Query psy257
Match_columns 157
No_of_seqs 148 out of 1039
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 19:32:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy257.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/257hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a3xa2 c.1.12.1 (A:1-87,A:189 100.0 2.6E-36 1.9E-40 250.4 5.6 84 1-84 182-265 (265)
2 d1e0ta2 c.1.12.1 (A:1-69,A:168 100.0 1.5E-35 1.1E-39 243.5 4.8 79 1-79 165-243 (246)
3 d1pkla2 c.1.12.1 (A:1-87,A:187 100.0 3.7E-35 2.7E-39 242.6 6.2 77 1-77 182-258 (258)
4 d2g50a2 c.1.12.1 (A:12-115,A:2 100.0 3.4E-34 2.5E-38 239.1 7.5 84 1-84 199-282 (282)
5 d1pkla3 c.49.1.1 (A:358-498) P 99.5 1E-15 7.3E-20 114.5 1.0 72 80-151 3-87 (141)
6 d1a3xa3 c.49.1.1 (A:367-500) P 99.5 1.8E-15 1.3E-19 112.0 0.4 68 85-152 1-81 (134)
7 d2vgba3 c.49.1.1 (A:440-573) P 99.5 3.9E-15 2.8E-19 110.2 0.9 69 85-153 1-82 (134)
8 d1e0ta3 c.49.1.1 (A:354-470) P 99.4 5.5E-15 4E-19 107.2 -1.2 51 106-156 20-74 (117)
9 d2g50a3 c.49.1.1 (A:396-530) P 99.3 6.4E-14 4.7E-18 103.9 0.6 56 97-152 14-81 (135)
10 d1vrda1 c.1.5.1 (A:1-85,A:213- 62.0 2.7 0.00019 33.3 3.3 33 5-49 197-229 (330)
11 d1wv2a_ c.1.31.1 (A:) Thiazole 61.5 4.8 0.00035 30.9 4.7 40 33-72 191-230 (243)
12 d1zfja1 c.1.5.1 (A:2-94,A:221- 60.5 3.1 0.00022 33.5 3.5 34 5-50 206-239 (365)
13 d1jr1a1 c.1.5.1 (A:17-112,A:23 58.6 3.3 0.00024 33.4 3.4 34 5-50 218-251 (378)
14 d2cu0a1 c.1.5.1 (A:3-96,A:207- 57.5 3.3 0.00024 33.2 3.2 35 4-50 211-245 (368)
15 d1eepa_ c.1.5.1 (A:) Inosine m 54.7 3.4 0.00025 33.3 2.8 34 5-50 250-283 (388)
16 d1yxya1 c.1.2.5 (A:4-233) Puta 49.4 5.2 0.00038 28.3 2.9 35 3-49 177-211 (230)
17 d1xi3a_ c.1.3.1 (A:) Thiamin p 47.6 20 0.0014 25.4 6.0 40 35-74 166-205 (206)
18 d1zcca1 c.1.18.3 (A:1-240) Gly 46.6 20 0.0015 25.3 5.9 43 2-64 187-230 (240)
19 d1ydya1 c.1.18.3 (A:29-356) Gl 46.6 9.1 0.00066 27.9 4.0 52 2-66 272-327 (328)
20 d1y0ea_ c.1.2.5 (A:) Putative 45.1 6.9 0.0005 27.4 2.9 39 4-56 170-208 (222)
21 d1pvna1 c.1.5.1 (A:2-99,A:231- 39.9 6.2 0.00045 31.3 2.1 17 33-49 232-248 (362)
22 d1xm3a_ c.1.31.1 (A:) Thiazole 38.7 19 0.0014 27.6 4.7 56 5-72 173-228 (251)
23 d1khda1 a.46.2.1 (A:12-80) Ant 38.0 13 0.00092 22.2 3.0 28 17-44 4-31 (69)
24 d2nqra3 c.57.1.2 (A:178-326) M 34.7 13 0.00095 25.6 3.0 49 3-59 34-82 (149)
25 d1p0ka_ c.1.4.1 (A:) Isopenten 34.4 9.2 0.00067 28.9 2.2 18 33-50 243-260 (329)
26 d1o5ka_ c.1.10.1 (A:) Dihydrod 31.8 68 0.0049 23.2 7.0 59 7-74 68-127 (295)
27 d1dxea_ c.1.12.5 (A:) 2-dehydr 31.7 12 0.00087 28.1 2.5 37 2-50 59-95 (253)
28 d2v3ka1 c.116.1.6 (A:25-251) E 31.7 9.1 0.00066 28.7 1.7 26 51-76 199-224 (227)
29 d1ep3a_ c.1.4.1 (A:) Dihydroor 31.3 20 0.0014 26.5 3.7 32 7-50 239-270 (311)
30 d1vcfa1 c.1.4.1 (A:23-332) Iso 29.1 13 0.00092 27.4 2.2 18 33-50 246-263 (310)
31 d2iw1a1 c.87.1.8 (A:2-371) Lip 27.8 37 0.0027 23.8 4.6 49 4-72 288-336 (370)
32 d2hoea1 a.4.5.63 (A:10-71) N-a 24.7 14 0.001 21.7 1.4 23 16-39 2-24 (62)
33 d1ojxa_ c.1.10.1 (A:) Archaeal 24.3 50 0.0036 24.1 4.9 50 25-76 85-135 (251)
34 d1hg3a_ c.1.1.1 (A:) Triosepho 23.6 29 0.0021 24.8 3.3 35 33-67 187-221 (224)
35 d1x2na1 a.4.1.1 (A:6-67) Homeo 22.7 25 0.0018 20.6 2.3 25 16-40 14-42 (62)
36 d1o17a1 a.46.2.1 (A:1-70) Anth 22.0 38 0.0028 19.8 3.1 46 17-74 5-50 (70)
37 d1wu2a3 c.57.1.2 (A:181-324) M 21.8 21 0.0015 24.2 2.1 28 31-58 58-85 (144)
38 d1vhna_ c.1.4.1 (A:) Putative 21.6 26 0.0019 26.6 2.7 37 9-59 179-216 (305)
39 d1vm6a3 c.2.1.3 (A:1-96,A:183- 21.1 19 0.0014 24.1 1.6 16 2-17 58-73 (128)
40 d1q6za1 c.31.1.3 (A:182-341) B 21.0 21 0.0016 23.8 1.9 50 2-51 40-93 (160)
41 d1wb1a4 c.37.1.8 (A:1-179) Elo 20.8 69 0.005 21.2 4.8 49 2-56 104-161 (179)
42 d1uz5a3 c.57.1.2 (A:181-328) M 20.6 25 0.0018 23.8 2.3 48 3-58 34-81 (148)
43 d1r30a_ c.1.28.1 (A:) Biotin s 20.5 39 0.0028 24.6 3.5 27 39-66 273-302 (312)
44 d1h72c2 d.58.26.1 (C:168-300) 20.4 27 0.002 23.4 2.4 29 20-51 65-93 (133)
45 d1znna1 c.1.2.6 (A:18-271) Pyr 20.3 56 0.0041 24.8 4.4 32 33-64 201-232 (254)
No 1
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.6e-36 Score=250.41 Aligned_cols=84 Identities=64% Similarity=0.899 Sum_probs=81.7
Q ss_pred ChhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHHHhhhHH
Q psy257 1 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHT 80 (157)
Q Consensus 1 ii~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e~~~~~~ 80 (157)
||++|+++|||||+||||||||++||+|||||++||+|||+||+||||||+|||.|+||+++|++|++||+++|+.++|.
T Consensus 182 Ii~~~~~~gkpvivATq~LeSM~~~~~PTRAEv~Dvanav~dG~D~vmLs~ETA~G~~Pv~~V~~~~~I~~~~E~~~~~~ 261 (265)
T d1a3xa2 182 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 261 (265)
T ss_dssp HHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEECCSHHHHSCSCHHHHHHHHHHHHHHTTSSSCHH
T ss_pred HHHHHHHcCCcEEehhhhhhhhccCCCCcHHHHHHHHHHHHhCCCEEEEccccccCCCHHHHHHHHHHHHHHHHhccchh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q psy257 81 KLLT 84 (157)
Q Consensus 81 ~~~~ 84 (157)
..|+
T Consensus 262 ~~~~ 265 (265)
T d1a3xa2 262 PNYD 265 (265)
T ss_dssp HHHH
T ss_pred hccC
Confidence 8774
No 2
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.5e-35 Score=243.54 Aligned_cols=79 Identities=56% Similarity=0.848 Sum_probs=61.3
Q ss_pred ChhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHHHhhhH
Q psy257 1 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 79 (157)
Q Consensus 1 ii~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e~~~~~ 79 (157)
||++|+++|||||+||||||||++||+|||||++||+|||+||+||||||||||.|+||+++|++|++||+++|+.+.+
T Consensus 165 ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vmLs~ETa~G~~P~~~v~~l~~i~~~~E~~~~~ 243 (246)
T d1e0ta2 165 MIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNS 243 (246)
T ss_dssp HHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEEEccccccCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999987643
No 3
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=100.00 E-value=3.7e-35 Score=242.58 Aligned_cols=77 Identities=70% Similarity=1.086 Sum_probs=75.0
Q ss_pred ChhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHHHhh
Q psy257 1 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAI 77 (157)
Q Consensus 1 ii~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e~~~ 77 (157)
||++|+++|||||+||||||||+++|+|||||++||+|||+||+||||||+|||.|+||+++|++|++||+++|+.+
T Consensus 182 Ii~~~~~~~kpvivATq~LeSM~~~~~PTRAEv~Dvanav~dG~D~imLs~ETa~G~~P~~~V~~l~~i~~~~E~~~ 258 (258)
T d1pkla2 182 LISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSAL 258 (258)
T ss_dssp HHHHHHHHTCCEEECSSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCEEEEeceeHhhccCCCCCHHHHHHHHHHHHhCCCEEEEccccccCCCHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999863
No 4
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00 E-value=3.4e-34 Score=239.12 Aligned_cols=84 Identities=75% Similarity=1.149 Sum_probs=81.9
Q ss_pred ChhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHHHhhhHH
Q psy257 1 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHT 80 (157)
Q Consensus 1 ii~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e~~~~~~ 80 (157)
||++|+.+|||||+||||||||+++|.|||||++||+|||+||+||||||+|||.|+||+++|++|++||+++|+.++++
T Consensus 199 Ii~~~~~~~kpvivAt~~leSMi~~~~pTRaEv~Dianav~~G~D~imLs~ETa~G~~p~~~V~~l~~i~~~~E~~~~~~ 278 (282)
T d2g50a2 199 IIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHR 278 (282)
T ss_dssp HHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHhcCCcEEEecccccccccCCCCCHHHHHHHHHHHHhCCCEEEECcccccCCCHHHHHHHHHHHHHHHHhchhhH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy257 81 KLLT 84 (157)
Q Consensus 81 ~~~~ 84 (157)
.+|+
T Consensus 279 ~~~~ 282 (282)
T d2g50a2 279 KLFE 282 (282)
T ss_dssp HHHH
T ss_pred hhcC
Confidence 8874
No 5
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=99.50 E-value=1e-15 Score=114.49 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=63.6
Q ss_pred HHHHHHHhhhccCCCCC-Cchhhhhhh--------hhhhhccccccceeeeeecCCC----CCCCChhhhhhccccceee
Q psy257 80 TKLLTELKSMVSITKQY-ETIPTCLSY--------MSGWRTLNRETSVLLWHYRIGI----RTAKTSPAWLGGGYKGFIM 146 (157)
Q Consensus 80 ~~~~~~l~~~~~~~~~~-e~i~~~~a~--------a~i~~T~sg~~A~LLskyRP~~----~T~~~~t~r~l~l~~Gv~p 146 (157)
..+|+++.+..+.|.++ |+|+.+++. +++++|.+|++|++||||||.+ +|++++++|+|+|+|||+|
T Consensus 3 ~~~f~~i~~~~~~p~s~~eaia~sAv~~A~~l~akaIvv~T~sG~tar~iSk~RP~~pI~a~t~~~~~~r~l~l~~GV~p 82 (141)
T d1pkla3 3 YVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVES 82 (141)
T ss_dssp HHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEE
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHhhcCCCCeeeecCCHHHHHHhcccCCcEE
Confidence 35688999999888887 778777776 3689999999999999999999 5999999999999999999
Q ss_pred eeecC
Q psy257 147 LQKKS 151 (157)
Q Consensus 147 l~~~~ 151 (157)
++++.
T Consensus 83 ~~~~~ 87 (141)
T d1pkla3 83 VFFDA 87 (141)
T ss_dssp EECCH
T ss_pred EEecc
Confidence 99864
No 6
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=1.8e-15 Score=111.95 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=58.1
Q ss_pred HHhhhccCCCCC-Cchhhhhhh--------hhhhhccccccceeeeeecCCC----CCCCChhhhhhccccceeeeeecC
Q psy257 85 ELKSMVSITKQY-ETIPTCLSY--------MSGWRTLNRETSVLLWHYRIGI----RTAKTSPAWLGGGYKGFIMLQKKS 151 (157)
Q Consensus 85 ~l~~~~~~~~~~-e~i~~~~a~--------a~i~~T~sg~~A~LLskyRP~~----~T~~~~t~r~l~l~~Gv~pl~~~~ 151 (157)
++++..+.+.++ |+|+.+++. +++++|.+|++|+++|||||.+ +|++++++|||+|+|||+|++++.
T Consensus 1 el~~~~p~~~~~~eaia~sAv~~a~~l~a~aIvv~T~sG~ta~~vSk~RP~~pI~a~T~~~~~~r~l~l~~GV~p~~~~~ 80 (134)
T d1a3xa3 1 DMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEK 80 (134)
T ss_dssp HHHTSSCSCCCHHHHHHHHHHHHHHHHTCSCCCEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHhcCCCCEEEEecCHHHhhhhhhhCCeEEEEecc
Confidence 456677777776 667777666 3689999999999999999999 599999999999999999999975
Q ss_pred C
Q psy257 152 T 152 (157)
Q Consensus 152 s 152 (157)
.
T Consensus 81 ~ 81 (134)
T d1a3xa3 81 E 81 (134)
T ss_dssp C
T ss_pred c
Confidence 3
No 7
>d2vgba3 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.9e-15 Score=110.17 Aligned_cols=69 Identities=17% Similarity=0.078 Sum_probs=59.3
Q ss_pred HHhhhccCCCCC-Cchhhhhhhh--------hhhhccccccceeeeeecCCC----CCCCChhhhhhccccceeeeeecC
Q psy257 85 ELKSMVSITKQY-ETIPTCLSYM--------SGWRTLNRETSVLLWHYRIGI----RTAKTSPAWLGGGYKGFIMLQKKS 151 (157)
Q Consensus 85 ~l~~~~~~~~~~-e~i~~~~a~a--------~i~~T~sg~~A~LLskyRP~~----~T~~~~t~r~l~l~~Gv~pl~~~~ 151 (157)
++++..|.+.++ |+++.+++.+ ++++|.+|++|+++|||||.+ +|++++++|||+|+|||+|++++.
T Consensus 1 elrr~~p~~~~~~eaia~sav~~A~~l~a~aIvv~T~sG~tar~vSk~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~ 80 (134)
T d2vgba3 1 ELRRAAPLSRDPTEVTAIGAVEAAFKCCAAAIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYRE 80 (134)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHTTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCS
T ss_pred CccccCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCcHHHHHHHhhcCCCCeeeeeCCHHHHHHhhhcCCceeeeecc
Confidence 456777777776 6777776663 688999999999999999999 699999999999999999999986
Q ss_pred CC
Q psy257 152 TD 153 (157)
Q Consensus 152 sd 153 (157)
.+
T Consensus 81 ~~ 82 (134)
T d2vgba3 81 PP 82 (134)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 8
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.41 E-value=5.5e-15 Score=107.24 Aligned_cols=51 Identities=18% Similarity=0.012 Sum_probs=47.1
Q ss_pred hhhhhccccccceeeeeecCCC----CCCCChhhhhhccccceeeeeecCCCCCC
Q psy257 106 MSGWRTLNRETSVLLWHYRIGI----RTAKTSPAWLGGGYKGFIMLQKKSTDPTD 156 (157)
Q Consensus 106 a~i~~T~sg~~A~LLskyRP~~----~T~~~~t~r~l~l~~Gv~pl~~~~sd~~~ 156 (157)
+++++|.+|.+|+++|||||.+ +|++++++|+|+|+|||+|++++..++.|
T Consensus 20 aIvv~T~sG~tar~iS~~RP~~pI~a~T~~~~~~r~l~l~~GV~p~~~~~~~~~~ 74 (117)
T d1e0ta3 20 LIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTD 74 (117)
T ss_dssp BEEEECSSSHHHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCCCSHH
T ss_pred EEEEEcCCChHHHHHHhhccCCceeeecCCHHHHHHhcccCCeeecccCCcCCHH
Confidence 4688999999999999999999 69999999999999999999999887654
No 9
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.33 E-value=6.4e-14 Score=103.89 Aligned_cols=56 Identities=16% Similarity=0.032 Sum_probs=49.6
Q ss_pred Cchhhhhhh--------hhhhhccccccceeeeeecCCC----CCCCChhhhhhccccceeeeeecCC
Q psy257 97 ETIPTCLSY--------MSGWRTLNRETSVLLWHYRIGI----RTAKTSPAWLGGGYKGFIMLQKKST 152 (157)
Q Consensus 97 e~i~~~~a~--------a~i~~T~sg~~A~LLskyRP~~----~T~~~~t~r~l~l~~Gv~pl~~~~s 152 (157)
|+++.+++. +++++|.+|++|+++|||||.+ +|++++++|+|+|+|||+|++++..
T Consensus 14 eaia~sav~~a~~l~akaIvv~T~sG~tar~vSk~RP~~PI~a~T~~~~~~r~L~L~~GV~p~~~~~~ 81 (135)
T d2g50a3 14 EAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDP 81 (135)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSC
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCChHHHHHHHhccCCCCeeEeecCHHHHhhhcccCCeeeeecccc
Confidence 566666666 3588999999999999999999 5999999999999999999999764
No 10
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=61.98 E-value=2.7 Score=33.26 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=27.4
Q ss_pred HHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeee
Q psy257 5 CNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVML 49 (157)
Q Consensus 5 c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imL 49 (157)
+...+.|||-+.-+-. .-|++.|+..|||+|||
T Consensus 197 ~~~~~vpvIAdGGi~~------------~gdiakAla~GAd~Vm~ 229 (330)
T d1vrda1 197 ARKYDVPIIADGGIRY------------SGDIVKALAAGAESVMV 229 (330)
T ss_dssp HHTTTCCEEEESCCCS------------HHHHHHHHHTTCSEEEE
T ss_pred HHhcCceEEecCCccc------------CCchheeeeccCceeee
Confidence 4566889998876544 56999999999999999
No 11
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]}
Probab=61.55 E-value=4.8 Score=30.88 Aligned_cols=40 Identities=28% Similarity=0.315 Sum_probs=32.8
Q ss_pred hhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHH
Q psy257 33 ISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 72 (157)
Q Consensus 33 vsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~ 72 (157)
-+|++.|...|+|||++-.==+..+.|+.-.+-|..-.+.
T Consensus 191 psdaa~AMElG~dgVLvnsaIa~A~dP~~mA~A~~~Av~a 230 (243)
T d1wv2a_ 191 ASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVA 230 (243)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCEEEechHhhcCCCHHHHHHHHHHHHHH
Confidence 4799999999999999977778899998877777555444
No 12
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=60.50 E-value=3.1 Score=33.47 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=26.7
Q ss_pred HHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 5 CNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 5 c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
+...+.|||--.-+= + .-|++.|+..|||+|||-
T Consensus 206 ~~~~~~~iIADGGi~---------~---~GDi~KAla~GAd~VMlG 239 (365)
T d1zfja1 206 AREYGKTIIADGGIK---------Y---SGDIVKALAAGGNAVMLG 239 (365)
T ss_dssp HHHTTCEEEEESCCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred HHhCCceEEecCCcC---------c---chhhhhhhhccCCEEEec
Confidence 466788888765532 2 579999999999999994
No 13
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=58.60 E-value=3.3 Score=33.38 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=27.5
Q ss_pred HHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 5 CNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 5 c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
++..+.|||-..-+-. --|++.|+-.|||+|||-
T Consensus 218 a~~~~vpIIADGGi~~------------~gdiakAla~GAd~VMmG 251 (378)
T d1jr1a1 218 ARRFGVPVIADGGIQN------------VGHIAKALALGASTVMMG 251 (378)
T ss_dssp HGGGTCCEEEESCCCS------------HHHHHHHHHTTCSEEEES
T ss_pred hcccCCceeccccccc------------CCceeeEEEeecceeeec
Confidence 4566889998776544 569999999999999994
No 14
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]}
Probab=57.47 E-value=3.3 Score=33.23 Aligned_cols=35 Identities=31% Similarity=0.416 Sum_probs=26.2
Q ss_pred HHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 4 KCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 4 ~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
.++..|.|||.-.- ..+ ..|++.|+..|||+|||-
T Consensus 211 ~~~~~~~~iiADGG---------i~~---~Gdi~KAla~GAd~VMlG 245 (368)
T d2cu0a1 211 RAQEYGLYVIADGG---------IRY---SGDIVKAIAAGADAVMLG 245 (368)
T ss_dssp HHHHHTCEEEEESC---------CCS---HHHHHHHHHTTCSEEEES
T ss_pred HHhccCCeeEecCC---------CCc---CChhheeeeeccceeecc
Confidence 34566788776543 333 579999999999999994
No 15
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=54.73 E-value=3.4 Score=33.30 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=25.8
Q ss_pred HHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 5 CNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 5 c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
++..+.|||--.-+ .+ -.||+.|+..|||+|||-
T Consensus 250 ~~~~~vpiIADGGi---------~~---~Gdi~KAla~GAd~VMlG 283 (388)
T d1eepa_ 250 CNNTNICIIADGGI---------RF---SGDVVKAIAAGADSVMIG 283 (388)
T ss_dssp HTTSSCEEEEESCC---------CS---HHHHHHHHHHTCSEEEEC
T ss_pred hccCCceEEecccc---------Cc---CCceeeeEEeccceeecc
Confidence 44557888865543 33 579999999999999993
No 16
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Probab=49.37 E-value=5.2 Score=28.34 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=25.0
Q ss_pred hHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeee
Q psy257 3 AKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVML 49 (157)
Q Consensus 3 ~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imL 49 (157)
..+...+.|||.+.-+ =| -.|+..+..-|||+||.
T Consensus 177 ~~~~~~~ipvia~GGI---------~t---~~d~~~al~~GAd~V~v 211 (230)
T d1yxya1 177 EALCKAGIAVIAEGKI---------HS---PEEAKKINDLGVAGIVV 211 (230)
T ss_dssp HHHHHTTCCEEEESCC---------CS---HHHHHHHHTTCCSEEEE
T ss_pred HHHhcCCCeEEEeCCC---------CC---HHHHHHHHHcCCCEEEE
Confidence 3455678888887543 22 34777788889999999
No 17
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}
Probab=47.63 E-value=20 Score=25.40 Aligned_cols=40 Identities=8% Similarity=0.146 Sum_probs=31.7
Q ss_pred HHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHH
Q psy257 35 DVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 74 (157)
Q Consensus 35 Dv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e 74 (157)
++.....-|+|+|-+.+.=-.-..|.++++.+.++++++.
T Consensus 166 ni~~~~~~Ga~gvAvis~I~~~~dp~~~~~~l~~~~~~~~ 205 (206)
T d1xi3a_ 166 NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEEVL 205 (206)
T ss_dssp THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEhHHHHCCCCHHHHHHHHHHHHHHhh
Confidence 4555666699999877665556789999999999988865
No 18
>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
Probab=46.65 E-value=20 Score=25.34 Aligned_cols=43 Identities=19% Similarity=0.180 Sum_probs=29.2
Q ss_pred hhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHH-HHhhCcceeeecCcccCCCChHHHHH
Q psy257 2 IAKCNKVGKPVICATQMLESMIKKPRATRAEISDVAN-AVLDGADCVMLSGETAKGDYPVECVR 64 (157)
Q Consensus 2 i~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~n-av~dg~d~imLs~ETa~G~~p~~~v~ 64 (157)
+++|+++|++|++-|- +++ .+.++ .+..|+|+|+- +||--..+
T Consensus 187 v~~~~~~Gl~v~~wTv------nd~-------~~~~~~l~~~gVdgI~T-------D~P~l~~~ 230 (240)
T d1zcca1 187 IEASRKAGLEIMVYYG------GDD-------MAVHREIATSDVDYINL-------DRPDLFAA 230 (240)
T ss_dssp HHHHHHHTCEEEEECC------CCC-------HHHHHHHHHSSCSEEEE-------SCHHHHHH
T ss_pred HHHHHHCCCEEEEEcc------CCH-------HHHHHHHHHcCCCEEEe-------CcHHHHHH
Confidence 6889999999998761 111 24554 45569999987 58844433
No 19
>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]}
Probab=46.59 E-value=9.1 Score=27.93 Aligned_cols=52 Identities=12% Similarity=0.249 Sum_probs=33.3
Q ss_pred hhHHHhcCCcEEEeehhhHHhhhCCCCC--chhhhHHHH--HHhhCcceeeecCcccCCCChHHHHHHH
Q psy257 2 IAKCNKVGKPVICATQMLESMIKKPRAT--RAEISDVAN--AVLDGADCVMLSGETAKGDYPVECVRAM 66 (157)
Q Consensus 2 i~~c~~~~kPvi~atq~LesM~~~~~pt--RaEvsDv~n--av~dg~d~imLs~ETa~G~~p~~~v~~~ 66 (157)
|+.|+++|..|++=| ++++... ..++.+... ....|+|||+- .||-.+++++
T Consensus 272 V~~~~~~gl~v~~wT------vn~~~~~~~~~d~~~~~~~~~~~~GVDgIiT-------D~P~~~~~~l 327 (328)
T d1ydya1 272 VQDAQQNKLVVHPYT------VRSDKLPEYTPDVNQLYDALYNKAGVNGLFT-------DFPDKAVKFL 327 (328)
T ss_dssp HHHHHHTTCEECCBC------BCTTSCCTTCSSHHHHHHHHHTTSCCSEEEE-------SCHHHHHHHH
T ss_pred HHHHHHCCCEEEEEc------cCChHHhhhccCHHHHHHHHHHHcCCcEEEE-------cCHHHHHHHh
Confidence 678999999999888 2222211 012222322 33459999986 5898888876
No 20
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]}
Probab=45.07 E-value=6.9 Score=27.36 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=28.0
Q ss_pred HHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCC
Q psy257 4 KCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKG 56 (157)
Q Consensus 4 ~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G 56 (157)
.......|||.+.-+- | ..|+..++.-|||++|+ | ||+.
T Consensus 170 ~~~~~~iPVia~GGI~---------t---~~d~~~~~~~GAdgV~i-G-sAi~ 208 (222)
T d1y0ea_ 170 VLQSVDAKVIAEGNVI---------T---PDMYKRVMDLGVHCSVV-G-GAIT 208 (222)
T ss_dssp HHHHCCSEEEEESSCC---------S---HHHHHHHHHTTCSEEEE-C-HHHH
T ss_pred HHhcCCCcEEEeCCCC---------C---HHHHHHHHHcCCCEEEE-c-hhhc
Confidence 3456678888876532 2 35899999999999999 3 2554
No 21
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]}
Probab=39.87 E-value=6.2 Score=31.34 Aligned_cols=17 Identities=35% Similarity=0.358 Sum_probs=16.0
Q ss_pred hhHHHHHHhhCcceeee
Q psy257 33 ISDVANAVLDGADCVML 49 (157)
Q Consensus 33 vsDv~nav~dg~d~imL 49 (157)
..|++.|+..|||+|||
T Consensus 232 ~gdi~KAla~GAd~VM~ 248 (362)
T d1pvna1 232 DYHMTLALAMGADFIML 248 (362)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred ccceeEEEEEeccceee
Confidence 56999999999999999
No 22
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}
Probab=38.73 E-value=19 Score=27.58 Aligned_cols=56 Identities=30% Similarity=0.354 Sum_probs=40.2
Q ss_pred HHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHH
Q psy257 5 CNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 72 (157)
Q Consensus 5 c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~ 72 (157)
+++...|||+-.- +=+ -||++.|...|+|+|++-.=-|..+.|+.--+-|..-++.
T Consensus 173 ~~~~~vPvIvDAG---------IG~---pSdAa~AMElG~daVLvNTAIA~a~dPv~MA~A~~~Av~A 228 (251)
T d1xm3a_ 173 IEQAKVPVIVDAG---------IGS---PKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEA 228 (251)
T ss_dssp HHHCSSCBEEESC---------CCS---HHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HhcCCccEEEecC---------CCC---HHHHHHHHHccCCEEEechhhhcCCCHHHHHHHHHHHHHH
Confidence 3456788887433 222 4699999999999999976667888997766655554444
No 23
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=37.99 E-value=13 Score=22.17 Aligned_cols=28 Identities=25% Similarity=0.421 Sum_probs=25.0
Q ss_pred hhhHHhhhCCCCCchhhhHHHHHHhhCc
Q psy257 17 QMLESMIKKPRATRAEISDVANAVLDGA 44 (157)
Q Consensus 17 q~LesM~~~~~ptRaEvsDv~nav~dg~ 44 (157)
++|+...++..-|+.|+.++.+.+++|-
T Consensus 4 ~il~kl~~g~~Ls~ee~~~~~~~i~~g~ 31 (69)
T d1khda1 4 PILEKLFKSQSMTQEESHQLFAAIVRGE 31 (69)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHcCC
Confidence 5789999999999999999999998763
No 24
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=34.75 E-value=13 Score=25.55 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=32.1
Q ss_pred hHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCCh
Q psy257 3 AKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYP 59 (157)
Q Consensus 3 ~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p 59 (157)
..+++.|--++-...+=| .+.++.+......+.+|.|+.||-|+.|+|=
T Consensus 34 ~~l~~~G~~v~~~~~v~D--------d~~~i~~~l~~~~~~~DivittGG~s~g~~D 82 (149)
T d2nqra3 34 LMLEQLGCEVINLGIIRD--------DPHALRAAFIEADSQADVVISSGGVSVGEAD 82 (149)
T ss_dssp HHHHHTTCEEEEEEEECS--------SHHHHHHHHHHHHHHCSEEEECSSSCSSSCS
T ss_pred hhhhhcceEEEEccccCC--------hHHHHHHHHHhcccccCEEEEcCCccCCchH
Confidence 456666665554443322 2345555555555679999999999999984
No 25
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]}
Probab=34.43 E-value=9.2 Score=28.90 Aligned_cols=18 Identities=39% Similarity=0.558 Sum_probs=16.3
Q ss_pred hhHHHHHHhhCcceeeec
Q psy257 33 ISDVANAVLDGADCVMLS 50 (157)
Q Consensus 33 vsDv~nav~dg~d~imLs 50 (157)
-.||+.|+..|||+||+.
T Consensus 243 g~Dv~KAlalGAdaV~iG 260 (329)
T d1p0ka_ 243 ALDVAKAIALGASCTGMA 260 (329)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCchhcc
Confidence 469999999999999993
No 26
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=31.81 E-value=68 Score=23.16 Aligned_cols=59 Identities=12% Similarity=0.071 Sum_probs=36.1
Q ss_pred hcCCcEEEeehhhHHhhhCCCCCchhhhHHH-HHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHH
Q psy257 7 KVGKPVICATQMLESMIKKPRATRAEISDVA-NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 74 (157)
Q Consensus 7 ~~~kPvi~atq~LesM~~~~~ptRaEvsDv~-nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e 74 (157)
.-..|||+.+. ..+-.|.-+.+ .|...|+|++|+..=--...-.-+.+++...|++...
T Consensus 68 ~~~~~vi~gv~---------~~st~~ai~~a~~A~~~Gad~v~v~pP~y~~~s~~~i~~~~~~ia~a~~ 127 (295)
T d1o5ka_ 68 DGKIPVIVGAG---------TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD 127 (295)
T ss_dssp TTSSCEEEECC---------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred ccCCceEeecc---------cccHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhccC
Confidence 33578888754 34444544433 4556699999997532222235667777777766554
No 27
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]}
Probab=31.73 E-value=12 Score=28.10 Aligned_cols=37 Identities=8% Similarity=0.032 Sum_probs=29.5
Q ss_pred hhHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 2 IAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 2 i~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
+..|+..|.+.++ |....+-..+..+.-.|++|||+-
T Consensus 59 i~a~~~~g~~~~V------------Rvp~~~~~~i~~~LD~Ga~GIivP 95 (253)
T d1dxea_ 59 LMALKGSASAPVV------------RVPTNEPVIIKRLLDIGFYNFLIP 95 (253)
T ss_dssp HHHTTTCSSEEEE------------ECSSSCHHHHHHHHHTTCCEEEES
T ss_pred HHHHhccCCCcee------------cCCCCCHHHHHHHHhcCccEEEec
Confidence 5677888888876 444456788999999999999993
No 28
>d2v3ka1 c.116.1.6 (A:25-251) Essential for mitotic growth 1, EMG1 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=31.66 E-value=9.1 Score=28.67 Aligned_cols=26 Identities=27% Similarity=0.457 Sum_probs=23.2
Q ss_pred CcccCCCChHHHHHHHHHHHHHHHHh
Q psy257 51 GETAKGDYPVECVRAMHNTCKEAEAA 76 (157)
Q Consensus 51 ~ETa~G~~p~~~v~~~~~i~~~~e~~ 76 (157)
.|-++|+||+.|....++||.+.|..
T Consensus 199 e~ISIsdypLSa~~v~sri~~~~E~~ 224 (227)
T d2v3ka1 199 EKVGLSNYPLSASVACSKFCHGAEDA 224 (227)
T ss_dssp EEEBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCcchhHHHHHHHHHHHHHHH
Confidence 35689999999999999999999964
No 29
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=31.32 E-value=20 Score=26.47 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=23.5
Q ss_pred hcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeec
Q psy257 7 KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 50 (157)
Q Consensus 7 ~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs 50 (157)
..+.|+|-..-+.. ..|+...++.|||+||+-
T Consensus 239 ~~~ipIig~GGI~s------------~~Da~~~i~~GAd~V~ig 270 (311)
T d1ep3a_ 239 DVDIPIIGMGGVAN------------AQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp TCSSCEEECSSCCS------------HHHHHHHHHHTCSEEEEC
T ss_pred hcceeEEEeCCcCC------------HHHHHHHHHcCCCEEEec
Confidence 34667776555443 348999999999999994
No 30
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase {Thermus thermophilus [TaxId: 274]}
Probab=29.12 E-value=13 Score=27.43 Aligned_cols=18 Identities=33% Similarity=0.313 Sum_probs=16.2
Q ss_pred hhHHHHHHhhCcceeeec
Q psy257 33 ISDVANAVLDGADCVMLS 50 (157)
Q Consensus 33 vsDv~nav~dg~d~imLs 50 (157)
-.||+.|+..|||+||+-
T Consensus 246 g~Dv~KALalGAdaV~iG 263 (310)
T d1vcfa1 246 GTDGAKALALGADLLAVA 263 (310)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHhCCCEeeEh
Confidence 469999999999999993
No 31
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=27.81 E-value=37 Score=23.83 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=29.1
Q ss_pred HHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHH
Q psy257 4 KCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 72 (157)
Q Consensus 4 ~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~ 72 (157)
.+-..|+|||+. . .+. +...+.+|-+|..+ .....+-+..+.+.+++..
T Consensus 288 EAma~G~PvI~s-~---------~~g------~~e~i~~~~~G~l~----~~~~d~~~la~~i~~ll~d 336 (370)
T d2iw1a1 288 EAITAGLPVLTT-A---------VCG------YAHYIADANCGTVI----AEPFSQEQLNEVLRKALTQ 336 (370)
T ss_dssp HHHHHTCCEEEE-T---------TST------TTHHHHHHTCEEEE----CSSCCHHHHHHHHHHHHHC
T ss_pred ecccCCeeEEEe-C---------CCC------hHHHhcCCCceEEE----cCCCCHHHHHHHHHHHHcC
Confidence 456779999863 1 222 22346678888777 2333466666666666553
No 32
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=24.66 E-value=14 Score=21.71 Aligned_cols=23 Identities=22% Similarity=0.567 Sum_probs=17.5
Q ss_pred ehhhHHhhhCCCCCchhhhHHHHH
Q psy257 16 TQMLESMIKKPRATRAEISDVANA 39 (157)
Q Consensus 16 tq~LesM~~~~~ptRaEvsDv~na 39 (157)
.++|+.+.++| -||+|+.+..+-
T Consensus 2 s~Il~~i~~~p-isr~eLa~~~gl 24 (62)
T d2hoea1 2 SRILKRIMKSP-VSRVELAEELGL 24 (62)
T ss_dssp CCSHHHHHHSC-BCHHHHHHHHTC
T ss_pred HHHHHHHHHCC-cCHHHHHHHHCc
Confidence 35788888888 499998887643
No 33
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=24.34 E-value=50 Score=24.09 Aligned_cols=50 Identities=16% Similarity=0.117 Sum_probs=36.3
Q ss_pred CCCCCchhhhHHHHHHhhCcceeeecCcccCC-CChHHHHHHHHHHHHHHHHh
Q psy257 25 KPRATRAEISDVANAVLDGADCVMLSGETAKG-DYPVECVRAMHNTCKEAEAA 76 (157)
Q Consensus 25 ~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G-~~p~~~v~~~~~i~~~~e~~ 76 (157)
...|-+....+|-.|+..|+||+.+.- -.| .+..+.++.+.++.++++..
T Consensus 85 ~~~~~~~~~~sve~a~rlGadaV~~~v--~~g~~~e~~~l~~~~~v~~e~~~~ 135 (251)
T d1ojxa_ 85 NGEPVSVANCSVEEAVSLGASAVGYTI--YPGSGFEWKMFEELARIKRDAVKF 135 (251)
T ss_dssp CSSCCCEESSCHHHHHHTTCSEEEEEE--CTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCHHHHHhchhceEEEEE--eCCCCchHHHHHHHHHHHHHHHHc
Confidence 344555567889999999999997753 334 56677788888888777654
No 34
>d1hg3a_ c.1.1.1 (A:) Triosephosphate isomerase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=23.64 E-value=29 Score=24.78 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=27.8
Q ss_pred hhHHHHHHhhCcceeeecCcccCCCChHHHHHHHH
Q psy257 33 ISDVANAVLDGADCVMLSGETAKGDYPVECVRAMH 67 (157)
Q Consensus 33 vsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~ 67 (157)
-+|+.-+...|+||++..+-....+.|.+.++-|.
T Consensus 187 ~n~~~~~~~~g~dGvLVGsAsl~a~d~~~~~~~l~ 221 (224)
T d1hg3a_ 187 GEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLV 221 (224)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEcceeecCcCHHHHHHHHH
Confidence 35788888899999999887778888877766553
No 35
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=25 Score=20.63 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=19.3
Q ss_pred ehhhHHhh----hCCCCCchhhhHHHHHH
Q psy257 16 TQMLESMI----KKPRATRAEISDVANAV 40 (157)
Q Consensus 16 tq~LesM~----~~~~ptRaEvsDv~nav 40 (157)
+++|+..- .||-|+..|...+|...
T Consensus 14 ~~iL~~wf~~~~~nPyPs~~e~~~La~~~ 42 (62)
T d1x2na1 14 TNVMRSWLFQHIGHPYPTEDEKKQIAAQT 42 (62)
T ss_dssp HHHHHHHHHHTTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCHHHHHHHHHHH
Confidence 56677643 38999999999998774
No 36
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=21.99 E-value=38 Score=19.77 Aligned_cols=46 Identities=17% Similarity=0.248 Sum_probs=32.5
Q ss_pred hhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCChHHHHHHHHHHHHHHH
Q psy257 17 QMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 74 (157)
Q Consensus 17 q~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~p~~~v~~~~~i~~~~e 74 (157)
++|+...+.-..|+.|+..+.+.+.+|-=. |.+.-.++..+-..-|
T Consensus 5 ~il~~l~~g~~Ls~~e~~~~~~~i~~g~~s------------~~qiaafL~al~~kGe 50 (70)
T d1o17a1 5 EILKKLINKSDLEINEAEELAKAIIRGEVP------------EILVSAILVALRMKGE 50 (70)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHTTCSC------------HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHcCCCC------------HHHHHHHHHHHHHcCC
Confidence 567788888889999999999999866421 5555555555544433
No 37
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=21.77 E-value=21 Score=24.23 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=14.1
Q ss_pred hhhhHHHHHHhhCcceeeecCcccCCCC
Q psy257 31 AEISDVANAVLDGADCVMLSGETAKGDY 58 (157)
Q Consensus 31 aEvsDv~nav~dg~d~imLs~ETa~G~~ 58 (157)
.++.+.-+...+.+|.|+.||-|+.|++
T Consensus 58 ~~i~~~l~~~~~~~DlvIttGG~s~g~~ 85 (144)
T d1wu2a3 58 SIIKETLEKAKNECDIVLITGGSAFGDK 85 (144)
T ss_dssp HHHTTHHHHHHHCSEEEECC--------
T ss_pred HHHHHHHHHhhhcccEEEEccccccCcc
Confidence 3455555545578999999999999976
No 38
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]}
Probab=21.60 E-value=26 Score=26.60 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=24.6
Q ss_pred CCcEEEeehhhHHhhhCCCCCchhhhHHHHHHh-hCcceeeecCcccCCCCh
Q psy257 9 GKPVICATQMLESMIKKPRATRAEISDVANAVL-DGADCVMLSGETAKGDYP 59 (157)
Q Consensus 9 ~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~-dg~d~imLs~ETa~G~~p 59 (157)
..|||. +..+-+.. |+.+... -|+||||+ |+-+.|+ |
T Consensus 179 ~ipvi~---------NGdI~s~~---d~~~~l~~tg~dgVMi-GRgal~n-P 216 (305)
T d1vhna_ 179 RIPTFV---------SGDIFTPE---DAKRALEESGCDGLLV-ARGAIGR-P 216 (305)
T ss_dssp SSCEEE---------ESSCCSHH---HHHHHHHHHCCSEEEE-SGGGTTC-T
T ss_pred hhhhhc---------ccccccHH---HHHHHHHhcCCCeEeh-hHHHHHh-h
Confidence 578875 44455543 5555554 49999999 7767776 5
No 39
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=21.12 E-value=19 Score=24.07 Aligned_cols=16 Identities=19% Similarity=0.387 Sum_probs=14.0
Q ss_pred hhHHHhcCCcEEEeeh
Q psy257 2 IAKCNKVGKPVICATQ 17 (157)
Q Consensus 2 i~~c~~~~kPvi~atq 17 (157)
++.|.+.++|+++.|=
T Consensus 58 l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 58 VDLCKKYRAGLVLGTT 73 (128)
T ss_dssp HHHHHHHTCEEEECCC
T ss_pred HHHHHhcCCCEEEEcC
Confidence 6789999999999875
No 40
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=21.01 E-value=21 Score=23.77 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=26.1
Q ss_pred hhHHHhcCCcEEEeehhhHHhhhCCCCCchh----hhHHHHHHhhCcceeeecC
Q psy257 2 IAKCNKVGKPVICATQMLESMIKKPRATRAE----ISDVANAVLDGADCVMLSG 51 (157)
Q Consensus 2 i~~c~~~~kPvi~atq~LesM~~~~~ptRaE----vsDv~nav~dg~d~imLs~ 51 (157)
++.+++.|.||++.|..-.....+.-|--.= ...-++.++..+|+|++=|
T Consensus 40 ~~lae~l~~pv~~t~~~~~~~~~~~~p~~~G~~~~~~~~~~~~l~~aDlil~lG 93 (160)
T d1q6za1 40 VMLAERLKAPVWVAPSAPRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIG 93 (160)
T ss_dssp HHHHHHHTCCEEECSSCSBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEES
T ss_pred HHHHHhcCceEEeecccccccccccccccccccccCcHHHHHHHhcCCeEEEEe
Confidence 4566777777777665444433322222110 1122455567788877765
No 41
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=20.81 E-value=69 Score=21.22 Aligned_cols=49 Identities=18% Similarity=0.307 Sum_probs=30.6
Q ss_pred hhHHHhcCCcEEEeehhhHHhhhCCCCCchhhh---HHHHHHh------hCcceeeecCcccCC
Q psy257 2 IAKCNKVGKPVICATQMLESMIKKPRATRAEIS---DVANAVL------DGADCVMLSGETAKG 56 (157)
Q Consensus 2 i~~c~~~~kPvi~atq~LesM~~~~~ptRaEvs---Dv~nav~------dg~d~imLs~ETa~G 56 (157)
+..+.+.|+|+|++-+.+| .+...+.. +...-++ .+...+-.|+.|..|
T Consensus 104 ~~~~~~~~~p~iiv~NKiD------~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~iSA~~g~g 161 (179)
T d1wb1a4 104 MLILDHFNIPIIVVITKSD------NAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFG 161 (179)
T ss_dssp HHHHHHTTCCBCEEEECTT------SSCHHHHHHHHHHHHHHHHHSSSGGGCCEEECCTTTCTT
T ss_pred hhhhhhcCCcceecccccc------ccCHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEccCCcC
Confidence 4567789999999987776 33333322 2222222 245677789988887
No 42
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=20.60 E-value=25 Score=23.81 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=27.1
Q ss_pred hHHHhcCCcEEEeehhhHHhhhCCCCCchhhhHHHHHHhhCcceeeecCcccCCCC
Q psy257 3 AKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDY 58 (157)
Q Consensus 3 ~~c~~~~kPvi~atq~LesM~~~~~ptRaEvsDv~nav~dg~d~imLs~ETa~G~~ 58 (157)
+.++++|--++....+=| .+.++.+......+.+|.|+.||-|+.|++
T Consensus 34 ~~l~~~G~~v~~~~~v~D--------d~~~i~~~i~~~~~~~DliIttGG~s~g~~ 81 (148)
T d1uz5a3 34 DAINELGGEGIFMGVARD--------DKESLKALIEKAVNVGDVVVISGGASGGTK 81 (148)
T ss_dssp HHHHHHTSEEEEEEEECS--------SHHHHHHHHHHHHHHCSEEEEECCC-----
T ss_pred Hhhhcccccceeeeeecc--------HHHHHHHHHHhhhccccEEEECCCcccchh
Confidence 345555555544333211 345666666666677999999999999987
No 43
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=20.53 E-value=39 Score=24.62 Aligned_cols=27 Identities=15% Similarity=0.255 Sum_probs=19.0
Q ss_pred HHhhCcceeeecCc---ccCCCChHHHHHHH
Q psy257 39 AVLDGADCVMLSGE---TAKGDYPVECVRAM 66 (157)
Q Consensus 39 av~dg~d~imLs~E---Ta~G~~p~~~v~~~ 66 (157)
++..||+++|. || |+.|.-+-+-++++
T Consensus 273 ~L~~Gan~~~~-~~~~~t~~~~~~~~~~~~i 302 (312)
T d1r30a_ 273 CFMAGANSIFY-GCKLLTTPNPEEDKDLQLF 302 (312)
T ss_dssp HHHHTCCEEEC-SSBSSSSBCCCHHHHHHHH
T ss_pred HHhcCCcEEEe-cCccccCCCCCHHHHHHHH
Confidence 68899999997 44 67777665554443
No 44
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=20.43 E-value=27 Score=23.41 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=19.1
Q ss_pred HHhhhCCCCCchhhhHHHHHHhhCcceeeecC
Q psy257 20 ESMIKKPRATRAEISDVANAVLDGADCVMLSG 51 (157)
Q Consensus 20 esM~~~~~ptRaEvsDv~nav~dg~d~imLs~ 51 (157)
|--.....|--. +|-.++..|+.|.+|||
T Consensus 65 Ep~r~~l~P~~~---~ik~~l~~ga~~~~lSG 93 (133)
T d1h72c2 65 EPVRGKLIPNYF---KIKEEVKDKVYGITISG 93 (133)
T ss_dssp HHHHHTTSTTHH---HHHHHHTTTEEEEEECT
T ss_pred CceecccCCchH---HHHHHhhcCceEEEEeC
Confidence 333344555544 45556788999999986
No 45
>d1znna1 c.1.2.6 (A:18-271) Pyridoxal biosynthesis lyase PdxS {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.27 E-value=56 Score=24.77 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=27.1
Q ss_pred hhHHHHHHhhCcceeeecCcccCCCChHHHHH
Q psy257 33 ISDVANAVLDGADCVMLSGETAKGDYPVECVR 64 (157)
Q Consensus 33 vsDv~nav~dg~d~imLs~ETa~G~~p~~~v~ 64 (157)
=+|.+-+...|+|||++-..-+..+.|.+-.+
T Consensus 201 padaa~~MelG~dgV~v~s~I~~s~dP~~~a~ 232 (254)
T d1znna1 201 PADAALMMHLGADGVFVGSGIFKSENPEKYAR 232 (254)
T ss_dssp HHHHHHHHHTTCSEEEECGGGGGSSCHHHHHH
T ss_pred hhhHHHHHHcCCCEEEEcchhhcCCCHHHHHH
Confidence 46899999999999999888889999976333
Done!