Query psy2561
Match_columns 134
No_of_seqs 161 out of 1316
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 19:22:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2561.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2561hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 1.5E-38 5.2E-43 276.1 11.0 129 2-131 463-591 (623)
2 4fkc_A XAA-Pro aminopeptidase; 99.9 1E-26 3.5E-31 189.6 9.0 92 2-111 283-376 (377)
3 3biq_A FACT complex subunit SP 99.9 1E-26 3.5E-31 194.4 8.5 104 2-122 338-455 (467)
4 3q6d_A Proline dipeptidase; st 99.9 1.1E-26 3.8E-31 188.1 8.4 92 2-111 262-355 (356)
5 2zsg_A Aminopeptidase P, putat 99.9 1.8E-26 6E-31 186.5 8.5 92 2-111 265-358 (359)
6 1wn1_A Dipeptidase; prolidase, 99.9 2.7E-26 9.2E-31 186.8 8.4 92 2-111 262-355 (356)
7 4ege_A Dipeptidase PEPE; struc 99.9 3.5E-26 1.2E-30 187.8 8.4 94 2-113 282-377 (378)
8 3cb6_A FACT complex subunit SP 99.9 1.2E-25 4.2E-30 186.5 8.2 96 2-114 330-439 (444)
9 3tb5_A Methionine aminopeptida 99.9 1.6E-25 5.5E-30 175.2 8.3 98 3-114 142-257 (264)
10 3ig4_A XAA-Pro aminopeptidase; 99.9 6.4E-26 2.2E-30 189.6 6.0 104 2-127 304-422 (427)
11 1wy2_A XAA-Pro dipeptidase; st 99.9 2.5E-25 8.5E-30 180.8 8.5 89 2-109 259-350 (351)
12 3mx6_A Methionine aminopeptida 99.9 5E-25 1.7E-29 172.6 9.0 94 2-110 145-258 (262)
13 2gg2_A Methionine aminopeptida 99.9 3.4E-24 1.2E-28 167.5 8.9 95 2-110 143-255 (263)
14 1qxy_A Methionyl aminopeptidas 99.9 7.5E-24 2.5E-28 164.3 8.4 92 2-108 141-251 (252)
15 4fuk_A Methionine aminopeptida 99.9 4.9E-24 1.7E-28 173.0 7.5 92 3-108 201-310 (337)
16 3s6b_A Methionine aminopeptida 99.9 8.2E-24 2.8E-28 174.4 8.5 97 2-112 243-358 (368)
17 3tav_A Methionine aminopeptida 99.9 8.9E-24 3.1E-28 167.7 8.0 91 2-106 172-286 (286)
18 3pka_A Methionine aminopeptida 99.9 1.7E-23 5.9E-28 166.1 9.0 89 2-104 178-284 (285)
19 2v3z_A XAA-Pro aminopeptidase; 99.9 2.8E-23 9.7E-28 173.4 9.6 95 2-114 308-432 (440)
20 4b28_A Metallopeptidase, famil 99.9 3.9E-24 1.3E-28 180.7 3.5 97 2-113 368-468 (470)
21 1kp0_A Creatine amidinohydrola 99.9 3.8E-23 1.3E-27 169.4 9.0 96 2-111 295-397 (402)
22 1o0x_A Methionine aminopeptida 99.9 8.4E-23 2.9E-27 160.0 8.4 89 2-104 154-260 (262)
23 3rva_A Organophosphorus acid a 99.9 6.1E-23 2.1E-27 172.7 8.0 92 2-107 293-441 (451)
24 1chm_A Creatine amidinohydrola 99.9 1.3E-22 4.3E-27 167.1 9.1 96 2-111 295-397 (401)
25 2b3h_A Methionine aminopeptida 99.9 1.9E-22 6.7E-27 163.7 8.9 94 2-109 212-325 (329)
26 2iw2_A XAA-Pro dipeptidase; me 99.9 2.5E-22 8.6E-27 170.1 9.5 101 2-116 325-480 (494)
27 3l24_A XAA-Pro dipeptidase; PI 99.9 1.1E-21 3.7E-26 167.7 8.9 93 2-108 290-440 (517)
28 2q8k_A Proliferation-associate 99.8 2.7E-18 9.3E-23 142.5 12.1 110 3-126 169-366 (401)
29 1xgs_A Methionine aminopeptida 99.7 4E-18 1.4E-22 136.2 9.6 75 2-78 126-201 (295)
30 1b6a_A Methionine aminopeptida 99.6 3.8E-16 1.3E-20 132.4 8.0 64 2-68 295-369 (478)
31 2nw5_A Methionine aminopeptida 99.5 7.6E-15 2.6E-19 120.5 4.5 70 3-76 177-257 (360)
32 3fm3_A Methionine aminopeptida 99.5 1.2E-13 4E-18 113.1 7.8 62 3-67 175-247 (358)
33 4b6a_t Probable metalloproteas 87.3 1.1 3.6E-05 39.1 6.1 32 3-34 240-272 (614)
34 3fm3_A Methionine aminopeptida 70.2 11 0.00039 30.0 6.5 77 3-84 71-150 (358)
35 2nw5_A Methionine aminopeptida 67.8 6.2 0.00021 31.8 4.5 39 54-104 318-356 (360)
36 2e9x_A DNA replication complex 63.8 2.9 0.0001 29.5 1.6 19 114-132 103-121 (149)
37 3kmh_A D-lyxose isomerase; cup 51.9 15 0.00053 28.3 4.0 38 49-86 171-213 (246)
38 2q9q_C DNA replication complex 51.0 6.7 0.00023 28.8 1.8 19 114-132 103-121 (196)
39 4fuk_A Methionine aminopeptida 42.9 96 0.0033 24.1 7.5 77 3-84 95-173 (337)
40 2y0o_A Probable D-lyxose ketol 42.5 18 0.00063 26.3 3.0 32 50-85 119-151 (175)
41 2b3h_A Methionine aminopeptida 38.8 1.3E+02 0.0043 23.5 7.6 77 3-84 107-185 (329)
42 2e9x_D GINS complex subunit 4; 38.7 13 0.00046 27.7 1.8 18 115-132 120-137 (223)
43 3tb5_A Methionine aminopeptida 37.2 1.2E+02 0.0042 22.2 7.3 76 4-84 37-114 (264)
44 4ard_A Capsid protein P27; vir 37.0 8.4 0.00029 26.5 0.3 31 98-130 31-62 (116)
45 3mx6_A Methionine aminopeptida 33.3 1.4E+02 0.0049 21.9 7.6 75 4-83 41-117 (262)
46 1byy_A Protein (sodium channel 33.2 22 0.00075 20.7 1.7 16 116-131 16-31 (53)
47 3s6b_A Methionine aminopeptida 33.1 1.5E+02 0.0051 23.7 7.2 74 3-83 135-212 (368)
48 3pka_A Methionine aminopeptida 28.8 1.8E+02 0.0063 21.7 7.6 77 3-84 73-151 (285)
49 1o9y_A HRCQ2; secretory protei 26.1 47 0.0016 20.8 2.6 11 53-63 35-45 (84)
50 4b6a_t Probable metalloproteas 25.1 1.7E+02 0.0057 25.5 6.5 34 51-85 151-184 (614)
51 3uep_A YSCQ-C, type III secret 23.5 56 0.0019 21.1 2.6 11 53-63 39-49 (96)
52 2hbp_A Cytoskeleton assembly c 22.2 1.5E+02 0.005 18.3 4.4 52 67-130 8-59 (68)
53 3ge3_C Toluene-4-monooxygenase 21.3 22 0.00075 23.0 0.2 32 28-61 37-68 (84)
54 1o6a_A Putative flagellar moto 20.0 72 0.0025 20.4 2.6 11 53-63 39-49 (96)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=276.14 Aligned_cols=129 Identities=52% Similarity=0.929 Sum_probs=119.0
Q ss_pred CchHHHHHHHHHHHHHcCCCCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeEE
Q psy2561 2 SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQ 81 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v~ 81 (134)
+++.+||+++|+++++.|++|.|++|||||+|+++||+|..++.. .+++.+|+||||||+|||+|.+|.+|+|+||+|+
T Consensus 463 ~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~-~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd~vl 541 (623)
T 3ctz_A 463 TKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYK-TFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVL 541 (623)
T ss_dssp CBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTT-CSCSCBCCTTCEEEECCEEEETTTEEEECBEEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCC-CCCCCccCCCeEEEEeCcEEECCceEEEEeeEEE
Confidence 468899999999999999999999999999999999999855542 1357789999999999999999999999999999
Q ss_pred EecCCccccCCCceeeeeeeccCCCccchhhhhccCCHHHHHHHHhhhhh
Q psy2561 82 VIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLFI 131 (134)
Q Consensus 82 Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~~ll~~~e~~wln~y~~~ 131 (134)
||++++..+|++.+|||||+||.+|+++++|+.+|||++|++|||+||+.
T Consensus 542 Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~ 591 (623)
T 3ctz_A 542 VVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLT 591 (623)
T ss_dssp EEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHH
T ss_pred EecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99987667788899999999999999999999999999999999999985
No 2
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.93 E-value=1e-26 Score=189.61 Aligned_cols=92 Identities=33% Similarity=0.495 Sum_probs=84.9
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.+++++++++++++++.|| .+.|++||||| +++||.|.+ ++ +++.+|+||||||||||+|.+|.+|+|+||+
T Consensus 283 ~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~i-~~---~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~ 356 (377)
T 4fkc_A 283 IPAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPYI-SP---GNKKILKDGMVFTIEPGIYLQGKFGVRIEDD 356 (377)
T ss_dssp CBHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEEE-CS---SCCCBCCTTCEEEECCEEEETTTEEEECBEE
T ss_pred cchhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCcc-cC---CCCCEeCCCCEEEECCeeEECCccEEEEccE
Confidence 4689999999999999999 48999999999 999999984 44 5788999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 80 VQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||++ |+|+||..|+++..
T Consensus 357 v~Vt~~------------g~e~Lt~~p~eli~ 376 (377)
T 4fkc_A 357 VALVDK------------KGIRLTNADRELIT 376 (377)
T ss_dssp EEEETT------------EEEESCCSCCSCCB
T ss_pred EEEECC------------CcEECCCCCCCeEe
Confidence 999999 99999999998754
No 3
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.93 E-value=1e-26 Score=194.42 Aligned_cols=104 Identities=11% Similarity=0.110 Sum_probs=90.4
Q ss_pred CchHHHHHHHHHHHHHcC--C--CCCCcceeecCCCCcccCCCCcCCCCCCCC-CCcccCCceeeecCcee-e-----cC
Q psy2561 2 SQGHAIDAIARHNLWSVG--L--DYLHGTGHGIGSYLNVHEGPISVSYLPKAT-DSGILADMFISDEPGYY-E-----DG 70 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G--~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~-~~~L~~GMV~tiEPgiy-~-----~g 70 (134)
+++++|++++|+++++.| | +|.|++||||| +++||.|.+++. ++ +.+|++|||||||||+| + ++
T Consensus 338 ~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiG--l~~hE~p~~~~~---~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g 412 (467)
T 3biq_A 338 RTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--LEFRDSNFILNV---KNDYRKIQRGDCFNISFGFNNLKDSQSAN 412 (467)
T ss_dssp CCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSCCGGGBSST---TCCSCCCCTTCEEEEEEEEEEECCSSCSS
T ss_pred CcHHHHHHHHHHHHHHhCcchhhcCCCCcccccc--cccccCCccCCC---CCCCCccCCCCEEEEeCeEEeeecCCCCC
Confidence 478999999999999997 5 48999999999 999999975655 46 78999999999999999 7 88
Q ss_pred cceEEEeeeEEEe--cCCccccCCCceeeeeeecc-CCCccchhhhhccCCHHHH
Q psy2561 71 KFGIRIENIVQVI--PAETKYSRKNKTFLTFKTIT-LVPIQTSLLCCNMLTADEV 122 (134)
Q Consensus 71 ~~gvried~v~Vt--~~~~~~~~~~~~~~G~e~LT-~~P~~~~~i~~~ll~~~e~ 122 (134)
.+|+|+||+|+|| ++ |+|+|| .+|+++.+|+..|++++|-
T Consensus 413 ~~gvriEd~v~Vt~~~~------------G~e~Lt~~~p~~~~~i~~~~~~~~e~ 455 (467)
T 3biq_A 413 NYALQLADTVQIPLDET------------EPPRFLTNYTKAKSQISFYFNNEEED 455 (467)
T ss_dssp CEEEEEEEEEECCSSTT------------SCCEESCCSCCCHHHHEECC------
T ss_pred ccEEEEEEEEEEecCCC------------CcEEecccCCCCHHHHHHHHhccccc
Confidence 9999999999999 88 999999 9999999999999998883
No 4
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.93 E-value=1.1e-26 Score=188.14 Aligned_cols=92 Identities=34% Similarity=0.528 Sum_probs=84.7
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.++++|++++|++++++|| ++.|++||||| +++||.|.+ +. +++.+|+||||||+|||+|.+|.+|+|+||+
T Consensus 262 ~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~---~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~ 335 (356)
T 3q6d_A 262 LTGREADALTRDYITEKGYGEYFGHSTGHGIG--LEIHEAPGL-AF---RSDTVLEPGMAVTVEPGIYIPGIGGVRIEDD 335 (356)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-ST---TCCCBCCTTCEEEECCEEEETTTEEEECBEE
T ss_pred CcHHHHHHHHHHHHHHcCCcccCCCCCcccCC--CCcCcCCCC-CC---CCCCCcCCCCEEEECCEEEECCCCeEEEccE
Confidence 4789999999999999999 58999999999 999999974 43 4678999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 80 VQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||++ |+|+||..|+++.+
T Consensus 336 v~vt~~------------G~e~Lt~~p~~l~~ 355 (356)
T 3q6d_A 336 IIVTSE------------GNEVITKSPKELII 355 (356)
T ss_dssp EEECSS------------SEEECCCSCCSCCB
T ss_pred EEEeCC------------cceeCCCCCcceEe
Confidence 999999 99999999998754
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.93 E-value=1.8e-26 Score=186.54 Aligned_cols=92 Identities=38% Similarity=0.653 Sum_probs=84.4
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.++++|+++++++++++|| +|.|++||||| +++||.|. ++. +++.+|+||||||||||+|.+|.+|+|+||+
T Consensus 265 ~~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~---~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~ 338 (359)
T 2zsg_A 265 VTGKLLDSVAREFIREKGYGEFFGHSLGHGIG--LEVHEGPA-ISF---RNDSPLPENVVFTVEPGIYLEGKFGIRIEED 338 (359)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGBCSCSEEECS--SSSSEEEE-EST---TCCCBCCTTBEEEECCEEEETTTEEEECBEE
T ss_pred CCHHHHHHHHHHHHHHcCCcccCCCCCccccC--cccCCCCC-cCC---CCCCCcCCCCEEEECCEEEECCCcEEEEeeE
Confidence 4789999999999999999 58899999999 99999996 444 4678999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 80 VQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||++ |+|+||.+|+++.+
T Consensus 339 v~vt~~------------g~e~Lt~~~~~l~~ 358 (359)
T 2zsg_A 339 VVLKEQ------------GCEILTTLPRSIFV 358 (359)
T ss_dssp EEEETT------------EEEECCCSCCSCEE
T ss_pred EEEcCC------------cceECCCCCcccee
Confidence 999999 99999999998753
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=99.93 E-value=2.7e-26 Score=186.80 Aligned_cols=92 Identities=29% Similarity=0.436 Sum_probs=84.8
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.++++|+++++++++++|| +|.|++||||| +++||.|.+ +. +++.+|+||||||||||+|.+|.+|+|+||+
T Consensus 262 ~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~---~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~ 335 (356)
T 1wn1_A 262 IKAKDVDSRAREVISKAGYGEYFIHRTGHGLG--LDVHEEPYI-GP---DGEVILKNGMTFTIEPGIYVPGLGGVRIEDD 335 (356)
T ss_dssp SBHHHHHHHHHHHHHTTTCGGGCCSCSEEECS--SSSSEEEEE-ST---TCCCBCCTTCEEEECCEEEETTTEEEECBEE
T ss_pred CcHHHHHHHHHHHHHHcCCcccCCCCCcccCC--CccCCCccc-CC---CCCCCcCCCCEEEECCeeEeCCCcEEEEeeE
Confidence 4789999999999999999 58999999999 999999984 43 4678999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 80 VQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||++ |+|+||.+|+++.+
T Consensus 336 v~Vt~~------------g~e~Lt~~p~~l~~ 355 (356)
T 1wn1_A 336 IVVDEG------------KGRRLTKAERELII 355 (356)
T ss_dssp EEEETT------------EEEESCCCCCSCCB
T ss_pred EEEeCC------------ccEECCCCCCccee
Confidence 999999 99999999998754
No 7
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.93 E-value=3.5e-26 Score=187.85 Aligned_cols=94 Identities=38% Similarity=0.555 Sum_probs=86.4
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.++++||+++|++++++|| +|.|++||||| +++||.|.+. . +++.+|+||||||||||+|.+|.+|+|+||+
T Consensus 282 ~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~i~-~---~~~~~L~~Gmv~tiEPgiy~~g~~gvriEd~ 355 (378)
T 4ege_A 282 VTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPYIV-A---GNELPLVAGMAFSIEPGIYFPGRWGARIEDI 355 (378)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEEC-T---TCCCBCCTTBEEEECCEEEETTTEEEECBEE
T ss_pred CcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCccC-C---CCCCccCCCCEEEECCEEEeCCccEEEEeeE
Confidence 4689999999999999999 48999999999 9999999854 3 4678999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeeeeccCCCccchhhh
Q psy2561 80 VQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLC 113 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~ 113 (134)
|+||++ |+|+||..|+++.+++
T Consensus 356 v~Vt~~------------G~e~Lt~~p~~l~~~~ 377 (378)
T 4ege_A 356 VVVTEN------------GALSVNNRPHELMVVP 377 (378)
T ss_dssp EEEETT------------EEEESCCSCCSCEEEC
T ss_pred EEEeCC------------cCeECCCCCCccEEcc
Confidence 999999 9999999999987653
No 8
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.92 E-value=1.2e-25 Score=186.52 Aligned_cols=96 Identities=15% Similarity=0.180 Sum_probs=86.8
Q ss_pred CchHHHHHHHHHHHHHc--CC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCcee-e--------
Q psy2561 2 SQGHAIDAIARHNLWSV--GL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYY-E-------- 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~--G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy-~-------- 68 (134)
.++++|++++++++++. || +|.|++||||| +++||.|.+++. +++.+|+||||||||||+| .
T Consensus 330 ~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~~~~~---~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~ 404 (444)
T 3cb6_A 330 AVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG--IEFRESSLLVNA---KNPRVLQAGMTLNLSIGFGNLINPHPKNS 404 (444)
T ss_dssp CBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSCBGGGCCST---TCCCBCCTTCEEEEEEEEEEEECSSCCTT
T ss_pred CcHHHHHHHHHHHHHhhhhhhHhhcccccccccC--ccccCCccccCC---CCCcccCCCCEEEEEeccccccCcccccc
Confidence 47899999999999999 57 38999999999 999999865554 5688999999999999999 5
Q ss_pred -cCcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCccchhhhh
Q psy2561 69 -DGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCC 114 (134)
Q Consensus 69 -~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~ 114 (134)
++.+|+|+||+|+||++ |+|+||.+|+++..|+.
T Consensus 405 ~~~~~gvriEd~v~vt~~------------g~e~Lt~~p~~l~~Ie~ 439 (444)
T 3cb6_A 405 QSKEYALLLIDTIQITRS------------DPIVFTDSPKAQGDISY 439 (444)
T ss_dssp SCSEEEEEEEEEEECCSS------------SCEETTCCCCSHHHHEE
T ss_pred cCCceEEEEEEEEEECCC------------CceecccCCCcHHHHHh
Confidence 67899999999999999 99999999999998876
No 9
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=99.92 E-value=1.6e-25 Score=175.15 Aligned_cols=98 Identities=19% Similarity=0.210 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeec------------
Q psy2561 3 QGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYED------------ 69 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~------------ 69 (134)
++++|+.++++++++.||. +.|++||||| +.+||.|.+.....++++.+|+|||||||||++|.+
T Consensus 142 ~~~di~~a~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt 219 (264)
T 3tb5_A 142 RIGDIGHAIQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWT 219 (264)
T ss_dssp BHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSC
T ss_pred CHHHHHHHHHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCe
Confidence 5789999999999999996 8899999999 999999986554444667899999999999999963
Q ss_pred -----CcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCccchhhhh
Q psy2561 70 -----GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCC 114 (134)
Q Consensus 70 -----g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~ 114 (134)
+..|+|+||+|+||++ |+|+||..|+++..|++
T Consensus 220 ~~~~~g~~gvriEd~vlVT~~------------G~e~LT~~p~el~~ie~ 257 (264)
T 3tb5_A 220 AYTEDGGLSCQYEHSLAITKE------------GPRILTSQGEELTYLEH 257 (264)
T ss_dssp EEETTCCCEEECCEEEECCTT------------CCEETTCCSSTTCC---
T ss_pred EEecCCccEEEeceEEEEcCC------------cCEECCCCCcchhhhhc
Confidence 4559999999999999 99999999999988875
No 10
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=99.92 E-value=6.4e-26 Score=189.63 Aligned_cols=104 Identities=25% Similarity=0.334 Sum_probs=90.7
Q ss_pred CchHHHHHHHHHHHHHc----C-------C--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceee
Q psy2561 2 SQGHAIDAIARHNLWSV----G-------L--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYE 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~----G-------~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~ 68 (134)
.++.+|++++++++++. | + .+.|++||||| +++||.|. ..+.+|+||||||||||+|+
T Consensus 304 ~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~~-------~~~~~L~~GMV~tiEPgiy~ 374 (427)
T 3ig4_A 304 LKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVGT-------YKDRVLEEGMVITIEPGLYI 374 (427)
T ss_dssp CBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCCC-------CTTCBCCTTCEEEECCEEEE
T ss_pred CcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCCC-------CCCCEeCCCCEEEECCEEEE
Confidence 36789999999999886 3 4 37899999999 99999874 24688999999999999999
Q ss_pred cCcc-eEEEeeeEEEecCCccccCCCceeeeeeeccC-CCccchhhhhccCCHHHHHHHHh
Q psy2561 69 DGKF-GIRIENIVQVIPAETKYSRKNKTFLTFKTITL-VPIQTSLLCCNMLTADEVSRIEY 127 (134)
Q Consensus 69 ~g~~-gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~-~P~~~~~i~~~ll~~~e~~wln~ 127 (134)
++.+ |+|+||+|+||++ |+|+||. +|+++..|+. +|...++.|||+
T Consensus 375 ~~~g~GvriEd~vlVt~~------------G~e~LT~~~pk~~~~IE~-~m~~~~~~~~~~ 422 (427)
T 3ig4_A 375 EEESIGIRIEDDILVTKD------------GHENLSKDIIREVEEIEE-FMRENNVNVKQD 422 (427)
T ss_dssp GGGTEEEECBEEEEECSS------------SEEETTTTSCCSHHHHHH-HHHHHCTTC---
T ss_pred CCCceEEEEeeEEEEeCC------------cCeECCCCCCCCHHHHHH-HHccCccccccC
Confidence 8875 9999999999999 9999996 8999999997 779999999994
No 11
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.92 E-value=2.5e-25 Score=180.79 Aligned_cols=89 Identities=30% Similarity=0.435 Sum_probs=81.9
Q ss_pred CchHHHHHHHHHHHHHcCC--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 2 SQGHAIDAIARHNLWSVGL--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
.++++|+++++++++++|| ++.|++||||| +++||.|.+ +. +++.+|+||||||||||+|.+|.+|+|+||+
T Consensus 259 ~~~~~v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~p~i-~~---~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~ 332 (351)
T 1wy2_A 259 ITAKELDSIARNIIAEYGYGEYFNHSLGHGVG--LEVHEWPRV-SQ---YDETVLREGMVITIEPGIYIPKIGGVRIEDT 332 (351)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-ST---TCCCBCCTTCEEEECCEEEETTTEEEECBEE
T ss_pred CcHHHHHHHHHHHHHHcCCcccCCCCcccccC--CCcCCCCcc-CC---CCCCCcCCCCEEEECCEEEeCCCCeEEEeeE
Confidence 4789999999999999999 48999999999 999999974 44 4678999999999999999999999999999
Q ss_pred EEEecCCccccCCCceeeeee-eccCCCccc
Q psy2561 80 VQVIPAETKYSRKNKTFLTFK-TITLVPIQT 109 (134)
Q Consensus 80 v~Vt~~~~~~~~~~~~~~G~e-~LT~~P~~~ 109 (134)
|+|| + |+| +||..|+++
T Consensus 333 v~Vt-~------------G~e~~Lt~~p~~l 350 (351)
T 1wy2_A 333 ILIT-K------------NGSKRLTKTEREL 350 (351)
T ss_dssp EEEE-T------------TEEEESCCSCSCC
T ss_pred EEEC-C------------CceecCCCCCccc
Confidence 9999 9 999 999999875
No 12
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=99.91 E-value=5e-25 Score=172.57 Aligned_cols=94 Identities=23% Similarity=0.306 Sum_probs=83.5
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEE----
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRI---- 76 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvri---- 76 (134)
.++++|+++++++++++||. +.|++||||| +++||.|.+.++..++++.+|++||||||||++|. +.+|+|+
T Consensus 145 ~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~-g~~gvri~~~d 221 (262)
T 3mx6_A 145 AKLGDIGYAIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINA-GNYDTILSKLD 221 (262)
T ss_dssp CBHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES-SCSCEEECTTT
T ss_pred CcHHHHHHHHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEc-CCCeEEEecCC
Confidence 36889999999999999996 7899999999 99999998665432357789999999999999997 7778777
Q ss_pred ---------------eeeEEEecCCccccCCCceeeeeeeccCCCccch
Q psy2561 77 ---------------ENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTS 110 (134)
Q Consensus 77 ---------------ed~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~ 110 (134)
||+|+||++ |+|+||..|+++.
T Consensus 222 ~w~~~~~~~~~~~~~Ed~v~Vt~~------------G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 222 GWTVTTRDKSLSAQFEHTIGVTKD------------GFEIFTLSPKKLD 258 (262)
T ss_dssp SCCEEETTCCCEEECBEEEEECSS------------SEEESCCCTTCCC
T ss_pred CceEEecCCCceeeeceEEEECCC------------cCeECCCCCcccC
Confidence 999999999 9999999999875
No 13
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=99.90 E-value=3.4e-24 Score=167.52 Aligned_cols=95 Identities=22% Similarity=0.238 Sum_probs=83.4
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeec-----------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYED----------- 69 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~----------- 69 (134)
.++++|++++++++++.||. +.|++||||| +++||.|.+.++..++++.+|++||||||||++|.+
T Consensus 143 ~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~ 220 (263)
T 2gg2_A 143 INLREIGAAIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGW 220 (263)
T ss_dssp CBHHHHHHHHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSS
T ss_pred CCHHHHHHHHHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCc
Confidence 36789999999999999996 8999999999 999999986654323567899999999999999973
Q ss_pred ------CcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCccch
Q psy2561 70 ------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTS 110 (134)
Q Consensus 70 ------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~ 110 (134)
+.+|+|+||+|+||++ |+|+||..|+++.
T Consensus 221 ~~~~~~g~~g~riEdtvlVt~~------------G~e~LT~~p~~l~ 255 (263)
T 2gg2_A 221 TVKTKDRSLSAQYEHTIVVTDN------------GCEILTLRKDDTI 255 (263)
T ss_dssp CEEETTCCCEEECBEEEEEETT------------EEEESSCCTTCCS
T ss_pred eEEecCCCeEEEEEEEEEECCC------------ccEEeCCCCcccC
Confidence 4568999999999999 9999999998865
No 14
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=99.90 E-value=7.5e-24 Score=164.34 Aligned_cols=92 Identities=24% Similarity=0.306 Sum_probs=80.1
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCC-CcCCCCCCCCCCcccCCceeeecCceee-----------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGP-ISVSYLPKATDSGILADMFISDEPGYYE----------- 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P-~~~~~~~~~~~~~L~~GMV~tiEPgiy~----------- 68 (134)
.++++|++++++++++.||. +.|++||||| +++||.| .+.++..++++.+|++||||||||++|.
T Consensus 141 ~~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~ 218 (252)
T 1qxy_A 141 TKLSNIGKAVHNTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNE 218 (252)
T ss_dssp CBTHHHHHHHHHHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSS
T ss_pred CCHHHHHHHHHHHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCC
Confidence 36789999999999999996 8999999999 9999999 7655532356789999999999999997
Q ss_pred ------cCcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCcc
Q psy2561 69 ------DGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQ 108 (134)
Q Consensus 69 ------~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~ 108 (134)
++.+|+|+||+|+||++ | |+||..|++
T Consensus 219 ~~~~~~~g~~g~riEdtvlVt~~------------G-e~Lt~~p~~ 251 (252)
T 1qxy_A 219 WAFETSDKSFVAQIEHTVIVTKD------------G-PILTTKIEE 251 (252)
T ss_dssp SCEECTTCCCEEEEEEEEECCTT------------C-CEETTCC--
T ss_pred ceEEecCCCcEEEEEEEEEECCC------------c-eEccCCCCC
Confidence 56689999999999999 9 999999875
No 15
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=99.90 E-value=4.9e-24 Score=173.04 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=79.2
Q ss_pred chHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeec------------
Q psy2561 3 QGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYED------------ 69 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~------------ 69 (134)
+.++++.++++++.+.|+. +.|++||||| +.+||.|.+..+..+++..+|+||||||||||+|.+
T Consensus 201 ~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt 278 (337)
T 4fuk_A 201 LYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWT 278 (337)
T ss_dssp BTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSC
T ss_pred cHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCe
Confidence 5789999999999999995 8999999999 999999986655444567789999999999999974
Q ss_pred -----CcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCcc
Q psy2561 70 -----GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQ 108 (134)
Q Consensus 70 -----g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~ 108 (134)
|.+|+|+||+|+||++ |+|+||..|..
T Consensus 279 ~~t~dg~~gvriEd~VlVTe~------------G~EvLT~~p~~ 310 (337)
T 4fuk_A 279 STTKDGRRSAQFEHTMVVTNG------------GVEIFTDWVDG 310 (337)
T ss_dssp EEETTCCCEEECBEEEEECSS------------SEEESSCCSSS
T ss_pred EEecCCceEEEeccEEEEcCC------------cCEECCCCCCC
Confidence 5679999999999999 99999986654
No 16
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=99.89 E-value=8.2e-24 Score=174.39 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=84.1
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceee------------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYE------------ 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~------------ 68 (134)
.++++|+++++++++++||. +.|++||||| +++||.|.+.++...+.+.+|++|||||||||+|.
T Consensus 243 ~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~w 320 (368)
T 3s6b_A 243 MFYKNIGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQW 320 (368)
T ss_dssp CBTHHHHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSCSCEEECTTSS
T ss_pred CcHHHHHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCcccccccCCCc
Confidence 46889999999999999996 8999999999 99999998765432235678999999999999997
Q ss_pred -----cCcceEEEeeeEEEecCCccccCCCceeeeeeeccC-CCccchhh
Q psy2561 69 -----DGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL-VPIQTSLL 112 (134)
Q Consensus 69 -----~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~-~P~~~~~i 112 (134)
+|.+|+|+||+|+||++ |+|+||. .|.+..++
T Consensus 321 t~~t~dG~~gvriEdtVlVTe~------------G~EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 321 TSATSDGKLSAQFEHTLLITNN------------GVEILTKRTQDSPPLG 358 (368)
T ss_dssp CEEETTCCCEEECBEEEEEETT------------EEEETTCCCTTCCCCS
T ss_pred eeEeeCCccEEEEeEEEEEcCC------------cCeECCCCCCCCcCce
Confidence 36689999999999999 9999996 67777655
No 17
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=99.89 E-value=8.9e-24 Score=167.72 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=79.9
Q ss_pred CchHHHHHHHHHHH----HHc--CCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeec-----
Q psy2561 2 SQGHAIDAIARHNL----WSV--GLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYED----- 69 (134)
Q Consensus 2 ~~~~~id~~~r~~l----~~~--G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~----- 69 (134)
.++++|++++++++ +++ ||. +.|++||||| +++||.|.+.++..++++.+|++||||||||++|.+
T Consensus 172 ~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~~ 249 (286)
T 3tav_A 172 NRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQTR 249 (286)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCceE
Confidence 46899999999999 999 995 7899999999 999999986543222577899999999999999974
Q ss_pred ------------CcceEEEeeeEEEecCCccccCCCceeeeeeeccCCC
Q psy2561 70 ------------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVP 106 (134)
Q Consensus 70 ------------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P 106 (134)
|.+|+|+||+|+||++ |+|+||..|
T Consensus 250 ~~~~~w~~~t~dg~~gvriEd~v~Vt~~------------G~e~LT~~p 286 (286)
T 3tav_A 250 VLADDWTVVTTDGSRAAHWEHTVAVTEA------------GPRILTMRP 286 (286)
T ss_dssp ECTTSSCEEETTCCCEEECBEEEECCTT------------SCEESSCCC
T ss_pred ecCCCceEEecCCCcEEEeeeEEEECCC------------cceeCCCCC
Confidence 4679999999999999 999999876
No 18
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=99.89 E-value=1.7e-23 Score=166.14 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=78.3
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeec-----------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYED----------- 69 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~----------- 69 (134)
.++++|++++++++++.||. +.|++||||| +++||.|.+.++..++++.+|++||||||||++|.+
T Consensus 178 ~~~~di~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw 255 (285)
T 3pka_A 178 RALSVIGRVIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGW 255 (285)
T ss_dssp SBTTHHHHHHHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSC
T ss_pred CcHHHHHHHHHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCCceeecCCCc
Confidence 36789999999999999996 8999999999 999999986543222567899999999999999974
Q ss_pred ------CcceEEEeeeEEEecCCccccCCCceeeeeeeccC
Q psy2561 70 ------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL 104 (134)
Q Consensus 70 ------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~ 104 (134)
+.+|+|+||+|+||++ |+|+||.
T Consensus 256 ~~~~~~g~~gvriEdtv~Vt~~------------G~e~LT~ 284 (285)
T 3pka_A 256 TVVTKDRKWTAQFEHTLLVTDT------------GVEILTC 284 (285)
T ss_dssp CEEETTCCCEEECBEEEEECSS------------SEEESSC
T ss_pred eEEecCCCcEEEEeeEEEECCC------------cCeECCC
Confidence 4678999999999999 9999995
No 19
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=99.89 E-value=2.8e-23 Score=173.37 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=82.0
Q ss_pred CchHHHHHHHHHHHHH----cC--------------C--CCCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceee
Q psy2561 2 SQGHAIDAIARHNLWS----VG--------------L--DYLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~----~G--------------~--~~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~t 61 (134)
.++.+|+.++++++.+ .| + .+.|++||||| +++||.|.+. . +++.+|+||||||
T Consensus 308 ~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiG--l~~he~p~~~-~---~~~~~L~~Gmv~t 381 (440)
T 2v3z_A 308 TSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVGVYG-Q---DRSRILEPGMVLT 381 (440)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCSCCC-G---GGCCCCCTTCEEE
T ss_pred CcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCC--cccccCCCcC-C---CCCCccCCCCEEE
Confidence 4678999999998753 33 4 37999999999 9999999743 2 3568899999999
Q ss_pred ecCceeecC---------cceEEEeeeEEEecCCccccCCCceeeeeeecc-CCCccchhhhh
Q psy2561 62 DEPGYYEDG---------KFGIRIENIVQVIPAETKYSRKNKTFLTFKTIT-LVPIQTSLLCC 114 (134)
Q Consensus 62 iEPgiy~~g---------~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT-~~P~~~~~i~~ 114 (134)
||||+|.++ .+|+|+||+|+||++ |+|+|| .+|+++..|+.
T Consensus 382 iEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~------------G~e~LT~~~p~~~~~Ie~ 432 (440)
T 2v3z_A 382 VAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKPEEIEA 432 (440)
T ss_dssp ECCEEEECTTCSSCGGGTTEEEECBEEEEEETT------------EEEESSTTSCCSHHHHHH
T ss_pred ECCEEEeCCccccccccceeEEEEeeEEEECCC------------cCeECCcccCCCHHHHHH
Confidence 999999987 579999999999999 999999 59999998876
No 20
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=99.88 E-value=3.9e-24 Score=180.74 Aligned_cols=97 Identities=21% Similarity=0.198 Sum_probs=85.0
Q ss_pred CchHHHHHHHHHHHHHcCCCCCCcceeecCCCCcccCCCCcCCCC---CCCCCCcccCCceeeecCceee-cCcceEEEe
Q psy2561 2 SQGHAIDAIARHNLWSVGLDYLHGTGHGIGSYLNVHEGPISVSYL---PKATDSGILADMFISDEPGYYE-DGKFGIRIE 77 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~~~~~~GHGIG~~l~vhE~P~~~~~~---~~~~~~~L~~GMV~tiEPgiy~-~g~~gvrie 77 (134)
.++++||+++|++++++|..+.|++||||| + +||.|.+..+. ..+++.+|+|||||||||++|. +|.+|+|+|
T Consensus 368 ~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~~~g~~GvriE 444 (470)
T 4b28_A 368 VMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISEEGGDFSIKLE 444 (470)
T ss_dssp CBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEECTTCSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeecCCCcEEEEEe
Confidence 478999999999999988777789999999 8 69999754321 1256789999999999999998 899999999
Q ss_pred eeEEEecCCccccCCCceeeeeeeccCCCccchhhh
Q psy2561 78 NIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLC 113 (134)
Q Consensus 78 d~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~ 113 (134)
|+|+||++ |+|+||.+|+++.+|.
T Consensus 445 d~vlVte~------------G~e~LT~~p~~l~li~ 468 (470)
T 4b28_A 445 DQVLITED------------GYENLTKYPFDPALMG 468 (470)
T ss_dssp EEEEECSS------------SEEECCCCCCCHHHHC
T ss_pred eEEEEeCC------------cCeECCCCCCcHHhcc
Confidence 99999999 9999999999998874
No 21
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.88 E-value=3.8e-23 Score=169.40 Aligned_cols=96 Identities=19% Similarity=0.162 Sum_probs=83.8
Q ss_pred CchHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCC-CCCCCCcccCCceeeecCceeec----CcceE
Q psy2561 2 SQGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYL-PKATDSGILADMFISDEPGYYED----GKFGI 74 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~-~~~~~~~L~~GMV~tiEPgiy~~----g~~gv 74 (134)
.++++|++++++++++.||. +.|++||||| +.+||.|..++.. ..+++.+|+||||||||||+|.+ +.+|+
T Consensus 295 ~~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~G~ 372 (402)
T 1kp0_A 295 ARCKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGY 372 (402)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCCCcE
Confidence 47899999999999999995 7899999999 9999988643210 11467899999999999999998 78899
Q ss_pred EEeeeEEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 75 RIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 75 ried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||+|+||++ |+|+||.+|++++.
T Consensus 373 ried~v~Vt~~------------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 373 REHDILVIKEN------------BTENITGFPFGPEH 397 (402)
T ss_dssp ECBEEEEEETT------------EEEECCCSCCSTTT
T ss_pred EEEEEEEEcCC------------cceECCCCCCchHH
Confidence 99999999999 99999999998764
No 22
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=99.88 E-value=8.4e-23 Score=160.03 Aligned_cols=89 Identities=22% Similarity=0.278 Sum_probs=78.5
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceee------------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYE------------ 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~------------ 68 (134)
.++++|++++++++++.||. +.|++||||| +++||.|.+.++..++++.+|+|||||||||++|.
T Consensus 154 ~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w 231 (262)
T 1o0x_A 154 IRLGDVSHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGW 231 (262)
T ss_dssp SBHHHHHHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSS
T ss_pred CcHHHHHHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceeecCCCc
Confidence 46899999999999999996 8999999999 99999998654432256789999999999999997
Q ss_pred -----cCcceEEEeeeEEEecCCccccCCCceeeeeeeccC
Q psy2561 69 -----DGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL 104 (134)
Q Consensus 69 -----~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~ 104 (134)
++.+|+|+||+|+||++ |+|+||.
T Consensus 232 ~~~~~~g~~gvriEdtvlVt~~------------G~e~LT~ 260 (262)
T 1o0x_A 232 TAVTVDGSRCAHFEHTILITEN------------GAEILTK 260 (262)
T ss_dssp CEEETTCCCEEECBEEEEECSS------------SEEESSC
T ss_pred eEEeeCCCcEEEEEEEEEECCC------------ccEeCCC
Confidence 35679999999999999 9999995
No 23
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=99.88 E-value=6.1e-23 Score=172.67 Aligned_cols=92 Identities=27% Similarity=0.252 Sum_probs=76.3
Q ss_pred CchHHHHHHHHHHHH-----------------HcCC---CCCCcceeecCCCCcccCCCCcCCCC-----------C-CC
Q psy2561 2 SQGHAIDAIARHNLW-----------------SVGL---DYLHGTGHGIGSYLNVHEGPISVSYL-----------P-KA 49 (134)
Q Consensus 2 ~~~~~id~~~r~~l~-----------------~~G~---~~~~~~GHGIG~~l~vhE~P~~~~~~-----------~-~~ 49 (134)
.++++|++++++++. +.|+ .|+|++||||| +++||.|.+.... + .+
T Consensus 293 ~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~~~~~l~ 370 (451)
T 3rva_A 293 VAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPDDHPFLR 370 (451)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCTTCTTCC
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCccccccccccccccccccccCC
Confidence 367899999999876 6677 38999999999 9999999754321 0 03
Q ss_pred CCCcccCCceeeecCceeec-------------------------CcceEEEeeeEEEecCCccccCCCceeeeeeeccC
Q psy2561 50 TDSGILADMFISDEPGYYED-------------------------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL 104 (134)
Q Consensus 50 ~~~~L~~GMV~tiEPgiy~~-------------------------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~ 104 (134)
++.+|+||||||||||+|++ |.+|+||||+|+||++ |+|+||.
T Consensus 371 ~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~------------G~e~LT~ 438 (451)
T 3rva_A 371 CTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRD------------KNENMTR 438 (451)
T ss_dssp CCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEEEHHH
T ss_pred CCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCC------------cceECCC
Confidence 56789999999999999983 5569999999999999 9999998
Q ss_pred CCc
Q psy2561 105 VPI 107 (134)
Q Consensus 105 ~P~ 107 (134)
.|.
T Consensus 439 ~~~ 441 (451)
T 3rva_A 439 DLD 441 (451)
T ss_dssp HTT
T ss_pred CCC
Confidence 654
No 24
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=99.87 E-value=1.3e-22 Score=167.10 Aligned_cols=96 Identities=21% Similarity=0.162 Sum_probs=82.1
Q ss_pred CchHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCC-CCCCCCCcccCCceeeecCceeec----CcceE
Q psy2561 2 SQGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSY-LPKATDSGILADMFISDEPGYYED----GKFGI 74 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~-~~~~~~~~L~~GMV~tiEPgiy~~----g~~gv 74 (134)
+++++|++++++++++.||. +.|++||||| +.+||.|...+. ...+++.+|+||||||||||+|.+ +.+|+
T Consensus 295 ~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~g~~Gv 372 (401)
T 1chm_A 295 ARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGY 372 (401)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCCCCCccCCCCEEEEcCeeeeccccCCCCeE
Confidence 47899999999999999993 6799999999 999997642111 011467899999999999999998 78899
Q ss_pred EEeeeEEEecCCccccCCCceeeeeeeccCCCccchh
Q psy2561 75 RIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSL 111 (134)
Q Consensus 75 ried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~ 111 (134)
|+||+|+||++ |+|+||.+|+++..
T Consensus 373 riEd~vlVt~~------------G~e~LT~~p~~~~~ 397 (401)
T 1chm_A 373 REHDILIVNEN------------GAENITKFPYGPEK 397 (401)
T ss_dssp ECBEEEEEETT------------EEEECCCSCCSHHH
T ss_pred EEeeeEEECCC------------cceECCCCCCChhh
Confidence 99999999999 99999999998764
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=99.87 E-value=1.9e-22 Score=163.70 Aligned_cols=94 Identities=19% Similarity=0.225 Sum_probs=80.0
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceee------------
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYE------------ 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~------------ 68 (134)
.++.+|++++++++++.||. +.|++||||| +++||.|.+.++.......+|++|||||||||+|.
T Consensus 212 ~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w 289 (329)
T 2b3h_A 212 VRYRELGNIIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGW 289 (329)
T ss_dssp CBTTHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSC
T ss_pred CcHHHHHHHHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCcCcccccccCCCc
Confidence 36789999999999999996 8999999999 99999998665432122478999999999999995
Q ss_pred -----cCcceEEEeeeEEEecCCccccCCCceeeeeeeccC-C-Cccc
Q psy2561 69 -----DGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL-V-PIQT 109 (134)
Q Consensus 69 -----~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~-~-P~~~ 109 (134)
+|.+|+|+||+|+||++ |+|+||. . |...
T Consensus 290 ~~~~~~G~~g~riEdtvlVTe~------------G~evLT~~~~~k~~ 325 (329)
T 2b3h_A 290 TAVTRDGKRSAQFEHTLLVTDT------------GCEILTRRLDSARP 325 (329)
T ss_dssp CEEETTCCCEEECBEEEEECSS------------SEEETTCCSSCSSC
T ss_pred eeEeeCCeEEEEEeeEEEEcCC------------eeEECCCCCCCCCC
Confidence 46689999999999999 9999996 3 5544
No 26
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=99.87 E-value=2.5e-22 Score=170.06 Aligned_cols=101 Identities=26% Similarity=0.283 Sum_probs=81.5
Q ss_pred CchHHHHHHHHHHHHH----cCC----------------CCCCcceeecCCCCcccCCCCcC---------CCCCCCCCC
Q psy2561 2 SQGHAIDAIARHNLWS----VGL----------------DYLHGTGHGIGSYLNVHEGPISV---------SYLPKATDS 52 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~----~G~----------------~~~~~~GHGIG~~l~vhE~P~~~---------~~~~~~~~~ 52 (134)
.++.+|+.++++++++ .|+ .+.|++||||| +++||.|... ......++.
T Consensus 325 ~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiG--l~vHd~~~~~~~~~~~~~p~~~~~~~~~ 402 (494)
T 2iw2_A 325 VWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLG--IDVHDVGGYPEGVERIDEPGLRSLRTAR 402 (494)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCSCSSCTTCCCCCSTTGGGCSCCC
T ss_pred CcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCC--cccccCCCcccccccccccccccCCCCC
Confidence 3678999999998754 453 26899999999 9999954211 110113567
Q ss_pred cccCCceeeecCceeec--------------------------CcceEEEeeeEEEecCCccccCCCceeeeeeeccCCC
Q psy2561 53 GILADMFISDEPGYYED--------------------------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVP 106 (134)
Q Consensus 53 ~L~~GMV~tiEPgiy~~--------------------------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P 106 (134)
+|+||||||||||+|.+ |.+|+|+||+|+||++ |+|+||.+|
T Consensus 403 ~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~------------G~e~LT~~p 470 (494)
T 2iw2_A 403 HLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDS------------GIELLTCVP 470 (494)
T ss_dssp BCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSS------------SEEECCCCC
T ss_pred EeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeeeEEEEcCC------------cCeECCCCC
Confidence 99999999999999974 6679999999999999 999999999
Q ss_pred ccchhhhhcc
Q psy2561 107 IQTSLLCCNM 116 (134)
Q Consensus 107 ~~~~~i~~~l 116 (134)
+++..|+..|
T Consensus 471 ~~~~~ie~~m 480 (494)
T 2iw2_A 471 RTVEEIEACM 480 (494)
T ss_dssp CSHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 9999998755
No 27
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=99.85 E-value=1.1e-21 Score=167.71 Aligned_cols=93 Identities=26% Similarity=0.308 Sum_probs=75.6
Q ss_pred CchHHHHHHHHHHHH-----------------HcCC---CCCCcceeecCCCCcccCCCCcCCCC-------C-----CC
Q psy2561 2 SQGHAIDAIARHNLW-----------------SVGL---DYLHGTGHGIGSYLNVHEGPISVSYL-------P-----KA 49 (134)
Q Consensus 2 ~~~~~id~~~r~~l~-----------------~~G~---~~~~~~GHGIG~~l~vhE~P~~~~~~-------~-----~~ 49 (134)
.++++|++++++++. +.|+ .+.|++||||| +++||.|.+.+.. + .+
T Consensus 290 v~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~p~l~ 367 (517)
T 3l24_A 290 KLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGHPFLR 367 (517)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC---------------CC
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCccccccccccccccccccccCC
Confidence 367899999998874 4565 48999999999 9999999754321 0 03
Q ss_pred CCCcccCCceeeecCceeec-------------------------CcceEEEeeeEEEecCCccccCCCceeeeeeeccC
Q psy2561 50 TDSGILADMFISDEPGYYED-------------------------GKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL 104 (134)
Q Consensus 50 ~~~~L~~GMV~tiEPgiy~~-------------------------g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~ 104 (134)
++.+|+||||||||||+|++ |.+|+||||+|+||++ |+|+||.
T Consensus 368 ~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~------------G~e~LT~ 435 (517)
T 3l24_A 368 CTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED------------SLENMTR 435 (517)
T ss_dssp TTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEEEHHH
T ss_pred CCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCC------------cCeeCCC
Confidence 56789999999999999983 4569999999999999 9999996
Q ss_pred -CCcc
Q psy2561 105 -VPIQ 108 (134)
Q Consensus 105 -~P~~ 108 (134)
+|.+
T Consensus 436 ~~~~~ 440 (517)
T 3l24_A 436 ELRLR 440 (517)
T ss_dssp HTTCC
T ss_pred ccchh
Confidence 5665
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=99.77 E-value=2.7e-18 Score=142.53 Aligned_cols=110 Identities=13% Similarity=0.070 Sum_probs=87.0
Q ss_pred chHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCC--cCCCCC----CCCCCcccCCceeeecCceee-------
Q psy2561 3 QGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPI--SVSYLP----KATDSGILADMFISDEPGYYE------- 68 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~--~~~~~~----~~~~~~L~~GMV~tiEPgiy~------- 68 (134)
++++|+++++++++++||. +.+++||||| +.+||.|. +.++.. .+++.+|++||||||||+++.
T Consensus 169 ~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~ 246 (401)
T 2q8k_A 169 QNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKD 246 (401)
T ss_dssp BHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEE
T ss_pred cHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEE
Confidence 6789999999999999996 7899999999 99999995 333310 024678999999999999972
Q ss_pred ------------------------------------------------------------------------cCcceEEE
Q psy2561 69 ------------------------------------------------------------------------DGKFGIRI 76 (134)
Q Consensus 69 ------------------------------------------------------------------------~g~~gvri 76 (134)
+|...+++
T Consensus 247 ~~~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~ 326 (401)
T 2q8k_A 247 AGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQF 326 (401)
T ss_dssp CSCCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEE
T ss_pred CCCCceEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEE
Confidence 13345899
Q ss_pred eeeEEEecCCccccCCCceeeeeeeccCCCccchhh--hhccCCHHHHHHHH
Q psy2561 77 ENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLL--CCNMLTADEVSRIE 126 (134)
Q Consensus 77 ed~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i--~~~ll~~~e~~wln 126 (134)
|+||+||++ |+|+||..|++...+ ++++-+++=+++|.
T Consensus 327 EhTvlvt~~------------G~eilT~~~~~~~~~~s~~~~~d~e~~~~l~ 366 (401)
T 2q8k_A 327 KFTVLLMPN------------GPMRITSGPFEPDLYKSEMEVQDAELKALLQ 366 (401)
T ss_dssp EEEEEEETT------------EEEECCCCCCCGGGBCCSCCCCCHHHHHHHH
T ss_pred EEEEEECCC------------CcEEecCCCCCHhhccCCCccCcHHHHHHHh
Confidence 999999999 999999999987666 45554455555654
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.75 E-value=4e-18 Score=136.15 Aligned_cols=75 Identities=12% Similarity=0.065 Sum_probs=62.4
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEee
Q psy2561 2 SQGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIEN 78 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried 78 (134)
.++++|+++++++++++||. +.|++|||||. +++||.|.+.+..+.+.+.+|+|||||||||++| +|.+++|+++
T Consensus 126 ~~~~dI~~a~~~~~~~~G~~~~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~ 201 (295)
T 1xgs_A 126 VEIKELGKAIENEIRKRGFKPIVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVP 201 (295)
T ss_dssp CBTHHHHHHHHHHHHTTTCEECTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEE
T ss_pred CcHHHHHHHHHHHHHHCCCeEECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECC
Confidence 36789999999999999996 89999999983 4899999876553323378999999999999999 7888877643
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.63 E-value=3.8e-16 Score=132.40 Aligned_cols=64 Identities=11% Similarity=0.018 Sum_probs=54.9
Q ss_pred CchHHHHHHHHHHHHHcCCC----------CCCcceeec-CCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceee
Q psy2561 2 SQGHAIDAIARHNLWSVGLD----------YLHGTGHGI-GSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYE 68 (134)
Q Consensus 2 ~~~~~id~~~r~~l~~~G~~----------~~~~~GHGI-G~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~ 68 (134)
.++++|+++++++++++||. ++|++|||| | +.+||.|.+++.. +++..+|++||||||||++|.
T Consensus 295 ~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~-~~~~~~Le~GMVftIEP~i~~ 369 (478)
T 1b6a_A 295 VRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVK-GGEATRMEEGEVYAIETFGST 369 (478)
T ss_dssp CBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSS-SCCCCBCCTTCEEEEEEEEES
T ss_pred CCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceec-CCCCCEeCCCCEEEEeCeeEC
Confidence 36789999999999999973 789999999 8 8999988765543 256789999999999999984
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.51 E-value=7.6e-15 Score=120.47 Aligned_cols=70 Identities=20% Similarity=0.080 Sum_probs=60.9
Q ss_pred chHHHHHHHHHHHHHcCC----------CCCCcceeecCCCC-cccCCCCcCCCCCCCCCCcccCCceeeecCceeecCc
Q psy2561 3 QGHAIDAIARHNLWSVGL----------DYLHGTGHGIGSYL-NVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGK 71 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~----------~~~~~~GHGIG~~l-~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~ 71 (134)
+.++|+++++++++++|| .+.|++||||| + .+||.|.+.+..+ +++.+|++||||||||++| +|.
T Consensus 177 ~~~dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~~GHgIG--~y~iHe~P~I~~~~~-~~~~~Le~GmV~aIEP~i~-~G~ 252 (360)
T 2nw5_A 177 RVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNN-RDTTRIKGDSFYAVETFAT-TGK 252 (360)
T ss_dssp BHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCC-CCCCBCCSSEEEEEEEEEE-SSC
T ss_pred cHHHHHHHHHHHHHHcCCccccccccccccCCeeEeeec--CceeccCCEeccccC-CCCcEEeCCcEEEEeceEE-CCc
Confidence 578999999999999986 26799999999 9 9999998754432 6788999999999999999 899
Q ss_pred ceEEE
Q psy2561 72 FGIRI 76 (134)
Q Consensus 72 ~gvri 76 (134)
+++|-
T Consensus 253 G~Vr~ 257 (360)
T 2nw5_A 253 GSIDD 257 (360)
T ss_dssp SCCEE
T ss_pred ceEEe
Confidence 99984
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.45 E-value=1.2e-13 Score=113.08 Aligned_cols=62 Identities=18% Similarity=0.082 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHHHcCCC----------CCCcceeecCCCC-cccCCCCcCCCCCCCCCCcccCCceeeecCcee
Q psy2561 3 QGHAIDAIARHNLWSVGLD----------YLHGTGHGIGSYL-NVHEGPISVSYLPKATDSGILADMFISDEPGYY 67 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~----------~~~~~GHGIG~~l-~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy 67 (134)
+..++..++++++.+.|+. +++++||||| . ..||.|.+.++.. +.+.+|++||||||||++.
T Consensus 175 ~~~dig~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG--~~~~he~~~ip~~~~-~~~~~le~GmV~tIEP~is 247 (358)
T 3fm3_A 175 RVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNN-RDTTRIKGDSFYAVETFAT 247 (358)
T ss_dssp BHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCC-CCCCBCCSSEEEEEEEEEE
T ss_pred ccccccHHHHHHHhhccceeccccccccccccccccccC--CccccCCCccCccCC-CCCcEEeeeeeEEeeeeee
Confidence 4678899999999998863 4789999999 6 4688887766543 5677899999999999874
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=87.35 E-value=1.1 Score=39.08 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=26.2
Q ss_pred chHHHHHHHHHHHHHcCCC-CCCcceeecCCCC
Q psy2561 3 QGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYL 34 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l 34 (134)
+..+|-.++..+.+.+|+. +..-+||+|+.|+
T Consensus 240 t~~~It~~IekvaksY~ck~Vegl~sH~i~r~~ 272 (614)
T 4b6a_t 240 TGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFL 272 (614)
T ss_dssp BHHHHHHHHHHHHHTTTCEECTTCEEEEEBTTB
T ss_pred chHHHHHHHHHHHhcCCcEEeccccccccccee
Confidence 4567888888899999996 7889999999553
No 34
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=70.16 E-value=11 Score=30.01 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=47.3
Q ss_pred chHHHHHHHHHHHHHcCCC-CCCcceeecCCCCcccCCCC--cCCCCCCCCCCcccCCceeeecCceeecCcceEEEeee
Q psy2561 3 QGHAIDAIARHNLWSVGLD-YLHGTGHGIGSYLNVHEGPI--SVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENI 79 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~-~~~~~GHGIG~~l~vhE~P~--~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~ 79 (134)
+-.+|++.+.+.+++.|-. -..+.|..+. +++.+.-. +.+.. .++.+|++|.++.|.-|+..+|.. .-...|
T Consensus 71 t~~el~~~~e~~i~~~~~~~~~~g~~FP~c--iSvN~~v~Hg~P~~~--~~~~~L~~GDiV~ID~G~~~dGY~-sD~arT 145 (358)
T 3fm3_A 71 TLLEIVRSIEDSTRTLLKGERNNGIGFPAG--MSMNSCAAHYTVNPG--EQDIVLKEDDVLKIDFGTHSDGRI-MDSAFT 145 (358)
T ss_dssp BHHHHHHHHHHHHHHHTTTSGGGGEEEEEE--EEETTEEECCCCCTT--CCCCBCCTTCEEEEEEEEEETTEE-EEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCcccCCCCCcE--EeeCCEEEecCCCCC--CCCeEecCCCEEEEEeeEEECCEE-EEEEEe
Confidence 4468888888888887763 2222344444 55533211 01111 256889999999999999986643 335556
Q ss_pred EEEec
Q psy2561 80 VQVIP 84 (134)
Q Consensus 80 v~Vt~ 84 (134)
+.|.+
T Consensus 146 ~~vg~ 150 (358)
T 3fm3_A 146 VAFKE 150 (358)
T ss_dssp EECCG
T ss_pred ccccc
Confidence 66654
No 35
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=67.84 E-value=6.2 Score=31.75 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=30.0
Q ss_pred ccCCceeeecCceeecCcceEEEeeeEEEecCCccccCCCceeeeeeeccC
Q psy2561 54 ILADMFISDEPGYYEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITL 104 (134)
Q Consensus 54 L~~GMV~tiEPgiy~~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~ 104 (134)
++-|.|-.-.|-+-.+|..-.+.|+||+|+++ |.+++|.
T Consensus 318 ~~~g~~~~ypvl~e~~g~~vaqfe~Tv~~~~~------------g~~~~t~ 356 (360)
T 2nw5_A 318 TMMGLLTPYPPLNDIDGCKVAQFEHTVYLSEH------------GKEVLTR 356 (360)
T ss_dssp HHTTSEEECCCEECSTTCCEEEEEEEEEEETT------------EEEECSC
T ss_pred HHCCCcccCCccEecCCCEEEEEEEEEEECCC------------CcEEecC
Confidence 44555555555555567778899999999999 9999996
No 36
>2e9x_A DNA replication complex GINS protein PSF1; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.1 PDB: 2eho_B*
Probab=63.79 E-value=2.9 Score=29.47 Aligned_cols=19 Identities=16% Similarity=0.024 Sum_probs=16.9
Q ss_pred hccCCHHHHHHHHhhhhhc
Q psy2561 114 CNMLTADEVSRIEYTLFIL 132 (134)
Q Consensus 114 ~~ll~~~e~~wln~y~~~~ 132 (134)
++.||++|.+|+++|-+.|
T Consensus 103 ~~~LS~~E~~f~~~Y~~lL 121 (149)
T 2e9x_A 103 RFHMAAEEMEWFNNYKRSL 121 (149)
T ss_dssp HHTSCHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHH
Confidence 5789999999999998765
No 37
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=51.94 E-value=15 Score=28.28 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=27.2
Q ss_pred CCCCcccCCceeeecCceee----cCc-ceEEEeeeEEEecCC
Q psy2561 49 ATDSGILADMFISDEPGYYE----DGK-FGIRIENIVQVIPAE 86 (134)
Q Consensus 49 ~~~~~L~~GMV~tiEPgiy~----~g~-~gvried~v~Vt~~~ 86 (134)
+...+|.||.-+||.|++|- .+. +.+-+.+.-.+.+|.
T Consensus 171 G~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~NDD~ 213 (246)
T 3kmh_A 171 GSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDD 213 (246)
T ss_dssp TCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEECCCTT
T ss_pred CCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEcccCcCCC
Confidence 44558999999999999985 122 237777777777763
No 38
>2q9q_C DNA replication complex GINS protein PSF1; elongated spindle, helix bundle, replication; HET: DNA; 2.36A {Homo sapiens}
Probab=50.97 E-value=6.7 Score=28.78 Aligned_cols=19 Identities=16% Similarity=0.024 Sum_probs=16.9
Q ss_pred hccCCHHHHHHHHhhhhhc
Q psy2561 114 CNMLTADEVSRIEYTLFIL 132 (134)
Q Consensus 114 ~~ll~~~e~~wln~y~~~~ 132 (134)
++.||++|.+|+++|.+.|
T Consensus 103 ~~~LS~~E~~y~~~y~~ll 121 (196)
T 2q9q_C 103 RFHMAAEEMEWFNNYKRSL 121 (196)
T ss_dssp HTTSCHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHH
Confidence 5789999999999998865
No 39
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=42.88 E-value=96 Score=24.09 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeE
Q psy2561 3 QGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIV 80 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v 80 (134)
+-.+|++++.+.+.++|.. ...+.|..-- ...-....+.+.. .++.+|++|.++.+.-+.+..| +..-+..|+
T Consensus 95 te~el~~~~~~~~~~~g~~~~~~~~~~fp~i--v~~g~n~~~~H~~--~~~~~l~~GD~v~iD~g~~~~G-Y~sD~tRT~ 169 (337)
T 4fuk_A 95 TTDELDRIVHEATVERNMYPSPLNYYGFPKS--VCTSVNEVICHGI--PDSRELEEGDILNIDVSSYLNG-FHGDLNETV 169 (337)
T ss_dssp BHHHHHHHHHHHHHHTTCEETTTTGGGCCSS--SEEEETTEEECCC--CCSCBCCTTCEEEEEEEEEETT-EEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCccCCCCCCcCce--eeccccccccCCC--CCCccccCCCEEEEecceeECC-EEEeeeeeE
Confidence 3467888888888888863 2222222111 1111111111221 3578899999999999998754 445566777
Q ss_pred EEec
Q psy2561 81 QVIP 84 (134)
Q Consensus 81 ~Vt~ 84 (134)
.|.+
T Consensus 170 ~vG~ 173 (337)
T 4fuk_A 170 FIGR 173 (337)
T ss_dssp ESSS
T ss_pred EeCC
Confidence 7754
No 40
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=42.51 E-value=18 Score=26.26 Aligned_cols=32 Identities=9% Similarity=-0.071 Sum_probs=22.5
Q ss_pred CCCcccCCceeeecCceeecCcceEEE-eeeEEEecC
Q psy2561 50 TDSGILADMFISDEPGYYEDGKFGIRI-ENIVQVIPA 85 (134)
Q Consensus 50 ~~~~L~~GMV~tiEPgiy~~g~~gvri-ed~v~Vt~~ 85 (134)
...+|+||..++|.|+.+- .+.. ++.++|.|-
T Consensus 119 ~~i~L~pGesvtIppg~~H----~f~ageegvli~Ev 151 (175)
T 2y0o_A 119 HEIELEPGGQYTIPPNTKH----WFQAGEEGAVVTEM 151 (175)
T ss_dssp EEEEECTTCEEEECTTCCE----EEEEEEEEEEEEEE
T ss_pred cEEEECCCCEEEECCCCcE----EEEeCCCCEEEEEE
Confidence 3358999999999999875 2222 555777664
No 41
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=38.83 E-value=1.3e+02 Score=23.49 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeE
Q psy2561 3 QGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIV 80 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v 80 (134)
+-.+|++++.+.+.+.|.. ...+.+..--.+.+.++ .+.++. .++.+|++|.++.|.-+.+.. .+..-+..|+
T Consensus 107 te~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~--~~~H~~--p~~~~L~~GDiv~iD~G~~~~-GY~sD~tRT~ 181 (329)
T 2b3h_A 107 TTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNE--VICHGI--PDRRPLQEGDIVNVDITLYRN-GYHGDLNETF 181 (329)
T ss_dssp BHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT--EEECCC--CCSCBCCTTCEEEEEEEEEET-TEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCC--CcCCCC--CCCcCCCCCCEEEEEeeEEEC-CEEEeeEEEE
Confidence 3468899999999888863 11111221110011221 111221 246789999999999999864 4556778888
Q ss_pred EEec
Q psy2561 81 QVIP 84 (134)
Q Consensus 81 ~Vt~ 84 (134)
.|.+
T Consensus 182 ~vG~ 185 (329)
T 2b3h_A 182 FVGE 185 (329)
T ss_dssp ECSS
T ss_pred EeCC
Confidence 8864
No 42
>2e9x_D GINS complex subunit 4; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.4 d.344.1.3 PDB: 2q9q_B* 2eho_A*
Probab=38.67 E-value=13 Score=27.71 Aligned_cols=18 Identities=11% Similarity=0.047 Sum_probs=16.2
Q ss_pred ccCCHHHHHHHHhhhhhc
Q psy2561 115 NMLTADEVSRIEYTLFIL 132 (134)
Q Consensus 115 ~ll~~~e~~wln~y~~~~ 132 (134)
+.||++|.+|+++|.+.+
T Consensus 120 ~~LS~~E~~f~~~y~~ll 137 (223)
T 2e9x_D 120 SSLSPEELAFAREFMANT 137 (223)
T ss_dssp CSSCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHH
Confidence 789999999999998764
No 43
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=37.20 E-value=1.2e+02 Score=22.25 Aligned_cols=76 Identities=11% Similarity=-0.084 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeEE
Q psy2561 4 GHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQ 81 (134)
Q Consensus 4 ~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v~ 81 (134)
-.+|++.++..+.+.|-. +....|..--....... ...++. .++.+|++|.++.+.-+....| +-.-+..|+.
T Consensus 37 E~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~--~~~H~~--~~~~~l~~Gdlv~iD~g~~~~G-Y~sD~tRT~~ 111 (264)
T 3tb5_A 37 SWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSIND--EICHGF--PRKKVLKDGDLIKVDMCVDLKG-AISDSCWSYV 111 (264)
T ss_dssp HHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETT--EEECCC--CCSCBCCTTCEEEEEEEEEETT-EEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcc--cccCCC--CCCccccCCCEEEEeccceecc-eeeecccccc
Confidence 457888888888888763 11111111110011111 111221 3567899999999999987644 5566777888
Q ss_pred Eec
Q psy2561 82 VIP 84 (134)
Q Consensus 82 Vt~ 84 (134)
|.+
T Consensus 112 vG~ 114 (264)
T 3tb5_A 112 VGE 114 (264)
T ss_dssp CSS
T ss_pred cCC
Confidence 744
No 44
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=37.02 E-value=8.4 Score=26.47 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=25.5
Q ss_pred eeeeccCCCccchhhhhccCCHHH-HHHHHhhhh
Q psy2561 98 TFKTITLVPIQTSLLCCNMLTADE-VSRIEYTLF 130 (134)
Q Consensus 98 G~e~LT~~P~~~~~i~~~ll~~~e-~~wln~y~~ 130 (134)
+.+.|| |.|.+-|.+..|++.+ +.|+-+|+.
T Consensus 31 a~~~Lt--P~DWkslar~~L~pgq~llW~se~~e 62 (116)
T 4ard_A 31 ADNWLT--PTDWNTLVRAVLSGGDHLLWKSEFFE 62 (116)
T ss_pred HHhccC--hHhHHHHHHHHcCchhHHHHHHHHHH
Confidence 556666 9999999999999855 899999864
No 45
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=33.29 E-value=1.4e+02 Score=21.90 Aligned_cols=75 Identities=7% Similarity=-0.017 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeEE
Q psy2561 4 GHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIVQ 81 (134)
Q Consensus 4 ~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v~ 81 (134)
-.+|++.+.+.+.+.|.. +....|+.--.....+ ..+.++. .++.+|++|.++.+.-+... +.+-.-+..|+.
T Consensus 41 E~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n--~~~~H~~--p~~~~l~~Gd~v~iD~G~~~-~GY~sD~tRT~~ 115 (262)
T 3mx6_A 41 TNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSIN--HVVCHGI--PNDKPLKNGDIVNIDVTVIL-DGWYGDTSRMYY 115 (262)
T ss_dssp HHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEET--TEEECCC--CCSCBCCTTCEEEEEEEEEE-TTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcccccccCCCCcceEeccc--ccccCCC--CCCcccCCCCEEEEEeeEEE-CCEEEEEEEEEE
Confidence 457888888888888763 2111222211001121 1112222 23568999999999998875 445566788888
Q ss_pred Ee
Q psy2561 82 VI 83 (134)
Q Consensus 82 Vt 83 (134)
|.
T Consensus 116 vG 117 (262)
T 3mx6_A 116 VG 117 (262)
T ss_dssp CS
T ss_pred cC
Confidence 85
No 46
>1byy_A Protein (sodium channel alpha-subunit); membrane protein; NMR {Rattus norvegicus} SCOP: j.12.1.1
Probab=33.16 E-value=22 Score=20.66 Aligned_cols=16 Identities=6% Similarity=0.059 Sum_probs=12.7
Q ss_pred cCCHHHHHHHHhhhhh
Q psy2561 116 MLTADEVSRIEYTLFI 131 (134)
Q Consensus 116 ll~~~e~~wln~y~~~ 131 (134)
+||+++++|+|.=-++
T Consensus 16 fmT~~Qkk~y~amkkl 31 (53)
T 1byy_A 16 FMTEEQKKYYNAMKKL 31 (53)
T ss_dssp CCCHHHHHHHHHHHTS
T ss_pred ccCHHHHHHHHHHHHH
Confidence 6799999999974443
No 47
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=33.10 E-value=1.5e+02 Score=23.73 Aligned_cols=74 Identities=9% Similarity=-0.066 Sum_probs=46.0
Q ss_pred chHHHHHHHHHHHHHcCCC--CCCcceee--cCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEee
Q psy2561 3 QGHAIDAIARHNLWSVGLD--YLHGTGHG--IGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIEN 78 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~--~~~~~GHG--IG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried 78 (134)
+-.+|++++.+.+.+.|.. ...+.+.. ++ .+.++. +.++. .++.+|++|.++.|.-+.+.. .+..-+..
T Consensus 135 TE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~--i~H~~--p~~r~L~~GDiV~iD~G~~~~-GY~sDitR 207 (368)
T 3s6b_A 135 TTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEI--VCHGI--PDYRPLKSGDIINIDISVFYK-GVHSDLNE 207 (368)
T ss_dssp BHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTE--EECCC--CCSCBCCTTCEEEEEEEEEET-TEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCccc--cccCC--CCCccccCCCEEEEEEeEEEC-cEEEEEEE
Confidence 3468888998998888863 11122221 11 222221 12221 246789999999999998864 45567788
Q ss_pred eEEEe
Q psy2561 79 IVQVI 83 (134)
Q Consensus 79 ~v~Vt 83 (134)
|+.|.
T Consensus 208 T~~vG 212 (368)
T 3s6b_A 208 TYFVG 212 (368)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 88886
No 48
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=28.76 E-value=1.8e+02 Score=21.74 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHHHHcCCC--CCCcceeecCCCCcccCCCCcCCCCCCCCCCcccCCceeeecCceeecCcceEEEeeeE
Q psy2561 3 QGHAIDAIARHNLWSVGLD--YLHGTGHGIGSYLNVHEGPISVSYLPKATDSGILADMFISDEPGYYEDGKFGIRIENIV 80 (134)
Q Consensus 3 ~~~~id~~~r~~l~~~G~~--~~~~~GHGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~tiEPgiy~~g~~gvried~v 80 (134)
+-.+|++.+.+.+.+.|.. +..+.|+.--.+...+. .+.++. .++.+|++|.++.+.-+... +.+..-+..|+
T Consensus 73 tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~--~~~H~~--p~~~~l~~Gd~v~iD~G~~~-~GY~sD~tRT~ 147 (285)
T 3pka_A 73 TTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNE--VICHGI--PDSTVITDGDIVNIDVTAYI-GGVHGDTNATF 147 (285)
T ss_dssp BHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT--EEECCC--CCSCBCCTTCEEEEEEEEEE-TTEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCCccccccccCCCCceEecccc--eeecCC--CCCcccCCCCEEEEEEEEEE-CCEEEEEEEEE
Confidence 3467888888888888863 21112222110011221 112222 14678999999999998875 44556678888
Q ss_pred EEec
Q psy2561 81 QVIP 84 (134)
Q Consensus 81 ~Vt~ 84 (134)
.|.+
T Consensus 148 ~vG~ 151 (285)
T 3pka_A 148 PAGD 151 (285)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 8853
No 49
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=26.11 E-value=47 Score=20.77 Aligned_cols=11 Identities=9% Similarity=0.024 Sum_probs=7.7
Q ss_pred cccCCceeeec
Q psy2561 53 GILADMFISDE 63 (134)
Q Consensus 53 ~L~~GMV~tiE 63 (134)
.|++|.|+.++
T Consensus 35 ~L~~GdVi~Ld 45 (84)
T 1o9y_A 35 RLDAGTILEVT 45 (84)
T ss_dssp TCCTTCEEEEC
T ss_pred cCCCCCEEEeC
Confidence 36777777775
No 50
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=25.07 E-value=1.7e+02 Score=25.45 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=29.5
Q ss_pred CCcccCCceeeecCceeecCcceEEEeeeEEEecC
Q psy2561 51 DSGILADMFISDEPGYYEDGKFGIRIENIVQVIPA 85 (134)
Q Consensus 51 ~~~L~~GMV~tiEPgiy~~g~~gvried~v~Vt~~ 85 (134)
+.+|++|.|+.|.=|+.++| +.+...+|++|.+.
T Consensus 151 ~~vLk~GDVVKIDLGvHIDG-yiadvA~Tvvvg~~ 184 (614)
T 4b6a_t 151 TGTLRPGDLVKITLGVHIDG-YTSEVSHTMVIYPV 184 (614)
T ss_dssp CCBCCTTCEEEEEEEEEETT-EEEEEEEEEECCCC
T ss_pred cccccCCCEEEEEeeEEECC-eEEEEEEEEEECCc
Confidence 56899999999999999955 57888999999764
No 51
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=23.46 E-value=56 Score=21.14 Aligned_cols=11 Identities=9% Similarity=0.057 Sum_probs=7.9
Q ss_pred cccCCceeeec
Q psy2561 53 GILADMFISDE 63 (134)
Q Consensus 53 ~L~~GMV~tiE 63 (134)
.|++|.|+.++
T Consensus 39 ~L~~GdVI~Ld 49 (96)
T 3uep_A 39 SLEPGSLIDLT 49 (96)
T ss_dssp HCCTTCEEEEE
T ss_pred cCCCCCEEEeC
Confidence 47778887774
No 52
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=22.22 E-value=1.5e+02 Score=18.30 Aligned_cols=52 Identities=6% Similarity=-0.019 Sum_probs=31.8
Q ss_pred eecCcceEEEeeeEEEecCCccccCCCceeeeeeeccCCCccchhhhhccCCHHHHHHHHhhhh
Q psy2561 67 YEDGKFGIRIENIVQVIPAETKYSRKNKTFLTFKTITLVPIQTSLLCCNMLTADEVSRIEYTLF 130 (134)
Q Consensus 67 y~~g~~gvried~v~Vt~~~~~~~~~~~~~~G~e~LT~~P~~~~~i~~~ll~~~e~~wln~y~~ 130 (134)
|.+..+.+++|-.++--.+ |--.|-..--...-+-.+=||.++++|+.+-.+
T Consensus 8 WtDrtG~F~VeA~flg~~d------------gki~LhK~nGv~I~VP~~klS~~D~~yve~~~g 59 (68)
T 2hbp_A 8 WVDRSGTFKVDAEFIGCAK------------GKIHLHKANGVKIAVAADKLSNEDLAYVEKITG 59 (68)
T ss_dssp EEBSSSCCEEEEEEEEEET------------TEEEEECTTSCEEEEETTSBCHHHHHHHHHHHS
T ss_pred EEcCCCCeEEEEEEEEEeC------------CEEEEEecCCcEEEeEhHHcCHHHHHHHHHHhc
Confidence 5555667778777765556 444444433333333455699999999976543
No 53
>3ge3_C Toluene-4-monooxygenase system protein B; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: d.15.12.0 PDB: 3dhh_C* 3dhg_C* 3dhi_C 3ge8_C 3i5j_C 3i63_C 3q14_C 3q2a_C* 3q3m_C* 3q3n_C* 3q3o_C* 3rmk_C* 3ri7_C*
Probab=21.33 E-value=22 Score=23.01 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=21.9
Q ss_pred eecCCCCcccCCCCcCCCCCCCCCCcccCCceee
Q psy2561 28 HGIGSYLNVHEGPISVSYLPKATDSGILADMFIS 61 (134)
Q Consensus 28 HGIG~~l~vhE~P~~~~~~~~~~~~~L~~GMV~t 61 (134)
|.|| +.++..|-.+.-++.++...|..+|.++
T Consensus 37 h~VG--rrv~p~pg~lrVr~~G~~~~~Pr~mtVa 68 (84)
T 3ge3_C 37 HCVN--RRVAPREGVMRVRKHRSTELFPRDMTIA 68 (84)
T ss_dssp TTBT--TTBCCCSSCEEEEETTCSCBCCTTCBHH
T ss_pred hhcc--eeeCCCCCcEEEEECCCcccCCCCCEee
Confidence 8999 9998877533333335666687788765
No 54
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=20.05 E-value=72 Score=20.42 Aligned_cols=11 Identities=9% Similarity=0.193 Sum_probs=8.0
Q ss_pred cccCCceeeec
Q psy2561 53 GILADMFISDE 63 (134)
Q Consensus 53 ~L~~GMV~tiE 63 (134)
.|++|.|+.+.
T Consensus 39 ~L~~GdVI~Ld 49 (96)
T 1o6a_A 39 EMIHGSIIELD 49 (96)
T ss_dssp HCCTTCEEEEE
T ss_pred CCCCCCEEEeC
Confidence 47778887775
Done!