Your job contains 1 sequence.
>psy2574
MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS
TILCQPTGGRARLTEDDTGDSMTVRGCALDSGTPTTDTELIRMSHCGGFYFDDSQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2574
(115 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039300 - symbol:RpS27 "Ribosomal protein S27" spe... 379 5.1e-35 1
UNIPROTKB|Q2KHT7 - symbol:RPS27 "40S ribosomal protein S2... 366 1.2e-33 1
UNIPROTKB|E2RLE2 - symbol:RPS27L "40S ribosomal protein S... 366 1.2e-33 1
UNIPROTKB|P42677 - symbol:RPS27 "40S ribosomal protein S2... 366 1.2e-33 1
RGD|621045 - symbol:Rps27 "ribosomal protein S27" species... 366 1.2e-33 1
ZFIN|ZDB-GENE-040426-1735 - symbol:rps27.2 "ribosomal pro... 360 5.2e-33 1
UNIPROTKB|C9JLI6 - symbol:RPS27L "40S ribosomal protein S... 359 6.7e-33 1
UNIPROTKB|Q71UM5 - symbol:RPS27L "40S ribosomal protein S... 359 6.7e-33 1
UNIPROTKB|F2Z5B7 - symbol:RPS27L "Uncharacterized protein... 359 6.7e-33 1
MGI|MGI:1915191 - symbol:Rps27l "ribosomal protein S27-li... 359 6.7e-33 1
RGD|1595396 - symbol:Rps27l "ribosomal protein S27-like" ... 359 6.7e-33 1
UNIPROTKB|Q3T0B7 - symbol:RPS27L "40S ribosomal protein S... 358 8.5e-33 1
UNIPROTKB|J9PAS9 - symbol:RPS27L "40S ribosomal protein S... 358 8.5e-33 1
RGD|2318183 - symbol:Rps27l2 "ribosomal protein S27-like ... 357 1.1e-32 1
ZFIN|ZDB-GENE-050522-549 - symbol:rps27.1 "ribosomal prot... 357 1.1e-32 1
UNIPROTKB|F2Z514 - symbol:RPS27 "40S ribosomal protein S2... 354 2.3e-32 1
UNIPROTKB|E1B7A8 - symbol:E1B7A8 "40S ribosomal protein S... 353 2.9e-32 1
UNIPROTKB|J9NTI9 - symbol:RPS27 "40S ribosomal protein S2... 352 3.7e-32 1
UNIPROTKB|H0YMV8 - symbol:RPS27L "40S ribosomal protein S... 347 1.3e-31 1
ZFIN|ZDB-GENE-060331-65 - symbol:zgc:136826 "zgc:136826" ... 333 3.8e-30 1
WB|WBGene00004496 - symbol:rps-27 species:6239 "Caenorhab... 314 3.9e-28 1
ASPGD|ASPL0000076961 - symbol:AN4777 species:162425 "Emer... 306 2.8e-27 1
POMBASE|SPBC1685.10 - symbol:rps27 "40S ribosomal protein... 298 1.9e-26 1
TAIR|locus:2152773 - symbol:AT5G47930 species:3702 "Arabi... 295 4.0e-26 1
TAIR|locus:2098821 - symbol:RS27A "ribosomal protein S27"... 292 8.4e-26 1
SGD|S000001639 - symbol:RPS27A "Protein component of the ... 291 1.1e-25 1
SGD|S000001063 - symbol:RPS27B "Protein component of the ... 290 1.4e-25 1
GENEDB_PFALCIPARUM|PF13_0045 - symbol:PF13_0045 "40S ribo... 282 9.7e-25 1
UNIPROTKB|Q8IEN2 - symbol:PF13_0045 "40S ribosomal protei... 282 9.7e-25 1
TAIR|locus:2050756 - symbol:AT2G45710 species:3702 "Arabi... 282 9.7e-25 1
DICTYBASE|DDB_G0277635 - symbol:rps27 "40S ribosomal prot... 278 2.6e-24 1
TAIR|locus:4515103291 - symbol:AT3G61111 species:3702 "Ar... 252 1.5e-21 1
RGD|1561538 - symbol:Slfn14 "schlafen family member 14" s... 228 4.3e-19 2
UNIPROTKB|E9PTK7 - symbol:Slfn14 "Protein Slfn14" species... 228 4.3e-19 2
UNIPROTKB|E1C075 - symbol:RPS27L "40S ribosomal protein S... 222 2.2e-18 1
UNIPROTKB|C9J1C5 - symbol:RPS27L "40S ribosomal protein S... 222 2.2e-18 1
UNIPROTKB|E9PT93 - symbol:E9PT93 "Uncharacterized protein... 195 1.1e-14 1
UNIPROTKB|Q5T4L4 - symbol:RPS27 "40S ribosomal protein S2... 186 1.4e-14 1
RGD|1565070 - symbol:LOC500594 "LRRGT00162" species:10116... 181 6.6e-14 1
WB|WBGene00044176 - symbol:C30G7.2 species:6239 "Caenorha... 120 1.4e-07 1
RGD|2320911 - symbol:LOC100361049 "hypothetical protein L... 118 2.3e-07 1
>FB|FBgn0039300 [details] [associations]
symbol:RpS27 "Ribosomal protein S27" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005840 "ribosome"
evidence=IDA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 EMBL:AE014297 GO:GO:0005811
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 CTD:6232 ChiTaRS:RpS27 EMBL:AY118959
RefSeq:NP_001247301.1 RefSeq:NP_651359.1 UniGene:Dm.20253
SMR:Q9VBU9 MINT:MINT-970417 STRING:Q9VBU9
EnsemblMetazoa:FBtr0084868 EnsemblMetazoa:FBtr0304693 GeneID:43039
KEGG:dme:Dmel_CG10423 FlyBase:FBgn0039300 InParanoid:Q9VBU9
OrthoDB:EOG444J30 GenomeRNAi:43039 NextBio:831921 Uniprot:Q9VBU9
Length = 84
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 68/75 (90%), Positives = 72/75 (96%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHP AEEKRKHKLKRLVQHPNSYFMDVKCPGCY+ITTVFSHAQ VV+CAGC+
Sbjct: 1 MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCA 60
Query: 61 TILCQPTGGRARLTE 75
TILCQPTGGRA+LTE
Sbjct: 61 TILCQPTGGRAKLTE 75
>UNIPROTKB|Q2KHT7 [details] [associations]
symbol:RPS27 "40S ribosomal protein S27" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:QEGCSFR
GeneTree:ENSGT00390000013514 HOVERGEN:HBG000252 OrthoDB:EOG4H19XB
EMBL:DQ347615 EMBL:BC112887 IPI:IPI00699146 RefSeq:NP_001091604.1
UniGene:Bt.2191 UniGene:Bt.65582 ProteinModelPortal:Q2KHT7
SMR:Q2KHT7 STRING:Q2KHT7 PRIDE:Q2KHT7 Ensembl:ENSBTAT00000018414
GeneID:615638 KEGG:bta:615638 CTD:6232 InParanoid:Q2KHT7
BindingDB:Q2KHT7 NextBio:20899709 Uniprot:Q2KHT7
Length = 84
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|E2RLE2 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9615
"Canis lupus familiaris" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 KO:K02978
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594 OMA:QEGCSFR
GeneTree:ENSGT00390000013514 CTD:6232 EMBL:AAEX03005351
RefSeq:NP_001239215.1 ProteinModelPortal:E2RLE2
Ensembl:ENSCAFT00000027547 GeneID:612291 KEGG:cfa:612291
Uniprot:E2RLE2
Length = 84
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|P42677 [details] [associations]
symbol:RPS27 "40S ribosomal protein S27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0008283 "cell proliferation" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0006412 "translation"
evidence=IC;NAS;TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0000236
"mitotic prometaphase" evidence=TAS] [GO:0000278 "mitotic cell
cycle" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 GO:GO:0005634
Reactome:REACT_116125 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000184 EMBL:CH471055 GO:GO:0046872 GO:GO:0003677
GO:GO:0006413 GO:GO:0008283 GO:GO:0008270 GO:GO:0003735
EMBL:CH471116 EMBL:CH471121 GO:GO:0000236 EMBL:AL358472
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 SUPFAM:SSF57829 eggNOG:COG2051
KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
OMA:QEGCSFR HOVERGEN:HBG000252 OrthoDB:EOG4H19XB CTD:6232
EMBL:L19739 EMBL:U57847 EMBL:AB061845 EMBL:AK312070 EMBL:BC002658
EMBL:BC070219 EMBL:AB007162 IPI:IPI00397358 PIR:A48045
RefSeq:NP_001021.1 UniGene:Hs.546291 UniGene:Hs.654475
ProteinModelPortal:P42677 SMR:P42677 IntAct:P42677
MINT:MINT-1147961 STRING:P42677 PhosphoSite:P42677 DMDM:1171014
PaxDb:P42677 PRIDE:P42677 DNASU:6232 Ensembl:ENST00000368567
GeneID:6232 KEGG:hsa:6232 UCSC:uc001fdv.3 GeneCards:GC01P153963
H-InvDB:HIX0033569 H-InvDB:HIX0164279 HGNC:HGNC:10416 MIM:603702
neXtProt:NX_P42677 PharmGKB:PA34820 InParanoid:P42677
PhylomeDB:P42677 BindingDB:P42677 ChEMBL:CHEMBL1932893
ChiTaRS:RpS27 GenomeRNAi:6232 NextBio:24193 ArrayExpress:P42677
Bgee:P42677 CleanEx:HS_RPS27 Genevestigator:P42677
GermOnline:ENSG00000130041 GermOnline:ENSG00000177954
Uniprot:P42677
Length = 84
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>RGD|621045 [details] [associations]
symbol:Rps27 "ribosomal protein S27" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 RGD:621045 GO:GO:0005634 GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 SUPFAM:SSF57829
eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 GeneTree:ENSGT00390000013514 HOVERGEN:HBG000252
GermOnline:ENSRNOG00000016961 CTD:6232 EMBL:AF184893 EMBL:BC061539
IPI:IPI00422085 RefSeq:NP_446049.1 UniGene:Rn.144623
UniGene:Rn.153914 ProteinModelPortal:Q71TY3 SMR:Q71TY3
IntAct:Q71TY3 STRING:Q71TY3 PhosphoSite:Q71TY3 PRIDE:Q71TY3
Ensembl:ENSRNOT00000022897 GeneID:94266 KEGG:rno:94266
UCSC:RGD:621045 InParanoid:Q71TY3 BindingDB:Q71TY3 NextBio:617887
ArrayExpress:Q71TY3 Genevestigator:Q71TY3 Uniprot:Q71TY3
Length = 84
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>ZFIN|ZDB-GENE-040426-1735 [details] [associations]
symbol:rps27.2 "ribosomal protein S27, isoform 2"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 ZFIN:ZDB-GENE-040426-1735 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 HOVERGEN:HBG000252 OrthoDB:EOG4H19XB
EMBL:BX004983 EMBL:BC059595 IPI:IPI00496824 RefSeq:NP_957059.1
UniGene:Dr.78175 STRING:Q6PBT1 Ensembl:ENSDART00000077834
GeneID:393738 KEGG:dre:393738 CTD:393738 InParanoid:Q6PBT1
NextBio:20814739 Uniprot:Q6PBT1
Length = 84
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHP+ EEKR+HK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPTPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|C9JLI6 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 HOGENOM:HOG000224977
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
HGNC:HGNC:18476 ChiTaRS:RPS27L EMBL:AC087612 IPI:IPI00420117
ProteinModelPortal:C9JLI6 SMR:C9JLI6 STRING:C9JLI6 PRIDE:C9JLI6
Ensembl:ENST00000439025 ArrayExpress:C9JLI6 Bgee:C9JLI6
Uniprot:C9JLI6
Length = 97
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|Q71UM5 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27-like" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0031571 "mitotic G1 DNA
damage checkpoint" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
[GO:0008494 "translation activator activity" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0005634 GO:GO:0042771 GO:GO:0046872
GO:GO:0006412 GO:GO:0006281 GO:GO:0005840 GO:GO:0008494
GO:GO:0003735 GO:GO:0008656 GO:GO:0031571 SUPFAM:SSF57829
eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 OMA:AQTVVVC CTD:51065 HOVERGEN:HBG000252
OrthoDB:EOG4H19XB EMBL:AF070668 EMBL:BC003667 IPI:IPI00746004
RefSeq:NP_057004.1 UniGene:Hs.108957 ProteinModelPortal:Q71UM5
SMR:Q71UM5 IntAct:Q71UM5 MINT:MINT-1158751 STRING:Q71UM5
PhosphoSite:Q71UM5 DMDM:51316258 PaxDb:Q71UM5 PRIDE:Q71UM5
DNASU:51065 Ensembl:ENST00000330964 GeneID:51065 KEGG:hsa:51065
UCSC:uc002aly.3 GeneCards:GC15M063445 HGNC:HGNC:18476 MIM:612055
neXtProt:NX_Q71UM5 PharmGKB:PA38546 ChiTaRS:RPS27L GenomeRNAi:51065
NextBio:53659 ArrayExpress:Q71UM5 Bgee:Q71UM5 CleanEx:HS_RPS27L
Genevestigator:Q71UM5 GermOnline:ENSG00000185088 Uniprot:Q71UM5
Length = 84
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|F2Z5B7 [details] [associations]
symbol:RPS27L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0031571 "mitotic G1 DNA damage checkpoint" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0008494
"translation activator activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0005634 GO:GO:0042771
GO:GO:0006412 GO:GO:0006281 GO:GO:0005840 GO:GO:0008494
GO:GO:0003735 GO:GO:0008656 GO:GO:0031571 SUPFAM:SSF57829 KO:K02978
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 EMBL:CU606936 RefSeq:XP_003480386.1
RefSeq:XP_003480387.1 RefSeq:XP_003480388.1 RefSeq:XP_003480389.1
ProteinModelPortal:F2Z5B7 SMR:F2Z5B7 PRIDE:F2Z5B7
Ensembl:ENSSSCT00000027612 GeneID:100738416 KEGG:ssc:100738416
Uniprot:F2Z5B7
Length = 84
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>MGI|MGI:1915191 [details] [associations]
symbol:Rps27l "ribosomal protein S27-like" species:10090
"Mus musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006412 "translation"
evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008494 "translation activator activity" evidence=ISO]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031571 "mitotic G1
DNA damage checkpoint" evidence=ISO] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISO] [GO:0045727 "positive regulation of
translation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 MGI:MGI:1915191 GO:GO:0005634
GO:GO:0042771 GO:GO:0046872 GO:GO:0006412 GO:GO:0006281
GO:GO:0005840 GO:GO:0008494 GO:GO:0003735 GO:GO:0008656
GO:GO:0031571 SUPFAM:SSF57829 eggNOG:COG2051 KO:K02978
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
GeneTree:ENSGT00390000013514 CTD:51065 HOVERGEN:HBG000252
OrthoDB:EOG4H19XB EMBL:AK007689 EMBL:AK011262 EMBL:AK151083
EMBL:BC058115 IPI:IPI00124709 RefSeq:NP_080743.1 UniGene:Mm.30120
ProteinModelPortal:Q6ZWY3 SMR:Q6ZWY3 IntAct:Q6ZWY3 STRING:Q6ZWY3
PhosphoSite:Q6ZWY3 PaxDb:Q6ZWY3 PRIDE:Q6ZWY3
Ensembl:ENSMUST00000040917 GeneID:67941 KEGG:mmu:67941
UCSC:uc009qfm.1 InParanoid:Q6ZWY3 NextBio:326022 Bgee:Q6ZWY3
CleanEx:MM_RPS27L Genevestigator:Q6ZWY3
GermOnline:ENSMUSG00000036781 Uniprot:Q6ZWY3
Length = 84
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>RGD|1595396 [details] [associations]
symbol:Rps27l "ribosomal protein S27-like" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISO]
[GO:0006412 "translation" evidence=IEA;ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008494 "translation activator
activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0031571 "mitotic G1 DNA damage checkpoint"
evidence=IEA;ISO] [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA;ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 RGD:1595396 GO:GO:0005634 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 CTD:51065 HOVERGEN:HBG000252 OrthoDB:EOG4H19XB
EMBL:X59375 IPI:IPI00210965 PIR:S30297 RefSeq:XP_001056747.3
RefSeq:XP_003750584.1 UniGene:Rn.34330 ProteinModelPortal:P24051
SMR:P24051 STRING:P24051 PRIDE:P24051 GeneID:681429 KEGG:rno:681429
InParanoid:P24051 NextBio:720917 ArrayExpress:P24051
Genevestigator:P24051 GermOnline:ENSRNOG00000016961 Uniprot:P24051
Length = 84
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|Q3T0B7 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27-like" species:9913
"Bos taurus" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 eggNOG:COG2051
HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 EMBL:BC102463 IPI:IPI00709371
RefSeq:NP_001035668.1 UniGene:Bt.87800 ProteinModelPortal:Q3T0B7
MINT:MINT-6732988 STRING:Q3T0B7 PRIDE:Q3T0B7
Ensembl:ENSBTAT00000017146 Ensembl:ENSBTAT00000057552 GeneID:614220
KEGG:bta:614220 CTD:51065 HOVERGEN:HBG000252 InParanoid:Q3T0B7
OrthoDB:EOG4H19XB NextBio:20899003 Uniprot:Q3T0B7
Length = 84
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLARDLLHPSLDEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|J9PAS9 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9615
"Canis lupus familiaris" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 EMBL:AAEX03014790
Ensembl:ENSCAFT00000037564 Uniprot:J9PAS9
Length = 84
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 65/75 (86%), Positives = 69/75 (92%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDL HPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLPHPSLEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>RGD|2318183 [details] [associations]
symbol:Rps27l2 "ribosomal protein S27-like 2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 RGD:2318183
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 GeneTree:ENSGT00390000013514 OrthoDB:EOG4H19XB
IPI:IPI00951082 RefSeq:XP_002724859.1 RefSeq:XP_002728008.1
UniGene:Rn.131385 Ensembl:ENSRNOT00000067366 GeneID:100362405
KEGG:rno:100362405 UCSC:RGD:2318183 CTD:100362405 Uniprot:D3ZNZ8
Length = 84
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK K LVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKHLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ RLTE
Sbjct: 61 TVLCQPTGGKVRLTE 75
>ZFIN|ZDB-GENE-050522-549 [details] [associations]
symbol:rps27.1 "ribosomal protein S27, isoform 1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 ZFIN:ZDB-GENE-050522-549 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:QEGCSFR
GeneTree:ENSGT00390000013514 HOVERGEN:HBG000252 OrthoDB:EOG4H19XB
EMBL:CR450791 EMBL:CU468271 EMBL:BC095031 EMBL:BC165475
IPI:IPI00614363 RefSeq:NP_001153000.1 UniGene:Dr.47556
STRING:Q4VBV2 Ensembl:ENSDART00000031173 GeneID:554155
KEGG:dre:554155 CTD:554155 InParanoid:Q4VBV2 NextBio:20880713
Uniprot:Q4VBV2
Length = 84
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 63/75 (84%), Positives = 70/75 (93%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHP+ EE+R+HK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPTPEEERRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|F2Z514 [details] [associations]
symbol:RPS27 "40S ribosomal protein S27" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 OMA:QEGCSFR GeneTree:ENSGT00390000013514
EMBL:CU407290 ProteinModelPortal:F2Z514 Ensembl:ENSSSCT00000007185
Uniprot:F2Z514
Length = 82
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 64/73 (87%), Positives = 68/73 (93%)
Query: 3 LAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTI 62
LAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCST+
Sbjct: 1 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 60
Query: 63 LCQPTGGRARLTE 75
LCQPTGG+ARLTE
Sbjct: 61 LCQPTGGKARLTE 73
>UNIPROTKB|E1B7A8 [details] [associations]
symbol:E1B7A8 "40S ribosomal protein S27" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 GeneTree:ENSGT00390000013514 EMBL:DAAA02016836
IPI:IPI00904084 Ensembl:ENSBTAT00000000975 OMA:VSSHAQT
Uniprot:E1B7A8
Length = 84
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 64/75 (85%), Positives = 69/75 (92%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNS FMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSDFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLT+
Sbjct: 61 TVLCQPTGGKARLTD 75
>UNIPROTKB|J9NTI9 [details] [associations]
symbol:RPS27 "40S ribosomal protein S27" species:9615
"Canis lupus familiaris" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
OMA:ARDLVHP Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
GeneTree:ENSGT00390000013514 EMBL:AAEX03026295
Ensembl:ENSCAFT00000019434 Uniprot:J9NTI9
Length = 84
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 64/75 (85%), Positives = 69/75 (92%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKC GCYKITTVFSHA++VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCLGCYKITTVFSHAKTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>UNIPROTKB|H0YMV8 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 HGNC:HGNC:18476 ChiTaRS:RPS27L
EMBL:AC087612 ProteinModelPortal:H0YMV8 SMR:H0YMV8 PRIDE:H0YMV8
Ensembl:ENST00000462430 PhylomeDB:H0YMV8 Bgee:H0YMV8 Uniprot:H0YMV8
Length = 100
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 62/73 (84%), Positives = 68/73 (93%)
Query: 3 LAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTI 62
LA+DLLHPS EEK+KHK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCST+
Sbjct: 19 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 78
Query: 63 LCQPTGGRARLTE 75
LCQPTGG+ARLTE
Sbjct: 79 LCQPTGGKARLTE 91
>ZFIN|ZDB-GENE-060331-65 [details] [associations]
symbol:zgc:136826 "zgc:136826" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
ZFIN:ZDB-GENE-060331-65 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 HOGENOM:HOG000224977
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
HOVERGEN:HBG000252 EMBL:BC114281 IPI:IPI00759097
RefSeq:NP_001166151.1 UniGene:Dr.78145 ProteinModelPortal:Q24JV7
PRIDE:Q24JV7 GeneID:677743 KEGG:dre:677743 NextBio:20902356
ArrayExpress:Q24JV7 Bgee:Q24JV7 Uniprot:Q24JV7
Length = 84
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 59/75 (78%), Positives = 69/75 (92%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPL++DL++PS E+R+HK KRLVQ PNSYFMDVKCPGCYKITTVFSHAQ+VV+C GCS
Sbjct: 1 MPLSRDLINPSFDLERRQHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>WB|WBGene00004496 [details] [associations]
symbol:rps-27 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0046872 GO:GO:0006412
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
GeneTree:ENSGT00390000013514 EMBL:FO081492 PIR:G88921
RefSeq:NP_503134.1 ProteinModelPortal:Q9TXP0 SMR:Q9TXP0
STRING:Q9TXP0 PaxDb:Q9TXP0 EnsemblMetazoa:F56E10.4.1
EnsemblMetazoa:F56E10.4.2 EnsemblMetazoa:F56E10.4.3
EnsemblMetazoa:F56E10.4.4 EnsemblMetazoa:F56E10.4.5 GeneID:178538
KEGG:cel:CELE_F56E10.4 UCSC:F56E10.4.1 CTD:178538 WormBase:F56E10.4
InParanoid:Q9TXP0 NextBio:901542 Uniprot:Q9TXP0
Length = 83
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 56/75 (74%), Positives = 64/75 (85%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
MPLA DLLHP E R HKLKRLVQHPNSYFMDVKC GC+KI+TVFSHA +VV+C GC+
Sbjct: 1 MPLAVDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCN 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPT G+A+LTE
Sbjct: 61 TVLCQPTRGKAKLTE 75
>ASPGD|ASPL0000076961 [details] [associations]
symbol:AN4777 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000479 "endonucleolytic cleavage of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 EMBL:AACD01000081 SUPFAM:SSF57829
eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC OrthoDB:EOG4R274Q
RefSeq:XP_662381.1 ProteinModelPortal:Q5B3V3 STRING:Q5B3V3
EnsemblFungi:CADANIAT00005645 GeneID:2872578 KEGG:ani:AN4777.2
Uniprot:Q5B3V3
Length = 82
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 55/75 (73%), Positives = 65/75 (86%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
M LA DLL+P+ E RKHKLK+LV P S+FMDVKCPGC+ ITTVFSHAQ+VV+C+GCS
Sbjct: 1 MVLAVDLLNPTPQAEARKHKLKQLVPGPRSFFMDVKCPGCFNITTVFSHAQTVVVCSGCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LCQPTGG+ARLTE
Sbjct: 61 TVLCQPTGGKARLTE 75
>POMBASE|SPBC1685.10 [details] [associations]
symbol:rps27 "40S ribosomal protein S27 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 PomBase:SPBC1685.10 GO:GO:0046872
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0022627 SUPFAM:SSF57829 eggNOG:COG2051
HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC OrthoDB:EOG4R274Q
EMBL:AF045155 EMBL:AB015171 PIR:T39526 PIR:T43368 PIR:T43625
RefSeq:NP_595214.1 ProteinModelPortal:O74330 STRING:O74330
PRIDE:O74330 EnsemblFungi:SPBC1685.10.1 GeneID:2539969
KEGG:spo:SPBC1685.10 NextBio:20801112 Uniprot:O74330
Length = 83
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
M LA DLL+PS E RKHKLK+LVQ P S+FMDVKCPGC+ ITTVFSHAQ+VVIC C+
Sbjct: 1 MVLAVDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCA 60
Query: 61 TILCQPTGGRARLTE 75
++LCQPTGG+ARL E
Sbjct: 61 SVLCQPTGGKARLME 75
>TAIR|locus:2152773 [details] [associations]
symbol:AT5G47930 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 UniGene:At.22974 GO:GO:0022627
SUPFAM:SSF57829 EMBL:AB024025 HOGENOM:HOG000224977 KO:K02978
ProtClustDB:PLN00209 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 EMBL:AY046032 EMBL:AY079419 EMBL:AY088632
IPI:IPI00544335 RefSeq:NP_199604.1 UniGene:At.7906
ProteinModelPortal:Q8L953 SMR:Q8L953 STRING:Q8L953 PRIDE:Q8L953
EnsemblPlants:AT5G47930.1 GeneID:834844 KEGG:ath:AT5G47930
GeneFarm:5052 TAIR:At5g47930 InParanoid:Q8L953 OMA:QEGCSFR
PhylomeDB:Q8L953 Genevestigator:Q8L953 GermOnline:AT5G47930
Uniprot:Q8L953
Length = 84
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 52/70 (74%), Positives = 59/70 (84%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLLHP EKRKHKLKRLVQ PNS+FMDVKC GC+ ITTVFSH+Q+VV+C C T+LCQ
Sbjct: 8 DLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQ 67
Query: 66 PTGGRARLTE 75
PTGG+ARL E
Sbjct: 68 PTGGKARLQE 77
>TAIR|locus:2098821 [details] [associations]
symbol:RS27A "ribosomal protein S27" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0009506 GO:GO:0005618 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0006412 EMBL:AL137898
GO:GO:0003735 GO:GO:0022627 EMBL:AL358732 SUPFAM:SSF57829
eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978 ProtClustDB:PLN00209
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
EMBL:AF083336 EMBL:AF083337 EMBL:AF412053 EMBL:AY090259
IPI:IPI00539882 PIR:T47903 PIR:T50532 RefSeq:NP_191670.1
UniGene:At.23829 ProteinModelPortal:Q9M2F1 SMR:Q9M2F1 STRING:Q9M2F1
PaxDb:Q9M2F1 EnsemblPlants:AT3G61110.1 GeneID:825283
KEGG:ath:AT3G61110 GeneFarm:5051 TAIR:At3g61110 InParanoid:Q9M2F1
OMA:AQTVVVC PhylomeDB:Q9M2F1 Genevestigator:Q9M2F1
GermOnline:AT3G61110 Uniprot:Q9M2F1
Length = 86
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 52/70 (74%), Positives = 60/70 (85%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL+P EKRKHKLKRLVQ PNS+FMDVKC GC+ ITTVFSH+Q+VV+C C TILCQ
Sbjct: 8 DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQ 67
Query: 66 PTGGRARLTE 75
PTGG+A+LTE
Sbjct: 68 PTGGKAKLTE 77
>SGD|S000001639 [details] [associations]
symbol:RPS27A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0000028 "ribosomal small subunit assembly" evidence=IMP]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
SGD:S000001639 GO:GO:0046872 EMBL:BK006944 GO:GO:0003735
GO:GO:0002181 EMBL:Z26877 GO:GO:0000028 GO:GO:0000462 GO:GO:0022627
PDB:3IZB PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3U5C PDBsum:3U5G
SUPFAM:SSF57829 KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 OMA:QEGCSFR GeneTree:ENSGT00390000013514
OrthoDB:EOG4R274Q EMBL:Z28156 EMBL:Z28155 PIR:S37986
RefSeq:NP_012766.1 ProteinModelPortal:P35997 SMR:P35997
IntAct:P35997 MINT:MINT-1325338 STRING:P35997 EnsemblFungi:YKL156W
GeneID:853700 KEGG:sce:YKL156W CYGD:YKL156w NextBio:974690
Genevestigator:P35997 GermOnline:YKL156W Uniprot:P35997
Length = 82
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
M L +DLLHP+ A E RKHKLK LVQ P SYF+DVKCPGC ITTVFSHAQ+ V C CS
Sbjct: 1 MVLVQDLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCS 60
Query: 61 TILCQPTGGRARLTE 75
TILC PTGG+A+L+E
Sbjct: 61 TILCTPTGGKAKLSE 75
>SGD|S000001063 [details] [associations]
symbol:RPS27B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IC]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0000479 "endonucleolytic
cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 SGD:S000001063
GO:GO:0046872 EMBL:BK006934 GO:GO:0003735 GO:GO:0002181
GO:GO:0000028 EMBL:U10399 GO:GO:0000462 GO:GO:0022627
SUPFAM:SSF57829 eggNOG:COG2051 HOGENOM:HOG000224977 KO:K02978
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
PIR:S46776 RefSeq:NP_011885.1 ProteinModelPortal:P38711 SMR:P38711
IntAct:P38711 STRING:P38711 PaxDb:P38711 PeptideAtlas:P38711
EnsemblFungi:YHR021C GeneID:856415 KEGG:sce:YHR021C CYGD:YHR021c
GeneTree:ENSGT00390000013514 OrthoDB:EOG4R274Q NextBio:981973
Genevestigator:P38711 GermOnline:YHR021C GO:GO:0000479
Uniprot:P38711
Length = 82
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
M L +DLLHP+ A E RKHKLK LVQ P SYF+DVKCPGC ITTVFSHAQ+ V C CS
Sbjct: 1 MVLVQDLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCS 60
Query: 61 TILCQPTGGRARLTE 75
T+LC PTGG+A+L+E
Sbjct: 61 TVLCTPTGGKAKLSE 75
>GENEDB_PFALCIPARUM|PF13_0045 [details] [associations]
symbol:PF13_0045 "40S ribosomal protein S27,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
GO:GO:0006412 GO:GO:0003735 EMBL:AL844509 GO:GO:0022627
SUPFAM:SSF57829 HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
ProtClustDB:PTZ00083 RefSeq:XP_001349810.1 HSSP:O28935
ProteinModelPortal:Q8IEN2 MINT:MINT-1546244 PRIDE:Q8IEN2
EnsemblProtists:PF13_0045:mRNA GeneID:814024 KEGG:pfa:PF13_0045
EuPathDB:PlasmoDB:PF3D7_1308300 Uniprot:Q8IEN2
Length = 82
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL+P EE +KHKLKRL+ PNSYFMDVKCPGC +ITT+FSHAQ+VV+C C+ +LCQ
Sbjct: 4 DLLNPDPVEESKKHKLKRLIPTPNSYFMDVKCPGCLQITTLFSHAQNVVLCGSCNIMLCQ 63
Query: 66 PTGGRARLTE 75
PTGG+ +LTE
Sbjct: 64 PTGGKCKLTE 73
>UNIPROTKB|Q8IEN2 [details] [associations]
symbol:PF13_0045 "40S ribosomal protein S27, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 GO:GO:0006412
GO:GO:0003735 EMBL:AL844509 GO:GO:0022627 SUPFAM:SSF57829
HOGENOM:HOG000224977 KO:K02978 Gene3D:2.20.25.100
InterPro:IPR023407 PANTHER:PTHR11594 OMA:AQTVVVC
ProtClustDB:PTZ00083 RefSeq:XP_001349810.1 HSSP:O28935
ProteinModelPortal:Q8IEN2 MINT:MINT-1546244 PRIDE:Q8IEN2
EnsemblProtists:PF13_0045:mRNA GeneID:814024 KEGG:pfa:PF13_0045
EuPathDB:PlasmoDB:PF3D7_1308300 Uniprot:Q8IEN2
Length = 82
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL+P EE +KHKLKRL+ PNSYFMDVKCPGC +ITT+FSHAQ+VV+C C+ +LCQ
Sbjct: 4 DLLNPDPVEESKKHKLKRLIPTPNSYFMDVKCPGCLQITTLFSHAQNVVLCGSCNIMLCQ 63
Query: 66 PTGGRARLTE 75
PTGG+ +LTE
Sbjct: 64 PTGGKCKLTE 73
>TAIR|locus:2050756 [details] [associations]
symbol:AT2G45710 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0005886 GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 EMBL:AC003680 EMBL:AC004665
GO:GO:0022627 SUPFAM:SSF57829 EMBL:AY072376 EMBL:BT000089
EMBL:AY085824 IPI:IPI00522947 PIR:T00884 RefSeq:NP_182095.1
UniGene:At.36603 ProteinModelPortal:O64650 SMR:O64650 STRING:O64650
PRIDE:O64650 EnsemblPlants:AT2G45710.1 GeneID:819179
KEGG:ath:AT2G45710 GeneFarm:5050 TAIR:At2g45710 eggNOG:COG2051
HOGENOM:HOG000224977 InParanoid:O64650 KO:K02978 OMA:ARDLVHP
PhylomeDB:O64650 ProtClustDB:PLN00209 Genevestigator:O64650
GermOnline:AT2G45710 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 Uniprot:O64650
Length = 84
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL+P EKRKHKLKRLVQ PNS+FMDVKC GC+ ITTVFSH+Q+VV+C C T+LC
Sbjct: 8 DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCT 67
Query: 66 PTGGRARLTE 75
PTGG+A+LTE
Sbjct: 68 PTGGKAKLTE 77
>DICTYBASE|DDB_G0277635 [details] [associations]
symbol:rps27 "40S ribosomal protein S27"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168
dictyBase:DDB_G0277635 GO:GO:0005615 GO:GO:0046872 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 EMBL:AAFI02000020
GO:GO:0003735 InterPro:IPR005735 TIGRFAMs:TIGR01053 SUPFAM:SSF57829
eggNOG:COG2051 KO:K02978 Gene3D:2.20.25.100 InterPro:IPR023407
PANTHER:PTHR11594 OMA:AQTVVVC RefSeq:XP_642577.1
ProteinModelPortal:Q8T1V4 STRING:Q8T1V4 EnsemblProtists:DDB0231065
GeneID:8621143 KEGG:ddi:DDB_G0277635 ProtClustDB:PTZ00083
Uniprot:Q8T1V4
Length = 85
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 51/69 (73%), Positives = 58/69 (84%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL PS EKRKHKLKRLVQ PNS+FMD+ C GC ITTVFSHAQ+VVIC+ CST++ Q
Sbjct: 7 DLLFPSIESEKRKHKLKRLVQAPNSFFMDINCHGCRTITTVFSHAQNVVICSSCSTVIAQ 66
Query: 66 PTGGRARLT 74
PTGGRAR+T
Sbjct: 67 PTGGRARIT 75
>TAIR|locus:4515103291 [details] [associations]
symbol:AT3G61111 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000592 InterPro:IPR011332
Pfam:PF01667 ProDom:PD004466 PROSITE:PS01168 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
EMBL:AL137898 GO:GO:0003735 SUPFAM:SSF57829 eggNOG:COG2051
HOGENOM:HOG000224977 KO:K02978 ProtClustDB:PLN00209
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
IPI:IPI00891661 RefSeq:NP_001118871.1 UniGene:At.69294
ProteinModelPortal:B3H5X2 SMR:B3H5X2 STRING:B3H5X2
EnsemblPlants:AT3G61111.1 GeneID:6241410 KEGG:ath:AT3G61111
TAIR:At3g61111 OMA:CINITTI PhylomeDB:B3H5X2 Genevestigator:B3H5X2
Uniprot:B3H5X2
Length = 86
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 6 DLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQ 65
DLL+P EKRKHKLKRLV PNSYFM V+C C ITT+FSH+Q+VV+C C +LCQ
Sbjct: 8 DLLNPPAELEKRKHKLKRLVPSPNSYFMLVRCSDCINITTIFSHSQTVVVCGKCQNVLCQ 67
Query: 66 PTGGRARLT 74
PTGG+A+LT
Sbjct: 68 PTGGKAKLT 76
>RGD|1561538 [details] [associations]
symbol:Slfn14 "schlafen family member 14" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000592
InterPro:IPR000721 InterPro:IPR007421 InterPro:IPR008916
InterPro:IPR011332 Pfam:PF00607 Pfam:PF01667 Pfam:PF04326
RGD:1561538 GO:GO:0005524 GO:GO:0016032 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.1200.30 SUPFAM:SSF47353 SUPFAM:SSF57829
eggNOG:COG2051 Gene3D:2.20.25.100 InterPro:IPR023407
HOGENOM:HOG000049135 HOVERGEN:HBG056880 OrthoDB:EOG46DM22
IPI:IPI00421403 EMBL:AY539914 ProteinModelPortal:Q6QI45
PhosphoSite:Q6QI45 InParanoid:Q6QI45 Genevestigator:Q6QI45
Uniprot:Q6QI45
Length = 1247
Score = 228 (85.3 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 44/55 (80%), Positives = 47/55 (85%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVI 55
MPLAKDLLHPS E KRK K KRLVQ PNSYF+DVKC GCYKITT FSHAQ+VV+
Sbjct: 1 MPLAKDLLHPSPEEGKRKPKKKRLVQSPNSYFLDVKCTGCYKITTDFSHAQTVVL 55
Score = 42 (19.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 49 HAQSVVICAGCSTILCQPTGGRARLTEDDTGDSMTVRGCALDSGT 93
H S ++ A C+ L GG + DD G S G D T
Sbjct: 133 HENSSIVQAVCA--LLNSGGGVIKAKIDDKGYSYRCHGLGQDLET 175
>UNIPROTKB|E9PTK7 [details] [associations]
symbol:Slfn14 "Protein Slfn14" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016032 "viral reproduction" evidence=IEA] InterPro:IPR000592
InterPro:IPR000721 InterPro:IPR007421 InterPro:IPR008916
InterPro:IPR011332 Pfam:PF00607 Pfam:PF01667 Pfam:PF04326
RGD:1561538 GO:GO:0005524 GO:GO:0016032 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.1200.30 SUPFAM:SSF47353 SUPFAM:SSF57829
Gene3D:2.20.25.100 InterPro:IPR023407 GeneTree:ENSGT00410000025651
EMBL:AC118772 IPI:IPI00421403 Ensembl:ENSRNOT00000012874
OMA:AISHELE Uniprot:E9PTK7
Length = 1247
Score = 228 (85.3 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 44/55 (80%), Positives = 47/55 (85%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVI 55
MPLAKDLLHPS E KRK K KRLVQ PNSYF+DVKC GCYKITT FSHAQ+VV+
Sbjct: 1 MPLAKDLLHPSPEEGKRKPKKKRLVQSPNSYFLDVKCTGCYKITTDFSHAQTVVL 55
Score = 42 (19.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 49 HAQSVVICAGCSTILCQPTGGRARLTEDDTGDSMTVRGCALDSGT 93
H S ++ A C+ L GG + DD G S G D T
Sbjct: 133 HENSSIVQAVCA--LLNSGGGVIKAKIDDKGYSYRCHGLGQDLET 175
>UNIPROTKB|E1C075 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667 ProDom:PD004466
PROSITE:PS01168 GO:GO:0005634 GO:GO:0042771 GO:GO:0046872
GO:GO:0006412 GO:GO:0006281 GO:GO:0005840 GO:GO:0008494
GO:GO:0003735 GO:GO:0008656 GO:GO:0031571 SUPFAM:SSF57829
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
GeneTree:ENSGT00390000013514 EMBL:AADN02076710 IPI:IPI00584948
Ensembl:ENSGALT00000005528 Uniprot:E1C075
Length = 43
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Query: 33 MDVKCPGCYKITTVFSHAQSVVICAGCSTILCQPTGGRARLTE 75
MDVKCPGCYKITTVFSHAQ+VV+C GCST+LCQPTGG+ARLTE
Sbjct: 1 MDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTE 43
>UNIPROTKB|C9J1C5 [details] [associations]
symbol:RPS27L "40S ribosomal protein S27" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000592 InterPro:IPR011332 Pfam:PF01667
ProDom:PD004466 PROSITE:PS01168 GO:GO:0046872 GO:GO:0006412
GO:GO:0003735 EMBL:CH471082 GO:GO:0022627 SUPFAM:SSF57829
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
OrthoDB:EOG4H19XB UniGene:Hs.108957 HGNC:HGNC:18476 ChiTaRS:RPS27L
EMBL:AC087612 IPI:IPI00795224 SMR:C9J1C5 STRING:C9J1C5
Ensembl:ENST00000411926 Ensembl:ENST00000455271
HOGENOM:HOG000073531 Uniprot:C9J1C5
Length = 52
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Query: 33 MDVKCPGCYKITTVFSHAQSVVICAGCSTILCQPTGGRARLTE 75
MDVKCPGCYKITTVFSHAQ+VV+C GCST+LCQPTGG+ARLTE
Sbjct: 1 MDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTE 43
>UNIPROTKB|E9PT93 [details] [associations]
symbol:E9PT93 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000592
InterPro:IPR011332 Pfam:PF01667 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR004244 PANTHER:PTHR11505 Pfam:PF02994
SUPFAM:SSF57829 Gene3D:2.20.25.100 InterPro:IPR023407
InterPro:IPR013544 Pfam:PF08333 IPI:IPI01007578
Ensembl:ENSRNOT00000004464 Uniprot:E9PT93
Length = 497
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 12 QAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCSTILCQPT 67
+ EEKRKHK K LVQ P+SYFMDVK GCYK+ +FS +VV+ GCST+ CQPT
Sbjct: 199 EEEEKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UNIPROTKB|Q5T4L4 [details] [associations]
symbol:RPS27 "40S ribosomal protein S27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000592 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL358472 PANTHER:PTHR11594
UniGene:Hs.546291 UniGene:Hs.654475 HGNC:HGNC:10416 ChiTaRS:RpS27
IPI:IPI00514399 SMR:Q5T4L4 MINT:MINT-1415609 STRING:Q5T4L4
Ensembl:ENST00000392558 Uniprot:Q5T4L4
Length = 66
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 35/39 (89%), Positives = 35/39 (89%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPG 39
MPLAKDLLHPS EEKRKHK KRLVQ PNSYFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>RGD|1565070 [details] [associations]
symbol:LOC500594 "LRRGT00162" species:10116 "Rattus norvegicus"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000592 Pfam:PF01667 RGD:1565070
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH473968
InterPro:IPR008996 SUPFAM:SSF50353 eggNOG:COG2051
Gene3D:2.20.25.100 InterPro:IPR023407 PANTHER:PTHR11594
GeneTree:ENSGT00390000013514 EMBL:AY539913 IPI:IPI00421404
RefSeq:NP_001041423.1 UniGene:Rn.154970 Ensembl:ENSRNOT00000031564
GeneID:500594 KEGG:rno:500594 UCSC:RGD:1565070 NextBio:706706
Genevestigator:Q6QI46 Uniprot:Q6QI46
Length = 291
Score = 181 (68.8 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 1 MPLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMDVKCPGCYKITTVFSHAQSVVICAGCS 60
M L + L + EE+RKHK +RLVQ PNSYFMDV+CPG Y+ITTVFS AQ+VV+
Sbjct: 167 MKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVLTI--- 223
Query: 61 TILCQPT 67
T + PT
Sbjct: 224 TYMLNPT 230
>WB|WBGene00044176 [details] [associations]
symbol:C30G7.2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z78239
EnsemblMetazoa:C30G7.2b KEGG:cel:CELE_C30G7.2 CTD:3565427
WormBase:C30G7.2b GeneTree:ENSGT00520000058107 OMA:DNRYVHG
Uniprot:H2FLI3
Length = 186
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 76 DDTGDSMTVRGCALDSGTPTTDTELIRMSHCGGFYFDDSQ 115
D+ ++ +R CALDSGT T DTE++R+SHCG F ++ Q
Sbjct: 112 DNESKTLVIRTCALDSGTLTADTEIVRISHCGSFKYEGHQ 151
>RGD|2320911 [details] [associations]
symbol:LOC100361049 "hypothetical protein LOC100361049"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000592 RGD:2320911 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR11594 EMBL:AY539919 IPI:IPI00454311
RefSeq:XP_002728916.1 RefSeq:XP_003753413.1 UniGene:Rn.157210
Ensembl:ENSRNOT00000044735 GeneID:100361049 KEGG:rno:100361049
UCSC:RGD:2320911 RGD:1593118 eggNOG:opiNOG23416
Genevestigator:Q6QI40 Uniprot:Q6QI40
Length = 109
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 2 PLAKDLLHPSQAEEKRKHKLKRLVQHPNSYFMD 34
PLAKDL HP EEKRK+K KRLVQ PNSYF++
Sbjct: 8 PLAKDL-HPCPEEEKRKYKKKRLVQSPNSYFVE 39
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 115 115 0.00091 102 3 11 22 0.45 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 548 (58 KB)
Total size of DFA: 125 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.74u 0.12s 13.86t Elapsed: 00:00:01
Total cpu time: 13.74u 0.13s 13.87t Elapsed: 00:00:01
Start: Thu Aug 15 15:19:39 2013 End: Thu Aug 15 15:19:40 2013