BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2560
(215 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G++TT+ V S+ +Y L HP++Q+K+ +E ++V P T T+ M+YL+ + E++R
Sbjct: 284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 343
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK- 163
L+P + R ++ M +P G + I + HR P+Y+ P +F P+RF +K K
Sbjct: 344 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 403
Query: 164 --HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
PY Y PF +GPRNCIG + A+M+ K+ + ++L+ +
Sbjct: 404 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 441
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G++TT+ V S+ +Y L HP++Q+K+ +E ++V P T T+ M+YL+ + E++R
Sbjct: 285 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 344
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK- 163
L+P + R ++ M +P G + I + HR P+Y+ P +F P+RF +K K
Sbjct: 345 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 404
Query: 164 --HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
PY Y PF +GPRNCIG + A+M+ K+ + ++L+ +
Sbjct: 405 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 442
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G++TT+ V S+ +Y L HP++Q+K+ +E ++V P T T+ M+YL+ + E++R
Sbjct: 286 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 345
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK- 163
L+P + R ++ M +P G + I + HR P+Y+ P +F P+RF +K K
Sbjct: 346 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 405
Query: 164 --HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
PY Y PF +GPRNCIG + A+M+ K+ + ++L+ +
Sbjct: 406 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 443
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+T+A ++T+ L PEI ++ E + V + + L + YL + +KES+R
Sbjct: 255 GHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLR 314
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
LYPP R L + VP + + + R+ YF +PL FNPDRF
Sbjct: 315 LYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPK 374
Query: 165 P-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P + Y PFS G R+CIGQ+ A M K+++AK+L+R
Sbjct: 375 PRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQR 409
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 2/160 (1%)
Query: 47 DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLY 106
+TTA W LY L +P+ Q +++QE +SV + + L +M YL+ C+KESMRL
Sbjct: 297 ETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLT 356
Query: 107 PPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK--H 164
P VP R L P +P G + +N + F + +F P+R+L+K K +
Sbjct: 357 PSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKIN 416
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGST 204
P+A++PF G R CIG+++A + + + I+++Y + +T
Sbjct: 417 PFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVAT 456
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESV-GFYDGPVTIQTLASMDYLERCIKESM 103
G T++ ++W + L +Q+K E ++V G P+T L ++ L+RCIKE++
Sbjct: 264 GQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETL 323
Query: 104 RLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK-- 161
RL PP+ ++ R P +P G + ++ R+ + + L+FNPDR+L+
Sbjct: 324 RLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNP 383
Query: 162 -FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+AYVPF G CIG+ A + K + + +L+ Y
Sbjct: 384 ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLY 422
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+T S LG H +I+E++ QE + +T +TL M YL++ ++E +R
Sbjct: 255 GHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLR 313
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL----E 160
L PPV R+L + P G + + + H P+ +P+P +F+P+RF
Sbjct: 314 LIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA 373
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P+A+VPF G R C+G++ A + K+ ++++++
Sbjct: 374 THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF 412
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y+E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P+ +AR++ K + +P G ++ + R P +F NP +FNP FL
Sbjct: 340 FGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+FK A+VPFS G RNC G+ +A M + +++ + + S+ PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y+E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P+ +AR++ K + +P G ++ + R P +F NP +FNP FL
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+FK A+VPFS G RNC G+ +A M + +++ + + S+ PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y+E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P+ +AR++ K + +P G ++ + R P +F NP +FNP FL
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+FK A+VPFS G RNC G+ +A M + +++ + + S+ PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y+E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P+ +AR++ K + +P G ++ + R P +F NP +FNP FL
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+FK A+VPFS G RNC G+ +A M + +++ + + S+ PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y+E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P+ +AR++ K + +P G ++ + R P +F NP +FNP FL
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+FK A+VPFS G RNC G+ +A M + +++ + + S+ PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDG-PVTIQTLASMDYLERCIKES 102
GH T++G ASWTL L H + ++ E + + + DG V+ L + LE +KE+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL-YGDGRSVSFHALRQIPQLENVLKET 314
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF---- 158
+RL+PP+ ++ R + + G + + +RIPE FP+P +F P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
E + + ++PF G C+G A+M K + + +L+ Y P++ R
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYR 427
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDG-PVTIQTLASMDYLERCIKES 102
GH T++G ASWTL L H + ++ E + + + DG V+ L + LE +KE+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL-YGDGRSVSFHALRQIPQLENVLKET 314
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF---- 158
+RL+PP+ ++ R + + G + + +RIPE FP+P +F P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
E + + ++PF G C+G A+M K + + +L+ Y P++ R
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYR 427
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDG-PVTIQTLASMDYLERCIKES 102
GH T++G ASWTL L H + ++ E + + + DG V+ L + LE +KE+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL-YGDGRSVSFHALRQIPQLENVLKET 314
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF---- 158
+RL+PP+ ++ R + + G + + +RIPE FP+P +F P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
E + + ++PF G C+G A+M K + + +L+ Y P++ R
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYR 427
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDG-PVTIQTLASMDYLERCIKES 102
GH T++G ASWTL L H + ++ E + + + DG V+ L + LE +KE+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL-YGDGRSVSFHALRQIPQLENVLKET 314
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF---- 158
+RL+PP+ ++ R + + G + + +RIPE FP+P +F P R+
Sbjct: 315 LRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
E + + ++PF G C+G A+M K + + +L+ Y P++ R
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYR 427
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T A W L AL HPE ++I E E+V PV + + + + I E+MR
Sbjct: 275 GSETIASTIMWLLQALADHPEHADRIRDEVEAV-TGGRPVAFEDVRKLRHTGNVIVEAMR 333
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL-EKFK 163
L P V V+ R+ A + +PAG I + + R P+ + + LEF+PDR+L E+
Sbjct: 334 LRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA 393
Query: 164 H--PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY------------VVGSTVKPKN 209
+ YA PFS G R C +M ++ A + +Y VG T++P +
Sbjct: 394 NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPHD 453
Query: 210 L 210
L
Sbjct: 454 L 454
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +T + + L HPE++ K+ +E + V + + A M Y E I E R
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQR 339
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK-- 161
+P+ +A ++ K + +P G +F + R P +F NP +FNP FL+K
Sbjct: 340 FGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKG 399
Query: 162 -FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
FK A+VPFS G R C G+ +A M + I++ + S PK++ ++
Sbjct: 400 QFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVS 452
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Query: 47 DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLY 106
DT + + L+ + HP ++E I++E ++V + + I + + +E I ESMR
Sbjct: 309 DTMSVSLFFMLFLIAKHPNVEEAIIKEIQTV-IGERDIKIDDIQKLKVMENFIYESMRYQ 367
Query: 107 PPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPY 166
P V ++ R+ V G +I +N+ HR+ E+FP P EF + F + PY
Sbjct: 368 PVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV--PY 424
Query: 167 AYV-PFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGS 203
Y PF GPR C G+ +AM+ K ++ +L+R+ V +
Sbjct: 425 RYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKT 462
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAE-SVGFYDGPVTIQTLASMDYLERCIKE 101
G +TT V WTL L H+P++++K+ +E + +VGF P TI + LE I+E
Sbjct: 283 GAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTP-TISDRNRLLLLEATIRE 341
Query: 102 SMRLYPPVP-VIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL- 159
+RL P P +I + V G + IN++ H + + P +F P+RFL
Sbjct: 342 VLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLN 401
Query: 160 ----EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+ +Y+PF GPR+CIG+ +A +++A +L+R+
Sbjct: 402 PAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRF 445
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
G +TT+ + L L HPE+ K+ +E E V + +Q + M Y + + E
Sbjct: 277 GAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEV 336
Query: 103 MRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK 161
R +P + + +K N L+P G +I I++ + FPNP F+P FL++
Sbjct: 337 QRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE 396
Query: 162 ---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNL 210
FK ++PFS G R C+G+ +A M + + IL+ + + S V PKNL
Sbjct: 397 GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNL 448
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
G +TT+ + L L HPE+ K+ +E E V + +Q + M Y + + E
Sbjct: 279 GAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEV 338
Query: 103 MRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK 161
R +P + + +K N L+P G +I I++ + FPNP F+P FL++
Sbjct: 339 QRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE 398
Query: 162 ---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNL 210
FK ++PFS G R C+G+ +A M + + IL+ + + S V PKNL
Sbjct: 399 GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNL 450
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESV---GFYDGPVTIQTLASMDYLERCIKE 101
G +TTA SW + L HHPEIQ ++ +E + G VT + A + L I E
Sbjct: 291 GTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAE 350
Query: 102 SMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE 160
+RL P VP+ + + P +P G + N+ H + P EF PDRFLE
Sbjct: 351 VLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE 410
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVV 201
+P A + F G R C+G+ +A + +++A++L+ + +
Sbjct: 411 PGANPSA-LAFGCGARVCLGESLARLELFVVLARLLQAFTL 450
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 25 QSHPAEEQFSAIPVWSKD--ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDG 82
Q+ +E + + + D G +TT+ + L L HPE+ K+ +E E V +
Sbjct: 259 QNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNR 318
Query: 83 PVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQH 141
+Q M Y + + E R +P + + +K N L+P G +I ++
Sbjct: 319 SPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVL 378
Query: 142 RIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+ FPNP F+P FL++ FK ++PFS G R C+G+ +A M + + IL+
Sbjct: 379 HDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQN 438
Query: 199 YVVGSTVKPKNL 210
+ + S + PK+L
Sbjct: 439 FNLKSLIDPKDL 450
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 21/168 (12%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESM 103
GH+T A +W+ L H P+ Q+++ + E+ +E++
Sbjct: 221 AGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQEAL 262
Query: 104 RLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
RLYPP ++ R+L PL +P G ++ ++ + R+ +FP+ F P+RFLE+
Sbjct: 263 RLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERG 320
Query: 164 HPYA-YVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNL 210
P Y PF G R C+G+ A++ I++ +R+ + P+ L
Sbjct: 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVL 368
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESV-GFYDGPVTIQTLASMDYLERCIKE 101
G +TT+ ++L L HPE+ ++ +E E V G + P +Q + M Y + I E
Sbjct: 275 GAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPC-MQDRSRMPYTDAVIHE 333
Query: 102 SMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE 160
R +P + + ++ N +P G I ++ + FPNP F+P FL+
Sbjct: 334 IQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLD 393
Query: 161 K---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+ FK ++PFS G R C+G+ +A M + + IL+ + + S V+PK+L +
Sbjct: 394 ESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDIT 449
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESM 103
GH+T A +W+ L H P+ Q+++ + E+ +E++
Sbjct: 221 AGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQEAL 262
Query: 104 RLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
RLYPP ++ R+L PL +P G ++ ++ + R+ YFP F P+RFL +
Sbjct: 263 RLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERFLAERG 320
Query: 164 HPYA-YVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNL 210
P Y PF G R C+G+ A++ I++ +R+ + P+ L
Sbjct: 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVL 368
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 44 TGHDTTAGVASWTLYALGH----------HPEIQEKIVQEAESVGFYDGPVTIQTLASMD 93
G T+ SW++ L H H EI E Q YD + M
Sbjct: 268 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YD-----NVMDEMP 317
Query: 94 YLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEF 153
+ ERC++ES+R PP+ ++ R + A +K + +VP G I + H E FPNP +
Sbjct: 318 FAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLW 377
Query: 154 NPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+P+R K A++ F G CIGQK A++ K ++A + Y
Sbjct: 378 DPER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 44 TGHDTTAGVASWTLYALGH----------HPEIQEKIVQEAESVGFYDGPVTIQTLASMD 93
G T+ SW++ L H H EI E Q YD + M
Sbjct: 262 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YD-----NVMDEMP 311
Query: 94 YLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEF 153
+ ERC++ES+R PP+ ++ R + A +K + +VP G I + H E FPNP +
Sbjct: 312 FAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLW 371
Query: 154 NPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+P+R K A++ F G CIGQK A++ K ++A + Y
Sbjct: 372 DPER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 45 GHDTTAGVASWTLYALGH----------HPEIQEKIVQEAESVGFYDGPVTIQTLASMDY 94
G T+ SW++ L H H EI E Q YD + M +
Sbjct: 278 GQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN-----YD-----NVMDEMPF 327
Query: 95 LERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
ERC++ES+R PP+ ++ R + A +K + +VP G I + H E FPNP ++
Sbjct: 328 AERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWD 387
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P+R K A++ F G CIGQK A++ K ++A + Y
Sbjct: 388 PER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +TT V W + + +P IQ ++ +E + + +G + M Y E + E +R
Sbjct: 285 GTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLR 344
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK-- 161
VP+ I +P G ++ N++ H +Y+ +P F+P+RFL+
Sbjct: 345 FCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSG 404
Query: 162 -FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
F A VPFS G R+C+G+ +A M + +L+R+
Sbjct: 405 YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +TT V W + + +P IQ ++ +E + + +G + M Y E + E +R
Sbjct: 285 GTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLR 344
Query: 105 LYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK-- 161
VP+ I +P G ++ N++ H +Y+ +P F+P+RFL+
Sbjct: 345 FCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSG 404
Query: 162 -FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
F A VPFS G R+C+G+ +A M + +L+R+
Sbjct: 405 YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQT-LASMDYLERCIKES 102
G T+ +W+L L P + + + + + + + + M + E+C +ES
Sbjct: 263 AGQHTSTITTTWSLLHL-MDPRNKRHLAKLHQEIDEFPAQLNYDNVMEEMPFAEQCARES 321
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
+R PP+ ++ R++ P++ +VP G I + H+ E FPNP E+NP+R ++
Sbjct: 322 IRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLV 381
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
A+ F G CIG+K ++ K ++A +L+ Y
Sbjct: 382 DG--AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY 416
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 44 TGHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 263 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERC 317
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 318 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 376
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 377 --DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 44 TGHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERC 318
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 319 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 377
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 378 --DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 44 TGHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 265 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERC 319
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 320 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 378
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 379 --DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 45 GHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCI 99
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 278 GQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN-----VMDEMPFAERCA 332
Query: 100 KESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL 159
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 333 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 390
Query: 160 EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 391 -DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 44 TGHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERC 318
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 319 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 377
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 378 --DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 45 GHDTTAGVASWTLYALGH-----HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCI 99
G T++ +W++ L H H E K ++E + Y+ + M + ERC
Sbjct: 278 GQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERCA 332
Query: 100 KESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL 159
+ES+R PP+ ++ R++ A +K + +VP G I + H E FP P ++P+R
Sbjct: 333 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 390
Query: 160 EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
K A++ F G CIGQK ++ K ++A + Y
Sbjct: 391 -DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+TLY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 271 GHETTSGLLSFTLYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 329
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G I + + + HR + + + EF P+RF
Sbjct: 330 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFEN 387
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 388 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 427
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A G DTT+ W LY + + ++Q+ + E + L + L+ IKE+
Sbjct: 285 AGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKET 344
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
+RL+P + R L L + ++PA + + ++ R P +F +P F+P R+L K
Sbjct: 345 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 404
Query: 163 KHP--YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVV 201
K+ + + F G R C+G+++A + I + +L+ + V
Sbjct: 405 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A G DTT+ W LY + + ++Q+ + E + L + L+ IKE+
Sbjct: 282 AGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKET 341
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
+RL+P + R L L + ++PA + + ++ R P +F +P F+P R+L K
Sbjct: 342 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 401
Query: 163 KHP--YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVV 201
K+ + + F G R C+G+++A + I + +L+ + V
Sbjct: 402 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 442
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K+ +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKVAEEATRV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 268 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P VP + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 327 LWPTVPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A G +TT+ W LY + +QE + +E + + L + L+ IKE+
Sbjct: 286 AGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKET 345
Query: 103 MRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
+RL+P + R + L + L+PA + + ++ R P +F +P +F+P R+L K
Sbjct: 346 LRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKD 405
Query: 163 KH--PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVV 201
K + + F G R C+G+++A + + + IL+ + V
Sbjct: 406 KDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKV 446
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 7/196 (3%)
Query: 25 QSHPAEE---QFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYD 81
+S P+ E Q + V S A G +TT+ + + +P + E++ +E E V
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 82 GPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQ 140
P + A M Y + I E RL +P + + + ++P +F +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 141 HRIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
P YF P FNP FL+ K ++PFS G R C+G+ +A + IL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 198 RYVVGSTVKPKNLRLA 213
+ + S V P+++ L
Sbjct: 437 NFSIASPVPPEDIDLT 452
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 25 QSHPAEEQFS--AIPVWSKDA--TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFY 80
+ H AE ++ I V D G +TT+ + L L +PEI+EK+ +E + V
Sbjct: 255 EKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRV--- 311
Query: 81 DGPVTIQTLAS---MDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFIN 136
GP I + M Y++ + E R VP + + L+P G +
Sbjct: 312 IGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPT 371
Query: 137 VFEQHRIPEYFPNPLEFNPDRFLE---KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIA 193
+ + FP+P +F P+ FL KFK+ + PFSTG R C G+ +A M +L+
Sbjct: 372 LDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLC 431
Query: 194 KILKRYVVGSTVKPKNLRLA 213
IL+ + + V PK++ L+
Sbjct: 432 AILQHFNLKPLVDPKDIDLS 451
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESV-GFYDGPVTIQTLASMDYLERCIKESM 103
G +TT+ + L L HPE+ K+ +E + V G + P +Q + M Y + + E
Sbjct: 280 GTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPC-MQDRSHMPYTDAVVHEIQ 338
Query: 104 RLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK- 161
R VP + + K N L+P G +I + + FPNP F+P FL+K
Sbjct: 339 RYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKN 398
Query: 162 --FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNL 210
FK ++PFS G R C G+ +A M + + IL+ + + S KNL
Sbjct: 399 GNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNL 449
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +TT+ + + +P + E++ +E E V P + A M Y E I E R
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQR 339
Query: 105 LYPPVPVIARQLYAPLKT-PNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK-- 161
+P+ + + ++P +F+ + P YF P FNPD FL+
Sbjct: 340 FSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANG 399
Query: 162 -FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
K A++PFS G R C+G+ +A + IL+ + + S V P+++ L
Sbjct: 400 ALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLT 452
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 268 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 327 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 325 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 381 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 325 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ ++ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHETTSGLLTFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
++P P + LYA K ML + G + + + + HR + + + EF P+RF
Sbjct: 325 IWPTAPAFS--LYA--KEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF 380
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 381 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 268 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 327 LWPTSPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E+
Sbjct: 264 AAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEA 322
Query: 103 MRLYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPD 156
+RL+P P + LYA K +L + G + + + + HR + + + EF P+
Sbjct: 323 LRLWPTGPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 157 RFLEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
RF P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E+
Sbjct: 263 AAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEA 321
Query: 103 MRLYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
+RL+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 322 LRLWPTGPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 325 LWPTAPPFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ P+ G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH++T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHESTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH++T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHESTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH++T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHESTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 325 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 380
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 381 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIG++ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHF 421
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 7/196 (3%)
Query: 25 QSHPAEE---QFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYD 81
+S P+ E Q + V S G +TT+ + + +P + E++ +E E V
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 82 GPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQ 140
P + A M Y + I E RL +P + + + ++P +F +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 141 HRIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
P YF P FNP FL+ K ++PFS G R C+G+ +A + IL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 198 RYVVGSTVKPKNLRLA 213
+ + S V P+++ L
Sbjct: 437 NFSIASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 7/196 (3%)
Query: 25 QSHPAEE---QFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYD 81
+S P+ E Q + V S G +TT+ + + +P + E++ +E E V
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 82 GPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQ 140
P + A M Y + I E RL +P + + + ++P +F +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 141 HRIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
P YF P FNP FL+ K ++PFS G R C+G+ +A + IL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 198 RYVVGSTVKPKNLRLA 213
+ + S V P+++ L
Sbjct: 437 NFSIASPVPPEDIDLT 452
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHENTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRF 158
L+P P + LYA K +L + G + + + + HR + + +E F P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ P+ G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 7/196 (3%)
Query: 25 QSHPAEE---QFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYD 81
+S P+ E Q + V S G +TT+ + + +P + E++ +E E V
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 82 GPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQ 140
P + A M Y + I E RL +P + + + ++P +F +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 141 HRIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
P YF P FNP FL+ K ++PFS G R C+G+ +A + IL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 198 RYVVGSTVKPKNLRLA 213
+ + S V P+++ L
Sbjct: 437 NFSIASPVPPEDIDLT 452
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHEATSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRF 158
L+P P + LYA K +L + G + + + + HR + + +E F P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHEATSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRFLE 160
L+P P + LYA T + G + + + + HR + + +E F P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+ T+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHEATSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRF 158
L+P P + LYA K +L + G + + + + HR + + +E F P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 29 AEEQFSAIPVWSKDATGH--DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTI 86
AE AI S + T DTTA TL+ L +P++Q+ + QE+ +
Sbjct: 271 AELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQ 330
Query: 87 QTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEY 146
+ + L +KE++RLYP + R + + L N +PAG + + ++ R
Sbjct: 331 KATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAAL 390
Query: 147 FPNPLEFNPDRFLE--KFKHPYAYVPFSTGPRNCIGQK 182
FP P +NP R+L+ + +VPF G R C+G++
Sbjct: 391 FPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLGRR 428
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A GH+ T+G+ S+ LY L +P +K +EA V D + + + + Y+ + E+
Sbjct: 263 AAGHEATSGLLSFALYFLVKNPHELQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEA 321
Query: 103 MRLYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRF 158
+RL+P P + LYA T + G + + + + HR + + +E F P+RF
Sbjct: 322 LRLWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R C GQ+ A+ +++ +LK +
Sbjct: 382 PSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHF 421
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
G DT SW+L L PEIQ KI +E ++V + + + YLE I E+
Sbjct: 292 GAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILET 351
Query: 103 MRLYPPVPVIARQLYAPLKTPN-MLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL-- 159
R +P T N +P C +F+N ++ + PE + +P EF P+RFL
Sbjct: 352 FRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTA 411
Query: 160 --EKFKHPYA--YVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P + + F G R CIG+ +A + +A +L++
Sbjct: 412 DGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQ 454
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ P G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 7/196 (3%)
Query: 25 QSHPAEE---QFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYD 81
+S P+ E Q + V S G +TT+ + + +P + E++ +E E V
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 82 GPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQ 140
P + A M Y + I E RL +P + + + ++P +F +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 141 HRIPEYFPNPLEFNPDRFLEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
P YF P FNP FL+ K ++PFS G R C G+ +A + IL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQ 436
Query: 198 RYVVGSTVKPKNLRLA 213
+ + S V P+++ L
Sbjct: 437 NFSIASPVPPEDIDLT 452
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A GH+ T+G+ S+ LY L +P +K +EA V D + + + + Y+ + E+
Sbjct: 264 AAGHEATSGLLSFALYFLVKNPHELQKAAEEAARV-LVDPVPSHKQVKQLKYVGMVLNEA 322
Query: 103 MRLYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPLE-FNPDRF 158
+RL+P P + LYA T + G + + + + HR + + +E F P+RF
Sbjct: 323 LRLWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF 380
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R CIGQ+ A+ +++ +LK +
Sbjct: 381 ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 105 LYPPVPVIARQLYAPLKT---PNMLVPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRFLE 160
L+P P + LYA T + G + + + + HR + + + EF P+RF
Sbjct: 325 LWPTAPAFS--LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 161 KFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ PF G R C GQ+ A+ +++ +LK +
Sbjct: 383 PSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHF 422
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++R
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 105 LYPPVPVIARQLYAPLKTPNML-----VPAGCSIFINVFEQHRIPEYFPNPL-EFNPDRF 158
L+P P + LYA K +L + G + + + + HR + + + EF P+RF
Sbjct: 324 LWPTAPAFS--LYA--KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 159 LEKFKHP-YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
P +A+ P G R CIGQ+ A+ +++ +LK +
Sbjct: 380 ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
+ G TT+ +W L + HP++Q ++ QE + V + A M Y I E
Sbjct: 282 SAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEV 341
Query: 103 MRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE- 160
R VP+ + ++ +P G ++ N+ + + P F+P+ FL+
Sbjct: 342 QRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDA 401
Query: 161 --KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
F P A++PFS G R C+G+ +A M + +L+ +
Sbjct: 402 QGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
+ G TT+ +W L + HP++Q ++ QE + V + A M Y I E
Sbjct: 282 SAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEV 341
Query: 103 MRLYPPVPVIARQLYA-PLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE- 160
R VP+ + + ++ +P G ++ N+ + + P F+P+ FL+
Sbjct: 342 QRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDA 401
Query: 161 --KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
F P A++PFS G R C+G+ +A M + +L+ +
Sbjct: 402 QGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
G DT SW+L L +P +Q KI +E ++V + + + Y+E I E+
Sbjct: 289 GAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILET 348
Query: 103 MRLYPPVP-VIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL-- 159
R VP I +P G +F+N ++ + + + NP EF P+RFL
Sbjct: 349 FRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTP 408
Query: 160 ----EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+K + F G R CIG+ +A + +A +L+R
Sbjct: 409 DGAIDKVLSEKVII-FGMGKRKCIGETIARWEVFLFLAILLQR 450
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 36 IPVWSKDATG--HDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMD 93
+P D G DT + W L +P++Q ++ E + V D + ++
Sbjct: 280 VPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLP 339
Query: 94 YLERCIKESMRLYPPVPV-IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
Y+ + E+MR VPV I A +P +F+N + + P +PNP
Sbjct: 340 YVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPEN 399
Query: 153 FNPDRFLEK----FKHPYAYVP-FSTGPRNCIGQKVAMMSQKILIAKILK---------- 197
F+P RFL+K K + V FS G R CIG++++ M Q L IL
Sbjct: 400 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKM-QLFLFISILAHQCDFRANPN 458
Query: 198 -----RYVVGSTVKPKNLRL 212
+ G T+KPK+ ++
Sbjct: 459 EPAKMNFSYGLTIKPKSFKV 478
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + +YAL HP+ + A M L+ ++E +R
Sbjct: 264 GHETTVNLIANGMYALLSHPDQLAAL------------------RADMTLLDGAVEEMLR 305
Query: 105 LYPPVPVIARQL-YAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
PV + P+ ++PAG ++ + + + HR PE FP+P F+ R
Sbjct: 306 YEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------ 359
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
++ F G CIG +A + +I + +L+R
Sbjct: 360 DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + +YAL HP+ + A M L+ ++E +R
Sbjct: 264 GHETTVNLIANGMYALLSHPDQLAAL------------------RADMTLLDGAVEEMLR 305
Query: 105 LYPPVPVIARQL-YAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
PV + P+ ++PAG ++ + + + HR PE FP+P F+ R
Sbjct: 306 YEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------ 359
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
++ F G CIG +A + +I + +L+R
Sbjct: 360 DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + +YAL HP+ + A M L+ ++E +R
Sbjct: 264 GHETTVNLIANGMYALLSHPDQLAAL------------------RADMTLLDGAVEEMLR 305
Query: 105 LYPPVPVIARQL-YAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
PV + P+ ++PAG ++ + + + HR PE FP+P F+ R
Sbjct: 306 YEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------ 359
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
++ F G CIG +A + +I + +L+R
Sbjct: 360 DTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 87 QTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEY 146
LA + R I E++R PPV +I RQL M + +F + +R PE
Sbjct: 294 DVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEA 353
Query: 147 FPNPLEFNPDR----FLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVG 202
F P FN R F ++ F +G NC+G A +I+ +L
Sbjct: 354 FEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLD----- 408
Query: 203 STVKPKNLRLAQN 215
K +N+RL ++
Sbjct: 409 ---KMRNIRLEED 418
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 63 HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVP----VIARQLYA 118
H ++ E+I +S G DG VT++ + M + + ES+R+ PPVP
Sbjct: 300 HTQLAEEIRGAIKSYG--DGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTI 357
Query: 119 PLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGP--- 175
V G +F + P+ F P E+ PDRF+ + YV +S GP
Sbjct: 358 ESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETE 417
Query: 176 ------RNCIGQKVAMMSQKILIAKILKRY 199
+ C G+ ++ ++ + ++ +RY
Sbjct: 418 SPTVENKQCAGKDFVVLITRLFVIELFRRY 447
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 24/152 (15%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GHDTT+ + + L +PE Q + + ++ + R + E++R
Sbjct: 268 GHDTTSSSSGGAIIGLSRNPE-QLALAKSDPAL-----------------IPRLVDEAVR 309
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
PV R A + + G I ++ +R E F NP EF+ RF
Sbjct: 310 WTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF------ 363
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKIL 196
P ++ F G C+GQ +A + KI ++L
Sbjct: 364 PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELL 395
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
I+E+MR PPV +++R L VP G ++ + + HR P P F+PDR
Sbjct: 293 IEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR- 351
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+ +H + F G C+G +A + + + + R+
Sbjct: 352 -AQIRH----LGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 89 LASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE-YF 147
+A +D L I+E +R PV + R L A + AG I + +FE E F
Sbjct: 260 VADVDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIML-MFESANFDESVF 318
Query: 148 PNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKP 207
+P F DR +P ++V F G C+G ++A + +++ ++L+R
Sbjct: 319 GDPDNFRIDR------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRL-------- 364
Query: 208 KNLRLAQN 215
+LRLA +
Sbjct: 365 PDLRLADD 372
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 24/154 (15%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + S ++ L HPE K+ + + +G ++E +R
Sbjct: 235 GHETTVNLISNSVLCLLQHPEQLLKLRENPDLIG------------------TAVEECLR 276
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
P + AR + + + G +++ + +R P F NP F+ R
Sbjct: 277 YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR------S 330
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P ++ F G C+G +A + +I I +L+R
Sbjct: 331 PNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G++TT + +Y HP+ KI + E + ++E +R
Sbjct: 254 GYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQAVEEVLR 295
Query: 105 LYPPVPVIARQLYA-PLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
P +PV A ++ A + + +P G +F+ HR P F + DRF K
Sbjct: 296 WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADA-----DRFDITVK 350
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+ F GP C+G +A + +A + R
Sbjct: 351 REAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G++TT + +Y HP+ KI + E + ++E +R
Sbjct: 244 GYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQAVEEVLR 285
Query: 105 LYPPVPVIARQLYA-PLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
P +PV A ++ A + + +P G +F+ HR P F + DRF K
Sbjct: 286 WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADA-----DRFDITVK 340
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+ F GP C+G +A + +A + R
Sbjct: 341 REAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 97 RCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPD 156
+ I+E++R PPV R+ +K + + G + + + +R E F + +F PD
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPD 301
Query: 157 RFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
R +P ++ F +G C+G +A + +I I + KR+
Sbjct: 302 R------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 97 RCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPD 156
+ I+E++R PPV R+ +K + + G + + + +R E F + +F PD
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPD 301
Query: 157 RFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
R +P ++ F +G C+G +A + +I I + KR+
Sbjct: 302 R------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 324 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 365
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 324 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 365
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 324 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 365
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 332 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 373
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 332 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 373
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 24/153 (15%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + L H ++ +++ ES P ++ L MR
Sbjct: 255 GHETTTNFLAKAVLTLRAHRDVLDELRTTPEST-----PAAVEEL-------------MR 296
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
PPV + R Y ++ + +P G + + +R P FP+P + R E+
Sbjct: 297 YDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAAER--- 353
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILK 197
V F G C+G +A +I + +L
Sbjct: 354 ---QVGFGLGIHYCLGATLARAEAEIGLRALLD 383
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP---- 331
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
DR ++ + P +V F GP C G +A + ++L+ +L R
Sbjct: 332 -DR-IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP---- 331
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
DR ++ + P +V F GP C G +A + ++L+ +L R
Sbjct: 332 -DR-IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+R P +V F GP C G +A + ++L+ +L R
Sbjct: 336 FER------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP---- 331
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
DR ++ + P +V F GP C G +A + ++L+ +L R
Sbjct: 332 -DR-IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+R P +V F GP C G +A + ++L+ +L R
Sbjct: 336 FER------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP---- 331
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
DR ++ + P +V F GP C G +A + ++L+ +L R
Sbjct: 332 -DR-IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 97 RCIKESMRLYPPVPVI--ARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFN 154
R I E +R P + +R ++ + + AG +++++ +R PE FP+P +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 155 PDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+R P +V F GP C G +A + ++L+ +L R
Sbjct: 336 FER------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 93 DYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLE 152
DY E ++E R YP P + + + M P G + ++++ + + +P E
Sbjct: 272 DYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 153 FNPDRFLEKFKHPYAYVPFSTGP----RNCIGQKVAMMSQKI 190
F P+RF + + ++P G C G+ + + K+
Sbjct: 332 FRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 373
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 90 ASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPN 149
A + L ++E++R PV R + + AG + +N + P FP
Sbjct: 317 ADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPE 376
Query: 150 PLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P +F+P R + ++ F G C+G +A + ++L+ +L R
Sbjct: 377 PRKFDPTRPANR------HLAFGAGSHQCLGLHLARLEMRVLLDVLLDR 419
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G+DT G+ ++ L P+ + ++ + E + ++E +R
Sbjct: 250 GNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGI------------------PDAVEELLR 291
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIP-EYFPNPLEFNPDRFLEKFK 163
L PV +AR + + +PAG + + +R +Y P+ E + R
Sbjct: 292 LTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRC----- 346
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P + FS G +C+G A M ++ + ++L R
Sbjct: 347 -PRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G+DT G+ ++ L P+ + ++ + E + ++E +R
Sbjct: 250 GNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGI------------------PDAVEELLR 291
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIP-EYFPNPLEFNPDRFLEKFK 163
L PV +AR + + +PAG + + +R +Y P+ E + R
Sbjct: 292 LTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRC----- 346
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P + FS G +C+G A M ++ + ++L R
Sbjct: 347 -PRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G+DT G+ ++ L P+ + ++ + E + ++E +R
Sbjct: 251 GNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGI------------------PDAVEELLR 292
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIP-EYFPNPLEFNPDRFLEKFK 163
L PV +AR + + +PAG + + +R +Y P+ E + R
Sbjct: 293 LTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRC----- 347
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P + FS G +C+G A M ++ + ++L R
Sbjct: 348 -PRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 381
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 61 GH--HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPV----IAR 114
GH H + E+I +S G G +T+ + M+ + + E +R PPV +
Sbjct: 314 GHQVHNRLAEEIRSVIKSNG---GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKK 370
Query: 115 QLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL-EKFKHPYAYVPFST 173
L V AG ++ R P+ F EF P+RF+ E+ + +V +S
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 174 GP---------RNCIGQKVAMMSQKILIAKILKRYV----------VGSTVKPKNLRLA 213
GP + C G+ ++ ++ + +I +RY +GS+V +LR A
Sbjct: 431 GPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA 489
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 61 GH--HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPV----IAR 114
GH H + E+I +S G G +T+ + M+ + + E +R PPV +
Sbjct: 314 GHQVHNRLAEEIRSVIKSNG---GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKK 370
Query: 115 QLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFL-EKFKHPYAYVPFST 173
L V AG ++ R P+ F EF P+RF+ E+ + +V +S
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 174 GP---------RNCIGQKVAMMSQKILIAKILKRYV----------VGSTVKPKNLRLA 213
GP + C G+ ++ ++ + +I +RY +GS+V +LR A
Sbjct: 431 GPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA 489
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 29/189 (15%)
Query: 36 IPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQE--------AESVGFYDGPVTIQ 87
+ +W+ A T W+L+ + +PE + +E + V P+ +
Sbjct: 264 VVLWASQAN----TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLS 319
Query: 88 T--LASMDYLERCIKESMRLYPP---VPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHR 142
L + L+ IKES+RL + L+ + + I + H
Sbjct: 320 QAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHL 379
Query: 143 IPEYFPNPLEFNPDRFLEK------------FKHPYAYVPFSTGPRNCIGQKVAMMSQKI 190
PE +P+PL F DR+L++ K Y Y+PF +G C G+ A+ K
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 191 LIAKILKRY 199
+ +L +
Sbjct: 440 FLILMLSYF 448
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 29/189 (15%)
Query: 36 IPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQE--------AESVGFYDGPVTIQ 87
+ +W+ A T W+L+ + +PE + +E + V P+ +
Sbjct: 264 VVLWASQAN----TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLS 319
Query: 88 T--LASMDYLERCIKESMRLYPP---VPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHR 142
L + L+ IKES+RL + L+ + + I + H
Sbjct: 320 QAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHL 379
Query: 143 IPEYFPNPLEFNPDRFLEK------------FKHPYAYVPFSTGPRNCIGQKVAMMSQKI 190
PE +P+PL F DR+L++ K Y Y+PF +G C G+ A+ K
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 191 LIAKILKRY 199
+ +L +
Sbjct: 440 FLILMLSYF 448
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
++E +R PP P + R + + +PA + V +R + +P F+P R
Sbjct: 298 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 356
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
A + F G C+G +A + ++ + +I+ R+
Sbjct: 357 ---KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
++E +R PP P + R + + +PA + V +R + +P F+P R
Sbjct: 278 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 336
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
A + F G C+G +A + ++ + +I+ R+
Sbjct: 337 ---KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TTA + S + L HPE Q +V+ A+ ++E +R
Sbjct: 246 GHETTANMISLGVVGLLSHPE-QLTVVK-----------------ANPGRTPMAVEELLR 287
Query: 105 LYPPVP-VIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
+ V +R ++ + + AG + +++ + P F +P + +R +
Sbjct: 288 YFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER---GAR 344
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
H ++ F GP C+GQ +A M +I+ + +R
Sbjct: 345 H---HLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 112 IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPF 171
+AR ++ + AG ++++ +R P+ FP+P + DR P ++ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR------DPNPHLAY 349
Query: 172 STGPRNCIGQKVAMMSQKILIAKILKR 198
G C G +A M ++L+ +L+R
Sbjct: 350 GNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 112 IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPF 171
+AR ++ + AG ++++ +R P+ FP+P + DR P ++ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR------DPNPHLAY 349
Query: 172 STGPRNCIGQKVAMMSQKILIAKILKR 198
G C G +A M ++L+ +L+R
Sbjct: 350 GNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 76 SVGFYDGPVTIQTLASMDYLER--CIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSI 133
++ ++ P + L S + ER ++E R YP P + + N G S+
Sbjct: 255 ALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSV 314
Query: 134 FINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTG 174
++++ + P + +P EF P+RF E+ ++ + +P G
Sbjct: 315 LLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGG 355
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 98 CIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDR 157
I E +R+ PP R ++ +L+ AG I + +R PE F +P F+ R
Sbjct: 267 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 326
Query: 158 FLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
++ + F GP +C GQ ++ + A + +RY
Sbjct: 327 PPAASRN----LSFGLGPHSCAGQIISRAEATTVFAVLAERY 364
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 98 CIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDR 157
I E +R+ PP R ++ +L+ AG I + +R PE F +P F+ R
Sbjct: 269 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 328
Query: 158 FLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
++ + F GP +C GQ ++ + A + +RY
Sbjct: 329 PPAASRN----LSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C+G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLKK 365
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + AL HP+ Q K++ E S+ + ++E +R
Sbjct: 237 GHETTVNLIGNGVLALLTHPD-QRKLLAEDPSL-----------------ISSAVEEFLR 278
Query: 105 LYPPVPVIARQLYAPLKT-PNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
PV + A T + +PAG + + + +R ++ P PDR L+ +
Sbjct: 279 FDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMP-----EPDR-LDITR 332
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKI 195
V F G C+G ++A + ++ I ++
Sbjct: 333 DASGGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE-YFPNPLEFNPDR 157
I+E +R PV + R L A + + AG + + +FE E F P +F+ R
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMML-LFESANFDEAVFCEPEKFDVQR 325
Query: 158 FLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+P +++ F G C+G ++A + ++ ++L+R
Sbjct: 326 ------NPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRR 360
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TT + + AL HP+ Q K++ E S+ + ++E +R
Sbjct: 237 GHETTVNLIGNGVLALLTHPD-QRKLLAEDPSL-----------------ISSAVEEFLR 278
Query: 105 LYPPVPVIARQLYAPLKT-PNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
PV + A T + +PAG + + + +R ++ P PDR L+ +
Sbjct: 279 FDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMP-----EPDR-LDITR 332
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKI 195
V F G C+G ++A + ++ I ++
Sbjct: 333 DASGGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 44 TGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESM 103
GH+TT + L HPE + ++++ +V ++E +
Sbjct: 243 AGHETTVNAIALGALTLIQHPEQIDVLLRDPGAV------------------SGVVEELL 284
Query: 104 RLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFK 163
R I R ++ + AG ++ +++ +R + + NP F+ R +
Sbjct: 285 RFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR---NAR 341
Query: 164 HPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
H +V F G C+GQ +A +I + + R
Sbjct: 342 H---HVGFGHGIHQCLGQNLARAELEIALGGLFAR 373
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Query: 60 LGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPVIARQLYAP 119
+G + + I ++ G +T S D ++ ++E +R P + R A
Sbjct: 253 IGGNETTRHAITGAVHALATVPGLLTALRDGSAD-VDTVVEEVLRWTSPAMHVLRVTTAD 311
Query: 120 LKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCI 179
+ +P+G + + +R P F +P F P R P ++ F G +C+
Sbjct: 312 VTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR------KPNRHITFGHGMHHCL 365
Query: 180 GQKVAMMSQKILIAKILKR 198
G +A + +++ + +R
Sbjct: 366 GSALARIELSVVLRVLAER 384
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 215 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 268
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 269 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 316
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 317 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 364
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLAFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V + G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGV-TFFGGGVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVIATGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ F G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TTA + S ++ L HPE + A + ++E +R
Sbjct: 245 GHETTASMTSLSVITLLDHPEQYAAL------------------RADRSLVPGAVEELLR 286
Query: 105 LYPPVPVIA--RQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
Y + IA R A ++ L+ AG + + +R + +P + R
Sbjct: 287 -YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---SA 342
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+H ++ F G C+GQ +A + ++++ ++ R
Sbjct: 343 RH---HLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 26 SHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVT 85
SH ++E F+ I V A G +T + L +L P+++ + ++ E + P
Sbjct: 216 SHVSDELFATIGVTFFGA-GVISTGSFLTTALISLIQRPQLRNLLHEKPELI-----PAG 269
Query: 86 IQTLASMDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE 145
++ L ++ ++ +P +A A ++ ++LV G + + + + PE
Sbjct: 270 VEEL---------LRINLSFADGLPRLA---TADIQVGDVLVRKGELVLVLLEGANFDPE 317
Query: 146 YFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FPNP DR +P +++ G C G + +I I +LK+
Sbjct: 318 HFPNPGSIELDR-----PNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TTA + S ++ L HPE + A + ++E +R
Sbjct: 245 GHETTASMTSLSVITLLDHPEQYAAL------------------RADRSLVPGAVEELLR 286
Query: 105 LYPPVPVIA--RQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
Y + IA R A ++ L+ AG + + +R + +P + R
Sbjct: 287 -YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---SA 342
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+H ++ F G C+GQ +A + ++++ ++ R
Sbjct: 343 RH---HLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TTA + S ++ L HPE + A + ++E +R
Sbjct: 245 GHETTASMTSLSVITLLDHPEQYAAL------------------RADRSLVPGAVEELLR 286
Query: 105 LYPPVPVIA--RQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
Y + IA R A ++ L+ AG + + +R + +P + R
Sbjct: 287 -YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---SA 342
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+H ++ F G C+GQ +A + ++++ ++ R
Sbjct: 343 RH---HLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
GH+TTA + S ++ L HPE + A + ++E +R
Sbjct: 245 GHETTASMTSLSVITLLDHPEQYAAL------------------RADRSLVPGAVEELLR 286
Query: 105 LYPPVPVIA--RQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKF 162
Y + IA R A ++ L+ AG + + +R + +P + R
Sbjct: 287 -YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---SA 342
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+H ++ F G C+GQ +A + ++++ ++ R
Sbjct: 343 RH---HLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 154 NPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P+RF + + P ++ F G CIGQ++A + +I+ + +R
Sbjct: 325 EPERF-DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 154 NPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P+RF + + P ++ F G CIGQ++A + +I+ + +R
Sbjct: 325 EPERF-DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 154 NPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
P+RF + + P ++ F G CIGQ++A + +I+ + +R
Sbjct: 325 EPERF-DITRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 47 DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLAS 91
D TA + Y + +P + KI ++ E G YDGP T + S
Sbjct: 60 DCTANTNTCNKYGVSGYPTL--KIFRDGEEAGAYDGPRTADGIVS 102
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 23/154 (14%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +TT + + + L PE+ ++ ++ + + A++D L R + +
Sbjct: 250 GRETTTSMIALSTLLLLDRPELPAELRKDPDLMP-----------AAVDELLRVLSVADS 298
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
+ P+ V A + +T VPA + + + PE F +P + F H
Sbjct: 299 I--PLRVAAEDIELSGRT----VPADDGVIALLAGANHDPEQFDDPERVD---FHRTDNH 349
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+V F G C+GQ +A + ++ + +L+R
Sbjct: 350 ---HVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 23/158 (14%)
Query: 43 ATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
A GH+TT + + L HPE Q +V E+ ++E+
Sbjct: 241 AAGHETTISLIVNAVVNLSTHPE-QRALVLSGEA-----------------EWSAVVEET 282
Query: 103 MRLYPPVP-VIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEK 161
+R P V+ R + + ++PAG ++ ++ R E P DRF
Sbjct: 283 LRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGR-DERAHGP---TADRFDLT 338
Query: 162 FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
++ F GP C G ++ M + + + R+
Sbjct: 339 RTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 47 DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLAS 91
D TA + Y + +P + KI ++ E G YDGP T + S
Sbjct: 60 DCTANTNTCNKYGVSGYPTL--KIFRDGEEAGAYDGPRTADGIVS 102
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 141 HRIPEYFPNPLEFNPDRFLEK--FKH----PYAYVPFSTGPRNCIGQKVAMMSQKILIAK 194
H+ PE F N DR +K FK+ Y VP+ T C G+ A+ + K L+
Sbjct: 369 HQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFT 428
Query: 195 ILKRYVV 201
IL R+ V
Sbjct: 429 ILTRFDV 435
>pdb|3K6J|A Chain A, Crystal Structure Of The Dehydrogenase Part Of
Multifuctional Enzyme 1 From C.Elegans
Length = 460
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 57 LYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKES 102
+Y G+ P +KI+ + GF GP+T+ + D +E+ KE+
Sbjct: 252 MYEYGYLPHQIDKIIT---NFGFLMGPMTVADMNGFDVMEKLKKEN 294
>pdb|2VJN|A Chain A, Formyl-coa Transferase Mutant Variant G260a
pdb|2VJN|B Chain B, Formyl-coa Transferase Mutant Variant G260a
Length = 428
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|1P5H|A Chain A, Crystal Structure Of Formyl-Coa Transferase (Apoenzyme)
From Oxalobacter Formigenes
pdb|1P5H|B Chain B, Crystal Structure Of Formyl-Coa Transferase (Apoenzyme)
From Oxalobacter Formigenes
pdb|1P5R|A Chain A, Formyl-Coa Transferase In Complex With Coenzyme A
pdb|1P5R|B Chain B, Formyl-Coa Transferase In Complex With Coenzyme A
Length = 428
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|2VJQ|A Chain A, Formyl-Coa Transferase Mutant Variant W48q
pdb|2VJQ|B Chain B, Formyl-Coa Transferase Mutant Variant W48q
pdb|2VJQ|C Chain C, Formyl-Coa Transferase Mutant Variant W48q
pdb|2VJQ|D Chain D, Formyl-Coa Transferase Mutant Variant W48q
Length = 428
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|2VJP|A Chain A, Formyl-Coa Transferase Mutant Variant W48f
pdb|2VJP|B Chain B, Formyl-Coa Transferase Mutant Variant W48f
Length = 428
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|1T4C|A Chain A, Formyl-Coa Transferase In Complex With Oxalyl-Coa
Length = 427
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 120 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 168
>pdb|2VJK|A Chain A, Formyl-Coa Transferase With Aspartyl-Coa Thioester
Intermediate Derived From Oxalyl-Coa
pdb|2VJK|B Chain B, Formyl-Coa Transferase With Aspartyl-Coa Thioester
Intermediate Derived From Oxalyl-Coa
pdb|2VJL|A Chain A, Formyl-Coa Transferase With Aspartyl-Coa Thioester
Intermediate Derived From Formyl-Coa
pdb|2VJL|B Chain B, Formyl-Coa Transferase With Aspartyl-Coa Thioester
Intermediate Derived From Formyl-Coa
pdb|2VJM|A Chain A, Formyl-Coa Transferase With Aspartyl-Formyl Anhydide
Intermediate
Length = 428
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|2VJO|A Chain A, Formyl-Coa Transferase Mutant Variant Q17a With Aspartyl-
Coa Thioester Intermediates And Oxalate
pdb|2VJO|B Chain B, Formyl-Coa Transferase Mutant Variant Q17a With Aspartyl-
Coa Thioester Intermediates And Oxalate
Length = 428
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLASMD 93
+AS YA GH H ++ E + Q A + GF+DGP T+ A D
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAALGD 169
>pdb|4HUJ|A Chain A, Crystal Structure Of A Hypothetical Protein Sma0349 From
Sinorhizobium Meliloti
pdb|4HUJ|B Chain B, Crystal Structure Of A Hypothetical Protein Sma0349 From
Sinorhizobium Meliloti
Length = 220
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 47 DTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLAS 91
D G S L+ G+H + ++ + S+GF PV + TLA+
Sbjct: 159 DPDKGTGSRVLFLSGNHSDANRQVAELISSLGF--APVDLGTLAA 201
>pdb|1T4C|B Chain B, Formyl-Coa Transferase In Complex With Oxalyl-Coa
Length = 427
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLA 90
+AS YA GH H ++ E + Q A + GF+DGP T+ A
Sbjct: 120 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAA 165
>pdb|2VJM|B Chain B, Formyl-Coa Transferase With Aspartyl-Formyl Anhydide
Intermediate
Length = 428
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLA 90
+AS YA GH H ++ E + Q A + GF+DGP T+ A
Sbjct: 121 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAA 166
>pdb|1T3Z|A Chain A, Formyl-Coa Tranferase Mutant Asp169 To Ser
pdb|1T3Z|B Chain B, Formyl-Coa Tranferase Mutant Asp169 To Ser
Length = 427
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLA 90
+AS YA GH H ++ E + Q A + GF+DGP T+ A
Sbjct: 120 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAA 165
>pdb|1VGR|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Glu
pdb|1VGR|B Chain B, Formyl-Coa Transferase Mutant Asp169 To Glu
Length = 427
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLA 90
+AS YA GH H ++ E + Q A + GF+DGP T+ A
Sbjct: 120 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAA 165
>pdb|1VGQ|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Ala
pdb|1VGQ|B Chain B, Formyl-Coa Transferase Mutant Asp169 To Ala
Length = 427
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 52 VASWTLYALGH---HPEIQEKIVQ----EAESVGFYDGPVTIQTLA 90
+AS YA GH H ++ E + Q A + GF+DGP T+ A
Sbjct: 120 LASVKGYAEGHANEHLKVYENVAQCSGGAAATTGFWDGPPTVSGAA 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,294,301
Number of Sequences: 62578
Number of extensions: 253798
Number of successful extensions: 994
Number of sequences better than 100.0: 179
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 180
length of query: 215
length of database: 14,973,337
effective HSP length: 95
effective length of query: 120
effective length of database: 9,028,427
effective search space: 1083411240
effective search space used: 1083411240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)