RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2558
(348 letters)
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 194 bits (492), Expect = 2e-61
Identities = 104/222 (46%), Positives = 139/222 (62%), Gaps = 10/222 (4%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
P +DWR AVT VKDQ MCGS WAFS TGN+EG + L+SLSEQEL+DCD+ D
Sbjct: 2 PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDK 61
Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETD 246
C GG SNA+ I + GGLE E Y Y+G ++C+ + + +V I V +S++E
Sbjct: 62 ACMGGLPSNAYSAIKNL--GGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQK 119
Query: 247 MAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTH 306
+A +L + GP++VAINA+ +QFY G+S P + H+VL+VGYG
Sbjct: 120 LAAWLAKRGPISVAINAFGMQFYRHGISRP--LRPLCSPWLIDHAVLLVGYG------QR 171
Query: 307 KAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348
VP+W IKNSWG WGEKGY+ L+RG G+CG+N SA+V
Sbjct: 172 SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 193 bits (491), Expect = 5e-60
Identities = 104/310 (33%), Positives = 162/310 (52%), Gaps = 14/310 (4%)
Query: 40 ALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLL-QDTEHGSGVY--GLNEFSDLST 96
A + + HN+ Y E R ++ N++ I+L Q+ G + +N F D+++
Sbjct: 10 AQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTS 68
Query: 97 AEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTT 156
EF+ GF+ + + + PR+ DWRE VT VK+Q CGS WAFS T
Sbjct: 69 EEFRQVMNGFQNRKPRKGKVFQEPL-FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSAT 127
Query: 157 GNIEGVYAAKTKKLVSLSEQELIDCD--QEDDGCEGGSISNAFDTIMSKLGGGLEEEKTY 214
G +EG KT +L+SLSEQ L+DC Q ++GC GG + AF + GGL+ E++Y
Sbjct: 128 GALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN--GGLDSEESY 185
Query: 215 PYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVS 274
PY +++C+ N K + G+V + + E + K + GP++VAI+A F
Sbjct: 186 PYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEG 245
Query: 275 HPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRG- 333
+ C +E++ H VL+VGYG + T+ + YW++KNSWGE WG GY ++ +
Sbjct: 246 IYFEPDC--SSEDMDHGVLVVGYGFESTESDNN--KYWLVKNSWGEEWGMGGYVKMAKDR 301
Query: 334 DGSCGINDYV 343
CGI
Sbjct: 302 RNHCGIASAA 311
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 186 bits (473), Expect = 1e-57
Identities = 72/314 (22%), Positives = 115/314 (36%), Gaps = 24/314 (7%)
Query: 41 LFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQ 100
F + + NK+YAT + + F +++ +Q +G + N SDLS EF+
Sbjct: 4 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQ-----SNGGAI---NHLSDLSLDEFK 55
Query: 101 AKYLGFKLKPSY------ADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFS 154
++L + + A N P D R+ VT ++ Q CGS+WAFS
Sbjct: 56 NRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFS 115
Query: 155 TTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTY 214
E Y A + + L+EQEL+DC + G+ +E Y
Sbjct: 116 GVAATESAYLAYRDQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQH----NGVVQESYY 171
Query: 215 PYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVS 274
Y +++CR N + + + L + I
Sbjct: 172 RYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD 231
Query: 275 HPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD 334
D G + H+V IVGY + V YWI++NSW WG+ GY
Sbjct: 232 GRTIIQRDNGYQPNYHAVNIVGYSNA------QGVDYWIVRNSWDTNWGDNGYGYFAANI 285
Query: 335 GSCGINDYVRSALV 348
I +Y ++
Sbjct: 286 DLMMIEEYPYVVIL 299
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 179 bits (453), Expect = 1e-55
Identities = 86/222 (38%), Positives = 116/222 (52%), Gaps = 16/222 (7%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
LP + DWRE AV VK+Q CGS WAFST +EG+ T L+SLSEQ+L+DC +
Sbjct: 1 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTAN 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDET 245
GC GG ++ AF I++ GG+ E+TYPYRG D C A V I+ Y +V
Sbjct: 61 HGCRGGWMNPAFQFIVNN--GGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNE 118
Query: 246 DMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFT 305
+ V N P++V ++A F + N H++ +VGYG + K
Sbjct: 119 QSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN----HALTVVGYGTENDK-- 172
Query: 306 HKAVPYWIIKNSWGEGWGEKGYFRLYRG----DGSCGINDYV 343
+WI+KNSWG+ WGE GY R R DG CGI +
Sbjct: 173 ----DFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFA 210
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 168 bits (426), Expect = 9e-52
Identities = 84/220 (38%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
LP DWR+ AVT VK+Q CGS WAFST +E + +T L+SLSEQEL+DCD+++
Sbjct: 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKN 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDET 245
GC GG+ A+ I++ GG++ + YPY+ C+ K I+GY V
Sbjct: 61 HGCLGGAFVFAYQYIINN--GGIDTQANYPYKAVQGPCQAASKVV--SIDGYNGVPFCNE 116
Query: 246 DMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFT 305
K V P VAI+A + QF N H V IVGY +
Sbjct: 117 XALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLN----HGVTIVGYQAN----- 167
Query: 306 HKAVPYWIIKNSWGEGWGEKGYFRLYRGDGS--CGINDYV 343
YWI++NSWG WGEKGY R+ R G CGI
Sbjct: 168 -----YWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLP 202
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 169 bits (427), Expect = 1e-51
Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELID---CD 182
LP + DWRE VT VK Q CG+ WAFS G +E KT KLVSLS Q L+D
Sbjct: 1 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60
Query: 183 QEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR 242
+ GC GG ++ AF I+ G++ + +YPY+ D+ C+ + K + Y +
Sbjct: 61 YGNKGCNGGFMTTAFQYIIDN--KGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPY 118
Query: 243 D-ETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDR 301
E + + + GP++V ++A F++ + C +N++H VL+VGYG
Sbjct: 119 GREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC---TQNVNHGVLVVGYG--- 172
Query: 302 TKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRG-DGSCGINDYV 343
YW++KNSWG +GE+GY R+ R CGI +
Sbjct: 173 ---DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFP 212
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 170 bits (430), Expect = 1e-51
Identities = 62/262 (23%), Positives = 98/262 (37%), Gaps = 52/262 (19%)
Query: 126 LPRAFDWRE----YDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVS--LSEQELI 179
LP +FD RE + ++DQ CGS WAF I T VS +S ++L+
Sbjct: 2 LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLL 61
Query: 180 DC--DQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRG----DDKACRLNKKATQVK 233
C DGC GG + A++ K G + + G C + ++
Sbjct: 62 TCCGSMCGDGCNGGYPAEAWNFWTRK--GLVSGGLYESHVGCRPYSIPPCEHHVNGSRPP 119
Query: 234 INGYVSV----------------------------SRDETDMAKYLVENGPMAVAINAYA 265
G S E D+ + +NGP+ A + Y+
Sbjct: 120 CTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYS 179
Query: 266 LQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEK 325
+ G H++ I+G+GV+ PYW++ NSW WG+
Sbjct: 180 DFLLYKSGVYQHVTGEMMGG----HAIRILGWGVE------NGTPYWLVANSWNTDWGDN 229
Query: 326 GYFRLYRGDGSCGINDYVRSAL 347
G+F++ RG CGI V + +
Sbjct: 230 GFFKILRGQDHCGIESEVVAGI 251
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 168 bits (425), Expect = 2e-51
Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 123 NITLPRAFDWREYDA-VTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDC 181
+ T P + DWR+ V+ VK+Q CGS W FSTTG +E A T K++SL+EQ+L+DC
Sbjct: 6 SATYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDC 65
Query: 182 --DQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVS 239
+ + GC+GG S AF+ I G+ E TYPY+G D C+ + +
Sbjct: 66 AQNFNNHGCQGGLPSQAFEYIRYN--KGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVAN 123
Query: 240 -VSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYG 298
DE M + + P++ A + C + ++H+VL VGYG
Sbjct: 124 ITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIY-SSTSCHKTPDKVNHAVLAVGYG 182
Query: 299 VDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYV 343
+PYWI+KNSWG WG GYF + RG CG+
Sbjct: 183 ------EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACA 221
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 167 bits (422), Expect = 5e-51
Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 12/219 (5%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
P + D+R+ VT VK+Q CGS WAFS+ G +EG KT KL++LS Q L+DC E+D
Sbjct: 2 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 61
Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVS-VSRDET 245
GC GG ++NAF + G++ E YPY G +++C N K GY +E
Sbjct: 62 GCGGGYMTNAFQYVQKN--RGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 119
Query: 246 DMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFT 305
+ + + GP++VAI+A F C ++NL+H+VL VGYG
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESC--NSDNLNHAVLAVGYG------I 171
Query: 306 HKAVPYWIIKNSWGEGWGEKGYFRLYRG-DGSCGINDYV 343
K +WIIKNSWGE WG KGY + R + +CGI +
Sbjct: 172 QKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 210
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 166 bits (420), Expect = 1e-50
Identities = 80/223 (35%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
P++ DWR AVT VK+Q CGS WAFST +EG+ T L+ LSEQEL+DCD+
Sbjct: 2 PQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSY 61
Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETD 246
GC+GG + + G + K +K +VKI GY V +
Sbjct: 62 GCKGGYQTTSLQ--YVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCET 119
Query: 247 MAKYLVENGPMAVAINAYA--LQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKF 304
+ N P++V + A Q Y +GV L H+V VGYG K
Sbjct: 120 SFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGT------KLDHAVTAVGYGTSDGK- 172
Query: 305 THKAVPYWIIKNSWGEGWGEKGYFRLYRGDGS----CGINDYV 343
Y IIKNSWG WGEKGY RL R G+ CG+
Sbjct: 173 -----NYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSS 210
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 165 bits (418), Expect = 5e-50
Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 16/230 (6%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
A+DWR + VT VKDQ CGS WAFS+ G++E YA + KL++LSEQEL+DC ++
Sbjct: 19 HAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNY 78
Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETD 246
GC GG I+NAF+ ++ GG + C +++ + I Y+SV ++
Sbjct: 79 GCNGGLINNAFEDMIEL-GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLK 137
Query: 247 MAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTK--- 303
A + ++VA++ FY G+ + L+H+V++VG+G+
Sbjct: 138 EALRFLGPISISVAVSD-DFAFYKEGIFDGECG------DQLNHAVMLVGFGMKEIVNPL 190
Query: 304 -FTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYVRSALV 348
+ Y+IIKNSWG+ WGE+G+ + + CG+ L+
Sbjct: 191 TKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 164 bits (416), Expect = 6e-50
Identities = 94/225 (41%), Positives = 121/225 (53%), Gaps = 17/225 (7%)
Query: 125 TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQE 184
T+P + DWR+ AVT VKDQ CGS WAFST +EG+ KT KLVSLSEQEL+DCD +
Sbjct: 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD 60
Query: 185 DDG-CEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVSR 242
+ C GG + AF+ I + GG+ E YPY D C ++K+ A V I+G+ +V
Sbjct: 61 QNQGCNGGLMDYAFEFIKQR--GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPE 118
Query: 243 DETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRT 302
++ + V N P++VAI+A F F L H V IVGYG
Sbjct: 119 NDENALLKAVANQPVSVAIDAGGSDFQFYSEGV----FTGSCGTELDHGVAIVGYGTT-- 172
Query: 303 KFTHKAVPYWIIKNSWGEGWGEKGYFRLYRG----DGSCGINDYV 343
YW +KNSWG WGEKGY R+ RG +G CGI
Sbjct: 173 ---IDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEA 214
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 162 bits (410), Expect = 3e-49
Identities = 88/224 (39%), Positives = 127/224 (56%), Gaps = 14/224 (6%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQE- 184
LP++ DWR+ VT VK+Q CGS WAFS TG +EG KT KLVSLSEQ L+DC +
Sbjct: 1 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 60
Query: 185 -DDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGY-VSVSR 242
+ GC GG ++ AF + GGL+ E++YPY D+ C+ + + + G+ V
Sbjct: 61 GNQGCNGGFMARAFQYVKEN--GGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPG 118
Query: 243 DETDMAKYLVENGPMAVAINAY--ALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVD 300
E + K + GP++VA++A + QFY +G I F D ++NL H VL+VGYG +
Sbjct: 119 KEKALMKAVATVGPISVAMDAGHSSFQFYKSG----IYFEPDCSSKNLDHGVLVVGYGFE 174
Query: 301 RTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRG-DGSCGINDYV 343
+ YW++KNSWG WG GY ++ + + CGI
Sbjct: 175 GANSDNS--KYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAA 216
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 162 bits (410), Expect = 3e-49
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
LP DWR AV +K+Q CGS WAFS +E + +T +L+SLSEQEL+DCD
Sbjct: 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTAS 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDET 245
GC GG ++NAF I++ GG++ ++ YPY +C+ + V ING+ V+R+
Sbjct: 61 HGCNGGWMNNAFQYIITN--GGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNE 117
Query: 246 DMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFT 305
+ V + P++V + A F N H V+IVGYG T
Sbjct: 118 SALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN----HGVVIVGYG------T 167
Query: 306 HKAVPYWIIKNSWGEGWGEKGYFRLYRG----DGSCGINDYV 343
YWI++NSWG+ WG +GY + R G CGI
Sbjct: 168 QSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLP 209
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 162 bits (409), Expect = 4e-49
Identities = 89/225 (39%), Positives = 121/225 (53%), Gaps = 15/225 (6%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
P A DWR AVT VKDQ CGS WAFS GN+E + L +LSEQ L+ CD+ D
Sbjct: 2 PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61
Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKA---CRLNKKATQVKINGYVSVSRD 243
GC GG ++NAF+ I+ + G + E +YPY + C + I G+V + +D
Sbjct: 62 GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQD 121
Query: 244 ETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTK 303
E +A +L NGP+AVA++A + + +E L H VL+VGY
Sbjct: 122 EAQIAAWLAVNGPVAVAVDASSWMT------YTGGVMTSCVSEQLDHGVLLVGYNDS--- 172
Query: 304 FTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348
AVPYWIIKNSW WGE+GY R+ +G C + + SA+V
Sbjct: 173 ---AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 161 bits (408), Expect = 5e-49
Identities = 78/223 (34%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
+P DWR+ AVT VK+Q CGS WAFS IEG+ +T L SEQEL+DCD+
Sbjct: 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRS 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLN-KKATQVKINGYVSVSRDE 244
GC GG +A + G+ TYPY G + CR K K +G V
Sbjct: 61 YGCNGGYPWSALQLVAQY---GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYN 117
Query: 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKF 304
Y + N P++V + A F + + + + H+V VGYG +
Sbjct: 118 EGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD----HAVAAVGYGPN---- 169
Query: 305 THKAVPYWIIKNSWGEGWGEKGYFRLYRGD----GSCGINDYV 343
Y +IKNSWG GWGE GY R+ RG G CG+
Sbjct: 170 ------YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSS 206
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 161 bits (407), Expect = 8e-49
Identities = 70/222 (31%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
LP DWR+ AVT V+ Q CGS WAFS +EG+ +T KLV LSEQEL+DC++
Sbjct: 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDET 245
GC+GG A + + G K VK +G V +
Sbjct: 61 HGCKGGYPPYALEYVAKN--GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNE 118
Query: 246 DMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFT 305
+ P++V + + F + + H+V VGYG K
Sbjct: 119 GNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD----HAVTAVGYGKSGGK-- 172
Query: 306 HKAVPYWIIKNSWGEGWGEKGYFRLYRGDGS----CGINDYV 343
Y +IKNSWG WGEKGY R+ R G+ CG+
Sbjct: 173 ----GYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSS 210
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 159 bits (403), Expect = 5e-48
Identities = 72/232 (31%), Positives = 99/232 (42%), Gaps = 14/232 (6%)
Query: 126 LPRAFDWREYDA---VTGVKDQTMCGSSWAFSTTGNIEGVYAAKTK--KLVSLSEQELID 180
LP ++DWR V+ V++Q CGS ++F++ G +E T + LS QE++
Sbjct: 1 LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS 60
Query: 181 CDQEDDGCEGGSISNAFDTIMSKLGGGLEEE---KTYPYRGDDKACRLNKKATQVKINGY 237
C Q GCEGG G E K +++ G
Sbjct: 61 CSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGG 120
Query: 238 VSVSRDETDMAKYLVENGPMAVAINAYALQFYVTG--VSHPIQFFCDGGNENLSHSVLIV 295
+E M LV +GPMAVA Y + H E +H+VL+V
Sbjct: 121 FYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLV 180
Query: 296 GYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSAL 347
GYG D + + YWI+KNSWG GWGE GYFR+ RG C I +A
Sbjct: 181 GYGTD----SASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 228
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 155 bits (392), Expect = 2e-46
Identities = 73/222 (32%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
LP DWR AV +K Q CG WAFS +EG+ T L+SLSEQELIDC +
Sbjct: 1 LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQ 60
Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRG-DDKACRLNKKATQVKINGYVSVSRDE 244
+ GG+ E+ YPY D + + V I+ Y +V +
Sbjct: 61 NTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNN 120
Query: 245 TDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKF 304
+ V P++VA++A F F + H+V IVGYG +
Sbjct: 121 EWALQTAVTYQPVSVALDAAGDAFKQYSSGI----FTGPCGTAIDHAVTIVGYGTE---- 172
Query: 305 THKAVPYWIIKNSWGEGWGEKGYFRLYR---GDGSCGINDYV 343
+ YWI+KNSW WGE+GY R+ R G G+CGI
Sbjct: 173 --GGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMP 212
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 141 bits (355), Expect = 2e-40
Identities = 60/245 (24%), Positives = 93/245 (37%), Gaps = 39/245 (15%)
Query: 120 MIPNITLPRAFDWREYDAV---TGVKDQTM---CGSSWAFSTTGNIEGVYAAKTKKL--- 170
+ LP+++DWR D V + ++Q + CGS WA ++T + K K
Sbjct: 28 YLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPS 87
Query: 171 VSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLN---- 226
LS Q +IDC G +S + +E Y+ D+ C
Sbjct: 88 TLLSVQNVIDCGNAGSCEGGNDLSVWDYAHQHGI----PDETCNNYQAKDQECDKFNQCG 143
Query: 227 -----------KKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSH 275
+ T ++ Y S+S E M + NGP++ I A TG +
Sbjct: 144 TCNEFKECHAIRNYTLWRVGDYGSLSGRE-KMMAEIYANGPISCGIMATERLANYTGGIY 202
Query: 276 PIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDG 335
N H V + G+G+ YWI++NSWGE WGE+G+ R+
Sbjct: 203 AEYQDTTYIN----HVVSVAGWGIS------DGTEYWIVRNSWGEPWGERGWLRIVTSTY 252
Query: 336 SCGIN 340
G
Sbjct: 253 KDGKG 257
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 53.0 bits (127), Expect = 2e-08
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 244 ETDMAKYL-VENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRT 302
+ K++ + G M + + Y Y + ++H++LI G VD T
Sbjct: 329 GSHTPKFMDKKTGVMDIELWNYPAIGYNLPQQKASRI--RYHESLMTHAMLITGCHVDET 386
Query: 303 KFTHKAVPYWIIKNSWGEGWGEKGYF 328
K + ++NSWG+ G+ G +
Sbjct: 387 ---SKLPLRYRVENSWGKDSGKDGLY 409
Score = 26.1 bits (57), Expect = 7.2
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 138 VTGVKDQTMCGSSWAFSTTGNIEGVYAAKT-KKLVSLSE 175
T V +Q G +W F+ T + ++ K LS+
Sbjct: 66 STPVTNQKSSGRAWLFAATNQLRLNVLSELNLKEFELSQ 104
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 44.9 bits (106), Expect = 1e-05
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 245 TDMAKYLV-ENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTK 303
D+ K+ + G + + + L F V+ + G ++H++ +
Sbjct: 325 CDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQ 384
Query: 304 FTHKAVPYWIIKNSWGEGWGEKGYF 328
A W ++NSWGE G KGY
Sbjct: 385 --DGAFTKWRVENSWGEDHGHKGYL 407
>d1nrza_ c.38.1.1 (A:) Sorbose permease subunit IIb , EIIb-sor
{Klebsiella pneumoniae [TaxId: 573]}
Length = 163
Score = 26.6 bits (59), Expect = 2.7
Identities = 4/31 (12%), Positives = 13/31 (41%)
Query: 225 LNKKATQVKINGYVSVSRDETDMAKYLVENG 255
+ + + ++ VS+ + + L + G
Sbjct: 107 MAWRPGKKQLTKAVSLDPQDIQAFRELDKLG 137
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus
subtilis [TaxId: 1423]}
Length = 161
Score = 26.7 bits (59), Expect = 2.9
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 225 LNKKATQVKINGYVSVSRDETDMAKYLVENG 255
+ + + +I VSV+ + + L + G
Sbjct: 107 MRFENHRRQITKSVSVTEQDIKAFETLSDKG 137
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 110
Score = 25.1 bits (55), Expect = 7.8
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 266 LQFYVTGVSHPIQFFCDGGN--ENLSHSVLIVGY 297
LQ + G P+ EN++ LI GY
Sbjct: 63 LQLKIAGAPEPLTVTAPSLTIAENMAD--LIDGY 94
>d1hyrc2 d.19.1.1 (C:0-180) Class I MHC homolog {Human (Homo
sapiens), Mic-a [TaxId: 9606]}
Length = 181
Score = 25.3 bits (55), Expect = 8.8
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 18/64 (28%)
Query: 261 INAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKF------THKAVPY--W 312
+ ++L++ +T +S L + +D F +A P W
Sbjct: 1 MEPHSLRYNLTVLSWDGSVQ---------SGFLTEVH-LDGQPFLRCDRQKCRAKPQGQW 50
Query: 313 IIKN 316
Sbjct: 51 AEDV 54
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,314,512
Number of extensions: 60583
Number of successful extensions: 198
Number of sequences better than 10.0: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 34
Length of query: 348
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 262
Effective length of database: 1,226,816
Effective search space: 321425792
Effective search space used: 321425792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.9 bits)