Query psy2570
Match_columns 440
No_of_seqs 103 out of 131
Neff 4.0
Searched_HMMs 46136
Date Fri Aug 16 19:33:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2570.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2570hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3978|consensus 100.0 2E-101 5E-106 766.9 20.4 345 23-439 2-355 (469)
2 PF10268 Tmemb_161AB: Predicte 100.0 7.5E-97 2E-101 767.7 24.9 350 17-439 7-365 (486)
3 KOG3978|consensus 99.9 4.8E-23 1.1E-27 207.0 7.2 187 170-390 93-292 (469)
4 PF10268 Tmemb_161AB: Predicte 99.7 4.7E-17 1E-21 171.0 7.3 153 170-353 103-260 (486)
5 PF15048 OSTbeta: Organic solu 30.3 48 0.001 30.4 2.9 32 238-269 24-55 (125)
6 PRK12585 putative monovalent c 27.7 3.9E+02 0.0085 26.4 8.6 18 409-426 118-135 (197)
7 KOG3031|consensus 27.1 56 0.0012 33.9 3.0 53 58-118 223-277 (307)
8 PF07960 CBP4: CBP4; InterPro 18.8 60 0.0013 29.9 1.2 17 58-74 25-41 (128)
9 COG1377 FlhB Flagellar biosynt 15.7 1.4E+03 0.03 24.6 10.9 95 309-406 146-250 (363)
10 cd07687 IgC_TCR_delta Immunogl 15.6 55 0.0012 27.8 0.2 22 105-127 15-36 (80)
No 1
>KOG3978|consensus
Probab=100.00 E-value=2.3e-101 Score=766.93 Aligned_cols=345 Identities=37% Similarity=0.644 Sum_probs=316.1
Q ss_pred HHHHHHHhcccccccccccccccccceeeEEeccceeeeeCCCHHHHHhhhCCCCcccccccCccccccccCCCCCccCC
Q psy2570 23 MRKILFTLTLEYFKGEESVGERSTVIASFWLLRAGLIRYLYPTNDELRTLAGVPKERSKSKRNSKEKKYERNGSGDQFSQ 102 (440)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~sf~r~lLc~~gL~ry~~Pt~~eLr~lag~~k~k~k~K~~~k~r~~~~ng~~~~~~~ 102 (440)
|+++|+||. ||+|||||++||||||||+||||||||+++|+||+ ||++|+ |+ +||. ..
T Consensus 2 ~itli~kL~------------ph~sFa~w~lcng~LyRylhPs~~ELral~g~pk~-p~g~rn---r~--ang~----~~ 59 (469)
T KOG3978|consen 2 AITLISKLV------------PHASFADWFLCNGSLYRYLHPSNQELRALLGPPKE-PMGQRN---RR--ANGE----DE 59 (469)
T ss_pred hhhHHhHhc------------cccchhheeeecCceeeecCCChHHHHhhCCCCCC-CCcccc---hh--ccCC----cc
Confidence 678999999 99999999999999999999999999999999985 565553 44 4763 15
Q ss_pred CcceeeecccccccceeeeeceeeeeeecccccchhhhHHHHHHHHHHHhHhhhhhccCCccchhhHHHHHHHHHHHHHH
Q psy2570 103 SKETFHVPKNINLELQSAKITSLDVVHLRYYSEYQWLLDYALYSLFVYTLTEVYTSFIPLDHEINLSMLWCLVVQCFTLK 182 (440)
Q Consensus 103 ~~~~f~vPr~~~i~L~~~~it~~D~~~L~~y~e~~Wl~df~~~~~~vy~~tE~y~~~~~~~~e~Nls~~W~ll~~~F~lk 182 (440)
+.++|++|||+++||++.|++..|+++||||+||||++||++|+.+||++||+|++.+|+++|+|+|++||+++++|++|
T Consensus 60 a~~~fslPrs~pfqL~t~Pv~~~D~v~lr~fteyqWl~df~vy~g~VY~~sE~y~y~~p~~~e~NvsivwcLlvI~F~lk 139 (469)
T KOG3978|consen 60 AAEGFSLPRSSPFQLNTYPVDVKDLVQLRMFTEYQWLCDFIVYCGFVYTLSEVYNYIMPDNREFNVSIVWCLLVIMFVLK 139 (469)
T ss_pred cccCCCCCCCCcceeecCCchhHHHHHHHHHHHHHHHHHHHHHhhheeeHHHHHHHhcCCccccchhhHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccCCcccceeeeehhHHHHHHHHHHHHHhhhccccchhhhhhhhhhhhccCCCcCccchhhhhhHHHHH
Q psy2570 183 ILFTLTLEYFKGEESVGERSTVIVTGFAYLVIAMMILIVDEAKLETPLTILFTLTLEYFKGEESVGERSTVIVTGFAYLV 262 (440)
Q Consensus 183 vl~~lt~~Yf~~~~~~gErs~~i~~~~~~~~~~~~~~~~~~~~~~~~lK~l~slt~~YF~~eeg~GERS~~ivfgf~~ll 262 (440)
++.++|.+||+++|+ ||||+||+ +||+|++
T Consensus 140 ~l~alt~lyfssee~-geRs~~is-------------------------------------------------~~~lylL 169 (469)
T KOG3978|consen 140 VLTALTSLYFSSEEE-GERSFMIS-------------------------------------------------IGCLYLL 169 (469)
T ss_pred HHHHHHHHheecccc-ccceeehH-------------------------------------------------HHHHHHH
Confidence 999999999999888 66666665 9999999
Q ss_pred HHHHHHHhhcceeeeccchhhhccchhHHHHhhhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhcccchhhhhccccccc
Q psy2570 263 IAMMILIVDEAKLETGLHSAYASFNESAATFLHNQGLNSEGPASKIIINFCIAIWCALIGALFTFPGLRMARMHWDSLKL 342 (440)
Q Consensus 263 ~Am~~Liva~~vLevgL~e~ylefg~~~a~f~~~~~L~~qg~~S~~~~kl~la~~~a~igalltFPGLR~A~m~fpgLRl 342 (440)
+||++.+++|+++|+|++|+|.+++.|++.|+++||+.+.+|.+|+++++.++++|+++||++||||+|+|+||+|+|.+
T Consensus 170 ~amiv~~v~erile~gle~ayas~s~n~~~fl~~qGl~~~~P~~kl~~~i~Lav~~s~Lga~ltFPglR~A~mh~daL~~ 249 (469)
T KOG3978|consen 170 FAMIVAMVSERILEIGLEEAYASLSTNIADFLESQGLFDNSPTNKLMMYISLAVFFSMLGAMLTFPGLRCAIMHLDALEN 249 (469)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHhhhHHHHHHhcCCCcCCCcchhHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred ccch--hhh-HHHHHHHHHHHHHHhhhhhh-----hhhhhhhhhhhhHHHhhhhcchhHHHHHHHhH-hhhhhhHHHHhh
Q psy2570 343 TESG--FDS-LRLVLIVVLILQRLALMPIY-----LQAYLNMAYARVEEQRKEAGRITNVELQKKGD-VLMHGFLWVYLN 413 (440)
Q Consensus 343 aq~h--fDs-LRl~llv~l~vlrL~~~pi~-----LQayLnlA~~~vs~~~fEagRI~~V~lq~~lr-~v~~yhLQaYLn 413 (440)
.+.. ... +...++.|+.++.+|.+|+. ...+.++-++++++..|||||+|.+++.|.+| ++||+|+|||||
T Consensus 250 ~~~~~mlq~Llh~sFllP~fil~lw~kPi~rd~l~~p~f~~~~~~ll~~~~fds~rl~llv~l~llr~av~~~~lqayl~ 329 (469)
T KOG3978|consen 250 DGRIPMLQSLLHVSFLLPAFILALWSKPIVRDLLQGPRFVETRFSLLSDSAFDSGRLWLLVVLCLLRLAVTRPHLQAYLC 329 (469)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCCcccceeccccCchhhccchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 6543 222 23346888888888888886 23344888999999999999999999999999 999999999999
Q ss_pred hHHHhHHHHhhhhCccchHHhhhhhc
Q psy2570 414 MAYARVEEQRKEAGRITNVELQKKVN 439 (440)
Q Consensus 414 lA~~rve~lkkEAGRItnvelQrkV~ 439 (440)
+|++|+||+|||||||+|+|+|+||.
T Consensus 330 la~~rv~~lrreagri~~~e~qqrv~ 355 (469)
T KOG3978|consen 330 LAKARVEQLRREAGRIEAREIQQRVV 355 (469)
T ss_pred HHHHHHHHHHHHhCCccHHHHHhhhh
Confidence 99999999999999999999999986
No 2
>PF10268 Tmemb_161AB: Predicted transmembrane protein 161AB; InterPro: IPR019395 This entry represents a family of conserved eukaryotic proteins. Members are putative transmembrane proteins but otherwise the function is not known.
Probab=100.00 E-value=7.5e-97 Score=767.72 Aligned_cols=350 Identities=45% Similarity=0.775 Sum_probs=319.9
Q ss_pred hHHHHHHHHHHHHhcccccccccccccccccceeeEEeccceeeeeCCCHHHHHhhhCCCCcccccccCccccccccCCC
Q psy2570 17 IIFDMWMRKILFTLTLEYFKGEESVGERSTVIASFWLLRAGLIRYLYPTNDELRTLAGVPKERSKSKRNSKEKKYERNGS 96 (440)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sf~r~lLc~~gL~ry~~Pt~~eLr~lag~~k~k~k~K~~~k~r~~~~ng~ 96 (440)
+|++|+|++|+||+. ||||||||+||||||+||+||||||||++|||||. +|+|| +|| .||+
T Consensus 7 lv~tli~asvi~kl~------------p~~sfarwll~~g~L~ryl~Psd~eL~~lagk~~~-~k~~k---~r~--~ng~ 68 (486)
T PF10268_consen 7 LVVTLIMASVIQKLI------------PHFSFARWLLCNGGLTRYLHPSDEELRALAGKQKK-PKGKK---DRR--ANGQ 68 (486)
T ss_pred hHHHHHHHHHHHHhh------------ccCCHHHHHHhccceEEeCCCCHHHHHHHcCCCCC-CCCcC---CCc--ccCC
Confidence 689999999999999 99999999999999999999999999999998775 55544 344 3886
Q ss_pred CCccCCCcceeeecccccccceeeeeceeeeeeecccccchhhhHHHHHHHHHHHhHhhhhhccCCccchhhHHHHHHHH
Q psy2570 97 GDQFSQSKETFHVPKNINLELQSAKITSLDVVHLRYYSEYQWLLDYALYSLFVYTLTEVYTSFIPLDHEINLSMLWCLVV 176 (440)
Q Consensus 97 ~~~~~~~~~~f~vPr~~~i~L~~~~it~~D~~~L~~y~e~~Wl~df~~~~~~vy~~tE~y~~~~~~~~e~Nls~~W~ll~ 176 (440)
.++++|+||||+|+||+++|||+.|+++||||+|||||+||++++++||++||+|++++|+++|+|+|++||+++
T Consensus 69 -----~~~~~f~vpr~~~l~L~~~pv~~~d~l~L~~Y~ey~WLvdFav~~~~Vyl~tE~y~~~~~~~~e~Nisv~w~lL~ 143 (486)
T PF10268_consen 69 -----VEDKPFTVPRDIDLQLETAPVTPSDVLVLRYYTEYQWLVDFAVYALVVYLFTEVYYFFVPPSTEFNISVVWCLLV 143 (486)
T ss_pred -----CCCCCeecCccCCcceeeccccHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCcccchHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCcccceeeeehhHHHHHHHHHHHHHhhhccccchhhhhhhhhhhhccCCCcCccchhhhh
Q psy2570 177 QCFTLKILFTLTLEYFKGEESVGERSTVIVTGFAYLVIAMMILIVDEAKLETPLTILFTLTLEYFKGEESVGERSTVIVT 256 (440)
Q Consensus 177 ~~F~lkvl~~lt~~Yf~~~~~~gErs~~i~~~~~~~~~~~~~~~~~~~~~~~~lK~l~slt~~YF~~eeg~GERS~~ivf 256 (440)
++|++|+++++|.+||++++| ||||+||++
T Consensus 144 v~F~lk~L~sLt~~yf~s~~~--------------------------------------------------gErs~~l~~ 173 (486)
T PF10268_consen 144 VFFALKVLFSLTRLYFSSEEG--------------------------------------------------GERSVCLAF 173 (486)
T ss_pred HHHHHHHHHHHHHHHHhcCCC--------------------------------------------------cceehhHHH
Confidence 999999999999999998877 555555559
Q ss_pred hHHHHHHHHHHHHhhcceeeeccchhhhccchhHHHHhhhcCCCCCCCCchhHHHHHHHHHHHHHhhhhhcccchhhhhc
Q psy2570 257 GFAYLVIAMMILIVDEAKLETGLHSAYASFNESAATFLHNQGLNSEGPASKIIINFCIAIWCALIGALFTFPGLRMARMH 336 (440)
Q Consensus 257 gf~~ll~Am~~Liva~~vLevgL~e~ylefg~~~a~f~~~~~L~~qg~~S~~~~kl~la~~~a~igalltFPGLR~A~m~ 336 (440)
||++|++||++++++++++|+|++++|.+++++.+.|+++||+++++|.|+..+++.++++|+++||+++|||+|+|+||
T Consensus 174 gf~~fl~am~vliv~e~~lefgLe~ay~s~~~~~~~fl~~qg~~~~~p~skl~l~l~LAv~~~~lga~L~FPglR~Arm~ 253 (486)
T PF10268_consen 174 GFFFFLLAMFVLIVDERILEFGLEPAYASLSQNAAQFLEQQGLDSSGPLSKLMLKLFLAVLCGLLGAFLTFPGLRLARMH 253 (486)
T ss_pred HHHHHHHHHHHhhcccceeeeccHHHHHHHHHHHHHHHHhcCCCccCcchHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchh-hh--HHHHHHHHHHHHHHhhhhhh----hhhhh-hhhhhhhHHHhhhhcchhHHHHHHHhH-hhhhhh
Q psy2570 337 WDSLKLTESGF-DS--LRLVLIVVLILQRLALMPIY----LQAYL-NMAYARVEEQRKEAGRITNVELQKKGD-VLMHGF 407 (440)
Q Consensus 337 fpgLRlaq~hf-Ds--LRl~llv~l~vlrL~~~pi~----LQayL-nlA~~~vs~~~fEagRI~~V~lq~~lr-~v~~yh 407 (440)
+|+++++++.. -- |.+-++.|+++.-+|++|++ .++.+ +++.+.|++.+||+.|||.+.+.|.+| .++|+|
T Consensus 254 ~dal~~~~~~~~~~~lLh~nfl~P~~~~llWikPiar~~l~~~~~~~~~~~llt~~~f~~lRl~~vi~~~~lrl~~~r~h 333 (486)
T PF10268_consen 254 WDALKMASDSPLLQLLLHLNFLLPLFILLLWIKPIARDYLQNPPFGKMSIPLLTESQFDTLRLWLVILLCLLRLALMRPH 333 (486)
T ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHHHhhHhHHHHccCCCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875431 11 22235777777777777776 23333 888999999999999999999999999 999999
Q ss_pred HHHHhhhHHHhHHHHhhhhCccchHHhhhhhc
Q psy2570 408 LWVYLNMAYARVEEQRKEAGRITNVELQKKVN 439 (440)
Q Consensus 408 LQaYLnlA~~rve~lkkEAGRItnvelQrkV~ 439 (440)
||||||+|++|+||+|||||||+|+|+||||+
T Consensus 334 LQaYLnlA~~~~~~~r~eag~i~~~e~q~kv~ 365 (486)
T PF10268_consen 334 LQAYLNLAQDRVEQMRKEAGRITNVELQRKVA 365 (486)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999996
No 3
>KOG3978|consensus
Probab=99.88 E-value=4.8e-23 Score=206.98 Aligned_cols=187 Identities=22% Similarity=0.256 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCcccceeeeehhHHHHHHHHHHHHHhhhccccchhhhhhhhhhhhccCCCcCc
Q psy2570 170 MLWCLVVQCFTLKILFTLTLEYFKGEESVGERSTVIVTGFAYLVIAMMILIVDEAKLETPLTILFTLTLEYFKGEESVGE 249 (440)
Q Consensus 170 ~~W~ll~~~F~lkvl~~lt~~Yf~~~~~~gErs~~i~~~~~~~~~~~~~~~~~~~~~~~~lK~l~slt~~YF~~eeg~GE 249 (440)
-=|...-+.+|. .+|++|+.|+--..+..|-|++++||+ +||.|+ +|++.++|+.||++||+ ||
T Consensus 93 yqWl~df~vy~g-~VY~~sE~y~y~~p~~~e~NvsivwcL--lvI~F~------------lk~l~alt~lyfssee~-ge 156 (469)
T KOG3978|consen 93 YQWLCDFIVYCG-FVYTLSEVYNYIMPDNREFNVSIVWCL--LVIMFV------------LKVLTALTSLYFSSEEE-GE 156 (469)
T ss_pred HHHHHHHHHHhh-heeeHHHHHHHhcCCccccchhhHHHH--HHHHHH------------HHHHHHHHHHheecccc-cc
Confidence 346665555553 468999999888888899999999997 899888 99999999999999999 99
Q ss_pred cchhhhhhHHHHHHHHHHHHhhcceeeeccchhhhccc--hhHHHHhhhcC--CCCCCCCch-hHHHHHHHHHHHHHhhh
Q psy2570 250 RSTVIVTGFAYLVIAMMILIVDEAKLETGLHSAYASFN--ESAATFLHNQG--LNSEGPASK-IIINFCIAIWCALIGAL 324 (440)
Q Consensus 250 RS~~ivfgf~~ll~Am~~Liva~~vLevgL~e~ylefg--~~~a~f~~~~~--L~~qg~~S~-~~~kl~la~~~a~igal 324 (440)
|| +|+++|..+++++|.++.+ +|..+|.| ++++++++|.. +++||+.|. |..|+.+.+.+|+.|++
T Consensus 157 Rs-------~~is~~~lylL~amiv~~v--~erile~gle~ayas~s~n~~~fl~~qGl~~~~P~~kl~~~i~Lav~~s~ 227 (469)
T KOG3978|consen 157 RS-------FMISIGCLYLLFAMIVAMV--SERILEIGLEEAYASLSTNIADFLESQGLFDNSPTNKLMMYISLAVFFSM 227 (469)
T ss_pred ce-------eehHHHHHHHHHHHHHHHH--HHHHHHhcchHHHHHHhhhHHHHHHhcCCCcCCCcchhHHHHHHHHHHHH
Confidence 99 9999999999999999999 99999999 88899998888 899999877 99999999999999999
Q ss_pred hhcccchhhhhcccccccccchhhhHHHH--------HHHHHHHHHHhhhhhhhhhhhhhhhhhhHHHhhhhcc
Q psy2570 325 FTFPGLRMARMHWDSLKLTESGFDSLRLV--------LIVVLILQRLALMPIYLQAYLNMAYARVEEQRKEAGR 390 (440)
Q Consensus 325 ltFPGLR~A~m~fpgLRlaq~hfDsLRl~--------llv~l~vlrL~~~pi~LQayLnlA~~~vs~~~fEagR 390 (440)
+ | |++||||+|+|+||+|+|.+. ++=...++|..+--.... -.+.+.+..-+|--.|
T Consensus 228 L---g---a~ltFPglR~A~mh~daL~~~~~~~mlq~Llh~sFllP~fil~lw~k---Pi~rd~l~~p~f~~~~ 292 (469)
T KOG3978|consen 228 L---G---AMLTFPGLRCAIMHLDALENDGRIPMLQSLLHVSFLLPAFILALWSK---PIVRDLLQGPRFVETR 292 (469)
T ss_pred H---H---HHhhCCchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhcCCccccee
Confidence 8 7 999999999999999999874 344445555554433222 3344444444444433
No 4
>PF10268 Tmemb_161AB: Predicted transmembrane protein 161AB; InterPro: IPR019395 This entry represents a family of conserved eukaryotic proteins. Members are putative transmembrane proteins but otherwise the function is not known.
Probab=99.68 E-value=4.7e-17 Score=171.02 Aligned_cols=153 Identities=20% Similarity=0.357 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCcccceeeeehhHHHHHHHHHHHHHhhhccccchhhhhhhhhhhhccCCCcCc
Q psy2570 170 MLWCLVVQCFTLKILFTLTLEYFKGEESVGERSTVIVTGFAYLVIAMMILIVDEAKLETPLTILFTLTLEYFKGEESVGE 249 (440)
Q Consensus 170 ~~W~ll~~~F~lkvl~~lt~~Yf~~~~~~gErs~~i~~~~~~~~~~~~~~~~~~~~~~~~lK~l~slt~~YF~~eeg~GE 249 (440)
--|++....++ -+++.+|+.|+...++..|.|++++||+ |+++|+ +|+++|||++||+ +|
T Consensus 103 y~WLvdFav~~-~~Vyl~tE~y~~~~~~~~e~Nisv~w~l--L~v~F~------------lk~L~sLt~~yf~-----s~ 162 (486)
T PF10268_consen 103 YQWLVDFAVYA-LVVYLFTEVYYFFVPPSTEFNISVVWCL--LVVFFA------------LKVLFSLTRLYFS-----SE 162 (486)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhccCCcccchHHHHHHH--HHHHHH------------HHHHHHHHHHHHh-----cC
Confidence 45888766665 5778889999999888899999999987 888888 9999999999998 44
Q ss_pred cchhhhhhHHHHHHHHHHHHhhcceeeeccchhhhccc--hhHHHHhhhcC--CCCCCCCch-hHHHHHHHHHHHHHhhh
Q psy2570 250 RSTVIVTGFAYLVIAMMILIVDEAKLETGLHSAYASFN--ESAATFLHNQG--LNSEGPASK-IIINFCIAIWCALIGAL 324 (440)
Q Consensus 250 RS~~ivfgf~~ll~Am~~Liva~~vLevgL~e~ylefg--~~~a~f~~~~~--L~~qg~~S~-~~~kl~la~~~a~igal 324 (440)
-+ -=-.+|+.+|+++++++|.++.+ +|+++||| .+++++.+|.. +++||++++ +..|+.+++.+|++|++
T Consensus 163 ~~---gErs~~l~~gf~~fl~am~vliv--~e~~lefgLe~ay~s~~~~~~~fl~~qg~~~~~p~skl~l~l~LAv~~~~ 237 (486)
T PF10268_consen 163 EG---GERSVCLAFGFFFFLLAMFVLIV--DERILEFGLEPAYASLSQNAAQFLEQQGLDSSGPLSKLMLKLFLAVLCGL 237 (486)
T ss_pred CC---cceehhHHHHHHHHHHHHHHhhc--ccceeeeccHHHHHHHHHHHHHHHHhcCCCccCcchHHHHHHHHHHHHHH
Confidence 44 13379999999999999999999 99999999 55677777777 899999888 88999999999999998
Q ss_pred hhcccchhhhhcccccccccchhhhHHHH
Q psy2570 325 FTFPGLRMARMHWDSLKLTESGFDSLRLV 353 (440)
Q Consensus 325 ltFPGLR~A~m~fpgLRlaq~hfDsLRl~ 353 (440)
+ | |.++|||+|+|+||+|++|+.
T Consensus 238 l---g---a~L~FPglR~Arm~~dal~~~ 260 (486)
T PF10268_consen 238 L---G---AFLTFPGLRLARMHWDALKMA 260 (486)
T ss_pred H---H---HHHhcchHHHHHHHHHHHhhc
Confidence 8 7 999999999999999999984
No 5
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=30.33 E-value=48 Score=30.40 Aligned_cols=32 Identities=25% Similarity=0.436 Sum_probs=26.0
Q ss_pred hhhhccCCCcCccchhhhhhHHHHHHHHHHHH
Q psy2570 238 LEYFKGEESVGERSTVIVTGFAYLVIAMMILI 269 (440)
Q Consensus 238 ~~YF~~eeg~GERS~~ivfgf~~ll~Am~~Li 269 (440)
.=||+.|++..=.-..++.+|+|++++|++|.
T Consensus 24 lW~fR~ED~tpWNysiL~Ls~vvlvi~~~LLg 55 (125)
T PF15048_consen 24 LWFFRVEDATPWNYSILALSFVVLVISFFLLG 55 (125)
T ss_pred HHheecCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 34799999877776778888899999888876
No 6
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=27.71 E-value=3.9e+02 Score=26.40 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=13.2
Q ss_pred HHHhhhHHHhHHHHhhhh
Q psy2570 409 WVYLNMAYARVEEQRKEA 426 (440)
Q Consensus 409 QaYLnlA~~rve~lkkEA 426 (440)
|.-|+++++.+|+-|.|.
T Consensus 118 ~~~~~~~~~~~~~~~~~~ 135 (197)
T PRK12585 118 KKSLIIRQEQIEKARQER 135 (197)
T ss_pred cchhhccHHHHHHHHHhH
Confidence 677788888887776654
No 7
>KOG3031|consensus
Probab=27.14 E-value=56 Score=33.88 Aligned_cols=53 Identities=25% Similarity=0.304 Sum_probs=33.6
Q ss_pred eeeeeCCCHHHHHhhhCCCCcccccccCccccccccCCCCCccCCCcceeeecc--cccccce
Q psy2570 58 LIRYLYPTNDELRTLAGVPKERSKSKRNSKEKKYERNGSGDQFSQSKETFHVPK--NINLELQ 118 (440)
Q Consensus 58 L~ry~~Pt~~eLr~lag~~k~k~k~K~~~k~r~~~~ng~~~~~~~~~~~f~vPr--~~~i~L~ 118 (440)
+.|-.+|+||-.++.-++||..+++|| | |=..|-+....-..|+++ --+||+.
T Consensus 223 irR~~~asddL~k~A~k~PK~l~~K~k-----K---Nv~~D~~g~k~GriHm~kQdl~~iqtr 277 (307)
T KOG3031|consen 223 IRRTKLASDDLYKEALKKPKQLEKKKK-----K---NVSKDAFGNKLGRIHMGKQDLGDIQTR 277 (307)
T ss_pred EEeccCCCHHHHHHHhcCchhcccccc-----c---ccchhhhcCcceeEecChhhhhhHHHH
Confidence 578889999999999999886544443 1 433233323344788887 2345553
No 8
>PF07960 CBP4: CBP4; InterPro: IPR012420 The CBP4 gene in Saccharomyces cerevisiae is essential for the expression and activity of ubiquinol-cytochrome c reductase [, ]. This family appears to be fungal specific.
Probab=18.83 E-value=60 Score=29.88 Aligned_cols=17 Identities=35% Similarity=0.561 Sum_probs=14.4
Q ss_pred eeeeeCCCHHHHHhhhC
Q psy2570 58 LIRYLYPTNDELRTLAG 74 (440)
Q Consensus 58 L~ry~~Pt~~eLr~lag 74 (440)
|+.|.-||||||.+--.
T Consensus 25 l~~y~tPTeEeL~~r~s 41 (128)
T PF07960_consen 25 LVKYTTPTEEELFKRYS 41 (128)
T ss_pred HheecCCCHHHHHHhcC
Confidence 89999999999986443
No 9
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=15.68 E-value=1.4e+03 Score=24.59 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhhhcccccccccchhhhHHHH----HHHHHHHHHH-hhhhhhhhhhh-----hhhh
Q psy2570 309 IINFCIAIWCALIGALFTFPGLRMARMHWDSLKLTESGFDSLRLV----LIVVLILQRL-ALMPIYLQAYL-----NMAY 378 (440)
Q Consensus 309 ~~kl~la~~~a~igalltFPGLR~A~m~fpgLRlaq~hfDsLRl~----llv~l~vlrL-~~~pi~LQayL-----nlA~ 378 (440)
..|-++++.+..+-+++++-+-....+...+......-.+...+. +.+.++++.+ ..+.. .|-|. .|+.
T Consensus 146 llKsllKi~~v~~v~~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~liia~~D~~-~qr~~~~k~lkMtK 224 (363)
T COG1377 146 LLKSLLKIVLVGLVAYFVLKNHLSELLSLAGQSPVAALSIFMELLGKLLLAVLLLLLIVAAFDYF-YQRFQYIKKLKMTK 224 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcH
Confidence 455566666666666666666566666666665555444444442 2222222222 22333 34443 6776
Q ss_pred hhhHHHhhhhcchhHHHHHHHhHhhhhh
Q psy2570 379 ARVEEQRKEAGRITNVELQKKGDVLMHG 406 (440)
Q Consensus 379 ~~vs~~~fEagRI~~V~lq~~lr~v~~y 406 (440)
.=+-+.-||+= -+-++-..+|.+++-
T Consensus 225 qEVKdE~K~sE--GdPeVKsr~Rq~~re 250 (363)
T COG1377 225 QEVKDEYKQSE--GDPEVKSRIRQMQRE 250 (363)
T ss_pred HHHHHHHhhcc--CChhhhHHHHHHHHH
Confidence 66666666662 133444455544443
No 10
>cd07687 IgC_TCR_delta Immunoglobulin Constant domain. IgC_TCR_delta: Constant domain of the delta chain of delta/gamma T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. The majority of T cells contain alpha-beta TCRs but a small subset contain gamma-delta TCRs. Alpha-beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma-delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma-delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds.
Probab=15.56 E-value=55 Score=27.84 Aligned_cols=22 Identities=36% Similarity=0.543 Sum_probs=18.3
Q ss_pred ceeeecccccccceeeeeceeee
Q psy2570 105 ETFHVPKNINLELQSAKITSLDV 127 (440)
Q Consensus 105 ~~f~vPr~~~i~L~~~~it~~D~ 127 (440)
++|+ ||+++|+|++.+|.+.|-
T Consensus 15 kdFY-pK~I~i~l~sski~e~~~ 36 (80)
T cd07687 15 KEFY-PKSISINLSSSKIVEEPP 36 (80)
T ss_pred ehhc-ccceEEEecccceeccCC
Confidence 4554 999999999999988874
Done!