BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2575
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99LD9|EI2BB_MOUSE Translation initiation factor eIF-2B subunit beta OS=Mus musculus
GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 113/170 (66%), Gaps = 21/170 (12%)
Query: 5 IKSKSQEDDNYQESLHKLVVS---SDDEATDFA-----------------NPTSDTAPSQ 44
+ +S E D QESLHKL+ S S+D + FA T + +Q
Sbjct: 96 LHGRSDESDQ-QESLHKLLTSGGLSEDFSFHFAPLKANIIEAINELLVELEGTMENIAAQ 154
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQT 104
A EHIHSNE+I+T+GYS+ VE FLK AA+ RKF IV E +P +GHE+AV+L+K I+T
Sbjct: 155 ALEHIHSNEVIMTIGYSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKEGIET 214
Query: 105 VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
++ D+A+F ++SRVNK+IIGT T++ANG LR+V GTH +ALAA+H+S P
Sbjct: 215 TVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKHHSTP 264
>sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus
GN=EIF2B2 PE=2 SV=1
Length = 351
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 115/170 (67%), Gaps = 21/170 (12%)
Query: 5 IKSKSQEDDNYQESLHKLVVS---SDDEATDFAN-----------------PTSDTAPSQ 44
+ +S E D QESLHKL+ S S+D + +A T++ +Q
Sbjct: 96 LHGRSDESDQ-QESLHKLLTSGGLSEDFRSHYAQLQSNIIEAINELLVELEGTTENIAAQ 154
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQT 104
A EHIHSNE+I+T+G+S+ VE FL+ AA+ RKF IV E +P +GHE+AV+L+K+ I+T
Sbjct: 155 ALEHIHSNEVIMTIGFSRTVEAFLREAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIET 214
Query: 105 VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
++ D+A+F ++SRVNK+IIGT T++ANG LR+V GTH +ALAA+H+S P
Sbjct: 215 TVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVAGTHTLALAAKHHSTP 264
>sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu
rubripes GN=eif2b2 PE=3 SV=1
Length = 355
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 21/167 (12%)
Query: 9 SQEDDNYQESLHKLVVSSDDEATDF--------AN-------------PTSDTAPSQACE 47
S E+ + QESLHKL+ S +F AN T+D QA E
Sbjct: 102 SSEEADQQESLHKLLTSGGLSEENFRQHFAALRANVIEAINELLTELEGTTDNIAMQALE 161
Query: 48 HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107
HIHSNE+I+T+G S+ VE FLK+AA+ RKF IV E +P +GH++A SL+ + I+T +I
Sbjct: 162 HIHSNEVIMTVGRSRTVEAFLKDAARKRKFHVIVAECAPFCQGHKMATSLSTAGIETTVI 221
Query: 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
D+A+F ++SRVNK+IIGT TV+ANGGLR+V GTH +ALAA+H+S P
Sbjct: 222 ADAAIFAVMSRVNKVIIGTQTVLANGGLRAVNGTHTLALAAKHHSTP 268
>sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens
GN=EIF2B2 PE=1 SV=3
Length = 351
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 114/170 (67%), Gaps = 21/170 (12%)
Query: 5 IKSKSQEDDNYQESLHKLVVS---SDDEATDFAN-----------------PTSDTAPSQ 44
+ +S E D QESLHKL+ S ++D + +A T + +Q
Sbjct: 96 LHGRSDESDQ-QESLHKLLTSGGLNEDFSFHYAQLQSNIIEAINELLVELEGTMENIAAQ 154
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQT 104
A EHIHSNE+I+T+G+S+ VE FLK AA+ RKF IV E +P +GHE+AV+L+K+ I+T
Sbjct: 155 ALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIET 214
Query: 105 VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
++ D+A+F ++SRVNK+IIGT T++ANG LR+V GTH +ALAA+H+S P
Sbjct: 215 TVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTP 264
>sp|Q28690|EI2BB_RABIT Translation initiation factor eIF-2B subunit beta OS=Oryctolagus
cuniculus GN=EIF2B2 PE=1 SV=1
Length = 351
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 114/170 (67%), Gaps = 21/170 (12%)
Query: 5 IKSKSQEDDNYQESLHKLVVS---SDDEATDFAN-----------------PTSDTAPSQ 44
+ +S E D QESLHKL+ S S+D + +A T++ +Q
Sbjct: 96 LHGRSDESDQ-QESLHKLLTSGGLSEDFSFHYAQLQSNIVEAINELLVELEGTTENIAAQ 154
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQT 104
A EHIHSNE+I+T+G S+ VE FL+ AA+ RKF IV E +P +GHE+AV+L+K+ I+T
Sbjct: 155 ALEHIHSNEVIMTIGLSRTVEAFLREAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIET 214
Query: 105 VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
++ D+A+F ++SRVNK+IIGT T++ANG LR+V GTH +ALAA+H+S P
Sbjct: 215 TVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTP 264
>sp|Q62818|EI2BB_RAT Translation initiation factor eIF-2B subunit beta OS=Rattus
norvegicus GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 114/170 (67%), Gaps = 21/170 (12%)
Query: 5 IKSKSQEDDNYQESLHKLVVS---SDDEATDFA-----------------NPTSDTAPSQ 44
+ +S E D QESLHKL+ S S+D + +A T++ +Q
Sbjct: 96 LHGRSDESDQ-QESLHKLLTSGGLSEDFSFHYAPLKSNIIEAINELLVELEGTTENIAAQ 154
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQT 104
A EHIHSNE+I+T+G+S+ VE FL+ AAQ RKF I E +P +GHE+AV+L+++ I+T
Sbjct: 155 ALEHIHSNEVIMTIGFSRTVEAFLREAAQKRKFHVIAAECAPFCQGHEMAVNLSEAGIET 214
Query: 105 VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
++ D+A+F ++SRVNK+IIGT T++ANG LR+V GTH +ALAA+H+S P
Sbjct: 215 TVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKHHSTP 264
>sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium
discoideum GN=eif2b2 PE=3 SV=1
Length = 388
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 106/158 (67%), Gaps = 4/158 (2%)
Query: 10 QEDDNYQESLHKL---VVSSDDEATDFANPTSDTAPSQACEHIHSNEIILTLGYSKIVEL 66
QED ++ E+ +L ++ S +E D QA EHIHSNE I+TLG S+ VE
Sbjct: 152 QEDIDFTETFPRLKAAIMDSINELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEE 211
Query: 67 FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126
FLK AA+ R F+ IV+E +P +G + A+SL+K+ I T LI DSA+F ++SRVNK+IIGT
Sbjct: 212 FLKEAARKRSFKVIVVETAPSLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGT 271
Query: 127 HTVMANGGLRSVCGTHAVALAAQHYSIP-YPCTFLLNI 163
H VMANGGL + GTH +A+AA+++S+P CT L +
Sbjct: 272 HAVMANGGLIATSGTHTLAVAAKYHSVPIVVCTGLYKL 309
>sp|Q9UT76|EI2BB_SCHPO Probable translation initiation factor eIF-2B subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif222 PE=1 SV=1
Length = 393
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 19 LHKLVVSSDDEATDFANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQ 78
+ +++S + D + + Q+ +H+HSNEIILT G SK VE FL+ AA+ RKF
Sbjct: 169 MRAVIISGIQDVIDELDKINTDIEVQSMDHLHSNEIILTQGCSKTVEAFLRFAAKKRKFS 228
Query: 79 CIVMENSPENK--GHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLR 136
IV E P N+ H +A LA++ I T +I D+ +F ++SRVNK+I+GTH ++ NGGL
Sbjct: 229 VIVAEGFPNNQKGSHAMAKRLAQAGIDTTVISDATIFAIMSRVNKVILGTHAILGNGGLV 288
Query: 137 SVCGTHAVALAAQHYSIP 154
+ G VA AA+H++ P
Sbjct: 289 TYSGAQLVAQAARHHATP 306
>sp|P32502|EI2BB_YEAST Translation initiation factor eIF-2B subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCD7 PE=1
SV=1
Length = 381
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 45 ACEHIHSNEIILT-LGYSKIVELFLKNAAQ--HRKFQCIVMENSPEN--KGHELAVSLAK 99
A + IH +EI+LT SK V FL A + +R F +V E P N HE A LA+
Sbjct: 176 AIDLIHDHEILLTPTPDSKTVLKFLITARERSNRTFTVLVTEGFPNNTKNAHEFAKKLAQ 235
Query: 100 SKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGG-LRSVCGTHAVALAAQHYSIP 154
I+T+++PDSA+F L+SRV K+IIGT V NGG + S G +V A+ + P
Sbjct: 236 HNIETLVVPDSAVFALMSRVGKVIIGTKAVFVNGGTISSNSGVSSVCECAREFRTP 291
>sp|P14741|EI2BA_YEAST Translation initiation factor eIF-2B subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCN3 PE=1
SV=1
Length = 305
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAA-QHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
+ I ++IIL GYS+ V L +AA + +F+C+V E+ P +G++L L + I
Sbjct: 116 GVDFIADDDIILVHGYSRAVFSLLNHAANKFIRFRCVVTESRPSKQGNQLYTLLEQKGIP 175
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
LI DSA+ +I +V+K+ +G V +GG+ ++ GT++V + A + P+
Sbjct: 176 VTLIVDSAVGAVIDKVDKVFVGAEGVAESGGIINLVGTYSVGVLAHNARKPF 227
>sp|Q54FM3|EI2BD_DICDI Translation initiation factor eIF-2B subunit delta OS=Dictyostelium
discoideum GN=eif2b4 PE=3 SV=1
Length = 619
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
C I+ ++ILT S +VEL ++ A Q +KF+ I++++ P+++G EL L ++
Sbjct: 411 GCSKINDGDVILTYASSHVVELIIQQAIQDKKKFRLIIVDSRPKHEGRELLHRLVLHGVK 470
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
I A+ ++ V K+ +G ++V++NG L S GT VA A+ Y++P+
Sbjct: 471 ITYIMLHAVSYIMKEVTKVFVGAYSVLSNGNLISRSGTSLVASMAKFYNVPF 522
>sp|Q54I81|EI2BA_DICDI Translation initiation factor eIF-2B subunit alpha OS=Dictyostelium
discoideum GN=eif2b1 PE=3 SV=1
Length = 321
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 38 SDTAPSQ-ACEHIHSNEIILTLGYSKIV-ELFLKNAAQHRKFQCIVMENSPENKGHELAV 95
S T SQ A + I IL G+S++V L L A Q ++F IV E+ P++ G++ A
Sbjct: 116 SRTKISQLADKFIRDGVTILVHGFSRVVLGLLLHAAFQGKRFSVIVTESRPDSSGYKTAA 175
Query: 96 SLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
L + I LI D + +I +V+ +++G ++ NGG+ + GT+ +++ A+ + P+
Sbjct: 176 RLQAANIPVKLIMDGGVSRIIDKVDYVLVGAEAIVENGGIVNKIGTYQISIVAKAFKKPF 235
>sp|Q61749|EI2BD_MOUSE Translation initiation factor eIF-2B subunit delta OS=Mus musculus
GN=Eif2b4 PE=2 SV=2
Length = 524
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A I ++IL G S +V L+ A + R+F+ +V+++ P +G + SL ++ +
Sbjct: 324 ASTKISDGDVILVYGCSSLVSRILQEARVEGRRFRVVVVDSRPRLEGRHMLHSLVRAGVP 383
Query: 104 T--VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
T +LIP ++ ++ V+K+++G H ++ANG + S GT +AL A+ +++P
Sbjct: 384 TSYLLIPAASY--VLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVP 434
>sp|Q63186|EI2BD_RAT Translation initiation factor eIF-2B subunit delta OS=Rattus
norvegicus GN=Eif2b4 PE=2 SV=1
Length = 524
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A + I ++IL G S +V L+ A + R+F+ +V+++ P +G + L ++ +
Sbjct: 324 ASKKISDGDVILVYGCSSLVSRILQEAWVEGRRFRVVVVDSRPRLEGRHMLHCLVRAGVP 383
Query: 104 T--VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
T +LIP ++ ++ V+K+++G H ++ANG + S GT +AL A+ +++P
Sbjct: 384 TSYLLIPAASY--VLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVP 434
>sp|P41111|EI2BD_RABIT Translation initiation factor eIF-2B subunit delta OS=Oryctolagus
cuniculus GN=EIF2B4 PE=2 SV=2
Length = 523
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A + I + ++IL G S +V L+ A ++ RKF+ +V+++ P +G + L ++ +
Sbjct: 323 ASKKISNGDVILVYGCSSLVSRILQEAWSEGRKFRVVVVDSRPRLEGRHMLRFLVRAGVP 382
Query: 104 T--VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
+LIP ++ ++ V+K+++G H ++ANG + S GT +AL A+ +++P
Sbjct: 383 ASYLLIPAASY--VLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVP 433
>sp|O28242|EI2B2_ARCFU Putative translation initiation factor eIF-2B subunit 2
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2037 PE=3 SV=1
Length = 313
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGG 134
++ + I E+ P +GH L ++ I+ LI DSA+ I+ V+ +++G T+ ANG
Sbjct: 138 KRVEVIATESRPRWQGHLTVKQLREAGIEVTLIVDSAVRYFINEVDCVVVGADTITANGA 197
Query: 135 LRSVCGTHAVALAAQHYSIPY 155
L + GT +ALAA+ +P+
Sbjct: 198 LINKIGTSQIALAAKEARVPF 218
>sp|Q9USP0|EI2BA_SCHPO Translation initiation factor eIF-2B subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif221 PE=3 SV=1
Length = 341
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 49 IHSNEIILTLGYSK-IVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107
I +ILT G+S+ + + L A +H +F+ V E+ P G + +L + I T ++
Sbjct: 133 IRDGSVILTHGFSRGVAAVLLAAAKRHVRFKVFVTESRPSGSGCLMTRTLKNACIPTCMV 192
Query: 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
DSA+ ++RV+ +++G V+ NGGL + GT +A+ A+H P+
Sbjct: 193 LDSAVSFTMNRVDLVLVGAEGVVENGGLINQIGTFQLAVFAKHAHKPF 240
>sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens
GN=EIF2B4 PE=1 SV=2
Length = 523
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A + I + ++IL G S +V L+ A + R+F+ +V+++ P +G SL + +
Sbjct: 323 AYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVP 382
Query: 104 T--VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
+LIP ++ ++ V+K+++G H ++ANG + S GT +AL A+ +++P
Sbjct: 383 ASYLLIPAASY--VLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVP 433
>sp|Q3T058|EI2BD_BOVIN Translation initiation factor eIF-2B subunit delta OS=Bos taurus
GN=EIF2B4 PE=2 SV=1
Length = 524
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A + I + ++IL G S +V L+ A A+ R+F+ +V+++ P + SL ++ +
Sbjct: 324 AYKKISNGDVILVYGCSSLVSHILQEAWAKGRQFRVVVVDSRPRLEAKHTLRSLVRAGVP 383
Query: 104 T--VLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
+LIP ++ ++ V+K+++G H ++ANG + S GT +AL A+ +++P
Sbjct: 384 ASYLLIPAASY--VLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVP 434
>sp|Q09924|EI2BD_SCHPO Probable translation initiation factor eIF-2B subunit delta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif224 PE=1 SV=1
Length = 467
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
A E I ++ILT +S V L +A +KF+ +V+++ PE +G L + I+
Sbjct: 261 ATEKIQDGDVILTYLHSSTVNDVLIHAKNVGKKFRVVVVDSRPEFEGRVCLKLLTEHGIE 320
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
+ SA+ ++ V KI +G H +++NG L S GT ++L ++P
Sbjct: 321 CTYVMISALSYIMQEVTKIFLGGHAMLSNGALYSRAGTSLISLLGHESNVP 371
>sp|Q64270|EI2BA_RAT Translation initiation factor eIF-2B subunit alpha OS=Rattus
norvegicus GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 55 ILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113
ILT YS++V L+ A A ++F + E+ P+ G ++A +L + ++ D+A+
Sbjct: 125 ILTHAYSRVVLRVLEEAVAAKKRFSVYITESQPDLSGKKMAKALCHLNVPVTVVLDAAVG 184
Query: 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
++ +V+ +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 185 YIMEKVDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|Q0IIF2|EI2BA_BOVIN Translation initiation factor eIF-2B subunit alpha OS=Bos taurus
GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 55 ILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113
ILT YS++V L+ A A ++F + E+ P+ G ++A +L + ++ D+A+
Sbjct: 125 ILTHAYSRVVLRVLEAAVAAKKRFSVYITESQPDLSGKKMAKALCHLNVPVTVVLDAAVG 184
Query: 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
++ +V+ +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 185 YIMEKVDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|Q4R4V8|EI2BA_MACFA Translation initiation factor eIF-2B subunit alpha OS=Macaca
fascicularis GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 49 IHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107
I ILT YS++V L+ A A ++F V E+ P+ G ++A +L + ++
Sbjct: 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVV 178
Query: 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
D+A+ ++ + + +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 179 LDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|Q5RAR0|EI2BA_PONAB Translation initiation factor eIF-2B subunit alpha OS=Pongo abelii
GN=EIF2B1 PE=2 SV=2
Length = 305
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 49 IHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107
I ILT YS++V L+ A A ++F V E+ P+ G ++A +L + ++
Sbjct: 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVV 178
Query: 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
D+A+ ++ + + +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 179 LDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens
GN=EIF2B1 PE=1 SV=1
Length = 305
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 49 IHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107
I ILT YS++V L+ A A ++F V E+ P+ G ++A +L + ++
Sbjct: 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVV 178
Query: 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
D+A+ ++ + + +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 179 LDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|D7TCD0|MTNA_VITVI Methylthioribose-1-phosphate isomerase OS=Vitis vinifera
GN=VIT_11s0016g00830 PE=2 SV=2
Length = 376
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 55 ILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSAMF 113
+ T GY + + A+ + E P N+G L A L I LI DSA
Sbjct: 181 LATAGYGTALGVIRSVHAEGILLRAYCTETRPFNQGSRLTAFELVHDNIPATLIADSAAA 240
Query: 114 GLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
L+ RV+ +I+G V ANG + GT+++AL+A+H+ IP+
Sbjct: 241 ALMQAGRVDAVIVGADRVAANGDTANKIGTYSLALSAKHHHIPF 284
>sp|Q99LC8|EI2BA_MOUSE Translation initiation factor eIF-2B subunit alpha OS=Mus musculus
GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 55 ILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113
ILT YS++V L+ A A ++F + E+ P+ G ++A +L+ + ++ D+A+
Sbjct: 125 ILTHAYSRVVLRVLEEAVAAKKRFSVYITESQPDLSGKKMAKALSHLNVPVTVVLDAAVG 184
Query: 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
++ + + +I+G V+ NGG+ + GT+ +A+ A+ + P+
Sbjct: 185 YIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPF 226
>sp|P12754|EI2BD_YEAST Translation initiation factor eIF-2B subunit delta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCD2 PE=1
SV=1
Length = 651
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 45 ACEHIHSNEIILTLGYSKIV-ELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSKI 102
A I + I+T G SK++ EL L NA +K + IV+++ P +G ++A +L + +
Sbjct: 390 ASTQIEESTTIVTYGSSKVLTELLLHNAISLKKNIKVIVVDSRPLFEGRKMAETLRNAGV 449
Query: 103 QTVLIPDSAMFGLISR--------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
+ M+ LI+ V+ + +G H++++NG L S GT +A++A+ +IP
Sbjct: 450 -------NVMYALITSLDTIFNMDVDYVFLGAHSILSNGFLYSRAGTAMLAMSAKRRNIP 502
>sp|O58185|EI2BL_PYRHO Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH0440 PE=1 SV=1
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 43 SQACEHIHSNEIILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSK 101
S + I ++I+T +S V ++ A + +K F+ I+ E+SP+ +G LA L S
Sbjct: 101 SIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSG 160
Query: 102 IQTVLIPDSAMFGLISRVNKI-IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
I+ +I D+ M GL R I I+G + +G + + GT+ +ALA +IP+
Sbjct: 161 IEFEVITDAQM-GLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPF 214
>sp|Q9ZUG4|MTNA_ARATH Methylthioribose-1-phosphate isomerase OS=Arabidopsis thaliana
GN=At2g05830 PE=2 SV=2
Length = 374
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 83 ENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGLI--SRVNKIIIGTHTVMANGGLRSVC 139
E P N+G L A L KI LI DSA L+ RV+ +I+G V +NG +
Sbjct: 206 ETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDGRVDGVIVGADRVASNGDTANKI 265
Query: 140 GTHAVALAAQHYSIPY 155
GT+++AL A+H+ IP+
Sbjct: 266 GTYSLALCAKHHGIPF 281
>sp|B9HCR2|MTNA_POPTR Methylthioribose-1-phosphate isomerase OS=Populus trichocarpa
GN=POPTRDRAFT_832064 PE=3 SV=1
Length = 384
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 83 ENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGLI--SRVNKIIIGTHTVMANGGLRSVC 139
E P N+G L A L KI LI DSA L+ S+V+ +++G V ANG +
Sbjct: 212 ETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDSKVSAVVVGADRVAANGDTANKI 271
Query: 140 GTHAVALAAQHYSIPY 155
GT+++AL A H++IP+
Sbjct: 272 GTYSLALCAMHHNIPF 287
>sp|Q8U3J1|EI2BL_PYRFU Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0475 PE=3 SV=1
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 43 SQACEHIHSNEIILTLGYSKIVELFLKNAAQH-RKFQCIVMENSPENKGHELAVSLAKSK 101
S + I S ++I+T YS V LK A + ++F+ I+ E++P+ +G LA +L
Sbjct: 101 SIGAQLIDSGDVIITHSYSSAVFEILKTAKRRGKQFKVILTESAPDYEGLYLAKALQDES 160
Query: 102 IQTVLIPDSAMFGLISRVNKI-IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
I+ +I D A GL ++ + I+G TV +G + + GT+ +A++ +P+
Sbjct: 161 IEVEIITD-AQLGLFAKDATLAIVGADTVTKDGYVVNKAGTYLLAISCYESEVPF 214
>sp|B9RR88|MTNA_RICCO Methylthioribose-1-phosphate isomerase OS=Ricinus communis
GN=RCOM_0711420 PE=2 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 55 ILTLGYSKIVELF--LKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSA 111
+ T GY + + L A R+ C E P N+G L A L KI L+ DSA
Sbjct: 186 LATAGYGTALGVIRALHAAGVLRRAYC--TETRPFNQGSRLTAFELVHEKIPATLVADSA 243
Query: 112 MFGLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
L+ +V+ +I+G V ANG + GT+++AL A H++IP+
Sbjct: 244 AAALMKDDQVSAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPF 289
>sp|O57947|EI2B2_PYRHO Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH0208 PE=3 SV=1
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
+ I +II+T +SK +K A Q + + IV E P+ +G A LA I
Sbjct: 121 GAKRIEDGDIIMTHCHSKAAISVMKKAFEQGKNIKVIVTETRPKWQGKITAKELASYGIP 180
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSI 153
+ I DSA + +K+++G ++ ANG + + GT +AL A+ + +
Sbjct: 181 VIYIVDSAARHYMKMTDKVVMGADSITANGAVINKIGTSLIALTAKEHRV 230
>sp|Q9UYB6|EI2BL_PYRAB Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB15920
PE=3 SV=1
Length = 276
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 43 SQACEHIHSNEIILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSK 101
S + I ++I+T +S V K A RK F+ I+ E+SP+ +G LA L
Sbjct: 101 SIGAQLIDDGDVIITHSFSSSVLEIFKVAKDRRKSFKVIITESSPDYEGLHLANELENLG 160
Query: 102 IQTVLIPDSAMFGLISRVNKI-IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
I+ +I DS M GL R I ++G V +G + + GT+ +ALA +P+
Sbjct: 161 IEFEVITDSQM-GLFCRKATISMVGADMVTRDGFVVNKAGTYLLALACHESDVPF 214
>sp|Q948X8|MTNA_TOBAC Methylthioribose-1-phosphate isomerase OS=Nicotiana tabacum GN=CIG2
PE=2 SV=1
Length = 374
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 55 ILTLGYSK---IVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDS 110
+ T GY ++ + R F C E P N+G L A L I LI DS
Sbjct: 180 LATAGYGTALGVIRALYTDGVLERAF-C--TETRPFNQGSRLTAFELVHENIPATLIADS 236
Query: 111 AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
A L++ RV +I+G V ANG + GT+ +A++A H+ IP+
Sbjct: 237 AAAALMNAGRVKAVIVGADRVAANGDTANKIGTYNLAVSAMHHGIPF 283
>sp|B8J4S7|MTNA_DESDA Methylthioribose-1-phosphate isomerase OS=Desulfovibrio
desulfuricans (strain ATCC 27774 / DSM 6949) GN=mtnA
PE=3 SV=1
Length = 378
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 46 CEHIHSNEIIL-TLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQ 103
C H N L T GY + + +K I E P +G L A L + I
Sbjct: 152 CVLTHCNAGALATAGYGTALGVIRAAVEAGKKVSVIADETRPFLQGARLTAWELERDGIP 211
Query: 104 TVLIPDSAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
+ D+A L+SR V ++++G + ANG + GT+ VAL A+H+ IP+
Sbjct: 212 VTVACDNACALLMSRGLVQRVVVGADRIAANGDTANKIGTYGVALLARHFHIPF 265
>sp|B2FKI7|MTNA_STRMK Methylthioribose-1-phosphate isomerase OS=Stenotrophomonas
maltophilia (strain K279a) GN=mtnA PE=3 SV=1
Length = 354
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 55 ILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAV-SLAKSKIQTVLIPDSAMF 113
+ T G+ + + AQHR + E P +G L V L + I LI DSA
Sbjct: 170 LATAGFGTALGVIRAGMAQHRIARVFAGETRPWLQGARLTVWELQQDGIDATLIADSAAS 229
Query: 114 GLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
L+ V +I+G + ANG + GT+ +A+AA+H+ + +
Sbjct: 230 HLMKTGAVQWVIVGADRICANGDTANKIGTYQLAIAARHHGVKF 273
>sp|A4S068|MTNA_OSTLU Methylthioribose-1-phosphate isomerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_35743 PE=3 SV=1
Length = 365
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 55 ILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSAMF 113
+ T GY + + R + +E P N+G L A L KI LI D+
Sbjct: 174 LATAGYGTALGVIRALWESGRLERAYCLETRPYNQGSRLTAYELVYEKIPGTLICDNMAA 233
Query: 114 GLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154
L++R V+ I++G V ANG + GT+++A+ A+H+ +P
Sbjct: 234 ALMARGDVDAIVVGADRVAANGDFANKIGTYSLAVNAKHHGVP 276
>sp|B4SP84|MTNA_STRM5 Methylthioribose-1-phosphate isomerase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=mtnA PE=3 SV=1
Length = 354
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 55 ILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAV-SLAKSKIQTVLIPDSAMF 113
+ T G+ + + AQHR + E P +G L V L + I LI DSA
Sbjct: 170 LATAGFGTALGVIRAGMAQHRIARVFAGETRPWLQGARLTVWELQQDGIDATLIADSAAS 229
Query: 114 GLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
L+ V +I+G + ANG + GT+ +A+AA+H+ + +
Sbjct: 230 HLMKTGAVQWVIVGADRICANGDTANKIGTYQLAIAARHHGVKF 273
>sp|Q5B590|MTNA_EMENI Methylthioribose-1-phosphate isomerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=mri1 PE=3 SV=1
Length = 379
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 55 ILTLGYSK----IVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPD 109
+ T GY I L N QH E P N+G L A L KI LI D
Sbjct: 178 LATAGYGTALGVIRSLMANNTLQH----AYCTETRPYNQGSRLTAFELVHDKIPATLITD 233
Query: 110 SAMFGLISR----VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
S L+SR VN I++G V ANG + GT+ +A+ A+++ + +
Sbjct: 234 SMAAALLSRPETRVNAIVVGADRVAANGDTANKIGTYGLAVLARYHGVKF 283
>sp|Q9V281|EI2B2_PYRAB Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aIF-2BII
PE=3 SV=1
Length = 324
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
+ I ++I+T +SK +K A Q + + IV E P +G A LA I
Sbjct: 121 GAKRIEDGDVIMTHCHSKAAISVMKTAFDQGKDIKVIVTETRPRWQGKITAKELASYGIP 180
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSI 153
+ + DSA + +K+++G ++ ANG + + GT +AL A+ + +
Sbjct: 181 VIYVVDSAARHYMKMTDKVVMGADSITANGAVINKIGTSLIALTAKEHRV 230
>sp|Q57586|EI2B2_METJA Putative translation initiation factor eIF-2B subunit 2
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0122
PE=3 SV=1
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 73 QHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132
+ + + E P N+G+ A +L I LI DSA+ I ++ +++G + AN
Sbjct: 144 EGKDIKVFCTETRPRNQGYLTAKTLYDYGIDVTLIVDSAVRYFIKEIDIVVVGADAITAN 203
Query: 133 GGLRSVCGTHAVALAAQHYSIPY 155
G L + GT +AL A +P+
Sbjct: 204 GCLVNKIGTSQIALIANESRVPF 226
>sp|P34604|EI2BA_CAEEL Probable translation initiation factor eIF-2B subunit alpha
OS=Caenorhabditis elegans GN=ZK1098.4 PE=1 SV=1
Length = 305
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 55 ILTLGYSKIV-ELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113
ILT YSK+V E L V E+ P+ G + L K+ + T L+ DS +
Sbjct: 129 ILTHSYSKVVLETILDAHKSGYHLHVWVTESQPDASGKLVFEELKKNGVPTTLVLDSCVG 188
Query: 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP-YPC 157
++ R+ +++G VM GG+ + GT V + A+ +P Y C
Sbjct: 189 YVMERIQAVLVGAEGVMETGGIINKIGTVNVCIIAKSRHVPVYVC 233
>sp|A9BHC5|MTNA2_PETMO Methylthioribose-1-phosphate isomerase 2 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=mtnA2 PE=3 SV=1
Length = 349
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 57 TLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAV-SLAKSKIQTVLIPDSAMFGL 115
T+ Y + + + Q E P +G L V L KS I+T LI D+ M G
Sbjct: 169 TVDYGTALGVIRAAVENGKDIQVYADETRPYLQGARLTVWELVKSGIKTTLITDN-MAGW 227
Query: 116 I---SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
+ ++N +I+G + NG + + GT++VA+ A+ + IP+
Sbjct: 228 VMKQGKINAVIVGADRIARNGDVANKIGTYSVAVLAKRHGIPF 270
>sp|B7IFW5|MTNA_THEAB Methylthioribose-1-phosphate isomerase OS=Thermosipho africanus
(strain TCF52B) GN=mtnA PE=3 SV=1
Length = 346
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 57 TLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGL 115
T+ Y + + Q +K + E P +G L A L K I LI D+ M G
Sbjct: 164 TVDYGTALGVIRAAVEQGKKIKVFADETRPYLQGARLTAWELMKDGIDVTLISDN-MSGW 222
Query: 116 ---ISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155
+ ++N +I+G V ANG + + GT+ VA+ A+ + IP+
Sbjct: 223 SMKLGKINAVIVGADRVAANGDVANKIGTYMVAVLAKRHGIPF 265
>sp|Q0VPK6|MTNA_ALCBS Methylthioribose-1-phosphate isomerase OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=mtnA PE=3 SV=1
Length = 346
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 17 ESLHKLVVSSDDEATDFANPTSDTAPSQACEHIHSNEIIL-TLGYSKIVELFLKNAAQHR 75
E++H+ ++++ +F +D PS A + H N L T G+ + + A+++
Sbjct: 122 EAIHREDLAANQAMGEFG---ADLLPSGATVYTHCNTGALATGGHGTALGIIRSAWARNQ 178
Query: 76 KFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGLI--SRVNKIIIGTHTVMAN 132
E P +G L + L I L+ DS L+ ++ +I+G + AN
Sbjct: 179 LTGVFAGETRPWLQGSRLTSWELLNDGIPVTLVADSCAGQLMQQGKIQAVIVGADRITAN 238
Query: 133 GGLRSVCGTHAVALAAQHYSIPY 155
G + GT+ +A+ AQH++IP+
Sbjct: 239 GDTANKIGTYNLAVLAQHHNIPF 261
>sp|D2VAA9|MTNA_NAEGR Methylthioribose-1-phosphate isomerase OS=Naegleria gruberi
GN=NAEGRDRAFT_32363 PE=3 SV=1
Length = 380
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 69 KNAAQHRKFQCIVMENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGLIS--RVNKIIIG 125
KN +H E P N+G L A L KI + LI DSA+ L +++ II+G
Sbjct: 200 KNVLEH----AFCTETRPYNQGARLTAFELVYEKIPSTLICDSAVSYLFKTKKIDAIIVG 255
Query: 126 THTVMANGGLRSVCGTHAVALAAQHYSIPY 155
V NG + GT+ +A++A+H+ IP+
Sbjct: 256 ADRVCNNGDTANKIGTYHIAVSAKHHGIPF 285
>sp|Q8U4G6|EI2B2_PYRFU Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2
Length = 324
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 45 ACEHIHSNEIILTLGYSKIVELFLKNA-AQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103
+ I ++I+T +SK +K A Q + + IV E P +G A LA I
Sbjct: 121 GAKRIEDGDVIMTHCHSKAAISVMKTAFDQGKDIKVIVTETRPRWQGKITAKELASYGIP 180
Query: 104 TVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSI 153
+ I D A + +K+++G ++ ANG + + GT +AL A+ + +
Sbjct: 181 VIYIVDGAARHYMKMTDKVVMGADSITANGAVINQIGTALIALTAKEHRV 230
>sp|O60185|MTNA_SCHPO Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mri1 PE=3 SV=1
Length = 359
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 83 ENSPENKGHEL-AVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGT 141
E P N+G L A L KI L+ DS + ++ +++ I++G V NG + GT
Sbjct: 190 ETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMHKIDAIVVGADRVTRNGDTANKIGT 249
Query: 142 HAVALAAQHYSIPY 155
+ +A+ A+H+ P+
Sbjct: 250 YNLAILAKHFGKPF 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,465,112
Number of Sequences: 539616
Number of extensions: 1983981
Number of successful extensions: 5999
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 5729
Number of HSP's gapped (non-prelim): 351
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)