RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2560
(215 letters)
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 132 bits (331), Expect = 5e-37
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 5/203 (2%)
Query: 14 CDRRCKSKAGLQSHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQE 73
R K K+ S + V S G +TT+ + + +P + E++ +E
Sbjct: 242 LLRMEKDKSDPSSEFHHQNLILT-VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE 300
Query: 74 AESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPVIARQ-LYAPLKTPNMLVPAGCS 132
E V P + A M Y + I E RL +P + + ++P
Sbjct: 301 IEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTE 360
Query: 133 IFINVFEQHRIPEYFPNPLEFNPDRFLE---KFKHPYAYVPFSTGPRNCIGQKVAMMSQK 189
+F + P YF P FNP FL+ K ++PFS G R C+G+ +A
Sbjct: 361 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELF 420
Query: 190 ILIAKILKRYVVGSTVKPKNLRL 212
+ IL+ + + S V P+++ L
Sbjct: 421 LFFTTILQNFSIASPVPPEDIDL 443
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 131 bits (329), Expect = 1e-36
Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 39 WSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
G++TT+ V S+ +Y L HP++Q+K+ +E ++V P T T+ M+YL+
Sbjct: 273 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMV 332
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ E++RL+P + R ++ M +P G + I + HR P+Y+ P +F P+RF
Sbjct: 333 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 392
Query: 159 LEK---FKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+K PY Y PF +GPRNCIG + A+M+ K+ + ++L+ +
Sbjct: 393 SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 436
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 122 bits (307), Expect = 1e-33
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 7 DQLSRSSCDRRCKSKAGLQSHPAEEQFSAIPVWSKDATGHDTTAGVASWTLYALGHHPEI 66
+ D + K S ++E A +TT V W + + +P I
Sbjct: 235 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG-TETTTNVLRWAILFMALYPNI 293
Query: 67 QEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPV-IARQLYAPLKTPNM 125
Q ++ +E + + +G + M Y E + E +R VP+ I
Sbjct: 294 QGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 353
Query: 126 LVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE---KFKHPYAYVPFSTGPRNCIGQK 182
+P G ++ N++ H +Y+ +P F+P+RFL+ F A VPFS G R+C+G+
Sbjct: 354 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 413
Query: 183 VAMMSQKILIAKILKRY--------------VVGSTVKPKNLRL 212
+A M + +L+R+ +G T++P+ +
Sbjct: 414 LARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLI 457
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 109 bits (272), Expect = 1e-28
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G +TT+ + L L HPE+ K+ +E E V + +Q + M Y + + E R
Sbjct: 273 GTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQR 332
Query: 105 LYPPVPVIARQLY-APLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLE--- 160
+P +K N L+P G +I I++ + FPNP F+P FL+
Sbjct: 333 YIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGG 392
Query: 161 KFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRL 212
FK ++PFS G R C+G+ +A M + + IL+ + + S V PKNL
Sbjct: 393 NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDT 444
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 96.3 bits (238), Expect = 5e-24
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 46 HDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRL 105
H+TT+G+ S+ LY L +P + +K +EA V D + + + + Y+ + E++RL
Sbjct: 264 HETTSGLLSFALYFLVKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALRL 322
Query: 106 YPPVPVIARQLYAPLKTPNM-LVPAGCSIFINVFEQHRIPEYF-PNPLEFNPDRFL-EKF 162
+P P + + G + + + + HR + + EF P+RF
Sbjct: 323 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA 382
Query: 163 KHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY------------VVGSTVKPKNL 210
+A+ PF G R CIGQ+ A+ +++ +LK + T+KP+
Sbjct: 383 IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGF 442
Query: 211 RL 212
+
Sbjct: 443 VV 444
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 89.3 bits (220), Expect = 1e-21
Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 21/159 (13%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
+ ++ AL HP+ +E + + E ++E R
Sbjct: 238 PIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRR 280
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
YP P + + N G S+ ++++ + P + +P EF P+RF E+ ++
Sbjct: 281 YYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREEN 340
Query: 165 PYAYVPFSTG----PRNCIGQKVAMMSQKILIAKILKRY 199
+ +P G C G+ + + K + ++ +
Sbjct: 341 LFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQI 379
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 83.8 bits (205), Expect = 2e-19
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 92 MDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPL 151
+ LE +KE++RL+PP+ ++ R + + G + + +RIPE FP+P
Sbjct: 300 IPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH 359
Query: 152 EFNPDRFL----EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKP 207
+F P R+ E + + ++PF G C+G A+M K + + +L+ Y P
Sbjct: 360 DFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPP 419
Query: 208 KNLR 211
++ R
Sbjct: 420 ESYR 423
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 82.2 bits (201), Expect = 5e-19
Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 32/175 (18%)
Query: 39 WSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERC 98
+ GHDTT+ + + L +PE + + R
Sbjct: 262 VAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD------------------PALIPRL 303
Query: 99 IKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRF 158
+ E++R PV R A + + G I ++ +R E F NP EF+ RF
Sbjct: 304 VDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF 363
Query: 159 LEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
P ++ F G C+GQ +A + KI ++L + K++ L+
Sbjct: 364 ------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL--------KSVELS 404
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 81.0 bits (198), Expect = 1e-18
Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 29/168 (17%)
Query: 46 HDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRL 105
+ T + + + L HP+ ++ + +
Sbjct: 237 NATMVNMIALGVATLAQHPDQLAQLKAN-----------------PSLAPQFVEELCRYH 279
Query: 106 YPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHP 165
I R + + LV A I + +R E F NP EFN +R P
Sbjct: 280 TASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKW----PP 335
Query: 166 YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+ F G CI + +A + + + +++ +L++A
Sbjct: 336 QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF--------PDLKVA 375
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 81.0 bits (198), Expect = 1e-18
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 14/162 (8%)
Query: 52 VASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYPPVPV 111
L I I ++ + + + L P
Sbjct: 223 RGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSP 282
Query: 112 IARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPF 171
R L + G S+ ++ +R P P+ + R P +V F
Sbjct: 283 TPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR------EPIPHVAF 336
Query: 172 STGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
G +C+G +A + + + ++ +R+ LRLA
Sbjct: 337 GHGVHHCLGAALARLELRTVFTELWRRF--------PALRLA 370
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 78.7 bits (192), Expect = 7e-18
Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 32/169 (18%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMR 104
G + + + Y L HP+ + ++ L ++E +R
Sbjct: 240 GFEASVSLIGIGTYLLLTHPDQLALVRRD------------------PSALPNAVEEILR 281
Query: 105 LYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKH 164
P R ++ + +P ++ + +R P+ FP+P F+ R
Sbjct: 282 YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD------ 335
Query: 165 PYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
++ F G C+G+ +A + ++ + + R+ L L
Sbjct: 336 TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF--------PALSLG 376
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 77.2 bits (188), Expect = 3e-17
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 14/87 (16%)
Query: 127 VPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMM 186
+ G I + +R P++ + F+ R ++ F G C+G +A M
Sbjct: 303 IARGEPILASYAAANRHPDWHEDADTFDATRT------VKEHLAFGHGVHFCLGAPLARM 356
Query: 187 SQKILIAKILKRYVVGSTVKPKNLRLA 213
+ + + R+ +LRLA
Sbjct: 357 EVTLALESLFGRF--------PDLRLA 375
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 76.0 bits (185), Expect = 8e-17
Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 31/168 (18%)
Query: 46 HDTTAGVASWTLYALGHHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRL 105
+T AG+ + + AL +P E + + + L
Sbjct: 244 VETVAGMIGFGVLALLDNPGQIELLFES-----------------PEKAERVVNELVRYL 286
Query: 106 YPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHP 165
P R + L+ AG + ++ +R P+P + +R
Sbjct: 287 SPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA------A 340
Query: 166 YAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
+ V F G C+G +A ++ + +R+ LRLA
Sbjct: 341 VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRF--------PGLRLA 380
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 74.4 bits (181), Expect = 3e-16
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 140 QHRIPEYFPNPLEFNPDRFL-EKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKR 198
+FP+ F P+RFL E+ Y PF G R C+G+ A++ I++ +R
Sbjct: 297 YVTQRLHFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRR 356
Query: 199 Y----------VVGSTVKPKN 209
+ + T++P+
Sbjct: 357 FRLDPLPFPRVLAQVTLRPEG 377
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 74.1 bits (180), Expect = 3e-16
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 124 NMLVPAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKV 183
+ + AG +++++ +R PE FP+P + +R P +V F GP C G +
Sbjct: 298 GVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------SPNPHVSFGFGPHYCPGGML 351
Query: 184 AMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
A + ++L+ +L R L+LA
Sbjct: 352 ARLESELLVDAVLDRV--------PGLKLA 373
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 74.1 bits (180), Expect = 4e-16
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 128 PAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMS 187
G +F+ + R F P F+ R A + + GP C G +A +
Sbjct: 306 KKGEMVFLLIPSALRDGTVFSRPDVFDVRRD------TSASLAYGRGPHVCPGVSLARLE 359
Query: 188 QKILIAKILKRY 199
+I + I +R+
Sbjct: 360 AEIAVGTIFRRF 371
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 73.7 bits (179), Expect = 4e-16
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 128 PAGCSIFINVFEQHRIPEYFPNPLEFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMS 187
G + + + + PE+FPNP DR +P +++ F G C G +
Sbjct: 299 RKGELVLVLLEGANFDPEHFPNPGSIELDRP-----NPTSHLAFGRGQHFCPGSALGRRH 353
Query: 188 QKILIAKILKRYVVGSTVKPKNLRLA 213
+I I +LK+ + LA
Sbjct: 354 AQIGIEALLKKM--------PGVDLA 371
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 72.1 bits (175), Expect = 2e-15
Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 98 CIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPE-YFPNPLEFNPD 156
+ P V+ R + + ++PAG ++ ++ R + P F+
Sbjct: 272 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLT 331
Query: 157 RFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLRLA 213
R ++ F GP C G ++ M + + + R+ +L LA
Sbjct: 332 RT-----SGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF--------PHLDLA 375
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 70.1 bits (170), Expect = 7e-15
Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 14/122 (11%)
Query: 92 MDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPL 151
E + + R L + + + + G I + P+
Sbjct: 267 RPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPM 326
Query: 152 EFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
+ R ++ F G C+GQ +A + + + L R +
Sbjct: 327 HVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI--------PDFS 372
Query: 212 LA 213
+A
Sbjct: 373 IA 374
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 69.1 bits (167), Expect = 2e-14
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 92 MDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPL 151
+ ++E++R PPV R +K + ++ G + + + +R E F +P
Sbjct: 237 EKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPD 296
Query: 152 EFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRYVVGSTVKPKNLR 211
F PDR P ++ F +G C+G +A + +I + + K++ V VK + +
Sbjct: 297 SFIPDR------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKID 350
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 68.0 bits (164), Expect = 4e-14
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 92 MDYLERCIKESMRLYPPVPVIARQLYAPLKTPNMLVPAGCSIFINVFEQHRIPEYFPNPL 151
+ + I+E++R PPV R+ +K + + G + + + +R E F +
Sbjct: 237 ENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 152 EFNPDRFLEKFKHPYAYVPFSTGPRNCIGQKVAMMSQKILIAKILKRY 199
+F PDR +P ++ F +G C+G +A + +I I + KR+
Sbjct: 297 KFIPDR------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>d2gtta1 a.260.1.1 (A:6-448) Nucleoprotein {Rabies virus [TaxId:
11292]}
Length = 443
Score = 29.5 bits (66), Expect = 0.30
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 156 DRFLEKFKHPYAYVPFST 173
D F + +H Y+ + T
Sbjct: 206 DMFFSRIEHLYSAIRVGT 223
>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}
Length = 461
Score = 29.6 bits (65), Expect = 0.32
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 38 VWSKDATGHDTTAGVASWTLYALGH-HPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLE 96
+ D G+ + + +G+ HP + + + Q F + P + L +++E
Sbjct: 45 NYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRP-ALGILPPENFVE 103
Query: 97 RCIKE 101
+ +
Sbjct: 104 KLRES 108
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700
{Enterococcus faecalis [TaxId: 1351]}
Length = 84
Score = 26.9 bits (60), Expect = 0.62
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 39 WSKDATGHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGF 79
+ DT AG + + ALG P+ EK E ++
Sbjct: 28 TDLHMSDVDTMAG---YLITALGTIPDEGEKPSFEVGNIKL 65
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 291
Score = 26.4 bits (58), Expect = 2.8
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 93 DYLERCIKESM-RLYPPVPVIARQLYAPLKTPNMLVPAGCSIFIN-VFEQHRIP----EY 146
L+ + +S L +L P + AG + V Q + +
Sbjct: 123 AKLKEIVADSDVMLKEGYENFFGKLQQ-HGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV 181
Query: 147 FPNPLEFNPDRFLEKFKHPY 166
N ++F+ + L+ FK
Sbjct: 182 VSNFMDFDENGVLKGFKGEL 201
>d1jkza_ g.3.7.5 (A:) Defensin 1 (PSD1) {Pea (Pisum sativum)
[TaxId: 3888]}
Length = 46
Score = 24.1 bits (52), Expect = 2.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 9 LSRSSCDRRCKSKAGLQS 26
+ +SCD CK+KA L S
Sbjct: 15 FTNASCDDHCKNKAHLIS 32
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa
[TaxId: 2371]}
Length = 87
Score = 25.0 bits (55), Expect = 3.0
Identities = 6/35 (17%), Positives = 11/35 (31%), Gaps = 3/35 (8%)
Query: 36 IPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKI 70
+ + + T AG + G P + E
Sbjct: 30 AELPDGEENNYHTLAG---MCISYFGRIPHVGEYF 61
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein
Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId:
1718]}
Length = 98
Score = 24.8 bits (54), Expect = 3.7
Identities = 3/35 (8%), Positives = 9/35 (25%), Gaps = 3/35 (8%)
Query: 45 GHDTTAGVASWTLYALGHHPEIQEKIVQEAESVGF 79
++T +G + + I +
Sbjct: 34 DYETISG---LLFDHANALLKTGDVIEIPLDFEPE 65
>d3deda1 d.145.1.4 (A:341-427) Probable hemolysin CV0231
{Chromobacterium violaceum [TaxId: 536]}
Length = 87
Score = 24.7 bits (54), Expect = 4.5
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 36 IPVWSKDATGHDTTAGVASWTLYALGHHPEIQEKI 70
P+ + T AG LY LG P + ++
Sbjct: 30 APLPGEAGGNIHTLAG---VMLYQLGRVPSVTDRF 61
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 24.1 bits (52), Expect = 5.5
Identities = 10/46 (21%), Positives = 16/46 (34%)
Query: 62 HHPEIQEKIVQEAESVGFYDGPVTIQTLASMDYLERCIKESMRLYP 107
PE + Q +G ++ A YL + +LYP
Sbjct: 39 MKPEFLKINPQHCIPTLVDNGFALWESRAICTYLAEKYGKDDKLYP 84
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.410
Gapped
Lambda K H
0.267 0.0679 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 826,280
Number of extensions: 38316
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 30
Length of query: 215
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 133
Effective length of database: 1,281,736
Effective search space: 170470888
Effective search space used: 170470888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.5 bits)