---NGPMAVAINAYALQFYVTGVSHPI 277 (348)
Q Consensus 205 ~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~---~~i~~-~~~~i~~~l~~---~gPv~v~~~~~~f~~y~~Gi~~~~ 277 (348)
+||++|++|||.+..+.|........+++.+| ..++. ++++||++|++ +|||++++++.+|++|++|||..+
T Consensus 80 -~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y~~Giy~~~ 158 (246)
T 2b1m_A 80 -GGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYDGG 158 (246)
T ss_dssp -TCBCBTTTSCCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECCTTGGGCCSSEECCT
T ss_pred -CCcCccccccccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEcchhhcccceeecCC
Confidence 69999999999999999997655566788888 77875 88999999998 699999999988999999999875
Q ss_pred CccCCCCCCC-CCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 278 QFFCDGGNEN-LSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 278 ~~~c~~~~~~-~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
.|. ... ++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 159 --~c~--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 159 --NCS--SPYGINHFVLIVGYGS------EDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp --TCC--SSCCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred --CCC--CCCcCceEEEEEEEec------cCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 573 333 899999999998 67899999999999999999999999997 89999999999985
No 21
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=3.5e-65 Score=455.71 Aligned_cols=209 Identities=42% Similarity=0.843 Sum_probs=192.4
Q ss_pred CCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhc
Q psy2558 125 TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKL 204 (348)
Q Consensus 125 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~ 204 (348)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||...+.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~- 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNN- 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHh-
Confidence 5899999999999999999999999999999999999999999999999999999999778899999999999999987
Q ss_pred CCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccC
Q psy2558 205 GGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFC 281 (348)
Q Consensus 205 ~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c 281 (348)
+||++|++|||.+..+.|........+++.+|..++. ++++||++|++ |||++++++. +|++|++|||.. .|
T Consensus 81 -~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~---~~ 155 (221)
T 1cqd_A 81 -GGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTG---SC 155 (221)
T ss_dssp -TSBCBTTTSCCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC---CC
T ss_pred -CCccccccCCccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccC---CC
Confidence 5999999999999999998766566688999998887 79999999975 9999999994 899999999987 47
Q ss_pred CCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 282 DGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 282 ~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
...++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 156 ---NISANHALTVVGYGT------ENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp ---CCCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred ---CCcCCeEEEEEEEcc------cCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 345899999999998 67899999999999999999999999983 89999999999985
No 22
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=4.5e-65 Score=452.99 Aligned_cols=207 Identities=39% Similarity=0.822 Sum_probs=190.9
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-- 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITN-- 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999768899999999999999987
Q ss_pred CCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc-C-cCccccCceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA-Y-ALQFYVTGVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~-~-~f~~y~~Gi~~~~~~~c~ 282 (348)
+|+++|++|||.+..+.|.... ...+++.+|..++. ++++||++|++ |||++++++ . +|++|++|||.. .|.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~---~c~ 153 (215)
T 1iwd_A 79 GGIDTQQNYPYSAVQGSCKPYR-LRVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTG---PCG 153 (215)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTC-CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC---CCC
T ss_pred CCcccccccCccCCCCCCCCCC-CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECC---CCC
Confidence 5999999999999999998654 35678889988876 78999999986 999999999 4 699999999986 472
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
..++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 ---~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 154 ---TAQNHGVVIVGYGT------QSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp ---CCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred ---CcCCEEEEEEEEec------cCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 46799999999998 67899999999999999999999999997 89999999999986
No 23
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=4.7e-65 Score=453.32 Aligned_cols=207 Identities=37% Similarity=0.742 Sum_probs=190.9
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.++||+|+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999999
Q ss_pred CCccCCCcccccCCCCccccccc-cceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFC 281 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~-~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c 281 (348)
||++|++|||.+..+.|+.... ...+++.+|..++. ++++||++|++ |||++++++. +|++|++|||.. .|
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~---~~ 153 (216)
T 1ppo_A 79 -GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEG---PC 153 (216)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECC---SC
T ss_pred -CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECC---CC
Confidence 8999999999999999986543 45678899998886 89999999987 9999999993 899999999986 47
Q ss_pred CCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 282 DGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 282 ~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
. ..++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 ~---~~~~HaV~iVGyg~------~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 154 G---TKVDHAVTAVGYGK------SGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp C---SCCCEEEEEEEEEE------ETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred C---CCCCEEEEEEEeec------cCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 2 34799999999998 66899999999999999999999999985 89999999999986
No 24
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2.1e-65 Score=457.58 Aligned_cols=211 Identities=38% Similarity=0.785 Sum_probs=188.3
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||||+|+||+..+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-- 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITN-- 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHH--
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHc--
Confidence 699999999999999999999999999999999999999999999999999999999878999999999999999988
Q ss_pred CCccCCCcccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEc-C-cCccccC-ceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINA-Y-ALQFYVT-GVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~-~-~f~~y~~-Gi~~~~~~~c~ 282 (348)
+||++|++|||.+..+.|...... .+++.+|..++.++++||++|. +|||++++++ . +|++|++ |||... .|.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~-~~~i~~~~~v~~~~~~i~~~l~-~GPV~v~i~~~~~~f~~Y~~~Giy~~~--~~~ 154 (222)
T 3u8e_A 79 GGIASDANYPYTGVDGTCDLNKPI-AARIDGYTNVPNSSSALLDAVA-KQPVSVNIYTSSTSFQLYTGPGIFAGS--SCS 154 (222)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCSCC-CBCCCEEEECCSCHHHHHHHHH-HSCEEEEECCCSHHHHTCCCSSCBCCT--TCC
T ss_pred CCccchhcCCCcccCCccccCCCC-eEEEccEEEeCCcHHHHHHHHh-CCCEEEEEEecChhhhcEeCCceECCC--ccc
Confidence 699999999999999999876555 6888999999878999999995 5999999999 3 7999999 999875 573
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCC-CcCEEEEEcCCCCCCCCCceEEEEcCCC----eeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHK-AVPYWIIKNSWGEGWGEKGYFRLYRGDG----SCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~cgi~~~~~~~~~ 348 (348)
.....++|||+|||||+ ++ +++|||||||||++|||+|||||+|+.| +|||+++++||++
T Consensus 155 ~~~~~~~HaV~iVGyg~------~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 155 DDPATVDHTVLIVGYGS------NGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CCGGGCCEEEEEEEEEE------SSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCCCcCCEEEEEEEEee------cCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 22246899999999998 55 8899999999999999999999999987 9999999999985
No 25
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=5.3e-65 Score=454.50 Aligned_cols=208 Identities=40% Similarity=0.830 Sum_probs=190.2
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCC--CCCCCCCChHHHHHHHHHh
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQE--DDGCEGGSISNAFDTIMSK 203 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~--~~gc~GG~~~~a~~~~~~~ 203 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999965 7899999999999999987
Q ss_pred cCCCccCCCcccccCCCCcccccccc-ceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCc
Q psy2558 204 LGGGLEEEKTYPYRGDDKACRLNKKA-TQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQF 279 (348)
Q Consensus 204 ~~~Gi~~e~~yPy~~~~~~c~~~~~~-~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~ 279 (348)
+||++|++|||.+..+.|...... ..+++.+|..++. ++++|+++| .+|||++++++. +|++|++|||..
T Consensus 81 --~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~--- 154 (220)
T 3p5u_A 81 --GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTG--- 154 (220)
T ss_dssp --TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECC---
T ss_pred --CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECC---
Confidence 699999999999999999865432 3478889999976 888999998 679999999994 799999999976
Q ss_pred cCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCC---eeccCCceeEeeC
Q psy2558 280 FCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDG---SCGINDYVRSALV 348 (348)
Q Consensus 280 ~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~cgi~~~~~~~~~ 348 (348)
.| ....+|||+|||||+ ++|++|||||||||++|||+|||||+|+.| .|||+++++||++
T Consensus 155 ~~---~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 155 PC---GTAVDHAVTIVGYGT------EGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CC---CCSCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred CC---CCccceEEEEEEEec------CCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 47 345799999999997 778999999999999999999999999986 9999999999985
No 26
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=8.9e-65 Score=452.17 Aligned_cols=207 Identities=42% Similarity=0.789 Sum_probs=190.4
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.++||+|+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc--
Confidence 699999999999999999999999999999999999999999999999999999999778999999999999999999
Q ss_pred CCccCCCcccccCCCCccccccc-cceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFC 281 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~-~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c 281 (348)
||++|++|||.+..+.|+.... ...+++.+|..++. ++++||++|++ |||++++++. +|++|++|||.. .|
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~---~~ 153 (218)
T 1yal_A 79 -GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDG---PC 153 (218)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC---SC
T ss_pred -CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECC---CC
Confidence 8999999999999999986543 45678999998886 88999999976 9999999993 899999999986 47
Q ss_pred CCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 282 DGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 282 ~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
. ..++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 ~---~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 154 G---TKLDHAVTAVGYGT------SDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp C---SCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred C---CCCCEEEEEEEeec------cCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 2 34799999999998 66899999999999999999999999985 89999999999985
No 27
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.7e-64 Score=446.34 Aligned_cols=203 Identities=39% Similarity=0.736 Sum_probs=187.6
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.++||||+|+||+..+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT--
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999998
Q ss_pred CCccCCCcccccCCCCcccccc-ccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc-C-cCccccCceecCCCccC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNK-KATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA-Y-ALQFYVTGVSHPIQFFC 281 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~-~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~-~-~f~~y~~Gi~~~~~~~c 281 (348)
||++|++|||.+..+.|+... ....+++.+|..++. ++++||++|++ |||++++++ . +|++|++|||.. .|
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~---~~ 153 (212)
T 2cio_A 79 -GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVG---PC 153 (212)
T ss_dssp -CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC---CC
T ss_pred -CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecC---CC
Confidence 899999999999999998765 345678899998886 88999999986 999999999 4 799999999986 47
Q ss_pred CCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 282 DGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 282 ~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
. ..++|||+|||||+ +|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 154 ~---~~~~HaV~iVGyg~----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 154 G---NKVDHAVAAVGYGP----------NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp C---SCCCEEEEEEEEET----------TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred C---CCCCEEEEEEEecC----------CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 3 35799999999995 7999999999999999999999996 89999999999985
No 28
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.9e-64 Score=447.40 Aligned_cols=204 Identities=38% Similarity=0.746 Sum_probs=185.2
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|++|||||||.||||||||++++||+++++++++.++||||+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc--
Confidence 699999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred CCccCCCcccccCCCCcccccc-ccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNK-KATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~-~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c~ 282 (348)
|+++|++|||.+..+.|.... ....+++.+|..++.+++++++++..+|||++++++. +|++|++|||.. .|
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~---~~- 153 (213)
T 3ioq_A 79 -GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAG---PC- 153 (213)
T ss_dssp -CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECC---SC-
T ss_pred -CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcC---CC-
Confidence 999999999999999998643 3566888999999874444444445679999999994 899999999987 35
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
...++|||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 --~~~~~HaV~iVGyg~----------~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 154 --GTSIDHAVAAVGYGN----------DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp --CSCCCEEEEEEEEET----------TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred --CCccCceEEEEecCC----------CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 456799999999985 7999999999999999999999997 89999999999985
No 29
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=4.6e-64 Score=444.27 Aligned_cols=202 Identities=42% Similarity=0.817 Sum_probs=186.7
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.++||||+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-- 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINN-- 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999778999999999999999987
Q ss_pred CCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc-C-cCccccCceecCCCccCC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA-Y-ALQFYVTGVSHPIQFFCD 282 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~-~-~f~~y~~Gi~~~~~~~c~ 282 (348)
+|+++|++|||.+..+.|+. ....+++.+|..++. ++++||++|++ |||++++++ . +|++|++|||.. .|.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~---~c~ 152 (208)
T 1o0e_A 79 GGIDTQANYPYKAVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSG---PCG 152 (208)
T ss_dssp TCBCBTTTSCCCSSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC---CCC
T ss_pred CCcCcccccCccCCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECC---CCC
Confidence 69999999999999999986 344578889988876 88999999987 999999999 4 799999999986 472
Q ss_pred CCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC--CeeccCCceeEeeC
Q psy2558 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD--GSCGINDYVRSALV 348 (348)
Q Consensus 283 ~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~--~~cgi~~~~~~~~~ 348 (348)
..++|||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 153 ---~~~~HaV~iVGyg~----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 153 ---TKLNHGVTIVGYQA----------NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp ---SCCCEEEEEEEECS----------SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred ---CcCCEEEEEEEeCC----------CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 35799999999995 7999999999999999999999997 89999999999985
No 30
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=6.2e-64 Score=445.34 Aligned_cols=203 Identities=41% Similarity=0.820 Sum_probs=188.2
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||...+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH--
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh--
Confidence 699999999999999999999999999999999999999999999999999999999768899999999999999999
Q ss_pred CCccCCCcccccCCCCccccccc-cceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCCCccC
Q psy2558 206 GGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFC 281 (348)
Q Consensus 206 ~Gi~~e~~yPy~~~~~~c~~~~~-~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~~~~c 281 (348)
||++|++|||.+..+.|+.... ...+++.+|..++. ++++||++|++ |||++++++. +|++|++|||.. .|
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~---~~ 153 (214)
T 2bdz_A 79 -GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEG---PC 153 (214)
T ss_dssp -CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC---SC
T ss_pred -CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecC---CC
Confidence 9999999999999999987654 45688999998876 88999999987 9999999994 899999999987 47
Q ss_pred CCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 282 DGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 282 ~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
...++|||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 ---~~~~~HaV~iVGyg~----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 154 ---GTNTDHAVTAVGYGK----------TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp ---CSCCCEEEEEEEECS----------SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred ---CCCCCeEEEEEEcCC----------CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 345899999999995 7999999999999999999999986 89999999999985
No 31
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.1e-64 Score=454.01 Aligned_cols=213 Identities=45% Similarity=0.848 Sum_probs=194.8
Q ss_pred CCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCC--CCCCCCCChHHHHHHH
Q psy2558 123 NITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQE--DDGCEGGSISNAFDTI 200 (348)
Q Consensus 123 ~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~--~~gc~GG~~~~a~~~~ 200 (348)
..+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|++|... +.||+||++..|++|+
T Consensus 4 ~~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~ 83 (224)
T 3f75_A 4 PSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYV 83 (224)
T ss_dssp GGGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHH
T ss_pred ccCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999854 7899999999999999
Q ss_pred HHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecCC
Q psy2558 201 MSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPI 277 (348)
Q Consensus 201 ~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~~ 277 (348)
.++ +||++|++|||.+..+.|+........++.+|..++. ++++||++|+ +|||++++++. +|++|++|||.+
T Consensus 84 ~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~~- 159 (224)
T 3f75_A 84 LDS--GGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFDA- 159 (224)
T ss_dssp HHH--TCBCBTTTSCCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEECC-
T ss_pred HHh--CCccccccCCCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceECC-
Confidence 984 3999999999999999999776666678899999876 8899999998 89999999994 799999999983
Q ss_pred CccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC---CeeccCCceeEeeC
Q psy2558 278 QFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD---GSCGINDYVRSALV 348 (348)
Q Consensus 278 ~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~~cgi~~~~~~~~~ 348 (348)
.| ...++|||+|||||++. +++++|||||||||++||++|||||+|+. |.|||+++++||+|
T Consensus 160 --~~---~~~~~Hav~iVGyg~~~----~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 160 --SC---GTDLDHGVLLVGYGTDK----ESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp --CC---CCCCCEEEEEEEEEEET----TTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred --CC---CCccCeEEEEEEEeccc----CCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 57 46789999999999831 27889999999999999999999999998 99999999999986
No 32
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=8.6e-64 Score=448.88 Aligned_cols=210 Identities=48% Similarity=0.868 Sum_probs=190.0
Q ss_pred CCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC-CCCCCCCCChHHHHHHHHHh
Q psy2558 125 TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ-EDDGCEGGSISNAFDTIMSK 203 (348)
Q Consensus 125 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~~gc~GG~~~~a~~~~~~~ 203 (348)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999985 57899999999999999987
Q ss_pred cCCCccCCCcccccCCCCcccccc-ccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEc-C-cCccccCceecCCCc
Q psy2558 204 LGGGLEEEKTYPYRGDDKACRLNK-KATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINA-Y-ALQFYVTGVSHPIQF 279 (348)
Q Consensus 204 ~~~Gi~~e~~yPy~~~~~~c~~~~-~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~-~-~f~~y~~Gi~~~~~~ 279 (348)
+|+++|++|||.+..+.|.... ....+++.+|..++. +++.|+++|++ |||+++|++ . +|++|++|||..
T Consensus 81 --~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~--- 154 (229)
T 1s4v_A 81 --GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG--- 154 (229)
T ss_dssp --TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC---
T ss_pred --CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECC---
Confidence 6999999999999999998652 234578889988876 88899999987 999999999 3 899999999986
Q ss_pred cCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 280 FCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 280 ~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
.|. ..++|||+|||||++ .+|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 155 ~c~---~~~~HaV~iVGyg~~-----~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 155 SCG---TELDHGVAIVGYGTT-----IDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CCC---CCCCEEEEEEEEEEC-----TTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCC---CCCCeEEEEEEeccc-----cCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 472 347999999999983 33889999999999999999999999995 89999999999985
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=5.5e-64 Score=453.51 Aligned_cols=215 Identities=36% Similarity=0.779 Sum_probs=192.3
Q ss_pred CCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHH
Q psy2558 123 NITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMS 202 (348)
Q Consensus 123 ~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~ 202 (348)
..+||++||||++|+++||||||.||||||||++++||+++++++++.+.||||+|++|...+.||+||++..|++|+.+
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999977899999999999999998
Q ss_pred hcCCCccCCCcccccCCCCc-cccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC-cCccccCceecCCCc
Q psy2558 203 KLGGGLEEEKTYPYRGDDKA-CRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY-ALQFYVTGVSHPIQF 279 (348)
Q Consensus 203 ~~~~Gi~~e~~yPy~~~~~~-c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~-~f~~y~~Gi~~~~~~ 279 (348)
+ .|+++|++|||.+..+. |+.......+++.+|..++. ++++||++| |||++++++. +|++|++|||..
T Consensus 95 ~--~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~--- 166 (241)
T 2oul_A 95 L--GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDG--- 166 (241)
T ss_dssp T--TSBCBTTSSCCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSSBCCS---
T ss_pred h--CCcCccccCCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCcEEcC---
Confidence 4 39999999999998888 99766666788999998887 889999999 9999999994 899999999986
Q ss_pred cCCCCCCCCCeEEEEEEecCCCC----cCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCe----eccCCceeEeeC
Q psy2558 280 FCDGGNENLSHSVLIVGYGVDRT----KFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGS----CGINDYVRSALV 348 (348)
Q Consensus 280 ~c~~~~~~~~Hav~iVGyg~~~~----~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----cgi~~~~~~~~~ 348 (348)
.|. .. ++|||+|||||++.. ..+..|++|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 167 ~c~--~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 167 ECG--DQ-LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CBC--SS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred cCC--CC-CCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 473 33 899999999998420 0011378899999999999999999999999876 999999999986
No 34
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=8.2e-64 Score=456.04 Aligned_cols=210 Identities=47% Similarity=0.884 Sum_probs=191.1
Q ss_pred CCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC-CCCCCCCCChHHHHHHHHHh
Q psy2558 125 TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ-EDDGCEGGSISNAFDTIMSK 203 (348)
Q Consensus 125 ~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~~gc~GG~~~~a~~~~~~~ 203 (348)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||.. .+.||+||++..|++|++++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 58999999999999999999999999999999999999999999999999999999986 58899999999999999987
Q ss_pred cCCCccCCCcccccCCCCcccccc---ccc-eEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC--cCccccCceecC
Q psy2558 204 LGGGLEEEKTYPYRGDDKACRLNK---KAT-QVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHP 276 (348)
Q Consensus 204 ~~~Gi~~e~~yPy~~~~~~c~~~~---~~~-~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~--~f~~y~~Gi~~~ 276 (348)
+||++|++|||.+..+.|.... ... .+++.+|..++. ++++||++|++ |||++++++. +|++|++|||..
T Consensus 83 --~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~ 159 (262)
T 2fo5_A 83 --GGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG 159 (262)
T ss_dssp --TCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC
T ss_pred --CCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECC
Confidence 6999999999999999998654 344 688999998876 88999999987 8999999994 899999999986
Q ss_pred CCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC----CeeccCCceeEeeC
Q psy2558 277 IQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348 (348)
Q Consensus 277 ~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~~~~ 348 (348)
.|. ...+|||+|||||++ .+|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 ---~c~---~~~~HaV~IVGyg~~-----~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 160 ---ECG---TELDHGVAVVGYGVA-----EDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp ---CCC---CCCCEEEEEEEEEEC-----TTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred ---CCC---CcCCEEEEEEEEccc-----CCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 472 347999999999983 36889999999999999999999999986 45999999999985
No 35
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=8e-64 Score=452.96 Aligned_cols=215 Identities=39% Similarity=0.759 Sum_probs=192.2
Q ss_pred CCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHH
Q psy2558 123 NITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMS 202 (348)
Q Consensus 123 ~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~ 202 (348)
...||++||||++|+++||||||.||||||||++++||++++++++..+.||+|+|++|...+.||+||++..|++|+.+
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999977889999999999999998
Q ss_pred hcCCCccCCCcccccCCCCc-cccccccceEEEcceEEeCc-CHHHHHHHHHhCCCEEEEEEcC-cCccccCceecCCCc
Q psy2558 203 KLGGGLEEEKTYPYRGDDKA-CRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAY-ALQFYVTGVSHPIQF 279 (348)
Q Consensus 203 ~~~~Gi~~e~~yPy~~~~~~-c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv~v~~~~~-~f~~y~~Gi~~~~~~ 279 (348)
+ .|+++|++|||.+..+. |+.......+++.+|..++. ++++||++| |||++++++. +|++|++|||..
T Consensus 97 ~--~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~--- 168 (243)
T 3bwk_A 97 L--GGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGGFYDG--- 168 (243)
T ss_dssp T--TSBCBTTTSCCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSSSCCC---
T ss_pred h--CCcccccccCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCceecC---
Confidence 4 39999999999998888 98766566788999998987 889999999 9999999994 899999999986
Q ss_pred cCCCCCCCCCeEEEEEEecCCCC----cCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCCe----eccCCceeEeeC
Q psy2558 280 FCDGGNENLSHSVLIVGYGVDRT----KFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGS----CGINDYVRSALV 348 (348)
Q Consensus 280 ~c~~~~~~~~Hav~iVGyg~~~~----~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----cgi~~~~~~~~~ 348 (348)
.|. .. ++|||+|||||++.. ..+..|++|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 169 ~c~--~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 169 ECG--AA-PNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CCC--SS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCC--Cc-CCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 473 33 899999999998420 0011378999999999999999999999999876 999999999986
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=3.4e-61 Score=441.51 Aligned_cols=210 Identities=32% Similarity=0.648 Sum_probs=180.1
Q ss_pred CCCCceEEcccC----CCCCccCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCHHHhhhccC--CCCCCCCCChHH
Q psy2558 124 ITLPRAFDWREY----DAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTK--KLVSLSEQELIDCDQ--EDDGCEGGSISN 195 (348)
Q Consensus 124 ~~lP~~~Dwr~~----g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~dc~~--~~~gc~GG~~~~ 195 (348)
.+||++||||+. +.|+||||||.||||||||++++||++++++++ ..+.||||+|+||+. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 468999999987 789999999999999999999999999999875 479999999999985 478999999999
Q ss_pred HHHHHHHhcCCCccC-------CCccccc---------CCCCccccc---------c----c----cceEEEcceEEeCc
Q psy2558 196 AFDTIMSKLGGGLEE-------EKTYPYR---------GDDKACRLN---------K----K----ATQVKINGYVSVSR 242 (348)
Q Consensus 196 a~~~~~~~~~~Gi~~-------e~~yPy~---------~~~~~c~~~---------~----~----~~~~~i~~~~~i~~ 242 (348)
|++|++++ |+++ |++|||. +..+.|... . . ........+..++.
T Consensus 85 a~~y~~~~---Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~ 161 (266)
T 3cbj_A 85 AWNFWTRK---GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSN 161 (266)
T ss_dssp HHHHHHHT---CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCS
T ss_pred HHHHHHHh---CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCC
Confidence 99999998 9999 9999998 345556421 0 0 00111223345666
Q ss_pred CHHHHHHHHHhCCCEEEEEEc-CcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCC
Q psy2558 243 DETDMAKYLVENGPMAVAINA-YALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEG 321 (348)
Q Consensus 243 ~~~~i~~~l~~~gPv~v~~~~-~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~ 321 (348)
++++||++|+++|||+++|++ .+|++|++|||... | +...++|||+|||||+ ++|++|||||||||++
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~---~--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~ 230 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHV---T--GEMMGGHAIRILGWGV------ENGTPYWLVANSWNTD 230 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCC---S--SCEEEEEEEEEEEEEE------ETTEEEEEEECSBCTT
T ss_pred CHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEecC---C--CCccCCeEEEEEEecc------cCCceEEEEEcCCCCc
Confidence 899999999999999999999 68999999999863 4 2455799999999998 7789999999999999
Q ss_pred CCCCceEEEEcCCCeeccCCceeEee
Q psy2558 322 WGEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 322 WG~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
|||+|||||+|+.|.|||++.+++++
T Consensus 231 WGe~Gy~~i~rg~n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 231 WGDNGFFKILRGQDHCGIESEVVAGI 256 (266)
T ss_dssp STBTTEEEEECSSCGGGTTTSCEECC
T ss_pred cCCCCEEEEEcCCCcccccCceEEEE
Confidence 99999999999999999999999875
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=8.5e-61 Score=436.19 Aligned_cols=209 Identities=31% Similarity=0.655 Sum_probs=178.6
Q ss_pred CCCceEEcccC----CCCCccCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCHHHhhhccC-CCCCCCCCChHHHH
Q psy2558 125 TLPRAFDWREY----DAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTK--KLVSLSEQELIDCDQ-EDDGCEGGSISNAF 197 (348)
Q Consensus 125 ~lP~~~Dwr~~----g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~dc~~-~~~gc~GG~~~~a~ 197 (348)
+||++||||++ ++|+||||||.||||||||++++||++++++++ ..+.||||+|+||+. .+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999998 689999999999999999999999999999976 689999999999974 46899999999999
Q ss_pred HHHHHhcCCCccCCCcc-------ccc---------CCCCcccccc--------------c----cceEEEcceEEeCcC
Q psy2558 198 DTIMSKLGGGLEEEKTY-------PYR---------GDDKACRLNK--------------K----ATQVKINGYVSVSRD 243 (348)
Q Consensus 198 ~~~~~~~~~Gi~~e~~y-------Py~---------~~~~~c~~~~--------------~----~~~~~i~~~~~i~~~ 243 (348)
+|++++ ||++|++| ||. +..+.|.... . ...........++.+
T Consensus 82 ~yi~~~---Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 158 (254)
T 3qsd_A 82 DYWVKE---GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKND 158 (254)
T ss_dssp HHHHHT---CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSC
T ss_pred HHHHHc---CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCc
Confidence 999998 99999888 996 4444553210 0 000111122356668
Q ss_pred HHHHHHHHHhCCCEEEEEEc-CcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCC
Q psy2558 244 ETDMAKYLVENGPMAVAINA-YALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGW 322 (348)
Q Consensus 244 ~~~i~~~l~~~gPv~v~~~~-~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~W 322 (348)
+++||++|+++|||++++++ .+|++|++|||... | ....++|||+|||||+ +++++|||||||||++|
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~---~--~~~~~~Hav~iVGyg~------~~g~~ywivkNSWG~~W 227 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHI---T--GETLGGHAIRIIGWGV------ENKAPYWLIANSWNEDW 227 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCC---S--SCEEEEEEEEEEEEEE------ETTEEEEEEECSBCTTS
T ss_pred HHHHHHHHHHcCCEEEEEEeccccccccCCeeccC---C--CCCCCCeEEEEEEEee------cCCeeEEEEEeCCCCCc
Confidence 99999999999999999999 69999999999874 3 2556799999999998 77899999999999999
Q ss_pred CCCceEEEEcCCCeeccCCceeEee
Q psy2558 323 GEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 323 G~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
||+|||||+|+.|+|||++++++++
T Consensus 228 G~~Gy~~i~rg~n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 228 GENGYFRIVRGRDECSIESEVTAGR 252 (254)
T ss_dssp TBTTEEEEECSSCGGGTTSSEEEEE
T ss_pred ccCCeEEEEcCCCeecCCCceEeec
Confidence 9999999999999999999998765
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=3.6e-60 Score=436.42 Aligned_cols=209 Identities=30% Similarity=0.597 Sum_probs=185.3
Q ss_pred CCCCCceEEcccC---CCCCccCCCC---CCcchhHHHHHHHHHHHHHHHcC-C--CCCCCHHHhhhccCCCCCCCCCCh
Q psy2558 123 NITLPRAFDWREY---DAVTGVKDQT---MCGSSWAFSTTGNIEGVYAAKTK-K--LVSLSEQELIDCDQEDDGCEGGSI 193 (348)
Q Consensus 123 ~~~lP~~~Dwr~~---g~v~pv~dQg---~cgsCwAfA~~~~lE~~~~~~~~-~--~~~lS~q~l~dc~~~~~gc~GG~~ 193 (348)
..+||++||||++ ++++|||||| .||||||||++++||++++++++ . .+.||+|+|+||+. ..||+||++
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~-~~gC~GG~~ 111 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN-AGSCEGGND 111 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS-SEETBEECH
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC-CCCCCCCCH
Confidence 3468999999998 5799999999 99999999999999999999875 3 47999999999986 389999999
Q ss_pred HHHHHHHHHhcCCCccCCCcccccCCCCcccc-cc--------------ccceEEEcceEEeCcCHHHHHHHHHhCCCEE
Q psy2558 194 SNAFDTIMSKLGGGLEEEKTYPYRGDDKACRL-NK--------------KATQVKINGYVSVSRDETDMAKYLVENGPMA 258 (348)
Q Consensus 194 ~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~-~~--------------~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~ 258 (348)
..|++|+.++ ||++|++|||.+..+.|.. .. ....+++.+|..++ ++++||++|+++|||+
T Consensus 112 ~~a~~yi~~~---Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~-~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 112 LSVWDYAHQH---GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS-GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHHHT---CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC-SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHc---CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC-CHHHHHHHHHHcCCEE
Confidence 9999999988 9999999999998888873 11 11345677777776 5889999999999999
Q ss_pred EEEEcC-cCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCC--
Q psy2558 259 VAINAY-ALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDG-- 335 (348)
Q Consensus 259 v~~~~~-~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-- 335 (348)
++|++. +|++|++|||... .| ...++|||+|||||+ ++|++|||||||||++|||+|||||+|+.|
T Consensus 188 v~i~~~~~f~~Y~~GIy~~~--~~---~~~~~HaV~iVGyg~------~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~ 256 (277)
T 1deu_A 188 CGIMATERLANYTGGIYAEY--QD---TTYINHVVSVAGWGI------SDGTEYWIVRNSWGEPWGERGWLRIVTSTYKD 256 (277)
T ss_dssp EEECCCHHHHTCCSSEECBC--CS---CCCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECTTHHH
T ss_pred EEEecccccccCcCcEECCC--CC---CCcCCeEEEEEEecc------cCCccEEEEEeCCCCccCCCcEEEEEcCCCcc
Confidence 999994 8999999999874 34 456899999999998 678999999999999999999999999998
Q ss_pred ------eeccCCceeEee
Q psy2558 336 ------SCGINDYVRSAL 347 (348)
Q Consensus 336 ------~cgi~~~~~~~~ 347 (348)
.|||++++++++
T Consensus 257 g~g~~~~cgIe~~~~~~~ 274 (277)
T 1deu_A 257 GKGARYNLAIEEHCTFGD 274 (277)
T ss_dssp HTGGGTBTTTTSCEEEEE
T ss_pred cccccccceeccccEeec
Confidence 999999999886
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.6e-55 Score=404.09 Aligned_cols=210 Identities=26% Similarity=0.508 Sum_probs=168.4
Q ss_pred ceEEcccC-CCCC--ccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCCCCC-hHHHHHHHH
Q psy2558 128 RAFDWREY-DAVT--GVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCEGGS-ISNAFDTIM 201 (348)
Q Consensus 128 ~~~Dwr~~-g~v~--pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~GG~-~~~a~~~~~ 201 (348)
.-.|||+. |+++ ||||||.||||||||++++||++++++++.++.||||+|+||+. .+.||+||. +..++.+++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 35799999 6877 99999999999999999999999999988999999999999985 378999996 555578888
Q ss_pred HhcCCCccCCCcccccCC--CCccccccc-----------------cceEEEcceEEeCc-----C----HHHHHHHHHh
Q psy2558 202 SKLGGGLEEEKTYPYRGD--DKACRLNKK-----------------ATQVKINGYVSVSR-----D----ETDMAKYLVE 253 (348)
Q Consensus 202 ~~~~~Gi~~e~~yPy~~~--~~~c~~~~~-----------------~~~~~i~~~~~i~~-----~----~~~i~~~l~~ 253 (348)
++ +||++|++|||.+. .+.|+.... ....++.+|..++. + +++||++|++
T Consensus 89 ~~--Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~ 166 (265)
T 2wbf_X 89 DY--GFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMN 166 (265)
T ss_dssp HH--CCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHH
T ss_pred Hc--CCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHh
Confidence 88 35999999999863 467875321 12346777877654 3 3789999999
Q ss_pred CCCEEEEEEcCcCcccc-CceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCC--cCEEEEEcCCCCCCCCCceEEE
Q psy2558 254 NGPMAVAINAYALQFYV-TGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKA--VPYWIIKNSWGEGWGEKGYFRL 330 (348)
Q Consensus 254 ~gPv~v~~~~~~f~~y~-~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g--~~ywivkNSWG~~WG~~Gy~~i 330 (348)
+|||+++|++++|+.|+ +|++... .| +...++|||+|||||++.. ++| ++|||||||||++|||+|||||
T Consensus 167 ~GPV~v~i~~~~f~~y~~~g~~~~~--~c--~~~~~~HaV~iVGyG~~~~---~~g~~~~YWivkNSWG~~WGe~GY~ri 239 (265)
T 2wbf_X 167 KGSVIAYIKAENVMGYEFSGKKVKN--LC--GDDTADHAVNIVGYGNYVN---SEGEKKSYWIVRNSWGPYWGDEGYFKV 239 (265)
T ss_dssp HSCEEEEECGGGGCSGGGGSSSEEC--CC--CCSCCCEEEEEEEEEEEEC---TTSCEEEEEEEECSBCTTSTBTTEEEE
T ss_pred cCCEEEEEEcccccccccCCcEEcC--CC--CCCcCCEEEEEEEEeCCcc---cCCCcCCEEEEEcCCCCccCCCCEEEE
Confidence 99999999997787774 5554332 47 3557899999999997310 144 6899999999999999999999
Q ss_pred Ec-CCCeeccCCceeEe
Q psy2558 331 YR-GDGSCGINDYVRSA 346 (348)
Q Consensus 331 ~~-~~~~cgi~~~~~~~ 346 (348)
+| +.|.|||++.+.++
T Consensus 240 ~~~g~n~Cgi~~~~~~~ 256 (265)
T 2wbf_X 240 DMYGPTHCHFNFIHSVV 256 (265)
T ss_dssp ESSCCTTCSSCSCCEEE
T ss_pred EecCCCccCcceeEEEE
Confidence 97 56899977655544
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=6.7e-54 Score=397.84 Aligned_cols=229 Identities=21% Similarity=0.223 Sum_probs=179.6
Q ss_pred ccCcCCCCCHHHHHhhhhccccCCC-CCCCCCCC-CCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHH
Q psy2558 87 GLNEFSDLSTAEFQAKYLGFKLKPS-YADRSVPA-MIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYA 164 (348)
Q Consensus 87 g~N~FsDlt~~Ef~~~~~~~~~~~~-~~~~~~~~-~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~ 164 (348)
..|++.++..|.++.. ++..++++ .+...... .....+||++||||+++ ||||||.||||||||++++||++++
T Consensus 17 ~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~alE~~~~ 92 (291)
T 3ois_A 17 RGSHMQTVLKRRKKSG-YGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAIQFERI 92 (291)
T ss_dssp ------CCCCCCCCTT-CCEECCCCCTTCCBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHHHHHHH
T ss_pred chhhHhHhhhcccccc-CCCCCCCCcccccccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHHHHHHHH
Confidence 7799999999999886 45555432 22211110 11124789999999994 9999999999999999999999875
Q ss_pred HHcCCCCCCCHHHhh--hccC---CC-CCCCCCChHHHHHHHHHhcCCCccCCCcccccCCC---Cccccc---------
Q psy2558 165 AKTKKLVSLSEQELI--DCDQ---ED-DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDD---KACRLN--------- 226 (348)
Q Consensus 165 ~~~~~~~~lS~q~l~--dc~~---~~-~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~---~~c~~~--------- 226 (348)
.++..+.||+|+|+ +|.. .+ .+|.||++..|++|++++ ||++|++|||.+.. +.|...
T Consensus 93 -~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~---Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~p 168 (291)
T 3ois_A 93 -HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL---GVCPEKEWPYGDTPADPRTEEFPPGAPASKKP 168 (291)
T ss_dssp -HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT---CCCBGGGSCCCCCCCCTTTCSCCTTCGGGSCC
T ss_pred -HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh---CCCCHhhCCCCCCccccccccccccccccCCC
Confidence 46777899999998 6762 33 458899999999999998 99999999999874 456541
Q ss_pred -----cccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEc-CcCccccC--ceecCCCccCCCCCCCCCeEEEEEEec
Q psy2558 227 -----KKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINA-YALQFYVT--GVSHPIQFFCDGGNENLSHSVLIVGYG 298 (348)
Q Consensus 227 -----~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~-~~f~~y~~--Gi~~~~~~~c~~~~~~~~Hav~iVGyg 298 (348)
.....+++.+|..++.++++||++|+++|||++++++ .+|+.|++ |||..+ .|. +...++|||+|||||
T Consensus 169 ~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~--~~~-~~~~~~Hav~iVGy~ 245 (291)
T 3ois_A 169 SDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLP--TKN-DTLEGGHAVLCVGYD 245 (291)
T ss_dssp CHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCC--CTT-SCEEEEEEEEEEEEE
T ss_pred CHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCC--CCC-CCCcCCeEEEEEEEe
Confidence 1124578899999988999999999999999999999 58999998 999875 452 233469999999998
Q ss_pred CCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC
Q psy2558 299 VDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD 334 (348)
Q Consensus 299 ~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 334 (348)
+ +++|||||||||++||++|||||+|+.
T Consensus 246 ~--------~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 246 D--------EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp T--------TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred C--------CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 5 568999999999999999999999974
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=2.2e-43 Score=339.72 Aligned_cols=208 Identities=18% Similarity=0.300 Sum_probs=161.7
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHH-cCCCCCCCH----------------HHhhhccCC----
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAK-TKKLVSLSE----------------QELIDCDQE---- 184 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~dc~~~---- 184 (348)
.|..|+++....+|||+|||+||+|||||+++++|+.++++ +++.+.||+ |+++||+..
T Consensus 48 ~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~~ 127 (453)
T 2cb5_A 48 AQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPE 127 (453)
T ss_dssp CCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred CCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCCc
Confidence 36677777777799999999999999999999999999998 578999999 999999733
Q ss_pred ----------CCCCCCCChHHHHHHHHHhcCCCccCCCcccccCCC---------------------------C------
Q psy2558 185 ----------DDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDD---------------------------K------ 221 (348)
Q Consensus 185 ----------~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~---------------------------~------ 221 (348)
+.||+||.+..|+.++.++ ||+++++|||+... +
T Consensus 128 d~R~v~~l~~~~gcdGG~~~~a~~~i~ky---Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l 204 (453)
T 2cb5_A 128 DGRLVQFLLMNPANDGGQWDMLVNIVEKY---GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEI 204 (453)
T ss_dssp TSHHHHHHHHCTTCSCBCHHHHHHHHHHH---CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred chhhHHHhcCCCCCCCCChHHHHHHHHHc---CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 6899999999999999988 99999999998631 2
Q ss_pred c----------------c----------cc-------------cc-----ccceE--EEcceEE----------------
Q psy2558 222 A----------------C----------RL-------------NK-----KATQV--KINGYVS---------------- 239 (348)
Q Consensus 222 ~----------------c----------~~-------------~~-----~~~~~--~i~~~~~---------------- 239 (348)
. | .. .+ ..... .+.+|..
T Consensus 205 ~~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~ 284 (453)
T 2cb5_A 205 SATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYT 284 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeE
Confidence 1 4 22 00 00011 3344443
Q ss_pred -----------------eCcCH--HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCC------------------
Q psy2558 240 -----------------VSRDE--TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCD------------------ 282 (348)
Q Consensus 240 -----------------i~~~~--~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~------------------ 282 (348)
++.++ +.++.+|..+|||+++++++.+.++++||++.. .|+
T Consensus 285 v~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~~~~~k~GI~~~~--~~~~~~~fg~~~~~m~KaeRl 362 (453)
T 2cb5_A 285 VEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMN--LYDHELVFGVSLKNMNKAERL 362 (453)
T ss_dssp ETTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTT--SBCHHHHHSCCSCSSCHHHHH
T ss_pred EeecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeChhhccCCcEEcCc--cccchhhcCccccccCHHHHh
Confidence 33212 455688899999999999987777899999864 331
Q ss_pred -CCCCCCCeEEEEEEec--CCCCcCCCCCc-CEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEee
Q psy2558 283 -GGNENLSHSVLIVGYG--VDRTKFTHKAV-PYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 283 -~~~~~~~Hav~iVGyg--~~~~~~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
......+|||+||||| .+ ++|+ +|||||||||++||++||++|+|+ .+..+++.++
T Consensus 363 ~~~~s~~~HAmlivGyg~~~d-----~~G~~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vv 422 (453)
T 2cb5_A 363 TFGESLMTHAMTFTAVSEKDD-----QDGAFTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVV 422 (453)
T ss_dssp HTTSCCCCEEEEEEEEEECTT-----SCSCEEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEE
T ss_pred hccCCCCCeEEEEEEeccccc-----cCCCccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEE
Confidence 1134679999999999 63 4687 999999999999999999999986 4555555544
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=5.6e-42 Score=330.31 Aligned_cols=208 Identities=19% Similarity=0.262 Sum_probs=149.1
Q ss_pred CCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHH-cCCCCCCCH----------------HHhhhccC-----
Q psy2558 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAK-TKKLVSLSE----------------QELIDCDQ----- 183 (348)
Q Consensus 126 lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~dc~~----- 183 (348)
.|..|+++..+.+|||||||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+.
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46677888777899999999999999999999999999998 778999999 78899974
Q ss_pred -------CCCCCCCCChHHHHHHHHHhcCCCccCCCcccc-cCC------------------------------C-----
Q psy2558 184 -------EDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPY-RGD------------------------------D----- 220 (348)
Q Consensus 184 -------~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy-~~~------------------------------~----- 220 (348)
.+.||+||.+..++.++.++ ||++|++||| +.. .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky---Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l 209 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY---GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSII 209 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH---CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc---CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhH
Confidence 47899999999999999998 9999999999 310 0
Q ss_pred -------------------Ccccc----------------------cc------------c-------------cceEEE
Q psy2558 221 -------------------KACRL----------------------NK------------K-------------ATQVKI 234 (348)
Q Consensus 221 -------------------~~c~~----------------------~~------------~-------------~~~~~i 234 (348)
|.|+. .+ . ...+.+
T Consensus 210 ~~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~v 289 (457)
T 2e01_A 210 VTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKI 289 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEE
Confidence 01111 00 0 000111
Q ss_pred -------c----ceEEeCcCH--HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccC-----------------CCC
Q psy2558 235 -------N----GYVSVSRDE--TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFC-----------------DGG 284 (348)
Q Consensus 235 -------~----~~~~i~~~~--~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c-----------------~~~ 284 (348)
. .|..++.++ +.++.+|..++||+++++++.+++|++||++.. .| ...
T Consensus 290 e~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~~~~~~~GI~~~~--~~~~~~fg~~~~m~KaeRl~~~ 367 (457)
T 2e01_A 290 DRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIE--LWNYPAIGYNLPQQKASRIRYH 367 (457)
T ss_dssp TTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTT--SBCGGGGTCCCCCCHHHHHHTT
T ss_pred eccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCHhHcccCceeccc--ccchhhcCcccccCHHHhhccC
Confidence 0 134444332 556778899999999999988999999999753 21 012
Q ss_pred CCCCCeEEEEEEecCCCCcCCCCCc--CEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEee
Q psy2558 285 NENLSHSVLIVGYGVDRTKFTHKAV--PYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSAL 347 (348)
Q Consensus 285 ~~~~~Hav~iVGyg~~~~~~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~ 347 (348)
....+|||+|||||.+ ++|+ +|||||||||++||++||++|+|+ .+..+++.++
T Consensus 368 ~s~~~HAmlivGyg~d-----~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~iv 423 (457)
T 2e01_A 368 ESLMTAAMLITGCHVD-----ETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIV 423 (457)
T ss_dssp SCCCCEEEEEEEEEEC-----TTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEE
T ss_pred CCCCCeEEEEEEEEec-----cCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEE
Confidence 4467999999999974 4788 899999999999999999999986 5666665554
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.6e-36 Score=286.36 Aligned_cols=188 Identities=20% Similarity=0.228 Sum_probs=137.5
Q ss_pred CCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC------------CCCCCCCCChHHHHHHHHHhcC
Q psy2558 138 VTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ------------EDDGCEGGSISNAFDTIMSKLG 205 (348)
Q Consensus 138 v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~------------~~~gc~GG~~~~a~~~~~~~~~ 205 (348)
++||||||+||+|||||+++++|+.+++++++.+.||+|+|++|+. .+.||+||.+..|+.|++++
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~-- 99 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF-- 99 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT--
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc--
Confidence 7999999999999999999999999999999999999999999973 25799999999999999998
Q ss_pred CCccCCCccc------ccCC------------------C--Cc-------------------------cc---------c
Q psy2558 206 GGLEEEKTYP------YRGD------------------D--KA-------------------------CR---------L 225 (348)
Q Consensus 206 ~Gi~~e~~yP------y~~~------------------~--~~-------------------------c~---------~ 225 (348)
||++|++|| +... . .. ++ +
T Consensus 100 -Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~ 178 (383)
T 3pw3_A 100 -GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEY 178 (383)
T ss_dssp -CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEE
T ss_pred -CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCc
Confidence 999999999 2210 0 00 00 0
Q ss_pred cc----ccceEEEcc----------------------------eEEeCcC--HHHHHHHHHhCCCEEEEEEcCcCccccC
Q psy2558 226 NK----KATQVKING----------------------------YVSVSRD--ETDMAKYLVENGPMAVAINAYALQFYVT 271 (348)
Q Consensus 226 ~~----~~~~~~i~~----------------------------~~~i~~~--~~~i~~~l~~~gPv~v~~~~~~f~~y~~ 271 (348)
.| ........+ +.+++-+ ...+.++|.++.||..+.|++...+-+.
T Consensus 179 TP~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~~~ 258 (383)
T 3pw3_A 179 TPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRD 258 (383)
T ss_dssp CHHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBCTT
T ss_pred CHHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccCCC
Confidence 00 000000011 1222211 1235566777889999999964333388
Q ss_pred ceecCCCcc-----------------------------------------CCCCCCCCCeEEEEEEecCCCCcCCCCCcC
Q psy2558 272 GVSHPIQFF-----------------------------------------CDGGNENLSHSVLIVGYGVDRTKFTHKAVP 310 (348)
Q Consensus 272 Gi~~~~~~~-----------------------------------------c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ 310 (348)
||...+... -++..+..+|||+|||||.| ++|++
T Consensus 259 Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d-----~~g~~ 333 (383)
T 3pw3_A 259 GVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKD-----QEGNE 333 (383)
T ss_dssp SEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEEC-----TTCCE
T ss_pred ceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEc-----CCCce
Confidence 988432100 11123456899999999975 67889
Q ss_pred EEEEEcCCCCCCCCCceEEEEcC
Q psy2558 311 YWIIKNSWGEGWGEKGYFRLYRG 333 (348)
Q Consensus 311 ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
|||||||||++||++||++|+++
T Consensus 334 yw~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 334 YYMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEEeCCCCCCCcCCeEEecHH
Confidence 99999999999999999999875
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.75 E-value=2.1e-18 Score=134.06 Aligned_cols=74 Identities=36% Similarity=0.448 Sum_probs=64.9
Q ss_pred chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccC
Q psy2558 35 HVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLK 109 (348)
Q Consensus 35 ~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~ 109 (348)
+..+...|++|+++|+|.|.+.+|+..|+.||++|+++|++||+. ..+.++|+|+|+|||++||.+.+++.+..
T Consensus 18 ~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 18 EAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 456788999999999999998899999999999999999999975 34556699999999999999998876643
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.71 E-value=1.2e-17 Score=124.09 Aligned_cols=67 Identities=24% Similarity=0.399 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCC--ccccccCcCCCCCHHHHHhhhhccc
Q psy2558 39 TALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHG--SGVYGLNEFSDLSTAEFQAKYLGFK 107 (348)
Q Consensus 39 ~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~--~~~~g~N~FsDlt~~Ef~~~~~~~~ 107 (348)
...|++|+.+|+|+|.+.+|+..| .||++|++.|++||+. ..+ +.++|+|+|+|||++|| +.+++.+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 467999999999999878899999 9999999999999963 233 34459999999999999 8777654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.75 E-value=0.00075 Score=55.82 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=92.6
Q ss_pred CCCCCCcchhHHHHHHHHHHHHH--------HHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcCCCccCCCc
Q psy2558 142 KDQTMCGSSWAFSTTGNIEGVYA--------AKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKT 213 (348)
Q Consensus 142 ~dQg~cgsCwAfA~~~~lE~~~~--------~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~ 213 (348)
..||.-+=|-+|+.++.|-+... +.+...+.+|+++|.+ .|..+.+.++|++.+ |-.+
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~--------t~~~~~q~Iky~~s~---G~~~--- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ---GRDI--- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG--------CCBCHHHHHHHHHHT---TCCC---
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHc---CcCh---
Confidence 56999999999999988876542 1112247788888877 367799999999877 4221
Q ss_pred ccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEE
Q psy2558 214 YPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVL 293 (348)
Q Consensus 214 yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~ 293 (348)
.+ ..-..+-+.+++.+.++.|+.+...- +.... .....+|||+
T Consensus 91 -----------------~~-----~nr~ls~neV~~~i~~Nk~I~v~~~~---------v~e~~------~~~~~gHA~a 133 (183)
T 1pxv_A 91 -----------------HY-----QEGVPSYNQVDQLTKDNVGIMILAQS---------VSQNP------NDPHLGHALA 133 (183)
T ss_dssp -----------------EE-----EESCCCHHHHHHHHHTTCCEEEEEEC---------CCSST------TSCCCEEEEE
T ss_pred -----------------hH-----hcCCCCHHHHHHHHhcCCcEEEEccc---------cccCC------CCccCceeEE
Confidence 01 11122677899999999999988752 21111 2446799999
Q ss_pred EEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCCC
Q psy2558 294 IVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDG 335 (348)
Q Consensus 294 iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~ 335 (348)
||||-. .++.++.+|=|=|-. |++-++-+.+
T Consensus 134 v~Gya~------~~~~~~y~~WNPW~~-----~~~~~~a~S~ 164 (183)
T 1pxv_A 134 VVGNAK------INDQEKLIYWNPWDT-----ELSIQDADSS 164 (183)
T ss_dssp EEEEEE------ETTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred EEeeee------cCCCeEEEEeCCccC-----CcEeecCCCC
Confidence 999987 668889999888754 6777665543
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.29 E-value=0.0031 Score=57.63 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=89.2
Q ss_pred CCCCCCcchhHHHHHHHHHHHHH--------HHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcCCCccCCCc
Q psy2558 142 KDQTMCGSSWAFSTTGNIEGVYA--------AKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKT 213 (348)
Q Consensus 142 ~dQg~cgsCwAfA~~~~lE~~~~--------~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~ 213 (348)
..||.-+=|-+||.++.|-+... +.+...+.+|+++|.+ .|..+.+.++|++.+ |...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~--------ts~~~~q~Iky~qsy---G~~~--- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ---GRDI--- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG--------CCCCHHHHHHHHHHT---TEEE---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHh---Ccch---
Confidence 56999999999999988875441 1112246788888877 367799999999866 4321
Q ss_pred ccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEE
Q psy2558 214 YPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVL 293 (348)
Q Consensus 214 yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~ 293 (348)
.+..-..+-+.+++.+..+.|+.+.++.. ... - .....+|||+
T Consensus 267 ----------------------~~~n~~ls~deVk~~id~Nk~I~v~~~~v---------~~~----~--n~~~~gHAla 309 (367)
T 1x9y_A 267 ----------------------HYQEGVPSYNQVDQLTKDNVGIMILAQSV---------SQN----P--NDPHLGHALA 309 (367)
T ss_dssp ----------------------EEEESCCCHHHHHHHHHTTCCEEEEEEET---------TSC----S--SSCCCSEEEE
T ss_pred ----------------------hhhcCCCCHHHHHHHHhcCCcEEEEcccc---------ccC----C--CCccCceeEE
Confidence 11111126778999999999999888641 000 0 2446799999
Q ss_pred EEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC
Q psy2558 294 IVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD 334 (348)
Q Consensus 294 iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 334 (348)
||||-. .++.+|.++-|=|-.+ ++-++-..
T Consensus 310 vvGyA~------~~~~~~y~~WNPW~~~-----~~~~sa~S 339 (367)
T 1x9y_A 310 VVGNAK------INDQEKLIYWNPWDTE-----LSIQDADS 339 (367)
T ss_dssp EEEEEE------ETTEEEEEEECTTCSS-----CEEEETTC
T ss_pred EEeccc------cCCCcEEEEecCccCC-----ceeecCCC
Confidence 999965 4478899997777543 56555433
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.23 E-value=0.0054 Score=50.61 Aligned_cols=122 Identities=13% Similarity=0.126 Sum_probs=84.6
Q ss_pred CCCCCCcchhHHHHHHHHHHHHH--------HHcCCCCCCCHHHhhhccCCCCCCCCCChHHHHHHHHHhcCCCccCCCc
Q psy2558 142 KDQTMCGSSWAFSTTGNIEGVYA--------AKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKT 213 (348)
Q Consensus 142 ~dQg~cgsCwAfA~~~~lE~~~~--------~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~ 213 (348)
..||.-+=|-+|+.++.|-+... +.+...+.+|+++|..+ |..+.+.++|+++. |-..
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~--------~~t~~e~iky~~s~---g~~~--- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT--------GLTPREMIYFGQTQ---GRSP--- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC--------CCCHHHHHHHHHHT---TCCC---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc--------CCCHHHHHHHHHHc---CCCh---
Confidence 46999999999999998876542 11122578999999854 56688999998887 3210
Q ss_pred ccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEE
Q psy2558 214 YPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVL 293 (348)
Q Consensus 214 yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~ 293 (348)
.+..-..+.+.+++.+.++.|+.+..+--. . + .....+|||+
T Consensus 82 ----------------------~~~n~~ls~~eV~~~~~~nk~i~i~~~~ve----------~-~-----~~~~~gHAla 123 (174)
T 1cv8_A 82 ----------------------QLLNRMTTYNEVDNLTKNNKGIAILGSRVE----------S-R-----NGMHAGHAMA 123 (174)
T ss_dssp ----------------------EEESSCCCHHHHHHHHHTTCCEEEEEEESS----------C-B-----TTBCCEEEEE
T ss_pred ----------------------hhhcCCCCHHHHHHHHhcCCceEEEccccc----------C-C-----CCCCCceeEE
Confidence 000001257789999999999988775310 0 0 1345689999
Q ss_pred EEEecCCCCcCCCCCcCEEEEEcCCCC
Q psy2558 294 IVGYGVDRTKFTHKAVPYWIIKNSWGE 320 (348)
Q Consensus 294 iVGyg~~~~~~~~~g~~ywivkNSWG~ 320 (348)
||||-.- .+|.+|.++=|=|-.
T Consensus 124 v~Gy~~~-----~ng~~~y~~WNPW~~ 145 (174)
T 1cv8_A 124 VVGNAKL-----NNGQEVIIIWNPWDN 145 (174)
T ss_dssp EEEEEEE-----TTSCEEEEEECTTCS
T ss_pred EEeeeee-----cCCceEEEEeCCccC
Confidence 9999862 467799999888753
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=85.66 E-value=2.1 Score=37.38 Aligned_cols=51 Identities=18% Similarity=0.318 Sum_probs=34.0
Q ss_pred EeCc-CHHHHHHHHHhCCCEEEEEEcCcCcc--------c--cCceecCCCccCCCCCCCCCeEEEEEEecC
Q psy2558 239 SVSR-DETDMAKYLVENGPMAVAINAYALQF--------Y--VTGVSHPIQFFCDGGNENLSHSVLIVGYGV 299 (348)
Q Consensus 239 ~i~~-~~~~i~~~l~~~gPv~v~~~~~~f~~--------y--~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~ 299 (348)
.++. +.++|++.|.++.||+|-+.. .|.- + .+|-.. ....+|+|+|+||+.
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~-~~~p~~~~~~~~W~~~~G~~~---------~~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNA-TFAPLDEDEFTTWETNNGDVS---------ITYNEHCVVLIGYDQ 187 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEET-TSSCCCGGGCEEEEETTEEEE---------ECTTEEEEEEEEECS
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeC-CcccccccccceeecCCCcee---------eccCCeEEEEEEEeC
Confidence 3444 789999999999999998765 2211 1 112111 123589999999986
No 50
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=67.69 E-value=12 Score=34.75 Aligned_cols=54 Identities=24% Similarity=0.398 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCC
Q psy2558 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGE 324 (348)
Q Consensus 245 ~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~ 324 (348)
+.|++.|.++.||.+.-. ...++||.+|=||.. .+||-|==.||-. .
T Consensus 290 ~~i~~eL~~~rPV~~~G~----------------------~~~gGHAfV~DGy~~---------~~~~H~NwGWgG~--~ 336 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGV----------------------GKVGGHAFVIDGADG---------RNFYHVNWGWGGV--S 336 (371)
T ss_dssp HHHHHHHHTTCCEEEEEE----------------------ETTEEEEEEEEEECS---------SSEEEEECSSTTT--T
T ss_pred HHHHHHHHcCCCEEEEee----------------------cCCCceEEEECcccC---------CCeEEEEeCcCCC--C
Confidence 468889999999975432 111799999999985 2577774444432 5
Q ss_pred CceEEEE
Q psy2558 325 KGYFRLY 331 (348)
Q Consensus 325 ~Gy~~i~ 331 (348)
+||+.+.
T Consensus 337 nGyy~l~ 343 (371)
T 1dki_A 337 DGFFRLD 343 (371)
T ss_dssp CEEEESC
T ss_pred Ccceecc
Confidence 8999985
No 51
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=67.48 E-value=12 Score=34.18 Aligned_cols=59 Identities=15% Similarity=0.304 Sum_probs=38.5
Q ss_pred HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCC
Q psy2558 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGE 324 (348)
Q Consensus 245 ~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~ 324 (348)
+.|++.|.++.||.+.-.-... . ...++||.+|=||.. .+||-|==.||-. .
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~~~------~-----------~~~~GHafV~DGY~~---------~~~~H~NwGWgG~--~ 290 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSPGS------M-----------GQDAGHAFVIDGYNK---------AGLVSVNWGWNGD--V 290 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC------------------------CCCEEEEEEEECT---------TSCEEEECSSTTT--T
T ss_pred HHHHHHHHhCCCEEEEEecCCC------C-----------CCCCceEEEEccccC---------CCeEEEecCCCCC--C
Confidence 4688999999998765421110 0 124699999999985 2577775455422 3
Q ss_pred CceEEEE
Q psy2558 325 KGYFRLY 331 (348)
Q Consensus 325 ~Gy~~i~ 331 (348)
+||+.+.
T Consensus 291 nGyy~l~ 297 (321)
T 3bb7_A 291 DGYYKID 297 (321)
T ss_dssp CEEECCT
T ss_pred CceEecc
Confidence 8999885
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=58.01 E-value=17 Score=32.12 Aligned_cols=54 Identities=24% Similarity=0.388 Sum_probs=38.0
Q ss_pred HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCC
Q psy2558 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGE 324 (348)
Q Consensus 245 ~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~ 324 (348)
+.|+++|.++.||.++-. ...++||.+|=||..+ +|+-|==.|| =-.
T Consensus 172 ~~I~~eL~~grPV~~~G~----------------------~~~gGHAwViDGY~~~---------~~~H~NwGWg--G~~ 218 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGV----------------------GKVGGHAFVIDGADGR---------NFYHVNWGWG--GVS 218 (261)
T ss_dssp HHHHHHHHTTCCEEEEEE----------------------ETTEEEEEEEEEEESS---------SCEEEECSST--TTT
T ss_pred HHHHHHHHcCCCEEEEee----------------------cCCCceEEEEcccccC---------CEEEEEcCCC--CCC
Confidence 578899999999987652 1236899999999852 5666643333 125
Q ss_pred CceEEEE
Q psy2558 325 KGYFRLY 331 (348)
Q Consensus 325 ~Gy~~i~ 331 (348)
+||+.+.
T Consensus 219 nGYy~l~ 225 (261)
T 4d8b_A 219 DGFFRLD 225 (261)
T ss_dssp CEEECTT
T ss_pred Cceeecc
Confidence 8999885
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=27.91 E-value=1.3e+02 Score=27.25 Aligned_cols=72 Identities=19% Similarity=0.225 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCEEEEEEcCcCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCC----CCcCEEEEEcCCC-
Q psy2558 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTH----KAVPYWIIKNSWG- 319 (348)
Q Consensus 245 ~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~----~g~~ywivkNSWG- 319 (348)
+.|++++..+.++++++.+..-.... .....+-..+||-.|++... . .+...-.|||-||
T Consensus 211 ~~l~~~~~~g~l~~~s~~~t~~~~~~---------~~~~~GLv~~HaYsVl~v~~------v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 211 QIILKALERGSLLGCSINISDIRDLE---------AITFKNLVRGHAYSVTDAKQ------VTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSSSTTC---------SBCTTSCBTTCCEEEEEEEE------EEETTEEEEEEEEECTTSC
T ss_pred HHHHHHHHCCCeEEEEecCCCccchh---------hhhccCCcCCceEEEeEEEE------EecCCCceEEEEEeCCCCC
Q ss_pred CCCC-------------------------CCceEEEE
Q psy2558 320 EGWG-------------------------EKGYFRLY 331 (348)
Q Consensus 320 ~~WG-------------------------~~Gy~~i~ 331 (348)
..|- ++|-|||+
T Consensus 276 ~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 276 VEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp CCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred ccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
Done!