Query psy2575
Match_columns 165
No_of_seqs 111 out of 1091
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 19:41:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a11_A Translation initiation 100.0 7E-41 2.4E-45 287.8 14.2 129 34-162 124-253 (338)
2 3ecs_A Translation initiation 100.0 1.6E-40 5.5E-45 283.2 13.6 127 35-161 105-232 (315)
3 1t9k_A Probable methylthioribo 100.0 3.6E-39 1.2E-43 278.0 13.3 129 34-162 131-271 (347)
4 2yvk_A Methylthioribose-1-phos 100.0 1.8E-38 6.1E-43 275.9 12.9 129 34-162 156-296 (374)
5 1t5o_A EIF2BD, translation ini 100.0 4E-38 1.4E-42 271.9 13.2 128 34-162 129-268 (351)
6 2a0u_A Initiation factor 2B; S 100.0 4.3E-38 1.5E-42 274.3 12.3 129 34-162 152-300 (383)
7 1vb5_A Translation initiation 100.0 1E-36 3.5E-41 255.3 16.2 128 35-162 93-221 (276)
8 1w2w_B 5-methylthioribose-1-ph 100.0 7E-31 2.4E-35 209.9 8.6 89 74-162 2-95 (191)
9 2f8m_A Ribose 5-phosphate isom 98.3 1.9E-06 6.4E-11 70.8 9.0 113 35-161 10-130 (244)
10 1uj6_A Ribose 5-phosphate isom 98.3 1.8E-06 6.1E-11 70.1 8.6 112 35-162 6-125 (227)
11 1lk5_A D-ribose-5-phosphate is 98.3 4.8E-06 1.6E-10 67.7 9.8 112 35-161 4-123 (229)
12 1m0s_A Ribose-5-phosphate isom 98.2 4.2E-06 1.4E-10 67.6 8.9 113 35-161 4-119 (219)
13 3kwm_A Ribose-5-phosphate isom 98.0 1.6E-05 5.4E-10 64.6 7.9 94 35-141 10-104 (224)
14 1xtz_A Ribose-5-phosphate isom 98.0 1.8E-05 6.2E-10 65.6 7.5 113 35-161 19-145 (264)
15 3hhe_A Ribose-5-phosphate isom 97.9 5E-05 1.7E-09 62.7 9.9 92 35-140 25-120 (255)
16 3l7o_A Ribose-5-phosphate isom 97.9 5.7E-05 2E-09 61.3 9.1 92 36-141 3-99 (225)
17 1o8b_A Ribose 5-phosphate isom 97.9 3.4E-06 1.2E-10 68.2 1.8 112 36-161 5-119 (219)
18 2pjm_A Ribose-5-phosphate isom 97.9 8.2E-05 2.8E-09 60.4 9.6 91 35-140 4-100 (226)
19 3uw1_A Ribose-5-phosphate isom 97.5 0.0002 6.8E-09 58.6 6.6 90 35-137 12-106 (239)
20 1w2w_A 5-methylthioribose-1-ph 96.8 0.00014 4.9E-09 58.5 -0.8 43 35-77 148-208 (211)
21 4gmk_A Ribose-5-phosphate isom 96.3 0.042 1.5E-06 44.5 10.6 105 35-151 5-117 (228)
22 3ixq_A Ribose-5-phosphate isom 93.7 0.21 7.3E-06 40.3 7.5 84 35-131 4-90 (226)
23 4dq6_A Putative pyridoxal phos 92.5 3.4 0.00012 33.2 13.3 118 34-157 69-202 (391)
24 3i6i_A Putative leucoanthocyan 90.9 1.5 5.3E-05 35.4 9.4 102 52-159 10-118 (346)
25 4gx0_A TRKA domain protein; me 90.0 0.89 3.1E-05 40.0 7.7 104 45-159 316-440 (565)
26 3llv_A Exopolyphosphatase-rela 89.7 2.6 9.1E-05 29.5 8.8 90 52-157 6-100 (141)
27 3nbm_A PTS system, lactose-spe 89.7 0.76 2.6E-05 32.6 5.8 77 75-161 5-87 (108)
28 3dqp_A Oxidoreductase YLBE; al 89.6 1.9 6.6E-05 32.3 8.5 101 54-161 2-106 (219)
29 1o1y_A Conserved hypothetical 89.3 0.71 2.4E-05 36.6 5.9 85 75-159 11-100 (239)
30 3e8x_A Putative NAD-dependent 89.3 1.2 4.1E-05 33.9 7.1 103 51-159 20-129 (236)
31 3l9w_A Glutathione-regulated p 89.2 1.6 5.5E-05 37.5 8.6 91 51-157 3-98 (413)
32 3ruf_A WBGU; rossmann fold, UD 88.4 5.3 0.00018 31.9 10.7 109 51-160 24-150 (351)
33 3hgm_A Universal stress protei 88.0 5 0.00017 27.7 9.3 61 94-158 76-147 (147)
34 2w48_A Sorbitol operon regulat 88.0 1 3.6E-05 36.9 6.3 91 37-128 91-214 (315)
35 3s3t_A Nucleotide-binding prot 88.0 5 0.00017 27.7 10.3 61 94-158 75-145 (146)
36 3g0t_A Putative aminotransfera 87.8 3.4 0.00012 34.0 9.5 118 35-157 85-220 (437)
37 3dzz_A Putative pyridoxal 5'-p 87.8 9.2 0.00032 30.6 12.2 118 34-157 64-198 (391)
38 2h1q_A Hypothetical protein; Z 87.8 1.9 6.6E-05 35.4 7.7 84 50-162 139-222 (270)
39 3eag_A UDP-N-acetylmuramate:L- 86.4 6.5 0.00022 32.1 10.3 89 53-156 5-94 (326)
40 3h14_A Aminotransferase, class 86.2 7.6 0.00026 31.4 10.6 118 34-157 70-199 (391)
41 3la8_A SMU.1229, putative puri 86.2 2.7 9.3E-05 35.1 7.9 70 58-159 190-263 (303)
42 3fdb_A Beta C-S lyase, putativ 86.1 4.3 0.00015 32.5 8.9 117 35-157 61-188 (377)
43 1qyd_A Pinoresinol-lariciresin 85.9 4.2 0.00014 31.9 8.6 103 52-158 4-114 (313)
44 2gas_A Isoflavone reductase; N 85.9 3.4 0.00012 32.4 8.0 98 53-158 3-110 (307)
45 1yaa_A Aspartate aminotransfer 85.7 9 0.00031 31.2 10.9 119 34-157 75-214 (412)
46 1qz9_A Kynureninase; kynurenin 85.7 8.3 0.00028 31.3 10.6 114 39-157 74-200 (416)
47 3npg_A Uncharacterized DUF364 85.5 1.9 6.5E-05 34.9 6.4 87 50-162 114-200 (249)
48 3rrl_A Succinyl-COA:3-ketoacid 85.4 4.3 0.00015 32.5 8.5 32 118-149 151-186 (235)
49 3fwz_A Inner membrane protein 85.2 7.9 0.00027 27.3 9.1 91 52-158 7-104 (140)
50 3isl_A Purine catabolism prote 84.8 14 0.00048 29.8 12.1 114 38-158 46-172 (416)
51 1kmj_A Selenocysteine lyase; p 84.7 12 0.00041 29.9 11.0 113 40-157 71-199 (406)
52 4adb_A Succinylornithine trans 84.6 8.1 0.00028 31.2 10.0 121 33-157 78-222 (406)
53 2z61_A Probable aspartate amin 84.4 7.4 0.00025 31.2 9.6 114 34-157 68-188 (370)
54 1qyc_A Phenylcoumaran benzylic 83.9 3.8 0.00013 32.1 7.5 99 52-158 4-111 (308)
55 1eg5_A Aminotransferase; PLP-d 83.8 14 0.00049 29.2 11.1 100 52-157 62-176 (384)
56 2aef_A Calcium-gated potassium 83.8 8.8 0.0003 29.3 9.4 91 51-158 8-102 (234)
57 1c7n_A Cystalysin; transferase 83.8 16 0.00053 29.5 11.9 118 34-157 68-202 (399)
58 3c85_A Putative glutathione-re 83.3 10 0.00036 27.6 9.4 86 52-152 39-130 (183)
59 3ic5_A Putative saccharopine d 83.3 7.6 0.00026 25.6 10.2 94 52-160 5-101 (118)
60 3ab8_A Putative uncharacterize 83.3 7.5 0.00026 29.9 8.9 99 53-158 155-267 (268)
61 3kax_A Aminotransferase, class 83.3 16 0.00053 29.1 12.0 118 34-157 61-194 (383)
62 3ftb_A Histidinol-phosphate am 83.2 10 0.00035 30.0 9.9 112 34-157 63-182 (361)
63 1t3i_A Probable cysteine desul 83.2 14 0.00047 29.8 10.8 113 40-157 76-204 (420)
64 2r6j_A Eugenol synthase 1; phe 83.1 4.7 0.00016 31.9 7.8 96 54-158 13-113 (318)
65 2q7w_A Aspartate aminotransfer 83.1 13 0.00044 29.9 10.6 120 34-157 71-210 (396)
66 3lk7_A UDP-N-acetylmuramoylala 82.9 5.5 0.00019 34.1 8.7 92 51-156 8-100 (451)
67 2yvq_A Carbamoyl-phosphate syn 82.9 12 0.00039 27.3 9.7 92 50-156 24-129 (143)
68 3dlo_A Universal stress protei 82.5 11 0.00038 26.8 11.5 103 53-158 26-154 (155)
69 3ezs_A Aminotransferase ASPB; 82.5 17 0.00058 28.9 11.4 118 34-157 61-192 (376)
70 1k6d_A Acetate COA-transferase 82.5 12 0.00043 29.1 9.9 32 118-149 148-183 (220)
71 3dfz_A SIRC, precorrin-2 dehyd 82.3 3 0.0001 33.1 6.3 91 51-158 30-121 (223)
72 2ay1_A Aroat, aromatic amino a 82.3 13 0.00045 29.9 10.3 120 34-157 71-207 (394)
73 4f4e_A Aromatic-amino-acid ami 82.2 13 0.00045 30.5 10.5 119 35-157 95-233 (420)
74 3idf_A USP-like protein; unive 82.2 6.7 0.00023 26.8 7.5 61 94-158 72-137 (138)
75 7aat_A Aspartate aminotransfer 82.0 16 0.00055 29.5 10.8 120 34-157 73-213 (401)
76 3l8a_A METC, putative aminotra 81.9 19 0.00065 29.5 11.4 118 34-157 98-232 (421)
77 1lc5_A COBD, L-threonine-O-3-p 81.3 17 0.00057 29.0 10.6 114 34-157 61-184 (364)
78 3qhx_A Cystathionine gamma-syn 81.1 9.2 0.00031 31.6 9.2 112 38-157 68-186 (392)
79 2a8y_A 5'-methylthioadenosine 80.8 8.2 0.00028 31.2 8.5 69 59-159 136-210 (270)
80 1jeo_A MJ1247, hypothetical pr 80.5 6.8 0.00023 28.6 7.4 89 38-127 26-134 (180)
81 3c1o_A Eugenol synthase; pheny 80.3 8.2 0.00028 30.4 8.3 98 53-158 5-111 (321)
82 1lnq_A MTHK channels, potassiu 80.1 9.8 0.00033 30.8 8.8 90 52-159 115-209 (336)
83 2zc0_A Alanine glyoxylate tran 80.0 11 0.00037 30.5 9.2 119 34-157 77-213 (407)
84 2z08_A Universal stress protei 80.0 12 0.0004 25.6 9.2 37 118-158 99-136 (137)
85 3jtx_A Aminotransferase; NP_28 80.0 9.2 0.00032 30.8 8.6 119 34-157 68-206 (396)
86 3dyd_A Tyrosine aminotransfera 79.9 14 0.00047 30.6 9.9 119 34-157 98-229 (427)
87 1jw9_B Molybdopterin biosynthe 79.9 11 0.00036 29.8 8.8 98 52-159 31-153 (249)
88 3kgw_A Alanine-glyoxylate amin 79.8 13 0.00045 29.5 9.4 97 54-157 77-183 (393)
89 3f9t_A TDC, L-tyrosine decarbo 79.7 16 0.00056 28.8 10.0 112 38-157 71-206 (397)
90 4gud_A Imidazole glycerol phos 79.6 1.7 5.7E-05 33.1 3.8 72 78-159 4-79 (211)
91 1wta_A 5'-methylthioadenosine 79.5 12 0.00043 30.2 9.2 69 59-159 141-215 (275)
92 1ajs_A Aspartate aminotransfer 79.5 18 0.00062 29.3 10.3 120 34-157 76-221 (412)
93 1vp4_A Aminotransferase, putat 79.4 14 0.00048 30.4 9.7 119 34-157 87-226 (425)
94 3odg_A Xanthosine phosphorylas 79.2 5.8 0.0002 32.7 7.2 69 59-159 171-243 (287)
95 2dr1_A PH1308 protein, 386AA l 79.1 22 0.00075 28.2 12.2 115 36-157 53-181 (386)
96 2ord_A Acoat, acetylornithine 78.9 24 0.00082 28.5 11.1 118 35-157 81-222 (397)
97 3sho_A Transcriptional regulat 78.7 8.6 0.00029 28.2 7.5 61 93-160 57-122 (187)
98 3l5o_A Uncharacterized protein 78.7 6.1 0.00021 32.4 7.1 82 51-161 140-221 (270)
99 3uwc_A Nucleotide-sugar aminot 78.4 17 0.00057 29.0 9.7 110 38-157 40-157 (374)
100 3asa_A LL-diaminopimelate amin 78.1 19 0.00065 29.2 10.1 117 34-157 77-201 (400)
101 2jl1_A Triphenylmethane reduct 78.1 16 0.00055 28.0 9.2 100 54-160 2-106 (287)
102 3fuc_A Purine nucleoside phosp 78.1 8.6 0.00029 31.6 7.9 69 59-159 165-239 (284)
103 2yv1_A Succinyl-COA ligase [AD 78.1 4.6 0.00016 33.0 6.2 104 51-156 70-178 (294)
104 1sb8_A WBPP; epimerase, 4-epim 77.9 25 0.00084 28.1 10.7 110 51-160 26-152 (352)
105 1qe5_A Pentosyltransferase; en 77.9 9.5 0.00033 30.9 8.0 69 59-159 158-226 (266)
106 4hv4_A UDP-N-acetylmuramate--L 77.8 11 0.00036 32.8 8.8 86 50-156 20-109 (494)
107 2yrr_A Aminotransferase, class 77.7 7.6 0.00026 30.4 7.3 96 53-157 54-159 (353)
108 3hn7_A UDP-N-acetylmuramate-L- 77.7 13 0.00045 32.5 9.5 91 51-156 18-108 (524)
109 3m2p_A UDP-N-acetylglucosamine 77.5 20 0.0007 28.0 9.8 99 53-159 3-107 (311)
110 1svv_A Threonine aldolase; str 77.4 17 0.0006 28.4 9.4 118 35-157 48-182 (359)
111 1j32_A Aspartate aminotransfer 77.4 22 0.00077 28.4 10.2 118 34-157 69-201 (388)
112 3khs_A Purine nucleoside phosp 77.3 9.4 0.00032 31.3 7.9 70 58-159 161-236 (285)
113 2rfv_A Methionine gamma-lyase; 77.0 20 0.00068 29.2 9.9 116 36-157 64-184 (398)
114 2cb1_A O-acetyl homoserine sul 77.0 8.1 0.00028 32.0 7.6 114 37-157 57-175 (412)
115 2gn4_A FLAA1 protein, UDP-GLCN 76.9 14 0.00047 30.0 8.8 111 50-161 19-142 (344)
116 3lvm_A Cysteine desulfurase; s 76.9 28 0.00095 28.1 11.1 114 39-157 71-198 (423)
117 2bfw_A GLGA glycogen synthase; 76.5 19 0.00063 25.9 8.9 99 49-158 33-145 (200)
118 4id9_A Short-chain dehydrogena 76.4 13 0.00044 29.6 8.4 98 52-160 19-125 (347)
119 1g2o_A Purine nucleoside phosp 76.1 12 0.00042 30.3 8.2 68 60-159 160-227 (268)
120 1oi7_A Succinyl-COA synthetase 75.9 6 0.00021 32.2 6.3 104 51-156 64-172 (288)
121 3ele_A Amino transferase; RER0 75.8 29 0.001 27.8 10.7 117 35-157 79-216 (398)
122 3gpi_A NAD-dependent epimerase 75.7 6.8 0.00023 30.5 6.4 47 114-160 58-108 (286)
123 4e4t_A Phosphoribosylaminoimid 75.7 4.5 0.00015 34.4 5.7 77 48-129 31-107 (419)
124 1gd9_A Aspartate aminotransfer 75.4 28 0.00096 27.8 10.3 118 34-157 65-198 (389)
125 2yv2_A Succinyl-COA synthetase 75.2 6.1 0.00021 32.3 6.2 103 52-156 72-179 (297)
126 3rht_A (gatase1)-like protein; 74.8 2.9 0.0001 33.9 4.1 49 77-125 5-57 (259)
127 3fsl_A Aromatic-amino-acid ami 74.7 31 0.0011 27.6 11.9 119 35-157 73-211 (397)
128 3s2u_A UDP-N-acetylglucosamine 74.6 29 0.001 28.3 10.3 92 51-158 179-278 (365)
129 3enk_A UDP-glucose 4-epimerase 74.6 29 0.001 27.3 11.1 109 51-160 4-128 (341)
130 3ozb_A Methylthioadenosine pho 74.5 8.8 0.0003 31.0 6.9 69 59-159 146-219 (259)
131 3tqr_A Phosphoribosylglycinami 74.5 17 0.00057 28.6 8.4 70 55-127 10-92 (215)
132 3mt0_A Uncharacterized protein 74.4 28 0.00097 27.0 10.6 101 53-159 8-127 (290)
133 2ctz_A O-acetyl-L-homoserine s 74.4 18 0.00062 30.1 9.1 115 38-158 60-180 (421)
134 3rft_A Uronate dehydrogenase; 74.2 14 0.00049 28.5 8.0 101 52-161 3-111 (267)
135 1qgn_A Protein (cystathionine 74.0 38 0.0013 28.8 11.2 112 39-157 117-235 (445)
136 3ndn_A O-succinylhomoserine su 73.9 16 0.00055 30.6 8.7 116 35-157 80-201 (414)
137 1bw0_A TAT, protein (tyrosine 73.6 27 0.00091 28.3 9.8 119 34-157 77-215 (416)
138 2zyj_A Alpha-aminodipate amino 73.6 26 0.00089 28.2 9.7 117 34-157 76-201 (397)
139 1elu_A L-cysteine/L-cystine C- 73.6 23 0.00078 28.1 9.2 101 52-157 77-193 (390)
140 1tk9_A Phosphoheptose isomeras 73.3 7.3 0.00025 28.5 5.8 38 88-125 124-161 (188)
141 2a9v_A GMP synthase; structura 73.3 6.3 0.00021 30.3 5.5 80 76-159 13-92 (212)
142 2fq6_A Cystathionine beta-lyas 73.2 28 0.00097 29.2 10.1 115 37-157 83-204 (415)
143 1n8p_A Cystathionine gamma-lya 73.2 25 0.00084 29.0 9.6 111 39-157 58-177 (393)
144 1x92_A APC5045, phosphoheptose 73.2 6.2 0.00021 29.4 5.4 36 91-126 130-168 (199)
145 2wm3_A NMRA-like family domain 73.1 18 0.00061 28.2 8.3 105 52-159 5-113 (299)
146 3nra_A Aspartate aminotransfer 73.0 18 0.00061 29.1 8.5 117 35-157 81-217 (407)
147 1gc0_A Methionine gamma-lyase; 73.0 27 0.00093 28.5 9.8 114 37-157 66-185 (398)
148 2p4s_A Purine nucleoside phosp 72.8 13 0.00045 31.8 7.9 69 59-159 250-324 (373)
149 1tcv_A Purine-nucleoside phosp 72.8 10 0.00035 31.1 7.0 69 59-159 167-241 (287)
150 4ds3_A Phosphoribosylglycinami 72.7 18 0.0006 28.3 8.1 71 54-127 11-95 (209)
151 2dum_A Hypothetical protein PH 72.7 22 0.00077 25.1 9.6 63 94-160 84-156 (170)
152 3acz_A Methionine gamma-lyase; 72.6 20 0.00068 29.3 8.9 115 36-157 59-179 (389)
153 1vjo_A Alanine--glyoxylate ami 72.6 28 0.00097 27.8 9.6 115 36-157 67-194 (393)
154 2xhz_A KDSD, YRBH, arabinose 5 72.6 20 0.00069 26.0 8.1 62 93-161 67-132 (183)
155 3fxa_A SIS domain protein; str 72.5 4.3 0.00015 30.4 4.4 91 40-160 32-127 (201)
156 1mjh_A Protein (ATP-binding do 72.3 10 0.00036 26.6 6.2 63 94-160 89-159 (162)
157 3ri6_A O-acetylhomoserine sulf 72.3 26 0.00088 29.7 9.7 113 38-157 84-202 (430)
158 3tcm_A Alanine aminotransferas 72.2 27 0.00093 29.8 9.9 118 35-157 137-275 (500)
159 2g39_A Acetyl-COA hydrolase; c 72.1 19 0.00065 31.8 9.0 94 42-138 18-144 (497)
160 4egb_A DTDP-glucose 4,6-dehydr 72.1 18 0.00062 28.6 8.3 109 51-159 23-147 (346)
161 2g1u_A Hypothetical protein TM 71.8 24 0.00081 25.0 10.0 94 50-159 17-117 (155)
162 3etn_A Putative phosphosugar i 71.8 4.1 0.00014 31.5 4.1 62 92-160 76-143 (220)
163 3ffh_A Histidinol-phosphate am 71.6 30 0.001 27.3 9.5 112 35-157 70-192 (363)
164 2pb2_A Acetylornithine/succiny 71.5 41 0.0014 27.6 13.2 122 33-157 96-240 (420)
165 1qg8_A Protein (spore coat pol 71.4 19 0.00064 27.1 7.9 41 57-97 9-51 (255)
166 3a2b_A Serine palmitoyltransfe 71.4 34 0.0012 27.4 9.9 114 36-157 88-208 (398)
167 2ejb_A Probable aromatic acid 71.4 10 0.00035 29.1 6.4 11 74-84 28-38 (189)
168 3frk_A QDTB; aminotransferase, 71.3 18 0.00062 28.9 8.1 109 40-158 40-157 (373)
169 3b46_A Aminotransferase BNA3; 71.2 27 0.00091 29.0 9.4 117 35-157 98-239 (447)
170 3cis_A Uncharacterized protein 71.2 35 0.0012 26.7 10.1 55 101-159 100-160 (309)
171 1ka9_H Imidazole glycerol phos 71.1 17 0.00057 27.3 7.4 73 77-159 3-82 (200)
172 2nu8_A Succinyl-COA ligase [AD 71.1 8.5 0.00029 31.2 6.1 104 51-156 64-172 (288)
173 2zcu_A Uncharacterized oxidore 70.9 26 0.00088 26.8 8.7 98 55-161 2-104 (286)
174 2z5l_A Tylkr1, tylactone synth 70.7 38 0.0013 29.5 10.7 113 49-162 256-392 (511)
175 1yiz_A Kynurenine aminotransfe 70.6 34 0.0012 27.9 9.8 118 34-157 79-220 (429)
176 3ppl_A Aspartate aminotransfer 70.5 29 0.00099 28.4 9.4 117 35-157 81-220 (427)
177 2lpm_A Two-component response 70.5 7.3 0.00025 27.6 5.0 78 74-160 6-87 (123)
178 3hh1_A Tetrapyrrole methylase 70.4 13 0.00046 25.8 6.3 46 63-109 68-116 (117)
179 2iss_D Glutamine amidotransfer 70.4 8.4 0.00029 29.3 5.6 76 75-159 19-98 (208)
180 3mad_A Sphingosine-1-phosphate 70.4 16 0.00055 31.1 8.0 113 39-158 142-275 (514)
181 1cs1_A CGS, protein (cystathio 70.3 41 0.0014 27.1 10.7 113 38-157 54-172 (386)
182 1d2f_A MALY protein; aminotran 70.1 40 0.0014 26.9 11.4 118 34-157 65-200 (390)
183 1m3s_A Hypothetical protein YC 69.9 6.7 0.00023 28.8 4.9 39 88-126 93-131 (186)
184 1ek6_A UDP-galactose 4-epimera 69.8 31 0.0011 27.2 9.2 103 53-161 3-132 (348)
185 4ffc_A 4-aminobutyrate aminotr 69.8 13 0.00043 31.4 7.1 123 33-157 104-264 (453)
186 1vim_A Hypothetical protein AF 69.7 5.7 0.0002 30.0 4.5 39 88-126 103-141 (200)
187 3ez1_A Aminotransferase MOCR f 69.7 22 0.00075 29.0 8.4 117 35-157 73-212 (423)
188 3oks_A 4-aminobutyrate transam 69.6 34 0.0012 28.6 9.8 123 33-157 101-266 (451)
189 2fr1_A Erythromycin synthase, 69.6 33 0.0011 29.6 9.9 113 48-162 222-362 (486)
190 1jkx_A GART;, phosphoribosylgl 69.6 29 0.001 26.9 8.7 71 54-127 4-88 (212)
191 2yva_A DNAA initiator-associat 69.4 9.4 0.00032 28.2 5.6 37 89-125 124-163 (196)
192 4gqb_A Protein arginine N-meth 69.4 8.7 0.0003 35.1 6.3 68 53-123 359-433 (637)
193 3ip3_A Oxidoreductase, putativ 69.2 17 0.00056 29.5 7.5 90 54-157 4-96 (337)
194 2xhz_A KDSD, YRBH, arabinose 5 69.2 7.5 0.00026 28.4 5.0 48 79-126 101-148 (183)
195 3l4e_A Uncharacterized peptida 69.1 9.6 0.00033 29.5 5.8 106 54-159 4-120 (206)
196 3nmy_A Xometc, cystathionine g 69.0 23 0.00079 29.5 8.6 111 38-157 69-187 (400)
197 3aow_A Putative uncharacterize 68.8 50 0.0017 27.5 11.1 119 34-157 120-255 (448)
198 3phb_E Purine nucleoside phosp 68.7 17 0.0006 30.4 7.6 70 58-159 199-274 (324)
199 1gy8_A UDP-galactose 4-epimera 68.6 41 0.0014 27.1 9.8 24 137-160 120-143 (397)
200 2oas_A ATOA, 4-hydroxybutyrate 68.3 11 0.00039 32.5 6.6 97 42-138 9-130 (436)
201 3dhn_A NAD-dependent epimerase 68.3 22 0.00076 26.2 7.6 102 53-160 5-111 (227)
202 2e7j_A SEP-tRNA:Cys-tRNA synth 68.2 42 0.0014 26.4 11.7 104 46-157 64-182 (371)
203 3hdj_A Probable ornithine cycl 68.1 27 0.00093 28.6 8.6 94 43-142 110-215 (313)
204 3nnk_A Ureidoglycine-glyoxylat 68.1 44 0.0015 26.6 10.7 112 39-157 49-173 (411)
205 1tvm_A PTS system, galactitol- 68.0 9.9 0.00034 26.5 5.2 54 75-128 20-79 (113)
206 3f0h_A Aminotransferase; RER07 68.0 43 0.0015 26.4 11.1 113 38-157 54-179 (376)
207 3zrp_A Serine-pyruvate aminotr 68.0 26 0.0009 27.6 8.4 97 54-157 57-162 (384)
208 3cwc_A Putative glycerate kina 67.9 4.5 0.00015 34.9 3.9 45 115-161 284-328 (383)
209 3osu_A 3-oxoacyl-[acyl-carrier 67.9 14 0.00048 28.3 6.5 108 51-159 3-139 (246)
210 3sho_A Transcriptional regulat 67.9 8.6 0.0003 28.2 5.1 40 87-126 100-139 (187)
211 3rq1_A Aminotransferase class 67.9 44 0.0015 27.1 9.9 119 34-157 82-224 (418)
212 3qp9_A Type I polyketide synth 67.7 22 0.00077 31.1 8.5 115 48-164 247-405 (525)
213 1xi9_A Putative transaminase; 67.2 44 0.0015 27.0 9.8 118 34-157 80-212 (406)
214 1e5e_A MGL, methionine gamma-l 67.2 41 0.0014 27.7 9.7 112 36-157 66-183 (404)
215 2o0m_A Transcriptional regulat 67.0 10 0.00035 31.3 5.9 93 36-129 122-246 (345)
216 3trj_A Phosphoheptose isomeras 66.9 8.7 0.0003 29.2 5.1 32 93-124 133-167 (201)
217 1lss_A TRK system potassium up 66.9 26 0.0009 23.6 8.9 92 52-158 4-100 (140)
218 3fdx_A Putative filament prote 66.9 27 0.00092 23.7 8.8 36 118-158 106-142 (143)
219 2gb3_A Aspartate aminotransfer 66.6 38 0.0013 27.5 9.3 118 34-157 81-212 (409)
220 3e48_A Putative nucleoside-dip 66.5 16 0.00056 28.2 6.7 100 54-160 2-105 (289)
221 1meo_A Phosophoribosylglycinam 66.4 24 0.00082 27.4 7.6 71 54-127 4-88 (209)
222 2x4g_A Nucleoside-diphosphate- 66.3 39 0.0013 26.5 9.1 101 53-159 14-124 (342)
223 2rjn_A Response regulator rece 66.1 23 0.00079 24.2 6.9 79 75-161 6-88 (154)
224 3st7_A Capsular polysaccharide 65.9 21 0.00072 28.8 7.5 72 87-158 10-91 (369)
225 3ilh_A Two component response 65.5 27 0.00093 23.3 7.5 58 54-111 37-102 (146)
226 1m32_A 2-aminoethylphosphonate 65.5 46 0.0016 25.9 10.4 115 35-157 40-166 (366)
227 1e6u_A GDP-fucose synthetase; 65.4 26 0.0009 27.3 7.8 24 137-160 83-106 (321)
228 2xbl_A Phosphoheptose isomeras 65.4 8.2 0.00028 28.5 4.6 38 88-125 130-167 (198)
229 3loq_A Universal stress protei 65.4 45 0.0016 25.8 11.1 103 54-160 173-290 (294)
230 2qbu_A Precorrin-2 methyltrans 65.4 23 0.00078 27.0 7.3 51 65-116 85-138 (232)
231 2huf_A Alanine glyoxylate amin 65.4 50 0.0017 26.2 10.3 98 53-157 72-179 (393)
232 3e2y_A Kynurenine-oxoglutarate 65.3 51 0.0018 26.4 10.3 117 35-157 64-205 (410)
233 3bcv_A Putative glycosyltransf 65.2 23 0.00078 26.2 7.1 16 118-133 113-128 (240)
234 2fp4_A Succinyl-COA ligase [GD 65.1 13 0.00044 30.5 6.1 104 51-156 71-180 (305)
235 1xr4_A Putative citrate lyase 64.9 42 0.0014 29.7 9.7 116 42-157 49-202 (509)
236 4a6r_A Omega transaminase; tra 64.8 52 0.0018 27.4 10.0 122 34-157 92-258 (459)
237 3da8_A Probable 5'-phosphoribo 64.8 21 0.00072 28.0 7.0 69 56-127 18-98 (215)
238 1vl0_A DTDP-4-dehydrorhamnose 64.8 19 0.00065 27.8 6.8 24 136-159 89-112 (292)
239 1orr_A CDP-tyvelose-2-epimeras 64.8 14 0.00047 29.2 6.1 104 54-158 3-122 (347)
240 2lpm_A Two-component response 64.7 4.8 0.00016 28.6 3.0 44 65-109 43-87 (123)
241 1m3s_A Hypothetical protein YC 64.7 17 0.00059 26.5 6.2 61 93-161 55-115 (186)
242 3gk7_A 4-hydroxybutyrate COA-t 64.5 39 0.0013 29.5 9.3 97 42-138 14-135 (448)
243 3vps_A TUNA, NAD-dependent epi 64.4 16 0.00053 28.4 6.2 24 137-160 95-118 (321)
244 1pff_A Methionine gamma-lyase; 64.4 48 0.0017 25.8 9.8 98 53-157 15-119 (331)
245 3kcq_A Phosphoribosylglycinami 64.1 27 0.00093 27.3 7.6 71 54-127 12-91 (215)
246 4eb5_A Probable cysteine desul 64.1 51 0.0017 25.9 10.8 99 53-157 62-172 (382)
247 1fg7_A Histidinol phosphate am 63.9 42 0.0014 26.8 8.9 115 34-157 60-183 (356)
248 1iay_A ACC synthase 2, 1-amino 63.7 53 0.0018 26.7 9.7 118 34-157 85-226 (428)
249 2yva_A DNAA initiator-associat 63.7 41 0.0014 24.6 9.3 39 116-161 107-145 (196)
250 2ydy_A Methionine adenosyltran 63.7 30 0.001 26.9 7.8 99 52-160 2-110 (315)
251 2o8r_A Polyphosphate kinase; s 63.7 11 0.00037 35.0 5.8 45 63-107 385-432 (705)
252 2dou_A Probable N-succinyldiam 63.6 54 0.0018 26.0 10.8 117 35-157 66-196 (376)
253 1cb0_A Protein (5'-deoxy-5'-me 63.6 37 0.0013 27.2 8.5 20 140-159 197-216 (283)
254 2hj0_A Putative citrate lyase, 63.5 25 0.00085 31.2 8.0 116 42-158 52-206 (519)
255 1qkk_A DCTD, C4-dicarboxylate 63.3 29 0.00099 23.7 7.0 78 76-161 3-84 (155)
256 2ark_A Flavodoxin; FMN, struct 63.3 27 0.00093 25.7 7.2 81 78-160 6-96 (188)
257 3ndc_A Precorrin-4 C(11)-methy 63.1 35 0.0012 27.0 8.2 69 47-116 46-120 (264)
258 3cai_A Possible aminotransfera 63.0 57 0.0019 26.1 10.5 101 52-157 87-200 (406)
259 3etn_A Putative phosphosugar i 62.8 12 0.00042 28.7 5.2 39 88-126 120-160 (220)
260 3fxa_A SIS domain protein; str 62.8 7.2 0.00024 29.2 3.8 38 89-126 107-144 (201)
261 3nyt_A Aminotransferase WBPE; 62.4 44 0.0015 26.6 8.8 105 41-159 40-157 (367)
262 2o0r_A RV0858C (N-succinyldiam 62.4 60 0.0021 26.2 11.5 118 34-157 64-198 (411)
263 2b69_A UDP-glucuronate decarbo 62.4 16 0.00056 29.0 6.1 106 52-159 27-140 (343)
264 1b5p_A Protein (aspartate amin 62.4 59 0.002 26.1 9.8 119 34-157 70-202 (385)
265 3gt7_A Sensor protein; structu 62.4 29 0.001 23.9 6.9 79 75-161 6-90 (154)
266 1hdo_A Biliverdin IX beta redu 62.3 33 0.0011 24.6 7.4 101 53-159 4-109 (206)
267 4gek_A TRNA (CMO5U34)-methyltr 62.2 17 0.00059 28.6 6.2 85 38-124 57-145 (261)
268 3qli_A Coenzyme A transferase; 62.2 21 0.00072 31.3 7.2 105 32-137 17-159 (455)
269 4f6c_A AUSA reductase domain p 61.9 42 0.0015 27.6 8.8 108 52-160 69-197 (427)
270 2nv0_A Glutamine amidotransfer 61.9 16 0.00054 27.2 5.6 74 78-160 3-80 (196)
271 1o4s_A Aspartate aminotransfer 61.8 61 0.0021 26.0 9.8 118 34-157 80-212 (389)
272 2i2w_A Phosphoheptose isomeras 61.7 12 0.00042 28.3 5.0 46 79-124 136-181 (212)
273 1vim_A Hypothetical protein AF 61.7 9 0.00031 28.8 4.2 88 43-161 38-125 (200)
274 2zay_A Response regulator rece 61.6 29 0.00099 23.4 6.6 80 74-161 6-91 (147)
275 3p9x_A Phosphoribosylglycinami 61.3 39 0.0013 26.4 8.0 71 54-127 6-90 (211)
276 1qo0_D AMIR; binding protein, 61.2 15 0.00052 26.6 5.3 77 75-161 11-88 (196)
277 2ch1_A 3-hydroxykynurenine tra 61.2 60 0.0021 25.7 10.5 97 54-157 72-178 (396)
278 3dr4_A Putative perosamine syn 61.1 57 0.002 26.1 9.3 109 36-158 60-177 (391)
279 3hvy_A Cystathionine beta-lyas 61.1 33 0.0011 29.2 8.1 117 35-157 73-217 (427)
280 3ua3_A Protein arginine N-meth 61.1 21 0.00071 33.4 7.2 86 38-123 393-500 (745)
281 3ke3_A Putative serine-pyruvat 60.8 64 0.0022 25.9 11.6 116 37-158 36-174 (379)
282 2r85_A PURP protein PF1517; AT 60.8 22 0.00077 28.0 6.6 21 89-109 12-32 (334)
283 3sc6_A DTDP-4-dehydrorhamnose 60.7 16 0.00056 28.1 5.7 25 136-160 82-106 (287)
284 3ruy_A Ornithine aminotransfer 60.7 62 0.0021 25.8 10.1 119 36-157 78-221 (392)
285 1v2d_A Glutamine aminotransfer 60.5 62 0.0021 25.7 10.5 116 34-157 63-190 (381)
286 3cog_A Cystathionine gamma-lya 60.3 46 0.0016 27.4 8.8 110 40-157 71-187 (403)
287 3ius_A Uncharacterized conserv 60.1 48 0.0016 25.3 8.3 94 53-159 6-101 (286)
288 3nhm_A Response regulator; pro 60.0 34 0.0012 22.5 7.7 56 51-110 26-86 (133)
289 3ly1_A Putative histidinol-pho 60.0 60 0.002 25.4 10.4 111 40-157 55-178 (354)
290 2z5b_A Protein YPL144W, DMP1; 60.0 4.1 0.00014 30.8 1.9 27 138-164 98-124 (151)
291 1gpw_B Amidotransferase HISH; 60.0 32 0.0011 25.6 7.1 71 78-159 2-84 (201)
292 1q7r_A Predicted amidotransfer 59.9 9.8 0.00033 29.2 4.2 78 76-160 23-102 (219)
293 1wl8_A GMP synthase [glutamine 59.8 37 0.0013 24.9 7.4 75 79-160 3-80 (189)
294 3rsc_A CALG2; TDP, enediyne, s 59.8 29 0.001 28.1 7.3 18 142-159 130-147 (415)
295 1i1q_B Anthranilate synthase c 59.7 43 0.0015 24.8 7.8 75 78-159 2-83 (192)
296 3i16_A Aluminum resistance pro 59.6 43 0.0015 28.4 8.6 118 34-157 71-217 (427)
297 1g0o_A Trihydroxynaphthalene r 59.5 30 0.001 26.9 7.1 107 51-158 28-161 (283)
298 3h2s_A Putative NADH-flavin re 59.5 13 0.00044 27.5 4.7 99 54-159 2-104 (224)
299 1pjq_A CYSG, siroheme synthase 59.3 38 0.0013 29.0 8.3 94 51-159 11-104 (457)
300 1rpn_A GDP-mannose 4,6-dehydra 59.2 18 0.00062 28.5 5.8 110 51-160 13-137 (335)
301 3oh8_A Nucleoside-diphosphate 58.8 31 0.001 29.7 7.6 48 113-160 196-253 (516)
302 3auf_A Glycinamide ribonucleot 58.7 55 0.0019 25.7 8.5 71 54-127 24-110 (229)
303 2z1d_A Hydrogenase expression/ 58.5 26 0.0009 30.0 6.9 47 109-159 181-227 (372)
304 2e0n_A Precorrin-2 C20-methylt 58.4 36 0.0012 26.6 7.4 55 61-116 83-140 (259)
305 1wv2_A Thiazole moeity, thiazo 58.3 70 0.0024 26.1 9.2 111 43-158 63-193 (265)
306 4dqv_A Probable peptide synthe 58.3 69 0.0024 27.1 9.7 109 50-160 71-214 (478)
307 3dxv_A Alpha-amino-epsilon-cap 58.3 15 0.00052 30.2 5.4 122 34-157 84-240 (439)
308 1y1p_A ARII, aldehyde reductas 58.2 63 0.0022 25.1 9.1 111 49-161 8-132 (342)
309 3mc6_A Sphingosine-1-phosphate 58.2 40 0.0014 28.2 8.1 113 38-157 109-241 (497)
310 3ll9_A Isopentenyl phosphate k 58.0 28 0.00096 27.8 6.8 126 33-159 24-179 (269)
311 2qr3_A Two-component system re 58.0 32 0.0011 22.8 6.2 82 77-161 4-89 (140)
312 4f6l_B AUSA reductase domain p 57.9 37 0.0013 28.9 8.0 111 51-162 149-280 (508)
313 2q9u_A A-type flavoprotein; fl 57.9 77 0.0026 26.0 10.2 83 76-160 256-349 (414)
314 1qdl_B Protein (anthranilate s 57.9 38 0.0013 25.2 7.2 75 79-159 4-84 (195)
315 3vax_A Putative uncharacterize 57.9 69 0.0024 25.4 10.8 114 39-157 66-194 (400)
316 1poi_B Glutaconate coenzyme A- 57.7 33 0.0011 27.6 7.2 92 36-136 6-116 (260)
317 3i42_A Response regulator rece 57.6 37 0.0013 22.2 6.6 77 77-161 4-86 (127)
318 3sc4_A Short chain dehydrogena 57.4 64 0.0022 25.2 8.8 110 51-161 8-152 (285)
319 3f6p_A Transcriptional regulat 57.4 37 0.0013 22.1 7.3 76 78-161 4-82 (120)
320 3cvj_A Putative phosphoheptose 57.3 17 0.00058 28.1 5.2 35 90-124 124-169 (243)
321 3kto_A Response regulator rece 57.3 30 0.001 23.1 6.1 80 76-161 6-89 (136)
322 2gm3_A Unknown protein; AT3G01 57.0 39 0.0013 23.9 6.9 62 94-159 93-162 (175)
323 2ywj_A Glutamine amidotransfer 56.9 54 0.0019 23.9 8.4 70 78-159 2-75 (186)
324 2nvv_A Acetyl-COA hydrolase/tr 56.8 43 0.0015 29.5 8.3 96 43-138 9-139 (506)
325 3d3u_A 4-hydroxybutyrate COA-t 56.7 19 0.00065 31.0 5.9 95 42-137 14-135 (439)
326 1nvm_B Acetaldehyde dehydrogen 56.6 47 0.0016 27.1 8.1 95 53-163 5-108 (312)
327 3u9l_A 3-oxoacyl-[acyl-carrier 56.4 64 0.0022 26.0 8.8 109 51-160 4-145 (324)
328 3cdk_A Succinyl-COA:3-ketoacid 56.3 72 0.0025 25.1 10.6 32 118-149 151-186 (241)
329 2j48_A Two-component sensor ki 56.3 30 0.001 21.8 5.6 76 78-161 3-84 (119)
330 3i4j_A Aminotransferase, class 56.1 55 0.0019 26.7 8.5 123 33-157 69-230 (430)
331 2hmt_A YUAA protein; RCK, KTN, 56.0 43 0.0015 22.5 9.4 92 52-158 6-102 (144)
332 1xq6_A Unknown protein; struct 56.0 58 0.002 24.0 8.0 104 51-160 3-132 (253)
333 2pln_A HP1043, response regula 55.8 42 0.0014 22.3 7.7 75 75-161 17-95 (137)
334 3rrl_B Succinyl-COA:3-ketoacid 55.7 7.1 0.00024 30.6 2.7 94 38-137 2-111 (207)
335 2q1s_A Putative nucleotide sug 55.7 36 0.0012 27.5 7.2 104 51-160 31-150 (377)
336 2z1m_A GDP-D-mannose dehydrata 55.5 25 0.00085 27.6 6.0 106 52-158 3-124 (345)
337 3m3p_A Glutamine amido transfe 55.4 22 0.00075 28.3 5.7 81 78-159 5-89 (250)
338 3kcn_A Adenylate cyclase homol 55.4 33 0.0011 23.4 6.1 59 50-111 25-86 (151)
339 1ex2_A Protein MAF; structural 55.3 47 0.0016 25.5 7.4 93 55-158 5-104 (189)
340 3i5t_A Aminotransferase; pyrid 55.3 68 0.0023 27.1 9.1 123 33-157 94-260 (476)
341 1cbf_A Cobalt-precorrin-4 tran 55.2 31 0.001 27.6 6.6 52 64-116 83-137 (285)
342 1smk_A Malate dehydrogenase, g 55.1 72 0.0025 25.9 9.0 102 53-157 9-121 (326)
343 3slg_A PBGP3 protein; structur 55.1 17 0.00059 29.2 5.1 104 52-159 24-140 (372)
344 2oat_A Ornithine aminotransfer 55.1 90 0.0031 25.9 10.3 117 38-157 120-262 (439)
345 4b8w_A GDP-L-fucose synthase; 55.0 29 0.001 26.5 6.3 25 136-160 88-112 (319)
346 2c5a_A GDP-mannose-3', 5'-epim 54.9 57 0.002 26.3 8.3 103 52-160 29-144 (379)
347 3ffr_A Phosphoserine aminotran 54.9 70 0.0024 24.8 8.6 110 38-157 45-166 (362)
348 4es6_A Uroporphyrinogen-III sy 54.9 18 0.00062 28.0 5.1 48 55-109 188-239 (254)
349 3kvo_A Hydroxysteroid dehydrog 54.8 86 0.0029 25.6 9.4 109 51-160 44-187 (346)
350 3kkj_A Amine oxidase, flavin-c 54.7 8.5 0.00029 27.5 2.8 18 90-107 14-31 (336)
351 2ahu_A Putative enzyme YDIF; C 54.3 1.2E+02 0.0039 26.9 13.3 42 118-159 180-226 (531)
352 1bvy_F Protein (cytochrome P45 54.2 23 0.00078 26.8 5.4 73 85-159 30-110 (191)
353 3d6k_A Putative aminotransfera 54.1 67 0.0023 26.2 8.7 118 34-157 78-218 (422)
354 1y8q_A Ubiquitin-like 1 activa 54.1 92 0.0031 25.7 11.8 104 44-159 29-157 (346)
355 3s2u_A UDP-N-acetylglucosamine 54.1 38 0.0013 27.6 7.1 30 125-158 92-121 (365)
356 3fvs_A Kynurenine--oxoglutarat 53.8 49 0.0017 26.7 7.7 117 35-157 70-212 (422)
357 2o8r_A Polyphosphate kinase; s 53.8 14 0.00049 34.2 4.8 61 45-110 336-406 (705)
358 3ia7_A CALG4; glycosysltransfe 53.8 36 0.0012 27.1 6.8 18 142-159 114-131 (402)
359 3e9k_A Kynureninase; kynurenin 53.8 51 0.0017 27.3 8.0 102 51-158 128-250 (465)
360 1x92_A APC5045, phosphoheptose 53.6 63 0.0022 23.7 9.5 39 116-161 111-149 (199)
361 4e16_A Precorrin-4 C(11)-methy 53.6 41 0.0014 26.3 7.0 51 65-116 68-121 (253)
362 2r2n_A Kynurenine/alpha-aminoa 53.5 90 0.0031 25.4 12.9 118 35-157 81-229 (425)
363 2z9v_A Aspartate aminotransfer 53.2 82 0.0028 24.9 11.5 99 52-157 60-169 (392)
364 2x5d_A Probable aminotransfera 53.2 88 0.003 25.2 10.1 118 34-157 77-210 (412)
365 3kht_A Response regulator; PSI 53.1 39 0.0013 22.7 6.1 78 76-161 5-90 (144)
366 3piu_A 1-aminocyclopropane-1-c 52.8 89 0.003 25.4 9.2 117 35-157 89-229 (435)
367 1ja9_A 4HNR, 1,3,6,8-tetrahydr 52.8 28 0.00095 26.5 5.8 100 51-151 20-144 (274)
368 1id1_A Putative potassium chan 52.8 56 0.0019 22.8 10.2 95 52-157 3-103 (153)
369 1xgk_A Nitrogen metabolite rep 52.7 78 0.0027 25.6 8.8 102 52-161 5-113 (352)
370 3mw8_A Uroporphyrinogen-III sy 52.6 12 0.00042 28.7 3.7 49 55-110 175-228 (240)
371 3eh7_A 4-hydroxybutyrate COA-t 52.6 18 0.0006 31.4 5.0 114 42-157 18-157 (434)
372 1edo_A Beta-keto acyl carrier 52.5 34 0.0012 25.5 6.2 107 52-159 1-136 (244)
373 2fnu_A Aminotransferase; prote 52.5 58 0.002 25.6 7.8 109 35-157 35-153 (375)
374 3tqx_A 2-amino-3-ketobutyrate 52.4 85 0.0029 24.8 10.6 111 38-157 90-210 (399)
375 1ibj_A CBL, cystathionine beta 52.4 64 0.0022 27.4 8.5 113 37-157 134-252 (464)
376 4dad_A Putative pilus assembly 52.4 49 0.0017 22.2 6.5 79 75-161 19-104 (146)
377 3i1j_A Oxidoreductase, short c 52.1 53 0.0018 24.6 7.2 110 51-161 13-154 (247)
378 1iz0_A Quinone oxidoreductase; 52.0 59 0.002 25.5 7.8 51 49-105 123-174 (302)
379 3l86_A Acetylglutamate kinase; 51.9 45 0.0016 27.0 7.1 120 40-159 54-212 (279)
380 3vp6_A Glutamate decarboxylase 51.8 1.1E+02 0.0036 26.3 9.9 115 38-159 137-285 (511)
381 2rhc_B Actinorhodin polyketide 51.8 47 0.0016 25.8 7.1 99 51-151 21-144 (277)
382 3k5i_A Phosphoribosyl-aminoimi 51.8 12 0.00041 31.4 3.7 77 49-129 21-97 (403)
383 3r0j_A Possible two component 51.8 73 0.0025 23.9 8.1 79 75-161 22-104 (250)
384 1tq8_A Hypothetical protein RV 51.5 62 0.0021 22.9 9.9 66 94-163 87-161 (163)
385 2cy8_A D-phgat, D-phenylglycin 51.5 46 0.0016 27.5 7.3 121 33-157 94-240 (453)
386 3p9z_A Uroporphyrinogen III co 51.5 21 0.00072 27.4 4.9 48 54-109 163-210 (229)
387 2x5o_A UDP-N-acetylmuramoylala 51.4 34 0.0012 28.9 6.6 69 52-127 5-73 (439)
388 1zud_1 Adenylyltransferase THI 51.2 85 0.0029 24.5 10.9 104 45-159 22-150 (251)
389 3q2o_A Phosphoribosylaminoimid 51.1 12 0.00043 30.8 3.7 41 48-89 10-50 (389)
390 4hvk_A Probable cysteine desul 51.1 85 0.0029 24.4 11.5 113 39-157 46-172 (382)
391 4eu9_A Succinyl-COA:acetate co 51.0 96 0.0033 27.1 9.6 96 42-137 17-147 (514)
392 2ri0_A Glucosamine-6-phosphate 50.9 69 0.0023 24.4 7.8 87 39-126 15-126 (234)
393 3oy2_A Glycosyltransferase B73 50.9 39 0.0013 27.1 6.6 97 52-158 184-303 (413)
394 3r5x_A D-alanine--D-alanine li 50.6 16 0.00055 28.7 4.2 41 89-129 23-66 (307)
395 1kyq_A Met8P, siroheme biosynt 50.5 18 0.00061 29.4 4.5 30 51-80 12-42 (274)
396 4eez_A Alcohol dehydrogenase 1 50.1 22 0.00076 28.5 5.0 40 48-87 160-199 (348)
397 3t18_A Aminotransferase class 50.0 99 0.0034 24.8 10.0 118 35-157 82-223 (413)
398 3tnj_A Universal stress protei 50.0 58 0.002 22.2 10.0 39 118-160 109-147 (150)
399 2bkw_A Alanine-glyoxylate amin 49.9 91 0.0031 24.4 12.5 100 52-157 60-174 (385)
400 1db3_A GDP-mannose 4,6-dehydra 49.9 91 0.0031 24.6 8.7 106 53-159 2-130 (372)
401 3h5i_A Response regulator/sens 49.8 55 0.0019 21.9 7.2 79 76-161 5-87 (140)
402 2hq1_A Glucose/ribitol dehydro 49.8 59 0.002 24.2 7.2 56 52-107 5-60 (247)
403 1ve2_A Uroporphyrin-III C-meth 49.7 46 0.0016 25.5 6.6 49 66-115 70-121 (235)
404 4da9_A Short-chain dehydrogena 49.7 88 0.003 24.3 8.4 76 51-126 28-115 (280)
405 3mje_A AMPHB; rossmann fold, o 49.7 95 0.0033 27.0 9.3 108 53-161 240-375 (496)
406 1xdp_A Polyphosphate kinase; P 49.7 15 0.00053 33.8 4.3 26 48-73 334-361 (687)
407 4e5v_A Putative THUA-like prot 49.4 55 0.0019 26.4 7.2 79 75-159 3-93 (281)
408 2ywd_A Glutamine amidotransfer 49.4 45 0.0015 24.3 6.3 62 91-159 15-81 (191)
409 3sxp_A ADP-L-glycero-D-mannohe 49.3 34 0.0012 27.4 6.0 109 51-159 9-137 (362)
410 3cnb_A DNA-binding response re 49.3 47 0.0016 21.9 6.0 79 75-161 7-93 (143)
411 1a9x_B Carbamoyl phosphate syn 49.2 39 0.0013 28.7 6.5 74 77-159 191-268 (379)
412 3jyo_A Quinate/shikimate dehyd 49.0 1E+02 0.0035 24.7 8.8 71 51-123 126-199 (283)
413 3l7n_A Putative uncharacterize 48.9 58 0.002 25.0 7.1 82 78-159 2-91 (236)
414 3mos_A Transketolase, TK; thia 48.9 82 0.0028 28.3 8.9 66 90-160 513-587 (616)
415 1u08_A Hypothetical aminotrans 48.6 1E+02 0.0034 24.5 11.5 118 34-157 69-201 (386)
416 5nul_A Flavodoxin; electron tr 48.5 18 0.00061 25.1 3.7 66 93-160 19-87 (138)
417 2qzj_A Two-component response 48.5 58 0.002 21.7 6.6 77 77-161 5-84 (136)
418 4b4o_A Epimerase family protei 48.4 48 0.0016 25.6 6.6 19 137-155 82-100 (298)
419 3orq_A N5-carboxyaminoimidazol 48.4 15 0.00052 30.4 3.8 75 48-127 8-82 (377)
420 1v72_A Aldolase; PLP-dependent 48.2 93 0.0032 24.0 8.5 117 36-157 43-178 (356)
421 3rkr_A Short chain oxidoreduct 48.2 59 0.002 24.9 7.0 110 51-161 28-166 (262)
422 2qxy_A Response regulator; reg 48.1 58 0.002 21.6 7.0 76 77-161 5-84 (142)
423 2a5l_A Trp repressor binding p 48.1 35 0.0012 24.9 5.5 46 113-160 66-116 (200)
424 3uow_A GMP synthetase; structu 47.9 44 0.0015 29.7 6.9 79 77-159 8-90 (556)
425 2p5x_A ASMTL, N-acetylserotoni 47.9 74 0.0025 25.1 7.6 95 55-158 6-113 (230)
426 3tsa_A SPNG, NDP-rhamnosyltran 47.8 48 0.0016 26.5 6.7 18 142-159 125-142 (391)
427 3jvi_A Protein tyrosine phosph 47.7 25 0.00084 26.0 4.5 69 59-127 16-92 (161)
428 2v03_A Cysteine synthase B; py 47.6 1E+02 0.0036 24.5 8.7 58 48-109 57-115 (303)
429 2ybo_A Methyltransferase; SUMT 47.6 59 0.002 26.1 7.2 49 67-116 95-146 (294)
430 2dgk_A GAD-beta, GADB, glutama 47.5 1.2E+02 0.004 25.0 10.8 112 38-157 83-228 (452)
431 3if2_A Aminotransferase; YP_26 47.3 23 0.00079 29.0 4.8 121 34-157 85-244 (444)
432 1uc8_A LYSX, lysine biosynthes 47.1 57 0.002 24.7 6.8 28 81-108 4-31 (280)
433 3cg0_A Response regulator rece 47.1 47 0.0016 21.9 5.7 80 75-161 8-91 (140)
434 2r5f_A Transcriptional regulat 46.9 70 0.0024 25.3 7.4 102 38-141 40-174 (264)
435 3ehe_A UDP-glucose 4-epimerase 46.9 46 0.0016 25.8 6.3 101 54-160 3-113 (313)
436 3fg9_A Protein of universal st 46.9 68 0.0023 22.1 10.9 101 54-158 18-155 (156)
437 2dc1_A L-aspartate dehydrogena 46.8 43 0.0015 25.5 6.0 22 142-163 92-113 (236)
438 2qvg_A Two component response 46.7 61 0.0021 21.5 6.3 78 76-161 7-98 (143)
439 2okj_A Glutamate decarboxylase 46.6 1.3E+02 0.0045 25.3 10.8 114 39-157 135-280 (504)
440 2ae2_A Protein (tropinone redu 46.6 65 0.0022 24.5 7.0 107 51-159 8-144 (260)
441 3ax6_A Phosphoribosylaminoimid 46.5 23 0.00079 28.9 4.6 70 54-128 3-72 (380)
442 3afn_B Carbonyl reductase; alp 46.5 88 0.003 23.3 8.4 76 51-126 6-93 (258)
443 1n2s_A DTDP-4-, DTDP-glucose o 46.4 77 0.0026 24.2 7.5 25 136-160 80-104 (299)
444 2xci_A KDO-transferase, 3-deox 46.4 1.1E+02 0.0038 24.8 8.8 73 75-157 224-307 (374)
445 3trj_A Phosphoheptose isomeras 46.4 90 0.0031 23.3 10.0 39 116-161 112-150 (201)
446 2gkg_A Response regulator homo 46.4 53 0.0018 21.0 5.7 75 77-158 6-86 (127)
447 1z7d_A Ornithine aminotransfer 46.2 1.2E+02 0.0042 24.9 11.3 121 35-157 106-251 (433)
448 3ay3_A NAD-dependent epimerase 46.2 44 0.0015 25.4 6.0 96 54-160 4-109 (267)
449 1oc2_A DTDP-glucose 4,6-dehydr 46.2 26 0.0009 27.6 4.8 107 53-159 5-124 (348)
450 3eod_A Protein HNR; response r 46.0 60 0.002 21.2 8.0 78 76-161 7-88 (130)
451 3dod_A Adenosylmethionine-8-am 45.9 1.2E+02 0.004 25.0 9.0 123 33-157 84-250 (448)
452 2vyc_A Biodegradative arginine 45.9 76 0.0026 29.1 8.4 81 78-161 2-94 (755)
453 3oid_A Enoyl-[acyl-carrier-pro 45.8 46 0.0016 25.6 6.1 57 51-107 3-59 (258)
454 1nri_A Hypothetical protein HI 45.8 41 0.0014 27.2 6.0 32 93-124 159-190 (306)
455 1u2p_A Ptpase, low molecular w 45.7 30 0.001 25.5 4.7 67 59-127 16-91 (163)
456 2oga_A Transaminase; PLP-depen 45.6 1E+02 0.0036 24.7 8.5 108 40-157 67-183 (399)
457 3snk_A Response regulator CHEY 45.5 30 0.001 23.1 4.4 79 75-161 13-96 (135)
458 1wyu_A Glycine dehydrogenase ( 45.5 91 0.0031 25.6 8.2 100 53-159 127-232 (438)
459 3op7_A Aminotransferase class 45.4 1.1E+02 0.0038 24.1 10.6 116 35-157 66-192 (375)
460 1jr2_A Uroporphyrinogen-III sy 45.3 27 0.00094 27.6 4.8 48 55-109 213-265 (286)
461 1jmv_A USPA, universal stress 45.3 67 0.0023 21.5 9.9 36 119-160 103-138 (141)
462 3h4t_A Glycosyltransferase GTF 45.3 53 0.0018 26.9 6.7 16 145-160 109-124 (404)
463 4gx0_A TRKA domain protein; me 45.3 95 0.0032 26.8 8.6 89 52-157 127-222 (565)
464 4fzr_A SSFS6; structural genom 45.2 41 0.0014 27.1 5.9 16 144-159 136-151 (398)
465 1d1q_A Tyrosine phosphatase (E 45.1 33 0.0011 25.1 4.9 68 59-127 19-96 (161)
466 1ydg_A Trp repressor binding p 45.0 41 0.0014 24.9 5.5 46 112-159 72-122 (211)
467 3hmu_A Aminotransferase, class 45.0 90 0.0031 26.3 8.3 121 35-157 98-262 (472)
468 1vef_A Acetylornithine/acetyl- 45.0 1.2E+02 0.0039 24.2 11.5 119 34-157 85-224 (395)
469 3olq_A Universal stress protei 44.9 70 0.0024 24.8 7.1 62 95-160 80-150 (319)
470 2i2w_A Phosphoheptose isomeras 44.8 85 0.0029 23.4 7.4 23 139-161 145-167 (212)
471 2fz5_A Flavodoxin; alpha/beta 44.7 69 0.0024 21.5 7.9 65 94-160 21-88 (137)
472 3cis_A Uncharacterized protein 44.7 1.1E+02 0.0037 23.8 11.6 102 54-159 174-305 (309)
473 2ixa_A Alpha-N-acetylgalactosa 44.6 1.4E+02 0.0048 25.0 10.5 94 53-157 21-120 (444)
474 2pzm_A Putative nucleotide sug 44.6 38 0.0013 26.7 5.5 107 51-160 19-135 (330)
475 4es6_A Uroporphyrinogen-III sy 44.6 28 0.00096 26.9 4.6 55 47-109 54-112 (254)
476 3nut_A Precorrin-3 methylase; 44.5 74 0.0025 24.8 7.1 60 66-126 70-142 (251)
477 3h1g_A Chemotaxis protein CHEY 44.4 63 0.0022 21.2 6.0 37 74-110 49-90 (129)
478 3gju_A Putative aminotransfera 44.4 1.3E+02 0.0046 24.8 10.3 122 34-157 93-260 (460)
479 2f00_A UDP-N-acetylmuramate--L 44.4 96 0.0033 26.5 8.4 63 53-126 20-86 (491)
480 1ae1_A Tropinone reductase-I; 44.1 59 0.002 25.1 6.5 96 51-148 20-141 (273)
481 1rkx_A CDP-glucose-4,6-dehydra 44.1 50 0.0017 26.2 6.2 109 51-160 8-131 (357)
482 1jg8_A L-ALLO-threonine aldola 44.0 1.1E+02 0.0038 23.7 8.7 115 36-157 42-171 (347)
483 3av3_A Phosphoribosylglycinami 44.0 1.1E+02 0.0036 23.5 7.9 70 55-127 8-91 (212)
484 3is3_A 17BETA-hydroxysteroid d 44.0 49 0.0017 25.5 6.0 56 52-107 18-73 (270)
485 1eq2_A ADP-L-glycero-D-mannohe 44.0 1E+02 0.0036 23.4 8.3 102 55-159 2-115 (310)
486 3gk3_A Acetoacetyl-COA reducta 43.9 98 0.0033 23.7 7.8 77 50-126 23-111 (269)
487 3n8i_A Low molecular weight ph 43.8 28 0.00095 25.7 4.2 70 59-128 17-94 (157)
488 1vmk_A Purine nucleoside phosp 43.6 40 0.0014 27.4 5.5 19 141-159 218-236 (277)
489 3nzo_A UDP-N-acetylglucosamine 43.5 81 0.0028 26.0 7.6 110 51-161 34-165 (399)
490 3qgu_A LL-diaminopimelate amin 43.5 88 0.003 25.5 7.8 116 35-157 114-247 (449)
491 3nkl_A UDP-D-quinovosamine 4-d 43.2 74 0.0025 21.7 6.4 92 52-158 4-98 (141)
492 2fcj_A Small toprim domain pro 43.2 45 0.0015 23.9 5.1 48 50-100 25-73 (119)
493 1p3d_A UDP-N-acetylmuramate--a 42.9 1E+02 0.0035 26.2 8.4 64 52-126 18-85 (475)
494 1s4d_A Uroporphyrin-III C-meth 42.9 60 0.002 25.8 6.5 48 67-115 85-135 (280)
495 1xq1_A Putative tropinone redu 42.9 38 0.0013 25.8 5.1 107 51-159 13-149 (266)
496 1va0_A Uroporphyrin-III C-meth 42.8 66 0.0023 24.7 6.5 50 65-115 66-118 (239)
497 2pju_A Propionate catabolism o 42.7 1E+02 0.0035 24.0 7.7 46 53-100 14-61 (225)
498 3icc_A Putative 3-oxoacyl-(acy 42.7 68 0.0023 24.1 6.5 57 51-107 6-62 (255)
499 4ggj_A Mitochondrial cardiolip 42.6 36 0.0012 25.6 4.9 54 55-109 64-119 (196)
500 3sju_A Keto reductase; short-c 42.6 56 0.0019 25.4 6.2 100 49-150 21-145 (279)
No 1
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=100.00 E-value=7e-41 Score=287.79 Aligned_cols=129 Identities=22% Similarity=0.268 Sum_probs=125.0
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchH
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAM 112 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav 112 (165)
...++++|++++.++|++|++|||||+|+||+.+|+.|++ |++|+|||+||||.+||+.+|++|.+.||||++|+|+++
T Consensus 124 ~~~~~~~I~~~g~~~I~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~Dsa~ 203 (338)
T 3a11_A 124 SEKALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAA 203 (338)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGT
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEehHHH
Confidence 3567999999999999999999999999999999999998 799999999999999999999999999999999999999
Q ss_pred HHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 113 FGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 113 ~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
+++|++||+|++|||+|++||+++||+|||++|++||+|+|||||+||+.
T Consensus 204 ~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~a~~~ 253 (338)
T 3a11_A 204 RHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETY 253 (338)
T ss_dssp TTTGGGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEECCGG
T ss_pred HHHHHhCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEecccc
Confidence 99999999999999999999999999999999999999999999999974
No 2
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=283.24 Aligned_cols=127 Identities=23% Similarity=0.395 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~ 113 (165)
+.++++|++++.++|++|++|||||+|+||+.+|..|++ |++|+|||+|+||.+||.+||++|.+.||||++|+|++++
T Consensus 105 ~~a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Dsa~~ 184 (315)
T 3ecs_A 105 SLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAAVG 184 (315)
T ss_dssp TTHHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehhHHH
Confidence 566899999999999999999999999999999999987 8999999999999999999999999999999999999999
Q ss_pred HhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 114 ~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
++|++||+|++|||+|++||+++||+||+++|++||+++|||||+||+
T Consensus 185 ~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 185 YIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp HHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEecc
Confidence 999999999999999999999999999999999999999999999987
No 3
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=100.00 E-value=3.6e-39 Score=278.00 Aligned_cols=129 Identities=19% Similarity=0.272 Sum_probs=123.4
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCH--------HHHHHHHHHHh-CCceEEEEecCCCCChHH-HHHHHHhhcCCc
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSK--------IVELFLKNAAQ-HRKFQCIVMENSPENKGH-ELAVSLAKSKIQ 103 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~--------tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~ 103 (165)
...++++|++++.++|++|++|||||+|. |++.+|..|++ |++|+|||+||||.+||. .+|++|.+.|||
T Consensus 131 ~~~~~~~I~~~g~~~I~~g~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~ 210 (347)
T 1t9k_A 131 DIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGIE 210 (347)
T ss_dssp HHHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCccHHHHHHHHHHHCCCeEEEEEeCCCCccccHHHHHHHHHhCCCC
Confidence 35678999999999999999999999999 99999999998 799999999999999997 479999999999
Q ss_pred eEEEccchHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 104 TVLIPDSAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 104 v~~I~dsav~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
|++|+|++++++|++ ||+|++|||+|++||+++||+|||++|++||+|+|||||+||+.
T Consensus 211 vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vPfyV~ap~~ 271 (347)
T 1t9k_A 211 VYVITDNMAGWLMKRGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVS 271 (347)
T ss_dssp EEEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred EEEEehhHHHHHhhcCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccc
Confidence 999999999999988 99999999999999999999999999999999999999999864
No 4
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=100.00 E-value=1.8e-38 Score=275.94 Aligned_cols=129 Identities=21% Similarity=0.255 Sum_probs=122.2
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCC--------HHHHHHHHHHHh-CCceEEEEecCCCCChHH-HHHHHHhhcCCc
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYS--------KIVELFLKNAAQ-HRKFQCIVMENSPENKGH-ELAVSLAKSKIQ 103 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S--------~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~ 103 (165)
...++++|++++.++|++|++||||++| +|++.+|+.|++ |++|+|||+||||.+||. .+|++|.+.|||
T Consensus 156 ~~~~~~~I~~~g~~~I~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qG~rltA~eL~~~GIp 235 (374)
T 2yvk_A 156 DEETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGID 235 (374)
T ss_dssp HHHHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCCcHHHHHHHHHHHcCCEEEEEEeCCCCccccHHHHHHHHHHcCCC
Confidence 3567999999999999999999999866 589999999998 799999999999999996 579999999999
Q ss_pred eEEEccchHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 104 TVLIPDSAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 104 v~~I~dsav~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
|++|+|++++++|++ ||+|++|||+|++||+++||+|||++|++||+|+|||||+||+.
T Consensus 236 vtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~ 296 (374)
T 2yvk_A 236 VTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLS 296 (374)
T ss_dssp EEEECGGGHHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred EEEEehhHHHHHhhhcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccc
Confidence 999999999999998 99999999999999999999999999999999999999999964
No 5
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=100.00 E-value=4e-38 Score=271.88 Aligned_cols=128 Identities=20% Similarity=0.311 Sum_probs=120.9
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCC--------HHHHHHHHHHHh-CCceEEEEecCCCCChHH-HHHHHHhhcCCc
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYS--------KIVELFLKNAAQ-HRKFQCIVMENSPENKGH-ELAVSLAKSKIQ 103 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S--------~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~ 103 (165)
...++++|++++.++|++|++||||++| +|++.+|..|++ |++|+|||+||||.+||. .+|++|.+.|||
T Consensus 129 ~~~~~~~I~~~g~~~I~~g~~ILThcnsg~lat~g~gtal~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~ 208 (351)
T 1t5o_A 129 DVERNRKMGEYGAELLEDGDVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVIACETRPLNQGSRLTCWELMEDGID 208 (351)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEECSCCSSSSSSSSCSHHHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCCccccccCCChHHHHHHHHHHCCCEEEEEEeCCCcccccHHHHHHHHHhCCCC
Confidence 3567999999999999999999999865 589999999998 799999999999999996 469999999999
Q ss_pred eEEEccchHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 104 TVLIPDSAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 104 v~~I~dsav~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
|++|+|++++++|++ ||+|++|||+|++|| ++||+|||++|++||+|+|||||+||+.
T Consensus 209 vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG-v~NKiGT~~lAl~Ak~~~vPfyV~a~~~ 268 (351)
T 1t5o_A 209 VTLITDSMVGIVMQKGMVDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPFYVAAPKA 268 (351)
T ss_dssp EEEECGGGHHHHHHTTCCSEEEECCSEEETTE-EEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred EEEEehhHHHHHhhcCCCCEEEECccchhhcC-cccccCHHHHHHHHHHcCCCEEEeCccc
Confidence 999999999999988 999999999999999 9999999999999999999999999974
No 6
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=100.00 E-value=4.3e-38 Score=274.28 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=122.5
Q ss_pred ChHHHHHHHHHHhcccC--------CCCEEEEecCC--------HHHHHHHHHHHh-CCceEEEEecCCCCChHH-HHHH
Q psy2575 34 ANPTSDTAPSQACEHIH--------SNEIILTLGYS--------KIVELFLKNAAQ-HRKFQCIVMENSPENKGH-ELAV 95 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~--------~~~~ILT~g~S--------~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~-~la~ 95 (165)
...++++|++++.++|+ +|++||||++| +|++.+|+.|++ |++|+|||+||||.+||. .+|+
T Consensus 152 ~~~~~~~I~~~g~~~I~~~~~~~~~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qGarltA~ 231 (383)
T 2a0u_A 152 DVAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVY 231 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCCEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCccchHHHHHH
Confidence 35679999999999999 99999999876 699999999998 799999999999999996 5799
Q ss_pred HHhhcCCceEEEccchHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 96 SLAKSKIQTVLIPDSAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 96 ~L~~~GI~v~~I~dsav~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
+|.+.||||++|+|++++++|++ ||+||+|||+|++||+++||+|||++|++||+|+|||||+||+.
T Consensus 232 eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~ 300 (383)
T 2a0u_A 232 ECVQEDIPCTLICDGAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTT 300 (383)
T ss_dssp HHHHTTCCEEEECGGGHHHHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred HHHHcCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEeCCcc
Confidence 99999999999999999999998 99999999999999999999999999999999999999999964
No 7
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=100.00 E-value=1e-36 Score=255.28 Aligned_cols=128 Identities=24% Similarity=0.353 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~ 113 (165)
...+++|+++++++|++|++||||++|+|++.+|+.|++ +++|+||++||||.+||+.+|++|.+.||+|++|+|++++
T Consensus 93 ~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~dsa~~ 172 (276)
T 1vb5_A 93 EEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQMG 172 (276)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcHHHHH
Confidence 567999999999999999999999999999999999987 7999999999999999999999999999999999999999
Q ss_pred HhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 114 ~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
++|+++|+||+|||+|.+||+++||+||+++|++||++++||||+||++
T Consensus 173 ~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~ 221 (276)
T 1vb5_A 173 LFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETY 221 (276)
T ss_dssp HHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred HHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEecccc
Confidence 9999999999999999999999999999999999999999999999875
No 8
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=99.97 E-value=7e-31 Score=209.93 Aligned_cols=89 Identities=24% Similarity=0.340 Sum_probs=85.7
Q ss_pred CCceEEEEecCCCCChHHH-HHHHHhhcCCceEEEccchHHHhchh----CCEEEEccceeecCCCeeehhcHHHHHHHH
Q psy2575 74 HRKFQCIVMENSPENKGHE-LAVSLAKSKIQTVLIPDSAMFGLISR----VNKIIIGTHTVMANGGLRSVCGTHAVALAA 148 (165)
Q Consensus 74 ~~~f~ViV~Es~P~~eG~~-la~~L~~~GI~v~~I~dsav~~~m~~----v~~VllGAd~V~~nG~vvnk~GT~~lAl~A 148 (165)
+|+|+|||+||||.+||.+ +|++|.+.||+|++|+|++++++|++ ||+||+|||+|++||+++||+||+++|++|
T Consensus 2 ~k~~~V~v~EsRP~~qG~rlta~eL~~~gI~vtlI~Dsa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~A 81 (191)
T 1w2w_B 2 PRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVIC 81 (191)
T ss_dssp CEEEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHH
T ss_pred CcEEEEEEcCCCCccccHHHHHHHHHHcCCCEEEEechHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHH
Confidence 5789999999999999975 69999999999999999999999998 999999999999999999999999999999
Q ss_pred hhCCCcEEEEeecc
Q psy2575 149 QHYSIPYPCTFLLN 162 (165)
Q Consensus 149 k~~~vPv~V~~~~~ 162 (165)
|+|+|||||+||+.
T Consensus 82 k~~~vPf~V~a~~~ 95 (191)
T 1w2w_B 82 KQFGIKFFVVAPKT 95 (191)
T ss_dssp HHHTCEEEEECCGG
T ss_pred HHcCCCEEEecccc
Confidence 99999999999964
No 9
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=98.34 E-value=1.9e-06 Score=70.83 Aligned_cols=113 Identities=19% Similarity=0.077 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhc-ccCCCCEEEEecCCHHHHHHHHHHHhC---C---ceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 35 NPTSDTAPSQACE-HIHSNEIILTLGYSKIVELFLKNAAQH---R---KFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 35 ~~~~~~Ia~~a~~-~I~~~~~ILT~g~S~tV~~~L~~A~~~---~---~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
..+++.|++.|++ +|++|++|. .|.++|+..+.....+. + +++++ + .+...+..|.+.|+++..+
T Consensus 10 ~~~K~~iA~~Aa~~~I~dg~~Ig-LgsGST~~~~~~~L~~~~~~~~l~~itvV-T------nS~~~a~~l~~~gi~v~~l 81 (244)
T 2f8m_A 10 DSLKKIVAYKAVDEYVQSNMTIG-LGTGSTVFYVLERIDNLLKSGKLKDVVCI-P------TSIDTELKARKLGIPLTTL 81 (244)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEE-ECCSTTTHHHHHHHHHHHHHTSSCSCEEE-E------SSHHHHHHHHHHTCCBCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhccCCCCEEEE-C------CcHHHHHHHHHCCCeEEEe
Confidence 4668999999999 999999998 56666888877766431 2 56653 3 2456788888889998766
Q ss_pred ccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHH-HhhCCCcEEEEeec
Q psy2575 108 PDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALA-AQHYSIPYPCTFLL 161 (165)
Q Consensus 108 ~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~-Ak~~~vPv~V~~~~ 161 (165)
. .++++|+.|.|||.|-++++++..-|-..+--. .-....-+|+++..
T Consensus 82 ~------~~~~iD~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~ 130 (244)
T 2f8m_A 82 E------KHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDE 130 (244)
T ss_dssp C------SSCCBSEEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEG
T ss_pred c------ccCcCCEEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEEC
Confidence 2 455899999999999999877776666555542 33455566777654
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=98.33 E-value=1.8e-06 Score=70.09 Aligned_cols=112 Identities=12% Similarity=0.033 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhC---C--c-eEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQH---R--K-FQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~---~--~-f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
...++.|++.|+++|++|++|..-+. +|+..+.....+. + + ++| |+- +...+..|.+.|+++..+.
T Consensus 6 ~~~K~~IA~~Aa~~I~dg~~I~LgsG-ST~~~~~~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~v~~l~ 77 (227)
T 1uj6_A 6 ESYKKEAAHAAIAYVQDGMVVGLGTG-STARYAVLELARRLREGELKGVVG-VPT------SRATEELAKREGIPLVDLP 77 (227)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEECCS-HHHHHHHHHHHHHHHTTSSCSCEE-EES------SHHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEcCC-HHHHHHHHHHhhhhhhcCCCCEEE-ECC------cHHHHHHHHhCCCeEEEcC
Confidence 45689999999999999999986554 5777777665432 2 4 776 443 4678888888899988772
Q ss_pred cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHH--HHHhhCCCcEEEEeecc
Q psy2575 109 DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVA--LAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 109 dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~~~~~ 162 (165)
+ .++|+.|+|||.|-.++......|...+- ++++. ...+|+++..+
T Consensus 78 ~-------~~~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~-a~~~ivlaD~s 125 (227)
T 1uj6_A 78 P-------EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERV-AKEFIVIADHT 125 (227)
T ss_dssp T-------TCEEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHT-EEEEEEEEEGG
T ss_pred C-------CcCCEEEECCCccCccccEECCHHHHHHHHHHHHhc-cCCEEEEEEcc
Confidence 2 47999999999999988444455555553 44442 34778887653
No 11
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=98.27 E-value=4.8e-06 Score=67.69 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhC---C---ceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQH---R---KFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~---~---~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
...++.|++.|+++|++|++|. .+.++|+..+.....+. + +++|+ + .+...+..|.+.|+++..+.
T Consensus 4 ~~~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~~a~~L~~~~~~~~l~~itvV-T------nS~~~a~~l~~~gi~vi~l~ 75 (229)
T 1lk5_A 4 EEMKKIAAKEALKFIEDDMVIG-LGTGSTTAYFIKLLGEKLKRGEISDIVGV-P------TSYQAKLLAIEHDIPIASLD 75 (229)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHTTSSCSCEEE-E------SSHHHHHHHHHTTCCBCCGG
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhhccCCCEEEE-C------CcHHHHHHHHhCCCeEEEeC
Confidence 3568899999999999999998 56677888887766432 3 56663 3 24567888888898876542
Q ss_pred cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHH--HHHhhCCCcEEEEeec
Q psy2575 109 DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVA--LAAQHYSIPYPCTFLL 161 (165)
Q Consensus 109 dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~~~~ 161 (165)
.+.++|+.|+|||.|-.++++...-|-..+- +++ ....-+|+++..
T Consensus 76 ------~~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~-~~A~~~ivlaD~ 123 (229)
T 1lk5_A 76 ------QVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIE-YRAGTFIVLVDE 123 (229)
T ss_dssp ------GCSCEEEEEECCSEECTTCCEECCTTSCHHHHHHHH-HTEEEEEEEEEG
T ss_pred ------CcccCCEEEECCCeECCCCCeecCHHHHHHHHHHHH-HhcCCeEEEEch
Confidence 2368999999999999887766544444433 222 233356666654
No 12
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=98.24 E-value=4.2e-06 Score=67.62 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCC-ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHR-KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~-~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~ 113 (165)
...++.|++.|+++|++|++|. .+.++|+..+.....+.+ +++|.|+- +...+..|++.|+++..+.
T Consensus 4 ~~~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTn------S~~~a~~l~~~gi~vi~l~----- 71 (219)
T 1m0s_A 4 LEMKKLAAQAALQYVKADRIVG-VGSGSTVNCFIEALGTIKDKIQGAVAA------SKESEELLRKQGIEVFNAN----- 71 (219)
T ss_dssp HHHHHHHHHHHGGGCCTTSEEE-ECCSHHHHHHHHHHHTTGGGSCEEEES------SHHHHHHHHHTTCCBCCGG-----
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECC------hHHHHHHHHhCCCeEEEeC-----
Confidence 3568899999999999999998 566778888888775433 67773442 4567888888898876542
Q ss_pred HhchhCCEEEEccceeecCCCeeehhcHHHHH--HHHhhCCCcEEEEeec
Q psy2575 114 GLISRVNKIIIGTHTVMANGGLRSVCGTHAVA--LAAQHYSIPYPCTFLL 161 (165)
Q Consensus 114 ~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~~~~ 161 (165)
.+.++|+.|+|||.|-.++++...-|-..+- ++++.. .-+|+++..
T Consensus 72 -~~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A-~~~ivlaD~ 119 (219)
T 1m0s_A 72 -DVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALA-KKFICIVDS 119 (219)
T ss_dssp -GCSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHE-EEEEEEEEG
T ss_pred -ccccCCEEEECcCeECCCCCeecCHHHHHHHHHHHHHhc-CcEEEEEeC
Confidence 2268999999999999887765544433333 233222 255666544
No 13
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=98.01 E-value=1.6e-05 Score=64.57 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhC-CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQH-RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF 113 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~-~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~ 113 (165)
.+.++.|++.|+++|++|++|.. |.++|+..++....+. +++++.|+- +.+.+..|++.||++..+.+
T Consensus 10 ~~~K~~iA~~A~~~V~~g~~Igl-gsGST~~~~i~~L~~~~~~itv~Vtn------S~~~a~~l~~~gi~l~~l~~---- 78 (224)
T 3kwm_A 10 DELKKLAATEAAKSITTEITLGV-GTGSTVGFLIEELVNYRDKIKTVVSS------SEDSTRKLKALGFDVVDLNY---- 78 (224)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEE-CCSHHHHHHHHHGGGCTTTEEEEEES------CHHHHHHHHHTTCCBCCHHH----
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHhhcCceEEEECC------cHHHHHHHHHcCCeEEecCc----
Confidence 45688999999999999998775 6666888888877653 467775553 34678888889998765422
Q ss_pred HhchhCCEEEEccceeecCCCeeehhcH
Q psy2575 114 GLISRVNKIIIGTHTVMANGGLRSVCGT 141 (165)
Q Consensus 114 ~~m~~v~~VllGAd~V~~nG~vvnk~GT 141 (165)
..++|+.|.|||.|-++++++---|.
T Consensus 79 --~~~iD~afdGADevd~~~~liKGgg~ 104 (224)
T 3kwm_A 79 --AGEIDLYIDGADECNNHKELIKGGGA 104 (224)
T ss_dssp --HCSEEEEEECCSEECTTSCEECCSSS
T ss_pred --cccccEEEECCCccccccCeecCchh
Confidence 36899999999999999877664443
No 14
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=97.96 E-value=1.8e-05 Score=65.62 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHhc-ccC--CCCEEEEecCCHHHHHHHHHHHhC--C--------ceEEEEecCCCCChHHHHHHHHhhcC
Q psy2575 35 NPTSDTAPSQACE-HIH--SNEIILTLGYSKIVELFLKNAAQH--R--------KFQCIVMENSPENKGHELAVSLAKSK 101 (165)
Q Consensus 35 ~~~~~~Ia~~a~~-~I~--~~~~ILT~g~S~tV~~~L~~A~~~--~--------~f~ViV~Es~P~~eG~~la~~L~~~G 101 (165)
...++.|++.|++ +|+ +|++|. +|.++|+..+.....+. + +++|+ + .+...+..|.+.|
T Consensus 19 ~~~K~~IA~~Aa~~~I~~~dg~~Ig-LgsGST~~~~a~~L~~~~~~~~l~~~~~~itvV-T------nS~~~a~~l~~~g 90 (264)
T 1xtz_A 19 EDAKRAAAYRAVDENLKFDDHKIIG-IGSGSTVVYVAERIGQYLHDPKFYEVASKFICI-P------TGFQSRNLILDNK 90 (264)
T ss_dssp CHHHHHHHHHHHHHHCCTTTCCEEE-ECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEEE-E------SSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCEEE-EcChHHHHHHHHHHhHhhhccccccccCCEEEE-C------CcHHHHHHHHHCC
Confidence 4568999999998 999 999998 45555777777766531 1 36653 3 2456788888889
Q ss_pred CceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHH-HhhCCCcEEEEeec
Q psy2575 102 IQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALA-AQHYSIPYPCTFLL 161 (165)
Q Consensus 102 I~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~-Ak~~~vPv~V~~~~ 161 (165)
+++..+. .+.++|+.|+|||.|-.+++++..-|-..+--. ......-+|+++..
T Consensus 91 i~v~~l~------~~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~ 145 (264)
T 1xtz_A 91 LQLGSIE------QYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADS 145 (264)
T ss_dssp CEECCTT------TCCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEG
T ss_pred CeEEEeh------hcCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEc
Confidence 8876552 236899999999999998777666665554432 33344566777654
No 15
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=97.95 E-value=5e-05 Score=62.74 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh----CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ----HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~----~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds 110 (165)
+..++.|++.|+++|++|++|.. |.++|+..++....+ +.++++ |+ .+.+.+..|++.||++..+.+
T Consensus 25 ~e~K~~iA~~A~~~V~dg~vIgL-GsGST~~~~i~~L~~~~~~gl~Itv-Vt------tS~~ta~~l~~~GI~l~~l~~- 95 (255)
T 3hhe_A 25 QQLKKMAALKALEFVEDDMRLGI-GSGSTVNEFIPLLGERVANGLRVTC-VA------TSQYSEQLCHKFGVPISTLEK- 95 (255)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEE-CCSHHHHHHHHHHHHHHHTTCCEEE-EE------SSHHHHHHHHHTTCCBCCTTT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHHhhccCCcEEE-Ec------CCHHHHHHHHHcCCcEEeccc-
Confidence 45688999999999999997765 666688888876654 124443 22 234568888889999775533
Q ss_pred hHHHhchhCCEEEEccceeecCCCeeehhc
Q psy2575 111 AMFGLISRVNKIIIGTHTVMANGGLRSVCG 140 (165)
Q Consensus 111 av~~~m~~v~~VllGAd~V~~nG~vvnk~G 140 (165)
++++|+.|.|||.|-++.+++---|
T Consensus 96 -----~~~iD~afdGADeVD~~~~lIKGgG 120 (255)
T 3hhe_A 96 -----IPELDLDIDGADEIGPEMTLIKGGG 120 (255)
T ss_dssp -----CCSBSEEEECCSEECGGGCEECCTT
T ss_pred -----ccccCEEEECCCccccccCeeeCch
Confidence 4589999999999999877765333
No 16
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=97.89 E-value=5.7e-05 Score=61.29 Aligned_cols=92 Identities=13% Similarity=0.050 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-----CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-----HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS 110 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-----~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds 110 (165)
..++.|+..|+++|++|++|..- .++|+..++....+ +.++++ |+- +.+.+..|.+.||++..+.+
T Consensus 3 ~~K~~iA~~A~~~V~dg~vIgLG-sGST~~~~i~~L~~~~~~~~~~i~~-Vtt------S~~t~~~l~~~Gi~l~~l~~- 73 (225)
T 3l7o_A 3 ELKKIAGVRAAQYVEDGMIVGLG-TGSTAYYFVEEVGRRVQEEGLQVIG-VTT------SSRTTAQAQALGIPLKSIDE- 73 (225)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEC-CSTTHHHHHHHHHHHHHHHCCCCEE-EES------SHHHHHHHHHHTCCBCCGGG-
T ss_pred HHHHHHHHHHHHhCCCCCEEEEC-CcHHHHHHHHHHHHhhhhcCCCEEE-EcC------CHHHHHHHhccCceEEecCc-
Confidence 56889999999999999988764 45577777765544 345665 332 34567788888998865432
Q ss_pred hHHHhchhCCEEEEccceeecCCCeeehhcH
Q psy2575 111 AMFGLISRVNKIIIGTHTVMANGGLRSVCGT 141 (165)
Q Consensus 111 av~~~m~~v~~VllGAd~V~~nG~vvnk~GT 141 (165)
..++|+.|.|||.|-++.+++---|.
T Consensus 74 -----~~~iD~a~dGADevd~~~~liKGgG~ 99 (225)
T 3l7o_A 74 -----VDSVDVTVDGADEVDPNFNGIKGGGG 99 (225)
T ss_dssp -----SSCEEEEEECCSEECTTSCEECCTTS
T ss_pred -----ccccCEEEEcCCccCcccCeecCchh
Confidence 46899999999999999887664443
No 17
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=97.89 E-value=3.4e-06 Score=68.19 Aligned_cols=112 Identities=10% Similarity=0.095 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCC-ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHR-KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG 114 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~-~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~ 114 (165)
..++.|++.|+++|++|++|.. +.++|+..+.....+.+ +++|.|+-|-+ .+..|++.|+++..+ .
T Consensus 5 ~~K~~IA~~Aa~lI~dg~~I~L-dsGST~~~la~~L~~~~~~itv~VTnS~~------~a~~l~~~gi~vi~l--~---- 71 (219)
T 1o8b_A 5 ELKKAVGWAALQYVQPGTIVGV-GTGSTAAHFIDALGTMKGQIEGAVSSSDA------STEKLKSLGIHVFDL--N---- 71 (219)
T ss_dssp ------------------CEEE-CCSCC---------------CCEEESCCC------------------CCG--G----
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-cChHHHHHHHHHHhccCCCEEEEECCcHH------HHHHHHhCCCeEEEe--C----
Confidence 4578999999999999999985 55557777777664422 56664554432 455666667776554 2
Q ss_pred hchhCCEEEEccceeecCCCeeehhcHHHHH--HHHhhCCCcEEEEeec
Q psy2575 115 LISRVNKIIIGTHTVMANGGLRSVCGTHAVA--LAAQHYSIPYPCTFLL 161 (165)
Q Consensus 115 ~m~~v~~VllGAd~V~~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~~~~ 161 (165)
.+.++|+.|+|||.|-.++++...-|-..+- ++++.. .-+|+++..
T Consensus 72 ~~~~~D~af~Gadgid~~~~~~~~~~~a~~kekiv~~~A-~~~ivlaD~ 119 (219)
T 1o8b_A 72 EVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVA-EKFICIADA 119 (219)
T ss_dssp GCSCEEEEEECCSEECTTSCEECCCCC-HHHHHHHHHHE-EEEEEEEEG
T ss_pred ccCcCCEEEECcceECCCCCeecCHHHHHHHHHHHHHhc-CcEEEEEeC
Confidence 2368999999999999988776443444433 233222 245665543
No 18
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=97.86 E-value=8.2e-05 Score=60.38 Aligned_cols=91 Identities=15% Similarity=0.124 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-----CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-----HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-----~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
+..++.|++.|+++|++|++|.. +.++|+..++....+ +.+++++ + .+.+.+..|.+.||++.-+.+
T Consensus 4 ~~~K~~iA~~A~~~I~~g~~Igl-gsGST~~~~~~~L~~~~~~~~l~itvV-t------nS~~~a~~l~~~gi~v~~l~~ 75 (226)
T 2pjm_A 4 EDLKLKVAKEAVKLVKDGMVIGL-GTGSTAALFIRELGNRIREEELTVFGI-P------TSFEAKMLAMQYEIPLVTLDE 75 (226)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEEE-CCSHHHHHHHHHHHHHHHHHTCCCEEE-E------SSHHHHHHHHHTTCCBCCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCEEEE-CCCHHHHHHHHHHHhhhhccCCcEEEE-e------CcHHHHHHHHhcCCeEEeecc
Confidence 46688999999999999998776 556688777766544 2255543 2 244577888899998763221
Q ss_pred chHHHhchhCCEEEEccceeecC-CCeeehhc
Q psy2575 110 SAMFGLISRVNKIIIGTHTVMAN-GGLRSVCG 140 (165)
Q Consensus 110 sav~~~m~~v~~VllGAd~V~~n-G~vvnk~G 140 (165)
++ +|+.|.|||.|-++ ++++---|
T Consensus 76 ------~~-iD~afdGaDevd~~t~~likGgg 100 (226)
T 2pjm_A 76 ------YD-VDIAFDGADEVEETTLFLIKGGG 100 (226)
T ss_dssp ------CC-CSEEEECCSEEETTTCCEECCTT
T ss_pred ------cc-CCEEEEcCceeccccCceeeccc
Confidence 34 99999999999999 77655444
No 19
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=97.49 E-value=0.0002 Score=58.63 Aligned_cols=90 Identities=12% Similarity=0.187 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHhcccCC----CCEEEEecCCHHHHHHHHHHHhC-CceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEHIHS----NEIILTLGYSKIVELFLKNAAQH-RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~----~~~ILT~g~S~tV~~~L~~A~~~-~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
+..++.+++.|+++|++ |++|.. |.++|+..++....+. ++++..|+ .+.+.+..|.+.||++..+.+
T Consensus 12 ~~~K~~aA~~A~~~V~d~~~~g~vIGL-GtGST~~~~i~~L~~~~~~i~~~V~------tS~~t~~~~~~~Gi~l~~l~~ 84 (239)
T 3uw1_A 12 DELKRLVGEAAARYVTDNVPQGAVIGV-GTGSTANCFIDALAAVKDRYRGAVS------SSVATTERLKSHGIRVFDLNE 84 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEEEE-CCSHHHHHHHHHHHTTGGGSCEEEE------SSHHHHHHHHHTTCCBCCGGG
T ss_pred HHHHHHHHHHHHHHhhccCcCCCEEEE-CccHHHHHHHHHHHhhhccceEEeC------CcHHHHHHHHHcCCcEEeccc
Confidence 45688999999999998 887665 6666989888877652 35554444 245678888899998864332
Q ss_pred chHHHhchhCCEEEEccceeecCCCeee
Q psy2575 110 SAMFGLISRVNKIIIGTHTVMANGGLRS 137 (165)
Q Consensus 110 sav~~~m~~v~~VllGAd~V~~nG~vvn 137 (165)
..+.|+.|.|||.|-++..++-
T Consensus 85 ------~~~iD~a~DGADeVd~~l~lIK 106 (239)
T 3uw1_A 85 ------IESLQVYVDGADEIDESGAMIK 106 (239)
T ss_dssp ------CSCEEEEEECCSEECTTCCEEC
T ss_pred ------ccccCEEEECCcccCcccCEec
Confidence 3689999999999999887765
No 20
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=96.80 E-value=0.00014 Score=58.45 Aligned_cols=43 Identities=5% Similarity=-0.048 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhccc------C---CCCEEEEecCC--------HHHHHHHHHHHh-CCce
Q psy2575 35 NPTSDTAPSQACEHI------H---SNEIILTLGYS--------KIVELFLKNAAQ-HRKF 77 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I------~---~~~~ILT~g~S--------~tV~~~L~~A~~-~~~f 77 (165)
...++.|+++++++| . ++++||||+++ .|++..+..|++ |+.|
T Consensus 148 ~~~n~~IG~~Ga~lI~~~~~~~~~~dg~~ILTHCNtG~LAT~g~GTALgvIr~a~~~Gk~~ 208 (211)
T 1w2w_A 148 LANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAK 208 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECSCCSGGGSSSSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCeEEeECCCchHhhcCcchHHHHHHHHHHcCCcc
Confidence 566889999999999 8 89999999999 799999999987 5443
No 21
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=96.27 E-value=0.042 Score=44.48 Aligned_cols=105 Identities=14% Similarity=0.144 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh---CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ---HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA 111 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~---~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa 111 (165)
+++++..+..|.+++++|.+ +-.|..||+..|+....+ ...+.+..+-+ +.+.+..+.+.||++.-+.+
T Consensus 5 d~~K~~aa~~A~~~V~~gmv-vGlGTGSTv~~~i~~L~~~~~~~~l~i~~V~t-----S~~t~~~a~~~Gi~l~~l~~-- 76 (228)
T 4gmk_A 5 DELKQLVGTKAVEWIKDGMI-VGLGTGSTVKYMVDALGKRVNEEGLDIVGVTT-----SIRTAEQAKSLGIVIKDIDE-- 76 (228)
T ss_dssp HHHHHHHHHHHGGGCCTTCE-EEECCSHHHHHHHHHHHHHHHHHCCCCEEEES-----SHHHHHHHHHTTCCBCCGGG--
T ss_pred HHHHHHHHHHHHHhCCCCCE-EEECchHHHHHHHHHHHHHHhhcCCcEEEEeC-----cHHHHHHHHHcCCceeChHH--
Confidence 35688899999999999975 456777799998887654 12234433322 23456677778998866554
Q ss_pred HHHhchhCCEEEEccceeecCCCeeehhcH-----HHHHHHHhhC
Q psy2575 112 MFGLISRVNKIIIGTHTVMANGGLRSVCGT-----HAVALAAQHY 151 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~nG~vvnk~GT-----~~lAl~Ak~~ 151 (165)
.++.|..|=|||-|-++..++--=|. -.+|.+|+++
T Consensus 77 ----~~~iD~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~~f 117 (228)
T 4gmk_A 77 ----VDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKN 117 (228)
T ss_dssp ----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEEE
T ss_pred ----CCccceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhhhe
Confidence 45899999999999998877655553 3456666653
No 22
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=93.71 E-value=0.21 Score=40.26 Aligned_cols=84 Identities=15% Similarity=0.230 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh---CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ---HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA 111 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~---~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa 111 (165)
++.++..+..|.+++++|.+| -.|..||+..|+....+ ....++..+.++ .+......+.||++..+.+
T Consensus 4 d~~K~~aa~~A~~~V~~gmvv-GlGTGSTv~~~I~~L~~~~~~~~l~i~~v~tS-----~~t~~~a~~~gi~l~~l~~-- 75 (226)
T 3ixq_A 4 EDLKLKVAKEAVKLVKDGMVI-GLGTGSTAALFIRELGNRIREEELTVFGIPTS-----FEAKMLAMQYEIPLVTLDE-- 75 (226)
T ss_dssp HHHHHHHHHHHGGGCCTTCEE-EECCSHHHHHHHHHHHHHHHHHTCCCEEEESS-----HHHHHHHHHTTCCBCCTTT--
T ss_pred HHHHHHHHHHHHHhCCCCCEE-EeCcHHHHHHHHHHHHHhhhhcCCeeEeeccc-----HHHHHHHHhcCCCcccccc--
Confidence 456888999999999999855 56777899999887654 123445544332 2345555668998765533
Q ss_pred HHHhchhCCEEEEccceeec
Q psy2575 112 MFGLISRVNKIIIGTHTVMA 131 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~ 131 (165)
. +.|..|=|||-|-.
T Consensus 76 ----~-~iDl~iDGADEvd~ 90 (226)
T 3ixq_A 76 ----Y-DVDIAFDGADEVEE 90 (226)
T ss_dssp ----C-CCSEEEECCSEEET
T ss_pred ----c-cccEEEeCcchhcc
Confidence 1 38999999999974
No 23
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=92.55 E-value=3.4 Score=33.18 Aligned_cols=118 Identities=9% Similarity=0.087 Sum_probs=70.5
Q ss_pred ChHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...++. ....+++|-|.+..+...+.... ++.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 69 ~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~ 143 (391)
T 4dq6_A 69 PDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT-KANDKIMIQE--PVYSPFNS--VVKNNNRELIISPL 143 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEEEECS--SCCTHHHH--HHHHTTCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcC--CCCHHHHH--HHHHcCCeEEeeee
Confidence 4566777877776654 34567777776656555555443 3334666653 66666433 34457877776653
Q ss_pred c------------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 S------------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 s------------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. .+...+.+ .++++=...-.+.|.++...--..++-+|+++++++++
T Consensus 144 ~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 144 QKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp EECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEe
Confidence 3 23334444 44443333334456666555566788889999998886
No 24
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.89 E-value=1.5 Score=35.41 Aligned_cols=102 Identities=12% Similarity=0.038 Sum_probs=63.6
Q ss_pred CCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEcc---chHHHhchhCCEEEEc
Q psy2575 52 NEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIPD---SAMFGLISRVNKIIIG 125 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~d---sav~~~m~~v~~VllG 125 (165)
..+|++.|.+..+=. ++....+ ...+|+++...+.. +-......|...|+.+..... .++..++++. |
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----~ 83 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLD-AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----E 83 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHH-TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----T
T ss_pred CCeEEEECCCcHHHHHHHHHHHH-CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----C
Confidence 357888887655533 3333333 33677777554422 233445667777877655433 3445556622 5
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCC-CcEEEEe
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYS-IPYPCTF 159 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~~ 159 (165)
+|.|+...+..|-.|+..+.-+|+..+ ++.++.+
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 555555566678999999999999998 9988863
No 25
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.98 E-value=0.89 Score=39.97 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=49.6
Q ss_pred HhcccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchH-----------
Q psy2575 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAM----------- 112 (165)
Q Consensus 45 a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav----------- 112 (165)
.-..++.||+++..|....+.++...... .+.-+++|+-. +.-|..+|+.|.+.|+++.+|....-
T Consensus 316 ~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~g 393 (565)
T 4gx0_A 316 RETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGH--GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYG 393 (565)
T ss_dssp -------------------------------CCCCEEEECC--SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEES
T ss_pred CCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCCCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEe
Confidence 34466788999999888777665543322 12256777743 45689999999999999999873321
Q ss_pred ---------HHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 113 ---------FGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 113 ---------~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
..-+.++|.+++..+. ..=+..+++.||+.+.+..+++
T Consensus 394 D~t~~~~L~~agi~~ad~vi~~~~~---------d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 394 DATVGQTLRQAGIDRASGIIVTTND---------DSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp CSSSSTHHHHHTTTSCSEEEECCSC---------HHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCCCHHHHHhcCccccCEEEEECCC---------chHHHHHHHHHHHHCCCCEEEE
Confidence 1123456666655432 3456788899999988755554
No 26
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.70 E-value=2.6 Score=29.51 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=53.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHh-----chhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGL-----ISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~-----m~~v~~VllGA 126 (165)
+..|++.|++..=..+.....+ ..++|++.|..|. -++.+.+.|+++... |..-... +.++|.|++..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~~-----~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSKE-----KIELLEDEGFDAVIA-DPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHH-----HHHHHHHTTCEEEEC-CTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHH-----HHHHHHHCCCcEEEC-CCCCHHHHHhCCcccCCEEEEec
Confidence 4578888998644444444433 4568888887653 456666778766543 3222222 34577777654
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. +......++..|++.+.+.++
T Consensus 79 ~---------~~~~n~~~~~~a~~~~~~~ii 100 (141)
T 3llv_A 79 S---------DDEFNLKILKALRSVSDVYAI 100 (141)
T ss_dssp S---------CHHHHHHHHHHHHHHCCCCEE
T ss_pred C---------CHHHHHHHHHHHHHhCCceEE
Confidence 3 334456778888887654443
No 27
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=89.68 E-value=0.76 Score=32.61 Aligned_cols=77 Identities=12% Similarity=0.202 Sum_probs=49.8
Q ss_pred CceEEEEecCCCCChHHHHHHHH----hhcCCceEE--EccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHH
Q psy2575 75 RKFQCIVMENSPENKGHELAVSL----AKSKIQTVL--IPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAA 148 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L----~~~GI~v~~--I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A 148 (165)
++.+++++-+.=...+. |++++ .+.|+++.. .+.+.....++++|.+++|...-+.- -.+--.|
T Consensus 5 ~~mkIlL~C~aGmSTsl-lv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~---------~~ik~~~ 74 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQ-LANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYY---------REMKVDA 74 (108)
T ss_dssp CCEEEEEEESSSSHHHH-HHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGH---------HHHHHHH
T ss_pred cCceEEEECCCCCCHHH-HHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHH---------HHHHHHh
Confidence 45566655444333333 44443 357898888 44666777788999999999875432 1255566
Q ss_pred hhCCCcEEEEeec
Q psy2575 149 QHYSIPYPCTFLL 161 (165)
Q Consensus 149 k~~~vPv~V~~~~ 161 (165)
..+++||.++-+.
T Consensus 75 ~~~~ipV~vI~~~ 87 (108)
T 3nbm_A 75 ERLGIQIVATRGM 87 (108)
T ss_dssp TTTTCEEEECCHH
T ss_pred hhcCCcEEEeCHH
Confidence 7889999987543
No 28
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.62 E-value=1.9 Score=32.32 Aligned_cols=101 Identities=13% Similarity=0.027 Sum_probs=58.4
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--c--chHHHhchhCCEEEEcccee
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--D--SAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--d--sav~~~m~~v~~VllGAd~V 129 (165)
+|++.|-+.-+=..+......+..+|+++.-+|...- .+ .++.+.... | ..+...+.++|.|+--|-..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP-----QY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC-----CC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh-----hc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 5777777666644443333334577777754443110 00 233332221 2 34555677777777665443
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
..+---+|..|+..+.-+|++.+++-+|...+
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 33333468899999999999999876665443
No 29
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=89.29 E-value=0.71 Score=36.56 Aligned_cols=85 Identities=4% Similarity=-0.057 Sum_probs=52.9
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch---HHHhchhCCEEEEccceeecCCCe-eeh-hcHHHHHHHHh
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA---MFGLISRVNKIIIGTHTVMANGGL-RSV-CGTHAVALAAQ 149 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa---v~~~m~~v~~VllGAd~V~~nG~v-vnk-~GT~~lAl~Ak 149 (165)
...+|.|++..|...-..+.+.|++.|+++.+++-.. +...+.++|.+++.--.....+.. ... .+...+..-|.
T Consensus 11 ~~~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~ 90 (239)
T 1o1y_A 11 HHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEIL 90 (239)
T ss_dssp CCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHH
T ss_pred ceeEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHHH
Confidence 5678999998888666678999999999999776432 233456788777764221111110 111 12333333444
Q ss_pred hCCCcEEEEe
Q psy2575 150 HYSIPYPCTF 159 (165)
Q Consensus 150 ~~~vPv~V~~ 159 (165)
..++|++-+|
T Consensus 91 ~~~~PiLGIC 100 (239)
T 1o1y_A 91 KKEIPFLGIC 100 (239)
T ss_dssp HHTCCEEEET
T ss_pred HCCCCEEEEc
Confidence 5689999877
No 30
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.27 E-value=1.2 Score=33.94 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=56.2
Q ss_pred CCCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCC-ceEEEcc-chHHHhchhCCEEEEccc
Q psy2575 51 SNEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKI-QTVLIPD-SAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI-~v~~I~d-sav~~~m~~v~~VllGAd 127 (165)
.|.+|++.|.|.-+=. +.....+ +..+|+++.-+|.. ...+.+.++ .+..... ..+...+.++|.|+--|-
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKN-KGHEPVAMVRNEEQ-----GPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSGGG-----HHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHh-CCCeEEEEECChHH-----HHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 3678999988766633 3333333 45688877655432 234455566 4332222 233444455555554432
Q ss_pred eeecCC----CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 128 TVMANG----GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 128 ~V~~nG----~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
....+. --+|-.|+..+.-+|+..+++-+|..
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 129 (236)
T 3e8x_A 94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMV 129 (236)
T ss_dssp CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 110000 01267889999999999888766654
No 31
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.22 E-value=1.6 Score=37.48 Aligned_cols=91 Identities=8% Similarity=0.099 Sum_probs=59.9
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHh-----chhCCEEEEc
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGL-----ISRVNKIIIG 125 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~-----m~~v~~VllG 125 (165)
.++.|++.|+++.=..+.....+ ....|+++|..|. .++.+++.|+++.+.. ..-..+ +.+++.|++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~-----~v~~~~~~g~~vi~GD-at~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPD-----HIETLRKFGMKVFYGD-ATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHH-----HHHHHHHTTCCCEESC-TTCHHHHHHTTTTTCSEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHH-----HHHHHHhCCCeEEEcC-CCCHHHHHhcCCCccCEEEEC
Confidence 34568889998765555554443 4577888888765 5677788899876554 333322 4567888776
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+ +..-+..++..||+++..+.+
T Consensus 76 ~~---------~~~~n~~i~~~ar~~~p~~~I 98 (413)
T 3l9w_A 76 ID---------DPQTNLQLTEMVKEHFPHLQI 98 (413)
T ss_dssp CS---------SHHHHHHHHHHHHHHCTTCEE
T ss_pred CC---------ChHHHHHHHHHHHHhCCCCeE
Confidence 54 245677888999987754333
No 32
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=88.37 E-value=5.3 Score=31.94 Aligned_cols=109 Identities=10% Similarity=-0.001 Sum_probs=61.1
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhh-------cCCceEEEc---cchHHHhchhCC
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAK-------SKIQTVLIP---DSAMFGLISRVN 120 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~-------~GI~v~~I~---dsav~~~m~~v~ 120 (165)
.+.+||+.|.+.-+=..|......+..+|+++..++...-.. ...+.+ .++.+.... ...+..++.++|
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYN-LDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH-HHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 467899998776664433333222457888887655433222 233333 344443322 223455666666
Q ss_pred EEEEccceeecCC--------CeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 121 KIIIGTHTVMANG--------GLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 121 ~VllGAd~V~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.|+--|-....+. --+|-.||..+.-+|+..+++-+|...
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~S 150 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAA 150 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 6665442211000 134678899999999999986555543
No 33
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=88.00 E-value=5 Score=27.68 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=35.1
Q ss_pred HHHHhhcCCce---EE--EccchHHH---hch--hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEE
Q psy2575 94 AVSLAKSKIQT---VL--IPDSAMFG---LIS--RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 94 a~~L~~~GI~v---~~--I~dsav~~---~m~--~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+.+.+.|+++ +. ........ +.+ ++|.+++|+.. .+++-. -.|+.. --+.++.++||+++
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~---~~~~~~~~~Gs~~-~~vl~~~~~pVlvV 147 (147)
T 3hgm_A 76 KTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG---TNGDKSLLLGSVA-QRVAGSAHCPVLVV 147 (147)
T ss_dssp HHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC---TTCCSCCCCCHHH-HHHHHHCSSCEEEC
T ss_pred HHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC---CccccceeeccHH-HHHHhhCCCCEEEC
Confidence 44556678776 32 22222222 233 69999999875 223322 246544 34556778999974
No 34
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=87.99 E-value=1 Score=36.87 Aligned_cols=91 Identities=14% Similarity=0.280 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhC---CceEEEEecC------CCCChHHHHHHHHhhc-CC
Q psy2575 37 TSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQH---RKFQCIVMEN------SPENKGHELAVSLAKS-KI 102 (165)
Q Consensus 37 ~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~---~~f~ViV~Es------~P~~eG~~la~~L~~~-GI 102 (165)
.++.|++.|+++ |+++++|. +++++|+..+.....+. ++.+|+-+.. .|......+++.|.+. |+
T Consensus 91 ~k~~ia~~AA~~l~~~i~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~~~~ 169 (315)
T 2w48_A 91 QLSAMGQHGALLVDRLLEPGDIIG-FSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKA 169 (315)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEE-ECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEE-ECChHHHHHHHHhhccccCCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHHHCC
Confidence 577899888886 89988755 58888988877655432 4577776532 3344455678888764 77
Q ss_pred ceEEE--ccc----hHHH-hc------------hhCCEEEEccce
Q psy2575 103 QTVLI--PDS----AMFG-LI------------SRVNKIIIGTHT 128 (165)
Q Consensus 103 ~v~~I--~ds----av~~-~m------------~~v~~VllGAd~ 128 (165)
+...+ |+. .... ++ .++|+.|+|.-.
T Consensus 170 ~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIGg 214 (315)
T 2w48_A 170 ESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGS 214 (315)
T ss_dssp EECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCBC
T ss_pred ceeEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccCc
Confidence 66544 221 1111 11 369999999974
No 35
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=87.98 E-value=5 Score=27.70 Aligned_cols=61 Identities=8% Similarity=0.070 Sum_probs=34.7
Q ss_pred HHHHhhcCC-ceEEE--ccchHHHhc------hhCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEE
Q psy2575 94 AVSLAKSKI-QTVLI--PDSAMFGLI------SRVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 94 a~~L~~~GI-~v~~I--~dsav~~~m------~~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+.+.+.|+ +++.. .......++ .++|.+++|+..- |++-. -.|+..- -+.++.++||+++
T Consensus 75 ~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~-~vl~~~~~pVlvV 145 (146)
T 3s3t_A 75 QQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGT---NSPHRVAVGSTTS-YVVDHAPCNVIVI 145 (146)
T ss_dssp HHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCCS---SCTTTCSSCHHHH-HHHHHCSSEEEEE
T ss_pred HHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCCC---CCcceEEEcchHH-HHhccCCCCEEEe
Confidence 444556788 65533 222222233 3599999998752 22222 2455443 4456778999986
No 36
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=87.83 E-value=3.4 Score=33.96 Aligned_cols=118 Identities=10% Similarity=-0.024 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHH--h-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 35 NPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAA--Q-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~--~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
...++.+++..... +...++++|-|.+..+..++.... + +...+|++. .|.+.+... .+...|.++..+
T Consensus 85 ~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~--~p~~~~~~~--~~~~~g~~~~~v 160 (437)
T 3g0t_A 85 PELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFI--DPGFNLNKL--QCRILGQKFESF 160 (437)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEE--ESCCHHHHH--HHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEe--CCCcHhHHH--HHHHcCCEEEEE
Confidence 56788888766543 445678888777766666666553 3 322267766 466665433 344568887777
Q ss_pred ccc---------hHHHhc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 108 PDS---------AMFGLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 108 ~ds---------av~~~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+.. .+...+ ++...|++ +..-.+.|.+...---..++-+|+++++++++
T Consensus 161 ~~~~~~~~~d~~~l~~~l~~~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 161 DLFEYRGEKLREKLESYLQTGQFCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp EGGGGCTTHHHHHHHHHHTTTCCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eecCCCCccCHHHHHHHHhcCCceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 632 222333 23555555 22234455555444455678889999998886
No 37
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=87.82 E-value=9.2 Score=30.57 Aligned_cols=118 Identities=7% Similarity=-0.025 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...++. ....+++|-|.+..+...+.... ++.-+|++. .|.+.+. ...+...|.++..++.
T Consensus 64 ~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~--~~~~~~~--~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 64 PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT-SPGDQILVQ--EPVYNMF--YSVIEGNGRRVISSDL 138 (391)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEEEEC--SSCCHHH--HHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC-CCCCeEEEC--CCCcHHH--HHHHHHcCCEEEEeee
Confidence 4566777877766553 34567777666666555555543 333456654 4666553 3344557777766553
Q ss_pred -----------chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----------SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----------sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+. +...|++ ...-.+.|.++...--..++-+|+++++++++
T Consensus 139 ~~~~~~~~~d~~~l~~~l~~~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 139 IYENSKYSVNWADLEEKLATPSVRMMVF-CNPHNPIGYAWSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp EEETTEEECCHHHHHHHHTSTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eecCCceeecHHHHHHHHhccCceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 23333443 3444444 33344566666656666788889999998886
No 38
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=87.76 E-value=1.9 Score=35.36 Aligned_cols=84 Identities=13% Similarity=0.033 Sum_probs=58.5
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
..|+.|..+||-+.+.+.+. +.++|+|+|-.|. + |. .++.+..+++++||.|++-..++
T Consensus 139 ~~g~kV~vIG~~P~i~~~l~-----~~~~v~V~d~~p~-~-----------g~----~p~~~~e~ll~~aD~viiTGsTl 197 (270)
T 2h1q_A 139 VKGKKVGVVGHFPHLESLLE-----PICDLSILEWSPE-E-----------GD----YPLPASEFILPECDYVYITCASV 197 (270)
T ss_dssp TTTSEEEEESCCTTHHHHHT-----TTSEEEEEESSCC-T-----------TC----EEGGGHHHHGGGCSEEEEETHHH
T ss_pred cCCCEEEEECCCHHHHHHHh-----CCCCEEEEECCCC-C-----------CC----CChHHHHHHhhcCCEEEEEeeee
Confidence 35799999999887776554 4579999999987 2 21 37888888999999999987664
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
.. +.=-..+. .|+ ...+++++.|+.
T Consensus 198 vN------~Ti~~lL~-~~~-~a~~vvl~GPS~ 222 (270)
T 2h1q_A 198 VD------KTLPRLLE-LSR-NARRITLVGPGT 222 (270)
T ss_dssp HH------TCHHHHHH-HTT-TSSEEEEESTTC
T ss_pred ec------CCHHHHHH-hCc-cCCeEEEEecCh
Confidence 32 22222222 233 456888887764
No 39
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.37 E-value=6.5 Score=32.12 Aligned_cols=89 Identities=17% Similarity=0.110 Sum_probs=53.9
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhc-hhCCEEEEccceeec
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLI-SRVNKIIIGTHTVMA 131 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m-~~v~~VllGAd~V~~ 131 (165)
..|..+|-..+=...+......+.++|.+.|.++..+ +.+.|.+.|+++.+-.+. ..+. .++|.|++++ +|-+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~--~~l~~~~~d~vV~Sp-gi~~ 78 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP---MSTQLEALGIDVYEGFDA--AQLDEFKADVYVIGN-VAKR 78 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTT---HHHHHHHTTCEEEESCCG--GGGGSCCCSEEEECT-TCCT
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcH---HHHHHHhCCCEEECCCCH--HHcCCCCCCEEEECC-CcCC
Confidence 4677776544333222222223678999999887643 456788899988754432 2233 4688888876 2222
Q ss_pred CCCeeehhcHHHHHHHHhhCCCcEE
Q psy2575 132 NGGLRSVCGTHAVALAAQHYSIPYP 156 (165)
Q Consensus 132 nG~vvnk~GT~~lAl~Ak~~~vPv~ 156 (165)
+ .+....|++.++|++
T Consensus 79 ~---------~p~~~~a~~~gi~v~ 94 (326)
T 3eag_A 79 G---------MDVVEAILNLGLPYI 94 (326)
T ss_dssp T---------CHHHHHHHHTTCCEE
T ss_pred C---------CHHHHHHHHcCCcEE
Confidence 2 345566777777776
No 40
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=86.21 E-value=7.6 Score=31.36 Aligned_cols=118 Identities=12% Similarity=0.076 Sum_probs=68.8
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...+. +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~ 144 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALF-DSGDRVGIGA--PGYPSYR--QILRALGLVPVDLPT 144 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEE--SCCHHHH--HHHHHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhc-CCCCEEEEcC--CCCccHH--HHHHHcCCEEEEeec
Confidence 356788888776543 445677777776666555555443 3334666653 5565543 445567888887764
Q ss_pred ch-------HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA-------MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa-------v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +..+-+ +...|++. ..-.+.|.+...---..++-+|+++++++++
T Consensus 145 ~~~~~~~~d~~~l~~~~~~~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 145 APENRLQPVPADFAGLDLAGLMVA-SPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp CGGGTTSCCHHHHTTSCCSEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcccCCCCCHHHHHhcCCeEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 31 111211 34444443 2223445555544456788889999998876
No 41
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=86.19 E-value=2.7 Score=35.12 Aligned_cols=70 Identities=13% Similarity=0.054 Sum_probs=45.8
Q ss_pred ecCCHHHHHHHHHHHh--CCce--EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCC
Q psy2575 58 LGYSKIVELFLKNAAQ--HRKF--QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANG 133 (165)
Q Consensus 58 ~g~S~tV~~~L~~A~~--~~~f--~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG 133 (165)
.-|+..+.+.+..+++ +.++ =||++-+-|.++...=.+.++.. |+|+|--.
T Consensus 190 ~~yd~~Lr~~a~~aA~~~gi~~~~Gvy~~~~GP~FeT~AE~r~~r~~------------------------GadaVgMs- 244 (303)
T 3la8_A 190 NAYTADYREVAHQVADKIGIKLDEGVYIGVSGPSYETPAEIRAFKTL------------------------GADAVGMS- 244 (303)
T ss_dssp TSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEESS-
T ss_pred cccCHHHHHHHHHHHHHcCCceEEEEEEEeeCCccCCHHHHHHHHHc------------------------CCCEEecc-
Confidence 3567777776666655 4333 37777788887755433444333 66666554
Q ss_pred CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 134 GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 134 ~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.|.+|+++++||.+++
T Consensus 245 -------t~pEa~vAre~gi~~~~Is 263 (303)
T 3la8_A 245 -------TVPEVIVAVHSGLKVLGIS 263 (303)
T ss_dssp -------SHHHHHHHHHTTCEEEEEE
T ss_pred -------HHHHHHHHHHcCCCEEEEE
Confidence 4788888999999988765
No 42
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=86.06 E-value=4.3 Score=32.48 Aligned_cols=117 Identities=9% Similarity=0.013 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc-
Q psy2575 35 NPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD- 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d- 109 (165)
...++.+++...+. +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~-~~gd~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~ 135 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT-PAQSKVIVPT--PAYPPFF--HLLSATQREGIFIDAT 135 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCCEEEEE--SCCTHHH--HHHHHHTCCEEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc-CCCCEEEEcC--CCcHhHH--HHHHHcCCEEEEccCC
Confidence 56677887766543 445677777776666555555443 3334566654 5555543 334556888887763
Q ss_pred -----chHHHhchh-CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----SAMFGLISR-VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----sav~~~m~~-v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+.+ ...+++. ..-.+.|.+...---..++-+|+++++++++
T Consensus 136 ~~~d~~~l~~~l~~~~~~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 136 GGINLHDVEKGFQAGARSILLC-NPYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp TSCCHHHHHHHHHTTCCEEEEE-SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHhccCCCEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 233334433 3334333 2233445555544555677789999998886
No 43
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=85.91 E-value=4.2 Score=31.94 Aligned_cols=103 Identities=7% Similarity=0.044 Sum_probs=57.3
Q ss_pred CCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCC---hHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEE
Q psy2575 52 NEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPEN---KGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIII 124 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~---eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~Vll 124 (165)
..+|++.|-+..+=. +.....+ +.++|+++.-.+.. +.......|...|+.+.... ..++..+++.+|.|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASIS-LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH-TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh-CCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 346788876544422 3332222 34677776544432 12222344556676544322 2345666777777665
Q ss_pred ccceeecCCCeeehhcHHHHHHHHhhCC-CcEEEE
Q psy2575 125 GTHTVMANGGLRSVCGTHAVALAAQHYS-IPYPCT 158 (165)
Q Consensus 125 GAd~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 158 (165)
-+-.... + .+-.++..++-+|++.+ ++-+|.
T Consensus 83 ~a~~~~~-~--~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 83 ALAGGVL-S--HHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp CCCCSSS-S--TTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred CCccccc-h--hhHHHHHHHHHHHHhcCCCceEEe
Confidence 4432111 1 26678999999999998 887774
No 44
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=85.87 E-value=3.4 Score=32.38 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=53.7
Q ss_pred CEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCC-CC----hHHHHHHHHhhcCCceEEEcc---chHHHhchhCCEEE
Q psy2575 53 EIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSP-EN----KGHELAVSLAKSKIQTVLIPD---SAMFGLISRVNKII 123 (165)
Q Consensus 53 ~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P-~~----eG~~la~~L~~~GI~v~~I~d---sav~~~m~~v~~Vl 123 (165)
.+|++.|.+..+=. +.....+ +.++|+++.-+| .. +-.+..+.|...|+.+..... .++..+++.+|.|+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIK-AGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHH-HTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cEEEEECCCchHHHHHHHHHHh-CCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 46778776544422 2222222 225666654433 11 222233456667776544332 24555666565555
Q ss_pred EccceeecCCCeeehhcHHHHHHHHhhCC-CcEEEE
Q psy2575 124 IGTHTVMANGGLRSVCGTHAVALAAQHYS-IPYPCT 158 (165)
Q Consensus 124 lGAd~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 158 (165)
-- -+...-.++..++-+|+..+ ++-+|.
T Consensus 82 ~~-------a~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 82 CA-------AGRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EC-------SSSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EC-------CcccccccHHHHHHHHHhcCCceEEee
Confidence 43 33334678888998999887 887773
No 45
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=85.75 E-value=9 Score=31.22 Aligned_cols=119 Identities=8% Similarity=0.015 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEE--EecCCHHHHHHH--HHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceE
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIIL--TLGYSKIVELFL--KNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTV 105 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~IL--T~g~S~tV~~~L--~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~ 105 (165)
....++.|++..... +...++++ |.|.+..+...+ ....+ +.-+|++.+ |.+.+.. ..+...|.++.
T Consensus 75 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~-~gd~Vl~~~--p~~~~~~--~~~~~~g~~~~ 149 (412)
T 1yaa_A 75 LPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFF-PDKLVYLSK--PTWANHM--AIFENQGLKTA 149 (412)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHC-TTCCEEEEE--SCCTTHH--HHHHTTTCCEE
T ss_pred cHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhC-CCCEEEEeC--CCCccHH--HHHHHcCceEE
Confidence 466788888766432 34567887 877776665542 22222 334566664 5555533 34455788877
Q ss_pred EEcc-c---------hHHHhchh---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 106 LIPD-S---------AMFGLISR---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 106 ~I~d-s---------av~~~m~~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.++. . .+...+.+ .+++++=+..-.+.|.+....=-..++-+|+++++++++
T Consensus 150 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 150 TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp EEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 7653 1 23333333 245555344445556655544445678889999988775
No 46
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=85.66 E-value=8.3 Score=31.28 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=57.8
Q ss_pred HHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHH------hCCceEEEEecCCCCChHHH-HHHHHhhc---CCceEE
Q psy2575 39 DTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAA------QHRKFQCIVMENSPENKGHE-LAVSLAKS---KIQTVL 106 (165)
Q Consensus 39 ~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~------~~~~f~ViV~Es~P~~eG~~-la~~L~~~---GI~v~~ 106 (165)
+.+.+..++++. ...+++|-|.+..+...+..+. + +.-+|++++ .+.+.+.. ....+.+. |.++..
T Consensus 74 ~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~-~gd~vii~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 151 (416)
T 1qz9_A 74 ERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRS-PERRVIVTE-TSNFPTDLYIAEGLADMLQQGYTLRL 151 (416)
T ss_dssp HHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHS-TTCCEEEEE-TTSCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccC-CCCcEEEEc-CCCCCchHHHHHHHHHHhcCCceEEE
Confidence 344444455554 2467777555544444444432 3 222455543 23333221 22233332 888888
Q ss_pred Ec-cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 107 IP-DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 107 I~-dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++ ...+-..+.+-.++++-...-.+.|.+.. -..++-+|+++++++++
T Consensus 152 v~~~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 152 VDSPEELPQAIDQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIW 200 (416)
T ss_dssp ESSGGGHHHHCSTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred eCcHHHHHHHhCCCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEE
Confidence 87 34444444432233333333233454443 36788889999998876
No 47
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=85.50 E-value=1.9 Score=34.86 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=56.1
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
..++.|..+||-.-+.+.|. ++ ++++|+|-.|..-|. + ..+|+.-+.++++||.|++-..++
T Consensus 114 ~~~~kV~vIG~~p~l~~~l~----~~-~~v~V~d~~p~~~~~---------~----~~~~~~e~~~l~~~D~v~iTGsTl 175 (249)
T 3npg_A 114 DEIKRIAIIGNMPPVVRTLK----EK-YEVYVFERNMKLWDR---------D----TYSDTLEYHILPEVDGIIASASCI 175 (249)
T ss_dssp SCCSEEEEESCCHHHHHHHT----TT-SEEEEECCSGGGCCS---------S----EECGGGHHHHGGGCSEEEEETTHH
T ss_pred cCCCEEEEECCCHHHHHHHh----cc-CCEEEEECCCcccCC---------C----CCChhHHHhhhccCCEEEEEeeee
Confidence 45689999999987665554 24 899999999975332 1 136766667999999999987664
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
.. + |..--+...+...+++++.|+.
T Consensus 176 vN------~--Ti~~lL~~~~~~~~vvl~GPS~ 200 (249)
T 3npg_A 176 VN------G--TLDMILDRAKKAKLIVITGPTG 200 (249)
T ss_dssp HH------T--CHHHHHHHCSSCSEEEEESGGG
T ss_pred cc------C--CHHHHHHhCcccCeEEEEecCc
Confidence 32 2 3322221123344677777653
No 48
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=85.42 E-value=4.3 Score=32.48 Aligned_cols=32 Identities=19% Similarity=0.002 Sum_probs=23.4
Q ss_pred hCCEEEEccceeecCCCeeehhc----HHHHHHHHh
Q psy2575 118 RVNKIIIGTHTVMANGGLRSVCG----THAVALAAQ 149 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvnk~G----T~~lAl~Ak 149 (165)
++|..|+.+...-.+|.+.-... ...+|.+|+
T Consensus 151 ~~DvAli~a~~aD~~GN~~~~~~~~~~~~~~a~aA~ 186 (235)
T 3rrl_A 151 TGDYGLIKAYKSDTLGNLVFRKTARNFNPLCAMAAK 186 (235)
T ss_dssp CEEEEEEECSEEETTCCEECCGGGCTTHHHHHHTEE
T ss_pred CCeEEEEEeeecCCCceEEEecCcccccHHHHHhcC
Confidence 58999999999999999886543 233455544
No 49
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=85.18 E-value=7.9 Score=27.26 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=54.2
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHh-----chhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGL-----ISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~-----m~~v~~VllGA 126 (165)
.+.|+.+|+++.=..+.....+ ..++|++.|..|. .++.+++.|+++.+ .|..-... +.++|.|++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~-----~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRT-----RVDELRERGVRAVL-GNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHH-----HHHHHHHTTCEEEE-SCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHH-----HHHHHHHcCCCEEE-CCCCCHHHHHhcCcccCCEEEEEC
Confidence 3578888998765655555544 4567888887764 45667778988744 34332222 35677777654
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhC--CCcEEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHY--SIPYPCT 158 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V~ 158 (165)
.. ..-+..++..|+.. ++++++-
T Consensus 80 ~~---------~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 80 PN---------GYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp SC---------HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CC---------hHHHHHHHHHHHHHCCCCeEEEE
Confidence 32 22334466667764 3454443
No 50
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=84.81 E-value=14 Score=29.76 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=62.7
Q ss_pred HHHHHHHHhcccCC-CC-EEEEecCC-HHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc----
Q psy2575 38 SDTAPSQACEHIHS-NE-IILTLGYS-KIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS---- 110 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~-~~-~ILT~g~S-~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds---- 110 (165)
.+.+.+..++++.. .+ .+++.+.+ ..+...+.... ++.-+|++.+ |.+.|..+...+...|.++..++..
T Consensus 46 ~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~-~~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 122 (416)
T 3isl_A 46 MNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVI-EPEDDVLIPI--YGRFGYLLTEIAERYGANVHMLECEWGTV 122 (416)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhc-CCCCEEEEec--CCcccHHHHHHHHhcCCeeEEEecCCCCC
Confidence 44444444555542 33 33244433 33444444332 3445777765 5555645666777789888887632
Q ss_pred ----hHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 111 ----AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 111 ----av~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+...+. +...|++ ...-.+.|.+.. --.++-+|+++++++++=
T Consensus 123 ~d~~~l~~~i~~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~D 172 (416)
T 3isl_A 123 FDPEDIIREIKKVKPKIVAM-VHGETSTGRIHP---LKAIGEACRTEDALFIVD 172 (416)
T ss_dssp CCHHHHHHHHHHHCCSEEEE-ESEETTTTEECC---CHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHhhCCCcEEEE-EccCCCCceecC---HHHHHHHHHHcCCEEEEE
Confidence 2333443 3434433 333344554443 456888999999988873
No 51
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=84.71 E-value=12 Score=29.90 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=60.7
Q ss_pred HHHHHHhcccCC---CCEEEEecCCHHHHHHHHHHH---hCCceEEEEecCCCCChHHH--HHHHHhhcCCceEEEccc-
Q psy2575 40 TAPSQACEHIHS---NEIILTLGYSKIVELFLKNAA---QHRKFQCIVMENSPENKGHE--LAVSLAKSKIQTVLIPDS- 110 (165)
Q Consensus 40 ~Ia~~a~~~I~~---~~~ILT~g~S~tV~~~L~~A~---~~~~f~ViV~Es~P~~eG~~--la~~L~~~GI~v~~I~ds- 110 (165)
...+..++++.. ..+++|-|.+..+...+..+. -++.-+|++.+ |.+.|.. +.......|.++..++..
T Consensus 71 ~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (406)
T 1kmj_A 71 NVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ--MEHHANIVPWQMLCARVGAELRVIPLNP 148 (406)
T ss_dssp HHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEET--TCCGGGTHHHHHHHHHHTCEEEEECBCT
T ss_pred HHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEec--ccchHHHHHHHHHHHhCCCEEEEEecCC
Confidence 333444445543 567777776666666666552 23445677764 4444432 222234468888777632
Q ss_pred -------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-..+.+-.++++-...-.+.|.+.. -..++-+|+++++++++
T Consensus 149 ~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 149 DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp TSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 233333322233332222233455544 45688889999998876
No 52
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=84.65 E-value=8.1 Score=31.22 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=66.8
Q ss_pred CChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-------CCceEEEEecCCCCChHHH-HHHHHhh-----
Q psy2575 33 FANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-------HRKFQCIVMENSPENKGHE-LAVSLAK----- 99 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-------~~~f~ViV~Es~P~~eG~~-la~~L~~----- 99 (165)
+.....+.+.+..+++.....+++|-|.+..+...+..+.+ ..+-+|++.+ |.+.|.. .+..+..
T Consensus 78 ~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~--~~y~~~~~~~~~~~~~~~~~ 155 (406)
T 4adb_A 78 YTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFK--NAFHGRTLFTVSAGGQPAYS 155 (406)
T ss_dssp SCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEET--TCCCCSSHHHHHHSSCGGGT
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEC--CCcCCCcHHHhhccCCcccc
Confidence 33444566666666677655777777777666666654432 1224666654 3333321 2222221
Q ss_pred -----cCCceEEEccc---hHHHhch-hCCEEEEccceeecCCCee--ehhcHHHHHHHHhhCCCcEEE
Q psy2575 100 -----SKIQTVLIPDS---AMFGLIS-RVNKIIIGTHTVMANGGLR--SVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 100 -----~GI~v~~I~ds---av~~~m~-~v~~VllGAd~V~~nG~vv--nk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+.++..++-. .+...+. +...|++- -+.+.|+++ ...=-..++-+|++|++++++
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~--p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~ 222 (406)
T 4adb_A 156 QDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE--PIQGEGGVVPASNAFLQGLRELCNRHNALLIF 222 (406)
T ss_dssp GGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC--SEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe--CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 12344444322 2333333 33344444 467788777 555566788899999998886
No 53
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=84.44 E-value=7.4 Score=31.18 Aligned_cols=114 Identities=13% Similarity=0.012 Sum_probs=67.0
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP- 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~- 108 (165)
....++.+++..... +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+... .+...|.++..++
T Consensus 68 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~--p~~~~~~~--~~~~~g~~~~~v~~ 142 (370)
T 2z61_A 68 ILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSII-DDGDEVLIQN--PCYPCYKN--FIRFLGAKPVFCDF 142 (370)
T ss_dssp CHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEES--SCCTHHHH--HHHHTTCEEEEECS
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhc-CCCCEEEEeC--CCchhHHH--HHHHcCCEEEEeCC
Confidence 456788888776542 344567777776666665555443 3334666664 55555433 3455788888775
Q ss_pred c-chHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 D-SAMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 d-sav~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
| ..+...+. +...|++ ...-.+.|.+...- ++-+|+++++++++
T Consensus 143 d~~~l~~~l~~~~~~v~~-~~p~nptG~~~~~~----l~~~~~~~~~~li~ 188 (370)
T 2z61_A 143 TVESLEEALSDKTKAIII-NSPSNPLGEVIDRE----IYEFAYENIPYIIS 188 (370)
T ss_dssp SHHHHHHHCCSSEEEEEE-ESSCTTTCCCCCHH----HHHHHHHHCSEEEE
T ss_pred CHHHHHHhcccCceEEEE-cCCCCCcCcccCHH----HHHHHHHcCCEEEE
Confidence 2 22333333 2334444 22223456666555 88889999988776
No 54
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=83.88 E-value=3.8 Score=32.07 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=55.7
Q ss_pred CCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCC----hHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEE
Q psy2575 52 NEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPEN----KGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKII 123 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~----eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~Vl 123 (165)
..+|++.|.+..+=. +.....+ +.++|+++.-++.. +-....+.|...|+.+.... ..++..+++.+|.|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLD-LGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH-TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh-CCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence 356888876544422 3332222 33677776544321 12223455666776654332 134555666666555
Q ss_pred EccceeecCCCeeehhcHHHHHHHHhhCC-CcEEEE
Q psy2575 124 IGTHTVMANGGLRSVCGTHAVALAAQHYS-IPYPCT 158 (165)
Q Consensus 124 lGAd~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 158 (165)
.-+ +..+-.++..++-+|+..+ ++-+|.
T Consensus 83 ~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 83 STV-------GSLQIESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp ECC-------CGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred ECC-------cchhhhhHHHHHHHHHhcCCCceEee
Confidence 443 3334567888999999887 887774
No 55
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=83.84 E-value=14 Score=29.16 Aligned_cols=100 Identities=18% Similarity=0.174 Sum_probs=57.0
Q ss_pred CCEEEEecCCHHHHHHHHHHHh---CCceEEEEecCCCCChHH-HHHHHHhhcCCceEEEccc--------hHHHhch-h
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQ---HRKFQCIVMENSPENKGH-ELAVSLAKSKIQTVLIPDS--------AMFGLIS-R 118 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~---~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~ds--------av~~~m~-~ 118 (165)
..+++|-|.+..+...+..+.. ++.-+|++. .|.+.+. ..+..+...|.++..++.. .+...+. +
T Consensus 62 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 139 (384)
T 1eg5_A 62 SEIFFTSCATESINWILKTVAETFEKRKRTIITT--PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED 139 (384)
T ss_dssp GGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEEC--TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT
T ss_pred CeEEEECCHHHHHHHHHHhhhhhccCCCCEEEEC--CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCC
Confidence 4677776666666666665541 334466664 4556554 3455567789888877632 2223332 2
Q ss_pred CCEEEEccceeecCCCeeehhcHHHHHHHHhhCC--CcEEE
Q psy2575 119 VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYS--IPYPC 157 (165)
Q Consensus 119 v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~--vPv~V 157 (165)
...|++ ...-.+.|.+.. -..++-+|++++ +++++
T Consensus 140 ~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 140 TFLVSI-MAANNEVGTIQP---VEDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp EEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEE-ECCCCCcccccC---HHHHHHHHHhcCCceEEEE
Confidence 333333 333334465555 267788889998 77765
No 56
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.81 E-value=8.8 Score=29.28 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=54.1
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--h-HHH-hchhCCEEEEcc
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--A-MFG-LISRVNKIIIGT 126 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--a-v~~-~m~~v~~VllGA 126 (165)
....|+.+|+++.-..+.....+ ..+ |+++|..|. .++.+. .|+++....-+ . +.. -+.++|.|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~-~g~-v~vid~~~~-----~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG-SEV-FVLAEDENV-----RKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT-SEE-EEEESCGGG-----HHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHh-CCe-EEEEECCHH-----HHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 45678899998766655554433 456 888887765 234455 67666443221 1 112 266788888754
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
+ +..-...+++.||+.+.+..++
T Consensus 80 ~---------~d~~n~~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 80 E---------SDSETIHCILGIRKIDESVRII 102 (234)
T ss_dssp S---------CHHHHHHHHHHHHHHCSSSEEE
T ss_pred C---------CcHHHHHHHHHHHHHCCCCeEE
Confidence 2 2345567888899987653433
No 57
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=83.76 E-value=16 Score=29.48 Aligned_cols=118 Identities=9% Similarity=0.003 Sum_probs=66.8
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...++ +....+++|-|.+..+...+.... ++.-+|++. .|.+.|... .+...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~ 142 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT-KPGDGVIII--TPVYYPFFM--AIKNQERKIIECEL 142 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEC--SSCCTHHHH--HHHTTTCEEEECCC
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEEc--CCCcHhHHH--HHHHcCCEEEeccc
Confidence 456788888765433 334567777766666655555443 333466664 466666543 33456777666553
Q ss_pred c-----------hHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 S-----------AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 s-----------av~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. .+-..+. +...|++ ...-.+.|.+...-=-..++-+|+++++++++
T Consensus 143 ~~~~g~~~~d~~~l~~~l~~~~~~~v~~-~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 143 LEKDGYYTIDFQKLEKLSKDKNNKALLF-CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp EEETTEEECCHHHHHHHHTCTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred ccCCCCEEEcHHHHHHHhccCCCcEEEE-cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 1 2223332 3434444 33333445555444345678889999998876
No 58
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.35 E-value=10 Score=27.61 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=50.5
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCC-ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--h-HHHh--chhCCEEEEc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHR-KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--A-MFGL--ISRVNKIIIG 125 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~-~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--a-v~~~--m~~v~~VllG 125 (165)
++.|+.+|++..=..+...+.+ . .++|++.|..|. -++.+.+.|+++.....+ . +... +.++|.|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA-RYGKISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 5678888998755555554443 3 467888887653 345567788876543221 1 2222 5567777765
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCC
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYS 152 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~ 152 (165)
... ......++..++..+
T Consensus 113 ~~~---------~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 113 MPH---------HQGNQTALEQLQRRN 130 (183)
T ss_dssp CSS---------HHHHHHHHHHHHHTT
T ss_pred CCC---------hHHHHHHHHHHHHHC
Confidence 421 233445566777766
No 59
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.34 E-value=7.6 Score=25.59 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=58.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---chHHHhchhCCEEEEccce
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---SAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---sav~~~m~~v~~VllGAd~ 128 (165)
+..|+..|.+..=..+.....+...++|++.+..|. -+..+...|+....... ..+...+.++|.|+..+-
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~- 78 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA-----ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP- 78 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH-----HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH-----HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC-
Confidence 457888888654455555554422378888875542 23344466666543322 345556777888886651
Q ss_pred eecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 129 VMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 129 V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
...+..++..|.+.+++++.++.
T Consensus 79 ---------~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 79 ---------FFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp ---------GGGHHHHHHHHHHTTCEEECCCS
T ss_pred ---------chhhHHHHHHHHHhCCCEEEecC
Confidence 22468889999999999887653
No 60
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=83.32 E-value=7.5 Score=29.87 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=54.9
Q ss_pred CEEEE-ecCCHHHHHHHHHHHh-----CCceEEEEecCCCC---ChHHHHHHHHhhcCCceEEE--ccc---hHHHhchh
Q psy2575 53 EIILT-LGYSKIVELFLKNAAQ-----HRKFQCIVMENSPE---NKGHELAVSLAKSKIQTVLI--PDS---AMFGLISR 118 (165)
Q Consensus 53 ~~ILT-~g~S~tV~~~L~~A~~-----~~~f~ViV~Es~P~---~eG~~la~~L~~~GI~v~~I--~ds---av~~~m~~ 118 (165)
..|+. +..|..-...|..|.+ +.+++++-+...+. ..-.++...|.+.|++++.. ... ++..+..+
T Consensus 155 ~~ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~ 234 (268)
T 3ab8_A 155 EGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGP 234 (268)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCT
T ss_pred CEEEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHh
Confidence 34444 6777766666655443 55677664433221 11234577788889887753 222 23333344
Q ss_pred CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 119 VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 119 v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.|.+++|+ .-.+-+ .|+..- -+.++..+||+++
T Consensus 235 ~dliV~G~---~~~~~~---~Gs~~~-~vl~~~~~pvlvv 267 (268)
T 3ab8_A 235 GDLLALGA---PVRRLV---FGSTAE-RVIRNAQGPVLTA 267 (268)
T ss_dssp TEEEEEEC---CCSCCS---SCCHHH-HHHHHCSSCEEEE
T ss_pred CCEEEECC---cccccE---eccHHH-HHHhcCCCCEEEe
Confidence 59999999 111222 344332 3346678999985
No 61
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=83.28 E-value=16 Score=29.10 Aligned_cols=118 Identities=8% Similarity=0.052 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...++. ....+++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 61 ~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~-~gd~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~ 135 (383)
T 3kax_A 61 PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTK-ENESVLVQP--PIYPPFF--EMVTTNNRQLCVSPL 135 (383)
T ss_dssp CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCC-TTCEEEECS--SCCHHHH--HHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCC-CCCEEEEcC--CCcHHHH--HHHHHcCCEEEeccc
Confidence 4567778887776653 345677777766565555554433 334666554 6666544 334557777766652
Q ss_pred -----------chHHHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----------SAMFGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----------sav~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+ ++...|++ ...-.+.|.+...---..++-+|+++++++++
T Consensus 136 ~~~~~~~~~d~~~l~~~l~~~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 136 QKQNDTYAIDFEHLEKQFQQGVKLMLL-CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp EEETTEEECCHHHHHHHHTTTCCEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eecCCcEEEcHHHHHHHhCcCCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEE
Confidence 1233333 34556655 33334455555544455667779999998886
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=83.23 E-value=10 Score=29.97 Aligned_cols=112 Identities=16% Similarity=0.108 Sum_probs=62.6
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc----
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---- 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---- 109 (165)
....++.+++.. -+....+++|-|.+..+...+..+ -+|++.+ |.+.+. ...+...|.++..++.
T Consensus 63 ~~~l~~~la~~~--~~~~~~i~~~~g~t~al~~~~~~~-----d~vi~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~ 131 (361)
T 3ftb_A 63 YRRLNKSIENYL--KLKDIGIVLGNGASEIIELSISLF-----EKILIIV--PSYAEY--EINAKKHGVSVVFSYLDENM 131 (361)
T ss_dssp CHHHHHHHHHHH--TCCSCEEEEESSHHHHHHHHHTTC-----SEEEEEE--SCCTHH--HHHHHHTTCEEEEEECCTTS
T ss_pred HHHHHHHHHHHh--CCCcceEEEcCCHHHHHHHHHHHc-----CcEEEec--CChHHH--HHHHHHcCCeEEEeecCccc
Confidence 356677777654 123445666655554544444432 3566653 555553 3344557888887763
Q ss_pred ----chHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 ----SAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 ----sav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+.+ .++++=...-.+.|.+...---..++-+|+++++++++
T Consensus 132 ~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 132 CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence 234444555 34443222233445555544455678888899998886
No 63
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=83.22 E-value=14 Score=29.80 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=60.6
Q ss_pred HHHHHHhcccCC---CCEEEEecCCHHHHHHHHHHH---hCCceEEEEecCCCCChHHH--HHHHHhhcCCceEEEccc-
Q psy2575 40 TAPSQACEHIHS---NEIILTLGYSKIVELFLKNAA---QHRKFQCIVMENSPENKGHE--LAVSLAKSKIQTVLIPDS- 110 (165)
Q Consensus 40 ~Ia~~a~~~I~~---~~~ILT~g~S~tV~~~L~~A~---~~~~f~ViV~Es~P~~eG~~--la~~L~~~GI~v~~I~ds- 110 (165)
...+..++++.. ..+++|-|.+..+...+..+. -++.-+|++.+ |.+.+.. +.......|.++..++..
T Consensus 76 ~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 153 (420)
T 1t3i_A 76 AVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTV--MEHHSNLVPWQMVAAKTGAVLKFVQLDE 153 (420)
T ss_dssp HHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEET--TCCGGGTHHHHHHHHHHCCEEEEECBCT
T ss_pred HHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECc--chhHHHHHHHHHHHHhcCcEEEEeccCC
Confidence 333444445544 567777776666666665541 23344677663 5555532 223334568888777632
Q ss_pred -------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+=.++++-...-.+.|.+.. -..++-+|+++++++++
T Consensus 154 ~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 154 QESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp TSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 222333321233332222233454444 46788889999998876
No 64
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=83.12 E-value=4.7 Score=31.89 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=55.3
Q ss_pred EEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---chHHHhchhCCEEEEcccee
Q psy2575 54 IILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---SAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 54 ~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---sav~~~m~~v~~VllGAd~V 129 (165)
+|++.|-+..+=. +.....+ +.++|+++.-.|. .-......|...|+.+..... .++..+++.+|.|+.-+
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a--- 87 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLK-LGHPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL--- 87 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHH-TTCCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC---
T ss_pred eEEEECCCchHHHHHHHHHHH-CCCcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC---
Confidence 6888876544422 2222222 3366776654443 222334556677876654332 34556667666665443
Q ss_pred ecCCCeeehhcHHHHHHHHhhCC-CcEEEE
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYS-IPYPCT 158 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 158 (165)
+...-.++..+.-+|++.+ ++-+|.
T Consensus 88 ----~~~~~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 88 ----AFPQILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp ----CGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred ----chhhhHHHHHHHHHHHhcCCCCEEEe
Confidence 3333567888888999887 887774
No 65
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=83.10 E-value=13 Score=29.92 Aligned_cols=120 Identities=8% Similarity=-0.024 Sum_probs=67.6
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEE--EecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEE
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIIL--TLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVL 106 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~IL--T~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~ 106 (165)
....++.+++..... +...++++ |-|.+..+...+..+.. ++.-+|++. .|.+.+... .+...|.++..
T Consensus 71 ~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~--~p~y~~~~~--~~~~~g~~~~~ 146 (396)
T 2q7w_A 71 IPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVS--NPSWPNHKS--VFNSAGLEVRE 146 (396)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEE--ESCCTHHHH--HHHHTTCEEEE
T ss_pred CHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEc--CCCchhHHH--HHHHcCCceEE
Confidence 466788888775332 34556666 77766666555543332 233466665 366666443 34457887776
Q ss_pred Ecc---c-------hHHHhchh---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 107 IPD---S-------AMFGLISR---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 107 I~d---s-------av~~~m~~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++. . .+...+.+ -+++++=+..-.+.|.+...-=-..++-+|+++++++++
T Consensus 147 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 147 YAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp EECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 653 1 23333332 144454343344456555443344688888999988775
No 66
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.95 E-value=5.5 Score=34.10 Aligned_cols=92 Identities=18% Similarity=0.156 Sum_probs=55.5
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchh-CCEEEEcccee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISR-VNKIIIGTHTV 129 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~-v~~VllGAd~V 129 (165)
.+..|+.+|...+=... .+....+.++|.+.|.++..+. ...+.|.+.||++.+-.+.. ..+.. +|.|+++.- |
T Consensus 8 ~~k~v~viG~G~sG~s~-A~~l~~~G~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~--~~~~~~~d~vv~spg-i 82 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAA-ARLLAKLGAIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPL--ELLDEDFCYMIKNPG-I 82 (451)
T ss_dssp TTCEEEEECCTTTHHHH-HHHHHHTTCEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCG--GGGGSCEEEEEECTT-S
T ss_pred CCCEEEEEeeCHHHHHH-HHHHHhCCCEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChH--HhhcCCCCEEEECCc-C
Confidence 36678887655433332 1112236689999999875332 35678999999887654432 24455 788887752 2
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEE
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYP 156 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 156 (165)
-. +.+....|++.++||+
T Consensus 83 ~~---------~~p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 83 PY---------NNPMVKKALEKQIPVL 100 (451)
T ss_dssp CT---------TSHHHHHHHHTTCCEE
T ss_pred CC---------CChhHHHHHHCCCcEE
Confidence 11 2345566677777765
No 67
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=82.88 E-value=12 Score=27.32 Aligned_cols=92 Identities=18% Similarity=0.185 Sum_probs=59.4
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhch
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLIS 117 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~ 117 (165)
..| ++++.+... =..++.-+++ ...|+++.++ -.++.|++.||+|+.+.. ..+...++
T Consensus 24 ~~g-vliSv~d~d-K~~l~~~a~~l~~lGf~i~AT~--------GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~ 93 (143)
T 2yvq_A 24 QKG-ILIGIQQSF-RPRFLGVAEQLHNEGFKLFATE--------ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR 93 (143)
T ss_dssp CSE-EEEECCGGG-HHHHHHHHHHHHTTTCEEEEEH--------HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHH
T ss_pred CCC-EEEEecccc-hHHHHHHHHHHHHCCCEEEECc--------hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHH
Confidence 456 666654321 1223322322 5789988773 357889999999999863 23555554
Q ss_pred --hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEE
Q psy2575 118 --RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYP 156 (165)
Q Consensus 118 --~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 156 (165)
++|.|+--.+. +--...-.+.+=.+|-.|+||++
T Consensus 94 ~g~i~lVInt~~~-----~~~~~~d~~~iRR~Av~~~IP~~ 129 (143)
T 2yvq_A 94 DGSIDLVINLPNN-----NTKFVHDNYVIRRTAVDSGIPLL 129 (143)
T ss_dssp TTSCCEEEECCCC-----CGGGHHHHHHHHHHHHHTTCCEE
T ss_pred CCCceEEEECCCC-----CCcCCccHHHHHHHHHHhCCCeE
Confidence 49999976543 11124567888899999999986
No 68
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=82.46 E-value=11 Score=26.84 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=57.8
Q ss_pred CEEEEecC-CHHHHHHHHHHHh-----CCceEEE-EecCCCCC------hHH----HHHHHHhhcCCceEE---Ecc-c-
Q psy2575 53 EIILTLGY-SKIVELFLKNAAQ-----HRKFQCI-VMENSPEN------KGH----ELAVSLAKSKIQTVL---IPD-S- 110 (165)
Q Consensus 53 ~~ILT~g~-S~tV~~~L~~A~~-----~~~f~Vi-V~Es~P~~------eG~----~la~~L~~~GI~v~~---I~d-s- 110 (165)
.+++-+.. |..-...|..|.+ +.++.++ |.+..+.. +.. ++.+.+.+.|+++.. +.. .
T Consensus 26 ~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~ 105 (155)
T 3dlo_A 26 PIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEP 105 (155)
T ss_dssp CEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCH
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCH
Confidence 34445777 8766666666554 5566655 44432211 111 235556678887764 322 2
Q ss_pred --hHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 111 --AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 111 --av~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+..+.. ++|.+++|+..--.-... -.|+.. --+.++.++||+|+
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~--~lGSv~-~~vl~~a~~PVLvV 154 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKRSPTGKL--IFGSVA-RDVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEECTTSCE--ECCHHH-HHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCE--EeccHH-HHHHHhCCCCEEEe
Confidence 2222334 599999999874322222 245543 34556788999986
No 69
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=82.46 E-value=17 Score=28.94 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=71.6
Q ss_pred ChHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCC--ceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 34 ANPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHR--KFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~--~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
....++.+++...++. ....+++|-|.+..+...+.... ++ .-+|++. .|.+.+... .+...|.++..+
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~-~~~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~ 135 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL-FDYQNPTIAYP--NPFYQIYEG--AAKFIKAKSLLM 135 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT-TTCSSCEEEEE--ESCCTHHHH--HHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc-CCCCCCEEEEe--cCCcHhHHH--HHHHcCCEEEEc
Confidence 3567888887765433 44567787777766665665543 33 4567766 355555433 355678888777
Q ss_pred ccchH-------HHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 108 PDSAM-------FGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 108 ~dsav-------~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+...- ...+ ++...|++- ..-.+.|.+...---..++-+|+++++++++
T Consensus 136 ~~~~~~~~~~~l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 136 PLTKENDFTPSLNEKELQEVDLVILN-SPNNPTGRTLSLEELISWVKLALKHDFILIN 192 (376)
T ss_dssp ECCGGGTSCCCCCHHHHHHCSEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCCcchhHHhhhccCCCEEEEc-CCCCCcCCCCCHHHHHHHHHHHHHcCcEEEE
Confidence 63321 1112 356666663 3334456666555556677789999998876
No 70
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=82.46 E-value=12 Score=29.10 Aligned_cols=32 Identities=28% Similarity=0.306 Sum_probs=23.4
Q ss_pred hCCEEEEccceeecCCCeeehh--c--HHHHHHHHh
Q psy2575 118 RVNKIIIGTHTVMANGGLRSVC--G--THAVALAAQ 149 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvnk~--G--T~~lAl~Ak 149 (165)
+.|..|+-+...-.+|.+.-.. + +..+|.+||
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~~~~~~~~~~~a~aA~ 183 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQLSARNFNPLIALAAD 183 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECCHHHHTTHHHHHHHEE
T ss_pred CCcEEEEEeecCCCCceEEEecCCccccHHHHHhcC
Confidence 5899999999999999987753 2 223555555
No 71
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=82.31 E-value=3 Score=33.08 Aligned_cols=91 Identities=12% Similarity=-0.003 Sum_probs=54.7
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
.|..||++|.+.....-+....+ +. +|.|++..+..+ ...|.+.| .++++...--...+..+|.|+...+.=
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA--~VtVvap~~~~~----l~~l~~~~-~i~~i~~~~~~~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGA--AITVVAPTVSAE----INEWEAKG-QLRVKRKKVGEEDLLNVFFIVVATNDQ 102 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCC--CEEEECSSCCHH----HHHHHHTT-SCEEECSCCCGGGSSSCSEEEECCCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCCCHH----HHHHHHcC-CcEEEECCCCHhHhCCCCEEEECCCCH
Confidence 57899999999877766665554 44 455555433322 23444443 345555443344567788888664331
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
-+ ...++..|+ .++||-++
T Consensus 103 -----~~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 103 -----AV----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp -----HH----HHHHHHHSC-TTCEEEC-
T ss_pred -----HH----HHHHHHHHh-CCCEEEEe
Confidence 12 345777888 99998875
No 72
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=82.27 E-value=13 Score=29.89 Aligned_cols=120 Identities=9% Similarity=-0.005 Sum_probs=67.5
Q ss_pred ChHHHHHHHHHH-hcccCCCCEEE--EecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQA-CEHIHSNEIIL--TLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a-~~~I~~~~~IL--T~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++.. ...+....+++ |.|.+..+...+..... .+.-+|++. .|.+.+... .+...|.++..++.
T Consensus 71 ~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~ 146 (394)
T 2ay1_A 71 EPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVS--DPTWPNHVS--IMNFMGLPVQTYRY 146 (394)
T ss_dssp CHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEE--ESCCHHHHH--HHHHHTCCEEEEEC
T ss_pred cHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEc--CCCChhHHH--HHHHcCCceEEEec
Confidence 467788888874 22234456776 77777666665544432 233456665 367766443 34446777776653
Q ss_pred ----------chHHHhchh---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 ----------SAMFGLISR---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 ----------sav~~~m~~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+.+ .+++++=...-.+.|.+...-=-..++-+|+++++++++
T Consensus 147 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp EETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 123333433 245555343334455544433233577888899988775
No 73
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=82.18 E-value=13 Score=30.47 Aligned_cols=119 Identities=8% Similarity=0.008 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHhccc----CCC--CEEEEecCCHHHHHHHHHHH-hCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 35 NPTSDTAPSQACEHI----HSN--EIILTLGYSKIVELFLKNAA-QHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I----~~~--~~ILT~g~S~tV~~~L~~A~-~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
...++.+++.....- ... ++++|-|.+..+...+.-.. -++.-+|++.+ |.+.+. ...+...|.++..+
T Consensus 95 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~--p~~~~~--~~~~~~~g~~~~~v 170 (420)
T 4f4e_A 95 AAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISD--PSWENH--RALFDMAGFEVVAY 170 (420)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEE--SCCHHH--HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeC--CCcHhH--HHHHHHcCCeEEEe
Confidence 567888887764432 344 67888888777666532221 13444677664 776654 33445578777776
Q ss_pred cc----------chHHHhch---hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 108 PD----------SAMFGLIS---RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 108 ~d----------sav~~~m~---~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+- ..+...+. .-+++++=...--+.|.+...---..++-+|+++++++++
T Consensus 171 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 171 PYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 53 12333343 2234444333344556666655566788889999988775
No 74
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=82.16 E-value=6.7 Score=26.82 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=34.1
Q ss_pred HHHHhhcCCceEEE--ccc---hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 94 AVSLAKSKIQTVLI--PDS---AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 94 a~~L~~~GI~v~~I--~ds---av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+.+.+.|++++.. ... .+..+.+++|.+++|+..- |++-...|+..- -+.++.++||+++
T Consensus 72 ~~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~~---~~~~~~~Gs~~~-~vl~~~~~pVlvv 137 (138)
T 3idf_A 72 STFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSEN---SFLNKIFASHQD-DFIQKAPIPVLIV 137 (138)
T ss_dssp HHHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCTT---STTSSCCCCTTC-HHHHHCSSCEEEE
T ss_pred HHHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCCc---chHHHHhCcHHH-HHHhcCCCCEEEe
Confidence 44455678775433 222 2223334899999998752 222222244332 3456778999985
No 75
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=81.96 E-value=16 Score=29.49 Aligned_cols=120 Identities=8% Similarity=-0.027 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEE--EecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHHHHHhhcCCceE
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIIL--TLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELAVSLAKSKIQTV 105 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~IL--T~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~ 105 (165)
....++.|++..... +...++++ |.|.+..+...+..... ++.-+|++.+ |.+.+. ...+...|.++.
T Consensus 73 ~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~--p~~~~~--~~~~~~~g~~~~ 148 (401)
T 7aat_A 73 LADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPK--PSWGNH--TPIFRDAGLQLQ 148 (401)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEE--SCCTTH--HHHHHHTTCEEE
T ss_pred CHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcC--CCchhH--HHHHHHcCCeeE
Confidence 357788888876543 33667766 77777666544433321 3344677664 655544 334456788887
Q ss_pred EEccc----------hHHHhchh---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 106 LIPDS----------AMFGLISR---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 106 ~I~ds----------av~~~m~~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.++.. .+...+++ -.++++=+..=-+.|.+...-=-..++-+|+++++.+++
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 77632 11112222 123322222223344444444456788889999987775
No 76
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=81.88 E-value=19 Score=29.54 Aligned_cols=118 Identities=8% Similarity=0.005 Sum_probs=68.8
Q ss_pred ChHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...+.. ....+++|-|.+..+...+..+. ++.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 98 ~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~-~~gd~Vi~~~--~~y~~~~~--~~~~~g~~~~~~~~ 172 (421)
T 3l8a_A 98 NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS-EKGDAVLINS--PVYYPFAR--TIRLNDHRLVENSL 172 (421)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTEEEEEEEE--SCCHHHHH--HHHHTTEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECC--CCcHHHHH--HHHHCCCEEEeccc
Confidence 3555667776655543 34457776666656666666543 3445677654 66666433 34446766665542
Q ss_pred -----------chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----------SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----------sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+-..+. ++..|++ ...-.+.|.+..+---..++-+|+++++++++
T Consensus 173 ~~~~~~~~~d~~~le~~i~~~~~~~vil-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 173 QIINGRFEIDFEQLEKDIIDNNVKIYLL-CSPHNPGGRVWDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp EEETTEEECCHHHHHHHHHHTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cccCCCeeeCHHHHHHHhhccCCeEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 23334443 4445554 33344456555555566788899999998876
No 77
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=81.27 E-value=17 Score=29.01 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=63.5
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch--
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA-- 111 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa-- 111 (165)
....++.+++.. -+....+++|-|.+..+...+... ++ -+|++.+ |.+.+... .+...|.++..++...
T Consensus 61 ~~~l~~~la~~~--~~~~~~v~~~~g~~~al~~~~~~~-~g--d~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~ 131 (364)
T 1lc5_A 61 YFHLHQALARHH--QVPASWILAGNGETESIFTVASGL-KP--RRAMIVT--PGFAEYGR--ALAQSGCEIRRWSLREAD 131 (364)
T ss_dssp CHHHHHHHHHHH--TSCGGGEEEESSHHHHHHHHHHHH-CC--SEEEEEE--SCCTHHHH--HHHHTTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHH--CcCHHHEEECCCHHHHHHHHHHHc-CC--CeEEEeC--CCcHHHHH--HHHHcCCeEEEEeCCccc
Confidence 345667776654 123346777777776666666655 33 4566653 66665433 3445688877776321
Q ss_pred -H---HHhc----hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 112 -M---FGLI----SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 112 -v---~~~m----~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. ..++ ++...+++ ...-.+.|.+...-=-..++-+|+++++++++
T Consensus 132 ~~~~l~~~~~~~~~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 132 GWQLTDAILEALTPDLDCLFL-CTPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp TTCCCTTHHHHCCTTCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccchhHHHHHhccCCCCEEEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 1 1122 23444444 22223445554433345677888999998876
No 78
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=81.11 E-value=9.2 Score=31.57 Aligned_cols=112 Identities=8% Similarity=-0.056 Sum_probs=62.5
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHH-HHHhhcCCceEEEccc---hH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELA-VSLAKSKIQTVLIPDS---AM 112 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la-~~L~~~GI~v~~I~ds---av 112 (165)
.+...+..++++...+.++|-|.+..+...|....+ +.-+|++. .|.+.|. ... ..+...|+++++++.. .+
T Consensus 68 ~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~~-~gd~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 144 (392)
T 3qhx_A 68 RTALEAALAAVEDAAFGRAFSSGMAAADCALRAMLR-PGDHVVIP--DDAYGGTFRLIDKVFTGWNVEYTPVALADLDAV 144 (392)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHCC-TTCEEEEE--TTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-CCCEEEEe--CCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHH
Confidence 444444445555555666666655555555554433 33466665 4555543 333 4456789999998743 33
Q ss_pred HHhchh-CCEEEEccceee-cCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 FGLISR-VNKIIIGTHTVM-ANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 ~~~m~~-v~~VllGAd~V~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+.. ...|++ +.+. +.|.+ .. -..++-+|+++++++++
T Consensus 145 ~~~i~~~~~~v~~--~~~~nptG~~-~~--l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 145 RAAIRPTTRLIWV--ETPTNPLLSI-AD--IAGIAQLGADSSAKVLV 186 (392)
T ss_dssp HHHCCTTEEEEEE--ESSCTTTCCC-CC--HHHHHHHHHHHTCEEEE
T ss_pred HHhhCCCCeEEEE--ECCCCCCcEE-ec--HHHHHHHHHHcCCEEEE
Confidence 333432 333332 2222 23333 32 45688899999998886
No 79
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=80.75 E-value=8.2 Score=31.18 Aligned_cols=69 Identities=7% Similarity=-0.012 Sum_probs=42.0
Q ss_pred cCCHHHHHHHHHHHh--CCceE---EEEecCCCCChHHHHHHHHh-hcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 59 GYSKIVELFLKNAAQ--HRKFQ---CIVMENSPENKGHELAVSLA-KSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~~f~---ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
-|+..+.+.+..+.+ +.+++ +|+.-+.|.++...-.+.|+ +. |+|+|--.
T Consensus 136 ~~d~~L~~~~~~~a~~~g~~~~~~Gv~~~~~Gp~fet~ae~~~~~~~~------------------------GadaV~Me 191 (270)
T 2a8y_A 136 PFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAESRTWREVY------------------------KADIIGMT 191 (270)
T ss_dssp CSCHHHHHHHHHHHHHHTCCEESCCEEEEECCSSCCCHHHHHHHHHTT------------------------CCCEEESS
T ss_pred ccCHHHHHHHHHHHHHcCCeEEcceEEEEecCCEecCHHHHHHHHHHc------------------------CCEEECCc
Confidence 356777666666654 43333 56655667776554444454 33 44444333
Q ss_pred CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+++.+|+++++||.+++
T Consensus 192 --------~a~ea~vA~~~gi~~~~i~ 210 (270)
T 2a8y_A 192 --------LVPEVNLACEAQMCYATIA 210 (270)
T ss_dssp --------HHHHHHHHHHTTCEEEEEE
T ss_pred --------HHHHHHHHHHCCCCEEEEE
Confidence 5778888888888888764
No 80
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=80.52 E-value=6.8 Score=28.63 Aligned_cols=89 Identities=8% Similarity=-0.038 Sum_probs=52.0
Q ss_pred HHHHHHHHhcccCCCCEEEEecCC--HHHHHHHHHHH-h-CCceE----------------EEEecCCCCChHHHHHHHH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYS--KIVELFLKNAA-Q-HRKFQ----------------CIVMENSPENKGHELAVSL 97 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S--~tV~~~L~~A~-~-~~~f~----------------ViV~Es~P~~eG~~la~~L 97 (165)
.+.-.+.+.+.|.+.+.|..+|.+ ..+...+.... + +++.. +++.-|.-..+-.+.++.+
T Consensus 26 ~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~a 105 (180)
T 1jeo_A 26 WKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKA 105 (180)
T ss_dssp HHHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHH
Confidence 334445566677777788887654 33433333222 2 32211 1111222223345668888
Q ss_pred hhcCCceEEEccchHHHhchhCCEEEEccc
Q psy2575 98 AKSKIQTVLIPDSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 98 ~~~GI~v~~I~dsav~~~m~~v~~VllGAd 127 (165)
++.|.++..|++..-. +.+.+|.++.-..
T Consensus 106 k~~g~~vi~IT~~~~s-l~~~ad~~l~~~~ 134 (180)
T 1jeo_A 106 KNINNNIIAIVCECGN-VVEFADLTIPLEV 134 (180)
T ss_dssp HTTCSCEEEEESSCCG-GGGGCSEEEECCC
T ss_pred HHCCCcEEEEeCCCCh-HHHhCCEEEEeCC
Confidence 9999999999997666 6677898876543
No 81
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=80.26 E-value=8.2 Score=30.44 Aligned_cols=98 Identities=9% Similarity=0.099 Sum_probs=54.3
Q ss_pred CEEEEecCCHHH-HHHHHHHHhCCceEEEEecCCC-C---ChHHHHHHHHhhcCCceEEEcc---chHHHhchhCCEEEE
Q psy2575 53 EIILTLGYSKIV-ELFLKNAAQHRKFQCIVMENSP-E---NKGHELAVSLAKSKIQTVLIPD---SAMFGLISRVNKIII 124 (165)
Q Consensus 53 ~~ILT~g~S~tV-~~~L~~A~~~~~f~ViV~Es~P-~---~eG~~la~~L~~~GI~v~~I~d---sav~~~m~~v~~Vll 124 (165)
.+|++.|-+..+ ..+.....+ +.++|+++.-+| . .+-.+....|...|+.+..... .++..+++.+|.|+.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLS-FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHH-TTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHh-CCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467777765443 222222222 336677665444 2 1222233445567766544322 345566676665554
Q ss_pred ccceeecCCCeeehhcHHHHHHHHhhCC-CcEEEE
Q psy2575 125 GTHTVMANGGLRSVCGTHAVALAAQHYS-IPYPCT 158 (165)
Q Consensus 125 GAd~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 158 (165)
-+ +.....++..+.-+|++.+ ++-+|.
T Consensus 84 ~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 84 AL-------PFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp CC-------CGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred CC-------CccchhhHHHHHHHHHHhCCccEEec
Confidence 33 3333577888988999888 887773
No 82
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=80.06 E-value=9.8 Score=30.82 Aligned_cols=90 Identities=12% Similarity=0.082 Sum_probs=56.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHh-----chhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGL-----ISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~-----m~~v~~VllGA 126 (165)
.+.|+..|+++.-..+.....+ ... |.++|..|. .++ +++.|+++... |..-... +.++|.|++..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~-~g~-v~vid~~~~-----~~~-~~~~~~~~i~g-d~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRG-SEV-FVLAEDENV-----RKK-VLRSGANFVHG-DPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGG-SCE-EEEESCGGG-----HHH-HHHTTCEEEES-CTTSHHHHHHTCSTTEEEEEECC
T ss_pred cCCEEEECCcHHHHHHHHHHHh-CCc-EEEEeCChh-----hhh-HHhCCcEEEEe-CCCCHHHHHhcChhhccEEEEcC
Confidence 4578999999877666655544 345 888887775 234 66678776543 3222222 45667776654
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+ +..-+..+++.||+.+.+..+++
T Consensus 186 ~---------~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 186 E---------SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp S---------SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred C---------ccHHHHHHHHHHHHHCCCCeEEE
Confidence 2 34567788999999987644444
No 83
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=80.05 E-value=11 Score=30.51 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=65.0
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...++ +....+++|-|.+..+...+..+.+ +.-+|++.+ |.+.+. ...+...|.++..++.
T Consensus 77 ~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~-~gd~vl~~~--p~~~~~--~~~~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 77 IPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLID-PGDVVITEN--PSYINT--LLAFEQLGAKIEGVPV 151 (407)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCHHH--HHHHHTTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcC-CCCEEEEeC--CChHHH--HHHHHHcCCEEEEccc
Confidence 356788888776442 2345677777766666666655533 334666654 666554 3345567887777653
Q ss_pred -------chHHHhch-------hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -------SAMFGLIS-------RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -------sav~~~m~-------~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+. +...|++-...-.+.|.+...-=-..++-+|+++++++++
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 22333443 2222222222222234433221113677889999998876
No 84
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=80.03 E-value=12 Score=25.59 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=23.8
Q ss_pred hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEE
Q psy2575 118 RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 158 (165)
++|.+++|+..- +++-. -.|+..- -+.++.++||+++
T Consensus 99 ~~dliV~G~~~~---~~~~~~~~Gs~~~-~vl~~~~~pVlvv 136 (137)
T 2z08_A 99 KADLIVMGTRGL---GALGSLFLGSQSQ-RVVAEAPCPVLLV 136 (137)
T ss_dssp TCSEEEEESSCT---TCCSCSSSCHHHH-HHHHHCSSCEEEE
T ss_pred CCCEEEECCCCC---chhhhhhhccHHH-HHHhcCCCCEEEe
Confidence 699999998752 22221 2455443 4456678999986
No 85
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=80.02 E-value=9.2 Score=30.77 Aligned_cols=119 Identities=11% Similarity=0.066 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHhcc-----cCCC-CEEEEecCCHHHHHHHHHHHh-CC---ceEEEEecCCCCChHHHHHHHHhhcCCc
Q psy2575 34 ANPTSDTAPSQACEH-----IHSN-EIILTLGYSKIVELFLKNAAQ-HR---KFQCIVMENSPENKGHELAVSLAKSKIQ 103 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~-----I~~~-~~ILT~g~S~tV~~~L~~A~~-~~---~f~ViV~Es~P~~eG~~la~~L~~~GI~ 103 (165)
....++.+++...++ +... .+++|-|.+..+...+....+ +. +-+|++. .|.+.+... .+...|.+
T Consensus 68 ~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~--~p~~~~~~~--~~~~~g~~ 143 (396)
T 3jtx_A 68 LPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSP--NPFYQIYEG--ATLLGGGE 143 (396)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEE--ESCCHHHHH--HHHHTTCE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEc--CCCcHhHHH--HHHHcCCE
Confidence 356788888876543 3355 778877766666655555533 21 1466665 466665443 35567888
Q ss_pred eEEEccc---------hHHHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 TVLIPDS---------AMFGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 v~~I~ds---------av~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++.. .+...+ ++...|++- ..-.+.|.+...---..++-+|+++++++++
T Consensus 144 ~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 144 IHFANCPAPSFNPDWRSISEEVWKRTKLVFVC-SPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHHHTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred EEEeecCCCCCccCHHHHHHhhccCcEEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 7777631 122222 234444442 3334456666665556688889999998876
No 86
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=79.95 E-value=14 Score=30.56 Aligned_cols=119 Identities=17% Similarity=0.108 Sum_probs=68.6
Q ss_pred ChHHHHHHHHHHhcc---cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc
Q psy2575 34 ANPTSDTAPSQACEH---IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS 110 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~---I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds 110 (165)
....++.+++..... +...++++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..+...|.++..++..
T Consensus 98 ~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~-~gd~vl~~~--p~~~~~~--~~~~~~g~~~~~~~~~ 172 (427)
T 3dyd_A 98 FLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLAN-PGQNILVPR--PGFSLYK--TLAESMGIEVKLYNLL 172 (427)
T ss_dssp CHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCC-TTCEEEEEE--SCCTHHH--HHHHHTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcC-CCCEEEEcC--CCchhHH--HHHHHcCCEEEEEecc
Confidence 456788888765433 4456788887777666666555443 344676663 6665543 3455678877766532
Q ss_pred ----------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ----------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ----------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+-.++++=...--+.|.+..+---..++-+|+++++++++
T Consensus 173 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 173 PEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp GGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 12222322122222222223455555554467788899999998876
No 87
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=79.95 E-value=11 Score=29.79 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=63.0
Q ss_pred CCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCC------------------ChHHHHHHHHhhc--CCceEEEc--
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPE------------------NKGHELAVSLAKS--KIQTVLIP-- 108 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~------------------~eG~~la~~L~~~--GI~v~~I~-- 108 (165)
+..|+.+|-+..=..+.....+ |.. ++.++|..+. ..-..+++.|.+. +++++.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 4578899988665555555554 422 5556665541 2334567777764 46666544
Q ss_pred --cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 109 --DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 109 --dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+..+..+++++|.|+...|..- --..+...|+.+++|++..+
T Consensus 110 ~~~~~~~~~~~~~DvVi~~~d~~~---------~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 110 LDDAELAALIAEHDLVLDCTDNVA---------VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp CCHHHHHHHHHTSSEEEECCSSHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred CCHhHHHHHHhCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEee
Confidence 2344556788999998876432 33677788899999998764
No 88
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=79.84 E-value=13 Score=29.53 Aligned_cols=97 Identities=8% Similarity=-0.025 Sum_probs=57.6
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--------chHHHhch--hCCEEE
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--------SAMFGLIS--RVNKII 123 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--------sav~~~m~--~v~~Vl 123 (165)
+++|-|.+..+...+.... ++.-+|++.+ |..-|..+...+...|.++..++. ..+-..+. +...|+
T Consensus 77 v~~~~gg~~al~~~~~~~~-~~gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~ 153 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFNLL-EPGDSFLTGT--NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLF 153 (393)
T ss_dssp EEESCCTTTHHHHHHHHHC-CTTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEE
T ss_pred EEEeCCcHHHHHHHHHhcC-CCCCEEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEE
Confidence 6677777767666666553 3445677763 444555556667778988877762 22333343 344444
Q ss_pred EccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 124 IGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 124 lGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+- ..-.+.|.+.. --.++-+|+++++++++
T Consensus 154 ~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 154 LV-HGESSTGVVQP---LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp EE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred Ee-ccCCcchhhcc---HHHHHHHHHHcCCEEEE
Confidence 33 33333454443 23578889999998886
No 89
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=79.75 E-value=16 Score=28.84 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=61.4
Q ss_pred HHHHHHHHhccc--CCCCEEEEecCCHHHHHHHHHHHhC------------CceEEEEecCCCCChHHHHHHHHhhcCCc
Q psy2575 38 SDTAPSQACEHI--HSNEIILTLGYSKIVELFLKNAAQH------------RKFQCIVMENSPENKGHELAVSLAKSKIQ 103 (165)
Q Consensus 38 ~~~Ia~~a~~~I--~~~~~ILT~g~S~tV~~~L~~A~~~------------~~f~ViV~Es~P~~eG~~la~~L~~~GI~ 103 (165)
.+.+.+..++++ ...++++|-|.+..+...+..+.+. +.-+|++.+ |.+.+ ....+...|++
T Consensus 71 ~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~--~~~~~--~~~~~~~~g~~ 146 (397)
T 3f9t_A 71 EEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI--TAHFS--FEKGREMMDLE 146 (397)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET--TCCTH--HHHHHHHHTCE
T ss_pred HHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC--cchhH--HHHHHHHcCce
Confidence 344444445555 3345677777666655555544321 245677664 44444 33334445888
Q ss_pred eEEEccc--------hHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 TVLIPDS--------AMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 v~~I~ds--------av~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++.. .+-..+.+ ...|++-. .-.+.|.+.. -..++-+|+++++++++
T Consensus 147 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 147 YIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIA-GTTELGTIDN---IEELSKIAKENNIYIHV 206 (397)
T ss_dssp EEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEB-SCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred eEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEEC-CCCCCCCCCC---HHHHHHHHHHhCCeEEE
Confidence 8888743 23333433 33444332 3345555433 44588889999998886
No 90
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=79.63 E-value=1.7 Score=33.10 Aligned_cols=72 Identities=8% Similarity=0.133 Sum_probs=42.5
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHH----HHHHHHhhCCC
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTH----AVALAAQHYSI 153 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~----~lAl~Ak~~~v 153 (165)
+|.|+|---.+ =+.+++.|++.|.+++++.+. .-+.++|.+++. -|+-....+.. .+...+++.++
T Consensus 4 ~I~iiD~g~~n-~~si~~al~~~G~~~~v~~~~---~~l~~~D~lilP------G~g~~~~~~~~~~~~~~i~~~~~~~~ 73 (211)
T 4gud_A 4 NVVIIDTGCAN-ISSVKFAIERLGYAVTISRDP---QVVLAADKLFLP------GVGTASEAMKNLTERDLIELVKRVEK 73 (211)
T ss_dssp CEEEECCCCTT-HHHHHHHHHHTTCCEEEECCH---HHHHHCSEEEEC------CCSCHHHHHHHHHHTTCHHHHHHCCS
T ss_pred EEEEEECCCCh-HHHHHHHHHHCCCEEEEECCH---HHHhCCCEEEEC------CCCCHHHHHHHHHhcChHHHHHHcCC
Confidence 45666522111 145789999999999988764 346678877762 12221111111 12234567899
Q ss_pred cEEEEe
Q psy2575 154 PYPCTF 159 (165)
Q Consensus 154 Pv~V~~ 159 (165)
|++-+|
T Consensus 74 PvlGIC 79 (211)
T 4gud_A 74 PLLGIC 79 (211)
T ss_dssp CEEEET
T ss_pred CEEEEc
Confidence 999877
No 91
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=79.47 E-value=12 Score=30.16 Aligned_cols=69 Identities=7% Similarity=-0.051 Sum_probs=41.1
Q ss_pred cCCHHHHHHHHHHHh--CCceE---EEEecCCCCChHHHHHHHHh-hcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 59 GYSKIVELFLKNAAQ--HRKFQ---CIVMENSPENKGHELAVSLA-KSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~~f~---ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
-|+..+.+.+..+.+ +.+++ +|+.-+.|.++...-.+.|+ +. |+|+|--.
T Consensus 141 ~~d~~L~~~l~~~a~~~g~~~~~~Gv~~~~~Gp~f~t~ae~~~~~~~~------------------------GadaV~Me 196 (275)
T 1wta_A 141 PFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESRVWKDVF------------------------KADIIGMT 196 (275)
T ss_dssp CSCHHHHHHHHHHHHHHTCCEESCCEEEEECCSSCCCHHHHHHHHHTS------------------------CCSEEESS
T ss_pred ccCHHHHHHHHHHHHHcCCceecceEEEEecCCEecCHHHHHHHHHHc------------------------CCEEEccc
Confidence 356666666665554 43333 55555667766543344444 33 45554433
Q ss_pred CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+++.+|+++++|+.+++
T Consensus 197 --------~a~ea~vA~~~gi~~~~i~ 215 (275)
T 1wta_A 197 --------LVPEINLACEAQLCYATLA 215 (275)
T ss_dssp --------HHHHHHHHHHTTCEEEEEE
T ss_pred --------HHHHHHHHHHCCCCEEEEE
Confidence 6778888888888888764
No 92
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=79.47 E-value=18 Score=29.30 Aligned_cols=120 Identities=8% Similarity=-0.016 Sum_probs=67.5
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEE--EecCCHHHHHHHHHHHh-CCc-----eEEEEecCCCCChHHHHHHHHhhcC
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIIL--TLGYSKIVELFLKNAAQ-HRK-----FQCIVMENSPENKGHELAVSLAKSK 101 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~IL--T~g~S~tV~~~L~~A~~-~~~-----f~ViV~Es~P~~eG~~la~~L~~~G 101 (165)
....++.+++..... +....+++ |-|.+..+...+.-+.. ++. -+|++.+ |.+.+.. ..+...|
T Consensus 76 ~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~--p~y~~~~--~~~~~~g 151 (412)
T 1ajs_A 76 LAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSS--PTWENHN--GVFTTAG 151 (412)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEE--SCCTHHH--HHHHHTT
T ss_pred CHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcC--CCcHHHH--HHHHHcC
Confidence 366788888766332 24567888 88877766665432211 233 4677664 6666543 3344568
Q ss_pred Cc-eEEEcc----------chHHHhchh---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 102 IQ-TVLIPD----------SAMFGLISR---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 102 I~-v~~I~d----------sav~~~m~~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+ +..++. ..+...+.+ -+++++-+..-.+.|.+...-=-..++-+|+++++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 152 FKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp CSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 77 766653 123333332 124443344444555554443334678888999988876
No 93
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=79.38 E-value=14 Score=30.37 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=67.3
Q ss_pred ChHHHHHHHHHHhcc-----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH-----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~-----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++.-.+. +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++
T Consensus 87 ~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vl~~~--p~y~~~~--~~~~~~g~~~~~v~ 161 (425)
T 1vp4_A 87 DPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFL-DDESYCVLDD--PAYLGAI--NAFRQYLANFVVVP 161 (425)
T ss_dssp CHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHC-CTTCEEEEEE--SCCHHHH--HHHHTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhC-CCCCEEEEeC--CCcHHHH--HHHHHcCCEEEEec
Confidence 357788888876443 344578888887766665555443 3334666653 6665543 33445787777665
Q ss_pred c-------chHHHhch---------hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 D-------SAMFGLIS---------RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 d-------sav~~~m~---------~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. ..+...+. +...|++-...-.+.|.+...-=-..++-+|+++++++++
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 12333333 2333323222223345544332234678889999998876
No 94
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=79.21 E-value=5.8 Score=32.67 Aligned_cols=69 Identities=16% Similarity=0.074 Sum_probs=40.9
Q ss_pred cCCHHHHHHHHHHHh--CCceE--EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCC
Q psy2575 59 GYSKIVELFLKNAAQ--HRKFQ--CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGG 134 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~~f~--ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~ 134 (165)
-|+..+.+.+..+.+ +.+++ +|+.-+.|.++...-.+.+++. |+|+|--.
T Consensus 171 ~~d~~L~~~a~~aA~~~gi~~~~Gvy~~~~Gp~feT~AE~~~~r~~------------------------GadaVgMe-- 224 (287)
T 3odg_A 171 AYDKDLRADMAKIAQQLDIPLTEGVFVSYPGPCFETPAEIRMMQII------------------------GGDVVGMS-- 224 (287)
T ss_dssp SSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEESS--
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEEEEEecCCccCCHHHHHHHHHc------------------------CCEEEeCc--
Confidence 346666666665554 43333 5666667777654333344333 55555444
Q ss_pred eeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 135 LRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 135 vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.+.+|+++++|+.+++
T Consensus 225 ------~~pea~vA~~~gi~~~~I~ 243 (287)
T 3odg_A 225 ------VVPEVLSAAHCGLKVIALT 243 (287)
T ss_dssp ------SHHHHHHHHHHTCEEEEEE
T ss_pred ------HHHHHHHHHHcCCCEEEEE
Confidence 4678888888888888764
No 95
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=79.10 E-value=22 Score=28.15 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhcccCCC--C-EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---
Q psy2575 36 PTSDTAPSQACEHIHSN--E-IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--- 109 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~--~-~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--- 109 (165)
...+.+.+...+++.-. + +++|-|.+..+...+....+ +.-+|++. .|.+.|..+...+...|.++..++.
T Consensus 53 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~-~gd~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 53 KVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVS-KGGKVLVT--IIGAFGKRYKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp HHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSC-TTCEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhc-CCCeEEEE--cCCchhHHHHHHHHHhCCceEEEecCCC
Confidence 44556666655655432 4 45555555555555554433 34467666 3566664455556667888777653
Q ss_pred -----chHHHhc---hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----SAMFGLI---SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----sav~~~m---~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+ ++...|++- ..-.+.|.+. . -..++-+|+++++++++
T Consensus 130 ~~~d~~~l~~~l~~~~~~~~v~~~-~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNPDVEAVTIT-YNETSTGVLN-P--LPELAKVAKEHDKLVFV 181 (386)
T ss_dssp CCCCHHHHHHHHHHCTTCCEEEEE-SEETTTTEEC-C--HHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEE-eecCCcchhC-C--HHHHHHHHHHcCCeEEE
Confidence 2233344 234445543 3334445443 3 36788889999998876
No 96
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=78.89 E-value=24 Score=28.45 Aligned_cols=118 Identities=9% Similarity=0.042 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh------CCceEEEEecCCCCChHHHH-HHHHhhcCCc----
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ------HRKFQCIVMENSPENKGHEL-AVSLAKSKIQ---- 103 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~------~~~f~ViV~Es~P~~eG~~l-a~~L~~~GI~---- 103 (165)
....+.+.+..++++....+++|-|.+..+...+..+.. ..+-+|++.+ |.+.|... +-.+ .|.+
T Consensus 81 ~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~--~~yh~~~~~~~~~--~g~~~~~~ 156 (397)
T 2ord_A 81 NRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAH--NSFHGRTLGSLTA--TGQPKYQK 156 (397)
T ss_dssp EHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEB--TCCCCSSHHHHHH--SBCHHHHG
T ss_pred CHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEc--CCcCCCchhhhhc--cCChhhcc
Confidence 344556666666666655677777777666666655432 1233577765 23322111 1111 2222
Q ss_pred --------eEEEcc---chHHHhch-hCCEEEEccceeecCCC-eeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 --------TVLIPD---SAMFGLIS-RVNKIIIGTHTVMANGG-LRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 --------v~~I~d---sav~~~m~-~v~~VllGAd~V~~nG~-vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++. ..+...+. +...|++-. .-.+.|. +....=-..++-+|+++++++++
T Consensus 157 ~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~l~~l~~~~~~~li~ 222 (397)
T 2ord_A 157 PFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEP-IQGESGIVPATKEFLEEARKLCDEYDALLVF 222 (397)
T ss_dssp GGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECS-EECTTTCEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 555542 22333343 233333322 2223344 33333335678889999998876
No 97
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=78.72 E-value=8.6 Score=28.18 Aligned_cols=61 Identities=15% Similarity=-0.000 Sum_probs=37.8
Q ss_pred HHHHHhhcCCceEEEc-cchH-HH---hchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 93 LAVSLAKSKIQTVLIP-DSAM-FG---LISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 93 la~~L~~~GI~v~~I~-dsav-~~---~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
++..|...|+++..++ +... .. .+.+=|.+|+= ...|. ..-+..++-.||..+.|++.++.
T Consensus 57 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~i----S~sG~---t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 57 LGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGV----SVWRY---LRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp HHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEE----CCSSC---CHHHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEE----eCCCC---CHHHHHHHHHHHHCCCCEEEEeC
Confidence 5566666788888887 3322 22 22333444432 22342 34577788899999999999875
No 98
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=78.66 E-value=6.1 Score=32.40 Aligned_cols=82 Identities=16% Similarity=0.044 Sum_probs=55.1
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~ 130 (165)
.|+.|..+|+=+.+.+.+. +.++++|.|-.|.. |. .+|.+..+++++||.|++-+.++
T Consensus 140 ~g~kV~vIG~fP~i~~~~~-----~~~~l~V~E~~p~~------------g~----~p~~~~~~~lp~~D~viiTgstl- 197 (270)
T 3l5o_A 140 KGKKVGVVGHFPHLESLLE-----PICDLSILEWSPEE------------GD----YPLPASEFILPECDYVYITCASV- 197 (270)
T ss_dssp TTSEEEEESCCTTHHHHHT-----TTSEEEEEESSCCT------------TC----EEGGGHHHHGGGCSEEEEETHHH-
T ss_pred CCCEEEEECCchhHHHHHh-----cCCCEEEEECCCCC------------CC----CChhHHHHhhccCCEEEEEeehh-
Confidence 4789999999877665543 45688899988852 21 47888899999999999987663
Q ss_pred cCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 131 ANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 131 ~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+| ||..--+.-.+....|+++.|+
T Consensus 198 -----vN--~Tl~~lL~~~~~a~~vvl~GPS 221 (270)
T 3l5o_A 198 -----VD--KTLPRLLELSRNARRITLVGPG 221 (270)
T ss_dssp -----HH--TCHHHHHHHTTTSSEEEEESTT
T ss_pred -----hc--CCHHHHHhhCCCCCEEEEECCC
Confidence 33 2333222223344566666665
No 99
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=78.40 E-value=17 Score=28.95 Aligned_cols=110 Identities=12% Similarity=0.038 Sum_probs=59.3
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc-------
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS------- 110 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds------- 110 (165)
.+...+..++++...+.++|-|.+..+...+..+.-++.-+|++. .|.+.+.. ..+...|.++..++..
T Consensus 40 ~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~ 115 (374)
T 3uwc_A 40 LEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITC--ANTFIASV--GAIVQAGATPVLVDSENGYVIDP 115 (374)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTSSBCG
T ss_pred HHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC--CCccHHHH--HHHHHcCCEEEEEecCCCCCcCH
Confidence 334444444566555777777666555555554412344466665 35555543 3456789888888743
Q ss_pred -hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+=.++++ . .-+.|.+.. -..++-+|+++++++++
T Consensus 116 ~~l~~~~~~~~~~v~-~--~n~~G~~~~---~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 116 EKIEAAITDKTKAIM-P--VHYTGNIAD---MPALAKIAKKHNLHIVE 157 (374)
T ss_dssp GGTGGGCCTTEEEEC-C--BCGGGCCCC---HHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCCCceEEE-E--eCCcCCcCC---HHHHHHHHHHcCCEEEE
Confidence 12222222123333 1 112333221 35688889999999887
No 100
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=78.08 E-value=19 Score=29.22 Aligned_cols=117 Identities=8% Similarity=0.003 Sum_probs=64.3
Q ss_pred ChHHHHHHHHHHh-cccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCc-eEEEccch
Q psy2575 34 ANPTSDTAPSQAC-EHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQ-TVLIPDSA 111 (165)
Q Consensus 34 ~~~~~~~Ia~~a~-~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~-v~~I~dsa 111 (165)
....++.+++... ..+....+++|-|.+..+..+ ....+ +.-+|++.+ |.+.+.. ..+...|.+ +..++...
T Consensus 77 ~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~-~~~~~-~gd~Vl~~~--p~y~~~~--~~~~~~g~~~~~~~~~~~ 150 (400)
T 3asa_A 77 LPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL-LSFFG-PNQTVAIQD--PSYPAYL--DIARLTGAKEIIALPCLQ 150 (400)
T ss_dssp CHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH-HHHHC-SSCEEEEEE--SCCHHHH--HHHHHTTCSEEEEEECCG
T ss_pred CHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH-HHHcC-CCCEEEECC--CCcHHHH--HHHHHcCCcceEecccch
Confidence 3567888887621 113445677777766555543 33433 334666653 6676644 334557887 77776332
Q ss_pred HHHh---c---hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 112 MFGL---I---SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 112 v~~~---m---~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
-..+ + ++...|++. ..-.+.|.+...-=-..++-+|+++++++++
T Consensus 151 ~~~~~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 151 ENAFFPEFPEDTHIDILCLC-SPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp GGTTCCCCCTTCCCSEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCcccChhhccCccEEEEe-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 1111 1 234555553 2223445554433234577789999988775
No 101
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=78.06 E-value=16 Score=28.04 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=57.3
Q ss_pred EEEEecCCHHHHHHHHHHHhCC--ceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--c-chHHHhchhCCEEEEccce
Q psy2575 54 IILTLGYSKIVELFLKNAAQHR--KFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--D-SAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~--~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--d-sav~~~m~~v~~VllGAd~ 128 (165)
+|++.|.+..+=..+......+ .++|+++..+|... ..|...++.+.... | ..+..+++.+|.|+--|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-----STLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-----HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-----hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 4677777665544333333223 67788776554321 23334555543322 1 3456667778877754432
Q ss_pred eecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 129 VMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 129 V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.. +.-+|-.|+..+.-+|++.+++-+|...
T Consensus 77 -~~-~~~~n~~~~~~l~~a~~~~~~~~~v~~S 106 (287)
T 2jl1_A 77 -HY-DNTLLIVQHANVVKAARDAGVKHIAYTG 106 (287)
T ss_dssp -CS-CHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred -Cc-CchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 11 1123678999999999999986666544
No 102
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=78.06 E-value=8.6 Score=31.56 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=41.1
Q ss_pred cCCHHHHHHHHHHHh--CCc--e--EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 59 GYSKIVELFLKNAAQ--HRK--F--QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~~--f--~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
-|+..+.+.+.++.+ +.+ + =+|++-+.|.++...=.+.+++. |+|+|--.
T Consensus 165 ~~d~~L~~~~~~~a~~~gi~~~~~~Gvy~~~~Gp~feT~AE~~~~r~~------------------------Gad~VgMe 220 (284)
T 3fuc_A 165 AYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNL------------------------GADAVGMS 220 (284)
T ss_dssp CSCHHHHHHHHHHHHHHTCSSCCEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCCcceEeeEEEEecCCEEcCHHHHHHHHHc------------------------CCcEEecC
Confidence 456666666655554 322 2 26666666776644323333333 56665544
Q ss_pred CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
|.+.+.+|+++++|+..++
T Consensus 221 --------~~pea~lAr~~gi~~~~I~ 239 (284)
T 3fuc_A 221 --------TVPEVIVARHCGLRVFGFS 239 (284)
T ss_dssp --------SHHHHHHHHHTTCEEEEEE
T ss_pred --------HHHHHHHHHHcCCCEEEEE
Confidence 5778888888888888764
No 103
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=78.05 E-value=4.6 Score=33.02 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=66.0
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
+-|.++.+-....+...+..+.+ +.+.-|++.+.-|..+-.++.+..++.|+ .++-.+.++.+-+...+....+...
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~ 147 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV--KIIGPNTPGIASPKVGKLGIIPMEV 147 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEECSSCCEEEETTTEEEECCCGGG
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCceeeccCcceeeecccCC
Confidence 45888888888888888888877 44434444565565555677777777876 3565555555545433322222223
Q ss_pred ecCC--CeeehhcHHHHHH--HHhhCCCcEE
Q psy2575 130 MANG--GLRSVCGTHAVAL--AAQHYSIPYP 156 (165)
Q Consensus 130 ~~nG--~vvnk~GT~~lAl--~Ak~~~vPv~ 156 (165)
..-| +++++.|+...++ .+.+.++.|-
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 178 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVS 178 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeE
Confidence 3334 6899999988776 4566777765
No 104
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=77.95 E-value=25 Score=28.05 Aligned_cols=110 Identities=9% Similarity=0.033 Sum_probs=58.9
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHH---HHHHh---hcCCceEEEc--c-chHHHhchhCCE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL---AVSLA---KSKIQTVLIP--D-SAMFGLISRVNK 121 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~l---a~~L~---~~GI~v~~I~--d-sav~~~m~~v~~ 121 (165)
.+.+||+.|.+.-+=..|......+..+|+++..++......+ .+.+. ..++.+.... | .++..++.++|.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 3568888888766644333322224468888765543222222 22221 1344333221 1 245556676777
Q ss_pred EEEccceeecC---CC-----eeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 122 IIIGTHTVMAN---GG-----LRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 122 VllGAd~V~~n---G~-----vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|+--|-..... .. -+|-.|+..++-+|+..+++-+|...
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 152 (352)
T 1sb8_A 106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAA 152 (352)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 76554321100 00 14678999999999999887665543
No 105
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=77.92 E-value=9.5 Score=30.89 Aligned_cols=69 Identities=14% Similarity=0.012 Sum_probs=43.7
Q ss_pred cCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeeh
Q psy2575 59 GYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSV 138 (165)
Q Consensus 59 g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk 138 (165)
-|+..+.+.+..+.+.-+--||+.-+.|.++...-.+.+++. |+|+|--.
T Consensus 158 ~~d~~L~~~~~~~a~~~~~Gvy~~~~Gp~feT~aE~~~~r~~------------------------Gad~VgMe------ 207 (266)
T 1qe5_A 158 VYSPRLRELAHRVDPTLPEGVYAQFPGPHYETPAEVRMAGIL------------------------GADLVGMS------ 207 (266)
T ss_dssp SBCHHHHHHHHHHCTTCCEEEEEECCCSSCCCHHHHHHHHHH------------------------TCSEEESS------
T ss_pred ccCHHHHHHHHHHHHHhCCCeEEEeeCCEEeCHHHHHHHHHc------------------------CCeEEecC------
Confidence 356666666666655333457877788877655444444333 55555444
Q ss_pred hcHHHHHHHHhhCCCcEEEEe
Q psy2575 139 CGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 139 ~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
|.+.|.+|+++++||..++
T Consensus 208 --~~pea~lAr~~gi~~~~i~ 226 (266)
T 1qe5_A 208 --TTLEAIAARHCGLEVLGVS 226 (266)
T ss_dssp --SHHHHHHHHHTTCEEEEEE
T ss_pred --hHHHHHHHHHCCCCEEEEE
Confidence 4678888888888887654
No 106
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=77.83 E-value=11 Score=32.85 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=53.4
Q ss_pred CCCCEEEEecCCHH----HHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEc
Q psy2575 50 HSNEIILTLGYSKI----VELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIG 125 (165)
Q Consensus 50 ~~~~~ILT~g~S~t----V~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllG 125 (165)
.+...|+.+|-..+ +.++|. .+.++|.+.|.++. .....|.+.|+++.+-.+.. .+..+|.|+++
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~----~~G~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~S 88 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLA----NEGYQISGSDLAPN----SVTQHLTALGAQIYFHHRPE---NVLDASVVVVS 88 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHH----HTTCEEEEECSSCC----HHHHHHHHTTCEEESSCCGG---GGTTCSEEEEC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHH----hCCCeEEEEECCCC----HHHHHHHHCCCEEECCCCHH---HcCCCCEEEEC
Confidence 34567877764422 233333 36789999998764 34567999999887644432 35678888887
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCCCcEE
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYSIPYP 156 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 156 (165)
. +|-. +.+.-..|++.++||+
T Consensus 89 p-gi~~---------~~p~~~~a~~~gi~v~ 109 (494)
T 4hv4_A 89 T-AISA---------DNPEIVAAREARIPVI 109 (494)
T ss_dssp T-TSCT---------TCHHHHHHHHTTCCEE
T ss_pred C-CCCC---------CCHHHHHHHHCCCCEE
Confidence 6 2222 2345566777777776
No 107
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=77.73 E-value=7.6 Score=30.35 Aligned_cols=96 Identities=16% Similarity=0.066 Sum_probs=51.8
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--------chHHHhch--hCCEE
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--------SAMFGLIS--RVNKI 122 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--------sav~~~m~--~v~~V 122 (165)
.+++|-|.+..+...+.... + -+|++.+ |.+.+..+...+...|.++..++- ..+...+. +...|
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~-~--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v 128 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLD-R--GPVLVLV--NGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMV 128 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCS-C--CCEEEEE--CSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEE
T ss_pred eEEEcCCcHHHHHHHHHHhc-C--CcEEEEc--CCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEE
Confidence 35555554444444443332 2 3566653 344444344555667888877762 12333333 34444
Q ss_pred EEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 123 IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 123 llGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++ ...-.+.|.+.. -..++-+|+++++++++
T Consensus 129 ~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 129 AL-VHGETSTGVLNP---AEAIGALAKEAGALFFL 159 (353)
T ss_dssp EE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EE-EccCCCcceecC---HHHHHHHHHHcCCeEEE
Confidence 43 334445565554 34788889999998876
No 108
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=77.70 E-value=13 Score=32.51 Aligned_cols=91 Identities=11% Similarity=-0.007 Sum_probs=56.2
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~ 130 (165)
.+..|..+|-+.+=...+......+.++|.+.|.++... +.+.|.+.||++.+-.+. ..+..++|.|++++ +|-
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~---~~~~L~~~gi~~~~G~~~--~~~~~~~d~vV~Sp-gi~ 91 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPP---MSTQLEQAGVTIEEGYLI--AHLQPAPDLVVVGN-AMK 91 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTT---HHHHHHHTTCEEEESCCG--GGGCSCCSEEEECT-TCC
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcH---HHHHHHHCCCEEECCCCH--HHcCCCCCEEEECC-CcC
Confidence 356777776554444333333334678999999886543 567888999988765432 23335688888876 222
Q ss_pred cCCCeeehhcHHHHHHHHhhCCCcEE
Q psy2575 131 ANGGLRSVCGTHAVALAAQHYSIPYP 156 (165)
Q Consensus 131 ~nG~vvnk~GT~~lAl~Ak~~~vPv~ 156 (165)
.+ .+.-..|++.++||+
T Consensus 92 ~~---------~p~l~~a~~~gi~v~ 108 (524)
T 3hn7_A 92 RG---------MDVIEYMLDTGLRYT 108 (524)
T ss_dssp TT---------SHHHHHHHHHTCCEE
T ss_pred CC---------CHHHHHHHHCCCcEE
Confidence 22 344456677777776
No 109
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=77.48 E-value=20 Score=27.99 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=54.2
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--cchHHHhchhCCEEEEccceee
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--DSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--dsav~~~m~~v~~VllGAd~V~ 130 (165)
.+||+.|.+..+=..|......+..+|+++.-+|...- |. ++.+.... ...+..+++++|.|+--|-...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~ 74 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA------IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAATRG 74 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCCHHHHHHHTTTCSEEEECCCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc------CC--ceEEEEccccHHHHHHhhcCCCEEEEccccCC
Confidence 47888887766544333333224567887765543211 21 44443222 2334556666777765443221
Q ss_pred cC----CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 131 AN----GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 131 ~n----G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.+ ---.|-.|+..+.-+|+..+++-+|..
T Consensus 75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~ 107 (311)
T 3m2p_A 75 SQGKISEFHDNEILTQNLYDACYENNISNIVYA 107 (311)
T ss_dssp SSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 11 112467899999999999999844443
No 110
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=77.42 E-value=17 Score=28.37 Aligned_cols=118 Identities=8% Similarity=0.008 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--
Q psy2575 35 NPTSDTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds-- 110 (165)
...++.+.+...+++. ...+++|-|.+..+...+..+.+ +.-+|++. .|.+.+...+..+...|.++..++..
T Consensus 48 ~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~-~gd~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (359)
T 1svv_A 48 DSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALR-PWEAVIAT--QLGHISTHETGAIEATGHKVVTAPCPDG 124 (359)
T ss_dssp SHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCC-TTEEEEEE--TTSHHHHSSTTHHHHTTCCEEEECCTTS
T ss_pred cHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhC-CCCEEEEc--ccchHHHHHHHHHhcCCCeeEEEeCCCC
Confidence 3456666666655543 33567777777666666665543 33466665 35554443322355678888888743
Q ss_pred -----hHHHhchh--------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -----AMFGLISR--------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -----av~~~m~~--------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+ ...|++- . ..+.|.+...-=-..++-+|+++++++++
T Consensus 125 ~~d~~~l~~~l~~~~~~~~~~~~~v~~~-~-~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 125 KLRVADIESALHENRSEHMVIPKLVYIS-N-TTEVGTQYTKQELEDISASCKEHGLYLFL 182 (359)
T ss_dssp CCCHHHHHHHHHHSCSTTSCEEEEEEEE-S-SCTTSCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eecHHHHHHHHHHHHhccCCCceEEEEE-c-CCCCceecCHHHHHHHHHHHHHhCCEEEE
Confidence 23333433 2334443 2 23445555432234577888999998876
No 111
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=77.38 E-value=22 Score=28.40 Aligned_cols=118 Identities=10% Similarity=0.075 Sum_probs=66.7
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...+. +....+++|-|.+..+...+....+ +.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 69 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~-~gd~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~ 143 (388)
T 1j32_A 69 EPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIE-PGDEVIIPA--PFWVSYPE--MVKLAEGTPVILPT 143 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC-TTCEEEEES--SCCTHHHH--HHHHTTCEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcC-CCCEEEEcC--CCChhHHH--HHHHcCCEEEEecC
Confidence 356788888776543 3445678887777666666665533 334666653 55555433 34457888887764
Q ss_pred ch----------HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA----------MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa----------v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +...+. +...|++ ...-.+.|.+....=-..++-+|+++++++++
T Consensus 144 ~~~~~~~~d~~~l~~~l~~~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 144 TVETQFKVSPEQIRQAITPKTKLLVF-NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp CGGGTTCCCHHHHHHHCCTTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CcccCCCCCHHHHHHhcCcCceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 31 222232 2223333 22222345554433345677888999998876
No 112
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=77.29 E-value=9.4 Score=31.32 Aligned_cols=70 Identities=17% Similarity=0.120 Sum_probs=41.5
Q ss_pred ecCCHHHHHHHHHHHh--CCc--eE--EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeec
Q psy2575 58 LGYSKIVELFLKNAAQ--HRK--FQ--CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMA 131 (165)
Q Consensus 58 ~g~S~tV~~~L~~A~~--~~~--f~--ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~ 131 (165)
.-|+..+.+.+..+.+ +.+ ++ ||+.-+.|.++...=.+.+++. |+|+|--
T Consensus 161 ~~yd~~L~~~~~~~a~~~gi~~~~~~Gvy~~~~Gp~feT~AE~~~~r~~------------------------Gad~VgM 216 (285)
T 3khs_A 161 SVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAECKILRLM------------------------GSDAVGM 216 (285)
T ss_dssp TCBCHHHHHHHHHHHHHHTCGGGEEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEES
T ss_pred ccCCHHHHHHHHHHHHHcCCCcceeeEEEEEecCCEEeCHHHHHHHHHc------------------------CCcEEec
Confidence 3456666666655554 333 33 6666666776644222333333 5666554
Q ss_pred CCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 132 NGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 132 nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
. |.+.+.+|+++++|+..++
T Consensus 217 e--------~~pea~lAr~~gi~~~~i~ 236 (285)
T 3khs_A 217 S--------TAPETIVAKHGGMRCLAVS 236 (285)
T ss_dssp S--------SHHHHHHHHHTTCEEEEEE
T ss_pred c--------HHHHHHHHHHCCCCEEEEE
Confidence 4 5788888999999988765
No 113
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=77.04 E-value=20 Score=29.22 Aligned_cols=116 Identities=11% Similarity=0.002 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHH-HHH-HhhcCCceEEEccchH-
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-AVS-LAKSKIQTVLIPDSAM- 112 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~l-a~~-L~~~GI~v~~I~dsav- 112 (165)
...+.+.+..++++.-.+.|++-+.+..+...+.... ++.-+|++. .|.+.+... ++. +...|+++..++....
T Consensus 64 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~-~~gd~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 140 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGEAGLATASGISAITTTLLTLC-QQGDHIVSA--SAIYGCTHAFLSHSMPKFGINVRFVDAAKPE 140 (398)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEE--SSSCHHHHHHHHTHHHHTTCEEEEECTTSHH
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEc--CCCcccHHHHHHHHHHHcCCEEEEeCCCCHH
Confidence 3344555555555544466666665544444454443 334466666 455655432 322 3668999988874322
Q ss_pred --HHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 --FGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 --~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+..=.++++-...--+.|.+.. -..++-+|+++++++++
T Consensus 141 ~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 141 EIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVV 184 (398)
T ss_dssp HHHHHCCTTEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 2333321233332222223344442 46788899999998876
No 114
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=76.99 E-value=8.1 Score=31.96 Aligned_cols=114 Identities=9% Similarity=-0.060 Sum_probs=63.5
Q ss_pred HHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChH-HHHHHH-HhhcCCceEEEccc--hH
Q psy2575 37 TSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKG-HELAVS-LAKSKIQTVLIPDS--AM 112 (165)
Q Consensus 37 ~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG-~~la~~-L~~~GI~v~~I~ds--av 112 (165)
..+.+.+..++++...+.++|-|.+..+...+..+. ++.-+|++.+ |.+.+ ...... +...|+++..++.. .+
T Consensus 57 ~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~-~~gd~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 133 (412)
T 2cb1_A 57 TAKALEERLKALEGALEAVVLASGQAATFAALLALL-RPGDEVVAAK--GLFGQTIGLFGQVLSLMGVTVRYVDPEPEAV 133 (412)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEET--TCCHHHHHHHHHTTTTTTCEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 344555555556655567777665555555554333 2344677664 55544 233333 56689999988743 33
Q ss_pred HHhchh-CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 FGLISR-VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 ~~~m~~-v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+.. ...|++ ...-.+.|.+. . -..++-+|+++++++++
T Consensus 134 ~~~i~~~~~~v~~-~~~~n~~G~~~-~--l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 134 REALSAKTRAVFV-ETVANPALLVP-D--LEALATLAEEAGVALVV 175 (412)
T ss_dssp HHHCCTTEEEEEE-ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred HHHhccCCeEEEE-eCCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 333432 333333 22223345444 2 45688889999998876
No 115
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=76.93 E-value=14 Score=30.04 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=61.1
Q ss_pred CCCCEEEEecCCHHHHH-HHHHHHhCCce-EEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEE
Q psy2575 50 HSNEIILTLGYSKIVEL-FLKNAAQHRKF-QCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIII 124 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~-~L~~A~~~~~f-~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~Vll 124 (165)
..+.+||+.|.+..+=. +.....+.... +|+++...+. ....+...+...++.+.... ...+..++.++|.|+-
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL-KQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHH-HHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChh-hHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 34678888887655533 33333222133 7777754432 22344555554454433222 1345667777777775
Q ss_pred ccceeec--------CCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 125 GTHTVMA--------NGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 125 GAd~V~~--------nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
-|-.... .---+|-.||..++-+|+..+++-+|...+
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 5421100 001135679999999999999877766554
No 116
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=76.86 E-value=28 Score=28.13 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=64.1
Q ss_pred HHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHHh---CCceEEEEecCCCCChHH-HHHHHHhhcCCceEEEccc--
Q psy2575 39 DTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAAQ---HRKFQCIVMENSPENKGH-ELAVSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 39 ~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~~---~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~ds-- 110 (165)
+.+.+..++++.- ..+++|-|.+..+...+....+ ++.-+|++. .|.+.+. ..+..+...|.++..++..
T Consensus 71 ~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 148 (423)
T 3lvm_A 71 DIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITS--KTEHKAVLDTCRQLEREGFEVTYLAPQRN 148 (423)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEE--TTSCHHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred HHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEEC--CccchHHHHHHHHHHHcCCEEEEeccCCC
Confidence 3344444444433 3677777777666655554442 345567665 3555554 3355556789998888743
Q ss_pred ------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-..+.+=.++++-...-.+.|.+.. --.|+-+|+++++++++
T Consensus 149 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 149 GIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp SCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred CccCHHHHHHhcCCCcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEE
Confidence 233333332244443322234454444 45588889999998876
No 117
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=76.48 E-value=19 Score=25.89 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=58.1
Q ss_pred cCCCCEEEEecCCH----HHH---HHHHHHH--h-CCceEEEEecCCCCChHHHHHHHHhhcCCceEE----EccchHHH
Q psy2575 49 IHSNEIILTLGYSK----IVE---LFLKNAA--Q-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVL----IPDSAMFG 114 (165)
Q Consensus 49 I~~~~~ILT~g~S~----tV~---~~L~~A~--~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~----I~dsav~~ 114 (165)
+.+..+|+..|+-. -+. +.+.... + ..+++++++-..|...-..+.+.+.+.+ ++++ ++...+..
T Consensus 33 ~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~ 111 (200)
T 2bfw_A 33 MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRE 111 (200)
T ss_dssp CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHH
T ss_pred CCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHH
Confidence 34555777766433 233 3333332 2 3568888876544112334555555666 7777 34457889
Q ss_pred hchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 115 LISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 115 ~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
+|..+|.+++.... .| .|. ..+=|-..++||++.
T Consensus 112 ~~~~ad~~l~ps~~---e~-----~~~--~~~Ea~a~G~PvI~~ 145 (200)
T 2bfw_A 112 LYGSVDFVIIPSYF---EP-----FGL--VALEAMCLGAIPIAS 145 (200)
T ss_dssp HHTTCSEEEECCSC---CS-----SCH--HHHHHHHTTCEEEEE
T ss_pred HHHHCCEEEECCCC---CC-----ccH--HHHHHHHCCCCEEEe
Confidence 99999999986542 22 232 245566789998875
No 118
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=76.35 E-value=13 Score=29.56 Aligned_cols=98 Identities=15% Similarity=0.024 Sum_probs=48.8
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEccce
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd~ 128 (165)
+.+||+.|.+.-+=..|......+.++|+++..++.. .++...... ...+..++.++|.|+--|-.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 4466666665544332222222233566666544432 223222211 12344556667776654422
Q ss_pred eecCCC------eeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 129 VMANGG------LRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 129 V~~nG~------vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
...+.. -+|-.||..+.-+|+..+++-+|...
T Consensus 88 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~S 125 (347)
T 4id9_A 88 MSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFAS 125 (347)
T ss_dssp CCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEC
Confidence 211111 13567899999999999986555543
No 119
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=76.15 E-value=12 Score=30.27 Aligned_cols=68 Identities=13% Similarity=0.001 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehh
Q psy2575 60 YSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVC 139 (165)
Q Consensus 60 ~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~ 139 (165)
|+..+.+.+.++.+.-+--+|+.-+.|.++...-.+.+++. |+|+|--.
T Consensus 160 ~d~~L~~~~~~~a~~~~~Gvy~~~~Gp~feT~aE~~~~~~~------------------------GadaVgMe------- 208 (268)
T 1g2o_A 160 YSPRLRELARQSDPQLAEGVYAGLPGPHYETPAEIRMLQTL------------------------GADLVGMS------- 208 (268)
T ss_dssp SCHHHHHHHHHHCTTCEEEEEEECCCSSCCCHHHHHHHHHH------------------------TCSEEESS-------
T ss_pred cCHHHHHHHHHHHHHhCCCeEEEEeCCEEeCHHHHHHHHHc------------------------CCeEEecC-------
Confidence 56666666665554333447777777777655444444433 55555444
Q ss_pred cHHHHHHHHhhCCCcEEEEe
Q psy2575 140 GTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 140 GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.+.+|+++++||..++
T Consensus 209 -~~~ea~lA~~~gi~~~~i~ 227 (268)
T 1g2o_A 209 -TVHETIAARAAGAEVLGVS 227 (268)
T ss_dssp -SHHHHHHHHHTTCEEEEEE
T ss_pred -HHHHHHHHHHcCCCEEEEE
Confidence 4677888888888887654
No 120
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=75.86 E-value=6 Score=32.22 Aligned_cols=104 Identities=15% Similarity=0.039 Sum_probs=66.7
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
+-|.++.+-....+...+..+.+ +.+.-|++.+.-|..+-.++.+..++.|+ .++-.++++.+-+...+....+...
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi--~vigPNc~Gii~~~~~~~~~~~~~~ 141 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS--RLIGGNCPGIISAEETKIGIMPGHV 141 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEEESSSCEEEETTTEEEESSCGGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEeCCCCeEEcCCCceeEEcccCC
Confidence 56888888888888888888877 54444555666665555577777777776 4565555655555443332222223
Q ss_pred ecCC--CeeehhcHHHHHHH--HhhCCCcEE
Q psy2575 130 MANG--GLRSVCGTHAVALA--AQHYSIPYP 156 (165)
Q Consensus 130 ~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~ 156 (165)
..-| +++++.|+...+++ +.+.++.|-
T Consensus 142 ~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 1oi7_A 142 FKRGRVGIISRSGTLTYEAAAALSQAGLGTT 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3334 68999999887765 566777764
No 121
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=75.75 E-value=29 Score=27.81 Aligned_cols=117 Identities=13% Similarity=0.127 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCc-eEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~-f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...++.+++...++ +....+++|-|.+..+...+....+ +. -+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 79 ~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~-~g~d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~ 153 (398)
T 3ele_A 79 VETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTS-DAYDEFITIA--PYFPEYK--VFVNAAGARLVEVPA 153 (398)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC-STTCEEEEES--SCCTHHH--HHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcC-CCCCEEEEeC--CCchhhH--HHHHHcCCEEEEEec
Confidence 56788888776543 3455677777766666555554433 33 4666654 5555433 344567888888874
Q ss_pred c---------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhh------CCCcEEE
Q psy2575 110 S---------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH------YSIPYPC 157 (165)
Q Consensus 110 s---------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~------~~vPv~V 157 (165)
. .+...+. +...|++- ..-.+.|.+...---..++-+|++ +++++++
T Consensus 154 ~~~~~~~d~~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 154 DTEHFQIDFDALEERINAHTRGVIIN-SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp CTTTSSCCHHHHHHTCCTTEEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCcCCcCCHHHHHHHhCcCCCEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 3 2222232 34445442 333455666665555667777887 8888775
No 122
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.69 E-value=6.8 Score=30.45 Aligned_cols=47 Identities=9% Similarity=-0.048 Sum_probs=28.0
Q ss_pred Hhchh-CCEEEEccceeec---CCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 114 GLISR-VNKIIIGTHTVMA---NGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 114 ~~m~~-v~~VllGAd~V~~---nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.++.. +|.|+--|-.... .---+|-.|+..+.-+|+..+++-+|...
T Consensus 58 ~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~S 108 (286)
T 3gpi_A 58 SIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVS 108 (286)
T ss_dssp TGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEE
T ss_pred HhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEc
Confidence 34444 7777654421100 01124678999999999998887666544
No 123
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=75.68 E-value=4.5 Score=34.41 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=50.7
Q ss_pred ccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccc
Q psy2575 48 HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd 127 (165)
.+.++.+|+..|.+..-..+...|++ ..++|++++..|...+..++. .-+...+....++..+..++|.|+.+.+
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~-lG~~v~v~d~~~~~p~~~~ad----~~~~~~~~d~~~l~~~a~~~D~V~~~~e 105 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQS-MGYRVAVLDPDPASPAGAVAD----RHLRAAYDDEAALAELAGLCEAVSTEFE 105 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCTTCHHHHHSS----EEECCCTTCHHHHHHHHHHCSEEEECCT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCCCcCchhhhCC----EEEECCcCCHHHHHHHHhcCCEEEEccC
Confidence 57899999999999876766666655 567889998888765554432 2111111112345555578899988766
Q ss_pred ee
Q psy2575 128 TV 129 (165)
Q Consensus 128 ~V 129 (165)
.+
T Consensus 106 ~~ 107 (419)
T 4e4t_A 106 NV 107 (419)
T ss_dssp TC
T ss_pred cC
Confidence 55
No 124
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=75.38 E-value=28 Score=27.81 Aligned_cols=118 Identities=9% Similarity=0.079 Sum_probs=66.8
Q ss_pred ChHHHHHHHHHHhcc----cCCCC-EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNE-IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~-~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++...+. +...+ +++|-|.+..+...+.... ++.-+|++.+ |.+.|.. ..+...|.++..++
T Consensus 65 ~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~--~~~~~~~--~~~~~~g~~~~~v~ 139 (389)
T 1gd9_A 65 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL-KDGEEVLIPT--PAFVSYA--PAVILAGGKPVEVP 139 (389)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC-CTTCEEEEEE--SCCTTHH--HHHHHHTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC-CCCCEEEEcC--CCchhHH--HHHHHCCCEEEEec
Confidence 356788888876443 34456 8888888877666665443 2344666664 4454433 33445688877776
Q ss_pred cc----------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DS----------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 ds----------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. .+...+. +...|++ ...-.+.|.+...-=-..++-+|+++++++++
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~~~~~v~~-~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 140 TYEEDEFRLNVDELKKYVTDKTRALII-NSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp CCGGGTTCCCHHHHHHHCCTTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCccCCCCCHHHHHHhcCcCceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 32 1222222 2333333 22222345544433345677889999998876
No 125
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=75.20 E-value=6.1 Score=32.30 Aligned_cols=103 Identities=11% Similarity=0.076 Sum_probs=65.1
Q ss_pred CCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceee
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~ 130 (165)
-|.++.+.....+...+..+.+ +.+.-|++.+.-|..+-.++.+..++.|+ .++-.++++.+-+...+.-..+....
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~~ 149 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGA--TIIGPNCPGAITPGQAKVGIMPGHIF 149 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTC--EEECSSSCEEEETTTEEEESCCGGGC
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCCeeEcccccceeecccCCC
Confidence 5788888888888888888877 54444445566565555677777777776 35655555555554333222222233
Q ss_pred cCC--CeeehhcHHHHHHH--HhhCCCcEE
Q psy2575 131 ANG--GLRSVCGTHAVALA--AQHYSIPYP 156 (165)
Q Consensus 131 ~nG--~vvnk~GT~~lAl~--Ak~~~vPv~ 156 (165)
.-| +++++.|+...+++ +.+.++.|-
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 179 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQS 179 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCee
Confidence 334 68899999876654 455677764
No 126
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=74.76 E-value=2.9 Score=33.91 Aligned_cols=49 Identities=12% Similarity=0.170 Sum_probs=38.3
Q ss_pred eEEEEecCCCCChH-HHHHHHHhhcCCceEEEccchHH---HhchhCCEEEEc
Q psy2575 77 FQCIVMENSPENKG-HELAVSLAKSKIQTVLIPDSAMF---GLISRVNKIIIG 125 (165)
Q Consensus 77 f~ViV~Es~P~~eG-~~la~~L~~~GI~v~~I~dsav~---~~m~~v~~VllG 125 (165)
-+|.++++.+..+| ..+.+.|++.|++|++++...+. .-+.+.|.||+.
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~ 57 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILS 57 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEE
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEc
Confidence 36777776655555 55788999999999999988774 467899999987
No 127
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=74.69 E-value=31 Score=27.58 Aligned_cols=119 Identities=12% Similarity=-0.007 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHhccc----CCC--CEEEEecCCHHHHHHHHHHH-hCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 35 NPTSDTAPSQACEHI----HSN--EIILTLGYSKIVELFLKNAA-QHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I----~~~--~~ILT~g~S~tV~~~L~~A~-~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
...++.+++.....- ... .+++|-|.+..+...+.-.. -++.-+|++. .|.+.+. ...+...|.++..+
T Consensus 73 ~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~--~p~~~~~--~~~~~~~g~~~~~~ 148 (397)
T 3fsl_A 73 NCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVS--DPTWENH--VAIFAGAGFEVSTY 148 (397)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEE--SSCCHHH--HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEe--CCCchhH--HHHHHHcCCceEEE
Confidence 567888887764422 344 56777777666655532221 1333456665 3666554 34455578888777
Q ss_pred cc----------chHHHhch---hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 108 PD----------SAMFGLIS---RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 108 ~d----------sav~~~m~---~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+- ..+...+. .-.++++=...-.+.|.+...---..++-+|+++++++++
T Consensus 149 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 149 PWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEE
Confidence 64 12333343 2234444333334455555555555788889999988876
No 128
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=74.62 E-value=29 Score=28.32 Aligned_cols=92 Identities=15% Similarity=0.078 Sum_probs=55.3
Q ss_pred CCCEEEEecCCH---HHHHHHHHHHh----CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-cchHHHhchhCCEE
Q psy2575 51 SNEIILTLGYSK---IVELFLKNAAQ----HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-DSAMFGLISRVNKI 122 (165)
Q Consensus 51 ~~~~ILT~g~S~---tV~~~L~~A~~----~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-dsav~~~m~~v~~V 122 (165)
+..+|++++.|. .....+..+.+ ..++.|++.-.+.. -..+.+.+.+.++++.+.+ ...+..+|..+|.|
T Consensus 179 ~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlv 256 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AEITAERYRTVAVEADVAPFISDMAAAYAWADLV 256 (365)
T ss_dssp SCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEE
T ss_pred CCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cccccceecccccccccccchhhhhhhhccceEE
Confidence 346788887653 34455555544 34456665433322 2355667778888887765 23478889999987
Q ss_pred EEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 123 IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 123 llGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
+- +.|...++- |-..++|++++
T Consensus 257 I~-------------raG~~Tv~E-~~a~G~P~Ili 278 (365)
T 3s2u_A 257 IC-------------RAGALTVSE-LTAAGLPAFLV 278 (365)
T ss_dssp EE-------------CCCHHHHHH-HHHHTCCEEEC
T ss_pred Ee-------------cCCcchHHH-HHHhCCCeEEe
Confidence 62 335444443 34578898754
No 129
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=74.61 E-value=29 Score=27.27 Aligned_cols=109 Identities=8% Similarity=0.031 Sum_probs=57.0
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhh-cCCceEEEc-----cchHHHhch--hCCEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAK-SKIQTVLIP-----DSAMFGLIS--RVNKI 122 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~-~GI~v~~I~-----dsav~~~m~--~v~~V 122 (165)
.+.+||+.|.+.-+=..|......+..+|+++..++...- ...+.+.+ .+-.+.++. ...+..++. ++|.|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR-EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCT-HHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchH-HHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 4568888887766643333332224578888865544322 23333332 232333332 233455565 45555
Q ss_pred EEccceeecCC--------CeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 123 IIGTHTVMANG--------GLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 123 llGAd~V~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+--|-...... --.|-.|+..+.-+|+..+++-+|...
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~S 128 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSS 128 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 54332110000 012667899999999998876555543
No 130
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=74.52 E-value=8.8 Score=30.99 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHHHh--CCc---eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCC
Q psy2575 59 GYSKIVELFLKNAAQ--HRK---FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANG 133 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~~---f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG 133 (165)
-|+..+.+.+..+.+ +.+ --+|+.-+.|.++...=.+.+++. |+|+|--.
T Consensus 146 ~~d~~L~~~~~~~a~~~gi~~~~~Gvy~~~~Gp~fet~aE~~~~~~~------------------------GadaVgMe- 200 (259)
T 3ozb_A 146 PYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERD------------------------GNDIVGMT- 200 (259)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEESCCEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEESS-
T ss_pred CCCHHHHHHHHHHHHHcCCCeEeeeEEEEEeCCccCCHHHHHHHHHc------------------------CCEEEcCc-
Confidence 356666666665554 322 125566666776654333344333 55555444
Q ss_pred CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 134 GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 134 ~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.+.+|+++++|+.+++
T Consensus 201 -------~~~ea~vA~~~gi~~~~I~ 219 (259)
T 3ozb_A 201 -------GMPEAALARELDLPYACLA 219 (259)
T ss_dssp -------STTHHHHHHHTTCCEEEEE
T ss_pred -------HHHHHHHHHHcCCCeEEEE
Confidence 4567888888888888764
No 131
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=74.51 E-value=17 Score=28.57 Aligned_cols=70 Identities=19% Similarity=0.282 Sum_probs=45.3
Q ss_pred EEEecCCHHHHHHHHHHHhCCceEEE-EecCCCCChHHHHHHHHhhcCCceEEEc----------cchHHHhchh--CCE
Q psy2575 55 ILTLGYSKIVELFLKNAAQHRKFQCI-VMENSPENKGHELAVSLAKSKIQTVLIP----------DSAMFGLISR--VNK 121 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~----------dsav~~~m~~--v~~ 121 (165)
||.-|.++.++.++...+++.+++|. |+-.+|...|.+.|+ +.|||+..++ |..+...+++ +|.
T Consensus 10 vl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~---~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dl 86 (215)
T 3tqr_A 10 VLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQ---QADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKL 86 (215)
T ss_dssp EEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHH---HTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSE
T ss_pred EEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHH---HcCCCEEEeCccccCchhHhHHHHHHHHHhcCCCE
Confidence 44457888888777766555345544 444577777766655 4799999874 2344555544 788
Q ss_pred EEEccc
Q psy2575 122 IIIGTH 127 (165)
Q Consensus 122 VllGAd 127 (165)
+++..-
T Consensus 87 iv~agy 92 (215)
T 3tqr_A 87 IVLAGF 92 (215)
T ss_dssp EEESSC
T ss_pred EEEccc
Confidence 887653
No 132
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=74.44 E-value=28 Score=27.02 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=54.8
Q ss_pred CEEEE-ecCCHHHHHHH----HHHHh-CCceEEEEecCCCCChHH----HHHHHHhhcCCceEEEcc--c-hHHHhc---
Q psy2575 53 EIILT-LGYSKIVELFL----KNAAQ-HRKFQCIVMENSPENKGH----ELAVSLAKSKIQTVLIPD--S-AMFGLI--- 116 (165)
Q Consensus 53 ~~ILT-~g~S~tV~~~L----~~A~~-~~~f~ViV~Es~P~~eG~----~la~~L~~~GI~v~~I~d--s-av~~~m--- 116 (165)
.+||+ +..|..-...| .-|.+ +.+++++-+.. | .+.+ ++++.+...|++++.... . ....++
T Consensus 8 ~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a 85 (290)
T 3mt0_A 8 RSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEK-R-RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQ 85 (290)
T ss_dssp CEEEEECCSSCSCCHHHHHHHHHHHHHCCEEEEEEECS-S-SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHH
T ss_pred ceEEEEeCCCccchHHHHHHHHHHHhcCCeEEEEEeeC-c-HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHH
Confidence 45555 45443333333 33333 56677554432 3 2222 336667778988776432 2 222332
Q ss_pred --hhCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEe
Q psy2575 117 --SRVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 117 --~~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.++|.+++|...- +++-. -.|+..- -+.++.++||+++-
T Consensus 86 ~~~~~dliV~G~~~~---~~~~~~~~gs~~~-~vl~~~~~PVlvv~ 127 (290)
T 3mt0_A 86 QAEGCGLIIKQHFPD---NPLKKAILTPDDW-KLLRFAPCPVLMTK 127 (290)
T ss_dssp HHHTCSEEEEECCCS---CTTSTTSCCHHHH-HHHHHCSSCEEEEC
T ss_pred HhcCCCEEEEecccC---CchhhcccCHHHH-HHHhcCCCCEEEec
Confidence 3489999998752 22222 2455544 44577889999985
No 133
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=74.41 E-value=18 Score=30.07 Aligned_cols=115 Identities=11% Similarity=0.005 Sum_probs=61.4
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHH-H-HHhhcCCceEEE-cc---ch
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELA-V-SLAKSKIQTVLI-PD---SA 111 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la-~-~L~~~GI~v~~I-~d---sa 111 (165)
.+...+..++++...+.|++-+.+..+...+.... ++.-+|++. .|.+.+.... . .+...|+++..+ +. ..
T Consensus 60 ~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~-~~gd~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 136 (421)
T 2ctz_A 60 VDVLEKRLAALEGGKAALATASGHAAQFLALTTLA-QAGDNIVST--PNLYGGTFNQFKVTLKRLGIEVRFTSREERPEE 136 (421)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEC--SCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHh-CCCCEEEEe--CCCchHHHHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 33444444455544455555444444444444433 334466665 4556554332 2 246789999998 53 23
Q ss_pred HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 112 MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
+...+..-.++++ .+.+....+.+.. -..++-+|+++++++++=
T Consensus 137 l~~~i~~~~~~v~-~~~~~n~~G~~~~--l~~i~~~a~~~g~~livD 180 (421)
T 2ctz_A 137 FLALTDEKTRAWW-VESIGNPALNIPD--LEALAQAAREKGVALIVD 180 (421)
T ss_dssp HHHHCCTTEEEEE-EESSCTTTCCCCC--HHHHHHHHHHHTCEEEEE
T ss_pred HHHhhccCCeEEE-EECCCCCCCcccC--HHHHHHHHHHcCCEEEEE
Confidence 4444433234444 2333332334444 467888999999998873
No 134
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=74.18 E-value=14 Score=28.53 Aligned_cols=101 Identities=11% Similarity=0.013 Sum_probs=57.0
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE---ccchHHHhchhCCEEEEccce
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI---PDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I---~dsav~~~m~~v~~VllGAd~ 128 (165)
+.+|++.|-|.-+=..|......+..+|+++.-.+.... ..++..... ...++..++.++|.|+--|-.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 457888887766644444443335577887765553221 112222111 123455566666666644422
Q ss_pred eecCCC-----eeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 129 VMANGG-----LRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 129 V~~nG~-----vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
..... -+|-.|+..+..+|+..+++-+|...+
T Consensus 75 -~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 75 -SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp -CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 11111 257889999999999998866665544
No 135
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=73.96 E-value=38 Score=28.83 Aligned_cols=112 Identities=7% Similarity=-0.096 Sum_probs=60.3
Q ss_pred HHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHH-HHhhcCCceEEEccc---hHH
Q psy2575 39 DTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAV-SLAKSKIQTVLIPDS---AMF 113 (165)
Q Consensus 39 ~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~-~L~~~GI~v~~I~ds---av~ 113 (165)
+...+..++++.-.+.|++-+.+..+...+....+ +.-+|++.+ |.+.+. .+.+ .+...|+++++++.. .+.
T Consensus 117 ~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~-~Gd~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~ 193 (445)
T 1qgn_A 117 VVLEEKISALEGAESTLLMASGMCASTVMLLALVP-AGGHIVTTT--DCYRKTRIFIETILPKMGITATVIDPADVGALE 193 (445)
T ss_dssp HHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSC-SSCEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC-CCCEEEEcC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHH
Confidence 33444444444433555554444444444443333 334677765 666553 2333 467789999999743 344
Q ss_pred HhchhCC--EEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 114 GLISRVN--KIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 114 ~~m~~v~--~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+..=+ .|++ ...--+.|.+. . --.++-+|+++++++++
T Consensus 194 ~ai~~~tv~lV~l-e~p~NptG~v~-d--l~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 194 LALNQKKVNLFFT-ESPTNPFLRCV-D--IELVSKLCHEKGALVCI 235 (445)
T ss_dssp HHHHHSCEEEEEE-ESSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred HHhccCCCCEEEE-eCCCCCCCccc-C--HHHHHHHHHHcCCEEEE
Confidence 4444323 3443 22222334433 3 35788899999999876
No 136
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=73.92 E-value=16 Score=30.64 Aligned_cols=116 Identities=13% Similarity=-0.047 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHH-HH-HHHhhcCCceEEEccc--
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHE-LA-VSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~-la-~~L~~~GI~v~~I~ds-- 110 (165)
....+.+.+..+++....+.+++-|.+..+...|... -++.-+|++.+ |.+.|.. +. ..+...|+++..++..
T Consensus 80 ~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 156 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGAL-LGAGDRLVAAR--SLFGSCFVVCSEILPRWGVQTVFVDGDDL 156 (414)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTT-CCTTCEEEEES--CCCHHHHHHHHTHHHHTTCEEEEECTTCH
T ss_pred ChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHH-hCCCCEEEEcC--CccchHHHHHHHHHHHcCcEEEEeCCCCH
Confidence 3445556655555555445555555444444344333 23445666653 5555532 23 2356689999999743
Q ss_pred -hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++...+. +...|++ ..---+.|.+. . --.++-+|+++++++++
T Consensus 157 ~~l~~ai~~~t~~v~l-e~p~NptG~~~-~--l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 157 SQWERALSVPTQAVFF-ETPSNPMQSLV-D--IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp HHHHHHTSSCCSEEEE-ESSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcCCCCeEEEE-ECCCCCCCccc-c--HHHHHHHHHHcCCEEEE
Confidence 2333343 3445554 22222334432 2 34688899999998886
No 137
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=73.63 E-value=27 Score=28.32 Aligned_cols=119 Identities=13% Similarity=0.065 Sum_probs=65.2
Q ss_pred ChHHHHHHHHHHhcc----------cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCc
Q psy2575 34 ANPTSDTAPSQACEH----------IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----------I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~ 103 (165)
....++.+++.-.++ +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.+
T Consensus 77 ~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~-~~gd~vl~~~--p~y~~~~--~~~~~~g~~ 151 (416)
T 1bw0_A 77 SPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAIC-DAGDYALVPQ--PGFPHYE--TVCKAYGIG 151 (416)
T ss_dssp CHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEE--SCCTHHH--HHHHHTTCE
T ss_pred CHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhC-CCCCEEEEcC--CCcHhHH--HHHHHcCcE
Confidence 456788888766521 345577888777766655555443 3344676664 5555543 334567887
Q ss_pred eEEEccc----------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 TVLIPDS----------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 v~~I~ds----------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++.. .+...+.+-.++++=.+.-.+.|.+...-=-..++-+|+++++++++
T Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 7766521 22223322123332222222335444332245677888999998876
No 138
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=73.57 E-value=26 Score=28.23 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=65.4
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc----
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---- 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---- 109 (165)
....++.+++.-- +....+++|-|.+..+...+.... ++.-+|++. .|.+.+... .+...|.++..++.
T Consensus 76 ~~~l~~~la~~~g--~~~~~v~~~~g~~~al~~~~~~~~-~~gd~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~ 148 (397)
T 2zyj_A 76 YAPLRAFVAEWIG--VRPEEVLITTGSQQALDLVGKVFL-DEGSPVLLE--APSYMGAIQ--AFRLQGPRFLTVPAGEEG 148 (397)
T ss_dssp CHHHHHHHHHHHT--SCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEE--ESCCHHHHH--HHHTTCCEEEEEEEETTE
T ss_pred CHHHHHHHHHHhC--CChhhEEEeccHHHHHHHHHHHhC-CCCCEEEEe--CCCcHHHHH--HHHHcCCEEEecCcCCCC
Confidence 3566777777652 444567777777766665555443 233466664 366666443 34457887776652
Q ss_pred ---chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 ---SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 ---sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+. +...|++-...-.+.|.+...-=-..++-+|+++++++++
T Consensus 149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 12333343 3444433222223445544332233678889999998876
No 139
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=73.57 E-value=23 Score=28.10 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=54.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHH-H-HHHhhcCCceEEEccc----------hHHHhchhC
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-A-VSLAKSKIQTVLIPDS----------AMFGLISRV 119 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~l-a-~~L~~~GI~v~~I~ds----------av~~~m~~v 119 (165)
..+++|-|.+..+...+....-++.-+|++. .|.+.+... . ......|.++..++.. .+-..+.+-
T Consensus 77 ~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 154 (390)
T 1elu_A 77 NTITITDNVTTGCDIVLWGLDWHQGDEILLT--DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPK 154 (390)
T ss_dssp GGEEEESSHHHHHHHHHHHSCCCTTCEEEEE--TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTT
T ss_pred HHEEEeCChHHHHHHHHhCCCCCCCCEEEEe--cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCC
Confidence 3677777766666555554412334567765 466666543 2 2234568888887742 122223221
Q ss_pred CEEEEccceeecCCCeeehhcHHHHHHHHh----hCCCcEEE
Q psy2575 120 NKIIIGTHTVMANGGLRSVCGTHAVALAAQ----HYSIPYPC 157 (165)
Q Consensus 120 ~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak----~~~vPv~V 157 (165)
.++++-...-.+.|.+.. --.++-+|+ ++++++++
T Consensus 155 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 155 TRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp EEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEE
T ss_pred ceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEE
Confidence 233332333334455554 456778888 88888776
No 140
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=73.33 E-value=7.3 Score=28.53 Aligned_cols=38 Identities=3% Similarity=-0.150 Sum_probs=26.4
Q ss_pred ChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEc
Q psy2575 88 NKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIG 125 (165)
Q Consensus 88 ~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllG 125 (165)
.+-.+.++.+++.|+++..|++..-..+-+.+|.++.-
T Consensus 124 ~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~ 161 (188)
T 1tk9_A 124 PNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVV 161 (188)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEe
Confidence 34445677777788888888877666666678877743
No 141
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=73.27 E-value=6.3 Score=30.32 Aligned_cols=80 Identities=10% Similarity=0.074 Sum_probs=47.0
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcE
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPY 155 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv 155 (165)
..+|.+.+....+ -..+++.|.+.|..+.+++...-..-+.++|.+++.--. .|+.........+.-.+...++|+
T Consensus 13 ~~~i~~id~~~~~-~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~---p~~~~~~~~~~~l~~~~~~~~~Pi 88 (212)
T 2a9v_A 13 MLKIYVVDNGGQW-THREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGA---PNIDEELDKLGSVGKYIDDHNYPI 88 (212)
T ss_dssp CCBEEEEEESCCT-TCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEEC---SCGGGTGGGHHHHHHHHHHCCSCE
T ss_pred cceEEEEeCCCcc-HHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCC---CCCCcccccchhHHHHHHhCCCCE
Confidence 3567777755554 345789999999988888754322234457877764320 122222211222333446789999
Q ss_pred EEEe
Q psy2575 156 PCTF 159 (165)
Q Consensus 156 ~V~~ 159 (165)
+-+|
T Consensus 89 LGIC 92 (212)
T 2a9v_A 89 LGIC 92 (212)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9877
No 142
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=73.19 E-value=28 Score=29.19 Aligned_cols=115 Identities=10% Similarity=0.003 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHH-HH-HHHhhcCCceEEEcc---ch
Q psy2575 37 TSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHE-LA-VSLAKSKIQTVLIPD---SA 111 (165)
Q Consensus 37 ~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~-la-~~L~~~GI~v~~I~d---sa 111 (165)
..+...+..++++...+.|++-|.+..+...|.... ++.-+|++.+ |.+.|.. +. +.+...|+++++++. .+
T Consensus 83 ~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~-~~Gd~Vi~~~--~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~ 159 (415)
T 2fq6_A 83 THFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFI-EQGDHVLMTN--TAYEPSQDFCSKILSKLGVTTSWFDPLIGAD 159 (415)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECTTCGGG
T ss_pred hHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeC--CCchHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 344444444455543345554322222222332222 3445777764 5665543 33 346778999999863 23
Q ss_pred HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhh--CCCcEEE
Q psy2575 112 MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH--YSIPYPC 157 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~--~~vPv~V 157 (165)
+...++.-+++++-...--+.|.+. .+ ..++-+|++ +++++++
T Consensus 160 le~ai~~~tklV~~e~~~NptG~v~-dl--~~I~~la~~~~~g~~liv 204 (415)
T 2fq6_A 160 IVKHLQPNTKIVFLESPGSITMEVH-DV--PAIVAAVRSVVPDAIIMI 204 (415)
T ss_dssp GGGGCCTTEEEEEEESSCTTTCCCC-CH--HHHHHHHHHHCTTCEEEE
T ss_pred HHHhhccCCcEEEEECCCCCCCEee-cH--HHHHHHHHhhcCCCEEEE
Confidence 3344433233333222222334433 33 578889999 9999887
No 143
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=73.18 E-value=25 Score=28.98 Aligned_cols=111 Identities=9% Similarity=0.003 Sum_probs=60.1
Q ss_pred HHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHH-H-HHHhhcCCceEEEcc--chHHH
Q psy2575 39 DTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-A-VSLAKSKIQTVLIPD--SAMFG 114 (165)
Q Consensus 39 ~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~l-a-~~L~~~GI~v~~I~d--sav~~ 114 (165)
+...+..++++...+.|++-|.+..+...+. ..+ +.-+|++.+ |.+.|..- . ..+...|+++.+++. ..+..
T Consensus 58 ~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~~-~gd~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~ 133 (393)
T 1n8p_A 58 ENLERAVAALENAQYGLAFSSGSATTATILQ-SLP-QGSHAVSIG--DVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQ 133 (393)
T ss_dssp HHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TSC-SSCEEEEES--SCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEECChHHHHHHHHH-HcC-CCCEEEEeC--CCchHHHHHHHHHHHHcCcEEEEeCCChHHHHH
Confidence 3344444445544455555554544444555 332 334676664 66665322 2 356678999999984 23444
Q ss_pred hchh-CCEEEEccceeecCCCeeehhcHHHHHHHHhhC----CCcEEE
Q psy2575 115 LISR-VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY----SIPYPC 157 (165)
Q Consensus 115 ~m~~-v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~----~vPv~V 157 (165)
.+.. ...|++ ...--+.|.+. . -..++-+|+++ ++++++
T Consensus 134 ~i~~~t~lv~~-~~~~nptG~~~-~--l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 134 LIKENTKLVWI-ETPTNPTLKVT-D--IQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp HSCSSEEEEEE-CSSCTTTCCCC-C--HHHHHHHHHHHTTTTTCEEEE
T ss_pred hcccCceEEEE-ECCCCCcceec-C--HHHHHHHHHHhCCCCCCEEEE
Confidence 4433 333333 22223344444 2 35678888998 888876
No 144
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=73.15 E-value=6.2 Score=29.42 Aligned_cols=36 Identities=11% Similarity=-0.031 Sum_probs=22.3
Q ss_pred HHHHHHHhhcCCceEEEccchHHHhchh---CCEEEEcc
Q psy2575 91 HELAVSLAKSKIQTVLIPDSAMFGLISR---VNKIIIGT 126 (165)
Q Consensus 91 ~~la~~L~~~GI~v~~I~dsav~~~m~~---v~~VllGA 126 (165)
.+.++.+++.|+++..|++..-..+.+. +|.++.-.
T Consensus 130 i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~ 168 (199)
T 1x92_A 130 IQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVP 168 (199)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeC
Confidence 4456666667777777776555555555 77776543
No 145
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=73.09 E-value=18 Score=28.17 Aligned_cols=105 Identities=14% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEccc
Q psy2575 52 NEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd 127 (165)
..+|++.|.+..+=. +.....+....+|+++...|... -+..|...|+.+.... ..++...+..+|.|+.-+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~---~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK---AAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH---HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH---HHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 467888887665533 33333331126777776555432 1345566676654332 1345566777777776542
Q ss_pred eeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 128 TVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 128 ~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
..-....-.+-.++..+.-+|++.+++-+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~ 113 (299)
T 2wm3_A 82 YWESCSQEQEVKQGKLLADLARRLGLHYVVYS 113 (299)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCccccchHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 11110111234578888888888888877763
No 146
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=73.04 E-value=18 Score=29.07 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHhcccC----C-CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEHIH----S-NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~----~-~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...++.+++...++.. + ..+++|-|.+..+...+.... ++.-+|++.+ |.+.+. ...+...|.++..++.
T Consensus 81 ~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~--~~~~~~--~~~~~~~g~~~~~~~~ 155 (407)
T 3nra_A 81 LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV-ARGDKVAIVQ--PDYFAN--RKLVEFFEGEMVPVQL 155 (407)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC-CTTCEEEEEE--SCCTHH--HHHHHHTTCEEEEEEB
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEcC--Ccccch--HHHHHHcCCEEEEeec
Confidence 4567777776655543 2 467777666655555554332 3444666653 555543 3445557877776653
Q ss_pred --------------chHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 --------------SAMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 --------------sav~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+-..+. +...|++ ...-.+.|.+...---..++-+|+++++++++
T Consensus 156 ~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 156 DYVSADETRAGLDLTGLEEAFKAGARVFLF-SNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp CCCSSCCSSCCBCHHHHHHHHHTTCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccccccCcCCCcCHHHHHHHHhhCCcEEEE-cCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 22333333 3444444 22233456665544456788889999998876
No 147
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=72.97 E-value=27 Score=28.48 Aligned_cols=114 Identities=7% Similarity=-0.087 Sum_probs=61.5
Q ss_pred HHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHHHH-hhcCCceEEEccc---h
Q psy2575 37 TSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAVSL-AKSKIQTVLIPDS---A 111 (165)
Q Consensus 37 ~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~~L-~~~GI~v~~I~ds---a 111 (165)
..+.+.+..++++...+.|++-+.+..+...+....+ +.-+|++.+ |.+.+. ...+.+ ...|+++..++.. .
T Consensus 66 ~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~-~gd~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 142 (398)
T 1gc0_A 66 TLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLR-PGDEVLLGN--TLYGCTFAFLHHGIGEFGVKLRHVDMADLQA 142 (398)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCC-TTCEEEEES--SCCSHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhc-CCCEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 3444444445555444566665555454545554433 334666654 455543 334443 6689999988743 2
Q ss_pred HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 112 MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 112 v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+...+. +...|++. ..-.+.|.+. . -..++-+|+++++++++
T Consensus 143 l~~~i~~~~~~v~~~-~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 185 (398)
T 1gc0_A 143 LEAAMTPATRVIYFE-SPANPNMHMA-D--IAGVAKIARKHGATVVV 185 (398)
T ss_dssp HHHHCCTTEEEEEEE-SSCTTTCCCC-C--HHHHHHHHGGGTCEEEE
T ss_pred HHHhcCCCCeEEEEE-CCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 333333 23334432 1222335444 2 45688889999998876
No 148
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=72.83 E-value=13 Score=31.80 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=41.8
Q ss_pred cCCHHHHHHHHHHHh--CC--ceE--EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 59 GYSKIVELFLKNAAQ--HR--KFQ--CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~~--~f~--ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
-|+..+.+.+..+.+ +. .++ +|+.-+.|.++...-.+.++.. |+|+|--.
T Consensus 250 ~yd~~Lr~~a~~aA~~~gi~~~~~~Gvyv~~~GP~FeT~AE~r~lr~~------------------------GadaVgMe 305 (373)
T 2p4s_A 250 TYDPKLNQQAKVIARQIGIENELREGVYTCLGGPNFETVAEVKMLSML------------------------GVDAIGMS 305 (373)
T ss_dssp SBCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCCEEESS
T ss_pred cCCHHHHHHHHHHHHHcCCCcceeeEEEEEeeCCcccCHHHHHHHHHc------------------------CCeEEecC
Confidence 466666666666555 32 233 6777777777655444444444 45555443
Q ss_pred CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.+.+|+++++|+..++
T Consensus 306 --------tapEa~lAre~Gi~~~~I~ 324 (373)
T 2p4s_A 306 --------TVHEIITARHCGMTCFAFS 324 (373)
T ss_dssp --------SHHHHHHHHHTTCEEEEEE
T ss_pred --------hHHHHHHHHHcCCCEEEEE
Confidence 4677788888888877654
No 149
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=72.78 E-value=10 Score=31.09 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=40.9
Q ss_pred cCCHHHHHHHHHHHh--C--CceE--EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 59 GYSKIVELFLKNAAQ--H--RKFQ--CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~--~~f~--ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
-|+..+.+.+.++.+ . .+++ +|+.-+.|.++...-.+.+++. |+|+|--.
T Consensus 167 ~~d~~L~~~~~~~a~~~~~~~~~~~Gvy~~~~Gp~feT~aE~~~~r~~------------------------Gad~VgMe 222 (287)
T 1tcv_A 167 AYDRDLRKLAVQVAEENGFGNLVHQGVYVMNGGPCYETPAECTMLLNM------------------------GCDVVGMS 222 (287)
T ss_dssp SBCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEESS
T ss_pred ccCHHHHHHHHHHHhhhcCCCceeeEEEEEecCCccCCHHHHHHHHHc------------------------CCcEEccc
Confidence 456666666665554 2 2233 6676677777665444555444 44444433
Q ss_pred CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+.+.+.+|+++++|+..++
T Consensus 223 --------~~~ea~vA~~~gi~~~~i~ 241 (287)
T 1tcv_A 223 --------TIPEVVIARHCGIQVFAVS 241 (287)
T ss_dssp --------SHHHHHHHHHTTCEEEEEE
T ss_pred --------HHHHHHHHHHCCCCEEEEE
Confidence 4667777777777777654
No 150
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=72.72 E-value=18 Score=28.32 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=45.7
Q ss_pred EEEEecCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhchh--C
Q psy2575 54 IILTLGYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLISR--V 119 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~~--v 119 (165)
.||.-|.++..+.+|....++. +++|. |+-.+|...|.+.|+ ++|||+..++. ..+...+++ +
T Consensus 11 ~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~---~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~ 87 (209)
T 4ds3_A 11 VIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE---AAGIATQVFKRKDFASKEAHEDAILAALDVLKP 87 (209)
T ss_dssp EEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH---HTTCCEEECCGGGSSSHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH---HcCCCEEEeCccccCCHHHHHHHHHHHHHhcCC
Confidence 4566677777777777665532 45544 334578777765554 47999998763 344455544 8
Q ss_pred CEEEEccc
Q psy2575 120 NKIIIGTH 127 (165)
Q Consensus 120 ~~VllGAd 127 (165)
|.+++..-
T Consensus 88 Dliv~agy 95 (209)
T 4ds3_A 88 DIICLAGY 95 (209)
T ss_dssp SEEEESSC
T ss_pred CEEEEecc
Confidence 88887663
No 151
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=72.68 E-value=22 Score=25.08 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=35.6
Q ss_pred HHHHhhcCCceEE---Eccc----hHHHhch--hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEee
Q psy2575 94 AVSLAKSKIQTVL---IPDS----AMFGLIS--RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 94 a~~L~~~GI~v~~---I~ds----av~~~m~--~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.+.+...|++++. +... .+..+.+ ++|.+++|+..- +++-. -.|+..- -+.++.++||+|+-+
T Consensus 84 ~~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~---~~~~~~~~Gsv~~-~vl~~~~~PVlvv~~ 156 (170)
T 2dum_A 84 AEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK---LSLSHEFLGSTVM-RVLRKTKKPVLIIKE 156 (170)
T ss_dssp HHHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCC---CC--TTCCCHHHH-HHHHHCSSCEEEECC
T ss_pred HHHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCC---CccccceechHHH-HHHHhCCCCEEEEcc
Confidence 3445566887764 2222 2223334 699999999752 22222 2455433 445667899999843
No 152
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=72.60 E-value=20 Score=29.33 Aligned_cols=115 Identities=10% Similarity=-0.006 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHHH-HhhcCCceEEEccc---
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAVS-LAKSKIQTVLIPDS--- 110 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~~-L~~~GI~v~~I~ds--- 110 (165)
...+...+..+++....+.+++-+.+..+...+.... ++.-+|++.+ |.+.|. ...+. +...|+++..++..
T Consensus 59 ~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~-~~gd~vl~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~ 135 (389)
T 3acz_A 59 PTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFL-QKGDHLIAGD--TLYGCTVSLFTHWLPRFGIEVDLIDTSDVE 135 (389)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTC-CTTCEEEEES--SCCHHHHHHHHHHHHHTTCEEEEECTTCHH
T ss_pred hHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeC--CCchHHHHHHHHHHHHcCCEEEEECCCCHH
Confidence 3334444444445544456665554433333333222 2344677664 556553 33333 56789999998743
Q ss_pred hHHHhchh-CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 AMFGLISR-VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 av~~~m~~-v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.. ...|++ ...-.+.|.+. . -..++-+|+++++++++
T Consensus 136 ~l~~~i~~~~~~v~~-~~~~nptG~~~-~--l~~i~~~~~~~~~~liv 179 (389)
T 3acz_A 136 KVKAAWKPNTKMVYL-ESPANPTCKVS-D--IKGIAVVCHERGARLVV 179 (389)
T ss_dssp HHHHTCCTTEEEEEE-ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCCCCeEEEE-ECCCCCCCeec-C--HHHHHHHHHHcCCEEEE
Confidence 23333432 333333 22223344444 3 46788889999998876
No 153
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=72.60 E-value=28 Score=27.77 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhcccCC--C-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---
Q psy2575 36 PTSDTAPSQACEHIHS--N-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--- 109 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~--~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--- 109 (165)
...+.+.+...+++.- . .+++|-|.+..+...+..+.+ +.-+|++.+ |.+.+..+...+...|.++..++.
T Consensus 67 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~-~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~ 143 (393)
T 1vjo_A 67 ALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVE-PGDVVLIGV--AGYFGNRLVDMAGRYGADVRTISKPWG 143 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCC-TTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccC-CCCEEEEEc--CChhHHHHHHHHHHcCCceEEEecCCC
Confidence 3455666665555532 2 466666666555555555533 334666664 666664455556678888877762
Q ss_pred -----chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+. +...|++ ...-.+.|.+.. --.++-+|+++++++++
T Consensus 144 ~~~d~~~l~~~l~~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 194 (393)
T 1vjo_A 144 EVFSLEELRTALETHRPAILAL-VHAETSTGARQP---LEGVGELCREFGTLLLV 194 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEE-ESEETTTTEECC---CTTHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHhhCCceEEEE-eccCCCcceecc---HHHHHHHHHHcCCEEEE
Confidence 22333333 3444444 233344554443 24677888889988876
No 154
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=72.59 E-value=20 Score=25.99 Aligned_cols=62 Identities=11% Similarity=0.203 Sum_probs=38.0
Q ss_pred HHHHHhhcCCceEEEccchHHH----hchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 93 LAVSLAKSKIQTVLIPDSAMFG----LISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav~~----~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
++..|...|+++..+.+..... .+.+=|.+++-+ ..| ...-+..++-.||..+.|++.++..
T Consensus 67 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS----~sG---~t~~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 67 MAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAIS----NSG---ESSEITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp HHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEEC----SSS---CCHHHHHHHHHHHTTTCCEEEEESC
T ss_pred HHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEe----CCC---CCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5556666677777666554322 233445555432 223 2345677888899999999988753
No 155
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=72.48 E-value=4.3 Score=30.42 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=56.1
Q ss_pred HHHHHHhcccCCC-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH----
Q psy2575 40 TAPSQACEHIHSN-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG---- 114 (165)
Q Consensus 40 ~Ia~~a~~~I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~---- 114 (165)
.-.+.+.+.|.+. +.|..+|.+..-. + +..++..|...|+++..+.+.....
T Consensus 32 ~~i~~~~~~i~~a~~~I~i~G~G~S~~--~---------------------A~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 88 (201)
T 3fxa_A 32 EALVKTVEKIAECTGKIVVAGCGTSGV--A---------------------AKKLVHSFNCIERPAVFLTPSDAVHGTLG 88 (201)
T ss_dssp HHHHHHHHHHHHCSSCEEEECCTHHHH--H---------------------HHHHHHHHHHTTCCEEECCHHHHTTTGGG
T ss_pred HHHHHHHHHHHhcCCcEEEEEecHHHH--H---------------------HHHHHHHHHhcCCcEEEeCchHHHhhhhh
Confidence 3344455566655 4788887665411 1 1235666777888888887765432
Q ss_pred hchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 115 LISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 115 ~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.+.+=|.+|+-+ ..|. ..-+..++-.||..+.|++.++.
T Consensus 89 ~~~~~dvvI~iS----~sG~---t~~~~~~~~~ak~~g~~vi~IT~ 127 (201)
T 3fxa_A 89 VLQKEDILILIS----KGGN---TGELLNLIPACKTKGSTLIGVTE 127 (201)
T ss_dssp GCCTTCEEEEEC----SSSC---CHHHHTTHHHHHHHTCEEEEEES
T ss_pred cCCCCCEEEEEe----CCCC---CHHHHHHHHHHHHcCCeEEEEEC
Confidence 234446655432 3342 34466778899999999998875
No 156
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=72.34 E-value=10 Score=26.62 Aligned_cols=63 Identities=16% Similarity=0.162 Sum_probs=36.2
Q ss_pred HHHHhhcCCceEEEc--cc---hHHHhch--hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEee
Q psy2575 94 AVSLAKSKIQTVLIP--DS---AMFGLIS--RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 94 a~~L~~~GI~v~~I~--ds---av~~~m~--~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.+.+...|++++... .. .+..+.+ ++|.+++|+..- |++-. -.|+..- -+.++.++||+++-+
T Consensus 89 ~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~---~~~~~~~~GSv~~-~vl~~~~~pVlvv~~ 159 (162)
T 1mjh_A 89 KKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGK---TNLKEILLGSVTE-NVIKKSNKPVLVVKR 159 (162)
T ss_dssp HHHHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCS---SCCTTCSSCHHHH-HHHHHCCSCEEEECC
T ss_pred HHHHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCC---CCccceEecchHH-HHHHhCCCCEEEEeC
Confidence 344556788766432 22 2222333 699999999753 22211 2465443 445567899999843
No 157
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=72.30 E-value=26 Score=29.70 Aligned_cols=113 Identities=9% Similarity=0.001 Sum_probs=59.9
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHH-HHhhcCCceEEEccc---hH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAV-SLAKSKIQTVLIPDS---AM 112 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~-~L~~~GI~v~~I~ds---av 112 (165)
.+.+.+..+++......|++-+.+..+...|.... ++.-+|++. .|.+.+. .+.. .+...|+++..++.. ++
T Consensus 84 ~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~-~~Gd~Vi~~--~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l 160 (430)
T 3ri6_A 84 VEDLEQRLKNLTGALGVLALGSGMAAISTAILTLA-RAGDSVVTT--DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAV 160 (430)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHC-CTTCEEEEE--TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEc--CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 44444444445443344444433333333444332 344566665 3555443 2233 667789999999743 33
Q ss_pred HHhchhCCEEEEcccee-ecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 FGLISRVNKIIIGTHTV-MANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 ~~~m~~v~~VllGAd~V-~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+..-+++++ .+.. -+.|.+.. --.++-+|+++++++++
T Consensus 161 ~~ai~~~t~~v~-~e~p~NptG~~~d---l~~i~~la~~~g~~liv 202 (430)
T 3ri6_A 161 EHACDETTKLLF-LETISNPQLQVAD---LEALSKVVHAKGIPLVV 202 (430)
T ss_dssp HHHCCTTEEEEE-EESSCTTTCCCCC---HHHHHHHHHTTTCCEEE
T ss_pred HHhhCCCCeEEE-EECCCCCCCeecC---HHHHHHHHHHcCCEEEE
Confidence 344443234444 2222 33444442 34688899999999987
No 158
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=72.16 E-value=27 Score=29.78 Aligned_cols=118 Identities=15% Similarity=0.089 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c
Q psy2575 35 NPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d 109 (165)
...++.+++...+. +...++++|-|.+..+..++.....++.-+|++.+ |.+.+.. ..+...|.++..++ |
T Consensus 137 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~--p~y~~~~--~~~~~~g~~~~~~~~~ 212 (500)
T 3tcm_A 137 HGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI--PQYPLYS--ASIALHGGALVPYYLN 212 (500)
T ss_dssp HHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEE--SCCTHHH--HHHHHTTCEEEEEECB
T ss_pred HHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeC--CCcHhHH--HHHHHcCCEEEEEecc
Confidence 46688888776443 45667888888777666666554323445676664 5554433 34445677766654 1
Q ss_pred ---------chHHHhchh-------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 ---------SAMFGLISR-------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 ---------sav~~~m~~-------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+.+ ...+++- ..=-+.|.++..---..++-+|+++++++++
T Consensus 213 ~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~-~p~NPtG~~~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 213 ESTGWGLETSDVKKQLEDARSRGINVRALVVI-NPGNPTGQVLAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp TTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cccCCCCCHHHHHHHHHHHHhcCCCceEEEEE-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 122233332 2222222 2223346666665566777778988888775
No 159
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=72.14 E-value=19 Score=31.76 Aligned_cols=94 Identities=11% Similarity=0.163 Sum_probs=52.4
Q ss_pred HHHHhcccCCCCEEEEecCC------HHHHHHHHHHHhCCc--eEEEEe-cCCCC-----------------ChHHHHHH
Q psy2575 42 PSQACEHIHSNEIILTLGYS------KIVELFLKNAAQHRK--FQCIVM-ENSPE-----------------NKGHELAV 95 (165)
Q Consensus 42 a~~a~~~I~~~~~ILT~g~S------~tV~~~L~~A~~~~~--f~ViV~-Es~P~-----------------~eG~~la~ 95 (165)
++.|..+|+||++|...|+. ..+.++..++.+ ++ ++++.. ...|. +.|..+.+
T Consensus 18 aeEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~-~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~~~~~~~~r~ 96 (497)
T 2g39_A 18 AAEAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKE-RPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRK 96 (497)
T ss_dssp HHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHH-SCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCCCHHHHH
T ss_pred HHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhc-CCceEEEEecccccccchHHHhcCCceEEEEeeCCCHHHHH
Confidence 34566789999999998653 233444444443 44 444431 11222 23333333
Q ss_pred HHhhcCCceEEEc--cchHHHhch-----hCCEEEEccceeecCCCeeeh
Q psy2575 96 SLAKSKIQTVLIP--DSAMFGLIS-----RVNKIIIGTHTVMANGGLRSV 138 (165)
Q Consensus 96 ~L~~~GI~v~~I~--dsav~~~m~-----~v~~VllGAd~V~~nG~vvnk 138 (165)
.. +.|- +.++| .+.+..++. ++|..++-+...-.+|.+.-.
T Consensus 97 ~i-~~G~-v~fvP~~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 144 (497)
T 2g39_A 97 AI-NAGE-VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPT 144 (497)
T ss_dssp HH-HTTS-SEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECC
T ss_pred HH-HcCC-CeEECCccccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 33 3331 33333 333443332 589999999999999987654
No 160
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=72.12 E-value=18 Score=28.64 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=59.1
Q ss_pred CCCEEEEecCCHHHHH-HHHHHHh-CCceEEEEecCCCCChHHHHHHHHh-hcCCceEEEc---cchHHHhchh--CCEE
Q psy2575 51 SNEIILTLGYSKIVEL-FLKNAAQ-HRKFQCIVMENSPENKGHELAVSLA-KSKIQTVLIP---DSAMFGLISR--VNKI 122 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~-~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~---dsav~~~m~~--v~~V 122 (165)
.+.+||+.|.+.-+=. +.....+ +..++|++.+..+......-...+. ..++.+.... ...+..++.. +|.|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 102 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI 102 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence 4568999988766533 3333333 5668888876554221111111111 1233332211 2345556666 8888
Q ss_pred EEccceeecCC--------CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 123 IIGTHTVMANG--------GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 123 llGAd~V~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+--|-....+. --+|-.||..+.-+|+..+++-+|..
T Consensus 103 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~ 147 (346)
T 4egb_A 103 VNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQV 147 (346)
T ss_dssp EECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEE
T ss_pred EECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 76554322111 13567799999999999999855544
No 161
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.84 E-value=24 Score=25.01 Aligned_cols=94 Identities=12% Similarity=0.158 Sum_probs=53.7
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHh-hcCCceEEEccc---h-HHHh-chhCCEEE
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLA-KSKIQTVLIPDS---A-MFGL-ISRVNKII 123 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~ds---a-v~~~-m~~v~~Vl 123 (165)
..++.|+.+|++..=..+...+.+ ..++|++++..|.. ++.+. +.|+.+.. .|. . +... +..+|.|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~~~-----~~~~~~~~g~~~~~-~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNEYA-----FHRLNSEFSGFTVV-GDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCGGG-----GGGSCTTCCSEEEE-SCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHH-----HHHHHhcCCCcEEE-ecCCCHHHHHHcCcccCCEEE
Confidence 457899999998765555555544 34688888876653 23444 56665433 221 1 1112 56678777
Q ss_pred EccceeecCCCeeehhcHHHHHHHHhh-CCCcEEEEe
Q psy2575 124 IGTHTVMANGGLRSVCGTHAVALAAQH-YSIPYPCTF 159 (165)
Q Consensus 124 lGAd~V~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V~~ 159 (165)
+.... ..-...++.+++. ++.+.++.-
T Consensus 90 ~~~~~---------~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 90 AFTND---------DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp ECSSC---------HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEeCC---------cHHHHHHHHHHHHHCCCCeEEEE
Confidence 76532 2223455666776 665555543
No 162
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=71.79 E-value=4.1 Score=31.49 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=41.8
Q ss_pred HHHHHHhhcCCceEEEccchHH----HhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhh--CCCcEEEEee
Q psy2575 92 ELAVSLAKSKIQTVLIPDSAMF----GLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH--YSIPYPCTFL 160 (165)
Q Consensus 92 ~la~~L~~~GI~v~~I~dsav~----~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~--~~vPv~V~~~ 160 (165)
.++..|...|+++..+.+.... ..+.+=|.||+- ...|. ..-+..++..||+ .+.|++.++.
T Consensus 76 ~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~i----S~SG~---t~~~i~~~~~ak~~~~Ga~vI~IT~ 143 (220)
T 3etn_A 76 NIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLI----SNSGK---TREIVELTQLAHNLNPGLKFIVITG 143 (220)
T ss_dssp HHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEE----CSSSC---CHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEE----cCCCC---CHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 3666777788888888776542 234445655543 23343 3556778899999 9999998874
No 163
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=71.60 E-value=30 Score=27.34 Aligned_cols=112 Identities=12% Similarity=0.143 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc----
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS---- 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds---- 110 (165)
...++.+++..- +....+++|-|.+..+...+....+ +.-+|++.+ |.+.+ ....+...|.++..++..
T Consensus 70 ~~lr~~la~~~~--~~~~~v~~~~g~t~a~~~~~~~~~~-~gd~vl~~~--~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 142 (363)
T 3ffh_A 70 SSLRKEVADFYQ--LEEEELIFTAGVDELIELLTRVLLD-TTTNTVMAT--PTFVQ--YRQNALIEGAEVREIPLLQDGE 142 (363)
T ss_dssp HHHHHHHHHHHT--CCGGGEEEESSHHHHHHHHHHHHCS-TTCEEEEEE--SSCHH--HHHHHHHHTCEEEEEECCTTSC
T ss_pred HHHHHHHHHHhC--CChhhEEEeCCHHHHHHHHHHHHcc-CCCEEEEcC--CChHH--HHHHHHHcCCEEEEecCCCCCC
Confidence 455666665442 2345677776666555555554433 334677664 55555 334455678888887643
Q ss_pred ----hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhC--CCcEEE
Q psy2575 111 ----AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY--SIPYPC 157 (165)
Q Consensus 111 ----av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V 157 (165)
.+...+. +...|++ ...-.+.|.+...- .+.-+++.+ ++++++
T Consensus 143 ~d~~~l~~~i~~~~~~v~~-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 192 (363)
T 3ffh_A 143 HDLEGMLNAIDEKTTIVWI-CNPNNPTGNYIELA---DIQAFLDRVPSDVLVVL 192 (363)
T ss_dssp CCHHHHHHHCCTTEEEEEE-ESSCTTTCCCCCHH---HHHHHHTTSCTTSEEEE
T ss_pred cCHHHHHHhcccCCCEEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCcEEEE
Confidence 2333332 3444444 33333445444333 355555555 777665
No 164
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=71.53 E-value=41 Score=27.65 Aligned_cols=122 Identities=13% Similarity=0.154 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh-------CCceEEEEecCCCCChHHHH-HHHHhh-----
Q psy2575 33 FANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ-------HRKFQCIVMENSPENKGHEL-AVSLAK----- 99 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-------~~~f~ViV~Es~P~~eG~~l-a~~L~~----- 99 (165)
+.....+.+++..+++.....+++|-|.+..++..++.+.+ ..+-+|++.+ |.+.|... +..+..
T Consensus 96 ~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~--~~yh~~~~~~~~~~g~~~~~ 173 (420)
T 2pb2_A 96 FTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFH--NAFHGRSLFTVSVGGQPKYS 173 (420)
T ss_dssp SCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEET--TCCCCSSHHHHHHSSCHHHH
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEe--CCcCCcCHHHHHhcCCcccc
Confidence 34455666776666666655677777777777766665543 1224677775 43433221 222211
Q ss_pred cCC-----ceEEEc--c-chHHHhchhCCEEEEccceeecCCCe--eehhcHHHHHHHHhhCCCcEEE
Q psy2575 100 SKI-----QTVLIP--D-SAMFGLISRVNKIIIGTHTVMANGGL--RSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 100 ~GI-----~v~~I~--d-sav~~~m~~v~~VllGAd~V~~nG~v--vnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+. ++..++ | ..+-..+.+-.++++ .+.+...|++ ...-=-..++-+|+++++++++
T Consensus 174 ~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi-~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 174 DGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVV-VEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp TTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCCCCeEEecCCCHHHHHHHhccCceEEE-EeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 111 255554 2 233334432223333 2445555664 2233335677889999998876
No 165
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=71.40 E-value=19 Score=27.06 Aligned_cols=41 Identities=10% Similarity=0.218 Sum_probs=18.8
Q ss_pred EecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHHHHH
Q psy2575 57 TLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELAVSL 97 (165)
Q Consensus 57 T~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la~~L 97 (165)
||.....+.+.|.+..+ ...++|+|++.....+-.+.++.+
T Consensus 9 ~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~ 51 (255)
T 1qg8_A 9 SYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPF 51 (255)
T ss_dssp ESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGG
T ss_pred cCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHH
Confidence 34444455555554443 234555555544333333344443
No 166
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=71.36 E-value=34 Score=27.44 Aligned_cols=114 Identities=10% Similarity=-0.041 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---chH
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---SAM 112 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---sav 112 (165)
..++.+.+...++....++++|-|.+..+...+... -++.-+|++. .|.+.+.. ..++..|.++..++. ..+
T Consensus 88 ~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~--~p~~~~~~--~~~~~~g~~~~~v~~~d~~~l 162 (398)
T 3a2b_A 88 DIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCL-MGRNDYILLD--ERDHASII--DGSRLSFSKVIKYGHNNMEDL 162 (398)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHS-SCTTCEEEEE--TTCCHHHH--HHHHHSSSEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-hCCCCEEEEC--CccCHHHH--HHHHHcCCceEEeCCCCHHHH
Confidence 456666666666665556777766665555444433 2344456655 35554433 334557888877763 233
Q ss_pred HHhchh----CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 FGLISR----VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 ~~~m~~----v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+.+ -.++++=...-.+.|.+.. -..++-+|+++++++++
T Consensus 163 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 163 RAKLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEFDAAVMV 208 (398)
T ss_dssp HHHHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 334433 1233332222233454443 46788889999988876
No 167
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=71.36 E-value=10 Score=29.14 Aligned_cols=11 Identities=9% Similarity=0.178 Sum_probs=6.1
Q ss_pred CCceEEEEecC
Q psy2575 74 HRKFQCIVMEN 84 (165)
Q Consensus 74 ~~~f~ViV~Es 84 (165)
+-..+|+++++
T Consensus 28 g~~V~vv~T~~ 38 (189)
T 2ejb_A 28 DFSVDLVISRN 38 (189)
T ss_dssp TCEEEEEECHH
T ss_pred CCEEEEEEChh
Confidence 44556666554
No 168
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=71.27 E-value=18 Score=28.93 Aligned_cols=109 Identities=15% Similarity=0.071 Sum_probs=57.4
Q ss_pred HHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc---------
Q psy2575 40 TAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--------- 110 (165)
Q Consensus 40 ~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--------- 110 (165)
...+..++++.....++|-|.+..+...+..+.-++.-+|++.+ |.+.+. ...+...|.++..++..
T Consensus 40 ~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~ 115 (373)
T 3frk_A 40 KFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS--NTFIAT--ALAVSYTGAKPIFVEPDIRTYNIDPS 115 (373)
T ss_dssp HHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET--TSCTHH--HHHHHHHSCEEEEECEETTTTEECGG
T ss_pred HHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC--CCcHHH--HHHHHHcCCEEEEEeccccccCcCHH
Confidence 33333344555456777766655555555543123444676653 455443 33355678888777633
Q ss_pred hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 111 AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 111 av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+...+.+-.++++ ..-..|.+. . --.++-+|+++++++++=
T Consensus 116 ~l~~~l~~~~~~v~---~~n~~G~~~-~--l~~i~~l~~~~~~~li~D 157 (373)
T 3frk_A 116 LIESAITEKTKAII---AVHLYGQPA-D--MDEIKRIAKKYNLKLIED 157 (373)
T ss_dssp GTGGGCCTTEEEEE---EECCTTCCC-C--HHHHHHHHHHHTCEEEEE
T ss_pred HHHHhcCCCCeEEE---EECCCcCcc-c--HHHHHHHHHHcCCEEEEE
Confidence 22223322223444 222344322 2 346888899999998873
No 169
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=71.18 E-value=27 Score=29.04 Aligned_cols=117 Identities=11% Similarity=0.033 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHhccc----CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc
Q psy2575 35 NPTSDTAPSQACEHI----HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I----~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds 110 (165)
...++.+++.-.++. ...++++|-|.+..+...+....+ +.-+|++.+ |.+.+... .+...|.++..++..
T Consensus 98 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~-~gd~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~ 172 (447)
T 3b46_A 98 PSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN-AGDEVIVFE--PFFDQYIP--NIELCGGKVVYVPIN 172 (447)
T ss_dssp HHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHHH--HHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC-CCCEEEEeC--CCchhHHH--HHHHcCCEEEEEeCC
Confidence 567888888765543 234677777777666666665533 344677765 66655433 344567776666521
Q ss_pred --------------------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 --------------------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 --------------------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+. +...|++- ..-.+.|.+..+-=-..++-+|+++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 239 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN-TPHNPIGKVFTREELTTLGNICVKHNVVIIS 239 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CccccccccccccCcccCHHHHHHhhccCCeEEEEe-CCCCCCCcccCHHHHHHHHHHHHHcCcEEEE
Confidence 1222222 23333332 2222345555443345677889999998876
No 170
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=71.18 E-value=35 Score=26.71 Aligned_cols=55 Identities=9% Similarity=0.048 Sum_probs=32.8
Q ss_pred CCceEEEcc--c---hHHHhchhCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEe
Q psy2575 101 KIQTVLIPD--S---AMFGLISRVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 101 GI~v~~I~d--s---av~~~m~~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
|++++.... . .+.....++|.+++|...- +++-. -.|+..- -+.++.++||+++-
T Consensus 100 ~~~~~~~~~~g~~~~~I~~~a~~~DliV~G~~g~---~~~~~~~~Gs~~~-~vl~~~~~PVlvv~ 160 (309)
T 3cis_A 100 PPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGS---GRWPGRLLGSVSS-GLLRHAHCPVVIIH 160 (309)
T ss_dssp CSCEEEEEESSCHHHHHHHHGGGEEEEEEESSCT---TCCTTCCSCHHHH-HHHHHCSSCEEEEC
T ss_pred CceEEEEEecCCHHHHHHHHhcCCCEEEECCCCC---ccccccccCcHHH-HHHHhCCCCEEEEc
Confidence 887765331 1 2233345799999998752 22211 2465443 44566699999984
No 171
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=71.07 E-value=17 Score=27.29 Aligned_cols=73 Identities=8% Similarity=0.122 Sum_probs=43.1
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeeh-------hcHHHHHHHHh
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSV-------CGTHAVALAAQ 149 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk-------~GT~~lAl~Ak 149 (165)
.+|.|++. +...=..+.+.|++.|+++.++++.. -+.++|.++++- |+-... .+...+..-+.
T Consensus 3 ~~I~iid~-~~~~~~~~~~~l~~~G~~~~~~~~~~---~l~~~d~lil~G------~g~~~~~~~~l~~~~~~~~i~~~~ 72 (200)
T 1ka9_H 3 MKALLIDY-GSGNLRSAAKALEAAGFSVAVAQDPK---AHEEADLLVLPG------QGHFGQVMRAFQESGFVERVRRHL 72 (200)
T ss_dssp CEEEEECS-SCSCHHHHHHHHHHTTCEEEEESSTT---SCSSCSEEEECC------CSCHHHHHHTTSSSCTHHHHHHHH
T ss_pred cEEEEEeC-CCccHHHHHHHHHHCCCeEEEecChH---HcccCCEEEECC------CCcHHHHHHHHHhcCHHHHHHHHH
Confidence 35666653 22222456899999999999988642 345677766642 121111 23334444444
Q ss_pred hCCCcEEEEe
Q psy2575 150 HYSIPYPCTF 159 (165)
Q Consensus 150 ~~~vPv~V~~ 159 (165)
..++|++-+|
T Consensus 73 ~~~~PilGIC 82 (200)
T 1ka9_H 73 ERGLPFLGIC 82 (200)
T ss_dssp HTTCCEEECT
T ss_pred HcCCeEEEEc
Confidence 6789999876
No 172
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=71.06 E-value=8.5 Score=31.20 Aligned_cols=104 Identities=15% Similarity=0.109 Sum_probs=64.2
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcccee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V 129 (165)
+-|.++.+.....+...+..+.+ +.+.-|++.+..|..+-+++.+..++.|+. ++-.+.++.+-+...+.-.-+..+
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~--liGPNc~Gi~~p~~~~~~~~~~~~ 141 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR--MIGPNTPGVITPGECKIGIQPGHI 141 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSCCEEEETTTEEEESSCTTS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEecCCcceecCCcceeEecccCC
Confidence 56888888888888888888877 555445556666665666777777788874 455555554444422221111122
Q ss_pred ecCC--CeeehhcHHHHHHH--HhhCCCcEE
Q psy2575 130 MANG--GLRSVCGTHAVALA--AQHYSIPYP 156 (165)
Q Consensus 130 ~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~ 156 (165)
...| +++...|+...+++ +.+.++.+-
T Consensus 142 ~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 2nu8_A 142 HKPGKVGIVSRSGTLTYEAVKQTTDYGFGQS 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCEE
Confidence 3334 57888899665544 556667664
No 173
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=70.86 E-value=26 Score=26.77 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=54.4
Q ss_pred EEEecCCHHHHHHHHHHHhCC--ceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEcccee
Q psy2575 55 ILTLGYSKIVELFLKNAAQHR--KFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~--~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd~V 129 (165)
|++.|.+..+=..|......+ .++|+++..+|... ..|...++.+.... ..++..+++.+|.|+--|-..
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 76 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-----QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSE 76 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-----HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC---
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-----hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 667777666544333333223 67888776555431 22334555443322 145666778788877554321
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
.+ .|-.|+..+.-+|+..+++-+|...+
T Consensus 77 -~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 77 -VG---QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ---------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -ch---HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 11 35678999999999888876665543
No 174
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=70.71 E-value=38 Score=29.54 Aligned_cols=113 Identities=15% Similarity=0.166 Sum_probs=68.0
Q ss_pred cCCCCEEEEecCCHHHHHHHHHHHhCCce-EEEEecCCC-CC-hHHHHHHHHhhcCCceEEEc-c----chHHHhchh--
Q psy2575 49 IHSNEIILTLGYSKIVELFLKNAAQHRKF-QCIVMENSP-EN-KGHELAVSLAKSKIQTVLIP-D----SAMFGLISR-- 118 (165)
Q Consensus 49 I~~~~~ILT~g~S~tV~~~L~~A~~~~~f-~ViV~Es~P-~~-eG~~la~~L~~~GI~v~~I~-d----sav~~~m~~-- 118 (165)
++.+.++|+.|.+.-+=..+.+....+.. +|+++.-++ .. .-.++..+|.+.|.+++++. | .++..++.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 56778888888887664433322222334 455553332 22 23567888888898887753 3 345556655
Q ss_pred CCEEEEccceeecCCCe-------------eehhcHHHHHHHHhhC-CCcEEEEeecc
Q psy2575 119 VNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQHY-SIPYPCTFLLN 162 (165)
Q Consensus 119 v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~~-~vPv~V~~~~~ 162 (165)
+|.||-.|- +..++.+ .|-.|+..+..+++.. +...+|+..+.
T Consensus 336 ld~VVh~AG-v~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~ 392 (511)
T 2z5l_A 336 PNAVFHTAG-ILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSV 392 (511)
T ss_dssp CSEEEECCC-CCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEG
T ss_pred CcEEEECCc-ccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCH
Confidence 777776552 3333322 2567888888877776 67777776554
No 175
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=70.62 E-value=34 Score=27.87 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=66.5
Q ss_pred ChHHHHHHHHHHhcc----cCCC-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH----IHSN-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++...++ +... .+++|-|.+..+...+....+ +.-+|++.+ |.+.|... .+...|.++..++
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~-~gd~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~ 153 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVD-EGDEVIIIE--PFFDCYEP--MVKAAGGIPRFIP 153 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHHH--HHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcC-CCCEEEEcC--CCchhHHH--HHHHcCCEEEEEe
Confidence 356678888775433 3345 677777777666666665433 334677664 55555433 3445788777765
Q ss_pred cc------------------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DS------------------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 ds------------------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. .+...+. +...|++- ..-.+.|.+..+-=-..++-+|+++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 154 LKPNKTGGTISSADWVLDNNELEALFNEKTKMIIIN-TPHNPLGKVMDRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp CBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcccccccccccCcccCHHHHHHHhccCceEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 32 1222232 23344442 2223345554433345677888999998876
No 176
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=70.55 E-value=29 Score=28.38 Aligned_cols=117 Identities=8% Similarity=-0.035 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHH--HHHHHHHhC-C----------ceEEEEecCCCCChHHHHHHHHhhcC
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVE--LFLKNAAQH-R----------KFQCIVMENSPENKGHELAVSLAKSK 101 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~--~~L~~A~~~-~----------~f~ViV~Es~P~~eG~~la~~L~~~G 101 (165)
...++.|+++. -+....+++|-|.+..+. ..+....++ . .-+|++.+ |.+.+. ...+...|
T Consensus 81 ~~lr~~ia~~~--~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~--p~y~~~--~~~~~~~g 154 (427)
T 3ppl_A 81 VDIRQIWADLL--GVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV--PGYDRH--FSITERFG 154 (427)
T ss_dssp HHHHHHHHHHH--TSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE--SCCHHH--HHHHHHTT
T ss_pred HHHHHHHHHHh--CCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC--CCcHHH--HHHHHHcC
Confidence 56688888765 244567888888776663 333322221 2 45677654 666553 34455678
Q ss_pred CceEEEcc-------chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHH-hhCCCcEEE
Q psy2575 102 IQTVLIPD-------SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAA-QHYSIPYPC 157 (165)
Q Consensus 102 I~v~~I~d-------sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A-k~~~vPv~V 157 (165)
.++..++. ..+...+. +...|++-...=.+.|.+....--..++-+| +++++++++
T Consensus 155 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 155 FEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp CEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred CEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 87777652 22333342 2333332222223445555444444677777 889887765
No 177
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=70.50 E-value=7.3 Score=27.64 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-cchH-HHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHh
Q psy2575 74 HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-DSAM-FGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ 149 (165)
Q Consensus 74 ~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-dsav-~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak 149 (165)
.++.+|.|+|..|... ..+...|.+.|..|.... +..- -..+. +.|.|++ |.-+++.+ | +.++..-+
T Consensus 6 ~r~~rILiVdD~~~~~-~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~~-----G-~el~~~lr 76 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIA-MLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGEP-----S-YPVADILA 76 (123)
T ss_dssp CCCCCEEEESSSTTTS-HHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSCC-----S-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCCC-----H-HHHHHHHH
Confidence 4678999999888642 346778888999876433 3221 12232 3788877 44455432 3 34555557
Q ss_pred hCCCcEEEEee
Q psy2575 150 HYSIPYPCTFL 160 (165)
Q Consensus 150 ~~~vPv~V~~~ 160 (165)
+.++||++++.
T Consensus 77 ~~~ipvI~lTa 87 (123)
T 2lpm_A 77 ERNVPFIFATG 87 (123)
T ss_dssp HTCCSSCCBCT
T ss_pred cCCCCEEEEec
Confidence 78999988754
No 178
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=70.45 E-value=13 Score=25.75 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCceEEEEec-CCCCC--hHHHHHHHHhhcCCceEEEcc
Q psy2575 63 IVELFLKNAAQHRKFQCIVME-NSPEN--KGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 63 tV~~~L~~A~~~~~f~ViV~E-s~P~~--eG~~la~~L~~~GI~v~~I~d 109 (165)
.+..++..+.++++ -+++.| ..|.. -|..+++.+.+.|++++.+|-
T Consensus 68 ~~~~i~~~~~~G~~-V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viPG 116 (117)
T 3hh1_A 68 AVRQVIELLEEGSD-VALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPG 116 (117)
T ss_dssp HHHHHHHHHHTTCC-EEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC-
T ss_pred HHHHHHHHHHCCCe-EEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeCC
Confidence 34555666655555 345555 88864 567889999999999999873
No 179
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=70.40 E-value=8.4 Score=29.28 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=43.1
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeee----hhcHHHHHHHHhh
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRS----VCGTHAVALAAQH 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvn----k~GT~~lAl~Ak~ 150 (165)
++.+|.|++- |..- ....+.|++.|+++.++.+.. -+.++|.++++-- .+ .... ..+...+..-+.+
T Consensus 19 ~~~~I~ii~~-~~~~-~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~GG--~~--~~~~~~~~~~~~~~~i~~~~~ 89 (208)
T 2iss_D 19 SHMKIGVLGV-QGDV-REHVEALHKLGVETLIVKLPE---QLDMVDGLILPGG--ES--TTMIRILKEMDMDEKLVERIN 89 (208)
T ss_dssp -CCEEEEECS-SSCH-HHHHHHHHHTTCEEEEECSGG---GGGGCSEEEECSS--CH--HHHHHHHHHTTCHHHHHHHHH
T ss_pred CCcEEEEEEC-CCch-HHHHHHHHHCCCEEEEeCChH---HHhhCCEEEECCC--cH--HHHHhhhhhhhHHHHHHHHHH
Confidence 5567888864 4322 335788888999999887643 2567777776521 00 0110 1112222233335
Q ss_pred CCCcEEEEe
Q psy2575 151 YSIPYPCTF 159 (165)
Q Consensus 151 ~~vPv~V~~ 159 (165)
.++|++-+|
T Consensus 90 ~g~PilGIC 98 (208)
T 2iss_D 90 NGLPVFATC 98 (208)
T ss_dssp TTCCEEEET
T ss_pred CCCeEEEEC
Confidence 789999877
No 180
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=70.39 E-value=16 Score=31.08 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=62.0
Q ss_pred HHHHHHHhcccCC----CCE--EEEecCCHHHHHHHHHHHh-C------CceEEEEecCCCCChHHHHHHHHhhcCCceE
Q psy2575 39 DTAPSQACEHIHS----NEI--ILTLGYSKIVELFLKNAAQ-H------RKFQCIVMENSPENKGHELAVSLAKSKIQTV 105 (165)
Q Consensus 39 ~~Ia~~a~~~I~~----~~~--ILT~g~S~tV~~~L~~A~~-~------~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~ 105 (165)
+.+.+..++++.- ..+ ++|-|.+..+...+..+.+ + .+-+|++.+ |.+.+ +.+.+...|+++.
T Consensus 142 ~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~--~~~~~--~~~~~~~~G~~v~ 217 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPV--SAHAA--FDKAAQYFGIKLV 217 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEET--TSCTH--HHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC--ccchH--HHHHHHHcCCeeE
Confidence 3444444555532 244 7777766666666655543 2 114676653 44444 3344445688888
Q ss_pred EEccc--------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 106 LIPDS--------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 106 ~I~ds--------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.++.. ++-..+.+-.++++....-.+.|.+.. --.|+-+|+++++++++=
T Consensus 218 ~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 218 RTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp EECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred EeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEe
Confidence 88732 333344332344444333333454433 367888999999998873
No 181
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=70.29 E-value=41 Score=27.09 Aligned_cols=113 Identities=9% Similarity=-0.013 Sum_probs=60.0
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHHH-HhhcCCceEEEccc---hH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAVS-LAKSKIQTVLIPDS---AM 112 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~~-L~~~GI~v~~I~ds---av 112 (165)
.+...+..++++...+.|++-+.+..+...+..+. ++.-+|++.+ |.+.+. ...+. ....|+++..++.. .+
T Consensus 54 ~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~-~~g~~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l 130 (386)
T 1cs1_A 54 RDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPH--DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQAL 130 (386)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEET--TCCHHHHHHHHHHHTTTSCEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEec--CCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHH
Confidence 33444444445544455555433444444444333 3445677664 666652 22323 35679999888742 23
Q ss_pred HHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 FGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 ~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+. +...|++. ..-.+.|.+. . -..++-+|+++++++++
T Consensus 131 ~~~i~~~~~~v~~~-~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 131 RAALAEKPKLVLVE-SPSNPLLRVV-D--IAKICHLAREVGAVSVV 172 (386)
T ss_dssp HHHHHTCCSEEEEE-CSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred HHhhccCCcEEEEe-CCCCCCCccc-C--HHHHHHHHHHcCCEEEE
Confidence 33333 35555543 2222334444 3 35788889999998876
No 182
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=70.11 E-value=40 Score=26.94 Aligned_cols=118 Identities=6% Similarity=0.061 Sum_probs=65.2
Q ss_pred ChH-HHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANP-TSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~-~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
... .++.+++.-.++ +....+++|-|.+..+...+... .++.-+|++. .|.+.|... .+...|.++..++
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l-~~~gd~vl~~--~p~y~~~~~--~~~~~g~~~~~v~ 139 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW-SETGEGVVIH--TPAYDAFYK--AIEGNQRTVMPVA 139 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS-SCTTCEEEEE--ESCCHHHHH--HHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHh-cCCCCEEEEc--CCCcHHHHH--HHHHCCCEEEEee
Confidence 345 788888765443 33456777777665655555543 2334466665 366666443 3345677776665
Q ss_pred cc-----------hHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DS-----------AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 ds-----------av~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. .+...+. +...|++ ...-.+.|.+...-=-..++-+|+++++++++
T Consensus 140 ~~~~~~~~~~d~~~l~~~l~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 140 LEKQADGWFCDMGKLEAVLAKPECKIMLL-CSPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp CEECSSSEECCHHHHHHHHTSTTEEEEEE-ESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCccccCHHHHHHHhccCCCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 21 2223332 3334444 22223345444332234677889999998876
No 183
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=69.95 E-value=6.7 Score=28.82 Aligned_cols=39 Identities=8% Similarity=-0.136 Sum_probs=29.0
Q ss_pred ChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 88 NKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 88 ~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
.+-.+.++.+++.|.++..|++..-..+-+.+|.++.-.
T Consensus 93 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 131 (186)
T 1m3s_A 93 KSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMP 131 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEeC
Confidence 344566888888999999999876666667788877543
No 184
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=69.80 E-value=31 Score=27.18 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=52.5
Q ss_pred CEEEEecCCHHHHHHH-HHHHhCCceEEEEecCCCCC-----hHHHHHHHHhh---cCCceEEEc--c-chHHHhchhCC
Q psy2575 53 EIILTLGYSKIVELFL-KNAAQHRKFQCIVMENSPEN-----KGHELAVSLAK---SKIQTVLIP--D-SAMFGLISRVN 120 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L-~~A~~~~~f~ViV~Es~P~~-----eG~~la~~L~~---~GI~v~~I~--d-sav~~~m~~v~ 120 (165)
.+||+.|.+.-+=..| ....+ +..+|+++...+.. +.....+.|.+ .++...... | .++..++.+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 5788888766553333 33333 34677776533221 01122333332 334332221 1 2344555521
Q ss_pred EEEEccceeecCCCe---------------eehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 121 KIIIGTHTVMANGGL---------------RSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 121 ~VllGAd~V~~nG~v---------------vnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+.|.|+.+.+. +|-.|+..+.-+|+..+++-+|...+
T Consensus 81 ----~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 81 ----SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp ----CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 34444444333 25678999999999988876655443
No 185
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=69.75 E-value=13 Score=31.36 Aligned_cols=123 Identities=12% Similarity=0.078 Sum_probs=66.6
Q ss_pred CChHHHHHHHHHHhcccC---CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHH-HHHHhhc------C
Q psy2575 33 FANPTSDTAPSQACEHIH---SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHEL-AVSLAKS------K 101 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~---~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~l-a~~L~~~------G 101 (165)
+.......+++...++.. ...+++|-|.|..++..|+.+.. ..+-+|++.+ |.+.|..+ +..+... +
T Consensus 104 ~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~ 181 (453)
T 4ffc_A 104 TPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFD--NAYHGRTNLTMALTAKSMPYKSQ 181 (453)
T ss_dssp SCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEET--TCCCCSSHHHHHHCCCCTTTTTT
T ss_pred CCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEc--CccCCcchHHHhhcCCCcccccC
Confidence 344455666666666664 23577777888888888876664 2234566554 34444433 3333211 1
Q ss_pred C-----ceEEEccc--------------------hHHHhchhCCEEEEccceeecCCCeeeh-hc-HHHHHHHHhhCCCc
Q psy2575 102 I-----QTVLIPDS--------------------AMFGLISRVNKIIIGTHTVMANGGLRSV-CG-THAVALAAQHYSIP 154 (165)
Q Consensus 102 I-----~v~~I~ds--------------------av~~~m~~v~~VllGAd~V~~nG~vvnk-~G-T~~lAl~Ak~~~vP 154 (165)
. .+..++.. .+...+..-+..++=.+-+.++|+++.. .+ -..++-+|++|+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~l 261 (453)
T 4ffc_A 182 FGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVV 261 (453)
T ss_dssp SCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCE
T ss_pred CCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1 34444321 1112222223444444567888776643 33 33478889999998
Q ss_pred EEE
Q psy2575 155 YPC 157 (165)
Q Consensus 155 v~V 157 (165)
+++
T Consensus 262 lI~ 264 (453)
T 4ffc_A 262 FIA 264 (453)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 186
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=69.72 E-value=5.7 Score=30.00 Aligned_cols=39 Identities=5% Similarity=0.004 Sum_probs=29.7
Q ss_pred ChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 88 NKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 88 ~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
.+-.++++.+++.|+++..|++..-..+-+.+|.+|.-.
T Consensus 103 ~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~ 141 (200)
T 1vim_A 103 TSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVK 141 (200)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEEC
Confidence 344566888888899999999877666777799888643
No 187
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=69.66 E-value=22 Score=28.96 Aligned_cols=117 Identities=13% Similarity=0.047 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHH--HHHHHHHhC-C---------ceEEEEecCCCCChHHHHHHHHhhcCC
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVE--LFLKNAAQH-R---------KFQCIVMENSPENKGHELAVSLAKSKI 102 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~--~~L~~A~~~-~---------~f~ViV~Es~P~~eG~~la~~L~~~GI 102 (165)
...++.|+++. -+....+++|-|.+..+. ..+....++ + .-+|++.+ |.+.+... .+...|.
T Consensus 73 ~~lr~~ia~~~--~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~--p~y~~~~~--~~~~~g~ 146 (423)
T 3ez1_A 73 PSARALFAGYL--DVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTV--PGYDRHFL--LLQTLGF 146 (423)
T ss_dssp HHHHHHHHHHT--TSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEE--SCCHHHHH--HHHHHTC
T ss_pred HHHHHHHHHHh--CCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcC--CCcHHHHH--HHHHcCC
Confidence 56677777754 234456777777766654 333332221 2 35677654 66655433 3455677
Q ss_pred ceEEEcc-------chHHHhc---hhCCEEEEccceeecCCCeeehhcHHHHHHHH-hhCCCcEEE
Q psy2575 103 QTVLIPD-------SAMFGLI---SRVNKIIIGTHTVMANGGLRSVCGTHAVALAA-QHYSIPYPC 157 (165)
Q Consensus 103 ~v~~I~d-------sav~~~m---~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A-k~~~vPv~V 157 (165)
++..++. ..+...+ ++...|++-...=.+.|.++..---..++-+| +++++++++
T Consensus 147 ~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 147 ELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp EEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred EEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 7766542 2333444 23334433332334456666555555677777 889988775
No 188
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=69.61 E-value=34 Score=28.58 Aligned_cols=123 Identities=14% Similarity=0.042 Sum_probs=68.0
Q ss_pred CChHHHHHHHHHHhcccC---CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHH-HHHHhhc------C
Q psy2575 33 FANPTSDTAPSQACEHIH---SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHEL-AVSLAKS------K 101 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~---~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~l-a~~L~~~------G 101 (165)
+....+.++++...++.. ...+++|-|.|..++..|+.+.. ..+-+|++.+ |.+.|..+ +..+... +
T Consensus 101 ~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~--~~yhG~~~~~~~~~~~~~~~~~~ 178 (451)
T 3oks_A 101 TPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFD--HAYHGRTNLTMALTAKVMPYKDG 178 (451)
T ss_dssp SCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEET--TCCCCSSHHHHHHCCCCTTTTTT
T ss_pred cCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEc--CCcCCccHHHHHhcCCCcccccC
Confidence 344556677776666664 23577777888888888877665 2233555553 34444433 2233211 1
Q ss_pred -----CceEEEccc------------------hHHH---hch----hCCEEEEccceeecCCCeeehhc--HHHHHHHHh
Q psy2575 102 -----IQTVLIPDS------------------AMFG---LIS----RVNKIIIGTHTVMANGGLRSVCG--THAVALAAQ 149 (165)
Q Consensus 102 -----I~v~~I~ds------------------av~~---~m~----~v~~VllGAd~V~~nG~vvnk~G--T~~lAl~Ak 149 (165)
-.+..++.. .+.. .+. .-+...+=.+-+..+|+++...- -..++-+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~ 258 (451)
T 3oks_A 179 FGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCR 258 (451)
T ss_dssp CCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHH
Confidence 134444422 1111 111 12334444466888887765433 456788899
Q ss_pred hCCCcEEE
Q psy2575 150 HYSIPYPC 157 (165)
Q Consensus 150 ~~~vPv~V 157 (165)
+|++++++
T Consensus 259 ~~g~~lI~ 266 (451)
T 3oks_A 259 KNDVVFIA 266 (451)
T ss_dssp HTTCEEEE
T ss_pred HcCCEEEE
Confidence 99998875
No 189
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=69.59 E-value=33 Score=29.61 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=69.0
Q ss_pred ccCCCCEEEEecCCHHHHHHH-HHHHhCCce-EEEEecCCCC-C-hHHHHHHHHhhcCCceEEEc-c----chHHHhchh
Q psy2575 48 HIHSNEIILTLGYSKIVELFL-KNAAQHRKF-QCIVMENSPE-N-KGHELAVSLAKSKIQTVLIP-D----SAMFGLISR 118 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L-~~A~~~~~f-~ViV~Es~P~-~-eG~~la~~L~~~GI~v~~I~-d----sav~~~m~~ 118 (165)
.++++.++|+.|.+.-+=..+ ....+ +.. +|+++.-++. . .-.++..+|.+.|.+++++. | .++..++.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~-~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~ 300 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLAR-RGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG 300 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHH-HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHH-cCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHH
Confidence 356788888888877663333 33323 223 4555543332 2 23567788888888877663 3 345556655
Q ss_pred C------CEEEEccceeecCCCe-------------eehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 119 V------NKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 119 v------~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
+ |.||-.| .+..++.+ .|-.|+..+..+++..+...+|+..+.
T Consensus 301 i~~~g~ld~VIh~A-G~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~ 362 (486)
T 2fr1_A 301 IGDDVPLSAVFHAA-ATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSF 362 (486)
T ss_dssp SCTTSCEEEEEECC-CCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEH
T ss_pred HHhcCCCcEEEECC-ccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCh
Confidence 4 5555544 23333322 256789999988888888888877653
No 190
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=69.55 E-value=29 Score=26.92 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=43.0
Q ss_pred EEEEecCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhch--hC
Q psy2575 54 IILTLGYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLIS--RV 119 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~--~v 119 (165)
.||.-|.+++++.++...+++. .++|. |+-.+|...|.+.| .+.|||+..+.. ..+...++ +.
T Consensus 4 ~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~ 80 (212)
T 1jkx_A 4 VVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA---RQAGIATHTLIASAFDSREAYDRELIHEIDMYAP 80 (212)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH---HHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred EEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH---HHcCCcEEEeCcccccchhhccHHHHHHHHhcCC
Confidence 3556677777776666555442 35543 34345666666555 458999988752 34444454 47
Q ss_pred CEEEEccc
Q psy2575 120 NKIIIGTH 127 (165)
Q Consensus 120 ~~VllGAd 127 (165)
|.+++.+-
T Consensus 81 Dliv~agy 88 (212)
T 1jkx_A 81 DVVVLAGF 88 (212)
T ss_dssp SEEEESSC
T ss_pred CEEEEeCh
Confidence 88887654
No 191
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=69.42 E-value=9.4 Score=28.25 Aligned_cols=37 Identities=8% Similarity=-0.152 Sum_probs=22.6
Q ss_pred hHHHHHHHHhhcCCceEEEccchHHHhchh---CCEEEEc
Q psy2575 89 KGHELAVSLAKSKIQTVLIPDSAMFGLISR---VNKIIIG 125 (165)
Q Consensus 89 eG~~la~~L~~~GI~v~~I~dsav~~~m~~---v~~VllG 125 (165)
+=.+.++.+++.|+++..|++..-..+-+. +|.++.-
T Consensus 124 ~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 124 DIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEe
Confidence 334456666677777777776654444444 7776654
No 192
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=69.37 E-value=8.7 Score=35.14 Aligned_cols=68 Identities=16% Similarity=0.300 Sum_probs=45.1
Q ss_pred CEEEEecCCH--HHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhh---cCCceEEEccchHHHhch-hCCEEE
Q psy2575 53 EIILTLGYSK--IVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAK---SKIQTVLIPDSAMFGLIS-RVNKII 123 (165)
Q Consensus 53 ~~ILT~g~S~--tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~---~GI~v~~I~dsav~~~m~-~v~~Vl 123 (165)
.+||..|.++ .+...+..+++ +++++||.+|..|.-. .++++.+ .+=.|++|...+=-.-++ +||.++
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~---~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV---VTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH---HHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH---HHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 4788876554 66667776666 7889999999988532 3333332 345688888665554554 588777
No 193
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=69.18 E-value=17 Score=29.49 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=53.8
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEE-EecCCCCChHHHHHHHHhhcCCceEEEccchHHHhc--hhCCEEEEccceee
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLI--SRVNKIIIGTHTVM 130 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m--~~v~~VllGAd~V~ 130 (165)
.|..+|.+.-...++... ...+++. |++..|......+++...+.|+++....| ...++ +++|.|++..-
T Consensus 4 rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~vD~V~I~tp--- 76 (337)
T 3ip3_A 4 KICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNN--WWEMLEKEKPDILVINTV--- 76 (337)
T ss_dssp EEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSS--HHHHHHHHCCSEEEECSS---
T ss_pred EEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCC--HHHHhcCCCCCEEEEeCC---
Confidence 456667654333333322 4567765 67777654556677777778886655554 33334 45999998632
Q ss_pred cCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 131 ANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 131 ~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+ .--+.+++.|-+.+++|++
T Consensus 77 -~------~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 77 -F------SLNGKILLEALERKIHAFV 96 (337)
T ss_dssp -H------HHHHHHHHHHHHTTCEEEE
T ss_pred -c------chHHHHHHHHHHCCCcEEE
Confidence 1 1124567777778888664
No 194
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=69.18 E-value=7.5 Score=28.42 Aligned_cols=48 Identities=6% Similarity=0.040 Sum_probs=35.4
Q ss_pred EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 79 CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 79 ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
+++.-|.-..+-.+.++.+++.|+++..|++..-..+-+.+|.++.-.
T Consensus 101 I~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 101 IAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp EEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred EEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 334444434455677888999999999999987777777899888654
No 195
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=69.08 E-value=9.6 Score=29.50 Aligned_cols=106 Identities=7% Similarity=-0.086 Sum_probs=59.5
Q ss_pred EEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCC-----ChHHHHHHHHhhcCCceEEEc----c-chHHHhchhCCEE
Q psy2575 54 IILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPE-----NKGHELAVSLAKSKIQTVLIP----D-SAMFGLISRVNKI 122 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~-----~eG~~la~~L~~~GI~v~~I~----d-sav~~~m~~v~~V 122 (165)
.++-.||+..+...|..-.+ .+.-+|.++..... ...+...+.|.+.|+++..+. + ......+.++|.+
T Consensus 4 ~l~l~s~~~~~~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I 83 (206)
T 3l4e_A 4 NLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFI 83 (206)
T ss_dssp EEEEESCGGGCHHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEE
T ss_pred heEEeecccchHHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEE
Confidence 46777887777666665432 22345555542221 234667889999999998883 2 2233567778888
Q ss_pred EEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 123 IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 123 llGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+++-=.-+.=...+.+.|-..+-.-+-+.++|++-.|
T Consensus 84 ~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 84 YVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp EECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred EECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 8763111111112334444443333334588888654
No 196
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=69.03 E-value=23 Score=29.48 Aligned_cols=111 Identities=9% Similarity=-0.055 Sum_probs=58.3
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHH-HH-HhhcCCceEEEccchH--
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELA-VS-LAKSKIQTVLIPDSAM-- 112 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la-~~-L~~~GI~v~~I~dsav-- 112 (165)
.+...+..+++....+.+++-|.+..+.. +.... ++.-+|++.+ |.+.|. ... .. +...|+++..++...+
T Consensus 69 ~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~-~~gd~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 144 (400)
T 3nmy_A 69 RFAYERCVAALEGGTRAFAFASGMAATST-VMELL-DAGSHVVAMD--DLYGGTFRLFERVRRRTAGLDFSFVDLTDPAA 144 (400)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTS-CTTCEEEEES--SCCHHHHHHHHHTHHHHHCCEEEEECTTSHHH
T ss_pred HHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHc-CCCCEEEEeC--CCchHHHHHHHHhhHhhcCeEEEEECCCCHHH
Confidence 44444444444443445555444434333 22211 3344666654 555443 333 33 6678999999874333
Q ss_pred -HHhch-hCCEEEEccceee-cCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 113 -FGLIS-RVNKIIIGTHTVM-ANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 113 -~~~m~-~v~~VllGAd~V~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
...+. +...|++ +.+. +.|.+. . -..++-+|+++++++++
T Consensus 145 l~~~i~~~~~~v~~--e~~~np~G~~~-~--l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 145 FKAAIRADTKMVWI--ETPTNPMLKLV-D--IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp HHHHCCTTEEEEEE--ESSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred HHHHhccCCCEEEE--ECCCCCCCeee-c--HHHHHHHHHHcCCEEEE
Confidence 33343 2333333 2333 334444 3 55788899999999886
No 197
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=68.76 E-value=50 Score=27.54 Aligned_cols=119 Identities=14% Similarity=0.066 Sum_probs=63.7
Q ss_pred ChHHHHHHHHHHhcc--c-CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc-
Q psy2575 34 ANPTSDTAPSQACEH--I-HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD- 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~--I-~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d- 109 (165)
....++.|++...+. + ...++++|-|.+..+...+.... ++.-+|++.+ |.+.|... .+...|.++..++.
T Consensus 120 ~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~-~~Gd~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~ 194 (448)
T 3aow_A 120 FTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFL-NPGDIVVVEA--PTYLAALQ--AFNFYEPQYIQIPLD 194 (448)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHC-CTTCEEEEEE--SCCHHHHH--HHHTTCCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHc-CCCCEEEEeC--CChHHHHH--HHHHcCCEEEEeccC
Confidence 356788888765322 2 34466666666655555555443 3344666653 66666443 34457877776653
Q ss_pred ------chHHHhch----h---CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 ------SAMFGLIS----R---VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 ------sav~~~m~----~---v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.++...+. + ...|++-...-.+.|.+...-=-..++-+|+++++++++
T Consensus 195 ~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 195 DEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 23333443 2 222222222222334444332234678889999998875
No 198
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=68.71 E-value=17 Score=30.40 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=42.5
Q ss_pred ecCCHHHHHHHHHHHh--CCc--e--EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeec
Q psy2575 58 LGYSKIVELFLKNAAQ--HRK--F--QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMA 131 (165)
Q Consensus 58 ~g~S~tV~~~L~~A~~--~~~--f--~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~ 131 (165)
.-|+..+.+.+..+.+ +.+ + =||++-+-|.++...=.+.++.. |+|+|--
T Consensus 199 ~~yd~~Lr~~a~~aA~~~gi~~~~~~Gvy~~~~GP~FeT~AE~r~~r~~------------------------GadaVgM 254 (324)
T 3phb_E 199 DAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKL------------------------GADAVGM 254 (324)
T ss_dssp TCSCHHHHHHHHHHHTTSCCSSCCEEEEEEECCCSSCCCHHHHHHHHHH------------------------TCSEEES
T ss_pred CCCCHHHHHHHHHHHHHcCCCceEeceEEEEecCCEEeCHHHHHHHHHc------------------------CCcEEec
Confidence 3466667666666655 222 2 26666667776643322333222 6666554
Q ss_pred CCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 132 NGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 132 nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
. |.+.|.+|+++++||.+++
T Consensus 255 e--------t~pEa~vAr~~gi~~~~Is 274 (324)
T 3phb_E 255 S--------TVPEVIVARHCGLRVFGFS 274 (324)
T ss_dssp S--------SHHHHHHHHHTTCEEEEEE
T ss_pred C--------hHHHHHHHHHCCCCEEEEE
Confidence 4 5788889999999988765
No 199
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=68.58 E-value=41 Score=27.09 Aligned_cols=24 Identities=13% Similarity=-0.161 Sum_probs=18.3
Q ss_pred ehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 137 SVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 137 nk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|-.|+..+.-+|++.+++-+|...
T Consensus 120 Nv~g~~~ll~a~~~~~~~~iv~~S 143 (397)
T 1gy8_A 120 NVVGILRLLQAMLLHKCDKIIFSS 143 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhHHHHHHHHHHHHhCCCEEEEEC
Confidence 457999999999998876555543
No 200
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=68.27 E-value=11 Score=32.51 Aligned_cols=97 Identities=16% Similarity=0.040 Sum_probs=58.8
Q ss_pred HHHHhcccCCCCEEEEecCCHH---HHHHHHHHHh-CCceEEEEecC-C----------------CCChHHHHHHHHhhc
Q psy2575 42 PSQACEHIHSNEIILTLGYSKI---VELFLKNAAQ-HRKFQCIVMEN-S----------------PENKGHELAVSLAKS 100 (165)
Q Consensus 42 a~~a~~~I~~~~~ILT~g~S~t---V~~~L~~A~~-~~~f~ViV~Es-~----------------P~~eG~~la~~L~~~ 100 (165)
++.|.++|+||++|...++... +.+.|.+..+ -++++++-.-+ . |.+-|..+++..++-
T Consensus 9 aeeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~~kdLtl~~~~s~g~~~~~~~~l~~~i~~~~~~~~~~lr~~i~~G 88 (436)
T 2oas_A 9 ALEAVSLIRSGETLWTHSMGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPLLQSG 88 (436)
T ss_dssp HHHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHHHHTT
T ss_pred HHHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhccCCCEEEEEecccCChhhhHHHhcCcEEEeecCCCHHHHHHHHcC
Confidence 3556778999999999776533 3333333222 36788875321 1 112233455666555
Q ss_pred CCceEEEccchHHHhch----hCCEEEEccceeecCCCeeeh
Q psy2575 101 KIQTVLIPDSAMFGLIS----RVNKIIIGTHTVMANGGLRSV 138 (165)
Q Consensus 101 GI~v~~I~dsav~~~m~----~v~~VllGAd~V~~nG~vvnk 138 (165)
+++.+-+-.+.+..++. .+|.+++-+...-.+|.+.-.
T Consensus 89 ~~~y~P~~ls~~~~~l~~~~l~~DVAlI~as~aD~~Gn~s~~ 130 (436)
T 2oas_A 89 DADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGMCSLG 130 (436)
T ss_dssp SSEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEECT
T ss_pred CCeeeCCccccHHHHHHcCCCCCCEEEEEeccCCCCceEEEe
Confidence 55544444555554443 389999999998889987654
No 201
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=68.26 E-value=22 Score=26.22 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=57.8
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE---ccchHHHhchhCCEEEEcccee
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI---PDSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I---~dsav~~~m~~v~~VllGAd~V 129 (165)
.+|++.|.+.-+=..|......+..+|+++.-+|...- .+ ..++.+... ....+..+++++|.|+--|-..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK-----IE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC-----CC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch-----hc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 57889998877755444444335578888865543210 00 022222211 1234556677788777655322
Q ss_pred ecCC--CeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 130 MANG--GLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 130 ~~nG--~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
..+- --.|..|+..+.-+|+..+++-+|...
T Consensus 79 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 79 WNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 1111 112788999999999999987665543
No 202
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=68.25 E-value=42 Score=26.38 Aligned_cols=104 Identities=14% Similarity=0.145 Sum_probs=58.1
Q ss_pred hcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--cc--------hHHHh
Q psy2575 46 CEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--DS--------AMFGL 115 (165)
Q Consensus 46 ~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--ds--------av~~~ 115 (165)
++++....+++|-|.+..+...+..+. ++.-+|++. .|.+.+...+ +...|.++..++ .. .+...
T Consensus 64 a~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 138 (371)
T 2e7j_A 64 PKFLGCDVARVTNGAREAKFAVMHSLA-KKDAWVVMD--ENCHYSSYVA--AERAGLNIALVPKTDYPDYAITPENFAQT 138 (371)
T ss_dssp HHHTTSSEEEEESSHHHHHHHHHHHHC-CTTCEEEEE--TTCCHHHHHH--HHHTTCEEEEECCCCTTTCCCCHHHHHHH
T ss_pred HHHcCCCEEEEeCChHHHHHHHHHHHh-CCCCEEEEc--cCcchHHHHH--HHHcCCeEEEeecccCCCCCcCHHHHHHH
Confidence 334433355555555555555555443 344566666 4556555444 667899888887 22 23334
Q ss_pred chh-----CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 116 ISR-----VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 116 m~~-----v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+.+ -.++++-...-.+.|.+... ..++-+|+++++++++
T Consensus 139 l~~~~~~~~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~ 182 (371)
T 2e7j_A 139 IEETKKRGEVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLV 182 (371)
T ss_dssp HHHHTTTSCEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEE
T ss_pred HHhhcccCCeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEE
Confidence 431 12333323222345555542 7788899999999886
No 203
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=68.07 E-value=27 Score=28.58 Aligned_cols=94 Identities=9% Similarity=0.125 Sum_probs=62.5
Q ss_pred HHHhccc--CCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhh-cCCceEEEccchHHHhchh
Q psy2575 43 SQACEHI--HSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAK-SKIQTVLIPDSAMFGLISR 118 (165)
Q Consensus 43 ~~a~~~I--~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~-~GI~v~~I~dsav~~~m~~ 118 (165)
..+.+++ .+..+|+.+|.+..-...+....+ ..--+|.|.+-. .-..+++++.+ .|+++... .....+++
T Consensus 110 ~laa~~La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g~~~~~~---~~~eav~~ 183 (313)
T 3hdj_A 110 VLAAGALARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCGVPARMA---APADIAAQ 183 (313)
T ss_dssp HHHHHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHTSCEEEC---CHHHHHHH
T ss_pred HHHHHhhccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcCCeEEEe---CHHHHHhh
Confidence 3445555 356799999998766555554444 233456666555 55678888875 58887665 35667789
Q ss_pred CCEEEEccc--------eeecCCCeeehhcHH
Q psy2575 119 VNKIIIGTH--------TVMANGGLRSVCGTH 142 (165)
Q Consensus 119 v~~VllGAd--------~V~~nG~vvnk~GT~ 142 (165)
+|.|+...- ..+..|..++.+|++
T Consensus 184 aDIVi~aT~s~~pvl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 184 ADIVVTATRSTTPLFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp CSEEEECCCCSSCSSCGGGCCTTCEEEECCCS
T ss_pred CCEEEEccCCCCcccCHHHcCCCcEEEECCCC
Confidence 999986432 124568899988886
No 204
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=68.05 E-value=44 Score=26.64 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=60.5
Q ss_pred HHHHHHHhcccC--CCCEEEEecC-CHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc-----
Q psy2575 39 DTAPSQACEHIH--SNEIILTLGY-SKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS----- 110 (165)
Q Consensus 39 ~~Ia~~a~~~I~--~~~~ILT~g~-S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds----- 110 (165)
+.+.+..++++. +.+.|+..+. +..+...+.... ++.-+|++.+ |.+.|..+...+...|.++..++..
T Consensus 49 ~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~-~~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 125 (411)
T 3nnk_A 49 NEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI-RPGDKVLVPV--FGRFGHLLCEIARRCRAEVHTIEVPWGEVF 125 (411)
T ss_dssp HHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCC
T ss_pred HHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc-CCCCEEEEec--CCchHHHHHHHHHHcCCeEEEEecCCCCCC
Confidence 333444444443 3333444443 434454555443 3445677664 5555555666777789888877632
Q ss_pred ---hHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ---AMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ---av~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+. +...|++- ..=.+.|.+ .. --.++-+|+++++++++
T Consensus 126 d~~~l~~~i~~~~~~~v~~~-~~~nptG~~-~~--l~~i~~l~~~~~~~li~ 173 (411)
T 3nnk_A 126 TPDQVEDAVKRIRPRLLLTV-QGDTSTTML-QP--LAELGEICRRYDALFYT 173 (411)
T ss_dssp CHHHHHHHHHHHCCSEEEEE-SEETTTTEE-CC--CTTHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHhhCCCeEEEEe-CCCCCccee-cc--HHHHHHHHHHcCCEEEE
Confidence 3333443 45555553 222344443 33 23588889999998876
No 205
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=68.01 E-value=9.9 Score=26.55 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=31.7
Q ss_pred CceEEEEecCCCCChHHHHH----HHHhhcCCce--EEEccchHHHhchhCCEEEEccce
Q psy2575 75 RKFQCIVMENSPENKGHELA----VSLAKSKIQT--VLIPDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la----~~L~~~GI~v--~~I~dsav~~~m~~v~~VllGAd~ 128 (165)
+..+++++-+.=...+..++ +.+.+.|+++ .-...+.+...+.++|.++.+.+-
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~~l 79 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARV 79 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESSCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECCcc
Confidence 34566665554444444444 3445678764 444444454456789999998764
No 206
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=67.96 E-value=43 Score=26.43 Aligned_cols=113 Identities=11% Similarity=0.121 Sum_probs=57.4
Q ss_pred HHHHHHHHhcccC--CC-CEEEEecC-CHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc---
Q psy2575 38 SDTAPSQACEHIH--SN-EIILTLGY-SKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--- 110 (165)
Q Consensus 38 ~~~Ia~~a~~~I~--~~-~~ILT~g~-S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--- 110 (165)
.+.+.+..++++. .+ +.+++.+. +..+...+... -++.-+|++.+ |..-+......+...|.++..++..
T Consensus 54 ~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~-~~~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 130 (376)
T 3f0h_A 54 MLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNC-FTKKDKVLVID--GGSFGHRFVQLCEIHEIPYVALKLEHGK 130 (376)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHH-CCTTCCEEEEE--SSHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhc-cCCCCeEEEEe--CChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence 3444444444442 22 45553443 33434444433 33444666664 3333444555566678888776532
Q ss_pred -----hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -----AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -----av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+. +...+++. ..=.+.|.+.. -..++-+|+++++++++
T Consensus 131 ~~d~~~l~~~~~~~~~~v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 179 (376)
T 3f0h_A 131 KLTKEKLYEYDNQNFTGLLVN-VDETSTAVLYD---TMMIGEFCKKNNMFFVC 179 (376)
T ss_dssp CCCHHHHHTTTTSCCCEEEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHhhccCceEEEEe-cccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 1222222 23334332 22234444443 56688899999999886
No 207
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=67.96 E-value=26 Score=27.58 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=52.9
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--------hHHHhchh-CCEEEE
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--------AMFGLISR-VNKIII 124 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--------av~~~m~~-v~~Vll 124 (165)
+++|-|.+..+. .+.... ++.-+|++.+ |.+.|..+.......|.++..++.. .+-..+.+ -.++++
T Consensus 57 v~~~~g~t~al~-~~~~~~-~~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~ 132 (384)
T 3zrp_A 57 LIIPGGGTSAME-SVTSLL-KPNDKILVVS--NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVA 132 (384)
T ss_dssp EEEESCHHHHHH-HGGGGC-CTTCEEEEEC--SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEE
T ss_pred EEEcCCcHHHHH-HHHhhc-CCCCEEEEec--CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEE
Confidence 566666555555 544332 3444666654 4444544555556778888877632 23333333 123333
Q ss_pred ccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 125 GTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 125 GAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
-...=.+.|.+.. -..++-+|+++++++++
T Consensus 133 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 133 LTHVETSTGVREP---VKDVINKIRKYVELIVV 162 (384)
T ss_dssp EESEETTTTEECC---HHHHHHHHGGGEEEEEE
T ss_pred EeCCCCCCceECc---HHHHHHHHHhcCCEEEE
Confidence 3333333444433 34688889999988876
No 208
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=67.93 E-value=4.5 Score=34.91 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=29.3
Q ss_pred hchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 115 LISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 115 ~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
.++++|.||.|==.+-.. ++..| -...+|..||+|++||+++|..
T Consensus 284 ~l~~ADLVITGEG~~D~Q-tl~GK-~p~gVa~~A~~~~vPviaiaG~ 328 (383)
T 3cwc_A 284 CLADADLVITGEGRIDSQ-TIHGK-VPIGVANIAKRYNKPVIGIAGS 328 (383)
T ss_dssp HHHHCSEEEECCEESCC-----CH-HHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhcCCCEEEECCCCCcCc-CCCCc-HHHHHHHHHHHhCCCEEEEeCC
Confidence 445799999996332221 22222 2356788999999999999864
No 209
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=67.92 E-value=14 Score=28.27 Aligned_cols=108 Identities=8% Similarity=0.079 Sum_probs=63.9
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.++++.|.|+-+=..+....-.+..+|++...++......+++.+.+.|.++..+. | .++..++. +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3567888887776644333332235578888777665566677888888887766553 2 23334443 5
Q ss_pred CCEEEEccceeecCCC-------------eeehhcHHHHHHHH----hhCCCcEEEEe
Q psy2575 119 VNKIIIGTHTVMANGG-------------LRSVCGTHAVALAA----QHYSIPYPCTF 159 (165)
Q Consensus 119 v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~~ 159 (165)
+|.++--|- +...+. -+|-.|++.+..++ ++.+.+.+|..
T Consensus 83 id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i 139 (246)
T 3osu_A 83 LDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINL 139 (246)
T ss_dssp CCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 677766552 222222 13677888888777 44445555443
No 210
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=67.90 E-value=8.6 Score=28.17 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=32.0
Q ss_pred CChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 87 ENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 87 ~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
..+-.+.++.+++.|+++..|++..-..+-+.+|.++.-.
T Consensus 100 t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 100 LRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECC
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEec
Confidence 3455677888999999999999987777777899888654
No 211
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=67.89 E-value=44 Score=27.07 Aligned_cols=119 Identities=8% Similarity=-0.045 Sum_probs=68.6
Q ss_pred ChHHHHHHHHHHhcccCCC---CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc-
Q psy2575 34 ANPTSDTAPSQACEHIHSN---EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD- 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~---~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d- 109 (165)
....++.+++.....-... .+++|-|.+..+...+.... ++.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 82 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~ 156 (418)
T 3rq1_A 82 IPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYT-EPGDEVLTAD--WYWGAYRV--ICSDTGRTLVTYSLF 156 (418)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHS-CTTCEEEEES--SCCTHHHH--HHHHTTCEEEEECSB
T ss_pred hHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhc-CCCCEEEECC--CCchhHHH--HHHHcCCEEEEEeee
Confidence 3566888888664443333 56666666655555554332 3445677765 66655433 34567888887763
Q ss_pred --------chHHHhch-----hCCEEEEccce-eecCCCeeehhcHHHHHHHHh------hCCCcEEE
Q psy2575 110 --------SAMFGLIS-----RVNKIIIGTHT-VMANGGLRSVCGTHAVALAAQ------HYSIPYPC 157 (165)
Q Consensus 110 --------sav~~~m~-----~v~~VllGAd~-V~~nG~vvnk~GT~~lAl~Ak------~~~vPv~V 157 (165)
..+-..+. +..++++=..- --+.|.+...---..++-.|+ ++++++++
T Consensus 157 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 157 DEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 12223333 23323332222 356687777777777877777 77776664
No 212
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=67.67 E-value=22 Score=31.14 Aligned_cols=115 Identities=11% Similarity=0.071 Sum_probs=67.1
Q ss_pred ccCCCCEEEEecCCHHHHHHHH-HHHhCCceE-EEEe-cCCC------------CChHHHHHHHHhhcCCceEEEc-c--
Q psy2575 48 HIHSNEIILTLGYSKIVELFLK-NAAQHRKFQ-CIVM-ENSP------------ENKGHELAVSLAKSKIQTVLIP-D-- 109 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~-~A~~~~~f~-ViV~-Es~P------------~~eG~~la~~L~~~GI~v~~I~-d-- 109 (165)
.++++.++|+.|.+.-+=..+. ...+ +..+ |+++ .-++ ...-.+++.+|.+.|.+++++. |
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~-~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLAR-DGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT 325 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHH-HTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHH-cCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence 4677889999888766533332 2222 2234 3333 3222 1233577888999998888764 2
Q ss_pred --chHHHhchh------CCEEEEccceeecCCCe-------------eehhcHHHHHHHHhhCC-----CcEEEEeeccc
Q psy2575 110 --SAMFGLISR------VNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQHYS-----IPYPCTFLLNI 163 (165)
Q Consensus 110 --sav~~~m~~------v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~~~-----vPv~V~~~~~~ 163 (165)
.++..++.+ +|.||-.| .+..++.+ .|-.|+..+..++..+. ..++|+..+.-
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~A-Gv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a 404 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLP-PTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVA 404 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECC-CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGG
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECC-cCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHH
Confidence 344555554 45555444 33344332 35678888888888776 67888776543
Q ss_pred C
Q psy2575 164 G 164 (165)
Q Consensus 164 ~ 164 (165)
|
T Consensus 405 ~ 405 (525)
T 3qp9_A 405 A 405 (525)
T ss_dssp G
T ss_pred H
Confidence 3
No 213
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=67.24 E-value=44 Score=27.00 Aligned_cols=118 Identities=13% Similarity=0.067 Sum_probs=65.4
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++..... +....+++|-|.+..+...+..+.+ +.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 80 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~-~gd~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~ 154 (406)
T 1xi9_A 80 LPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLD-PGDEILVPG--PSYPPYTG--LVKFYGGKPVEYRT 154 (406)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCHHHHH--HHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCC-CCCEEEEcC--CCCccHHH--HHHHcCCEEEEeec
Confidence 356788888776442 3445677777767666666655433 334666654 55555433 33457877776653
Q ss_pred c----------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 S----------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 s----------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. .+...+. +...|++. ..-.+.|.+....=-..++-+|+++++++++
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 155 IEEEDWQPDIDDIRKKITDRTKAIAVI-NPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp EGGGTSEECHHHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCcCCcCCHHHHHHhhCcCceEEEEE-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2 1222232 22233332 2222344444333345677889999998876
No 214
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=67.18 E-value=41 Score=27.68 Aligned_cols=112 Identities=11% Similarity=-0.068 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHH-HHhhcCCceEEEcc---c
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAV-SLAKSKIQTVLIPD---S 110 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~-~L~~~GI~v~~I~d---s 110 (165)
..++.+++ ++.-.+.|++-|.+..+...+.... ++.-+|++. .|.+.+. ...+ .+...|+++..++. .
T Consensus 66 ~l~~~ia~----~~g~~~~i~~~~g~~ai~~~~~~l~-~~gd~Vl~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~ 138 (404)
T 1e5e_A 66 NLEGKIAF----LEKTEACVATSSGMGAIAATVLTIL-KAGDHLISD--ECLYGCTHALFEHALTKFGIQVDFINTAIPG 138 (404)
T ss_dssp HHHHHHHH----HHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTT
T ss_pred HHHHHHHH----HhCCCcEEEeCChHHHHHHHHHHHh-CCCCEEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHH
Confidence 34444544 4443355555555434343443332 344567765 4665543 2222 46678999998874 2
Q ss_pred hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhh-CCCcEEE
Q psy2575 111 AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-YSIPYPC 157 (165)
Q Consensus 111 av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V 157 (165)
.+...+..-+++++-...--+.|.+.. -..++-+|++ +++++++
T Consensus 139 ~l~~~i~~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~ 183 (404)
T 1e5e_A 139 EVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIA 183 (404)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEE
T ss_pred HHHHhcCCCCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEE
Confidence 344444332233332222234455543 4678888999 9998876
No 215
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=67.05 E-value=10 Score=31.35 Aligned_cols=93 Identities=8% Similarity=0.084 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhcc----cCC-CCEEEEecCCHHHHHHHHHHHhC----CceEEEEecC----CCCChHHHHHHHHhhc-C
Q psy2575 36 PTSDTAPSQACEH----IHS-NEIILTLGYSKIVELFLKNAAQH----RKFQCIVMEN----SPENKGHELAVSLAKS-K 101 (165)
Q Consensus 36 ~~~~~Ia~~a~~~----I~~-~~~ILT~g~S~tV~~~L~~A~~~----~~f~ViV~Es----~P~~eG~~la~~L~~~-G 101 (165)
+.++.|++.|+++ |++ +++ +-+++++|+..+.....+. ++.+++-++. .|......+++.|.+. |
T Consensus 122 ~~k~~ia~~AA~~l~~~i~~~~~~-igl~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~~~ 200 (345)
T 2o0m_A 122 KVLSDFGDVLTNTLNLLLPNGENT-IAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVMANKTG 200 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEE-EEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCcCCCE-EEECCcHHHHHHHHHhhhccCCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHHhC
Confidence 3577899888885 888 665 4568888988877765431 3456554432 2333455678888775 7
Q ss_pred CceEE--Eccch---H-HHhc------------hhCCEEEEcccee
Q psy2575 102 IQTVL--IPDSA---M-FGLI------------SRVNKIIIGTHTV 129 (165)
Q Consensus 102 I~v~~--I~dsa---v-~~~m------------~~v~~VllGAd~V 129 (165)
++... +|+.. . ..++ .++|+.|+|.-..
T Consensus 201 ~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~ 246 (345)
T 2o0m_A 201 GNYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRA 246 (345)
T ss_dssp CEECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEH
T ss_pred CceEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCc
Confidence 76664 33211 1 1112 3699999998653
No 216
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=66.94 E-value=8.7 Score=29.22 Aligned_cols=32 Identities=3% Similarity=-0.049 Sum_probs=15.0
Q ss_pred HHHHHhhcCCceEEEccchHHHhchhC---CEEEE
Q psy2575 93 LAVSLAKSKIQTVLIPDSAMFGLISRV---NKIII 124 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav~~~m~~v---~~Vll 124 (165)
.++..++.|+++..|++..-+.+-+.+ |.++.
T Consensus 133 ~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 133 AVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp HHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred HHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 344444455555555544433334444 55553
No 217
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=66.92 E-value=26 Score=23.58 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=49.6
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhh-cCCceEEEccc--h-HH-HhchhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAK-SKIQTVLIPDS--A-MF-GLISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~-~GI~v~~I~ds--a-v~-~~m~~v~~VllGA 126 (165)
+..|+.+|.+..=..+.....+ ...+|++.+..|. .++.+.+ .|+.+...... . +. ..+.++|.|++..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~~-----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDKD-----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHH-----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHH-----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 3568888988655555554444 3467888876543 2344443 46654332211 1 11 1256789888875
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
..- .-...++.+|+.++.+-+++
T Consensus 78 ~~~---------~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 78 GKE---------EVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp SCH---------HHHHHHHHHHHHTTCCCEEE
T ss_pred CCc---------hHHHHHHHHHHHcCCCEEEE
Confidence 321 11235666788877654443
No 218
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=66.88 E-value=27 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=24.2
Q ss_pred hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEE
Q psy2575 118 RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 158 (165)
++|.+++|+.. +| +-. -.|+.. --+.++.++||+++
T Consensus 106 ~~dliV~G~~~---~~-~~~~~~Gs~~-~~v~~~~~~pVlvv 142 (143)
T 3fdx_A 106 PADLVIIASHR---PD-ITTYLLGSNA-AAVVRHAECSVLVV 142 (143)
T ss_dssp TCSEEEEESSC---TT-CCSCSSCHHH-HHHHHHCSSEEEEE
T ss_pred CCCEEEEeCCC---CC-CeeeeeccHH-HHHHHhCCCCEEEe
Confidence 59999999973 22 322 246544 34567788999986
No 219
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=66.58 E-value=38 Score=27.46 Aligned_cols=118 Identities=11% Similarity=0.092 Sum_probs=64.1
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++..... +...++++|-|.+..+...+.... ++.-+|++.+ |.+.+... .+...|.++..++.
T Consensus 81 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 81 IWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA-NPGDEILVLE--PFYANYNA--FAKIAGVKLIPVTR 155 (409)
T ss_dssp CHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEE--SCCTHHHH--HHHHHTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhC-CCCCEEEEcC--CCchhHHH--HHHHcCCEEEEecc
Confidence 356788888776542 334567888777766666666543 3344666664 45544433 34456777777653
Q ss_pred ch---------HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA---------MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa---------v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +...+. +...|++. ..-.+.|.+...-=-..++-+|+++++++++
T Consensus 156 ~~~~~~~~~~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 156 RMEEGFAIPQNLESFINERTKGIVLS-NPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp CGGGTSCCCTTGGGGCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCccHHHHHHhhCcCCeEEEEC-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 21 111222 22223332 1111234443322235677889999998876
No 220
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=66.48 E-value=16 Score=28.16 Aligned_cols=100 Identities=8% Similarity=0.054 Sum_probs=55.0
Q ss_pred EEEEecCCHHH-HHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEcccee
Q psy2575 54 IILTLGYSKIV-ELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 54 ~ILT~g~S~tV-~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd~V 129 (165)
+||+.|-+..+ ..++....+....+|+++.-+|.. +..|...|+.+.... ...+..+++.+|.|+.-+-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~-----~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK-----VPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG-----SCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH-----HHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 46777766555 333333333225667666544432 122344565544332 134556677777777654221
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
. ..-.|..|+..+.-+|+..+++-+|...
T Consensus 77 ~--~~~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 77 H--PSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp C--SHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred c--cchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 1 1123557888999999999987666544
No 221
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=66.41 E-value=24 Score=27.40 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=43.0
Q ss_pred EEEEecCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhch--hC
Q psy2575 54 IILTLGYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLIS--RV 119 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~--~v 119 (165)
.||.-|.+++++.++...+++. .++|. |+-.+|...|++.| .+.|||+.++.. ..+...++ +.
T Consensus 4 aVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~ 80 (209)
T 1meo_A 4 AVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKA---ERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI 80 (209)
T ss_dssp EEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHH---HHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence 3556677777777766544432 45654 33345566776555 457999987753 23444454 47
Q ss_pred CEEEEccc
Q psy2575 120 NKIIIGTH 127 (165)
Q Consensus 120 ~~VllGAd 127 (165)
|.+++.+-
T Consensus 81 Dliv~a~y 88 (209)
T 1meo_A 81 DIVCLAGF 88 (209)
T ss_dssp CEEEEESC
T ss_pred CEEEEcch
Confidence 88877653
No 222
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=66.33 E-value=39 Score=26.45 Aligned_cols=101 Identities=8% Similarity=0.054 Sum_probs=55.3
Q ss_pred CEEEEecCCHHHHHHH-HHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEccce
Q psy2575 53 EIILTLGYSKIVELFL-KNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L-~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd~ 128 (165)
.+||+.|.+.-+=..| ....+ +..+|+++..+|... ..|.+.++.+.... ..++..+++.+|.|+--|-.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-AGHDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 4788888776653333 33333 446788776555421 12333455443322 13456677778877765532
Q ss_pred eecC-CC-----eeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 129 VMAN-GG-----LRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 129 V~~n-G~-----vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.... .. -+|-.|+..+.-+|+.++++-+|..
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~ 124 (342)
T 2x4g_A 88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYV 124 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 2110 00 1457789999999998887555544
No 223
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=66.15 E-value=23 Score=24.23 Aligned_cols=79 Identities=8% Similarity=0.065 Sum_probs=40.7
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH- 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~- 150 (165)
+..+|+++|..|.. ...+...|.+.|+.+....+..-. ..+. ..|.|++..+. ++ .-|-..+..+.+.
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (154)
T 2rjn_A 6 KNYTVMLVDDEQPI-LNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRM--PE-----MGGEVFLEQVAKSY 77 (154)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHHhC
Confidence 34567777665532 234456666677776655443221 1222 36777776532 22 1233333333333
Q ss_pred CCCcEEEEeec
Q psy2575 151 YSIPYPCTFLL 161 (165)
Q Consensus 151 ~~vPv~V~~~~ 161 (165)
..+|+++++..
T Consensus 78 ~~~~ii~ls~~ 88 (154)
T 2rjn_A 78 PDIERVVISGY 88 (154)
T ss_dssp TTSEEEEEECG
T ss_pred CCCcEEEEecC
Confidence 46888887654
No 224
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=65.87 E-value=21 Score=28.79 Aligned_cols=72 Identities=10% Similarity=-0.044 Sum_probs=42.8
Q ss_pred CChHHHHHHHHhhcCC-ceEEEcc----chHHHhchhCCEEEEccceeec----CCCeeehhcHHHHHHHHhhCCCc-EE
Q psy2575 87 ENKGHELAVSLAKSKI-QTVLIPD----SAMFGLISRVNKIIIGTHTVMA----NGGLRSVCGTHAVALAAQHYSIP-YP 156 (165)
Q Consensus 87 ~~eG~~la~~L~~~GI-~v~~I~d----sav~~~m~~v~~VllGAd~V~~----nG~vvnk~GT~~lAl~Ak~~~vP-v~ 156 (165)
++-|..+++.|.+.|. +|..+.- ..+..+++++|.|+--|-..-. .---.|-.|+..++-+|+..+++ -+
T Consensus 10 G~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~ 89 (369)
T 3st7_A 10 GFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAI 89 (369)
T ss_dssp SHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEE
T ss_pred CHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 4556666666666665 5544332 3445566677777755422211 11224778899999999998876 34
Q ss_pred EE
Q psy2575 157 CT 158 (165)
Q Consensus 157 V~ 158 (165)
|.
T Consensus 90 v~ 91 (369)
T 3st7_A 90 LL 91 (369)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 225
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=65.54 E-value=27 Score=23.27 Aligned_cols=58 Identities=19% Similarity=0.107 Sum_probs=38.6
Q ss_pred EEEEecCCHHHHHHHHHHHh-CCceEEEEecC-CCCChHHHHHHHHhh------cCCceEEEccch
Q psy2575 54 IILTLGYSKIVELFLKNAAQ-HRKFQCIVMEN-SPENKGHELAVSLAK------SKIQTVLIPDSA 111 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es-~P~~eG~~la~~L~~------~GI~v~~I~dsa 111 (165)
.+.+..........+..... +..+.++++|- -|...|..+++.|++ ..+++.+++...
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~ 102 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSL 102 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSC
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCC
Confidence 55555555555555554332 46788888874 588899999999988 356777776543
No 226
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=65.46 E-value=46 Score=25.87 Aligned_cols=115 Identities=16% Similarity=0.128 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---
Q psy2575 35 NPTSDTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--- 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--- 109 (165)
...++.+++..- ..+ ..+++|-|.+..+...+..+.+ +.-+|++.+ .|. .+..+...+...|.++..++.
T Consensus 40 ~~l~~~la~~~g--~~~~~~~v~~~~g~t~a~~~~~~~~~~-~gd~vi~~~-~~~-~~~~~~~~~~~~g~~~~~v~~~~~ 114 (366)
T 1m32_A 40 EQIRQQLTALAT--ASEGYTSVLLQGSGSYAVEAVLGSALG-PQDKVLIVS-NGA-YGARMVEMAGLMGIAHHAYDCGEV 114 (366)
T ss_dssp HHHHHHHHHHHC--SSSSEEEEEEESCHHHHHHHHHHHSCC-TTCCEEEEE-SSH-HHHHHHHHHHHHTCCEEEEECCTT
T ss_pred HHHHHHHHHHhC--CCCcCcEEEEecChHHHHHHHHHHhcC-CCCeEEEEe-CCC-ccHHHHHHHHHhCCceEEEeCCCC
Confidence 445555655432 111 1366666666555555554432 333566553 222 222234445567888777653
Q ss_pred -----chHHHhchh--CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -----SAMFGLISR--VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -----sav~~~m~~--v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
..+-..+.+ -.++++-...=.+.|.+.. -..++-+|+++++++++
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 115 ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 123333332 1233332222223465554 35788889999998876
No 227
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=65.45 E-value=26 Score=27.27 Aligned_cols=24 Identities=8% Similarity=-0.068 Sum_probs=18.5
Q ss_pred ehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 137 SVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 137 nk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|-.|+..+.-+|+..+++-+|...
T Consensus 83 n~~~~~~l~~~~~~~~~~~~v~~S 106 (321)
T 1e6u_A 83 NMMIESNIIHAAHQNDVNKLLFLG 106 (321)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEc
Confidence 567999999999999886555443
No 228
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=65.45 E-value=8.2 Score=28.50 Aligned_cols=38 Identities=3% Similarity=-0.205 Sum_probs=25.4
Q ss_pred ChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEc
Q psy2575 88 NKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIG 125 (165)
Q Consensus 88 ~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllG 125 (165)
.+-.+.++.+++.|.++..|++..-..+-+.+|.++.-
T Consensus 130 ~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~ 167 (198)
T 2xbl_A 130 PNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEV 167 (198)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEEC
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEe
Confidence 34455677777788888888776555555667777743
No 229
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=65.44 E-value=45 Score=25.79 Aligned_cols=103 Identities=11% Similarity=0.201 Sum_probs=58.6
Q ss_pred EEEEecCCHHHHHHHHHHHh-----CCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEE--ccchHHHhc---h--hC
Q psy2575 54 IILTLGYSKIVELFLKNAAQ-----HRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLI--PDSAMFGLI---S--RV 119 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~-----~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I--~dsav~~~m---~--~v 119 (165)
+++-+.+|..-.+.|..|.+ +.+++++-+...+.. .-.++.+.|.+.|+++... .......+. . ++
T Consensus 173 Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~ 252 (294)
T 3loq_A 173 VLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINA 252 (294)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCc
Confidence 44447777765655555554 556776644333221 2235577888889875543 333233332 2 58
Q ss_pred CEEEEccceeecCCCeeeh-hcHHHHHHHHhhCCCcEEEEee
Q psy2575 120 NKIIIGTHTVMANGGLRSV-CGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 120 ~~VllGAd~V~~nG~vvnk-~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|.+++|+.. .+++-.. .|+.. --+.++..+||+++=+
T Consensus 253 dLlV~G~~~---~~~~~~~~~Gs~~-~~vl~~~~~pvLvv~~ 290 (294)
T 3loq_A 253 TTIFMGSRG---AGSVMTMILGSTS-ESVIRRSPVPVFVCKR 290 (294)
T ss_dssp SEEEEECCC---CSCHHHHHHHCHH-HHHHHHCSSCEEEECS
T ss_pred CEEEEeCCC---CCCccceeeCcHH-HHHHhcCCCCEEEECC
Confidence 999999864 2232221 34433 2445678899999744
No 230
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=65.36 E-value=23 Score=27.04 Aligned_cols=51 Identities=10% Similarity=0.146 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 65 ELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 65 ~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
..++..+.++++. +++....|.. -|..+++.|.+.|+++++|| -|++.++.
T Consensus 85 ~~i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~ 138 (232)
T 2qbu_A 85 RMVAAELEDGRDV-AFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACA 138 (232)
T ss_dssp HHHHHHHHTTCCE-EEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHH
T ss_pred HHHHHHHHCCCeE-EEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHH
Confidence 3444445445554 5566799975 56788999999999999999 45555544
No 231
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=65.36 E-value=50 Score=26.22 Aligned_cols=98 Identities=10% Similarity=0.034 Sum_probs=54.2
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--------chHHHhch--hCCEE
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--------SAMFGLIS--RVNKI 122 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--------sav~~~m~--~v~~V 122 (165)
.+++|-|.+..+...+....+ +.-+|++.+ |.+.+......+...|.++..++. ..+...+. +...|
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~-~gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v 148 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLE-DGDVILIGH--TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVL 148 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCC-TTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEEEcCcHHHHHHHHHHHHhC-CCCEEEEEC--CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEE
Confidence 355656655555555554433 334677664 444454444445667888877762 12233333 34445
Q ss_pred EEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 123 IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 123 llGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++ ...-.+.|.+.. -..++-+|+++++++++
T Consensus 149 ~~-~~~~nptG~~~~---l~~i~~~~~~~~~~li~ 179 (393)
T 2huf_A 149 FL-TQGDSSTGVLQG---LEGVGALCHQHNCLLIV 179 (393)
T ss_dssp EE-ESEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EE-EccCCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 44 233233444433 34678889999998876
No 232
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=65.28 E-value=51 Score=26.37 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHhcc----cCC-CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEH----IHS-NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~-~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...++.+++...++ +.. ..+++|-|.+..+...+....+ +.-+|++. .|.+.+.. ..+...|.++..++.
T Consensus 64 ~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~-~gd~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~ 138 (410)
T 3e2y_A 64 PALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVD-PGDEVIIM--VPFYDCYE--PMVRMAGAVPVFIPL 138 (410)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC-TTCEEEEE--ESCCTTHH--HHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC-CCCEEEEe--CCCchhhH--HHHHHcCCEEEEEec
Confidence 56677887765542 444 5788887777666666665543 33466665 34444433 334456777666653
Q ss_pred c-------------------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 S-------------------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 s-------------------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. .+...+. +...|++. ..-.+.|.++.+---..++-+|+++++++++
T Consensus 139 ~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 139 RSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILN-TPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp EECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cccccccccccccCCcCCHHHHHhhcCCCceEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 2 2222232 33344442 2233456666555566788889999998876
No 233
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=65.19 E-value=23 Score=26.21 Aligned_cols=16 Identities=13% Similarity=0.395 Sum_probs=4.8
Q ss_pred hCCEEEEccceeecCC
Q psy2575 118 RVNKIIIGTHTVMANG 133 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG 133 (165)
+++.|+.+...+..+|
T Consensus 113 ~~~~v~~~~~~~~~~~ 128 (240)
T 3bcv_A 113 TCDAVFTGLKRITMAG 128 (240)
T ss_dssp TCSEEEC---------
T ss_pred CCCEEEEeeEEEccCC
Confidence 4677776666666666
No 234
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=65.07 E-value=13 Score=30.52 Aligned_cols=104 Identities=14% Similarity=0.097 Sum_probs=65.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhc-CCceEEEccchHHHhchhCCEEEEccce
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKS-KIQTVLIPDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~-GI~v~~I~dsav~~~m~~v~~VllGAd~ 128 (165)
+-|.++.+-....+...+..+.+ +.+.-|++.+..|..+-+++.+..++. |+. ++-++.++.+-+...+.-.-+..
T Consensus 71 ~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~--liGPnc~Gii~p~~~~~~~~~~~ 148 (305)
T 2fp4_A 71 GATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR--LIGPNCPGVINPGECKIGIMPGH 148 (305)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE--EECSSSCEEEETTTEEEESSCGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE--EEeCCCCeEecccccceeecccc
Confidence 45777777777788888887776 544444555655554445777888888 865 56666666555543222211222
Q ss_pred eecCC--CeeehhcHHHHHHH--HhhCCCcEE
Q psy2575 129 VMANG--GLRSVCGTHAVALA--AQHYSIPYP 156 (165)
Q Consensus 129 V~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~ 156 (165)
+..-| +++++.|+...+++ +.+.++.|-
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S 180 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQS 180 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCee
Confidence 23334 68899999877765 566777764
No 235
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=64.93 E-value=42 Score=29.66 Aligned_cols=116 Identities=11% Similarity=0.109 Sum_probs=68.5
Q ss_pred HHHHhcc--cCCCCEEEEecCCH----HHHHHHHHHHh--CCceEEEEecCCCC-------------------ChHHHHH
Q psy2575 42 PSQACEH--IHSNEIILTLGYSK----IVELFLKNAAQ--HRKFQCIVMENSPE-------------------NKGHELA 94 (165)
Q Consensus 42 a~~a~~~--I~~~~~ILT~g~S~----tV~~~L~~A~~--~~~f~ViV~Es~P~-------------------~eG~~la 94 (165)
++.|.++ |+||++|...+... .+..+..++.+ -++++++-.-..+. +-|..+.
T Consensus 49 aeEAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r~~~~~~g~~~r 128 (509)
T 1xr4_A 49 LEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKLG 128 (509)
T ss_dssp HHHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCCHHHH
T ss_pred HHHHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEEEEEccCCHHHH
Confidence 5677888 99999999876542 33334444443 36788875422221 1122333
Q ss_pred HHHhh--cCCceEEEccchHHHhch----hCCEEEEccceeecCCCeeehhc-----HHHHHHHHhhCCCcEEE
Q psy2575 95 VSLAK--SKIQTVLIPDSAMFGLIS----RVNKIIIGTHTVMANGGLRSVCG-----THAVALAAQHYSIPYPC 157 (165)
Q Consensus 95 ~~L~~--~GI~v~~I~dsav~~~m~----~v~~VllGAd~V~~nG~vvnk~G-----T~~lAl~Ak~~~vPv~V 157 (165)
+..++ ..+|..+.+-....+++. .+|..++-+...-.+|.+.-+-| +...+.++.....-|++
T Consensus 129 ~~i~~G~~~~P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~~~~s~~~~~a~a~~A~~VIa 202 (509)
T 1xr4_A 129 EEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVL 202 (509)
T ss_dssp HHHHHTCCSSCEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEE
T ss_pred HHHHcCCCcCCeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCCcccchHHHHHHHhhCCEEEE
Confidence 33322 236666664333566664 48999999999999999875323 44444555555554554
No 236
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=64.83 E-value=52 Score=27.37 Aligned_cols=122 Identities=13% Similarity=0.061 Sum_probs=64.5
Q ss_pred ChHHHHHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHh-------CCceEEEEecCCCCChHHHH-HHHHhhc---
Q psy2575 34 ANPTSDTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQ-------HRKFQCIVMENSPENKGHEL-AVSLAKS--- 100 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~-------~~~f~ViV~Es~P~~eG~~l-a~~L~~~--- 100 (165)
.....+.+++...++.. ...+++|-|.|..++..++.+.+ ..+-+|++.+ |.+.|..+ +..+...
T Consensus 92 ~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~~ 169 (459)
T 4a6r_A 92 THPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRW--NGYHGSTIGGASLGGMKYM 169 (459)
T ss_dssp CCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TCCCCSSHHHHHHSCCTTT
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEC--CCcCCccHHHHhhcCChhh
Confidence 34455666666666653 34567777777777777776654 1345666654 33333322 2222211
Q ss_pred -------CCceEEEc-----------c---------chHHHhchh---CCEEEEccceeecCCCeee-hhcH-HHHHHHH
Q psy2575 101 -------KIQTVLIP-----------D---------SAMFGLISR---VNKIIIGTHTVMANGGLRS-VCGT-HAVALAA 148 (165)
Q Consensus 101 -------GI~v~~I~-----------d---------sav~~~m~~---v~~VllGAd~V~~nG~vvn-k~GT-~~lAl~A 148 (165)
.-.+..++ | ..+-..+.+ -+...+=.+.+..+||.+. ..+- -.++-+|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 249 (459)
T 4a6r_A 170 HEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERIC 249 (459)
T ss_dssp C---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred ccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence 11344444 1 233333432 1223333345677776654 3333 4477889
Q ss_pred hhCCCcEEE
Q psy2575 149 QHYSIPYPC 157 (165)
Q Consensus 149 k~~~vPv~V 157 (165)
++|++.+++
T Consensus 250 ~~~~~llI~ 258 (459)
T 4a6r_A 250 RKYDVLLVA 258 (459)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCEEEE
Confidence 999998775
No 237
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=64.80 E-value=21 Score=27.98 Aligned_cols=69 Identities=13% Similarity=0.214 Sum_probs=40.2
Q ss_pred EEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc----------cchHHHhchh--CCEEE
Q psy2575 56 LTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP----------DSAMFGLISR--VNKII 123 (165)
Q Consensus 56 LT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~----------dsav~~~m~~--v~~Vl 123 (165)
|.-|.++..+.++....++-+++|..+=|.|...+.+.|+ ++|||+..+. |..+...+++ +|.++
T Consensus 18 l~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~---~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv 94 (215)
T 3da8_A 18 LASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAA---EASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVV 94 (215)
T ss_dssp EESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHH---HTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEeCChHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHH---HcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCEEE
Confidence 3337777777666644322335655444444455555544 4799999885 2345555543 78888
Q ss_pred Eccc
Q psy2575 124 IGTH 127 (165)
Q Consensus 124 lGAd 127 (165)
+.+-
T Consensus 95 lagy 98 (215)
T 3da8_A 95 SAGF 98 (215)
T ss_dssp EEEC
T ss_pred EcCc
Confidence 7653
No 238
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=64.77 E-value=19 Score=27.77 Aligned_cols=24 Identities=17% Similarity=0.004 Sum_probs=17.7
Q ss_pred eehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 136 RSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 136 vnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+|-.|+..+.-+|+..++.++.+.
T Consensus 89 ~nv~~~~~l~~a~~~~~~~iv~~S 112 (292)
T 1vl0_A 89 INAIGPKNLAAAAYSVGAEIVQIS 112 (292)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEec
Confidence 356789999999988887555444
No 239
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=64.76 E-value=14 Score=29.17 Aligned_cols=104 Identities=17% Similarity=0.078 Sum_probs=55.7
Q ss_pred EEEEecCCHHHHHHH-HHHHhCCceEEEEecCCCCChHHHHHHHHhhcC-CceEEEc--c-chHHHhchh--CCEEEEcc
Q psy2575 54 IILTLGYSKIVELFL-KNAAQHRKFQCIVMENSPENKGHELAVSLAKSK-IQTVLIP--D-SAMFGLISR--VNKIIIGT 126 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L-~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~G-I~v~~I~--d-sav~~~m~~--v~~VllGA 126 (165)
+||+.|.+.-+=..| ....+ +..+|+++...+.......+..|.+.+ +.+.... | .++..++.. +|.|+--|
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALS-QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEeCCCchhHHHHHHHHHh-CCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 577778766553333 33333 446788776432222223345565544 4332221 1 345556666 77777555
Q ss_pred ceeec-----C---CCeeehhcHHHHHHHHhhCCCc-EEEE
Q psy2575 127 HTVMA-----N---GGLRSVCGTHAVALAAQHYSIP-YPCT 158 (165)
Q Consensus 127 d~V~~-----n---G~vvnk~GT~~lAl~Ak~~~vP-v~V~ 158 (165)
-.... + ---+|-.|+..+.-+|+.++++ -+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~ 122 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 122 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 32111 0 0014667999999999988875 3443
No 240
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=64.67 E-value=4.8 Score=28.62 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCceEEEEec-CCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 65 ELFLKNAAQHRKFQCIVME-NSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 65 ~~~L~~A~~~~~f~ViV~E-s~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...|..+.+ .+|.++++| .-|...|.++++.|++.++|+.+++-
T Consensus 43 ~eAl~~~~~-~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 43 QEALDIARK-GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHH-CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHHh-CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 334443333 567888877 67999999999999999999877653
No 241
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=64.65 E-value=17 Score=26.52 Aligned_cols=61 Identities=13% Similarity=0.101 Sum_probs=36.7
Q ss_pred HHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 93 LAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
++..|...|+++..+.|.. ...+.+=|.+|+-+ ..|.- .-+..++..||+.+.|++.++..
T Consensus 55 ~~~~l~~~g~~~~~~~~~~-~~~~~~~d~vI~iS----~sG~t---~~~~~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 55 FAMRLMHMGFNAHIVGEIL-TPPLAEGDLVIIGS----GSGET---KSLIHTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp HHHHHHHTTCCEEETTSTT-CCCCCTTCEEEEEC----SSSCC---HHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHhcCCeEEEeCccc-ccCCCCCCEEEEEc----CCCCc---HHHHHHHHHHHHCCCEEEEEECC
Confidence 4555556677776666552 12233445444322 23322 34677889999999999988753
No 242
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=64.54 E-value=39 Score=29.47 Aligned_cols=97 Identities=16% Similarity=0.062 Sum_probs=58.3
Q ss_pred HHHHhcccCCCCEEEEec---CCHHHHHHHHHHHh-CCceEEEEecC-C------C----------CChHHHHHHHHhhc
Q psy2575 42 PSQACEHIHSNEIILTLG---YSKIVELFLKNAAQ-HRKFQCIVMEN-S------P----------ENKGHELAVSLAKS 100 (165)
Q Consensus 42 a~~a~~~I~~~~~ILT~g---~S~tV~~~L~~A~~-~~~f~ViV~Es-~------P----------~~eG~~la~~L~~~ 100 (165)
++.|.++|++|++|..++ +...+...|....+ -++++++-.=+ . | .+-|..+.+..++-
T Consensus 14 aeeA~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~l~~v~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~G 93 (448)
T 3gk7_A 14 ADEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPSTRGSIAEG 93 (448)
T ss_dssp HHHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTTTHHHHHHT
T ss_pred HHHHHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHhhcCeEEEEeeccCCccccChHHhCcEEEecCcCCHHHHhHHhCC
Confidence 355677999999999975 34455554443332 35677765411 1 1 12223333333332
Q ss_pred CCceEEEccchHHHhchh----CCEEEEccceeecCCCeeeh
Q psy2575 101 KIQTVLIPDSAMFGLISR----VNKIIIGTHTVMANGGLRSV 138 (165)
Q Consensus 101 GI~v~~I~dsav~~~m~~----v~~VllGAd~V~~nG~vvnk 138 (165)
.++..-+-.+.+..++.+ +|.+++.+...-.+|.+.-.
T Consensus 94 ~~~~~p~~ls~~p~~~~~g~~~~DVAli~as~~D~~Gn~s~g 135 (448)
T 3gk7_A 94 HGQFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCVG 135 (448)
T ss_dssp SSEECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEECC
T ss_pred CeeEECchHHhHHHHHHhCCCCCCEEEEEEecCCCCCcEEec
Confidence 244434456777777763 89999999999999988643
No 243
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=64.42 E-value=16 Score=28.43 Aligned_cols=24 Identities=8% Similarity=-0.032 Sum_probs=19.4
Q ss_pred ehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 137 SVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 137 nk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|-.|+..+.-+|+..+++-+|...
T Consensus 95 n~~~~~~ll~a~~~~~v~~~v~~S 118 (321)
T 3vps_A 95 NVDSGRHLLALCTSVGVPKVVVGS 118 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEec
Confidence 677999999999999977666544
No 244
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=64.37 E-value=48 Score=25.76 Aligned_cols=98 Identities=8% Similarity=-0.106 Sum_probs=52.0
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHH-HHHH-HhhcCCceEEEcc---chHHHhch-hCCEEEEcc
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHE-LAVS-LAKSKIQTVLIPD---SAMFGLIS-RVNKIIIGT 126 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~-la~~-L~~~GI~v~~I~d---sav~~~m~-~v~~VllGA 126 (165)
+.|++.+.+..+...+.... ++.-+|++. .|.+.+.. .... +...|+++..++. ..+...+. +...|++ .
T Consensus 15 ~~i~~~sG~~a~~~~~~~~~-~~g~~v~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~-~ 90 (331)
T 1pff_A 15 ACAATASGMGAIAASVWTFL-KAGDHLISD--DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYF-E 90 (331)
T ss_dssp EEEEESSHHHHHHHHHHHHC-CTTCEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEE-E
T ss_pred eEEEeCChHHHHHHHHHHhc-CCCCEEEEc--CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEE-E
Confidence 55555444444444444332 334566666 35565532 2333 4557888888763 23333443 2333333 2
Q ss_pred ceeecCCCeeehhcHHHHHHHHhh-CCCcEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQH-YSIPYPC 157 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V 157 (165)
..-.+.|.+.. -..++-+|++ +++++++
T Consensus 91 ~~~nptG~~~~---~~~i~~~~~~~~~~~li~ 119 (331)
T 1pff_A 91 TPANPTLKVID---IEDAVKQARKQKDILVIV 119 (331)
T ss_dssp SSCTTTCCCCC---HHHHHHHHTTSSSCEEEE
T ss_pred CCCCCcCcccC---HHHHHHHHhhhcCCEEEE
Confidence 22233455443 4568888999 9998876
No 245
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=64.15 E-value=27 Score=27.32 Aligned_cols=71 Identities=17% Similarity=0.216 Sum_probs=44.9
Q ss_pred EEEEecCCHHHHHHHHHHHhC-CceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc-----chHHHhchh--CCEEEE
Q psy2575 54 IILTLGYSKIVELFLKNAAQH-RKFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD-----SAMFGLISR--VNKIII 124 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~-~~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d-----sav~~~m~~--v~~Vll 124 (165)
.||.-|..+..+.+|....++ -+.+|. |+-.+|...|.+.|+ ++|||+..++. ..+...+++ +|.+++
T Consensus 12 ~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~---~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivl 88 (215)
T 3kcq_A 12 GVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQ---SYGIPTFVVKRKPLDIEHISTVLREHDVDLVCL 88 (215)
T ss_dssp EEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHH---HTTCCEEECCBTTBCHHHHHHHHHHTTCSEEEE
T ss_pred EEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHH---HcCCCEEEeCcccCChHHHHHHHHHhCCCEEEE
Confidence 456667777777777655443 235544 444577777765554 47999998753 455555654 788887
Q ss_pred ccc
Q psy2575 125 GTH 127 (165)
Q Consensus 125 GAd 127 (165)
..-
T Consensus 89 agy 91 (215)
T 3kcq_A 89 AGF 91 (215)
T ss_dssp SSC
T ss_pred eCC
Confidence 654
No 246
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=64.12 E-value=51 Score=25.91 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=54.3
Q ss_pred CEEEEecCCHHHHHHHHHHH---hCCceEEEEecCCCCChHH-HHHHHHhhcCCceEEEccc--------hHHHhchhCC
Q psy2575 53 EIILTLGYSKIVELFLKNAA---QHRKFQCIVMENSPENKGH-ELAVSLAKSKIQTVLIPDS--------AMFGLISRVN 120 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~---~~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~ds--------av~~~m~~v~ 120 (165)
.+++|-|.+..+...+.... .++.-+|++.+ |.+.+. ..++.+...|.++..++.. .+...+.+-.
T Consensus 62 ~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~ 139 (382)
T 4eb5_A 62 TVVFTSGATEANNLAIIGYAMRNARKGKHILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDT 139 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEET--TCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTE
T ss_pred eEEEcCchHHHHHHHHHHHHhhccCCCCEEEECC--CcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCC
Confidence 56666666655555555443 12334676663 444444 3345556689988888632 2223333222
Q ss_pred EEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 121 KIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 121 ~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++++-...-.+.|.+.. --.++-+|++++++ ++
T Consensus 140 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~ 172 (382)
T 4eb5_A 140 ILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HI 172 (382)
T ss_dssp EEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EE
T ss_pred eEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EE
Confidence 44444433334455544 25788889999887 54
No 247
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=63.85 E-value=42 Score=26.76 Aligned_cols=115 Identities=8% Similarity=0.093 Sum_probs=59.0
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCc-eEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~-f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds-- 110 (165)
....++.|++.- -+....+++|-|.+..+..++....+ +. -+|++. .|.+.+...+ +...|.++..++..
T Consensus 60 ~~~lr~~la~~~--~~~~~~v~~~~G~~~ai~~~~~~~~~-~g~d~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~~~~~ 132 (356)
T 1fg7_A 60 PKAVIENYAQYA--GVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYC--PPTYGMYSVS--AETIGVECRTVPTLDN 132 (356)
T ss_dssp CHHHHHHHHHHH--TSCGGGEEEESHHHHHHHHHHHHHCC-TTTCEEEEC--SSSCTHHHHH--HHHHTCEEEECCCCTT
T ss_pred HHHHHHHHHHHh--CCChHHEEEcCCHHHHHHHHHHHHhC-CCCCEEEEe--CCChHHHHHH--HHHcCCEEEEeeCCCC
Confidence 356677777654 12334677777766555555554432 33 466665 4777665443 34467777776532
Q ss_pred ------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+...|++ +..=.+.|.+...---..++-.|+ +++.+++
T Consensus 133 ~~~d~~~l~~~i~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~ 183 (356)
T 1fg7_A 133 WQLDLQGISDKLDGVKVVYV-CSPNNPTGQLINPQDFRTLLELTR-GKAIVVA 183 (356)
T ss_dssp SCCCHHHHHTSCTTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEE
T ss_pred CCCCHHHHHHHhcCCCEEEE-eCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEE
Confidence 11111222233444 222233455544333334555566 7877665
No 248
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=63.71 E-value=53 Score=26.71 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=67.6
Q ss_pred ChHHHHHHHHHHhcc------cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHh-hcCCceEE
Q psy2575 34 ANPTSDTAPSQACEH------IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLA-KSKIQTVL 106 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~------I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~ 106 (165)
....++.+++.-... +....+++|-|.+..+...+.... ++.-+|++. +|.+.+... .+. ..|+++..
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~-~~gd~Vl~~--~p~y~~~~~--~~~~~~g~~~~~ 159 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA-DPGDAFLVP--SPYYPAFNR--DLRWRTGVQLIP 159 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC-CTTCEEEEE--SSCCTTHHH--HTTTTTCCEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC-CCCCeEEEc--cCCCcchHH--HHHHhcCCEEEE
Confidence 356788888766433 445678888887766665555443 333467766 455655432 233 46888887
Q ss_pred Eccc----------hHHHhch-------hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 107 IPDS----------AMFGLIS-------RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 107 I~ds----------av~~~m~-------~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++.. .+...+. ++..|++ +..-.+.|.+..+-=-..++-.|+++++++++
T Consensus 160 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 160 IHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL-TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp ECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred eecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE-cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEE
Confidence 7632 1222332 2333444 22223345555443345677788999998876
No 249
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=63.70 E-value=41 Score=24.63 Aligned_cols=39 Identities=8% Similarity=-0.101 Sum_probs=25.8
Q ss_pred chhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 116 ISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 116 m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+.+=|.+++-+ ..| +..-+..++..||+.+.|++.++..
T Consensus 107 ~~~~DvvI~iS----~SG---~t~~~i~~~~~ak~~g~~vI~IT~~ 145 (196)
T 2yva_A 107 GHAGDVLLAIS----TRG---NSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_dssp CCTTCEEEEEC----SSS---CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCCEEEEEe----CCC---CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44556555432 224 2445677888999999999988754
No 250
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=63.68 E-value=30 Score=26.94 Aligned_cols=99 Identities=12% Similarity=0.047 Sum_probs=45.8
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchh--CCEEEEcccee
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISR--VNKIIIGTHTV 129 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~--v~~VllGAd~V 129 (165)
+.+||+.|.|.-+=..|......+..+|+++.-++...+ -+..-+....++..++.. +|.|+--|-..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 71 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK----------FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER 71 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC----------eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence 357888887766644343333334577887753332111 111111122334445554 67777555322
Q ss_pred ecC--------CCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 130 MAN--------GGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 130 ~~n--------G~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
..+ ---+|-.|+..++-+|+..++.++.++.
T Consensus 72 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 110 (315)
T 2ydy_A 72 RPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISS 110 (315)
T ss_dssp ----------------CHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEch
Confidence 111 1124778999999999988876655543
No 251
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=63.66 E-value=11 Score=34.99 Aligned_cols=45 Identities=22% Similarity=0.194 Sum_probs=27.1
Q ss_pred HHHHHHHHHHh-CCceEEEEecCCCCCh--HHHHHHHHhhcCCceEEE
Q psy2575 63 IVELFLKNAAQ-HRKFQCIVMENSPENK--GHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 63 tV~~~L~~A~~-~~~f~ViV~Es~P~~e--G~~la~~L~~~GI~v~~I 107 (165)
-+...|..|++ |++.+|+|--.....+ ....++.|.++|+.|.+-
T Consensus 385 ~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~g 432 (705)
T 2o8r_A 385 SIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIVYS 432 (705)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEEEc
Confidence 44444554554 7777776653332322 567788888888888763
No 252
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=63.64 E-value=54 Score=26.02 Aligned_cols=117 Identities=10% Similarity=0.001 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHhcc----cCCC-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEH----IHSN-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...++.+++...+. +... .+++|-|.+..+...+.... ++.-+|++. .|.+.+... .+...|.++..++.
T Consensus 66 ~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~--~p~y~~~~~--~~~~~g~~~~~~~~ 140 (376)
T 2dou_A 66 LPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALT-EPEDLLLLP--EVAYPSYFG--AARVASLRTFLIPL 140 (376)
T ss_dssp HHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHC-CTTCEEEEE--SSCCHHHHH--HHHHTTCEEEEECB
T ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhc-CCCCEEEEC--CCCcHhHHH--HHHHcCCEEEEeeC
Confidence 35577777655332 1223 67777776666655555443 334466665 466666543 34457888877763
Q ss_pred -c-------hHHHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 -S-------AMFGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 -s-------av~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. .+...+ ++...|++. ..-.+.|.+...-=-..++-.|+++++++++
T Consensus 141 ~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 141 REDGLADLKAVPEGVWREAKVLLLN-YPNNPTGAVADWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp CTTSSBCGGGSCHHHHHHEEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCHHHHHHhhccCceEEEEC-CCCCCcCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 111112 234445553 2223345444332234577889999998876
No 253
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=63.59 E-value=37 Score=27.22 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=15.6
Q ss_pred cHHHHHHHHhhCCCcEEEEe
Q psy2575 140 GTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 140 GT~~lAl~Ak~~~vPv~V~~ 159 (165)
=+.+++.+|+++++|+.+++
T Consensus 197 E~aa~a~vA~~~gi~~~~i~ 216 (283)
T 1cb0_A 197 TTVPEVVLAKEAGICYASIA 216 (283)
T ss_dssp SHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEE
Confidence 36778888888888888663
No 254
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=63.53 E-value=25 Score=31.21 Aligned_cols=116 Identities=10% Similarity=0.087 Sum_probs=66.5
Q ss_pred HHHHhcc--cCCCCEEEEecCCHHHH----HHHHHHHh-C-CceEEEEecCCCCC-------------------hHHHHH
Q psy2575 42 PSQACEH--IHSNEIILTLGYSKIVE----LFLKNAAQ-H-RKFQCIVMENSPEN-------------------KGHELA 94 (165)
Q Consensus 42 a~~a~~~--I~~~~~ILT~g~S~tV~----~~L~~A~~-~-~~f~ViV~Es~P~~-------------------eG~~la 94 (165)
++.|.++ |+||++|...++...=. .++....+ + ++++++-....+.. -|..+.
T Consensus 52 aeEAv~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r~~~~~~g~~~r 131 (519)
T 2hj0_A 52 IHEAIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSSGLRDKVG 131 (519)
T ss_dssp HHHHHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCHHHHH
T ss_pred HHHHHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEEEEecCCCcHHH
Confidence 4556667 99999999988764322 44544443 3 56777765222211 122222
Q ss_pred HHHhhcC---CceEEEccchHHHhch----hCCEEEEccceeecCCCeee---hh--cHHHHHHHHhhCCCcEEEE
Q psy2575 95 VSLAKSK---IQTVLIPDSAMFGLIS----RVNKIIIGTHTVMANGGLRS---VC--GTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 95 ~~L~~~G---I~v~~I~dsav~~~m~----~v~~VllGAd~V~~nG~vvn---k~--GT~~lAl~Ak~~~vPv~V~ 158 (165)
+ +-+.| +|+.|-......+++. .+|..++.+...-.+|.+.- +. ++...+.++.....-|++-
T Consensus 132 ~-~i~~G~~~~P~~l~~~gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~g~s~~~s~~~~~~~a~~A~~VIaE 206 (519)
T 2hj0_A 132 A-AISEGIMENPVIIRSHGGRARAIATDDIHIDVAFLGAPSSDAYGNANGTRGKTTCGSLGYAMIDAKYADQVVIV 206 (519)
T ss_dssp H-HHHTTCCSSCEEECCHHHHHHHHHHTSSCCSEEEEEESEECTTSCEESSSSSSCCSCCHHHHHHHHHCSEEEEE
T ss_pred H-HHHCCCCCCCceeeccCCHHHHHhcCCCCCcEEEEEecccCCCCcEEEecCccccccchhhHHHHhhCCEEEEE
Confidence 2 22334 4554432222555554 38999999999999999883 22 3445555555555555543
No 255
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=63.34 E-value=29 Score=23.75 Aligned_cols=78 Identities=6% Similarity=-0.025 Sum_probs=43.2
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-C
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-Y 151 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~ 151 (165)
+.+|+++|..|.. ...+...|.+.|+.+....+..-.. .+. ..|.+++..+. ++ ..|.-.+..+-+. .
T Consensus 3 ~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l--~~-----~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 3 APSVFLIDDDRDL-RKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRM--PG-----MDGLALFRKILALDP 74 (155)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCC--SS-----SCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhhCC
Confidence 4577777766642 2345667777888877665432222 222 36777776542 22 2233333333333 4
Q ss_pred CCcEEEEeec
Q psy2575 152 SIPYPCTFLL 161 (165)
Q Consensus 152 ~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 75 ~~pii~ls~~ 84 (155)
T 1qkk_A 75 DLPMILVTGH 84 (155)
T ss_dssp TSCEEEEECG
T ss_pred CCCEEEEECC
Confidence 7899988754
No 256
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=63.33 E-value=27 Score=25.67 Aligned_cols=81 Identities=7% Similarity=-0.058 Sum_probs=46.0
Q ss_pred EEEEecCCCCChHHHH----HHHHhh-cCCceEEEccchH-HHhchhCCEEEEccceeecCCCeeehhcHHHHHHHH---
Q psy2575 78 QCIVMENSPENKGHEL----AVSLAK-SKIQTVLIPDSAM-FGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAA--- 148 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~l----a~~L~~-~GI~v~~I~dsav-~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A--- 148 (165)
+|.++=.++...-+.+ ++.|.+ .|++++++..... ..-+.++|.+++|+=.. +|++-...=.+.=-+..
T Consensus 6 kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~~~~~l~~aD~ii~gsP~y--~g~~~~~lk~fld~~~~~~~ 83 (188)
T 2ark_A 6 KVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTN--MGLVSWKMKRFFDDVLGDLW 83 (188)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEEECB--TTBCCHHHHHHHHHTGGGTT
T ss_pred EEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhCCHHHHHhCCEEEEEeCcc--CCcCCHHHHHHHHHHhhhhH
Confidence 4444433455555555 444555 7888887765443 34567899999997554 66665544333222211
Q ss_pred -hhCCCcEEEEee
Q psy2575 149 -QHYSIPYPCTFL 160 (165)
Q Consensus 149 -k~~~vPv~V~~~ 160 (165)
+-.++|+.+++-
T Consensus 84 ~~l~gk~~~~~~t 96 (188)
T 2ark_A 84 GEIDGKIACAFSS 96 (188)
T ss_dssp TSCTTCEEEEEEE
T ss_pred HHhCCCeEEEEEE
Confidence 235688876654
No 257
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=63.06 E-value=35 Score=27.04 Aligned_cols=69 Identities=13% Similarity=0.074 Sum_probs=42.3
Q ss_pred cccCCCCEEEEec-CC--HHHHHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 47 EHIHSNEIILTLG-YS--KIVELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 47 ~~I~~~~~ILT~g-~S--~tV~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
+++..+..++..+ .. .....++..+.++++. |++....|.. -|..+++.|.+.||++++|| -|++.++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~G~~V-a~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaa 120 (264)
T 3ndc_A 46 AHCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDV-ARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAA 120 (264)
T ss_dssp GGSCTTCEEEECTTSCHHHHHHHHHHHHHHTCCE-EEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHH
T ss_pred hhcCCCCEEEecCCCCHHHHHHHHHHHHHCCCeE-EEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHH
Confidence 3455454444432 22 2334444555556664 4445788875 45788999999999999999 45554443
No 258
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=62.97 E-value=57 Score=26.07 Aligned_cols=101 Identities=11% Similarity=0.127 Sum_probs=52.8
Q ss_pred CCEEEEecCCHHHHHHHHHHH--hCCceEEEEecCCCCChHH-HHHHHHhh-cCCceEEEccc---------hHHHhchh
Q psy2575 52 NEIILTLGYSKIVELFLKNAA--QHRKFQCIVMENSPENKGH-ELAVSLAK-SKIQTVLIPDS---------AMFGLISR 118 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~--~~~~f~ViV~Es~P~~eG~-~la~~L~~-~GI~v~~I~ds---------av~~~m~~ 118 (165)
..+++|-|.+..+...+.... -++.-+|++.+ |.+.+. .....+.+ .|.++..++.. .+-..+.+
T Consensus 87 ~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~--~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~ 164 (406)
T 3cai_A 87 GGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSR--LDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK 164 (406)
T ss_dssp GGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEET--TSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT
T ss_pred CeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcC--CccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC
Confidence 467776666655444443321 13444677654 544442 22333333 58888877632 23333332
Q ss_pred CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 119 VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 119 v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
-.++++-...-.+.|.+.. -..++-+|+++++++++
T Consensus 165 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (406)
T 3cai_A 165 STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVV 200 (406)
T ss_dssp TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEE
T ss_pred CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 2233333333233454443 35788889999998876
No 259
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=62.80 E-value=12 Score=28.71 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=30.5
Q ss_pred ChHHHHHHHHhh--cCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 88 NKGHELAVSLAK--SKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 88 ~eG~~la~~L~~--~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
.+-...++.+++ .|.++..|++..-..+-+.+|.++.-.
T Consensus 120 ~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~ 160 (220)
T 3etn_A 120 REIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTG 160 (220)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEcC
Confidence 344566888888 999999999887777777789888643
No 260
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=62.78 E-value=7.2 Score=29.17 Aligned_cols=38 Identities=3% Similarity=-0.090 Sum_probs=29.4
Q ss_pred hHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 89 KGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 89 eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
+-.+.++.+++.|.++..|++..-..+-+.+|.++.-.
T Consensus 107 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 144 (201)
T 3fxa_A 107 ELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVS 144 (201)
T ss_dssp HHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcC
Confidence 33455788888899999999887777777889888644
No 261
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=62.43 E-value=44 Score=26.63 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=56.4
Q ss_pred HHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc---------h
Q psy2575 41 APSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS---------A 111 (165)
Q Consensus 41 Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds---------a 111 (165)
..+..++++.....++|-|.+..+...|..+.-++.-+|++.+ |.+.+. ...+...|.++..++.. .
T Consensus 40 l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~--~~~~~~--~~~~~~~G~~~~~~~~~~~~~~~d~~~ 115 (367)
T 3nyt_A 40 LEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPG--FTYVAT--AETVALLGAKPVYVDIDPRTYNLDPQL 115 (367)
T ss_dssp HHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES--SSCTHH--HHHHHHTTCEEEEECBCTTTCSBCGGG
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC--CccHHH--HHHHHHcCCEEEEEecCCccCCcCHHH
Confidence 3333344555456777766665555555544223445677664 444443 33355678888887632 1
Q ss_pred HHHhchhCCEEEEccceeecCCCeeehhcH----HHHHHHHhhCCCcEEEEe
Q psy2575 112 MFGLISRVNKIIIGTHTVMANGGLRSVCGT----HAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~nG~vvnk~GT----~~lAl~Ak~~~vPv~V~~ 159 (165)
+...+..=.++++ +.|..|+ ..++-+|+++++++++=+
T Consensus 116 l~~~i~~~~~~v~----------~~~~~G~~~~~~~i~~la~~~~~~li~D~ 157 (367)
T 3nyt_A 116 LEAAITPRTKAII----------PVSLYGQCADFDAINAIASKYGIPVIEDA 157 (367)
T ss_dssp TGGGCCTTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCCBEEEC
T ss_pred HHHhcCcCCcEEE----------eeCCccChhhHHHHHHHHHHcCCEEEEEC
Confidence 2222222123333 1233443 458888999999998733
No 262
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=62.42 E-value=60 Score=26.19 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=66.1
Q ss_pred ChHHHHHHHHHHhcc----cCCC-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH----IHSN-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++...+. +... ++++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..+...|.++..++
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~-~gd~Vl~~~--~~y~~~~--~~~~~~g~~~~~v~ 138 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVE-PGSEVLLIE--PFYDSYS--PVVAMAGAHRVTVP 138 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHH--HHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcC-CCCEEEEeC--CCcHhHH--HHHHHcCCEEEEee
Confidence 356788888876543 2344 788888877776666665533 344677654 4444433 33456787776665
Q ss_pred cc-----------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DS-----------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 ds-----------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. .+...+. +...|++. ..-.+.|.+...-=-..++-+|+++++++++
T Consensus 139 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 139 LVPDGRGFALDADALRRAVTPRTRALIIN-SPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp CEEETTEEECCHHHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCCCCHHHHHHhhccCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 21 2222332 23333332 2222344443322225678889999998876
No 263
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=62.39 E-value=16 Score=29.02 Aligned_cols=106 Identities=14% Similarity=0.023 Sum_probs=49.2
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeec
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMA 131 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~ 131 (165)
+.+||+.|.+.-+=..|......+..+|+++...+...-..+ ..+.. .-++.++........+.++|.|+--|-....
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~d~vih~A~~~~~ 104 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHWIG-HENFELINHDVVEPLYIEVDQIYHLASPASP 104 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGGTT-CTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhh-hhhcc-CCceEEEeCccCChhhcCCCEEEECccccCc
Confidence 567888887665533333222223467777754432211111 11111 1123333221111223445554433321100
Q ss_pred C---C-----CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 132 N---G-----GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 132 n---G-----~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
. . --+|-.|+..+.-+|+..++.++.+.
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 140 (343)
T 2b69_A 105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 140 (343)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEEC
Confidence 0 0 01466789999999998887666554
No 264
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=62.39 E-value=59 Score=26.05 Aligned_cols=119 Identities=13% Similarity=0.033 Sum_probs=65.9
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.|+++-... +...++++|-|.+..+...+....+ +.-+|++.+ |.+.+. ...+...|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~Vlv~~--p~y~~~--~~~~~~~g~~~~~v~~ 144 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS--PYWVSY--PEMVRFAGGVVVEVET 144 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTHH--HHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcC-CCCEEEEcC--CCchhH--HHHHHHcCCEEEEeec
Confidence 467788888876442 3345677777766665555554433 334676664 455443 3344467888777764
Q ss_pred ch----------HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA----------MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa----------v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +...+.+-.++++=+..--+.|.+....=-..++-.|+++++++++
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp CGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 21 1122222123332222222345555444446788889999988775
No 265
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=62.37 E-value=29 Score=23.88 Aligned_cols=79 Identities=20% Similarity=0.192 Sum_probs=42.7
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH- 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~- 150 (165)
++.+|+++|..|.. ...+.+.|.+.|..+....+..-.. .+. ..|.||+..+- +++ -|.-.+..+-+.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~~-----~g~~~~~~lr~~~ 77 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ-AEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLM--PEM-----DGYALCRWLKGQP 77 (154)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCC--SSS-----CHHHHHHHHHHST
T ss_pred CCCcEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCC--CCC-----CHHHHHHHHHhCC
Confidence 45677777766542 2345666777777776665433222 222 36777776542 221 233333333332
Q ss_pred --CCCcEEEEeec
Q psy2575 151 --YSIPYPCTFLL 161 (165)
Q Consensus 151 --~~vPv~V~~~~ 161 (165)
.++|+++++..
T Consensus 78 ~~~~~pii~~s~~ 90 (154)
T 3gt7_A 78 DLRTIPVILLTIL 90 (154)
T ss_dssp TTTTSCEEEEECC
T ss_pred CcCCCCEEEEECC
Confidence 47899988753
No 266
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.26 E-value=33 Score=24.56 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=54.9
Q ss_pred CEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--c-chHHHhchhCCEEEEccce
Q psy2575 53 EIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--D-SAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 53 ~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--d-sav~~~m~~v~~VllGAd~ 128 (165)
.+|++.|.|.-+=. +.....+ +..+|+++..+|... ..+...++.+.... | ..+..+++.+|.|+--+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-AGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 57888888766633 3333333 346777775544311 00112333332221 1 3455667778877755422
Q ss_pred eec-CCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 129 VMA-NGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 129 V~~-nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
... +-.-+|..|+..+.-+|+..+++-+|..
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCccchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 111 1122466789999999998887655543
No 267
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=62.22 E-value=17 Score=28.62 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=50.7
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHH-HHHHHHHHHhCCceEEEEecCCCCChHHHHHHH-HhhcC--CceEEEccchHH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKI-VELFLKNAAQHRKFQCIVMENSPENKGHELAVS-LAKSK--IQTVLIPDSAMF 113 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~t-V~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~-L~~~G--I~v~~I~dsav~ 113 (165)
.+.|+..+..++++|.+||=+|.+.- ....|......+..+|+-+|-.|.. .+.|++ +.+.| .+++++......
T Consensus 57 ~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~m--l~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 57 ISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAM--IERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHH--HHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHH--HHHHHHHHHhhccCceEEEeeccccc
Confidence 34566677788999999999998853 2222322222356789988877642 223443 44444 467877655443
Q ss_pred HhchhCCEEEE
Q psy2575 114 GLISRVNKIII 124 (165)
Q Consensus 114 ~~m~~v~~Vll 124 (165)
.-.++.|.|+.
T Consensus 135 ~~~~~~d~v~~ 145 (261)
T 4gek_A 135 IAIENASMVVL 145 (261)
T ss_dssp CCCCSEEEEEE
T ss_pred cccccccccee
Confidence 33455555543
No 268
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=62.17 E-value=21 Score=31.30 Aligned_cols=105 Identities=11% Similarity=0.067 Sum_probs=65.4
Q ss_pred cCChHHHHHH--HHHHhcccCCCCEEEEecCC---HHHHHHHHHHHh---CCceEEEEecC---------C---------
Q psy2575 32 DFANPTSDTA--PSQACEHIHSNEIILTLGYS---KIVELFLKNAAQ---HRKFQCIVMEN---------S--------- 85 (165)
Q Consensus 32 d~~~~~~~~I--a~~a~~~I~~~~~ILT~g~S---~tV~~~L~~A~~---~~~f~ViV~Es---------~--------- 85 (165)
++.+..++++ ++.|.++|++|++|.+-|+. ..+...|.+..+ -++++++-.-+ +
T Consensus 17 ~~~~~y~~K~vsaeEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~~~~~G~~~~~~~~~~~~~~~~~ 96 (455)
T 3qli_A 17 DIRALYDEKLTTPEEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYYFETAKIAGDTILRYELNNRIKP 96 (455)
T ss_dssp CHHHHHHHHBCCHHHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEESSCCHHHHHTTTCGGGTTTEEE
T ss_pred CHHHHHHhcCCCHHHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEEecccccchhhhhChhhcCcEEE
Confidence 3434444443 57788999999999997654 344444443322 25677764211 1
Q ss_pred -CCChHHHHHHHHhhcC--------CceEEEccchHHHhch---hCCEEEEccceeecCCCeee
Q psy2575 86 -PENKGHELAVSLAKSK--------IQTVLIPDSAMFGLIS---RVNKIIIGTHTVMANGGLRS 137 (165)
Q Consensus 86 -P~~eG~~la~~L~~~G--------I~v~~I~dsav~~~m~---~v~~VllGAd~V~~nG~vvn 137 (165)
|.+.|.. .|++.+.| ++..-+-.|.+..+++ ++|.+++.+...-.+|.+.-
T Consensus 97 ~~~f~~~~-~R~~i~~G~~~~~~~~~~y~p~~ls~~p~~~~~~~~iDVAli~vs~~D~~G~~s~ 159 (455)
T 3qli_A 97 YSMFVTAV-ERALIRRGIEDGGRKVVNYVPSNFHQAPRLLAEEIGIDTFMHTVSPMDCHGYFSL 159 (455)
T ss_dssp EESSCCHH-HHHHHHHHHHTTTCCCCCCCCCCGGGHHHHHHTTTCCSEEEEEECCCCTTSEEEC
T ss_pred eeCcCChh-HHHHHhCCCcccCcCcEEEECccHHHHHHHHHhcCCCCEEEEEEecCCCCceEEE
Confidence 2334433 45555555 4444555778887774 48999999999888887764
No 269
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=61.94 E-value=42 Score=27.64 Aligned_cols=108 Identities=17% Similarity=0.051 Sum_probs=54.6
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCCh--HHHHHHHHhh-----------cCCceEEEcc---chHHHh
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENK--GHELAVSLAK-----------SKIQTVLIPD---SAMFGL 115 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~e--G~~la~~L~~-----------~GI~v~~I~d---sav~~~ 115 (165)
+.+||+.|.+..+=..|.........+|+++.-++... -..+...|.+ .++.+..... ..+. .
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 147 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 147 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence 45899998876664444444444668888886555421 1233333332 2333332221 1122 3
Q ss_pred chhCCEEEEccceeecC-----CCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 116 ISRVNKIIIGTHTVMAN-----GGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 116 m~~v~~VllGAd~V~~n-----G~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+.++|.|+--|-.+-.. .--+|-.|+..++-+|+....+|+.+..
T Consensus 148 ~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS 197 (427)
T 4f6c_A 148 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVST 197 (427)
T ss_dssp SSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECc
Confidence 34444444332111000 0013778999999999985455555443
No 270
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=61.94 E-value=16 Score=27.19 Aligned_cols=74 Identities=8% Similarity=-0.019 Sum_probs=41.6
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeee----hhcHHHHHHHHhhCCC
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRS----VCGTHAVALAAQHYSI 153 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvn----k~GT~~lAl~Ak~~~v 153 (165)
+|.|++-...+. ...+.|++.|+++.+++... -+.++|.++++--. +.... ..+...+...+...++
T Consensus 3 ~I~il~~~~~~~--~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~GG~----~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (196)
T 2nv0_A 3 TIGVLGLQGAVR--EHIHAIEACGAAGLVVKRPE---QLNEVDGLILPGGE----STTMRRLIDTYQFMEPLREFAAQGK 73 (196)
T ss_dssp EEEEECSSSCCH--HHHHHHHHTTCEEEEECSGG---GGGGCSEEEECCSC----HHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred EEEEEEccCCcH--HHHHHHHHCCCEEEEeCChH---HHhhCCEEEECCCC----hhhHHHHhhhHHHHHHHHHHHHCCC
Confidence 566666422222 34588889999998887532 25678877775311 00111 1222233334446789
Q ss_pred cEEEEee
Q psy2575 154 PYPCTFL 160 (165)
Q Consensus 154 Pv~V~~~ 160 (165)
|++-+|-
T Consensus 74 pilgIC~ 80 (196)
T 2nv0_A 74 PMFGTCA 80 (196)
T ss_dssp CEEEETH
T ss_pred cEEEECH
Confidence 9998773
No 271
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=61.77 E-value=61 Score=26.01 Aligned_cols=118 Identities=10% Similarity=0.041 Sum_probs=65.9
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
....++.+++...+. +....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 80 ~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~-~~gd~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~ 154 (389)
T 1o4s_A 80 IYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL-DPGDEVIVFS--PVWVSYI--PQIILAGGTVNVVET 154 (389)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEE--SCCTTHH--HHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC-CCCCEEEEcC--CCchhHH--HHHHHcCCEEEEEec
Confidence 356788888766432 244567777776666666665443 3334676664 4444433 334557888877763
Q ss_pred ch----------HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA----------MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa----------v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +...+. +...|++ ...-.+.|.+....=-..++-+|+++++++++
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVGKTKAVLI-NSPNNPTGVVYRREFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCTTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCccCCCCCHHHHHHhcccCceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 21 122222 2333333 22222345554444345678889999998876
No 272
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=61.71 E-value=12 Score=28.28 Aligned_cols=46 Identities=2% Similarity=-0.069 Sum_probs=32.6
Q ss_pred EEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEE
Q psy2575 79 CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIII 124 (165)
Q Consensus 79 ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~Vll 124 (165)
+.+.-|....+-.+.++.+++.|.++..|++..-..+-+.+|.+|.
T Consensus 136 I~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 136 LGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 3344444344556678888889999999998766666677888876
No 273
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=61.69 E-value=9 Score=28.85 Aligned_cols=88 Identities=10% Similarity=0.103 Sum_probs=51.5
Q ss_pred HHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEE
Q psy2575 43 SQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKI 122 (165)
Q Consensus 43 ~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~V 122 (165)
+.+.+.|.+...|..+|.+..-. + +..++.+|...|+++..+.|... ..+.+=|.+
T Consensus 38 ~~~~~~i~~a~~I~i~G~G~S~~--~---------------------A~~~~~~l~~~g~~~~~~~~~~~-~~~~~~Dvv 93 (200)
T 1vim_A 38 GEMIKLIDSARSIFVIGAGRSGY--I---------------------AKAFAMRLMHLGYTVYVVGETVT-PRITDQDVL 93 (200)
T ss_dssp HHHHHHHHHSSCEEEECSHHHHH--H---------------------HHHHHHHHHHTTCCEEETTSTTC-CCCCTTCEE
T ss_pred HHHHHHHhcCCEEEEEEecHHHH--H---------------------HHHHHHHHHhcCCeEEEeCCccc-cCCCCCCEE
Confidence 34445566667787777654311 1 12355666677888777766421 223344544
Q ss_pred EEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 123 IIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 123 llGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
|+-+ ..| ...-+..++..||+.+.|++.++..
T Consensus 94 I~iS----~SG---~t~~~i~~~~~ak~~g~~vI~IT~~ 125 (200)
T 1vim_A 94 VGIS----GSG---ETTSVVNISKKAKDIGSKLVAVTGK 125 (200)
T ss_dssp EEEC----SSS---CCHHHHHHHHHHHHHTCEEEEEESC
T ss_pred EEEe----CCC---CcHHHHHHHHHHHHCCCeEEEEECC
Confidence 4322 223 2234667888999999999988753
No 274
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=61.61 E-value=29 Score=23.36 Aligned_cols=80 Identities=9% Similarity=0.055 Sum_probs=47.0
Q ss_pred CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHh-
Q psy2575 74 HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ- 149 (165)
Q Consensus 74 ~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak- 149 (165)
.+..+|+++|..|.. ...+...|.+.|+.|....+..-. ..+. ..|.+|+..+. ++ .-|--.+..+-+
T Consensus 6 ~~~~~iLivd~~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~ 77 (147)
T 2zay_A 6 GKWWRIMLVDTQLPA-LAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANM--PK-----ISGMDLFNSLKKN 77 (147)
T ss_dssp --CEEEEEECTTGGG-GHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCC--CC-----CCHHHHHHHHHcC
Confidence 356788888877753 345677788888888766543322 2222 37888887543 22 123333334433
Q ss_pred --hCCCcEEEEeec
Q psy2575 150 --HYSIPYPCTFLL 161 (165)
Q Consensus 150 --~~~vPv~V~~~~ 161 (165)
..++|+++++..
T Consensus 78 ~~~~~~pii~ls~~ 91 (147)
T 2zay_A 78 PQTASIPVIALSGR 91 (147)
T ss_dssp TTTTTSCEEEEESS
T ss_pred cccCCCCEEEEeCC
Confidence 357999988754
No 275
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=61.31 E-value=39 Score=26.37 Aligned_cols=71 Identities=10% Similarity=0.178 Sum_probs=42.2
Q ss_pred EEEEecCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhch--hC
Q psy2575 54 IILTLGYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLIS--RV 119 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~--~v 119 (165)
.||.-|.+++++.++...+++. +.+|. |+-.+|...+.+.|+ +.|||+..+.. ..+...++ ++
T Consensus 6 avl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~---~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~ 82 (211)
T 3p9x_A 6 AIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVK---VHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQI 82 (211)
T ss_dssp EEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHH---TTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHH---HcCCCEEEeChhhcCchhhhHHHHHHHHHhcCC
Confidence 3555677778777777655532 23332 333567665555554 47999988763 23444554 38
Q ss_pred CEEEEccc
Q psy2575 120 NKIIIGTH 127 (165)
Q Consensus 120 ~~VllGAd 127 (165)
|.+++.+-
T Consensus 83 Dliv~agy 90 (211)
T 3p9x_A 83 DFVVLAGY 90 (211)
T ss_dssp CEEEESSC
T ss_pred CEEEEeCc
Confidence 88887654
No 276
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=61.24 E-value=15 Score=26.55 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=45.4
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhh-CCC
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-YSI 153 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~~v 153 (165)
+..+|+++|..|.. ...+...|...|+.+....+..- ..-...|.|++..+ +++. -|. ....+.+. ..+
T Consensus 11 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~-al~~~~dlvl~D~~--mp~~-----~g~-l~~~~~~~~~~~ 80 (196)
T 1qo0_D 11 RELQVLVLNPPGEV-SDALVLQLIRIGCSVRQCWPPPE-AFDVPVDVVFTSIF--QNRH-----HDE-IAALLAAGTPRT 80 (196)
T ss_dssp GGCEEEEESCTTHH-HHHHHHHHHHHTCEEEEECSCCS-SCSSCCSEEEEECC--SSTH-----HHH-HHHHHHHSCTTC
T ss_pred cCCeEEEEcCChhH-HHHHHHHHHHcCCeEEEecCchh-hCCCCCCEEEEeCC--CCcc-----chH-HHHHHhccCCCC
Confidence 45688888887753 23456667778888877665442 11234677777543 2321 144 33333333 579
Q ss_pred cEEEEeec
Q psy2575 154 PYPCTFLL 161 (165)
Q Consensus 154 Pv~V~~~~ 161 (165)
|+++++..
T Consensus 81 ~ii~lt~~ 88 (196)
T 1qo0_D 81 TLVALVEY 88 (196)
T ss_dssp EEEEEECC
T ss_pred CEEEEEcC
Confidence 99988754
No 277
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=61.15 E-value=60 Score=25.75 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=54.7
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--------chHHHhch--hCCEEE
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--------SAMFGLIS--RVNKII 123 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--------sav~~~m~--~v~~Vl 123 (165)
+++|-|.+..+...+....+ +.-+|++.+ |.+.+......+...|.++..++. ..+...+. +...|+
T Consensus 72 v~~~~g~t~al~~~~~~~~~-~gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~ 148 (396)
T 2ch1_A 72 MCVSGSAHAGMEAMLSNLLE-EGDRVLIAV--NGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLF 148 (396)
T ss_dssp EEESSCHHHHHHHHHHHHCC-TTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEE
T ss_pred EEECCcHHHHHHHHHHHhcC-CCCeEEEEc--CCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEE
Confidence 55555555555555554433 334666664 555555444455667888887762 12333333 355555
Q ss_pred EccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 124 IGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 124 lGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+ ...-.+.|.+.. --.++-+|+++++++++
T Consensus 149 ~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 178 (396)
T 2ch1_A 149 L-THGDSSSGLLQP---LEGVGQICHQHDCLLIV 178 (396)
T ss_dssp E-ESEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred E-ECCCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 5 333344555554 24577888999988776
No 278
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=61.14 E-value=57 Score=26.08 Aligned_cols=109 Identities=14% Similarity=0.033 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc-----
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS----- 110 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds----- 110 (165)
..++.+++ ++...+.|+|-|.+..+...+..+.-++.-+|++. .|.+.+.. ..+...|.++..++..
T Consensus 60 ~l~~~la~----~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~ 131 (391)
T 3dr4_A 60 EFEKAFAD----YCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVP--SLTYIASA--NSVTYCGATPVLVDNDPRTFN 131 (391)
T ss_dssp HHHHHHHH----HHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEE--SSSCTHHH--HHHHHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHH----HhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEEC--CCchHHHH--HHHHHCCCEEEEEecCccccC
Confidence 34444444 45545677776666565556655512344467766 35555543 3345678888877633
Q ss_pred ----hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 111 ----AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 111 ----av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.+...+..-.++++-. -+.|.+ .. --.++-+|+++++++++=
T Consensus 132 ~d~~~l~~~~~~~~~~v~~~---n~tG~~-~~--~~~i~~l~~~~~~~li~D 177 (391)
T 3dr4_A 132 LDAAKLEALITPRTKAIMPV---HLYGQI-CD--MDPILEVARRHNLLVIED 177 (391)
T ss_dssp BCGGGSGGGCCTTEEEECCB---CGGGCC-CC--HHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhcCCCceEEEEE---CCCCCh-hh--HHHHHHHHHHcCCEEEEE
Confidence 1112222212233211 122322 11 245888899999998873
No 279
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=61.14 E-value=33 Score=29.21 Aligned_cols=117 Identities=7% Similarity=-0.025 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHhcccCCCCEEE---EecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHH--------HHHhhcCC
Q psy2575 35 NPTSDTAPSQACEHIHSNEIIL---TLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELA--------VSLAKSKI 102 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~IL---T~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la--------~~L~~~GI 102 (165)
...++.+-+..++++.....++ +.|.+..+...+... -++.-+|++.+ .|.+.|. .+. ..+...|+
T Consensus 73 ~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~al-l~pGD~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~ 150 (427)
T 3hvy_A 73 DIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGN-LRPNDTMMSIC-GMPYDTLHDIIGMDDSKKVGSLREYGV 150 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHT-CCTTCEEEECS-SSCCGGGHHHHTCCTTCCSCCTGGGTC
T ss_pred chhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHh-cCCCCEEEEeC-CCCchhHHHHhccccchhhhHHHHcCC
Confidence 3445666666666666555555 444444433333322 23455676665 3444443 344 45677899
Q ss_pred ceEEEcc-------chHHHhch---hCCEEEEccceeecCCCeeehhcH----HHHHHHHhh--CCCcEEE
Q psy2575 103 QTVLIPD-------SAMFGLIS---RVNKIIIGTHTVMANGGLRSVCGT----HAVALAAQH--YSIPYPC 157 (165)
Q Consensus 103 ~v~~I~d-------sav~~~m~---~v~~VllGAd~V~~nG~vvnk~GT----~~lAl~Ak~--~~vPv~V 157 (165)
.+..++. ..+...+. +...|++.... |..-|..|+ ..++-+|++ ++++++|
T Consensus 151 ~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~----gyp~nptg~v~dl~~i~~ia~~~~~g~~liv 217 (427)
T 3hvy_A 151 KYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRST----GYGWRKSLRIAEIAEIIKSIREVNENVIVFV 217 (427)
T ss_dssp EEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSC----CSSSSCCCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCC----CCCCCccccHHHHHHHHHHHHHhCCCCEEEE
Confidence 8888764 34444454 34455555432 113333333 457788888 8988886
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=61.08 E-value=21 Score=33.42 Aligned_cols=86 Identities=13% Similarity=0.061 Sum_probs=50.0
Q ss_pred HHHHHHHHhcccCC---CCEEEEecCCHHHH--HHHHHHHh-C---------CceEEEEecCCCCChHHHHHHHHhhcCC
Q psy2575 38 SDTAPSQACEHIHS---NEIILTLGYSKIVE--LFLKNAAQ-H---------RKFQCIVMENSPENKGHELAVSLAKSKI 102 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~---~~~ILT~g~S~tV~--~~L~~A~~-~---------~~f~ViV~Es~P~~eG~~la~~L~~~GI 102 (165)
++.|.++..+++.+ +.+||..|.++-.+ ..+..++. + +..+||.+|..|.-.-....+.....+=
T Consensus 393 ~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d 472 (745)
T 3ua3_A 393 GEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKR 472 (745)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCC
Confidence 45555554566543 45888888776443 34544432 4 5789999999885332111111122333
Q ss_pred ceEEEccchHHHhc-------hhCCEEE
Q psy2575 103 QTVLIPDSAMFGLI-------SRVNKII 123 (165)
Q Consensus 103 ~v~~I~dsav~~~m-------~~v~~Vl 123 (165)
.|++|...+-..-+ .+||.++
T Consensus 473 ~VtVI~gd~eev~lp~~~~~~ekVDIIV 500 (745)
T 3ua3_A 473 RVTIIESDMRSLPGIAKDRGFEQPDIIV 500 (745)
T ss_dssp CSEEEESCGGGHHHHHHHTTCCCCSEEE
T ss_pred eEEEEeCchhhcccccccCCCCcccEEE
Confidence 58888755554444 5798887
No 281
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=60.83 E-value=64 Score=25.94 Aligned_cols=116 Identities=9% Similarity=0.051 Sum_probs=60.7
Q ss_pred HHHHHHHHHhcccCCCCEEEE-ecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCC--ceEEEcc----
Q psy2575 37 TSDTAPSQACEHIHSNEIILT-LGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKI--QTVLIPD---- 109 (165)
Q Consensus 37 ~~~~Ia~~a~~~I~~~~~ILT-~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI--~v~~I~d---- 109 (165)
..+++.+...+++...+.|+. -|.+..+...+. ..+ +.-+|++.+ |.+.|..+...+...|+ ++..++.
T Consensus 36 ~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~-~~~-~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 36 VMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVAR-QLT-IDEDCLIIR--NGWFSYRWTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHC-TTCEEEEEE--CSHHHHHHHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHH-hCC-CCCeEEEEe--CCchhHHHHHHHHHhCCCCceEEEeccccc
Confidence 445555555556644344444 444445555543 333 445777775 45556655555555664 4555431
Q ss_pred -------------chHHHhch--hCCEEEEccceeecCCCeeehhc-HHHHHHHHhhCCCcEEEE
Q psy2575 110 -------------SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCG-THAVALAAQHYSIPYPCT 158 (165)
Q Consensus 110 -------------sav~~~m~--~v~~VllGAd~V~~nG~vvnk~G-T~~lAl~Ak~~~vPv~V~ 158 (165)
..+...+. +...|++ ...=...| .+...+ -..++-+|+++++++++=
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~~~G-~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYA-PHVETSSG-IILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHHHTCSEEEE-ESEETTTT-EECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCCCCCHHHHHHHHhhcCCcEEEE-EeecCCCc-eeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 23444442 3444443 11112234 444433 345788899999998863
No 282
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=60.77 E-value=22 Score=28.00 Aligned_cols=21 Identities=5% Similarity=0.093 Sum_probs=11.0
Q ss_pred hHHHHHHHHhhcCCceEEEcc
Q psy2575 89 KGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 89 eG~~la~~L~~~GI~v~~I~d 109 (165)
.|+.+++.+.+.|+++..+..
T Consensus 12 ~~~~l~~a~~~~G~~v~~~~~ 32 (334)
T 2r85_A 12 SALQILKGAKDEGFETIAFGS 32 (334)
T ss_dssp THHHHHHHHHHTTCCEEEESC
T ss_pred hHHHHHHHHHhCCCEEEEEEC
Confidence 445555555555555555443
No 283
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=60.71 E-value=16 Score=28.08 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=18.8
Q ss_pred eehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 136 RSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 136 vnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+|-.|+..+.-+|+..+++++.+..
T Consensus 82 ~n~~~~~~l~~~~~~~~~~~v~~SS 106 (287)
T 3sc6_A 82 INAIGARNVAVASQLVGAKLVYIST 106 (287)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEch
Confidence 4557889999999998888555443
No 284
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=60.70 E-value=62 Score=25.79 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhC---------CceEEEEecCCCCChHHHH-HHHHhhc-----
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQH---------RKFQCIVMENSPENKGHEL-AVSLAKS----- 100 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~---------~~f~ViV~Es~P~~eG~~l-a~~L~~~----- 100 (165)
...+++.+..+++.....+++|-|.+..+...+..+.+. .+-+|++.+ |.+.|... +..+...
T Consensus 78 ~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCE--DNFHGRTMGAVSMSSNEEYKR 155 (392)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TCCCCSSHHHHHTCSCTTTTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEc--CCcCCCCHhhhhccCChhhcc
Confidence 334455555555555556777777666666666544321 133666654 33333222 2222211
Q ss_pred -----CCceEEEcc---chHHHhch-hCCEEEEccceeecCCCeeehhc-HHHHHHHHhhCCCcEEE
Q psy2575 101 -----KIQTVLIPD---SAMFGLIS-RVNKIIIGTHTVMANGGLRSVCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 101 -----GI~v~~I~d---sav~~~m~-~v~~VllGAd~V~~nG~vvnk~G-T~~lAl~Ak~~~vPv~V 157 (165)
..++..++. ..+-..+. +...|++-. .-.+.|.+..... -..++-+|++|++++++
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 156 GFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp TCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 112444432 23334443 344444433 3334466665666 67788999999999886
No 285
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=60.54 E-value=62 Score=25.70 Aligned_cols=116 Identities=11% Similarity=0.107 Sum_probs=62.4
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc---
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--- 110 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--- 110 (165)
....++.+++..- ....++++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..++..|.++..++..
T Consensus 63 ~~~l~~~la~~~~--~~~~~v~~~~g~~~a~~~~~~~~~~-~gd~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~ 135 (381)
T 1v2d_A 63 LPALREALAEEFA--VEPESVVVTSGATEALYVLLQSLVG-PGDEVVVLE--PFFDVYL--PDAFLAGAKARLVRLDLTP 135 (381)
T ss_dssp CHHHHHHHHHHHT--SCGGGEEEESSHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEET
T ss_pred CHHHHHHHHHhcC--CChhhEEEcCChHHHHHHHHHHhCC-CCCEEEEcC--CCchhHH--HHHHHcCCEEEEEeCCCCC
Confidence 3556777776521 1234577777766666666655533 334666664 4444433 3355678887777632
Q ss_pred --------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 --------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 --------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-..+. +...|++. ..-.+.|.+...-=-..++-+|+++++++++
T Consensus 136 ~~~~~d~~~l~~~l~~~~~~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 136 EGFRLDLSALEKALTPRTRALLLN-TPMNPTGLVFGERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp TEEECCHHHHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCcCHHHHHHhcCcCCEEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 1222222 23333332 2222344444332235677889999998876
No 286
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=60.32 E-value=46 Score=27.44 Aligned_cols=110 Identities=8% Similarity=-0.046 Sum_probs=58.0
Q ss_pred HHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHH-HHHhhcCCceEEEccc---hHHH
Q psy2575 40 TAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELA-VSLAKSKIQTVLIPDS---AMFG 114 (165)
Q Consensus 40 ~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la-~~L~~~GI~v~~I~ds---av~~ 114 (165)
...+..++++...+.|++-+.+..+...+. .. ++.-+|++.+ |.+.|. ... ..+...|+++..++.. .+..
T Consensus 71 ~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~-~~gd~Vl~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ 146 (403)
T 3cog_A 71 CLEKAVAALDGAKYCLAFASGLAATVTITH-LL-KAGDQIICMD--DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEA 146 (403)
T ss_dssp HHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TS-CTTCEEEEES--SCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEeC--CCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHH
Confidence 333333444443355555444444444444 32 2334677664 666653 323 3346789999999743 2333
Q ss_pred hchh-CCEEEEccceeecCCCeeehhcHHHHHHHHhhCC-CcEEE
Q psy2575 115 LISR-VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYS-IPYPC 157 (165)
Q Consensus 115 ~m~~-v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V 157 (165)
.+.. ...|++ ...--+.|.+.. -..++-+|++++ +++++
T Consensus 147 ~i~~~t~~v~~-~~p~nptG~~~~---l~~i~~la~~~g~~~liv 187 (403)
T 3cog_A 147 AITPETKLVWI-ETPTNPTQKVID---IEGCAHIVHKHGDIILVV 187 (403)
T ss_dssp HCCTTEEEEEE-ESSCTTTCCCCC---HHHHHHHHTSSSCCEEEE
T ss_pred hcCcCCeEEEE-ECCCCCCCeeeC---HHHHHHHHHHcCCCEEEE
Confidence 3432 333333 222234455553 456888899999 87776
No 287
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=60.08 E-value=48 Score=25.32 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=42.2
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecC
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMAN 132 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~n 132 (165)
.+||+.|. .-+=..|..+...+.++|+++.-+|.. ...|...++.+.......+. +.++|.|+--|-.. ..
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~-~~ 76 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQ-----MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD-SG 76 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGG-----HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB-TT
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhh-----hhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc-cc
Confidence 35666664 344222322222234566666544322 22334455444333222222 45566555443211 11
Q ss_pred CCeeehhcHHHHHHHHhh--CCCcEEEEe
Q psy2575 133 GGLRSVCGTHAVALAAQH--YSIPYPCTF 159 (165)
Q Consensus 133 G~vvnk~GT~~lAl~Ak~--~~vPv~V~~ 159 (165)
....+..+.-+|+. .+++-+|..
T Consensus 77 ----~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 77 ----GDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp ----BCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred ----ccHHHHHHHHHHHhhcCCceEEEEe
Confidence 12335566666776 566655544
No 288
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=60.05 E-value=34 Score=22.50 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=37.1
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecC-CCCChHHHHHHHHhhc----CCceEEEccc
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMEN-SPENKGHELAVSLAKS----KIQTVLIPDS 110 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es-~P~~eG~~la~~L~~~----GI~v~~I~ds 110 (165)
.+-.+.+....... +....+ .++.++++|- -|...|.++++.|++. ++++.+++..
T Consensus 26 ~~~~v~~~~~~~~a---~~~l~~-~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 26 GEFDCTTAADGASG---LQQALA-HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp TTSEEEEESSHHHH---HHHHHH-SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCcEEEEECCHHHH---HHHHhc-CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 45556655544333 333333 4578888874 5788999999999985 5788777754
No 289
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=59.99 E-value=60 Score=25.36 Aligned_cols=111 Identities=9% Similarity=0.035 Sum_probs=58.1
Q ss_pred HHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc-------
Q psy2575 40 TAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS------- 110 (165)
Q Consensus 40 ~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds------- 110 (165)
...+..++++. ...+++|-|.+..+..++.... ++.-+|++.+ |.+.+. ...+...|.++..++..
T Consensus 55 ~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~~~d~ 129 (354)
T 3ly1_A 55 MLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA-SLEAQLVIPE--LTYGDG--EHFAKIAGMKVTKVKMLDNWAFDI 129 (354)
T ss_dssp HHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEES--SSCTHH--HHHHHHTTCEEEEECCCTTSCCCH
T ss_pred HHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh-CCCCeEEECC--CCchHH--HHHHHHcCCEEEEecCCCCCCCCH
Confidence 33333334443 4567777766656555555443 3444677664 555553 34455678888888743
Q ss_pred -hHHHhch---hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -AMFGLIS---RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -av~~~m~---~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+. +...|++ ...-.+.|.+...---..++-.| ++++++++
T Consensus 130 ~~l~~~l~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~ 178 (354)
T 3ly1_A 130 EGLKAAVAAYSGPSIVYL-VNPNNPTGTITPADVIEPWIASK-PANTMFIV 178 (354)
T ss_dssp HHHHHHHHTCSSCEEEEE-ESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEE
T ss_pred HHHHHHhccCCCCCEEEE-eCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEE
Confidence 3334443 4555555 33334455555443333333333 37776665
No 290
>2z5b_A Protein YPL144W, DMP1; proteasome, chaperone; 1.96A {Saccharomyces cerevisiae} PDB: 2z5c_A
Probab=59.98 E-value=4.1 Score=30.80 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=21.1
Q ss_pred hhcHHHHHHHHhhCCCcEEEEeecccC
Q psy2575 138 VCGTHAVALAAQHYSIPYPCTFLLNIG 164 (165)
Q Consensus 138 k~GT~~lAl~Ak~~~vPv~V~~~~~~~ 164 (165)
...+...=++||+++.|+||-|..+.+
T Consensus 98 D~a~rlAkiLarR~~~P~YVg~S~~~s 124 (151)
T 2z5b_A 98 DMARHMATIISERFNRPCYVTWSSLPS 124 (151)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCCeEEEeecccc
Confidence 445555559999999999999887653
No 291
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=59.97 E-value=32 Score=25.57 Aligned_cols=71 Identities=6% Similarity=-0.095 Sum_probs=40.9
Q ss_pred EEEEecCCCCChHHHHHHHHhhcC-----CceEEEccchHHHhchhCCEEEEccceeecCCCeeehh-------cHHHHH
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSK-----IQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVC-------GTHAVA 145 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~G-----I~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~-------GT~~lA 145 (165)
+|.|++- +...=..+.+.|++.| ++++++.+.. - .++|.+++.- |+..... |...+.
T Consensus 2 ~I~iid~-~~g~~~s~~~~l~~~G~~~~~~~~~~~~~~~---~-~~~dglilpG------~g~~~~~~~~l~~~~~~~~i 70 (201)
T 1gpw_B 2 RIGIISV-GPGNIMNLYRGVKRASENFEDVSIELVESPR---N-DLYDLLFIPG------VGHFGEGMRRLRENDLIDFV 70 (201)
T ss_dssp EEEEECC-SSSCCHHHHHHHHHHSTTBSSCEEEEECSCC---S-SCCSEEEECC------CSCSHHHHHHHHHTTCHHHH
T ss_pred EEEEEec-CCchHHHHHHHHHHcCCCCCceEEEEECCCc---c-cCCCEEEECC------CCcHHHHHHHHHhhCHHHHH
Confidence 4666652 2111256788899999 9999988643 1 5667666642 1221111 233333
Q ss_pred HHHhhCCCcEEEEe
Q psy2575 146 LAAQHYSIPYPCTF 159 (165)
Q Consensus 146 l~Ak~~~vPv~V~~ 159 (165)
..+...++|++-+|
T Consensus 71 ~~~~~~~~PilGIC 84 (201)
T 1gpw_B 71 RKHVEDERYVVGVC 84 (201)
T ss_dssp HHHHHTTCEEEEET
T ss_pred HHHHHcCCeEEEEC
Confidence 33446789999877
No 292
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=59.86 E-value=9.8 Score=29.20 Aligned_cols=78 Identities=12% Similarity=0.076 Sum_probs=44.3
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccce--eecCCCeeehhcHHHHHHHHhhCCC
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHT--VMANGGLRSVCGTHAVALAAQHYSI 153 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~--V~~nG~vvnk~GT~~lAl~Ak~~~v 153 (165)
+.+|.|++. +..- ....+.|++.|+++.+++... .+.++|.++++--. ... ......+...+...+...++
T Consensus 23 ~~~I~il~~-~~~~-~~~~~~l~~~G~~~~~~~~~~---~l~~~Dglil~GG~~~~~~--~~~~~~~~~~~i~~~~~~~~ 95 (219)
T 1q7r_A 23 NMKIGVLGL-QGAV-REHVRAIEACGAEAVIVKKSE---QLEGLDGLVLPGGESTTMR--RLIDRYGLMEPLKQFAAAGK 95 (219)
T ss_dssp CCEEEEESC-GGGC-HHHHHHHHHTTCEEEEECSGG---GGTTCSEEEECCCCHHHHH--HHHHHTTCHHHHHHHHHTTC
T ss_pred CCEEEEEeC-CCCc-HHHHHHHHHCCCEEEEECCHH---HHhhCCEEEECCCChHHHH--HHhhhhHHHHHHHHHHHcCC
Confidence 467777764 3211 245688999999999988632 35678888775210 000 00001222333334446789
Q ss_pred cEEEEee
Q psy2575 154 PYPCTFL 160 (165)
Q Consensus 154 Pv~V~~~ 160 (165)
|++-+|-
T Consensus 96 PilGIC~ 102 (219)
T 1q7r_A 96 PMFGTCA 102 (219)
T ss_dssp CEEEETT
T ss_pred eEEEECH
Confidence 9998773
No 293
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=59.78 E-value=37 Score=24.95 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=43.4
Q ss_pred EEEecCCCCChHHHHHHHHhhcCCceEEEccchH-HHhc-hhCCEEEEccceeecCCCeeehhcH-HHHHHHHhhCCCcE
Q psy2575 79 CIVMENSPENKGHELAVSLAKSKIQTVLIPDSAM-FGLI-SRVNKIIIGTHTVMANGGLRSVCGT-HAVALAAQHYSIPY 155 (165)
Q Consensus 79 ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav-~~~m-~~v~~VllGAd~V~~nG~vvnk~GT-~~lAl~Ak~~~vPv 155 (165)
|.|++....+ ...+++.|++.|.++.+++...- ..+- .++|.+++.--. ..+ ..|. ..+...+.+.++|+
T Consensus 3 i~iid~~~~~-~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~dglil~Gg~-~~~-----~~~~~~~~i~~~~~~~~Pi 75 (189)
T 1wl8_A 3 IVIMDNGGQY-VHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKGIIFSGGP-SLE-----NTGNCEKVLEHYDEFNVPI 75 (189)
T ss_dssp EEEEECSCTT-HHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSEEEECCCS-CTT-----CCTTHHHHHHTGGGTCSCE
T ss_pred EEEEECCCch-HHHHHHHHHHCCCeEEEEECCCChHHhcccCCCEEEECCCC-Chh-----hhhhHHHHHHHHhhCCCeE
Confidence 5566655544 45778899999999988886532 2222 247877774322 111 1233 22222233578999
Q ss_pred EEEee
Q psy2575 156 PCTFL 160 (165)
Q Consensus 156 ~V~~~ 160 (165)
+-+|-
T Consensus 76 lGIC~ 80 (189)
T 1wl8_A 76 LGICL 80 (189)
T ss_dssp EEETH
T ss_pred EEEcH
Confidence 98773
No 294
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=59.78 E-value=29 Score=28.06 Aligned_cols=18 Identities=22% Similarity=0.023 Sum_probs=14.1
Q ss_pred HHHHHHHhhCCCcEEEEe
Q psy2575 142 HAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 142 ~~lAl~Ak~~~vPv~V~~ 159 (165)
+...++|+..++|++...
T Consensus 130 ~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 130 IAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHhCCCEEEEE
Confidence 335677899999998876
No 295
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=59.69 E-value=43 Score=24.76 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=39.7
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccc----hHHHhchhCC---EEEEccceeecCCCeeehhcHHHHHHHHhh
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDS----AMFGLISRVN---KIIIGTHTVMANGGLRSVCGTHAVALAAQH 150 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds----av~~~m~~v~---~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~ 150 (165)
+|.|+|..- .--..+++.|++.|.++++++.. .+...+...+ .|+.|--.-. ...|...-.+-+-.
T Consensus 2 ~i~iiDn~~-s~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~------~~~~~~~~l~~~~~ 74 (192)
T 1i1q_B 2 DILLLDNID-SFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVP------SEAGCMPELLTRLR 74 (192)
T ss_dssp EEEEEECSC-SSHHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCG------GGSTTHHHHHHHHB
T ss_pred cEEEEECCc-cHHHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECCCCcCc------hhCchHHHHHHHHh
Confidence 456666221 12456789999999999988854 2223333333 5555432211 22232221122224
Q ss_pred CCCcEEEEe
Q psy2575 151 YSIPYPCTF 159 (165)
Q Consensus 151 ~~vPv~V~~ 159 (165)
.++|++-+|
T Consensus 75 ~~~PilGIC 83 (192)
T 1i1q_B 75 GKLPIIGIC 83 (192)
T ss_dssp TTBCEEEET
T ss_pred cCCCEEEEC
Confidence 689999776
No 296
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=59.60 E-value=43 Score=28.45 Aligned_cols=118 Identities=8% Similarity=0.005 Sum_probs=64.0
Q ss_pred ChHHHHHHHHHHhcccCCCCEEE---EecCCHHHHHHHHHHHhCCceEEEEecCCCCChH-HHHH--------HHHhhcC
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIIL---TLGYSKIVELFLKNAAQHRKFQCIVMENSPENKG-HELA--------VSLAKSK 101 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~IL---T~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG-~~la--------~~L~~~G 101 (165)
....++.+-+..++++.....++ +.|.+..+...+.... ++.-+|++.+. |.+.+ ..+. ..+...|
T Consensus 71 ~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all-~pGD~Vl~~~~-~~y~~~~~~~g~~~~~~~~~l~~~G 148 (427)
T 3i16_A 71 GDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNL-RPGNTMLSVCG-EPYDTLHDVIGITENSNMGSLKEFG 148 (427)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHC-CTTCEEEESSS-SCCGGGHHHHTCSCCCSSCCTGGGT
T ss_pred CHHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHh-CCCCEEEEeCC-CccHHHHHHHhccccchHHHHHHcC
Confidence 34445555555566665544554 4444444433443332 34456666652 44443 3344 5667789
Q ss_pred CceEEEcc--------chHHHhch---hCCEEEEccceeecCCCeeehhcH----HHHHHHHhh--CCCcEEE
Q psy2575 102 IQTVLIPD--------SAMFGLIS---RVNKIIIGTHTVMANGGLRSVCGT----HAVALAAQH--YSIPYPC 157 (165)
Q Consensus 102 I~v~~I~d--------sav~~~m~---~v~~VllGAd~V~~nG~vvnk~GT----~~lAl~Ak~--~~vPv~V 157 (165)
+++..++. ..+...+. +...|++.... |..-|..|+ ..++-+|++ ++++++|
T Consensus 149 ~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~----~~p~nptg~i~dl~~i~~la~~~~~g~~liv 217 (427)
T 3i16_A 149 INYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRST----GYGWRRALLIEDIKSIVDCVKNIRKDIICFV 217 (427)
T ss_dssp CEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSC----CSSSSCCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCC----CCCCCCcccHHHHHHHHHHHHHhCCCCEEEE
Confidence 99888764 33444444 34444444321 223444444 457778898 8998886
No 297
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=59.49 E-value=30 Score=26.93 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=59.6
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.++++.|.|+-+=..+......+..+|+++..++......+++.+.+.|-++.++. | ..+..++. +
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678888888876633333222224578888766554333456677777776666553 3 22333332 4
Q ss_pred CCEEEEccceeecCCC-------------eeehhcHHHHHHHHhhC--CCcEEEE
Q psy2575 119 VNKIIIGTHTVMANGG-------------LRSVCGTHAVALAAQHY--SIPYPCT 158 (165)
Q Consensus 119 v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~Ak~~--~vPv~V~ 158 (165)
+|.++-.|- +...+. -+|-.|++.+..++..+ +..-+|.
T Consensus 108 iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 161 (283)
T 1g0o_A 108 LDIVCSNSG-VVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 161 (283)
T ss_dssp CCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEECCC-cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEE
Confidence 676665552 222221 13567888887776654 3444444
No 298
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=59.47 E-value=13 Score=27.47 Aligned_cols=99 Identities=10% Similarity=0.061 Sum_probs=53.7
Q ss_pred EEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--cchHHHhchhCCEEEEcccee-
Q psy2575 54 IILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--DSAMFGLISRVNKIIIGTHTV- 129 (165)
Q Consensus 54 ~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--dsav~~~m~~v~~VllGAd~V- 129 (165)
+|++.|.|.-+=. +.....+ +..+|+++.-+|. -...|...++.+.... |... ..+..+|.|+--|-..
T Consensus 2 kilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~-----~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~ 74 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR-RGHEVLAVVRDPQ-----KAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVPW 74 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHH-----HHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCCT
T ss_pred EEEEEcCCCHHHHHHHHHHHH-CCCEEEEEEeccc-----ccccccCCCceEEecccccccH-hhcccCCEEEECCccCC
Confidence 4777777655533 3333333 4467777754332 1233444555443322 2222 4566677666544222
Q ss_pred ecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 130 MANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 130 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
...-.-.|..|+..+.-+|+..+..++.++
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 75 GSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp TSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 111223488899999999999986665554
No 299
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=59.29 E-value=38 Score=29.05 Aligned_cols=94 Identities=14% Similarity=-0.024 Sum_probs=53.8
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceee
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~ 130 (165)
.|..|+++|.+..-..-.....+ ..-+|.|++..... .+ ..|.+.+ .++++...--...+..++.|+...+-=
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~-~ga~V~vi~~~~~~---~~-~~l~~~~-~i~~~~~~~~~~~l~~~~lVi~at~~~- 83 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLE-AGARLTVNALTFIP---QF-TVWANEG-MLTLVEGPFDETLLDSCWLAIAATDDD- 83 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH-TTBEEEEEESSCCH---HH-HHHHTTT-SCEEEESSCCGGGGTTCSEEEECCSCH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-CcCEEEEEcCCCCH---HH-HHHHhcC-CEEEEECCCCccccCCccEEEEcCCCH-
Confidence 36789999999877665555554 23456666543332 22 3333322 244443322223455677777654321
Q ss_pred cCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 131 ANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 131 ~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.=..+++..|++.++||.++.
T Consensus 84 --------~~n~~i~~~a~~~~i~vn~~d 104 (457)
T 1pjq_A 84 --------TVNQRVSDAAESRRIFCNVVD 104 (457)
T ss_dssp --------HHHHHHHHHHHHTTCEEEETT
T ss_pred --------HHHHHHHHHHHHcCCEEEECC
Confidence 114578899999999986653
No 300
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=59.21 E-value=18 Score=28.45 Aligned_cols=110 Identities=8% Similarity=-0.016 Sum_probs=54.6
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHh-hcCCceEEEc---cchHHHhchh--CCEEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLA-KSKIQTVLIP---DSAMFGLISR--VNKIII 124 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~---dsav~~~m~~--v~~Vll 124 (165)
.+.+||+.|.+.-+=..|......+..+|+++..++..........+. ..++.+.... ...+..+++. +|.|+-
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 467899988876664433332222346788776554431111222231 2233322211 1234555664 477665
Q ss_pred ccceeecC---CC-----eeehhcHHHHHHHHhhCCC-cEEEEee
Q psy2575 125 GTHTVMAN---GG-----LRSVCGTHAVALAAQHYSI-PYPCTFL 160 (165)
Q Consensus 125 GAd~V~~n---G~-----vvnk~GT~~lAl~Ak~~~v-Pv~V~~~ 160 (165)
-|-..... .. -+|-.|+..+.-+|+..++ +-+|...
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 137 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS 137 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 44321110 00 1455789999999998875 5555443
No 301
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=58.79 E-value=31 Score=29.69 Aligned_cols=48 Identities=10% Similarity=-0.057 Sum_probs=27.4
Q ss_pred HHhchhCCEEEEccceeecC----CC-----eeehhcHHHHHHH-HhhCCCcEEEEee
Q psy2575 113 FGLISRVNKIIIGTHTVMAN----GG-----LRSVCGTHAVALA-AQHYSIPYPCTFL 160 (165)
Q Consensus 113 ~~~m~~v~~VllGAd~V~~n----G~-----vvnk~GT~~lAl~-Ak~~~vPv~V~~~ 160 (165)
...+.++|.|+--|-....+ .. -+|-.||..++-+ |+..+++.+|...
T Consensus 196 ~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S 253 (516)
T 3oh8_A 196 SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS 253 (516)
T ss_dssp TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 34456677776544322110 00 1367789999887 7777877666544
No 302
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=58.70 E-value=55 Score=25.67 Aligned_cols=71 Identities=15% Similarity=0.213 Sum_probs=42.7
Q ss_pred EEEEe--cCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEcc----------chHHHhch--
Q psy2575 54 IILTL--GYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPD----------SAMFGLIS-- 117 (165)
Q Consensus 54 ~ILT~--g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~d----------sav~~~m~-- 117 (165)
.|..+ |..+....+|....++. .++|. |+-.+|...+.+.| .+.|||+..+.. ..+...++
T Consensus 24 rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~ 100 (229)
T 3auf_A 24 RIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERA---RRAGVDALHMDPAAYPSRTAFDAALAERLQAY 100 (229)
T ss_dssp EEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH---HHTTCEEEECCGGGSSSHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH---HHcCCCEEEECcccccchhhccHHHHHHHHhc
Confidence 44444 77777777777655542 45543 33345666665555 458999987653 33444454
Q ss_pred hCCEEEEccc
Q psy2575 118 RVNKIIIGTH 127 (165)
Q Consensus 118 ~v~~VllGAd 127 (165)
++|.+++.+-
T Consensus 101 ~~Dliv~agy 110 (229)
T 3auf_A 101 GVDLVCLAGY 110 (229)
T ss_dssp TCSEEEESSC
T ss_pred CCCEEEEcCh
Confidence 4788887654
No 303
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=58.54 E-value=26 Score=30.04 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=37.9
Q ss_pred cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 109 DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 109 dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.-++.++|..=+ ..|+.+.=|.+-.-+|+..---+|++|++|+.|..
T Consensus 181 pPa~~all~~~~----~idgfi~PGHVstIiG~~~y~~l~~~y~~P~VVaG 227 (372)
T 2z1d_A 181 PPAVEVLLKQGT----VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAG 227 (372)
T ss_dssp HHHHHHHHHTSC----CCSEEEEEHHHHHHHTTHHHHHHHHHHCCCEEEEC
T ss_pred HHHHHHHHcCCC----cCcEEEecCeeeEEeccchhHHHHHHcCCCEEEcC
Confidence 445666776544 66777777899999999999999999999998863
No 304
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=58.45 E-value=36 Score=26.62 Aligned_cols=55 Identities=7% Similarity=0.060 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 61 SKIVELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 61 S~tV~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
......++..+.++++ -+++..+.|.. -|..+++.|.+.|+++++|| -|++.++.
T Consensus 83 ~~~~~~i~~~~~~g~~-Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~ 140 (259)
T 2e0n_A 83 AANYASMAEEVQAGRR-VAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAG 140 (259)
T ss_dssp GGGHHHHHHHHHTTCE-EEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCe-EEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHH
Confidence 3345555555555655 45566788975 56688999999999999999 45555444
No 305
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=58.30 E-value=70 Score=26.11 Aligned_cols=111 Identities=14% Similarity=0.190 Sum_probs=62.7
Q ss_pred HHHhcccCC-CCEEEE-ecCCHHHHHHHHHHH---h---C-CceEEEEe-cCC---CCC-hHHHHHHHHhhcCCceE-EE
Q psy2575 43 SQACEHIHS-NEIILT-LGYSKIVELFLKNAA---Q---H-RKFQCIVM-ENS---PEN-KGHELAVSLAKSKIQTV-LI 107 (165)
Q Consensus 43 ~~a~~~I~~-~~~ILT-~g~S~tV~~~L~~A~---~---~-~~f~ViV~-Es~---P~~-eG~~la~~L~~~GI~v~-~I 107 (165)
+.-.++|.. +-++|- .+..+|+++.+..|+ + + .=+++.|. |.+ |.. +-.+.++.|.+.|+.|- |+
T Consensus 63 ~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~ 142 (265)
T 1wv2_A 63 PNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYT 142 (265)
T ss_dssp -------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred chHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEe
Confidence 344567765 566664 466678877666554 2 2 23566665 444 222 44566999999999998 67
Q ss_pred ccchH-HHhchhCCEEEEccceeecCCCeeeh----hcHHHHHHHHhhCCCcEEEE
Q psy2575 108 PDSAM-FGLISRVNKIIIGTHTVMANGGLRSV----CGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 108 ~dsav-~~~m~~v~~VllGAd~V~~nG~vvnk----~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.|+-+ +.-+.+. |+++|.+-|..+.. .--..+-.+.+..++||++-
T Consensus 143 ~dd~~~akrl~~~-----G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~e 193 (265)
T 1wv2_A 143 SDDPIIARQLAEI-----GCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVD 193 (265)
T ss_dssp CSCHHHHHHHHHS-----CCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEE
T ss_pred CCCHHHHHHHHHh-----CCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEe
Confidence 77644 3345554 56666553332110 11345677777889998873
No 306
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=58.28 E-value=69 Score=27.13 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=59.6
Q ss_pred CCCCEEEEecCCHHHHH-HHHHHHh-CC-ceEEEEecCCCCChHHHHHHHH------------------hhcCCceEEEc
Q psy2575 50 HSNEIILTLGYSKIVEL-FLKNAAQ-HR-KFQCIVMENSPENKGHELAVSL------------------AKSKIQTVLIP 108 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~-~L~~A~~-~~-~f~ViV~Es~P~~eG~~la~~L------------------~~~GI~v~~I~ 108 (165)
..+.+||+.|.+.-+=. +.....+ .. ..+|+++.-++..+ ....+| ...++.+....
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE--DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH--HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH--HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 45788999887765533 3333333 22 47888887555422 111111 11344433332
Q ss_pred c---------chHHHhchhCCEEEEccceeecC----CCeeehhcHHHHHHHHhhCCC-cEEEEee
Q psy2575 109 D---------SAMFGLISRVNKIIIGTHTVMAN----GGLRSVCGTHAVALAAQHYSI-PYPCTFL 160 (165)
Q Consensus 109 d---------sav~~~m~~v~~VllGAd~V~~n----G~vvnk~GT~~lAl~Ak~~~v-Pv~V~~~ 160 (165)
. ..+..++.++|.|+--|-.+-.+ ---.|-.||..++-+|+..++ +|+.+..
T Consensus 149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred CCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 2 14556677777777554322110 011477899999999999987 5544443
No 307
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=58.27 E-value=15 Score=30.23 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=62.7
Q ss_pred ChHHHHHHHHHHhcccC--C-CCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHH-HHHHhhcCC------
Q psy2575 34 ANPTSDTAPSQACEHIH--S-NEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHEL-AVSLAKSKI------ 102 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~--~-~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~l-a~~L~~~GI------ 102 (165)
.....+.+++..+++.. . .++++|-|.+..+...+..+.. ..+-+|++.+. .+.|... +..+.....
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~--~yhg~~~~~~~~~~~~~~~~~~~ 161 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAG--AYHGCTVGSMAFSGHSVQADAAK 161 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETT--CCCCSSHHHHCC-----------
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECC--CCCCCcHHHHhhcCCCchhhccc
Confidence 44556777777777763 3 3567777777777777776543 22336666643 2222211 222211111
Q ss_pred ------ceEEEc-------------cchHHHhch---hCCEEEEccceeecCCCeee-hhc-HHHHHHHHhhCCCcEEE
Q psy2575 103 ------QTVLIP-------------DSAMFGLIS---RVNKIIIGTHTVMANGGLRS-VCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 103 ------~v~~I~-------------dsav~~~m~---~v~~VllGAd~V~~nG~vvn-k~G-T~~lAl~Ak~~~vPv~V 157 (165)
.+..++ ..++-..+. .-+..++=.+.+..+++.+. .-+ -..|+-+|++|++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 240 (439)
T 3dxv_A 162 ADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 240 (439)
T ss_dssp --CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 122222 123444442 11223333345666655544 444 46688889999998875
No 308
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=58.22 E-value=63 Score=25.07 Aligned_cols=111 Identities=14% Similarity=0.026 Sum_probs=57.4
Q ss_pred cCCCCEEEEecCCHHHHHHH-HHHHhCCceEEEEecCCCCChHHHHHHHHhh-cCCceEEE--cc----chHHHhchhCC
Q psy2575 49 IHSNEIILTLGYSKIVELFL-KNAAQHRKFQCIVMENSPENKGHELAVSLAK-SKIQTVLI--PD----SAMFGLISRVN 120 (165)
Q Consensus 49 I~~~~~ILT~g~S~tV~~~L-~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~-~GI~v~~I--~d----sav~~~m~~v~ 120 (165)
+..+.+||+.|.+.-+=..| ....+ +..+|+++...+. ....+...+.+ .+-.++++ .| .++..++.++|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLE-HGYKVRGTARSAS-KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSHH-HHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHH-CCCEEEEEeCCcc-cHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 34577899998876653333 33333 4467887754332 22233333332 12344444 23 23444555566
Q ss_pred EEEEccceeecCCC-----eeehhcHHHHHHHHhh-CCCcEEEEeec
Q psy2575 121 KIIIGTHTVMANGG-----LRSVCGTHAVALAAQH-YSIPYPCTFLL 161 (165)
Q Consensus 121 ~VllGAd~V~~nG~-----vvnk~GT~~lAl~Ak~-~~vPv~V~~~~ 161 (165)
.|+--|-....+.. -+|-.|+..+.-+|+. .+++-+|...+
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 66654422111001 1356899999998874 56665554433
No 309
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=58.18 E-value=40 Score=28.25 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=62.6
Q ss_pred HHHHHHHHhcccC----CCCEEEEecCCHHHHHHHHHHHh------C-CceEEEEecCCCCChHHHHHHHHhhcCCceEE
Q psy2575 38 SDTAPSQACEHIH----SNEIILTLGYSKIVELFLKNAAQ------H-RKFQCIVMENSPENKGHELAVSLAKSKIQTVL 106 (165)
Q Consensus 38 ~~~Ia~~a~~~I~----~~~~ILT~g~S~tV~~~L~~A~~------~-~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~ 106 (165)
.+.+.+..++++. ....++|.|.+..+...+..+.+ + .+-+|++.+ |.+.+ ..+.+...|+++..
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~--~~h~~--~~~~~~~~G~~~~~ 184 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPV--TAHAG--FDKAAYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEET--TSCHH--HHHHHHHSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeC--CccHH--HHHHHHHcCCeEEE
Confidence 4455555555553 34678887777666666665543 2 113666653 44444 34444557988888
Q ss_pred Eccch---------HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 107 IPDSA---------MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 107 I~dsa---------v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
++... +...+.+-.++++....-.+.|.+.. . -.|+-+|++++++++|
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~-l--~~i~~la~~~g~~liv 241 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD-I--EGLGKIAQKYKLPLHV 241 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS-C--TTTTTHHHHTTCCEEE
T ss_pred EecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC-H--HHHHHHHHHhCCEEEE
Confidence 87432 22223222344443322234454433 2 2577889999999987
No 310
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=58.00 E-value=28 Score=27.76 Aligned_cols=126 Identities=8% Similarity=0.046 Sum_probs=72.7
Q ss_pred CChHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceE-----------EEEecCCCCChHHHHHHHHhhcC
Q psy2575 33 FANPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQ-----------CIVMENSPENKGHELAVSLAKSK 101 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~-----------ViV~Es~P~~eG~~la~~L~~~G 101 (165)
|.....+++++.-..+ +....|++||.++.....+....-..+|. .-+++..-..-...++..|.+.|
T Consensus 24 ~~~~~l~~l~~~i~~l-~~~~~vlVhGGG~~~~~~~~~~gi~~~~~~~~g~~~~~~G~rvT~~~~~~ln~~l~~~L~~~G 102 (269)
T 3ll9_A 24 IDRDNLERIASEIGNA-SPSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRRRRFGFALTQNWVKKLNSHVCDALLAEG 102 (269)
T ss_dssp ECHHHHHHHHHHHHHH-CCSSEEEEECCGGGTHHHHHHHTTTSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHh-cCCCEEEEECCcHHHHHHHHHcCCCcccccCcccccccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence 4333344455444332 24679999999888777776553333331 00000000001233577788899
Q ss_pred CceEEEcc----------------chHHHhchhCCEEEEccceee-cC--CCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 102 IQTVLIPD----------------SAMFGLISRVNKIIIGTHTVM-AN--GGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 102 I~v~~I~d----------------sav~~~m~~v~~VllGAd~V~-~n--G~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
++...++- ..+..++.+-..+++..+.++ .+ |.+.|--+=...+++|...+-..++++
T Consensus 103 ~~a~~l~g~~~~~~~~g~v~~v~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~l 179 (269)
T 3ll9_A 103 IPAVSMQPSAFIRAHAGRISHADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILG 179 (269)
T ss_dssp CCEEECCGGGTEEEETTEEEEECCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEE
T ss_pred CcEEEEcchHcCeEecCeeeeecHHHHHHHHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEe
Confidence 88766532 334455566566777776665 45 677777677777788888877655543
No 311
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=57.99 E-value=32 Score=22.80 Aligned_cols=82 Identities=6% Similarity=0.036 Sum_probs=35.9
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchH-HHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-CC
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAM-FGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-YS 152 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav-~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~~ 152 (165)
.+|+++|..|.. ...+...|.+.|+.+....+..- ...+. ..|.+++..+. +.+..-...|-..+..+-+. .+
T Consensus 4 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~--~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNKGV-LTAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNF--TSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCHHH-HHHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTT--TC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCHHH-HHHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCc--CCCCCCCccHHHHHHHHHhhCcC
Confidence 456666555432 22345556666666654443221 11222 25666665432 10000011233333333333 46
Q ss_pred CcEEEEeec
Q psy2575 153 IPYPCTFLL 161 (165)
Q Consensus 153 vPv~V~~~~ 161 (165)
+|+++++..
T Consensus 81 ~~ii~ls~~ 89 (140)
T 2qr3_A 81 LPVVLFTAY 89 (140)
T ss_dssp CCEEEEEEG
T ss_pred CCEEEEECC
Confidence 888887654
No 312
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=57.93 E-value=37 Score=28.88 Aligned_cols=111 Identities=17% Similarity=0.097 Sum_probs=56.5
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCCh--HHHHHHHHhh-----------cCCceEEEcc---chHHH
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENK--GHELAVSLAK-----------SKIQTVLIPD---SAMFG 114 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~e--G~~la~~L~~-----------~GI~v~~I~d---sav~~ 114 (165)
+..+||+.|.+..+=..|......+..+|+++.-++... -.++...|.. .++.+..... ..+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 346888888776665544444445667888875444421 1223333322 2333332221 1222
Q ss_pred hchhCCEEEEccceeecCC-----CeeehhcHHHHHHHHhhCCCcEEEEeecc
Q psy2575 115 LISRVNKIIIGTHTVMANG-----GLRSVCGTHAVALAAQHYSIPYPCTFLLN 162 (165)
Q Consensus 115 ~m~~v~~VllGAd~V~~nG-----~vvnk~GT~~lAl~Ak~~~vPv~V~~~~~ 162 (165)
.+.++|.|+--|-.+-.+. --.|-.||..++-+|+....+|+.+....
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~ 280 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTIS 280 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESC
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChh
Confidence 3344554443332111000 01377899999999998667766665443
No 313
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=57.92 E-value=77 Score=25.96 Aligned_cols=83 Identities=12% Similarity=0.026 Sum_probs=51.8
Q ss_pred ceEEEEecCCCCChHHHHHHH----HhhcCCceEEEccchHH-----HhchhCCEEEEccceeecCCCeeehhcHHHHHH
Q psy2575 76 KFQCIVMENSPENKGHELAVS----LAKSKIQTVLIPDSAMF-----GLISRVNKIIIGTHTVMANGGLRSVCGTHAVAL 146 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~----L~~~GI~v~~I~dsav~-----~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl 146 (165)
..+|.++=.++.+..+.+|+. |.+.|++++++...... .-+.++|.+++|+=.. +|++-...-.+.=-+
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~l~~~D~iiigsP~y--~~~~~~~~k~fld~l 333 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSDITKVALHTYDSGAVAFASPTL--NNTMMPSVAAALNYV 333 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHTCSEEEEECCCB--TTBCCHHHHHHHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcCCHHHHHHHHHhCCEEEEEcCcc--CcCchHHHHHHHHHH
Confidence 457777766777766666554 55578888887654332 2467899999997543 455655543332222
Q ss_pred HHhh--CCCcEEEEee
Q psy2575 147 AAQH--YSIPYPCTFL 160 (165)
Q Consensus 147 ~Ak~--~~vPv~V~~~ 160 (165)
.... .++|+.+++-
T Consensus 334 ~~~~~~~~K~~~~~~t 349 (414)
T 2q9u_A 334 RGLTLIKGKPAFAFGA 349 (414)
T ss_dssp HHHTTTTTSBEEEEEE
T ss_pred HhhcccCCCEEEEEEe
Confidence 2222 5899987764
No 314
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=57.92 E-value=38 Score=25.19 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=43.9
Q ss_pred EEEecCCCCChHHHHHHHHhhcCCceEEEccch--HHHhch-hCCEEEE-cc-ceeecCCCeeehhcHH-HHHHHHhhCC
Q psy2575 79 CIVMENSPENKGHELAVSLAKSKIQTVLIPDSA--MFGLIS-RVNKIII-GT-HTVMANGGLRSVCGTH-AVALAAQHYS 152 (165)
Q Consensus 79 ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa--v~~~m~-~v~~Vll-GA-d~V~~nG~vvnk~GT~-~lAl~Ak~~~ 152 (165)
|.|++....+ ...+++.|++.|+++.+++... ...+.. ++|.+++ |. .+... . .+.+-. .+...+ ..+
T Consensus 4 i~iid~~~s~-~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~~~~~~-~---~~~~~~~~~i~~~-~~~ 77 (195)
T 1qdl_B 4 TLIIDNYDSF-VYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEK-R---EDIGVSLDVIKYL-GKR 77 (195)
T ss_dssp EEEEECSCSS-HHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCSSCTTS-H---HHHTTHHHHHHHH-TTT
T ss_pred EEEEECCCch-HHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCCCChhh-h---hhhhHHHHHHHHh-cCC
Confidence 6677755444 4577999999999999888653 222222 5898888 43 11111 0 112322 222223 468
Q ss_pred CcEEEEe
Q psy2575 153 IPYPCTF 159 (165)
Q Consensus 153 vPv~V~~ 159 (165)
+|++-+|
T Consensus 78 ~PvLGIC 84 (195)
T 1qdl_B 78 TPILGVC 84 (195)
T ss_dssp SCEEEET
T ss_pred CcEEEEe
Confidence 9999877
No 315
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=57.91 E-value=69 Score=25.42 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=60.1
Q ss_pred HHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHH---hCCce-EEEEecCCCCChHH-HHHHHHhhcCCceEEEccc-
Q psy2575 39 DTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAA---QHRKF-QCIVMENSPENKGH-ELAVSLAKSKIQTVLIPDS- 110 (165)
Q Consensus 39 ~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~---~~~~f-~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~ds- 110 (165)
+.+.+..++++.- ..+++|-|.+..+...+.... .++.- +|++.+ |.+.+. .....+...|.++..++..
T Consensus 66 ~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (400)
T 3vax_A 66 ERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSA--IEHKAVLEPLEHLAGRGFEVDFLTPGP 143 (400)
T ss_dssp HHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEET--TSCHHHHHHHHHHHTTTCEEEEECCCT
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECc--cccHhHHHHHHHHHhcCCeEEEEccCC
Confidence 3444444445542 356777665555555554432 12233 677663 333332 2344556689998888743
Q ss_pred -------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+-.++++-...-.+.|.+.. -..|+-+|+++++++++
T Consensus 144 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 144 SGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHV 194 (400)
T ss_dssp TCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEE
T ss_pred CCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEE
Confidence 222223222344433333334454433 25788899999998886
No 316
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=57.71 E-value=33 Score=27.57 Aligned_cols=92 Identities=14% Similarity=0.240 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhcccCCCCEEEE-ecCCHHHHHHHHHHHhCCceEEEEecC-----CCCC---hH--HHHHHHHhhcCCce
Q psy2575 36 PTSDTAPSQACEHIHSNEIILT-LGYSKIVELFLKNAAQHRKFQCIVMEN-----SPEN---KG--HELAVSLAKSKIQT 104 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT-~g~S~tV~~~L~~A~~~~~f~ViV~Es-----~P~~---eG--~~la~~L~~~GI~v 104 (165)
+.++.|+.++++.|+||+++-+ +|-...|..++.... .+.+.+. .|+ .|.. .+ ..++. ..
T Consensus 6 ~~~e~Ia~~aA~~i~dG~~v~lGiGiP~~va~~~~~~~-~~~l~l~-~E~G~lg~~p~~~~~~~~d~~~~~-------~a 76 (260)
T 1poi_B 6 TNKEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVY-APDCHII-VESGLMDCSPVEVPRSVGDLRFMA-------HC 76 (260)
T ss_dssp CHHHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTT-CTTCEEE-ETTTEEEECCSSCCSSTTCHHHHT-------SE
T ss_pred CHHHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHHhc-CCCEEEE-EeCceecCcccCcccCccCCCcEe-------eh
Confidence 3478999999999999999887 563334444444322 4555544 233 3321 11 11111 23
Q ss_pred -EEEccchHHHh-----ch--hCCEEEEccceeecCCCee
Q psy2575 105 -VLIPDSAMFGL-----IS--RVNKIIIGTHTVMANGGLR 136 (165)
Q Consensus 105 -~~I~dsav~~~-----m~--~v~~VllGAd~V~~nG~vv 136 (165)
.++.....+.+ +. +.|..|+||--|-.+|.+-
T Consensus 77 ~~~~~~~~~fd~~~~~~~~~g~~Dv~ilGa~qVD~~Gnvn 116 (260)
T 1poi_B 77 GCIWPNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVN 116 (260)
T ss_dssp EEECCHHHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEE
T ss_pred hhhcCHHHHhcccchhhhhcCCccEEEeChHHhCCCCCcc
Confidence 33333344545 43 4899999999999999888
No 317
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=57.55 E-value=37 Score=22.15 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=40.6
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHh---h
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ---H 150 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak---~ 150 (165)
.+|+++|..|.. ...+.+.|.+.|..|....+..-.. .+ .+.|.+++..+- ++ .-|--.+..+-+ .
T Consensus 4 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVEDYQAA-AETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFIDLNL--PD-----TSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECSCHHH-HHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEESBC--SS-----SBHHHHHHHHHHSCCS
T ss_pred ceEEEEcCCHHH-HHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHHhhhcc
Confidence 466666665542 2345566666777666655433221 22 236777776542 22 223333333333 3
Q ss_pred CCCcEEEEeec
Q psy2575 151 YSIPYPCTFLL 161 (165)
Q Consensus 151 ~~vPv~V~~~~ 161 (165)
.++|+++++..
T Consensus 76 ~~~~ii~~s~~ 86 (127)
T 3i42_A 76 KTSKFVAVSGF 86 (127)
T ss_dssp SCCEEEEEECC
T ss_pred CCCCEEEEECC
Confidence 56898888754
No 318
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=57.35 E-value=64 Score=25.17 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=65.0
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCC------hHHHHHHHHhhcCCceEEEc-c----chHHHhch--
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPEN------KGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-- 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~------eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-- 117 (165)
.+.++++.|.|+-+=..+......+..+|+++..++.. .-.+.++.+.+.|-++..+. | .++..++.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 46788888888766443433333355788887655432 34567788888787776653 2 22333333
Q ss_pred -----hCCEEEEccceeecCCCe-------------eehhcHHHHHHHHhhC----CCcEEEEeec
Q psy2575 118 -----RVNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQHY----SIPYPCTFLL 161 (165)
Q Consensus 118 -----~v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~~----~vPv~V~~~~ 161 (165)
++|.++-.|- +...+.+ +|-.|++.++.++..+ +.+.+|...+
T Consensus 88 ~~~~g~id~lvnnAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 88 VEQFGGIDICVNNAS-AINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp HHHHSCCSEEEECCC-CCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred HHHcCCCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 5777776653 2333322 6778888888776554 4455555433
No 319
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=57.35 E-value=37 Score=22.14 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=38.4
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCc
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vP 154 (165)
+|+++|..|.. ...+...|.+.|..+....+..-.. .+ .+.|.+++..+ +++ .-|--.+..+-+.+++|
T Consensus 4 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~--~p~-----~~g~~~~~~lr~~~~~~ 75 (120)
T 3f6p_A 4 KILVVDDEKPI-ADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIM--LPN-----KDGVEVCREVRKKYDMP 75 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETT--STT-----THHHHHHHHHHTTCCSC
T ss_pred eEEEEECCHHH-HHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCC--CCC-----CCHHHHHHHHHhcCCCC
Confidence 45556555432 2233455556666665544332211 12 23566666433 332 23444455555567788
Q ss_pred EEEEeec
Q psy2575 155 YPCTFLL 161 (165)
Q Consensus 155 v~V~~~~ 161 (165)
+++++..
T Consensus 76 ii~~t~~ 82 (120)
T 3f6p_A 76 IIMLTAK 82 (120)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 8887654
No 320
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=57.32 E-value=17 Score=28.06 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=24.8
Q ss_pred HHHHHHHHhhcCCceEEEccchHH-----------HhchhCCEEEE
Q psy2575 90 GHELAVSLAKSKIQTVLIPDSAMF-----------GLISRVNKIII 124 (165)
Q Consensus 90 G~~la~~L~~~GI~v~~I~dsav~-----------~~m~~v~~Vll 124 (165)
-.++++..++.|+++..|++..-. .+-+.+|.+|.
T Consensus 124 ~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 124 PVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp HHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 344567777788888888877655 55666888885
No 321
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=57.28 E-value=30 Score=23.11 Aligned_cols=80 Identities=10% Similarity=0.118 Sum_probs=41.7
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-C
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-Y 151 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~ 151 (165)
..+|+++|..|.. ...+...|.+.|+.+....+..-.. .+. +.|.|++..+ +++| ..-|.-.+..+-+. .
T Consensus 6 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~~---~~~g~~~~~~l~~~~~ 79 (136)
T 3kto_A 6 HPIIYLVDHQKDA-RAALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAH--LEDK---KDSGIELLETLVKRGF 79 (136)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETT--GGGB---TTHHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCc--CCCC---CccHHHHHHHHHhCCC
Confidence 3577777766542 2345666777787777555433222 122 3566666543 2221 02343334333333 4
Q ss_pred CCcEEEEeec
Q psy2575 152 SIPYPCTFLL 161 (165)
Q Consensus 152 ~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 80 ~~~ii~~s~~ 89 (136)
T 3kto_A 80 HLPTIVMASS 89 (136)
T ss_dssp CCCEEEEESS
T ss_pred CCCEEEEEcC
Confidence 7899988754
No 322
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=57.03 E-value=39 Score=23.93 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=32.6
Q ss_pred HHHHhhcCCceEEEc--cchHHH---hch--hCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEe
Q psy2575 94 AVSLAKSKIQTVLIP--DSAMFG---LIS--RVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 94 a~~L~~~GI~v~~I~--dsav~~---~m~--~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.+.+.+.|++++... ...... +.. ++|.+++|+..- |++-. -.|+..- -+.++.++||+|+-
T Consensus 93 ~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g~---~~~~~~~~Gsva~-~vl~~a~~pVlvv~ 162 (175)
T 2gm3_A 93 VNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGL---GRFQKVFVGTVSA-FCVKHAECPVMTIK 162 (175)
T ss_dssp HHHHHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECCC---C--------CHHH-HHHHHCSSCEEEEE
T ss_pred HHHHHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCC---ChhhhhhcCchHH-HHHhCCCCCEEEEc
Confidence 444556777765322 222222 223 599999998752 22221 2455443 44566789999984
No 323
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=56.92 E-value=54 Score=23.90 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=40.0
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHH----HHHHHhhCCC
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHA----VALAAQHYSI 153 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~----lAl~Ak~~~v 153 (165)
+|.|++-.-.+ ....+.|++.|.++.++++. ..+.++|.++++- +--...+... +.-..+..++
T Consensus 2 ~i~vl~~~g~~--~~~~~~l~~~G~~~~~~~~~---~~~~~~dglil~G-------G~~~~~~~~~~~~~~~~~i~~~~~ 69 (186)
T 2ywj_A 2 IIGVLAIQGDV--EEHEEAIKKAGYEAKKVKRV---EDLEGIDALIIPG-------GESTAIGKLMKKYGLLEKIKNSNL 69 (186)
T ss_dssp EEEEECSSSCC--HHHHHHHHHTTSEEEEECSG---GGGTTCSEEEECC-------SCHHHHHHHHHHTTHHHHHHTCCC
T ss_pred EEEEEecCcch--HHHHHHHHHCCCEEEEECCh---HHhccCCEEEECC-------CCchhhhhhhhccCHHHHHHhcCC
Confidence 45566542122 23568899999999988863 2456677777753 3111111100 1122347789
Q ss_pred cEEEEe
Q psy2575 154 PYPCTF 159 (165)
Q Consensus 154 Pv~V~~ 159 (165)
|++-+|
T Consensus 70 PilGIC 75 (186)
T 2ywj_A 70 PILGTC 75 (186)
T ss_dssp CEEEET
T ss_pred cEEEEC
Confidence 999877
No 324
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=56.82 E-value=43 Score=29.52 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=53.4
Q ss_pred HHHhcccCCCCEEEEecCC------HHHHHHHHHHHh----CC--ceEEEEec-CC-----------------CCChHHH
Q psy2575 43 SQACEHIHSNEIILTLGYS------KIVELFLKNAAQ----HR--KFQCIVME-NS-----------------PENKGHE 92 (165)
Q Consensus 43 ~~a~~~I~~~~~ILT~g~S------~tV~~~L~~A~~----~~--~f~ViV~E-s~-----------------P~~eG~~ 92 (165)
+.|..+|+||++|...|+. ..+.++..+..+ +. +++++..- .. |.+.|..
T Consensus 9 eEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~~~~~~~ 88 (506)
T 2nvv_A 9 EEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTPYQSNKD 88 (506)
T ss_dssp HHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCceEEEEEecCCCcchhHHhccCCceEEEeeeCCCHH
Confidence 4566789999999987653 233334444332 12 34444321 11 2233344
Q ss_pred HHHHHhhcCCceEEEccchHHHhch-----hCCEEEEccceeecCCCeeeh
Q psy2575 93 LAVSLAKSKIQTVLIPDSAMFGLIS-----RVNKIIIGTHTVMANGGLRSV 138 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav~~~m~-----~v~~VllGAd~V~~nG~vvnk 138 (165)
+.+..++-.++..-+..+.+..++. ++|..++-+...-.+|.+.-.
T Consensus 89 ~r~~i~~G~i~~~P~~ls~v~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 139 (506)
T 2nvv_A 89 LRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPT 139 (506)
T ss_dssp HHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECC
T ss_pred HHHHHHcCCCeEeCCCcccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 4444433334433333455554442 589999999999999987654
No 325
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=56.69 E-value=19 Score=30.98 Aligned_cols=95 Identities=5% Similarity=-0.017 Sum_probs=46.9
Q ss_pred HHHHh-cccCCCCEEEEecCCHHHHHHHHHHHh----CCceEEEEec--CCC-C--------------ChHHHHHHHHhh
Q psy2575 42 PSQAC-EHIHSNEIILTLGYSKIVELFLKNAAQ----HRKFQCIVME--NSP-E--------------NKGHELAVSLAK 99 (165)
Q Consensus 42 a~~a~-~~I~~~~~ILT~g~S~tV~~~L~~A~~----~~~f~ViV~E--s~P-~--------------~eG~~la~~L~~ 99 (165)
++.|. ++|+||++|...++..+=..++....+ -++++++-.- ..+ . +-|..+.+. .+
T Consensus 14 a~eAv~~~IkdG~tV~~ggf~g~P~~Li~AL~~~~~~~~dLtli~~~~~~~~~~~~~~l~~~i~~~~~~~g~~~r~~-i~ 92 (439)
T 3d3u_A 14 ADEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQREKLENITVFHMLYFGDAPHLAPEMRSHVHPTLNFLEGNSRPA-SR 92 (439)
T ss_dssp HHHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTTTCCSEEEECSCBSSCCTTSSGGGTTTEEEEC-------------
T ss_pred HHHHHHhhCCCcCEEEECcccChHHHHHHHHHHhhCCCCCEEEEEecCCCcchhccHHhCCcEEEEECCCChHHHHH-HH
Confidence 45566 789999999998765332333332222 2677777431 111 1 112222222 22
Q ss_pred cC-CceEEEccchHH-Hhch---hCCEEEEccceeecCCCeee
Q psy2575 100 SK-IQTVLIPDSAMF-GLIS---RVNKIIIGTHTVMANGGLRS 137 (165)
Q Consensus 100 ~G-I~v~~I~dsav~-~~m~---~v~~VllGAd~V~~nG~vvn 137 (165)
.| ++.+-+-.+.+. ++.. ++|..++.+...-.+|.+.-
T Consensus 93 ~G~~~~~P~~ls~~~~~l~~~~l~~DVAlI~as~~D~~Gnls~ 135 (439)
T 3d3u_A 93 DRRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSF 135 (439)
T ss_dssp --------CCGGGHHHHHTTSSSCCSEEEEEEECCCTTSEEEC
T ss_pred cCCCeEECCCcchHHHHHHcCCCCCCEEEEEEecCCCCceEEE
Confidence 23 222222233333 3332 48999999999999998865
No 326
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=56.56 E-value=47 Score=27.08 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=58.0
Q ss_pred CEEEEecCCHHHHHHHHHHHh-CCceEE-EEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhc-----hhCCEEEEc
Q psy2575 53 EIILTLGYSKIVELFLKNAAQ-HRKFQC-IVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLI-----SRVNKIIIG 125 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~-~~~f~V-iV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m-----~~v~~VllG 125 (165)
..|..+|.+..=..++..+.+ ...+++ .+++..|...|+.+++. .|+++. .+ .+..++ +++|.|++.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~---~g~~~~--~~-~~e~ll~~~~~~~iDvV~~a 78 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTT--YA-GVEGLIKLPEFADIDFVFDA 78 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEE--SS-HHHHHHHSGGGGGEEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH---cCCCcc--cC-CHHHHHhccCCCCCcEEEEC
Confidence 468888877655666665544 455664 46777777768887764 466532 22 222232 567888876
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhC--CCcEEEEeeccc
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHY--SIPYPCTFLLNI 163 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V~~~~~~ 163 (165)
.-. -=...++..|-+. +++|++..|..+
T Consensus 79 tp~----------~~h~~~a~~al~a~~Gk~Vi~ekp~~~ 108 (312)
T 1nvm_B 79 TSA----------SAHVQNEALLRQAKPGIRLIDLTPAAI 108 (312)
T ss_dssp SCH----------HHHHHHHHHHHHHCTTCEEEECSTTCS
T ss_pred CCh----------HHHHHHHHHHHHhCCCCEEEEcCcccc
Confidence 421 1125566677777 999988666543
No 327
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=56.38 E-value=64 Score=25.96 Aligned_cols=109 Identities=17% Similarity=0.062 Sum_probs=60.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCC----CChHHHHHHHHhhcCCceEEEc-----cchHHHhch----
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSP----ENKGHELAVSLAKSKIQTVLIP-----DSAMFGLIS---- 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P----~~eG~~la~~L~~~GI~v~~I~-----dsav~~~m~---- 117 (165)
.+.++++.|.|+-+=..+..+.-.+..+|+++.-++ ......++..+.+.|.++..+. ..++..++.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 356888888887664433333323457787654332 2223445566666676666553 233444444
Q ss_pred ---hCCEEEEccceeecCCC-------------eeehhcHHHHHHHH----hhCCCcEEEEee
Q psy2575 118 ---RVNKIIIGTHTVMANGG-------------LRSVCGTHAVALAA----QHYSIPYPCTFL 160 (165)
Q Consensus 118 ---~v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~~~ 160 (165)
++|.++-.|- +...|. -+|-.|+..+..++ +..+...+|...
T Consensus 84 ~~g~iD~lVnnAG-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~is 145 (324)
T 3u9l_A 84 EDGRIDVLIHNAG-HMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWIS 145 (324)
T ss_dssp HHSCCSEEEECCC-CCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HcCCCCEEEECCC-cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 5777776553 222222 34778898888777 544555555433
No 328
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=56.27 E-value=72 Score=25.10 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=24.2
Q ss_pred hCCEEEEccceeecCCCeeeh--hc--HHHHHHHHh
Q psy2575 118 RVNKIIIGTHTVMANGGLRSV--CG--THAVALAAQ 149 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvnk--~G--T~~lAl~Ak 149 (165)
+.|..|+-+...-.+|.+.-. .+ ...+|.+||
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk 186 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK 186 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC
Confidence 589999999999999998775 22 344566666
No 329
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=56.25 E-value=30 Score=21.76 Aligned_cols=76 Identities=9% Similarity=0.086 Sum_probs=39.8
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh---C
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH---Y 151 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~---~ 151 (165)
+|+++|..|.. ...+...|...|..+....+..-. ..+. ..|.+++..+. ++ ..|...+..+.+. .
T Consensus 3 ~iliv~~~~~~-~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~--~~-----~~~~~~~~~l~~~~~~~ 74 (119)
T 2j48_A 3 HILLLEEEDEA-ATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPP--PD-----QSCLLLLQHLREHQADP 74 (119)
T ss_dssp EEEEECCCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECST--TC-----CTHHHHHHHHHHTCCCS
T ss_pred EEEEEeCCHHH-HHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCC--CC-----CCHHHHHHHHHhccccC
Confidence 56666655432 234556666677776655543221 1122 36777776432 21 2243334444443 4
Q ss_pred CCcEEEEeec
Q psy2575 152 SIPYPCTFLL 161 (165)
Q Consensus 152 ~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 75 ~~~ii~~~~~ 84 (119)
T 2j48_A 75 HPPLVLFLGE 84 (119)
T ss_dssp SCCCEEEESS
T ss_pred CCCEEEEeCC
Confidence 7899988754
No 330
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=56.08 E-value=55 Score=26.70 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHh-----C--CceEEEEecCCCCChHHHH-HHHHhhcC-
Q psy2575 33 FANPTSDTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQ-----H--RKFQCIVMENSPENKGHEL-AVSLAKSK- 101 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~-----~--~~f~ViV~Es~P~~eG~~l-a~~L~~~G- 101 (165)
+.....+.+++..+++.. ...+++|-|.+..+...|..+.+ + .+-+|++.+ |.+.|... +..+....
T Consensus 69 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~ 146 (430)
T 3i4j_A 69 FSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRV--PSYHGASLGSLAASGMGA 146 (430)
T ss_dssp CEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TC----------------
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEe--CCcCCCCcccccccCccc
Confidence 344455666666666653 34677777777777766665542 1 234666654 34444332 22221111
Q ss_pred ---------C--ceEEEcc-----------chHHHhchh---CCEEEEccceeec-CCCe-eehhc-HHHHHHHHhhCCC
Q psy2575 102 ---------I--QTVLIPD-----------SAMFGLISR---VNKIIIGTHTVMA-NGGL-RSVCG-THAVALAAQHYSI 153 (165)
Q Consensus 102 ---------I--~v~~I~d-----------sav~~~m~~---v~~VllGAd~V~~-nG~v-vnk~G-T~~lAl~Ak~~~v 153 (165)
- ++..++. ..+-..+.+ -+..++=.+.+.. +||. +-..+ -..++-+|++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~ 226 (430)
T 3i4j_A 147 RRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGI 226 (430)
T ss_dssp ---------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTC
T ss_pred cccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 0 3444442 445555542 1222222334443 3333 43444 3457788999999
Q ss_pred cEEE
Q psy2575 154 PYPC 157 (165)
Q Consensus 154 Pv~V 157 (165)
++++
T Consensus 227 ~li~ 230 (430)
T 3i4j_A 227 IFIA 230 (430)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8775
No 331
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=56.02 E-value=43 Score=22.48 Aligned_cols=92 Identities=13% Similarity=0.234 Sum_probs=50.2
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch----HHHh-chhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA----MFGL-ISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa----v~~~-m~~v~~VllGA 126 (165)
+..|+.+|.+..=..+.....+ ...+|++.+..|. -++.+.+.|.++.. .|.. +... +.++|.|+..+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~-~g~~v~~~d~~~~-----~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR-MGHEVLAVDINEE-----KVNAYASYATHAVI-ANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCCEEEESCHH-----HHHTTTTTCSEEEE-CCTTCHHHHHTTTGGGCSEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCHH-----HHHHHHHhCCEEEE-eCCCCHHHHHhcCCCCCCEEEECC
Confidence 4568888887554555554444 2356777765432 23445566665432 2211 1112 56678887765
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
..- .--...++..|+..+++.+++
T Consensus 79 ~~~--------~~~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 79 GAN--------IQASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp CSC--------HHHHHHHHHHHHHTTCSEEEE
T ss_pred CCc--------hHHHHHHHHHHHHcCCCeEEE
Confidence 321 012245777888888874443
No 332
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=55.98 E-value=58 Score=23.98 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=59.5
Q ss_pred CCCEEEEecCCHHHHH-HHHHHHhC-CceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEc
Q psy2575 51 SNEIILTLGYSKIVEL-FLKNAAQH-RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIG 125 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~-~L~~A~~~-~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllG 125 (165)
.+.+|++.|-+..+=. +.....+. ...+|+++..+|.. ...+ ..++.+.... ..++..+++++|.|+--
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~-----~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEKI-GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH-----HHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc-----hhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 3567888887766633 33433332 26788887654321 1222 2344333221 24566677888888866
Q ss_pred cceeecCC-----------C----------eeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 126 THTVMANG-----------G----------LRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 126 Ad~V~~nG-----------~----------vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|-.....+ . -+|-.|+..+.-+|+..+++-+|...
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~S 132 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVG 132 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEc
Confidence 53221100 0 24667999999999988887665543
No 333
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=55.76 E-value=42 Score=22.26 Aligned_cols=75 Identities=11% Similarity=0.046 Sum_probs=39.3
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhC
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY 151 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~ 151 (165)
...+|+++|..|.. ...+...|.+.|+.+....+..-. ..+. ..|.++ +++ .-|-..+..+-+..
T Consensus 17 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------~~~-----~~g~~~~~~l~~~~ 84 (137)
T 2pln_A 17 GSMRVLLIEKNSVL-GGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSD-----KNALSFVSRIKEKH 84 (137)
T ss_dssp TCSEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE------ECS-----TTHHHHHHHHHHHS
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE------EcC-----ccHHHHHHHHHhcC
Confidence 45677777766542 234566666777777655543221 1222 356666 222 12333333333335
Q ss_pred -CCcEEEEeec
Q psy2575 152 -SIPYPCTFLL 161 (165)
Q Consensus 152 -~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 85 ~~~~ii~ls~~ 95 (137)
T 2pln_A 85 SSIVVLVSSDN 95 (137)
T ss_dssp TTSEEEEEESS
T ss_pred CCccEEEEeCC
Confidence 7888888654
No 334
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=55.69 E-value=7.1 Score=30.62 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=56.0
Q ss_pred HHHHHHHHhcccCCCCEEEE-ecCCHHHHHHHHHHHhCCceEEEEecCC-----CCC-hHHHHHHHHhhcCCc-------
Q psy2575 38 SDTAPSQACEHIHSNEIILT-LGYSKIVELFLKNAAQHRKFQCIVMENS-----PEN-KGHELAVSLAKSKIQ------- 103 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT-~g~S~tV~~~L~~A~~~~~f~ViV~Es~-----P~~-eG~~la~~L~~~GI~------- 103 (165)
++.|+.++++.|+||++|-. +|-...|-.++. ++++. +..|+- |.. +|..- ..|...|-.
T Consensus 2 r~~Ia~raA~el~dG~~vnlGIGiP~~va~~~~----~~~v~-l~~E~G~~g~~p~p~~~~~d-~~~in~G~~~~t~~~~ 75 (207)
T 3rrl_B 2 REAIIKRAAKELKEGMYVNLGIGLPTLVANEVS----GMNIV-FQSENGLLGIGAYPLEGSVD-ADLINAGKETITVVPG 75 (207)
T ss_dssp HHHHHHHHHTTCCTTCEEEECTTGGGGGGGGGS----SSCCE-EEETTTEEEECCCCCTTCCC-TTCBCTTSBBCCEEEE
T ss_pred hHHHHHHHHHhCCCCCEEEECCChHHHHHHhcc----CCcEE-EEeccceecCcCCCCccccC-HhHeecCCceeeecCC
Confidence 78999999999999998776 564334444444 34433 344543 221 11111 223333421
Q ss_pred eEEEccchHHHhch--hCCEEEEccceeecCCCeee
Q psy2575 104 TVLIPDSAMFGLIS--RVNKIIIGTHTVMANGGLRS 137 (165)
Q Consensus 104 v~~I~dsav~~~m~--~v~~VllGAd~V~~nG~vvn 137 (165)
-.++.....+.+++ ++|..++|+--|-.+|.+-+
T Consensus 76 ~~~~~~~~~F~~~~gG~~Dvailga~qVD~~Gnvn~ 111 (207)
T 3rrl_B 76 ASFFNSADSFAMIRGGHIDLAILGGMEVSQNGDLAN 111 (207)
T ss_dssp EEECCHHHHHHHHHTTCCSEEEECCSEEETTSCEEC
T ss_pred ceeeCCHHHHHHHhCCCeeEEEECHHHHCcCCCccc
Confidence 22333333455554 49999999999999998864
No 335
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=55.65 E-value=36 Score=27.48 Aligned_cols=104 Identities=11% Similarity=0.033 Sum_probs=54.3
Q ss_pred CCCEEEEecCCHHHHHHH-HHHHhCCc-eEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhchhCCEEE
Q psy2575 51 SNEIILTLGYSKIVELFL-KNAAQHRK-FQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLISRVNKII 123 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L-~~A~~~~~-f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~~v~~Vl 123 (165)
.+.+||+.|.+.-+=..| ....+ +. .+|+++..++...- ..|. .+-.++++. | ..+..+++++|.|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~----~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLE-LGVNQVHVVDNLLSAEK----INVP-DHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCSEEEEECCCTTCCG----GGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH-cCCceEEEEECCCCCch----hhcc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 356888888876664433 33333 34 78888765543211 1111 122333332 2 23445566666666
Q ss_pred EccceeecC--------CCeeehhcHHHHHHHHhhC-CCcEEEEee
Q psy2575 124 IGTHTVMAN--------GGLRSVCGTHAVALAAQHY-SIPYPCTFL 160 (165)
Q Consensus 124 lGAd~V~~n--------G~vvnk~GT~~lAl~Ak~~-~vPv~V~~~ 160 (165)
--|-....+ ---+|-.|+..++-+|+.. +++-+|...
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~S 150 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSA 150 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 444221100 0013567899999999998 776555443
No 336
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=55.51 E-value=25 Score=27.55 Aligned_cols=106 Identities=9% Similarity=0.020 Sum_probs=53.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhchh--CCEEEE
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLISR--VNKIII 124 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~~--v~~Vll 124 (165)
+.+||+.|.+.-+=..|......+..+|+++..++........+.+.. +-++.++. | .++..++.. +|.|+-
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc-cCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 567888888766633333222224578888765554211111122211 11233332 2 344555665 476665
Q ss_pred ccceeecC---CC-----eeehhcHHHHHHHHhhCCC-cEEEE
Q psy2575 125 GTHTVMAN---GG-----LRSVCGTHAVALAAQHYSI-PYPCT 158 (165)
Q Consensus 125 GAd~V~~n---G~-----vvnk~GT~~lAl~Ak~~~v-Pv~V~ 158 (165)
-|-....+ .. -+|-.|+..+.-+|+..++ +-+|.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~ 124 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQ 124 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 54321110 00 2466889999999988775 44443
No 337
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=55.43 E-value=22 Score=28.26 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=43.2
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccch---HHHhchhCCEEEEccceeecCCCeeehh-cHHHHHHHHhhCCC
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA---MFGLISRVNKIIIGTHTVMANGGLRSVC-GTHAVALAAQHYSI 153 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa---v~~~m~~v~~VllGAd~V~~nG~vvnk~-GT~~lAl~Ak~~~v 153 (165)
+|.++...|...-..+...|.+.|++++++.-.. ...-+.++|.+|+.--....+.. .... ....+...+-..++
T Consensus 5 ~vliiqh~~~e~~~~i~~~l~~~G~~v~v~~~~~~~~~p~~~~~~d~lIl~GGp~~~~d~-~~~~~~~~~~i~~~~~~~~ 83 (250)
T 3m3p_A 5 PVMIIQFSASEGPGHFGDFLAGEHIPFQVLRMDRSDPLPAEIRDCSGLAMMGGPMSANDD-LPWMPTLLALIRDAVAQRV 83 (250)
T ss_dssp CEEEEESSSSCCCHHHHHHHHHTTCCEEEEEGGGTCCCCSCGGGSSEEEECCCSSCTTSC-CTTHHHHHHHHHHHHHHTC
T ss_pred eEEEEECCCCCCHHHHHHHHHHCCCeEEEEeccCCCcCcCccccCCEEEECCCCCccccc-chHHHHHHHHHHHHHHcCC
Confidence 5666665554433456788999999998887221 12224567877774321111111 1111 11122222335689
Q ss_pred cEEEEe
Q psy2575 154 PYPCTF 159 (165)
Q Consensus 154 Pv~V~~ 159 (165)
|++-+|
T Consensus 84 PvlGIC 89 (250)
T 3m3p_A 84 PVIGHC 89 (250)
T ss_dssp CEEEET
T ss_pred CEEEEC
Confidence 999877
No 338
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=55.41 E-value=33 Score=23.39 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=37.5
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecC-CCCChHHHHHHHHhhc--CCceEEEccch
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMEN-SPENKGHELAVSLAKS--KIQTVLIPDSA 111 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es-~P~~eG~~la~~L~~~--GI~v~~I~dsa 111 (165)
..+-.|.+.... ...+....+...|.++++|- -|...|..+++.|++. .+++.+++...
T Consensus 25 ~~~~~v~~~~~~---~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 86 (151)
T 3kcn_A 25 SFDFEVTTCESG---PEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ 86 (151)
T ss_dssp TTTSEEEEESSH---HHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG
T ss_pred ccCceEEEeCCH---HHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC
Confidence 345555555544 33444344445678888774 4888999999999875 46666666543
No 339
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=55.31 E-value=47 Score=25.50 Aligned_cols=93 Identities=19% Similarity=0.143 Sum_probs=54.8
Q ss_pred EEEecCCHHHHHHHHHHHhCCceEEEEe---cC-CCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceee
Q psy2575 55 ILTLGYSKIVELFLKNAAQHRKFQCIVM---EN-SPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVM 130 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~~f~ViV~---Es-~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~ 130 (165)
|+--|.|+.=.++|..+ +-.|+|+.. |+ .|...-.+++.+|+...-. ++..-++ -+ +++|||.|.
T Consensus 5 lILAS~SPrR~eLL~~~--gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~-------av~~~~~-~~-~VigaDTvV 73 (189)
T 1ex2_A 5 LILASQSPRRKELLDLL--QLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAK-------AVADLHP-HA-IVIGADTMV 73 (189)
T ss_dssp EEECCCCHHHHHHHHTT--CCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHHH-------HHHHHCT-TS-EEEEEEEEE
T ss_pred EEEECCCHHHHHHHHhC--CCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHHcC-CC-eEEEeCeEE
Confidence 44456666545566543 678988743 44 2222234677777665410 1112121 23 799999965
Q ss_pred -cCCCeeehhcHHHHH--HHHhhCCCcEEEE
Q psy2575 131 -ANGGLRSVCGTHAVA--LAAQHYSIPYPCT 158 (165)
Q Consensus 131 -~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~ 158 (165)
-||.++.|-.+..=| ++.+..+...-|.
T Consensus 74 ~~~g~ilgKP~~~~eA~~mL~~lsG~~h~v~ 104 (189)
T 1ex2_A 74 CLDGECLGKPQDQEEAASMLRRLSGRSHSVI 104 (189)
T ss_dssp EETTEEECCCSSHHHHHHHHHHHTTSEEEEE
T ss_pred EECCEEcCCCCCHHHHHHHHHHhCCCcEEEE
Confidence 499999999988655 4555556555554
No 340
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=55.30 E-value=68 Score=27.11 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=66.3
Q ss_pred CChHHHHHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHh-------CCceEEEEecCCCCChHHHH-HHHHhhc--
Q psy2575 33 FANPTSDTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQ-------HRKFQCIVMENSPENKGHEL-AVSLAKS-- 100 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~-------~~~f~ViV~Es~P~~eG~~l-a~~L~~~-- 100 (165)
+......++++...++.. ...++++-|.|..++..|+.+.+ ..+-+|++.+ |.+.|..+ +..+...
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~--~~yHg~~~~~~~~~~~~~ 171 (476)
T 3i5t_A 94 MATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRY--DGYHGSTALTAACTGRTG 171 (476)
T ss_dssp CBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TCCCCSSHHHHHTCCCGG
T ss_pred cCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc--CCcCcCChhhccccCChh
Confidence 445556777777777764 23566666777777777776653 1245667664 33344333 2222211
Q ss_pred --------CCceEEEc--c-----------------chHHHhchh---CCEEEEccceeecCCCe-eehhcH-HHHHHHH
Q psy2575 101 --------KIQTVLIP--D-----------------SAMFGLISR---VNKIIIGTHTVMANGGL-RSVCGT-HAVALAA 148 (165)
Q Consensus 101 --------GI~v~~I~--d-----------------sav~~~m~~---v~~VllGAd~V~~nG~v-vnk~GT-~~lAl~A 148 (165)
.-.+..++ . ..+-..+.+ -+...+=.+.+..+||. +-..+- -.++-+|
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc 251 (476)
T 3i5t_A 172 NWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAIC 251 (476)
T ss_dssp GCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHH
T ss_pred hccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence 11234444 1 233344432 12233333457777764 545553 3477899
Q ss_pred hhCCCcEEE
Q psy2575 149 QHYSIPYPC 157 (165)
Q Consensus 149 k~~~vPv~V 157 (165)
++|++.+++
T Consensus 252 ~~~gillI~ 260 (476)
T 3i5t_A 252 EKHDILYIS 260 (476)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCEEEE
Confidence 999998875
No 341
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=55.22 E-value=31 Score=27.57 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 64 VELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 64 V~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
...++..+.++++ -|++....|.. -|..+++.|.+.|+++++|| -|++.++.
T Consensus 83 ~~~i~~~~~~g~~-Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~ 137 (285)
T 1cbf_A 83 VGTMLDRMREGKM-VVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAA 137 (285)
T ss_dssp HHHHHHHHTTTCC-EEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHH
T ss_pred HHHHHHHHHCCCe-EEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHH
Confidence 3444444444555 44555689964 56788999999999999999 45555443
No 342
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=55.14 E-value=72 Score=25.94 Aligned_cols=102 Identities=7% Similarity=-0.059 Sum_probs=57.6
Q ss_pred CEEEEec-CCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCc--eEEEc-cchHHHhchhCCEEEEccc
Q psy2575 53 EIILTLG-YSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQ--TVLIP-DSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 53 ~~ILT~g-~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~--v~~I~-dsav~~~m~~v~~VllGAd 127 (165)
..|++.| .+..=..+.....+ +.-.+|.+.|-.+. +| .+..|.+...+ +..+. .......++.+|.|++-+-
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~--~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PG--VTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HH--HHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-Hh--HHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 4678887 34322222222222 32256777775554 33 35566664443 33222 2345567899999999886
Q ss_pred eeecCCC------eeehhcHHHHHHHHhhCCCcEEE
Q psy2575 128 TVMANGG------LRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 128 ~V~~nG~------vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.--..|. -.|--++..++-.+++++....+
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~v 121 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIV 121 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 5444442 24557888888888877644333
No 343
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=55.13 E-value=17 Score=29.15 Aligned_cols=104 Identities=8% Similarity=0.026 Sum_probs=55.8
Q ss_pred CCEEEEecCCHHHHHHHHHHH-hCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc----cchHHHhchhCCEEEEcc
Q psy2575 52 NEIILTLGYSKIVELFLKNAA-QHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP----DSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~-~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~----dsav~~~m~~v~~VllGA 126 (165)
+.+||+.|.+..+=..|.... +...++|+++..++... ...+...++.+.... ...+..+++++|.|+--|
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----GDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----GGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----hhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 468888887766544333332 22257888886555321 111112344443322 123455677788777544
Q ss_pred ceeecCCC--------eeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 127 HTVMANGG--------LRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 127 d~V~~nG~--------vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
-....... -+|-.||..+.-+|+..+..|+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~S 140 (372)
T 3slg_A 100 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 140 (372)
T ss_dssp CCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEEC
T ss_pred ccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeC
Confidence 32211100 2466889999999998885544443
No 344
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=55.08 E-value=90 Score=25.87 Aligned_cols=117 Identities=13% Similarity=0.060 Sum_probs=59.4
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh--------C-CceEEEEecCCCCChHHHH-HHHHhh-----cC-
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ--------H-RKFQCIVMENSPENKGHEL-AVSLAK-----SK- 101 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~--------~-~~f~ViV~Es~P~~eG~~l-a~~L~~-----~G- 101 (165)
.+++++...++.....+++|-|.+..++..+..+.+ . .+-+|++.+ |.+.|... +..+.. .|
T Consensus 120 ~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~--~~yhg~~~~~~~~~g~~~~~~~~ 197 (439)
T 2oat_A 120 LGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAA--GNFWGRTLSAISSSTDPTSYDGF 197 (439)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEET--TCCCCSSHHHHTTCCCHHHHTTS
T ss_pred HHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEc--CCCCCCCHhHhhcCCChhcccCC
Confidence 444454444455444566666777777767765542 1 225777776 44444322 222221 11
Q ss_pred ----CceEEEcc---chHHHhchhCC-EEEEccceeecCCCeee-hhc-HHHHHHHHhhCCCcEEE
Q psy2575 102 ----IQTVLIPD---SAMFGLISRVN-KIIIGTHTVMANGGLRS-VCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 102 ----I~v~~I~d---sav~~~m~~v~-~VllGAd~V~~nG~vvn-k~G-T~~lAl~Ak~~~vPv~V 157 (165)
.++..++- .++-..+.+-+ ++++ .+-+..++|.+. ..+ -..++-+|++|++++++
T Consensus 198 ~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 262 (439)
T 2oat_A 198 GPFMPGFDIIPYNDLPALERALQDPNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIA 262 (439)
T ss_dssp CSCCTTEEEECSSCHHHHHHHTTSTTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCeEEeCCCCHHHHHHHhCCCCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 34555542 23444452112 2333 445555555432 222 34577889999998876
No 345
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=54.96 E-value=29 Score=26.50 Aligned_cols=25 Identities=16% Similarity=0.040 Sum_probs=19.9
Q ss_pred eehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 136 RSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 136 vnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.|-.||..+.-+|+..+++-+|...
T Consensus 88 ~nv~gt~~ll~a~~~~~~~~~v~~S 112 (319)
T 4b8w_A 88 KNVHMNDNVLHSAFEVGARKVVSCL 112 (319)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEc
Confidence 4677999999999999988666543
No 346
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=54.94 E-value=57 Score=26.35 Aligned_cols=103 Identities=9% Similarity=-0.019 Sum_probs=56.3
Q ss_pred CCEEEEecCCHHHHHHH-HHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEccc
Q psy2575 52 NEIILTLGYSKIVELFL-KNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L-~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd 127 (165)
+.+||+.|.+.-+=..| ....+ +..+|+++..++... ..+...++.+.... ..++..+++++|.|+--|-
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKH-EGHYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCccHHHHHHHHHHHH-CCCeEEEEECCCccc-----hhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 46888888876664333 33333 346788775444321 01122344433222 1235556677787776553
Q ss_pred eeec----CCC-----eeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 128 TVMA----NGG-----LRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 128 ~V~~----nG~-----vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
.... ... -+|-.|+..+.-+|+..+++-+|...
T Consensus 103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~S 144 (379)
T 2c5a_A 103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144 (379)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 2211 000 14667899999999998886555443
No 347
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=54.92 E-value=70 Score=24.79 Aligned_cols=110 Identities=9% Similarity=0.025 Sum_probs=55.5
Q ss_pred HHHHHHHHhcccC--CCC-EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccch---
Q psy2575 38 SDTAPSQACEHIH--SNE-IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSA--- 111 (165)
Q Consensus 38 ~~~Ia~~a~~~I~--~~~-~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsa--- 111 (165)
.+.+.+...+++. +.+ +++|-|.+..+...+. +..++ ++++...... +..+...+...|+++..++...
T Consensus 45 ~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~-~l~~~--~~i~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~ 119 (362)
T 3ffr_A 45 YKTASDNLKTLLELPSNYEVLFLASATEIWERIIQ-NCVEK--KSFHCVNGSF--SKRFYEFAGELGREAYKEEAAFGKG 119 (362)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHH-HHCSS--EEEEEECSHH--HHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHH-hccCC--cEEEEcCcHH--HHHHHHHHHHhCCCeEEEecCCCCC
Confidence 4444444455552 334 5555443333333333 33333 7666654322 3344455566798888876321
Q ss_pred -----HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhC-CCcEEE
Q psy2575 112 -----MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY-SIPYPC 157 (165)
Q Consensus 112 -----v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~-~vPv~V 157 (165)
+. .-++...|++- ..=.+.|.+.. -..++-+|+++ ++++++
T Consensus 120 ~d~~~l~-~~~~~~~v~~~-~~~nptG~~~~---l~~i~~la~~~p~~~li~ 166 (362)
T 3ffr_A 120 FYPADIT-VPADAEIICLT-HNETSSGVSMP---VEDINTFRDKNKDALIFV 166 (362)
T ss_dssp CCGGGCC-CCTTCCEEEEE-SEETTTTEECC---HHHHTTSGGGSTTSEEEE
T ss_pred CCHHHHh-ccCCccEEEEE-cCCCCcceeCC---HHHHHHHHHhCCCCEEEE
Confidence 11 11234444443 22234454443 34577789999 998886
No 348
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=54.89 E-value=18 Score=28.01 Aligned_cols=48 Identities=15% Similarity=0.035 Sum_probs=36.0
Q ss_pred EEEecCCHHHHHHHHHHHhC----CceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 55 ILTLGYSKIVELFLKNAAQH----RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~----~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
++++..+++|+.|+....+. ++.+++++ |...++.|.+.|+++.++++
T Consensus 188 ~v~ftS~s~v~~~~~~~~~~~~~l~~~~~~aI-------G~~Ta~~l~~~G~~~~~~a~ 239 (254)
T 4es6_A 188 GLVVSSGQGLQNLYQLAAADWPEIGRLPLFVP-------SPRVAEMARELGAQRVIDCR 239 (254)
T ss_dssp EEECCSHHHHHHHHHHHGGGHHHHTTSCEEES-------SHHHHHHHHHTTCSSEEECS
T ss_pred EEEEcCHHHHHHHHHHhhHHHHHHhCCeEEEE-------CHHHHHHHHHcCCCceEECC
Confidence 45566677999998866431 34556665 88999999999999888775
No 349
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=54.76 E-value=86 Score=25.58 Aligned_cols=109 Identities=7% Similarity=0.031 Sum_probs=63.8
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCC------hHHHHHHHHhhcCCceEEEc-c----chHHHhch--
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPEN------KGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-- 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~------eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-- 117 (165)
.|.++++.|.|+-+=..+......+..+|+++...+.. +-...++.+.+.|-++..+. | .++..++.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 47889999988776443333333355788877544432 13456788888887766552 2 23333443
Q ss_pred -----hCCEEEEccceeecCCC-------------eeehhcHHHHHHHH----hhCCCcEEEEee
Q psy2575 118 -----RVNKIIIGTHTVMANGG-------------LRSVCGTHAVALAA----QHYSIPYPCTFL 160 (165)
Q Consensus 118 -----~v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~~~ 160 (165)
++|.++-.|-.. ..+. -+|-.|++.++.++ +..+.+-+|...
T Consensus 124 ~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iS 187 (346)
T 3kvo_A 124 IKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNIS 187 (346)
T ss_dssp HHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEEC
T ss_pred HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEEC
Confidence 577777665332 2221 24678888888777 444555555443
No 350
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=54.66 E-value=8.5 Score=27.48 Aligned_cols=18 Identities=28% Similarity=0.250 Sum_probs=9.0
Q ss_pred HHHHHHHHhhcCCceEEE
Q psy2575 90 GHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 90 G~~la~~L~~~GI~v~~I 107 (165)
|..+|..|++.|++|+++
T Consensus 14 GL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 444455555555555544
No 351
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=54.28 E-value=1.2e+02 Score=26.88 Aligned_cols=42 Identities=12% Similarity=-0.093 Sum_probs=32.6
Q ss_pred hCCEEEEccceeecCCCeeehhc--H---HHHHHHHhhCCCcEEEEe
Q psy2575 118 RVNKIIIGTHTVMANGGLRSVCG--T---HAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvnk~G--T---~~lAl~Ak~~~vPv~V~~ 159 (165)
+.|..|+-+...-.+|.+.-... . ..+|.+||..+--|++-.
T Consensus 180 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~~a~aAk~~gg~VIveV 226 (531)
T 2ahu_A 180 APDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQV 226 (531)
T ss_dssp CCSEEEEECSEEETTCCEECTTSSCCTTHHHHHHHHHTTTCEEEEEE
T ss_pred CCeEEEEEcccCCCCceEEEcCcccccCHHHHHHhHhhcCCEEEEEE
Confidence 58999999999999999887632 2 368999997766666644
No 352
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=54.24 E-value=23 Score=26.84 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=44.0
Q ss_pred CCCChHHHH----HHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHh----hCCCcEE
Q psy2575 85 SPENKGHEL----AVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ----HYSIPYP 156 (165)
Q Consensus 85 ~P~~eG~~l----a~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak----~~~vPv~ 156 (165)
+..+.-+.+ ++.|.+.|+++.++.......-+.+.|.+++|+-+. +|.+-..+-.+.=-+-.. -.++++-
T Consensus 30 S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~~~~~l~~~d~vi~g~~Ty--~G~~p~~~~~fl~~L~~~~~~~l~~~~~a 107 (191)
T 1bvy_F 30 SNMGTAEGTARDLADIAMSKGFAPQVATLDSHAGNLPREGAVLIVTASY--NGHPPDNAKQFVDWLDQASADEVKGVRYS 107 (191)
T ss_dssp CSSSHHHHHHHHHHHHHHTTTCCCEEEEGGGSTTCCCSSSEEEEEECCB--TTBCCTTTHHHHHHHHTCCSSCCTTCCEE
T ss_pred CCChHHHHHHHHHHHHHHhCCCceEEeeHHHhhhhhhhCCeEEEEEeec--CCCcCHHHHHHHHHHHhccchhhCCCEEE
Confidence 344444444 455566788888876655323467789999999875 887655544443333211 2247777
Q ss_pred EEe
Q psy2575 157 CTF 159 (165)
Q Consensus 157 V~~ 159 (165)
|++
T Consensus 108 vfG 110 (191)
T 1bvy_F 108 VFG 110 (191)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 353
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=54.12 E-value=67 Score=26.19 Aligned_cols=118 Identities=9% Similarity=-0.025 Sum_probs=61.2
Q ss_pred ChHHHHHHHHHHhcccCCCCEEEEecCCHHH-HHHHHHHH-hC----C-------ceEEEEecCCCCChHHHHHHHHhhc
Q psy2575 34 ANPTSDTAPSQACEHIHSNEIILTLGYSKIV-ELFLKNAA-QH----R-------KFQCIVMENSPENKGHELAVSLAKS 100 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV-~~~L~~A~-~~----~-------~f~ViV~Es~P~~eG~~la~~L~~~ 100 (165)
....++.|+++. -+....+++|-|.+..+ ...+..+. ++ + .-+|++. .|.+.+... .+...
T Consensus 78 ~~~lr~~ia~~~--~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~--~p~y~~~~~--~~~~~ 151 (422)
T 3d6k_A 78 IADIRELWAEAL--GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCP--VPGYDRHFT--ITEHF 151 (422)
T ss_dssp CHHHHHHHHHHH--TCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEE--ESCCHHHHH--HHHHH
T ss_pred CHHHHHHHHHHh--CCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEe--CCccHHHHH--HHHHc
Confidence 356788888765 24455777777776554 24443333 22 1 2256665 366665543 33446
Q ss_pred CCceEEEcc-------chHHHhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHh-hCCCcEEE
Q psy2575 101 KIQTVLIPD-------SAMFGLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ-HYSIPYPC 157 (165)
Q Consensus 101 GI~v~~I~d-------sav~~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak-~~~vPv~V 157 (165)
|.++..++. ..+...+. ++..|++=+..=.+.|.+...-=-..++-+|+ ++++++++
T Consensus 152 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~ 218 (422)
T 3d6k_A 152 GFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVW 218 (422)
T ss_dssp TCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred CCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEE
Confidence 777766653 12333333 22223322222223354444333346777787 88887765
No 354
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=54.10 E-value=92 Score=25.68 Aligned_cols=104 Identities=9% Similarity=0.065 Sum_probs=65.6
Q ss_pred HHhcccCCCCEEEEecCCHHHHHHHHHHHh-C-CceEEEEecC---------CCC---------ChHHHHHHHHhhc--C
Q psy2575 44 QACEHIHSNEIILTLGYSKIVELFLKNAAQ-H-RKFQCIVMEN---------SPE---------NKGHELAVSLAKS--K 101 (165)
Q Consensus 44 ~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~-~~f~ViV~Es---------~P~---------~eG~~la~~L~~~--G 101 (165)
.+.+.++ +..|+..|-+.+=..++..... | ++++++ |. |.. ..-..+++.|++. +
T Consensus 29 ~~q~~L~-~~~VlivG~GGlG~~ia~~La~~Gvg~itlv--D~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~ 105 (346)
T 1y8q_A 29 EAQKRLR-ASRVLLVGLKGLGAEIAKNLILAGVKGLTML--DHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPM 105 (346)
T ss_dssp HHHHHHH-TCEEEEECCSHHHHHHHHHHHHHTCSEEEEE--CCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTT
T ss_pred HHHHHHh-CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE--ECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCC
Confidence 3344444 4688888888766666666655 5 344444 32 221 1234567788874 5
Q ss_pred CceEEEccch---HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 102 IQTVLIPDSA---MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 102 I~v~~I~dsa---v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
++++..+..- ...+++++|.|+.+.|. ..--..+.-.|+.+++|++...
T Consensus 106 v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~---------~~~r~~ln~~~~~~~ip~i~~~ 157 (346)
T 1y8q_A 106 VDVKVDTEDIEKKPESFFTQFDAVCLTCCS---------RDVIVKVDQICHKNSIKFFTGD 157 (346)
T ss_dssp SEEEEECSCGGGCCHHHHTTCSEEEEESCC---------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEecccCcchHHHhcCCCEEEEcCCC---------HHHHHHHHHHHHHcCCCEEEEe
Confidence 7777776432 34567889999887654 2334567788999999999764
No 355
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=54.06 E-value=38 Score=27.58 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=21.6
Q ss_pred ccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 125 GTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 125 GAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
-.|.|...|+-. +.+..++|+..++|+++-
T Consensus 92 ~PDvVi~~g~~~----s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVCVLGLGGYV----TGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSEEEECSSST----HHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCcc----hHHHHHHHHHcCCCEEEE
Confidence 456666666643 456778899999999863
No 356
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=53.84 E-value=49 Score=26.70 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHhcc----cCC-CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 35 NPTSDTAPSQACEH----IHS-NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~----I~~-~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
...++.+++...++ +.. ..+++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 70 ~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~-~gd~vl~~~--p~~~~~~--~~~~~~g~~~~~~~~ 144 (422)
T 3fvs_A 70 PPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVD-EGDEVIIIE--PFFDCYE--PMTMMAGGRPVFVSL 144 (422)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHH--HHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcC-CCCEEEEcC--CCchhhH--HHHHHcCCEEEEEec
Confidence 46677888766543 333 4677777766666656555433 334566654 4454432 334457877777653
Q ss_pred ch--------------------HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 110 SA--------------------MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 sa--------------------v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. +...+. +...|++. ..-.+.|.+..+---..++-+|+++++++++
T Consensus 145 ~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (422)
T 3fvs_A 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN-TPNNPLGKVFSREELELVASLCQQHDVVCIT 212 (422)
T ss_dssp BCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccccccccccccccCCCCCHHHHHhhcCCCceEEEEC-CCCCCCCcCCCHHHHHHHHHHHHHcCcEEEE
Confidence 21 222222 23334332 2223445555444455677889999998876
No 357
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=53.80 E-value=14 Score=34.22 Aligned_cols=61 Identities=15% Similarity=0.198 Sum_probs=42.6
Q ss_pred HhcccCCCCEEEEecCCH--HHHHHHHHHHhCC-----ceEEEEecCCCCChHHHHHHHHh---hcCCceEEEccc
Q psy2575 45 ACEHIHSNEIILTLGYSK--IVELFLKNAAQHR-----KFQCIVMENSPENKGHELAVSLA---KSKIQTVLIPDS 110 (165)
Q Consensus 45 a~~~I~~~~~ILT~g~S~--tV~~~L~~A~~~~-----~f~ViV~Es~P~~eG~~la~~L~---~~GI~v~~I~ds 110 (165)
-.+.|+.+|++|+++|-+ .+.++|..|++.. +.+.|.+.. +..+++.|. +.|++|+++.|-
T Consensus 336 iF~~I~~~DiLl~~p~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~~~-----ds~Iv~ALi~AA~rGv~V~vLvel 406 (705)
T 2o8r_A 336 LMEGIRRKDYLIHVPYYTYDYVVRLLMEAAISPDVSEIRLTQYRVAE-----NSSIISALEAAAQSGKKVSVFVEL 406 (705)
T ss_dssp HHHHHHHCCEEEEETTBCSHHHHHHHHHHHTCTTEEEEEEEESCCCS-----CCHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHhhCCeEeeChhHhHHHHHHHHHHhccCCCceEEEEEEEEEcC-----CHHHHHHHHHHHHCCCEEEEEEeC
Confidence 456788899999998764 6788999998633 333443322 245666665 589999999883
No 358
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=53.78 E-value=36 Score=27.08 Aligned_cols=18 Identities=22% Similarity=0.039 Sum_probs=14.0
Q ss_pred HHHHHHHhhCCCcEEEEe
Q psy2575 142 HAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 142 ~~lAl~Ak~~~vPv~V~~ 159 (165)
....++|+..++|++...
T Consensus 114 ~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 114 IAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhhCCCEEEEe
Confidence 335677899999998875
No 359
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=53.76 E-value=51 Score=27.34 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=54.7
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHH--HHHHhhcCCce-----EEEcc--------chHH
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHEL--AVSLAKSKIQT-----VLIPD--------SAMF 113 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~l--a~~L~~~GI~v-----~~I~d--------sav~ 113 (165)
..++++|-|.+..+...+....+ .++.+|++.+ |.+.+... ...+...|+++ .+.+. ..+-
T Consensus 128 ~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~--~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~ 205 (465)
T 3e9k_A 128 EKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEA--KAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDIL 205 (465)
T ss_dssp GGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEET--TCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHH
T ss_pred cCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcC--CcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHH
Confidence 35677776666555555555433 2345666653 55555332 23455577653 33332 2344
Q ss_pred Hhch----hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 114 GLIS----RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 114 ~~m~----~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
..+. +. ++++-...=.+.|.+. .. ..|+-+|+++++++++=
T Consensus 206 ~~i~~~~~~~-~lv~~~~~~n~tG~~~-~l--~~i~~la~~~g~~vi~D 250 (465)
T 3e9k_A 206 EVIEKEGDSI-AVILFSGVHFYTGQHF-NI--PAITKAGQAKGCYVGFD 250 (465)
T ss_dssp HHHHHHGGGE-EEEEEESBCTTTCBBC-CH--HHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCCCe-EEEEEeCcccCcceee-cH--HHHHHHHHHcCCEEEEE
Confidence 4443 23 3333333333445443 33 66888999999998863
No 360
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=53.62 E-value=63 Score=23.66 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=26.0
Q ss_pred chhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 116 ISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 116 m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+.+=|.+|+-+ ..| +..-+..++-.||+.+.|++.++..
T Consensus 111 ~~~~DvvI~iS----~SG---~t~~~i~~~~~ak~~g~~vI~IT~~ 149 (199)
T 1x92_A 111 GQPGDVLLAIS----TSG---NSANVIQAIQAAHDREMLVVALTGR 149 (199)
T ss_dssp CCTTCEEEEEC----SSS---CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCCEEEEEe----CCC---CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45556655432 224 2445677889999999999988753
No 361
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=53.56 E-value=41 Score=26.34 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 65 ELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 65 ~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
..++..+.++++.- ++.-..|.. -|..+++.|.+.|+++++|| -|++.++.
T Consensus 68 ~~i~~~~~~g~~V~-~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~ 121 (253)
T 4e16_A 68 DVMREGIENNKSVV-RLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAA 121 (253)
T ss_dssp HHHHHHHHTTCCEE-EEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHH
T ss_pred HHHHHHHHCCCcEE-EEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHH
Confidence 33444444566544 445788874 56788999999999999999 45554443
No 362
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=53.46 E-value=90 Score=25.41 Aligned_cols=118 Identities=8% Similarity=0.000 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHhccc--CC---------CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCc
Q psy2575 35 NPTSDTAPSQACEHI--HS---------NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQ 103 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I--~~---------~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~ 103 (165)
...++.|+++-.++. .. ..+++|-|.+..+...+.... ++.-+|++. .|.+.+.. ..+...|.+
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~--~p~y~~~~--~~~~~~g~~ 155 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLLD--EPAYSGTL--QSLHPLGCN 155 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-CTTCEEEEE--SSCCHHHH--HHHGGGTCE
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-CCCCEEEEe--CCCcHHHH--HHHHHcCCE
Confidence 466888887654422 22 356666665655555554433 333466665 46676643 345667888
Q ss_pred eEEEcc-------chHHHhch-------------hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 TVLIPD-------SAMFGLIS-------------RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 v~~I~d-------sav~~~m~-------------~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++. ..+...+. +...|++-...-.+.|.+...-=-..++-+|+++++++++
T Consensus 156 ~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 156 IINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp EEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 777753 12333333 2333333232223445555443334678889999988775
No 363
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=53.25 E-value=82 Score=24.88 Aligned_cols=99 Identities=9% Similarity=0.031 Sum_probs=56.3
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--------chHHHhch---hCC
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD--------SAMFGLIS---RVN 120 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d--------sav~~~m~---~v~ 120 (165)
..+++|-|.+..+...+..+.+ +.-+|++.+ |.+.+......+...|.++..++. ..+...++ +..
T Consensus 60 ~~v~~t~g~t~a~~~~~~~~~~-~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 136 (392)
T 2z9v_A 60 KPVILHGEPVLGLEAAAASLIS-PDDVVLNLA--SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEIT 136 (392)
T ss_dssp CCEEESSCTHHHHHHHHHHHCC-TTCCEEEEE--SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCC
T ss_pred CEEEEeCCchHHHHHHHHHhcC-CCCEEEEec--CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCc
Confidence 4566666666565555555433 334666664 444444344444557888877752 23334442 344
Q ss_pred EEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 121 KIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 121 ~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.|++ ...-.+.|.+.. -..++-+|+++++++++
T Consensus 137 ~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 169 (392)
T 2z9v_A 137 VVSV-CHHDTPSGTINP---IDAIGALVSAHGAYLIV 169 (392)
T ss_dssp EEEE-ESEEGGGTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEE-eccCCCCceecc---HHHHHHHHHHcCCeEEE
Confidence 4444 333344455443 35788889999998876
No 364
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=53.18 E-value=88 Score=25.20 Aligned_cols=118 Identities=12% Similarity=0.053 Sum_probs=66.1
Q ss_pred ChHHHHHHHHHHhcc----cCC-CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH----IHS-NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~-~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++...+. +.. ..+++|-|.+..+...+.... ++.-+|++.+ |.+.+... .+...|.++..++
T Consensus 77 ~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~-~~gd~Vl~~~--p~~~~~~~--~~~~~g~~~~~~~ 151 (412)
T 2x5d_A 77 IPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL-DHGDTILVPN--PSYPIHIY--GAVIAGAQVRSVP 151 (412)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHC-CTTCEEEEEE--SCCHHHHH--HHHHHTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhC-CCCCEEEEcC--CCchhHHH--HHHHcCCEEEEee
Confidence 356677888766432 233 467777776666665555443 3344666664 66666443 2345688777766
Q ss_pred cch----------HHHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DSA----------MFGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 dsa----------v~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
... +...+ ++...|++ ...-.+.|.+...---..++-+|+++++++++
T Consensus 152 ~~~~~~~~~d~~~l~~~i~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 152 LVPGIDFFNELERAIRESIPKPRMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp CSTTSCHHHHHHHHHHTEESCCSEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCccCCCCCHHHHHHhcccCceEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 321 11122 23455555 22223345544433335678889999998876
No 365
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=53.09 E-value=39 Score=22.67 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=39.4
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCc--eEEEccchHH-Hhc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHh-
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQ--TVLIPDSAMF-GLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ- 149 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~--v~~I~dsav~-~~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak- 149 (165)
+.+|+++|..|.. ...+...|.+.|.. +....+..-. ..+ .+.|.||+..+- ++ .-|.-.+..+-+
T Consensus 5 ~~~ILivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~lr~~ 76 (144)
T 3kht_A 5 SKRVLVVEDNPDD-IALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL--PI-----ANGFEVMSAVRKP 76 (144)
T ss_dssp CEEEEEECCCHHH-HHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC--GG-----GCHHHHHHHHHSS
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHhc
Confidence 4567777665542 23445666667766 4333332211 112 236777776542 22 223333333333
Q ss_pred --hCCCcEEEEeec
Q psy2575 150 --HYSIPYPCTFLL 161 (165)
Q Consensus 150 --~~~vPv~V~~~~ 161 (165)
..++|+++++..
T Consensus 77 ~~~~~~pii~~s~~ 90 (144)
T 3kht_A 77 GANQHTPIVILTDN 90 (144)
T ss_dssp STTTTCCEEEEETT
T ss_pred ccccCCCEEEEeCC
Confidence 356899888753
No 366
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=52.77 E-value=89 Score=25.45 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHhcc------cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHh-hcCCceEEE
Q psy2575 35 NPTSDTAPSQACEH------IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLA-KSKIQTVLI 107 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~------I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~I 107 (165)
...++.+++...+. +....+++|-|.+..+...+....+ +.-+|++.+ |.+.+.. ..+. ..|.++..+
T Consensus 89 ~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~-~gd~vl~~~--p~~~~~~--~~~~~~~g~~~~~~ 163 (435)
T 3piu_A 89 PAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD-PGEAVLIPT--PYYPGFD--RDLKWRTGVEIVPI 163 (435)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCC-TTCEEEEEE--SCCTTHH--HHTTTTTCCEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcC-CCCeEEECC--CccccHH--HHHHHhcCCEEEEe
Confidence 56788888776533 3356788888877666666655433 344666654 4444432 2334 578887776
Q ss_pred ccc----------hHHHhchh-------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 108 PDS----------AMFGLISR-------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 108 ~ds----------av~~~m~~-------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+-. .+-..+.+ ...|++.. .--+.|.+...---..++-+|+++++++++
T Consensus 164 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~-p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 229 (435)
T 3piu_A 164 HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTN-PSNPLGTTMTRNELYLLLSFVEDKGIHLIS 229 (435)
T ss_dssp ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEES-SCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcC-CCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 532 23333332 22333332 223446665555456677889999998876
No 367
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=52.76 E-value=28 Score=26.50 Aligned_cols=100 Identities=18% Similarity=0.134 Sum_probs=53.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.+|++.|.|.-+=..+.+....+..+|+++..+.......+.+.|.+.|-++.++. | ..+..++. +
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678888888766633333222224467887765333334456677777776666543 3 23444444 4
Q ss_pred CCEEEEccceeecCCC-------------eeehhcHHHHHHHHhhC
Q psy2575 119 VNKIIIGTHTVMANGG-------------LRSVCGTHAVALAAQHY 151 (165)
Q Consensus 119 v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~Ak~~ 151 (165)
+|.++--|-. ...+. -+|-.|+..+..++..+
T Consensus 100 ~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 100 LDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp EEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCEEEECCCC-CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5655544321 11111 13566777777666543
No 368
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=52.76 E-value=56 Score=22.83 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=52.0
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--h-HHH-hchhCCEEEEccc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--A-MFG-LISRVNKIIIGTH 127 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--a-v~~-~m~~v~~VllGAd 127 (165)
...|+.+|++..-..+.....+ ..++|.++|..|...-..+ ......|+++....-+ . +.. -+.++|.|++..+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~~~~~~~~~-~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ-RGQNVTVISNLPEDDIKQL-EQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCHHHHHHH-HHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCCEEEEECCChHHHHHH-HHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 3467778998766666665544 3467778877652111122 2233457666543211 1 222 2667888887653
Q ss_pred eeecCCCeeehhcHHHHHHHHhhC-CC-cEEE
Q psy2575 128 TVMANGGLRSVCGTHAVALAAQHY-SI-PYPC 157 (165)
Q Consensus 128 ~V~~nG~vvnk~GT~~lAl~Ak~~-~v-Pv~V 157 (165)
. ..-...++..|+.. +. ++++
T Consensus 81 ~---------d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 81 N---------DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp C---------HHHHHHHHHHHHHHTSSSCEEE
T ss_pred C---------hHHHHHHHHHHHHHCCCCEEEE
Confidence 2 23345677778775 43 4444
No 369
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=52.66 E-value=78 Score=25.59 Aligned_cols=102 Identities=17% Similarity=0.057 Sum_probs=55.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhc-CCceEEEcc-----chHHHhchhCCEEEEc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKS-KIQTVLIPD-----SAMFGLISRVNKIIIG 125 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~-GI~v~~I~d-----sav~~~m~~v~~VllG 125 (165)
+.+|++.|.+..+=..|.+....+.++|+++.-+|... .+..|.+. ++.+.. .| .++...+..+|.|+.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~l~~~~~v~~v~-~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---IAEELQAIPNVTLFQ-GPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---HHHHHHTSTTEEEEE-SCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh---hHHHHhhcCCcEEEE-CCccCCHHHHHHHHhcCCEEEEc
Confidence 45788888776664433332222446777765444432 23445543 444332 23 2356667888888754
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCC-CcEEEEeec
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYS-IPYPCTFLL 161 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~~~~ 161 (165)
+... + .-.|..| ..++-+|++.+ ++-+|...+
T Consensus 81 a~~~--~-~~~~~~~-~~l~~aa~~~g~v~~~V~~SS 113 (352)
T 1xgk_A 81 TTSQ--A-GDEIAIG-KDLADAAKRAGTIQHYIYSSM 113 (352)
T ss_dssp CCST--T-SCHHHHH-HHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCC--C-cHHHHHH-HHHHHHHHHcCCccEEEEeCC
Confidence 4221 1 1235555 77888888887 766665443
No 370
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=52.60 E-value=12 Score=28.70 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=36.2
Q ss_pred EEEecCCHHHHHHHHHHHhC-----CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc
Q psy2575 55 ILTLGYSKIVELFLKNAAQH-----RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS 110 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~-----~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds 110 (165)
++++..+++|+.|+....+. ++.+++++ |...++.|.+.|+++.++++.
T Consensus 175 ~v~ftS~s~v~~~~~~~~~~~~~~l~~~~~~ai-------G~~ta~~l~~~G~~~~~va~~ 228 (240)
T 3mw8_A 175 TIVVTSGEVLENLINLVPKDSFAWLRDCHIIVP-------SARVETQARKKGLRRVTNAGA 228 (240)
T ss_dssp EEECCSHHHHHHHHHHSCGGGHHHHHHSEEEES-------SHHHHHHHHHTTCCCEEECSS
T ss_pred EEEEcCHHHHHHHHHHcchHHHHHHhCCCEEEE-------CHHHHHHHHHcCCCceEeCCC
Confidence 45666677999988765331 24566666 888999999999998887763
No 371
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=52.55 E-value=18 Score=31.43 Aligned_cols=114 Identities=11% Similarity=-0.019 Sum_probs=57.4
Q ss_pred HHHHhcccCCCCEEEEecCCH---HHHHHHHHHHh-CCceEEEEecC-CC--C--------------ChHHHHHHHHhhc
Q psy2575 42 PSQACEHIHSNEIILTLGYSK---IVELFLKNAAQ-HRKFQCIVMEN-SP--E--------------NKGHELAVSLAKS 100 (165)
Q Consensus 42 a~~a~~~I~~~~~ILT~g~S~---tV~~~L~~A~~-~~~f~ViV~Es-~P--~--------------~eG~~la~~L~~~ 100 (165)
++.|.++|++|++|.+.+... .+.+.|.+..+ -++++++-.-+ .| . +.|..+ +++.+.
T Consensus 18 aeEAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~~l~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~i~~ 96 (434)
T 3eh7_A 18 AEEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGNS-RKAVEE 96 (434)
T ss_dssp HHHHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC-----------------------------
T ss_pred HHHHHHhCCCcCEEEECCccCCHHHHHHHHHHhHhhcCCeEEEEeccCCchhhcChhhhCeEEEecCcCCHHH-HHHHHC
Confidence 456778899999999986443 33333332222 24566663211 11 1 112222 222233
Q ss_pred C-CceEEEccchHHHhch----hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 101 K-IQTVLIPDSAMFGLIS----RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 101 G-I~v~~I~dsav~~~m~----~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
| ++..-+..+.+..++. ++|.+++.+...-.+|.+.-.. +...+..+.....-|++
T Consensus 97 G~~~~~p~~ls~~~~~~~~g~~~~DVAli~as~~D~~Gn~s~g~-s~~~~~~~~~~A~~VI~ 157 (434)
T 3eh7_A 97 NRADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSFGV-SCDYSKPAAESAHLVIG 157 (434)
T ss_dssp -CTTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEECTT-BCTTHHHHHHHCSEEEE
T ss_pred CCccccChhHHHHHHHHHhCCCCCcEEEEEEecCCCCCCEEecC-ccchHHHHHHhCCeEEE
Confidence 3 4443345666666665 4899999999999999886432 22333333343444444
No 372
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=52.54 E-value=34 Score=25.53 Aligned_cols=107 Identities=8% Similarity=0.083 Sum_probs=52.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------hC
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------RV 119 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~v 119 (165)
|.+|++.|.|+-+=..+......+..+|++...|.......+.+.+.+.|-++.++. | .++..++. ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 346777776665533332222224467776544443334455666665554554432 2 23333443 46
Q ss_pred CEEEEccceeecCCC-------------eeehhcHHHHHHHHhhC----CCcEEEEe
Q psy2575 120 NKIIIGTHTVMANGG-------------LRSVCGTHAVALAAQHY----SIPYPCTF 159 (165)
Q Consensus 120 ~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~Ak~~----~vPv~V~~ 159 (165)
|.++--|- +...+. -+|-.|+..+...+..+ +.+-+|..
T Consensus 81 d~li~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 136 (244)
T 1edo_A 81 DVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI 136 (244)
T ss_dssp SEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEECCC-CCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 77665542 222211 13566777777666542 44444443
No 373
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=52.52 E-value=58 Score=25.58 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHH--hCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc--
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAA--QHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~--~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds-- 110 (165)
...++.+++ ++.-..+++|-|.+..+...+..+. -++.-+|++. .|.+.+...+ +...|.++..++..
T Consensus 35 ~~l~~~la~----~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~ 106 (375)
T 2fnu_A 35 LLFEEALCE----FLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITT--PISFVATANM--LLESGYTPVFAGIKND 106 (375)
T ss_dssp HHHHHHHHH----HHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC--SSSCTHHHHH--HHHTTCEEEECCBCTT
T ss_pred HHHHHHHHH----HhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC--CCccHhHHHH--HHHCCCEEEEeccCCC
Confidence 344555554 4433356666666655555555541 2233466665 3555554433 33478888777632
Q ss_pred ------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-..+.+-.++++-.+. .|.+ .. -..++-+|+++++++++
T Consensus 107 ~~~d~~~l~~~i~~~~~~v~~~~~---tG~~-~~--l~~i~~l~~~~~~~li~ 153 (375)
T 2fnu_A 107 GNIDELALEKLINERTKAIVSVDY---AGKS-VE--VESVQKLCKKHSLSFLS 153 (375)
T ss_dssp SSBCGGGSGGGCCTTEEEEEEECG---GGCC-CC--HHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHhhcCcCceEEEEeCC---cCCc-cC--HHHHHHHHHHcCCEEEE
Confidence 122222221233332222 3433 33 35788889999998876
No 374
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=52.44 E-value=85 Score=24.80 Aligned_cols=111 Identities=9% Similarity=0.038 Sum_probs=60.0
Q ss_pred HHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---chHHH
Q psy2575 38 SDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---SAMFG 114 (165)
Q Consensus 38 ~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---sav~~ 114 (165)
.+.+.+..++++...+.|++-+.+..+...+... -++.-+|++. .|.+.+ ....++..|.++..++. ..+..
T Consensus 90 ~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~-~~~gd~v~~~--~~~~~~--~~~~~~~~g~~~~~~~~~d~~~l~~ 164 (399)
T 3tqx_A 90 HKELEKDISEFLGTDDTILYSSCFDANGGLFETL-LGPEDAIISD--ELNHAS--IIDGIRLCKAQRYRYKNNAMGDLEA 164 (399)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHH-CCTTCEEEEE--TTCCHH--HHHHHHSCCSEEEEECTTCTTHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHh-cCCCCEEEEC--CcccHH--HHHHHHHcCCceeEeCCCCHHHHHH
Confidence 3344444444554445565555454444344333 2444456654 355544 33456667888877762 34444
Q ss_pred hchh-------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 115 LISR-------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 115 ~m~~-------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+.+ ...|++.. .-.+.|.+.. -..++-+|+++++++++
T Consensus 165 ~l~~~~~~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 165 KLKEADEKGARFKLIATDG-VFSMDGIIAD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp HHHHHHTTTCSSEEEEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred HHHhhhccCCCceEEEEeC-CCCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 4543 33444332 3344554444 46788899999998876
No 375
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=52.41 E-value=64 Score=27.42 Aligned_cols=113 Identities=6% Similarity=-0.009 Sum_probs=59.9
Q ss_pred HHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHH-H-HHHhhcCCceEEEccc---h
Q psy2575 37 TSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHEL-A-VSLAKSKIQTVLIPDS---A 111 (165)
Q Consensus 37 ~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~l-a-~~L~~~GI~v~~I~ds---a 111 (165)
.++.+.+..+++....+.+++-+.+..+..++ ... ++.-+|++.+ |.+.+..- . ..+...|+++..++.. .
T Consensus 134 ~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l-~~~-~~Gd~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~ 209 (464)
T 1ibj_A 134 TRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLI-KNGEEIVAGD--DVYGGSDRLLSQVVPRSGVVVKRVNTTKLDE 209 (464)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH-TTS-CTTCEEEEES--SCCHHHHHHHHHTSGGGTCEEEEECTTSHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEECCHHHHHHHHH-HHh-CCCCEEEEEC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence 45566666666665445666644443333233 222 3445677654 55555432 2 2345679999888743 2
Q ss_pred HHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 112 MFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 112 v~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+...+. +...|++ ..---+.|.+. . -..++-+|+++++++++
T Consensus 210 l~~~i~~~tk~v~l-~~p~NptG~v~-~--l~~i~~la~~~gi~liv 252 (464)
T 1ibj_A 210 VAAAIGPQTKLVWL-ESPTNPRQQIS-D--IRKISEMAHAQGALVLV 252 (464)
T ss_dssp HHHHCCSSEEEEEE-CSSCTTTCCCC-C--HHHHHHHHHTTTCEEEE
T ss_pred HHHHhccCceEEEE-eCCCCCCCEee-c--HHHHHHHHHHcCCEEEE
Confidence 333333 2333333 22222234444 2 35688889999998876
No 376
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=52.39 E-value=49 Score=22.19 Aligned_cols=79 Identities=8% Similarity=-0.021 Sum_probs=48.0
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcC-CceEEEccch-HHHhc----hhCCEEEEccceeecCCCeeehhcHHHHHHHH
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSK-IQTVLIPDSA-MFGLI----SRVNKIIIGTHTVMANGGLRSVCGTHAVALAA 148 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~G-I~v~~I~dsa-v~~~m----~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A 148 (165)
++.+|+++|..|.. ...+...|.+.| +.+....+.. ....+ ...|.||+..+ +++ .-|--.+..+-
T Consensus 19 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~--l~~-----~~g~~~~~~l~ 90 (146)
T 4dad_A 19 GMINILVASEDASR-LAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGA--ALD-----TAELAAIEKLS 90 (146)
T ss_dssp GGCEEEEECSCHHH-HHHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECT--TCC-----HHHHHHHHHHH
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCC--CCC-----ccHHHHHHHHH
Confidence 56788888877653 234567788888 8888777665 22222 34788887654 222 23443443333
Q ss_pred hh-CCCcEEEEeec
Q psy2575 149 QH-YSIPYPCTFLL 161 (165)
Q Consensus 149 k~-~~vPv~V~~~~ 161 (165)
+. ..+|+++++..
T Consensus 91 ~~~~~~~ii~lt~~ 104 (146)
T 4dad_A 91 RLHPGLTCLLVTTD 104 (146)
T ss_dssp HHCTTCEEEEEESC
T ss_pred HhCCCCcEEEEeCC
Confidence 33 46899988753
No 377
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=52.11 E-value=53 Score=24.62 Aligned_cols=110 Identities=11% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcC-CceEEEc-c------chHHHhch-----
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSK-IQTVLIP-D------SAMFGLIS----- 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~G-I~v~~I~-d------sav~~~m~----- 117 (165)
.|.++++.|.|+-+=..+....-.+..+|+++..++ ....++...|.+.+ -++.++. | ..+..++.
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE-ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 467888888777664333322222456787775433 33445667776655 3333322 1 12223332
Q ss_pred --hCCEEEEccceeecCCC-------------eeehhcHHHHHHHH----hhCCCcEEEEeec
Q psy2575 118 --RVNKIIIGTHTVMANGG-------------LRSVCGTHAVALAA----QHYSIPYPCTFLL 161 (165)
Q Consensus 118 --~v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~~~~ 161 (165)
++|.++--|-.....+. -+|-.|++.+...+ +..+.+.+|...+
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS 154 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSS 154 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECC
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 57877766643222221 14667888887776 4445555555443
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=52.02 E-value=59 Score=25.49 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=32.0
Q ss_pred cCCCCEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceE
Q psy2575 49 IHSNEIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTV 105 (165)
Q Consensus 49 I~~~~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~ 105 (165)
++.|++|+++|.|..+=. .+..|+. ...+|+++++.+.. +++++. .|.+..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~-~Ga~Vi~~~~~~~~--~~~~~~---~ga~~~ 174 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARA-MGLRVLAAASRPEK--LALPLA---LGAEEA 174 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH-TTCEEEEEESSGGG--SHHHHH---TTCSEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHH--HHHHHh---cCCCEE
Confidence 789999999998655533 4444433 34589988876653 234443 465543
No 379
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=51.88 E-value=45 Score=26.99 Aligned_cols=120 Identities=8% Similarity=0.031 Sum_probs=71.3
Q ss_pred HHHHHHhcccCCC-CEEEEecCCHHHHHHHHHHHhCCceE--EEEecC--CCCCh----H---HHHHHHHhhcCCceEEE
Q psy2575 40 TAPSQACEHIHSN-EIILTLGYSKIVELFLKNAAQHRKFQ--CIVMEN--SPENK----G---HELAVSLAKSKIQTVLI 107 (165)
Q Consensus 40 ~Ia~~a~~~I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~--ViV~Es--~P~~e----G---~~la~~L~~~GI~v~~I 107 (165)
.+++.-+.+-..| .+|++||..+.+...+....-..+|. .-+++. -+.-+ | ..+...|++.|+++.-+
T Consensus 54 ~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~ln~~i~~~L~~~G~~a~~l 133 (279)
T 3l86_A 54 DFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNLQEKLRQAGVSCQQL 133 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTTHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 3444433444444 67999999888877776553223332 011111 00011 1 44677888999887654
Q ss_pred c---------------------------cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 108 P---------------------------DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 108 ~---------------------------dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
+ -..+..++..=..+++...++-.+|...|--+=...+.+|...+-..+++.
T Consensus 134 ~g~dg~llta~~~~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~Liil 212 (279)
T 3l86_A 134 KSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILM 212 (279)
T ss_dssp SGGGGGTEEEEESCHHHHBSBEEEEEECHHHHHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEE
T ss_pred ecCcCCEEEeeccCccccCcccccchhhHHHHHHHHhCCcEEEECCcEECCCCCEeecCHHHHHHHHHHHcCCCEEEEE
Confidence 2 123344455555777777777788888886666777788888887755543
No 380
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=51.85 E-value=1.1e+02 Score=26.25 Aligned_cols=115 Identities=13% Similarity=0.054 Sum_probs=62.4
Q ss_pred HHHHHHHHhcccC----CCCEEEEecCCHHHHHHHHHHHh---------C----CceEEEEecCCCCChHHHHHHHHhhc
Q psy2575 38 SDTAPSQACEHIH----SNEIILTLGYSKIVELFLKNAAQ---------H----RKFQCIVMENSPENKGHELAVSLAKS 100 (165)
Q Consensus 38 ~~~Ia~~a~~~I~----~~~~ILT~g~S~tV~~~L~~A~~---------~----~~f~ViV~Es~P~~eG~~la~~L~~~ 100 (165)
.+.+.+...+++. ....++|-|.+..+...|..+.+ | .+..|++.+.. ... +.+...-.
T Consensus 137 e~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~--H~s--~~~~~~~~ 212 (511)
T 3vp6_A 137 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQS--HYS--IKKAGAAL 212 (511)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTS--CTH--HHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCc--hHH--HHHHHHHc
Confidence 3445555455442 24677777766655555544432 2 35567766532 222 23333444
Q ss_pred CC---ceEEEccc--------hHHHhchhC------CEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 101 KI---QTVLIPDS--------AMFGLISRV------NKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 101 GI---~v~~I~ds--------av~~~m~~v------~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
|+ ++..++.. .+-..+.+- .++++....-...|.+ ... ..|+-+|++|+++++|=+
T Consensus 213 g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-d~l--~~I~~ia~~~~~~lhvD~ 285 (511)
T 3vp6_A 213 GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DPI--QEIADICEKYNLWLHVDA 285 (511)
T ss_dssp TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB-CCH--HHHHHHHHHHTCEEEEEE
T ss_pred CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc-ccH--HHHHHHHHHcCCEEEEEc
Confidence 55 78888632 233344332 4455544333445544 443 568889999999998744
No 381
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=51.84 E-value=47 Score=25.77 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=55.0
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.++++.|.|+-+=..+......+..+|+++..++ .....+++.|.+.|-++..+. | .++..++. +
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE-EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 467888888887664433332222456788876443 233456677777676655442 3 22333333 4
Q ss_pred CCEEEEccceeecCCC-------------eeehhcHHHHHHHHhhC
Q psy2575 119 VNKIIIGTHTVMANGG-------------LRSVCGTHAVALAAQHY 151 (165)
Q Consensus 119 v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~Ak~~ 151 (165)
+|.++--|- +...+. -+|-.|++.++.++..+
T Consensus 100 iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 100 VDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp CSEEEECCC-CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence 677765552 222221 13667888877776554
No 382
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=51.83 E-value=12 Score=31.41 Aligned_cols=77 Identities=10% Similarity=0.185 Sum_probs=45.3
Q ss_pred cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccce
Q psy2575 49 IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 49 I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~ 128 (165)
..++.+|++.|.+..-..+...+++ ..++|++++ .|.....+++... .-+...+....++..+.+++|.+..+.+.
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~-lG~~v~~~d-~~~~p~~~~ad~~--~~~~~~~~d~~~l~~~a~~~d~i~~e~e~ 96 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANR-LNIQVNVLD-ADNSPAKQISAHD--GHVTGSFKEREAVRQLAKTCDVVTAEIEH 96 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEEE-STTCTTGGGCCSS--CCEESCTTCHHHHHHHHTTCSEEEESSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEE-CCCCcHHHhcccc--ceeecCCCCHHHHHHHHHhCCEEEECCCC
Confidence 3567899999999877777777765 457788777 5554333332210 11111122234556666778877766554
Q ss_pred e
Q psy2575 129 V 129 (165)
Q Consensus 129 V 129 (165)
+
T Consensus 97 ~ 97 (403)
T 3k5i_A 97 V 97 (403)
T ss_dssp S
T ss_pred C
Confidence 3
No 383
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=51.80 E-value=73 Score=23.88 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=46.0
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhh-
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH- 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~- 150 (165)
...+|+++|..|.. ...+...|...|+.|....+..-.. .+ ...|.|++..+ ++++ -|--.+..+-+.
T Consensus 22 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~--lp~~-----~g~~~~~~lr~~~ 93 (250)
T 3r0j_A 22 PEARVLVVDDEANI-VELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVX--MPGM-----DGFGVLRRLRADG 93 (250)
T ss_dssp SSCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESC--CSSS-----CHHHHHHHHHHTT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEEeCC--CCCC-----CHHHHHHHHHhcC
Confidence 45788888877653 2345667777888877665543222 22 23788887543 3432 243344443333
Q ss_pred CCCcEEEEeec
Q psy2575 151 YSIPYPCTFLL 161 (165)
Q Consensus 151 ~~vPv~V~~~~ 161 (165)
.++|+++++..
T Consensus 94 ~~~~ii~lt~~ 104 (250)
T 3r0j_A 94 IDAPALFLTAR 104 (250)
T ss_dssp CCCCEEEEECS
T ss_pred CCCCEEEEECC
Confidence 46899988754
No 384
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=51.52 E-value=62 Score=22.93 Aligned_cols=66 Identities=5% Similarity=0.056 Sum_probs=36.7
Q ss_pred HHHHhhcCCc-eEEE--ccchHHHhc-----hhCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEeeccc
Q psy2575 94 AVSLAKSKIQ-TVLI--PDSAMFGLI-----SRVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTFLLNI 163 (165)
Q Consensus 94 a~~L~~~GI~-v~~I--~dsav~~~m-----~~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~~~~~ 163 (165)
.+.+.+.|++ ++.. .......++ .++|.+++|+..- +++-. -.|+..- -+.++.++||+|+-+-..
T Consensus 87 ~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~---~~~~~~~lGSva~-~vl~~a~~PVlvV~~~~~ 161 (163)
T 1tq8_A 87 KERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGL---STIAGRLLGSVPA-NVSRRAKVDVLIVHTTEG 161 (163)
T ss_dssp HHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCC---CSHHHHHTBBHHH-HHHHHTTCEEEEECCC--
T ss_pred HHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCC---CcccceeeccHHH-HHHHhCCCCEEEEeCCCC
Confidence 4456667887 5533 332222232 3599999998742 22211 2455433 344567899999865443
No 385
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=51.51 E-value=46 Score=27.51 Aligned_cols=121 Identities=16% Similarity=0.055 Sum_probs=56.7
Q ss_pred CChHHHHHHHHHHhcccC-CCCEEEEecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHH-HHHh--------hc
Q psy2575 33 FANPTSDTAPSQACEHIH-SNEIILTLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELA-VSLA--------KS 100 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~-~~~~ILT~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la-~~L~--------~~ 100 (165)
+....++.+++.-.++.. ...+++|-|.+..+...+..|+. ++ -+|++.+ |.+.|.... ..+. ..
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~--~~yhg~~~~~~~~~~~~~~~~~~~ 170 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGR-RMILRFE--GHYHGWHDFSASGYNSHFDGQPAP 170 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCC-CEEEEEC--C-----------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEc--CCcCCCchhhHhhcCCccCCCcCC
Confidence 345667777776666653 33466666666666666665432 44 3778777 555554331 1111 13
Q ss_pred CCc------eEEEcc---chHHHhchh---CCEEEEccceeecCCC-eeehhc-HHHHHHHHhhCCCcEEE
Q psy2575 101 KIQ------TVLIPD---SAMFGLISR---VNKIIIGTHTVMANGG-LRSVCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 101 GI~------v~~I~d---sav~~~m~~---v~~VllGAd~V~~nG~-vvnk~G-T~~lAl~Ak~~~vPv~V 157 (165)
|++ +..++. ..+-..+.+ -.++++ .+-+..++| ++...+ -..++-+|++|++++++
T Consensus 171 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~ 240 (453)
T 2cy8_A 171 GVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFI-AEPVGSHFGVTPVSDSFLREGAELARQYGALFIL 240 (453)
T ss_dssp -----CGGGEEEECTTCHHHHHHHHHHHGGGEEEEE-ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 542 334331 233344442 112222 333444434 333233 24577889999998775
No 386
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=51.45 E-value=21 Score=27.43 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=34.2
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
-++++..+++|+.|+....-..+.+++++ |...++.|.+.|+++. +++
T Consensus 163 d~v~ftS~s~v~~~~~~~~~~~~~~~~aI-------G~~Ta~~l~~~G~~v~-va~ 210 (229)
T 3p9z_A 163 SILIFTAISHAKAFLHYFEFLENYTAISI-------GNTTALYLQEQGIPSY-IAK 210 (229)
T ss_dssp CEEEECSHHHHHHHHHHSCCCTTCEEEES-------SHHHHHHHHHTTCCEE-ECS
T ss_pred eEEEEECHHHHHHHHHHhCcccCCEEEEE-------CHHHHHHHHHcCCCce-eCC
Confidence 45666667799998876522234556655 8899999999999875 554
No 387
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=51.39 E-value=34 Score=28.93 Aligned_cols=69 Identities=10% Similarity=0.010 Sum_probs=45.0
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd 127 (165)
+..|+.+|...+=......++ .+..+|.+.|+++...|. ..|. .|+++.+-... ...+..+|.|+++..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~-~~G~~v~~~D~~~~~~~~---~~l~-~G~~~~~g~~~--~~~~~~~d~vV~s~g 73 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFL-ARGVTPRVMDTRMTPPGL---DKLP-EAVERHTGSLN--DEWLMAADLIVASPG 73 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHH-TTTCCCEEEESSSSCTTG---GGSC-TTSCEEESSCC--HHHHHTCSEEEECTT
T ss_pred CCEEEEEeecHHHHHHHHHHH-hCCCEEEEEECCCCcchh---HHhh-CCCEEEECCCc--HHHhccCCEEEeCCC
Confidence 456788877765444443333 467889999998876554 4466 79988755432 233447888888764
No 388
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=51.24 E-value=85 Score=24.46 Aligned_cols=104 Identities=12% Similarity=0.122 Sum_probs=63.8
Q ss_pred HhcccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecC---------CCC---------ChHHHHHHHHhhc--CCc
Q psy2575 45 ACEHIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMEN---------SPE---------NKGHELAVSLAKS--KIQ 103 (165)
Q Consensus 45 a~~~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es---------~P~---------~eG~~la~~L~~~--GI~ 103 (165)
+.+.++ +..|+.+|-+.+=..++..... |-. ++.++|. |.. .....++++|++. +++
T Consensus 22 ~q~~l~-~~~VlvvG~GglG~~va~~La~~Gvg-~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~ 99 (251)
T 1zud_1 22 GQQKLL-DSQVLIIGLGGLGTPAALYLAGAGVG-TLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQ 99 (251)
T ss_dssp HHHHHH-TCEEEEECCSTTHHHHHHHHHHTTCS-EEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSE
T ss_pred HHHHHh-cCcEEEEccCHHHHHHHHHHHHcCCC-eEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCE
Confidence 333443 4578888877655555555544 422 3444432 222 2335567777764 567
Q ss_pred eEEEc----cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 104 TVLIP----DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 104 v~~I~----dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
++.+. +..+..+++++|.|+-..|.. .--+.+.-.|+.+++|++..+
T Consensus 100 v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~---------~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 100 LTALQQRLTGEALKDAVARADVVLDCTDNM---------ATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSH---------HHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccCCHHHHHHHHhcCCEEEECCCCH---------HHHHHHHHHHHHhCCCEEEEe
Confidence 77654 234566788899999887642 124577788889999988764
No 389
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=51.14 E-value=12 Score=30.83 Aligned_cols=41 Identities=12% Similarity=0.197 Sum_probs=30.7
Q ss_pred ccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCCh
Q psy2575 48 HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENK 89 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~e 89 (165)
.+..+.+|++.|.+..-..+...+++ ..++|++++..|...
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~-~G~~vi~~d~~~~~~ 50 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKE-MGYKIAVLDPTKNSP 50 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSTTCT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHH-cCCEEEEEeCCCCCc
Confidence 45678999999999876667666654 568888888766543
No 390
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=51.08 E-value=85 Score=24.39 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=58.9
Q ss_pred HHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHHh---CCceEEEEecCCCCChHH-HHHHHHhhcCCceEEEccc--
Q psy2575 39 DTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAAQ---HRKFQCIVMENSPENKGH-ELAVSLAKSKIQTVLIPDS-- 110 (165)
Q Consensus 39 ~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~~---~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~ds-- 110 (165)
+.+.+..++++.- ..+++|-|.+..+...+..... ++.-+|++.+ |.+.+. ..+..+...|+++..++..
T Consensus 46 ~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 123 (382)
T 4hvk_A 46 QEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKY 123 (382)
T ss_dssp HHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEET--TCCHHHHHHHHHHHHTTCEEEEECBCTT
T ss_pred HHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECC--CCcHHHHHHHHHHHhcCCEEEEeccCCC
Confidence 3444444445542 2456665555454444443331 3445677663 334343 2345566789999888743
Q ss_pred ------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-..+.+-.++++-...-.+.|.+.. --.++-+|+++++ +++
T Consensus 124 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 124 GEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp SCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEE
T ss_pred CCcCHHHHHHHhccCceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEE
Confidence 222333322344443333334454433 3468888999998 665
No 391
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=50.99 E-value=96 Score=27.14 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=56.2
Q ss_pred HHHHhcccCCCCEEEEecC-----CHHHHHHHHH-HHh----CC--ceEEEEecC-CCCChHHH----------------
Q psy2575 42 PSQACEHIHSNEIILTLGY-----SKIVELFLKN-AAQ----HR--KFQCIVMEN-SPENKGHE---------------- 92 (165)
Q Consensus 42 a~~a~~~I~~~~~ILT~g~-----S~tV~~~L~~-A~~----~~--~f~ViV~Es-~P~~eG~~---------------- 92 (165)
++.|.++|++|++|...|+ -..+...|.+ +.+ +. .++++...+ .|..+++.
T Consensus 17 aeEAv~~IkdGd~V~~~Gf~~~G~P~~L~~ALa~R~~~~~~~g~~~~i~l~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~ 96 (514)
T 4eu9_A 17 AETASELIKHGDVVGTSGFTGAGYPKEVPKALAQRMEAAHDRGEKYQISLITGASTGPQLDGELAKANGVYFRSPFNTDA 96 (514)
T ss_dssp HHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHHHHTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCH
T ss_pred HHHHHHhCCCCCEEEECCCCCCcCHHHHHHHHHHHHHHhhcCCcceeEEEEEecCcCcccccccccCCCEEEEEecCCCH
Confidence 4667789999999999753 2345555543 222 32 344443332 33333211
Q ss_pred HHHHHhhcC-CceEEEccchHHHhc-----hhCCEEEEccceeecCCCeee
Q psy2575 93 LAVSLAKSK-IQTVLIPDSAMFGLI-----SRVNKIIIGTHTVMANGGLRS 137 (165)
Q Consensus 93 la~~L~~~G-I~v~~I~dsav~~~m-----~~v~~VllGAd~V~~nG~vvn 137 (165)
-.+++.+.| ++...+..+.++..+ .++|..++-+...-.+|.+.-
T Consensus 97 ~~R~~i~~G~~~y~p~~ls~~~~~~~~~~~~~iDVAlI~as~~De~Gnis~ 147 (514)
T 4eu9_A 97 TMRNRINAGETEYFDNHLGQVAGRAVQGNYGKFNIALVEATAITEDGGIVP 147 (514)
T ss_dssp HHHHHHHTTSSEECCCCGGGHHHHHHHTTTCCCCEEEEEEEEECTTCCEEE
T ss_pred HHHHHHHcCCeeEECccccchHHHHHhccCCCceEEEEEEEcCCCCceEEe
Confidence 123444455 444444556665433 358999999999999999864
No 392
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=50.91 E-value=69 Score=24.42 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=52.4
Q ss_pred HHHHHHHhcccCC-CCEEEEecCCHHHHHHHHHHHh----CCceEEEEec---CC----CCChHHHHHHHHhh-cCCceE
Q psy2575 39 DTAPSQACEHIHS-NEIILTLGYSKIVELFLKNAAQ----HRKFQCIVME---NS----PENKGHELAVSLAK-SKIQTV 105 (165)
Q Consensus 39 ~~Ia~~a~~~I~~-~~~ILT~g~S~tV~~~L~~A~~----~~~f~ViV~E---s~----P~~eG~~la~~L~~-~GI~v~ 105 (165)
+..+++-.+.+++ ++ ++.+++++|...++....+ -++.+++-++ +- |...-..+.+.|.+ .+++..
T Consensus 15 ~~aA~~l~~~i~~~~~-~i~ls~G~T~~~~~~~L~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~~~~l~~~~~~~~~ 93 (234)
T 2ri0_A 15 KVAFRMLEEEITFGAK-TLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKS 93 (234)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTTTTSCCSEE
T ss_pred HHHHHHHHHHHHhCCC-EEEEcCCCCHHHHHHHHHhcCCChhheEEEeCeeecCCCCCChHHHHHHHHHHHhccCCCcHh
Confidence 3444444455554 45 7788888888888777654 2456777555 22 33334455666665 588888
Q ss_pred EEccchH----------HHhc--hhCCEEEEcc
Q psy2575 106 LIPDSAM----------FGLI--SRVNKIIIGT 126 (165)
Q Consensus 106 ~I~dsav----------~~~m--~~v~~VllGA 126 (165)
++++... ...+ ...|.+++|.
T Consensus 94 ~~~~~~~~~~~~~~~~y~~~i~~~~~Dl~llGi 126 (234)
T 2ri0_A 94 YLPNGLAADLAKETEYYDQILAQYPIDLQILGI 126 (234)
T ss_dssp ECCCTTCSCHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhCCCCEEEEcc
Confidence 8775421 1112 2589999885
No 393
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=50.87 E-value=39 Score=27.14 Aligned_cols=97 Identities=11% Similarity=0.151 Sum_probs=54.8
Q ss_pred CCEEEEecCC---HHHHHHHH---HHHh-CCceEEEEecCCCCChH----HHHHHHHhhcCCc---------eE---EEc
Q psy2575 52 NEIILTLGYS---KIVELFLK---NAAQ-HRKFQCIVMENSPENKG----HELAVSLAKSKIQ---------TV---LIP 108 (165)
Q Consensus 52 ~~~ILT~g~S---~tV~~~L~---~A~~-~~~f~ViV~Es~P~~eG----~~la~~L~~~GI~---------v~---~I~ 108 (165)
..+|+..|+- .-+..++. ...+ ..+++++++-..|...+ ..+.+...+.|++ +. .++
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 3456666652 23333333 2222 45677666644443322 3344444557776 22 244
Q ss_pred cchHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 109 DSAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 109 dsav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
+..+..++..+|.+++.+. .+ | .| ...+=|-..++||++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~--~E-~-----~~--~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSS--GE-G-----FG--LCSAEGAVLGKPLIIS 303 (413)
T ss_dssp HHHHHHHHHHCSEEEECCS--CC-S-----SC--HHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCC--cC-C-----CC--cHHHHHHHcCCCEEEc
Confidence 5689999999999998653 12 2 12 2345677789999874
No 394
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=50.55 E-value=16 Score=28.71 Aligned_cols=41 Identities=20% Similarity=0.303 Sum_probs=24.8
Q ss_pred hHHHHHHHHhhcCCceEEEccch---HHHhchhCCEEEEcccee
Q psy2575 89 KGHELAVSLAKSKIQTVLIPDSA---MFGLISRVNKIIIGTHTV 129 (165)
Q Consensus 89 eG~~la~~L~~~GI~v~~I~dsa---v~~~m~~v~~VllGAd~V 129 (165)
.|+.+++.|.+.|+++..+.... ...-+.++|.|+.+.+.-
T Consensus 23 s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~D~v~~~~~~~ 66 (307)
T 3r5x_A 23 TGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHGK 66 (307)
T ss_dssp HHHHHHHHSCTTTEEEEEEECSSGGGHHHHTTTCSEEEECCCSH
T ss_pred HHHHHHHHHHHCCCEEEEEcccCchhHHHhccCCCEEEEeCCCC
Confidence 35566777777777776665432 122235678888876553
No 395
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=50.53 E-value=18 Score=29.43 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=20.6
Q ss_pred CCCEEEEecCCHHHHHHHHHHHh-CCceEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQ-HRKFQCI 80 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~-~~~f~Vi 80 (165)
.|..|+++|.+.....-+....+ |.+.+|+
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtVi 42 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLV 42 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEE
Confidence 47889999999877666655555 5544444
No 396
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.06 E-value=22 Score=28.51 Aligned_cols=40 Identities=10% Similarity=0.157 Sum_probs=30.8
Q ss_pred ccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCC
Q psy2575 48 HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPE 87 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~ 87 (165)
.++.|++|+++|-+........-++.-...+|+++++.|.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~ 199 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD 199 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH
Confidence 4678999999999987777666665534568999987764
No 397
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=50.03 E-value=99 Score=24.84 Aligned_cols=118 Identities=8% Similarity=-0.172 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHhcccCCC---CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc--
Q psy2575 35 NPTSDTAPSQACEHIHSN---EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD-- 109 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~---~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d-- 109 (165)
...++.+++.....-... .+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++.
T Consensus 82 ~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~-~~gd~Vl~~~--p~~~~~~--~~~~~~g~~~~~~~~~~ 156 (413)
T 3t18_A 82 KDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYL-DEGDPLICHD--YYWAPYR--KICEEFGRNFKTFEFFT 156 (413)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHC-CSSCEEEEES--SCCTHHH--HHHHHHTCEEEEECCBC
T ss_pred HHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhc-CCCCEEEECC--CCcccHH--HHHHHhCCeEEEeeccC
Confidence 566888887654433233 56777666656555555443 3344677664 5655543 334456887777763
Q ss_pred c-------hHHHhch-----hCCEEEEccce-eecCCCeeehhcHHHHHHHHh------hCCCcEEE
Q psy2575 110 S-------AMFGLIS-----RVNKIIIGTHT-VMANGGLRSVCGTHAVALAAQ------HYSIPYPC 157 (165)
Q Consensus 110 s-------av~~~m~-----~v~~VllGAd~-V~~nG~vvnk~GT~~lAl~Ak------~~~vPv~V 157 (165)
. .+...+. +...+++=..- --+.|.+...---..++-.|+ ++++++++
T Consensus 157 ~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 157 DDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 1 2223333 23323333222 255677777766677777777 78877765
No 398
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=50.01 E-value=58 Score=22.16 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=22.8
Q ss_pred hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 118 RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
++|.+++|+..-- ++-.-.|+..- -+.++.++||+++=+
T Consensus 109 ~~dliV~G~~~~~---~~~~~~Gs~~~-~vl~~~~~pVlvv~~ 147 (150)
T 3tnj_A 109 NVDLIVVGSHGRH---GLALLLGSTAN-SVLHYAKCDVLAVRL 147 (150)
T ss_dssp TCSEEEEEEC-----------CCCHHH-HHHHHCSSEEEEEEC
T ss_pred CCCEEEEecCCCC---CcCeEecchHH-HHHHhCCCCEEEEeC
Confidence 6999999987632 22233465443 345667899998744
No 399
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=49.93 E-value=91 Score=24.42 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=56.4
Q ss_pred CCEEEEecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc---------chHHHhch--h
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD---------SAMFGLIS--R 118 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d---------sav~~~m~--~ 118 (165)
..+++|-|.+..+...+..... ++.-+|++.++. .+ +..+...+...|.++..++. ..+...+. +
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~-~~-~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 137 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTG-TF-SDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS 137 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSS-HH-HHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCC-cc-hHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCC
Confidence 3567777777776666665531 234467776532 22 22223456668988887763 12333343 3
Q ss_pred CCEEEEccceeecCCCeeehhcHHHHHHHHhhC--CCcEEE
Q psy2575 119 VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY--SIPYPC 157 (165)
Q Consensus 119 v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V 157 (165)
...|++ ...-.+.|.+.. -..++-+|+++ ++++++
T Consensus 138 ~~~v~~-~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 138 YGAVTV-THVDTSTAVLSD---LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp CSEEEE-ESEETTTTEECC---HHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEE-EccCCCcCeEcC---HHHHHHHHHhhCCCCEEEE
Confidence 444444 333334454443 34788888998 888776
No 400
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=49.93 E-value=91 Score=24.65 Aligned_cols=106 Identities=8% Similarity=-0.017 Sum_probs=49.3
Q ss_pred CEEEEecCCHHHHH-HHHHHHhCCceEEEEecCCCCChHHHHHHHHhh----cCCceEEEc-----cchHHHhchh--CC
Q psy2575 53 EIILTLGYSKIVEL-FLKNAAQHRKFQCIVMENSPENKGHELAVSLAK----SKIQTVLIP-----DSAMFGLISR--VN 120 (165)
Q Consensus 53 ~~ILT~g~S~tV~~-~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~----~GI~v~~I~-----dsav~~~m~~--v~ 120 (165)
.+||+.|.+.-+=. +.....+ +..+|+++..++......-...+.+ .+-.+.++. ..++..++.. +|
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLE-KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 46788887665533 3333333 3468888765443211111122211 122333332 2345555655 57
Q ss_pred EEEEccceeecCCC--------eeehhcHHHHHHHHhhCCC---cEEEEe
Q psy2575 121 KIIIGTHTVMANGG--------LRSVCGTHAVALAAQHYSI---PYPCTF 159 (165)
Q Consensus 121 ~VllGAd~V~~nG~--------vvnk~GT~~lAl~Ak~~~v---Pv~V~~ 159 (165)
.|+--|-....+.. -+|-.|+..+.-+|+.+++ +-+|..
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ 130 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQA 130 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEE
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 76655432211110 2356799999999999887 444443
No 401
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=49.81 E-value=55 Score=21.86 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=44.8
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hc-h--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhC
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LI-S--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY 151 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m-~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~ 151 (165)
+.+|+++|..|.. ...+...|.+.|+.+....+..-.. .+ . ..|.+|+..+ +++| ..|.-.+..+-+..
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~--l~~~----~~g~~~~~~l~~~~ 77 (140)
T 3h5i_A 5 DKKILIVEDSKFQ-AKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIE--LGEG----MDGVQTALAIQQIS 77 (140)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESS--CSSS----CCHHHHHHHHHHHC
T ss_pred CcEEEEEeCCHHH-HHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEecc--CCCC----CCHHHHHHHHHhCC
Confidence 3567777766642 2345666777787777655433222 22 2 4688887653 2221 23444444444557
Q ss_pred CCcEEEEeec
Q psy2575 152 SIPYPCTFLL 161 (165)
Q Consensus 152 ~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 78 ~~~ii~ls~~ 87 (140)
T 3h5i_A 78 ELPVVFLTAH 87 (140)
T ss_dssp CCCEEEEESS
T ss_pred CCCEEEEECC
Confidence 8999998754
No 402
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=49.77 E-value=59 Score=24.20 Aligned_cols=56 Identities=9% Similarity=0.034 Sum_probs=29.7
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
+.+|++.|.|+-+=..+......+..+|+++..+.......+.+.|.+.|.++.++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA 60 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEE
Confidence 55677777666553333222222346777775444444445566666656555444
No 403
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=49.74 E-value=46 Score=25.53 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=33.3
Q ss_pred HHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHh
Q psy2575 66 LFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGL 115 (165)
Q Consensus 66 ~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~ 115 (165)
.++..++++++. +++....|.. -|..+++.|.+.|+++++|| -|++.++
T Consensus 70 ~i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa 121 (235)
T 1ve2_A 70 RLIALAREGRVV-ARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGA 121 (235)
T ss_dssp HHHHHHHTTCEE-EEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHH
T ss_pred HHHHHHHcCCeE-EEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHH
Confidence 344445445554 4457788875 46778899999999999999 4444443
No 404
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=49.74 E-value=88 Score=24.31 Aligned_cols=76 Identities=11% Similarity=0.159 Sum_probs=46.6
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.++++.|.|+-+=..+....-.+..+|+++..+.......+++.+.+.|-++..+. | .++..++. +
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678888888776643333322235578888876555555667888888787766553 2 23344443 5
Q ss_pred CCEEEEcc
Q psy2575 119 VNKIIIGT 126 (165)
Q Consensus 119 v~~VllGA 126 (165)
+|.++-.|
T Consensus 108 iD~lvnnA 115 (280)
T 4da9_A 108 IDCLVNNA 115 (280)
T ss_dssp CCEEEEEC
T ss_pred CCEEEECC
Confidence 77777655
No 405
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=49.73 E-value=95 Score=27.02 Aligned_cols=108 Identities=9% Similarity=0.120 Sum_probs=63.0
Q ss_pred CEEEEecCCHHHHHHHH-HHHhCCce-EEEEecCCC-CC-hHHHHHHHHhhcCCceEEEc-c----chHHHhchh-----
Q psy2575 53 EIILTLGYSKIVELFLK-NAAQHRKF-QCIVMENSP-EN-KGHELAVSLAKSKIQTVLIP-D----SAMFGLISR----- 118 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~-~A~~~~~f-~ViV~Es~P-~~-eG~~la~~L~~~GI~v~~I~-d----sav~~~m~~----- 118 (165)
.++|+.|.+.-+=..+. ...+ +.. +|+++..++ .. .-.++.++|.+.|.+++++. | .++..++.+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~-~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAE-QGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHH-TTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHH-CCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 78888887776633332 2223 334 444443322 22 34577889999998888763 3 234555543
Q ss_pred -CCEEEEccceeecCCCe-------------eehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 119 -VNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 119 -v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+|.||-.|-....++.+ .|-.|+..+.-+.+......+|...+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS 375 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSS 375 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 45555444221123221 34568888888888888888887655
No 406
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=49.68 E-value=15 Score=33.78 Aligned_cols=26 Identities=23% Similarity=0.348 Sum_probs=12.0
Q ss_pred ccCCCCEEEEecCCH--HHHHHHHHHHh
Q psy2575 48 HIHSNEIILTLGYSK--IVELFLKNAAQ 73 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~--tV~~~L~~A~~ 73 (165)
.|+.+|++++++|-+ .+.++|..|++
T Consensus 334 ~i~~~D~ll~~P~~sf~~v~~~I~~A~~ 361 (687)
T 1xdp_A 334 AIRERDVLLYYPYHTFEHVLELLRQASF 361 (687)
T ss_dssp HHHHSCEEEEETTBCTHHHHHHHHHHHH
T ss_pred HHhcCCEEEECchhhhhhHHHHHHHHhh
Confidence 344455555554421 34445555543
No 407
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=49.42 E-value=55 Score=26.43 Aligned_cols=79 Identities=9% Similarity=0.016 Sum_probs=46.9
Q ss_pred CceEEEEecCCCCC----hHHHHHHHHhhcC-CceEEEccc------hHH-HhchhCCEEEEccceeecCCCeeehhcHH
Q psy2575 75 RKFQCIVMENSPEN----KGHELAVSLAKSK-IQTVLIPDS------AMF-GLISRVNKIIIGTHTVMANGGLRSVCGTH 142 (165)
Q Consensus 75 ~~f~ViV~Es~P~~----eG~~la~~L~~~G-I~v~~I~ds------av~-~~m~~v~~VllGAd~V~~nG~vvnk~GT~ 142 (165)
++++|+++...... ....|++.|.+.| +.|++..|. .++ -.+.+.|.||+.. +|..+...--.
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~-----~~~~l~~~~~~ 77 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDY-----NGDSWPEETNR 77 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECC-----CSSCCCHHHHH
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeC-----CCCcCCHHHHH
Confidence 57888888544332 2245577788888 999988763 221 2467899999643 45555443222
Q ss_pred HHHHHHhhCCCcEEEEe
Q psy2575 143 AVALAAQHYSIPYPCTF 159 (165)
Q Consensus 143 ~lAl~Ak~~~vPv~V~~ 159 (165)
.+.-.- +.+.+++++-
T Consensus 78 ~l~~yV-~~Ggglv~~H 93 (281)
T 4e5v_A 78 RFLEYV-QNGGGVVIYH 93 (281)
T ss_dssp HHHHHH-HTTCEEEEEG
T ss_pred HHHHHH-HcCCCEEEEe
Confidence 222211 2478887763
No 408
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=49.41 E-value=45 Score=24.32 Aligned_cols=62 Identities=10% Similarity=0.034 Sum_probs=37.4
Q ss_pred HHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccceeecCCCeee----hhcHHHHHHHHhhCC-CcEEEEe
Q psy2575 91 HELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHTVMANGGLRS----VCGTHAVALAAQHYS-IPYPCTF 159 (165)
Q Consensus 91 ~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~V~~nG~vvn----k~GT~~lAl~Ak~~~-vPv~V~~ 159 (165)
..+.+.|++.|.++.++++.. .+.++|.++++-- .+ .... ..+...+...+.+.+ +|++-+|
T Consensus 15 ~~~~~~l~~~G~~~~~~~~~~---~l~~~dglil~GG--~~--~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC 81 (191)
T 2ywd_A 15 REHKEALKRLGIEAKEVRKKE---HLEGLKALIVPGG--ES--TTIGKLAREYGIEDEVRKRVEEGSLALFGTC 81 (191)
T ss_dssp HHHHHHHHTTTCCCEEECSGG---GGTTCSEEEECSS--CH--HHHHHHHHHTTHHHHHHHHHHTTCCEEEEET
T ss_pred HHHHHHHHHCCCEEEEeCChh---hhccCCEEEECCC--Ch--hhhHHhhhhhhHHHHHHHHHHCCCCeEEEEC
Confidence 457899999999999998653 4566777776531 00 0111 112233333334567 9999877
No 409
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=49.34 E-value=34 Score=27.38 Aligned_cols=109 Identities=13% Similarity=-0.016 Sum_probs=54.9
Q ss_pred CCCEEEEecCCHHHHHHHHHHH-h-CCceEEEEecCCCCChH--H------HHHHHHhhcCCceEEEc--c-chHHHh-c
Q psy2575 51 SNEIILTLGYSKIVELFLKNAA-Q-HRKFQCIVMENSPENKG--H------ELAVSLAKSKIQTVLIP--D-SAMFGL-I 116 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~-~-~~~f~ViV~Es~P~~eG--~------~la~~L~~~GI~v~~I~--d-sav~~~-m 116 (165)
.+.+||+.|.|.-+=..|.... + ++..+|+++...+...- . .-...+...++.+.... | ..+..+ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 4678888887766644333333 2 26678888764433100 0 00111222233222211 1 223334 4
Q ss_pred hhCCEEEEccceeecC-C-----CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 117 SRVNKIIIGTHTVMAN-G-----GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 117 ~~v~~VllGAd~V~~n-G-----~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.++|.|+--|-..-.. . --+|-.||..++-+|+..+++|+.++
T Consensus 89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~S 137 (362)
T 3sxp_A 89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYAS 137 (362)
T ss_dssp SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Confidence 5566666444311100 0 01456899999999999999944443
No 410
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=49.31 E-value=47 Score=21.90 Aligned_cols=79 Identities=10% Similarity=0.056 Sum_probs=43.4
Q ss_pred CceEEEEecCCCCChHHHHHHHHhh-cCCc-eEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHh
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAK-SKIQ-TVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ 149 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~-~GI~-v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak 149 (165)
+..+|+++|..|.. ...+...|.+ .|+. +....+..-. ..+. +.|.+++..+. ++ .-|...+..+.+
T Consensus 7 ~~~~iLivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~ 78 (143)
T 3cnb_A 7 NDFSILIIEDDKEF-ADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMM--VG-----MDGFSICHRIKS 78 (143)
T ss_dssp --CEEEEECSCHHH-HHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTC--TT-----SCHHHHHHHHHT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEeccc--CC-----CcHHHHHHHHHh
Confidence 45678888776642 2345667777 7888 6665543322 2222 36788776543 22 123333333333
Q ss_pred ---hCCCcEEEEeec
Q psy2575 150 ---HYSIPYPCTFLL 161 (165)
Q Consensus 150 ---~~~vPv~V~~~~ 161 (165)
..++|+++++..
T Consensus 79 ~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 79 TPATANIIVIAMTGA 93 (143)
T ss_dssp STTTTTSEEEEEESS
T ss_pred CccccCCcEEEEeCC
Confidence 356899888754
No 411
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=49.21 E-value=39 Score=28.73 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=42.6
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccc-hHHHhc-hhCCEEEEccceeecCC--CeeehhcHHHHHHHHhhCC
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS-AMFGLI-SRVNKIIIGTHTVMANG--GLRSVCGTHAVALAAQHYS 152 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds-av~~~m-~~v~~VllGAd~V~~nG--~vvnk~GT~~lAl~Ak~~~ 152 (165)
++|.++|- .-...+++.|.+.|.++++++-. ....+. .++|.+|+. +| ......+...+..-+...+
T Consensus 191 ~~V~viD~---G~k~ni~r~L~~~G~~v~vvp~~~~~e~i~~~~~DGliLs------GGPgdp~~~~~~~~~Ir~~~~~~ 261 (379)
T 1a9x_B 191 FHVVAYDF---GAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLS------NGPGDPAPCDYAITAIQKFLETD 261 (379)
T ss_dssp EEEEEEES---SCCHHHHHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEEC------CCSBCSTTCHHHHHHHHHHTTSC
T ss_pred CEEEEEEC---CChHHHHHHHHHCCCEEEEEeccCCHHHHhhcCCCEEEEe------CCCCChHHHHHHHHHHHHHHHcC
Confidence 56666664 22367899999999999999743 222222 246777662 11 1111123333333333457
Q ss_pred CcEEEEe
Q psy2575 153 IPYPCTF 159 (165)
Q Consensus 153 vPv~V~~ 159 (165)
+|++-+|
T Consensus 262 ~PILGIC 268 (379)
T 1a9x_B 262 IPVFGIC 268 (379)
T ss_dssp CCEEEET
T ss_pred CCEEEEC
Confidence 9999877
No 412
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=48.98 E-value=1e+02 Score=24.68 Aligned_cols=71 Identities=8% Similarity=0.140 Sum_probs=44.1
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCce-EEEEecCCCCChHHHHHHHHhhc--CCceEEEccchHHHhchhCCEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKF-QCIVMENSPENKGHELAVSLAKS--KIQTVLIPDSAMFGLISRVNKII 123 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f-~ViV~Es~P~~eG~~la~~L~~~--GI~v~~I~dsav~~~m~~v~~Vl 123 (165)
.+.+++..|.+..-..+.....+ ... +|+|.. |-......+++.+... ++++.......+...++++|.|+
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~-~G~~~v~i~~-R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVT-HGVQKLQVAD-LDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVV 199 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCSEEEEEC-SSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-CCCCEEEEEE-CCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEE
Confidence 46788888877665555554444 233 455553 3333455677777754 35666666556667778888887
No 413
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=48.91 E-value=58 Score=25.04 Aligned_cols=82 Identities=5% Similarity=-0.158 Sum_probs=43.0
Q ss_pred EEEEecCCCCChHHHHHHHHhhcCCceEEEccchH---HHhchhCCEEEEccceeec--CCC---eeehhcHHHHHHHHh
Q psy2575 78 QCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAM---FGLISRVNKIIIGTHTVMA--NGG---LRSVCGTHAVALAAQ 149 (165)
Q Consensus 78 ~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav---~~~m~~v~~VllGAd~V~~--nG~---vvnk~GT~~lAl~Ak 149 (165)
+|.++...|...=-.+...|.+.|++++++.-..- ..-+.++|.+|++----.+ ... -+.+.+...+..-|-
T Consensus 2 ~i~vi~h~~~e~~g~~~~~l~~~g~~~~~~~~~~~~~~p~~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~ 81 (236)
T 3l7n_A 2 RIHFILHETFEAPGAYLAWAALRGHDVSMTKVYRYEKLPKDIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAA 81 (236)
T ss_dssp EEEEEECCTTSCCHHHHHHHHHTTCEEEEEEGGGTCCCCSCGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCCchHHHHHHHHCCCeEEEEeeeCCCCCCCCccccCEEEECCCCCCcccccccCcccchHHHHHHHHHHH
Confidence 55666654443223567888899999988864321 1123467777765311110 000 011112333333445
Q ss_pred hCCCcEEEEe
Q psy2575 150 HYSIPYPCTF 159 (165)
Q Consensus 150 ~~~vPv~V~~ 159 (165)
..++|++-+|
T Consensus 82 ~~~~PvLGIC 91 (236)
T 3l7n_A 82 KSEKIIVGVC 91 (236)
T ss_dssp HTTCEEEEET
T ss_pred HcCCCEEEEc
Confidence 6789999877
No 414
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=48.88 E-value=82 Score=28.26 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=43.3
Q ss_pred HHHHHHHHhhcCCceEEEccc--------hHHHhchhC-CEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 90 GHELAVSLAKSKIQTVLIPDS--------AMFGLISRV-NKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 90 G~~la~~L~~~GI~v~~I~ds--------av~~~m~~v-~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
..+.++.|++.||++++|... .+....++. ..|++-=|... .|| .|+...+.++....+|+..++-
T Consensus 513 al~Aa~~L~~~Gi~v~Vidlr~l~PlD~e~i~~~~~~~~~~vvvvEe~~~-~GG----~G~~v~~~l~~~~~~~v~~~g~ 587 (616)
T 3mos_A 513 ALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYY-EGG----IGEAVSSAVVGEPGITVTHLAV 587 (616)
T ss_dssp HHHHHHHHHTTTCEEEEEECSEEESCCHHHHHHHHHHTTTEEEEEEEEES-TTS----HHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEeCccCCCCHHHHHHHHHhcCCEEEEEcCCCC-CcC----HHHHHHHHHHhcCCCCEEEEeC
Confidence 344577788888888777543 234455667 67766555543 344 4888888888777788877653
No 415
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=48.58 E-value=1e+02 Score=24.49 Aligned_cols=118 Identities=12% Similarity=0.072 Sum_probs=65.4
Q ss_pred ChHHHHHHHHHHhcc----cCCC-CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 34 ANPTSDTAPSQACEH----IHSN-EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~-~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
....++.+++...++ +... .+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~--p~~~~~~--~~~~~~g~~~~~v~ 143 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV-RNGDEVICFD--PSYDSYA--PAIALSGGIVKRMA 143 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC-CTTCEEEEEE--SCCTTHH--HHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC-CCCCEEEEeC--CCchhHH--HHHHHcCCEEEEee
Confidence 456788888876443 2344 67777777666665555443 3334676664 4444433 34456788877776
Q ss_pred cc---------hHHHhch-hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 109 DS---------AMFGLIS-RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 109 ds---------av~~~m~-~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.. .+...+. +...|++. ..-.+.|.+...-=-..++-+|+++++++++
T Consensus 144 ~~~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 144 LQPPHFRVDWQEFAALLSERTRLVILN-TPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp CCTTTCCCCHHHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred cCcccCcCCHHHHHHhhcccCEEEEEe-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 32 1222232 23344432 2222345444332235678889999998876
No 416
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=48.54 E-value=18 Score=25.06 Aligned_cols=66 Identities=9% Similarity=0.021 Sum_probs=38.1
Q ss_pred HHHHHhhcCCceEEEccchH-HHhchhCCEEEEccceeecCCCeee--hhcHHHHHHHHhhCCCcEEEEee
Q psy2575 93 LAVSLAKSKIQTVLIPDSAM-FGLISRVNKIIIGTHTVMANGGLRS--VCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav-~~~m~~v~~VllGAd~V~~nG~vvn--k~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+++.|.+.|++|+++..... ..-+.+.|.+++|+-.. . |+..- .+-.+.=-+...-.++|+.+++-
T Consensus 19 ia~~l~~~g~~v~~~~~~~~~~~~l~~~d~iiig~pty-~-~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t 87 (138)
T 5nul_A 19 IAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAM-T-DEVLEESEFEPFIEEISTKISGKKVALFGS 87 (138)
T ss_dssp HHHHHHHTTCCCEEEEGGGCCHHHHTTCSEEEEEECCB-T-TTBCCTTTHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEhhhCCHHHHhhCCEEEEEcCcc-C-CCCCChHHHHHHHHHHHhhcCCCEEEEEEe
Confidence 45556678988888765543 23467899999997553 2 33332 12222222211235788887754
No 417
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=48.54 E-value=58 Score=21.74 Aligned_cols=77 Identities=14% Similarity=0.165 Sum_probs=38.8
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCC
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSI 153 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~v 153 (165)
.+|+++|..|.. ...+...|...|+.+....+..-. ..+. +.|.+++..+ +++. -|--.+..+-+...+
T Consensus 5 ~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~--l~~~-----~g~~l~~~l~~~~~~ 76 (136)
T 2qzj_A 5 TKILIIDGDKDN-CQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEII--LSDG-----DGWTLCKKIRNVTTC 76 (136)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESE--ETTE-----EHHHHHHHHHTTCCC
T ss_pred CeEEEEcCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCC--CCCC-----CHHHHHHHHccCCCC
Confidence 466666665532 233455666667766655443221 1121 3677777543 2321 233333333334478
Q ss_pred cEEEEeec
Q psy2575 154 PYPCTFLL 161 (165)
Q Consensus 154 Pv~V~~~~ 161 (165)
|+++++..
T Consensus 77 ~ii~ls~~ 84 (136)
T 2qzj_A 77 PIVYMTYI 84 (136)
T ss_dssp CEEEEESC
T ss_pred CEEEEEcC
Confidence 88887653
No 418
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.39 E-value=48 Score=25.64 Aligned_cols=19 Identities=21% Similarity=0.092 Sum_probs=13.7
Q ss_pred ehhcHHHHHHHHhhCCCcE
Q psy2575 137 SVCGTHAVALAAQHYSIPY 155 (165)
Q Consensus 137 nk~GT~~lAl~Ak~~~vPv 155 (165)
|.-||..++.+++..+++.
T Consensus 82 ~v~~t~~l~~~~~~~~~~~ 100 (298)
T 4b4o_A 82 RLETTQLLAKAITKAPQPP 100 (298)
T ss_dssp HHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 4568888888888776553
No 419
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=48.36 E-value=15 Score=30.39 Aligned_cols=75 Identities=15% Similarity=0.167 Sum_probs=44.3
Q ss_pred ccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccc
Q psy2575 48 HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd 127 (165)
.+..+.+|+..|.+..-..+...+++ ..++|++++..|...+..++. .-+...+....++..+.+++|.+..+.+
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~-lG~~viv~d~~~~~p~~~~ad----~~~~~~~~d~~~l~~~~~~~dvi~~~~E 82 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQK-MGYKVVVLDPSEDCPCRYVAH----EFIQAKYDDEKALNQLGQKCDVITYEFE 82 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCTTCTTGGGSS----EEEECCTTCHHHHHHHHHHCSEEEESST
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCChhhhhCC----EEEECCCCCHHHHHHHHHhCCcceeccc
Confidence 45678899999999876666666655 567888888777644333221 1010001111234455566777766544
No 420
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=48.25 E-value=93 Score=24.05 Aligned_cols=117 Identities=8% Similarity=0.006 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhcccCCCC-EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhc--CCceEEEccc--
Q psy2575 36 PTSDTAPSQACEHIHSNE-IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKS--KIQTVLIPDS-- 110 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~-~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~--GI~v~~I~ds-- 110 (165)
...+.+.+..++++.... +++|-|.+..+...+..+. ++.-+|++.+ |.+.+...+..+... |.++..++..
T Consensus 43 ~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~-~~gd~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 119 (356)
T 1v72_A 43 ELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMT-PPWGNIYCHP--ASHINNDECGAPEFFSNGAKLMTVDGPAA 119 (356)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSC-CTTEEEEECT--TSHHHHSSTTHHHHHTTSCEEEECCCGGG
T ss_pred hHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhc-CCCCEEEEcC--ccchhhhhchHHHHHhCCcEEEEecCCCC
Confidence 344455554445554333 5666666655554554432 3445666643 433221111113334 7777776532
Q ss_pred -----hHHH-hchh--------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 -----AMFG-LISR--------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 -----av~~-~m~~--------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+-. .+.+ ...|++-. ....|.+...-=-..++-+|+++++++++
T Consensus 120 ~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~--~~~tG~~~~~~~l~~i~~~~~~~~~~li~ 178 (356)
T 1v72_A 120 KLDIVRLRERTREKVGDVHTTQPACVSITQ--ATEVGSIYTLDEIEAIGDVCKSSSLGLHM 178 (356)
T ss_dssp CCCHHHHHHHTTSSTTCTTSCEEEEEEEES--SCTTSCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEcHHHHHHHhhhcchhhccCCceEEEEEc--CCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 2333 3332 22333332 12234333333335678889999999876
No 421
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=48.19 E-value=59 Score=24.86 Aligned_cols=110 Identities=9% Similarity=0.014 Sum_probs=60.7
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.++|+.|.|+-+=..+....-.+..+|+++..++ .....+...|.+.|-++.++. | .++..++. +
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV-EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 467888888877664433322222456788775433 344566778887776666553 3 23333333 4
Q ss_pred CCEEEEccceeecCCCe-------------eehhcHHHHHHHHhh----CCCcEEEEeec
Q psy2575 119 VNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQH----YSIPYPCTFLL 161 (165)
Q Consensus 119 v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~----~~vPv~V~~~~ 161 (165)
+|.++-.|-.....|.+ +|-.|++.+...+.. .+.+.+|...+
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 166 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS 166 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 78777666432222221 355677777665432 44555555433
No 422
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=48.11 E-value=58 Score=21.61 Aligned_cols=76 Identities=5% Similarity=0.050 Sum_probs=37.5
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHH-Hhch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh-CC
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMF-GLIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH-YS 152 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~-~~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~-~~ 152 (165)
.+|+++|..|.. ...+...|.+.|+.+....+..-. ..+. +.|.+++.. +++ ..|...+..+-+. .+
T Consensus 5 ~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~---~~~-----~~g~~~~~~l~~~~~~ 75 (142)
T 2qxy_A 5 PTVMVVDESRIT-FLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDV---FEG-----EESLNLIRRIREEFPD 75 (142)
T ss_dssp CEEEEECSCHHH-HHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEEC---TTT-----HHHHHHHHHHHHHCTT
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeC---CCC-----CcHHHHHHHHHHHCCC
Confidence 456666655432 233455566667666654432221 1222 367777654 222 1233333333333 35
Q ss_pred CcEEEEeec
Q psy2575 153 IPYPCTFLL 161 (165)
Q Consensus 153 vPv~V~~~~ 161 (165)
+|+++++..
T Consensus 76 ~pii~ls~~ 84 (142)
T 2qxy_A 76 TKVAVLSAY 84 (142)
T ss_dssp CEEEEEESC
T ss_pred CCEEEEECC
Confidence 888887654
No 423
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=48.08 E-value=35 Score=24.85 Aligned_cols=46 Identities=11% Similarity=0.040 Sum_probs=24.9
Q ss_pred HHhchhCCEEEEccceeecCCCeeehhcHHHHHHHH-----hhCCCcEEEEee
Q psy2575 113 FGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAA-----QHYSIPYPCTFL 160 (165)
Q Consensus 113 ~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~A-----k~~~vPv~V~~~ 160 (165)
..-+.++|.+++|+=.. +|++-...=.+.=-+.. .-.++|+.+++-
T Consensus 66 ~~~l~~aD~ii~gsP~y--~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t 116 (200)
T 2a5l_A 66 LEDLKNCAGLALGSPTR--FGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTS 116 (200)
T ss_dssp HHHHHTCSEEEEEEECB--TTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEE
T ss_pred HHHHHHCCEEEEEcChh--ccCccHHHHHHHHHHHHHhhccccCCCEEEEEEe
Confidence 44567899999997543 35553333222111111 125788887654
No 424
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=47.91 E-value=44 Score=29.65 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=44.0
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhch--hCCEEEEc--cceeecCCCeeehhcHHHHHHHHhhCC
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLIS--RVNKIIIG--THTVMANGGLRSVCGTHAVALAAQHYS 152 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~--~v~~VllG--Ad~V~~nG~vvnk~GT~~lAl~Ak~~~ 152 (165)
-+|.|+|-.-.+ -+.+++.|++.|+.+.+++-..-..-+. ++|.+|+. ...+...|.. ..- ..+--.|...+
T Consensus 8 ~~IlilD~Gs~~-~~~I~r~lre~Gv~~eiv~~~~~~~~i~~~~~dgIIlsGGp~s~~~~~~~--~~~-~~l~~~a~~~g 83 (556)
T 3uow_A 8 DKILVLNFGSQY-FHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSP--HLK-KEVFEYFLEKK 83 (556)
T ss_dssp CEEEEEESSCTT-HHHHHHHHHHTTCCEEEEETTCCGGGTTTSCEEEEEECCCSCCTTSTTCC--CCC-HHHHHHHHHTT
T ss_pred CEEEEEECCCcc-HHHHHHHHHHCCCeEEEEECCCCHHHHhhcCCCEEEECCCCCcccccCCc--chh-HHHHHHhhhcC
Confidence 467777744322 3567999999999999987432222222 45666553 3333333211 011 12333455679
Q ss_pred CcEEEEe
Q psy2575 153 IPYPCTF 159 (165)
Q Consensus 153 vPv~V~~ 159 (165)
+|++-+|
T Consensus 84 ~PvLGIC 90 (556)
T 3uow_A 84 IPIFGIC 90 (556)
T ss_dssp CCEEEET
T ss_pred CCEEEEC
Confidence 9999776
No 425
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=47.90 E-value=74 Score=25.15 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=57.1
Q ss_pred EEEecCCHHHHHHHHHHHhCCceEEEEe---cCCCCCh---HHHHHHHHhhcCCceEEEccchHHHhch----hCCEEEE
Q psy2575 55 ILTLGYSKIVELFLKNAAQHRKFQCIVM---ENSPENK---GHELAVSLAKSKIQTVLIPDSAMFGLIS----RVNKIII 124 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~~f~ViV~---Es~P~~e---G~~la~~L~~~GI~v~~I~dsav~~~m~----~v~~Vll 124 (165)
|+--|.|+.=.++|..+ +-.|+|+.. |+....+ -.+++.+|+...-. ++..-+. .-+.++|
T Consensus 6 lILAS~SPrR~eLL~~~--Gi~f~v~~~~iDE~~~~~~~~~p~~~v~~lA~~KA~-------av~~~~~~~~~~~~~~VI 76 (230)
T 2p5x_A 6 VVLASASPRRQEILSNA--GLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKAL-------EVANRLYQKDLRAPDVVI 76 (230)
T ss_dssp EEECCCCHHHHHHHHHT--TCCCEECCCCCCCCCCGGGSSSHHHHHHHHHHHHHH-------HHHHHHHHHHSCCCSEEE
T ss_pred EEEeCCCHHHHHHHHHC--CCCeEEeCCCCCCCCCccccCCHHHHHHHHHHHHHH-------HHHHHhhhhccCCCCEEE
Confidence 44456676655566654 788998854 4322222 34677777765411 1222121 1234799
Q ss_pred ccceee-cCCCeeehhcHHHHH--HHHhhCCCcEEEE
Q psy2575 125 GTHTVM-ANGGLRSVCGTHAVA--LAAQHYSIPYPCT 158 (165)
Q Consensus 125 GAd~V~-~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~ 158 (165)
|||.|. -||.++.|-.+..=| ++.+..+...-|.
T Consensus 77 gaDTvV~~dg~IlgKP~d~eeA~~mL~~lSG~~h~V~ 113 (230)
T 2p5x_A 77 GADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVF 113 (230)
T ss_dssp EEEEEEEETTEEECCCSSHHHHHHHHHHHTTSEEEEE
T ss_pred EeCeEEEECCEEecCCCCHHHHHHHHHHhCCCcEEEE
Confidence 999965 599999999988765 4555566665544
No 426
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=47.76 E-value=48 Score=26.47 Aligned_cols=18 Identities=6% Similarity=-0.097 Sum_probs=13.7
Q ss_pred HHHHHHHhhCCCcEEEEe
Q psy2575 142 HAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 142 ~~lAl~Ak~~~vPv~V~~ 159 (165)
+..+++|+..++|++...
T Consensus 125 ~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 125 LIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred hHHHHHHHHhCCCEEEEe
Confidence 445678899999988763
No 427
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=47.73 E-value=25 Score=26.01 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=45.3
Q ss_pred cCCHHHHHHHHHHHh--C--CceEEEEecCCCCChH----HHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccc
Q psy2575 59 GYSKIVELFLKNAAQ--H--RKFQCIVMENSPENKG----HELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~--~~f~ViV~Es~P~~eG----~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd 127 (165)
++|...+.+|.+..+ + ..++|.-.-+.|...| ....+.|++.||+....+-.--...+.+.|.||.=.+
T Consensus 16 cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIl~Md~ 92 (161)
T 3jvi_A 16 CRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFDYIFAMDN 92 (161)
T ss_dssp SHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHHCSEEEESSH
T ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhcCCCEEEEeCh
Confidence 678899999987765 2 3688887777775434 5668889999998633222111233456888776433
No 428
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=47.58 E-value=1e+02 Score=24.46 Aligned_cols=58 Identities=10% Similarity=0.161 Sum_probs=39.6
Q ss_pred ccCCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 48 HIHSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 48 ~I~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
.++++++|++.|.+.+-..+=..+++ +-+..|++.+..|. .-.+.++..|-+|..+..
T Consensus 57 ~~~~g~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~----~k~~~~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 57 EIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQ----ERRAAMRAYGAELILVTK 115 (303)
T ss_dssp CCCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCH----HHHHHHHHTTCEEEEECT
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEECCCCCH----HHHHHHHHcCCEEEEECC
Confidence 34566899999988877665444444 88888888887552 234456667777777664
No 429
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=47.58 E-value=59 Score=26.12 Aligned_cols=49 Identities=20% Similarity=0.280 Sum_probs=33.7
Q ss_pred HHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHhc
Q psy2575 67 FLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGLI 116 (165)
Q Consensus 67 ~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~m 116 (165)
++..++++++. |++....|.. -|..+++.|.+.||++++|| -|++.++.
T Consensus 95 l~~~~~~G~~V-v~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~ 146 (294)
T 2ybo_A 95 LVRLARQQRRV-VRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCS 146 (294)
T ss_dssp HHHHHHTTCCE-EEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHH
T ss_pred HHHHHHCCCeE-EEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHH
Confidence 44444445553 4446788864 56788999999999999999 45555544
No 430
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=47.46 E-value=1.2e+02 Score=25.02 Aligned_cols=112 Identities=13% Similarity=-0.018 Sum_probs=62.6
Q ss_pred HHHHHHHHhcccC--CC-----CEEEEecCCHHHHHHHHHHH---------hC---CceEEEEecCCCCChHHHHHHHHh
Q psy2575 38 SDTAPSQACEHIH--SN-----EIILTLGYSKIVELFLKNAA---------QH---RKFQCIVMENSPENKGHELAVSLA 98 (165)
Q Consensus 38 ~~~Ia~~a~~~I~--~~-----~~ILT~g~S~tV~~~L~~A~---------~~---~~f~ViV~Es~P~~eG~~la~~L~ 98 (165)
.+++.+..++++. .. ..++|-|.+..+...+..+. .| .+-+|++.+ .. ....+.+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~---~h--~~~~~~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP---VQ--ICWHKFAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS---CC--HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC---Cc--HHHHHHHH
Confidence 4455555555553 22 26777777765555554432 12 124777765 22 23444555
Q ss_pred hcCCceEEEccc---------hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhC------CCcEEE
Q psy2575 99 KSKIQTVLIPDS---------AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHY------SIPYPC 157 (165)
Q Consensus 99 ~~GI~v~~I~ds---------av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~------~vPv~V 157 (165)
..|+++..++.. ++...+.+-+++++....-.+.|.+. . -..|+-+|+++ +++++|
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~-~--l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE-F--PQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBC-C--HHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccC-C--HHHHHHHHHHHhhccCCCCcEEE
Confidence 679998888743 12333333346666665556666553 3 24577777774 888877
No 431
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=47.28 E-value=23 Score=29.02 Aligned_cols=121 Identities=18% Similarity=0.144 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHhcc----cCCCCEEEEecCCHHHHHHHHHHHhCCce--------------EEEEecCCCCChHHHHH-
Q psy2575 34 ANPTSDTAPSQACEH----IHSNEIILTLGYSKIVELFLKNAAQHRKF--------------QCIVMENSPENKGHELA- 94 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~----I~~~~~ILT~g~S~tV~~~L~~A~~~~~f--------------~ViV~Es~P~~eG~~la- 94 (165)
....++.|+++.... +...++++|-|.+..+...+....+ ..- +|++++ .|.+.+...+
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~-~gd~~~~~~~~~~g~~~~vi~~~-~p~~~~~~~~~ 162 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG-AFVNEHSQDKESKSVDKSILLPL-TPEYIGYSDVH 162 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE-EEECC-------CEEEEEEEESS-SSCCGGGTTCC
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC-CCccccccccccccccceEEEeC-CCCccchhhcc
Confidence 357788888876432 4556788887766555544443322 111 566653 3444333221
Q ss_pred ---HHHhhcCCceEEEc------------c-chHHHh---c-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCc
Q psy2575 95 ---VSLAKSKIQTVLIP------------D-SAMFGL---I-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIP 154 (165)
Q Consensus 95 ---~~L~~~GI~v~~I~------------d-sav~~~---m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vP 154 (165)
..+...|..+..++ | ..+... + ++...|++ ...-.+.|.+...---..++-+|++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~a~~~~~~ 241 (444)
T 3if2_A 163 VEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICC-SRPTNPTGNVLTDEEMAHLAEIAKRYDIP 241 (444)
T ss_dssp SSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred cccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEe-CCCCCCCCCcCCHHHHHHHHHHHHHCCCE
Confidence 14566777776665 1 122222 1 22334444 22223456665555556678889999999
Q ss_pred EEE
Q psy2575 155 YPC 157 (165)
Q Consensus 155 v~V 157 (165)
+++
T Consensus 242 li~ 244 (444)
T 3if2_A 242 LII 244 (444)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 432
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=47.14 E-value=57 Score=24.69 Aligned_cols=28 Identities=4% Similarity=-0.091 Sum_probs=17.2
Q ss_pred EecCCCCChHHHHHHHHhhcCCceEEEc
Q psy2575 81 VMENSPENKGHELAVSLAKSKIQTVLIP 108 (165)
Q Consensus 81 V~Es~P~~eG~~la~~L~~~GI~v~~I~ 108 (165)
++-.++...++.+++.|++.|+++..+.
T Consensus 4 il~~~~~~~~~~~~~a~~~~G~~v~~~~ 31 (280)
T 1uc8_A 4 ILYDRIRPDERMLFERAEALGLPYKKVY 31 (280)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEecCCCHHHHHHHHHHHHcCCcEEEEe
Confidence 3334445566667777777777766654
No 433
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=47.09 E-value=47 Score=21.87 Aligned_cols=80 Identities=10% Similarity=0.068 Sum_probs=43.8
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCceEE-EccchH-HHhc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhh
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQTVL-IPDSAM-FGLI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~-I~dsav-~~~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~ 150 (165)
...+|+++|..|.. ...+...|.+.|+.+.. ..+..- ...+ .+.|.+++..+. ++ ..-|.-.+..+-+.
T Consensus 8 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~--~~----~~~g~~~~~~l~~~ 80 (140)
T 3cg0_A 8 DLPGVLIVEDGRLA-AATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML--CG----ALDGVETAARLAAG 80 (140)
T ss_dssp CCCEEEEECCBHHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--CS----SSCHHHHHHHHHHH
T ss_pred CCceEEEEECCHHH-HHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCC--CC----CCCHHHHHHHHHhC
Confidence 45678888766542 23456667777888774 443221 1222 237888876542 21 01233333333333
Q ss_pred CCCcEEEEeec
Q psy2575 151 YSIPYPCTFLL 161 (165)
Q Consensus 151 ~~vPv~V~~~~ 161 (165)
.++|+++++..
T Consensus 81 ~~~~ii~ls~~ 91 (140)
T 3cg0_A 81 CNLPIIFITSS 91 (140)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEEecC
Confidence 68999988754
No 434
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=46.93 E-value=70 Score=25.27 Aligned_cols=102 Identities=14% Similarity=0.219 Sum_probs=52.4
Q ss_pred HHHHHHHHh----cccCCCCEEEEec-CCHHHHHHHHHHHh--C-C-ceEEEEe-cCCC---CChHHHHHHHHhhc-CCc
Q psy2575 38 SDTAPSQAC----EHIHSNEIILTLG-YSKIVELFLKNAAQ--H-R-KFQCIVM-ENSP---ENKGHELAVSLAKS-KIQ 103 (165)
Q Consensus 38 ~~~Ia~~a~----~~I~~~~~ILT~g-~S~tV~~~L~~A~~--~-~-~f~ViV~-Es~P---~~eG~~la~~L~~~-GI~ 103 (165)
.+.+++.|+ +.|+++++ +-++ +++|+..+.....+ . + +.+++=+ ++-+ ...-..|.+.|.+. |++
T Consensus 40 ~~~l~~~aA~~l~~~l~~~~v-iGla~~G~T~~~~~~~l~~~~~~~~~v~~v~L~ggl~~~~~~~~~~~~~~la~~~~~~ 118 (264)
T 2r5f_A 40 KQAIGSAAAHYLETSLSAQDH-IGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLGGVGNKGAFEATLLTQRLATLLNCP 118 (264)
T ss_dssp HHHHHHHHHHHHHHHCCTTCE-EEECTTCHHHHHHHHTCCC--CCCCCSEEEECEECCC--CHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEECcchHHHHHHHHhhccccCCCCCcEEEECCCCCCCccccCHHHHHHHHHHHhCCe
Confidence 455555554 45577765 5567 99999988876644 2 3 5666633 3332 22233456666653 665
Q ss_pred eEEEc--c---c-----------hHHH---hchhCCEEEEccceeecCCCeeehhcH
Q psy2575 104 TVLIP--D---S-----------AMFG---LISRVNKIIIGTHTVMANGGLRSVCGT 141 (165)
Q Consensus 104 v~~I~--d---s-----------av~~---~m~~v~~VllGAd~V~~nG~vvnk~GT 141 (165)
..+++ + + .+.. ...++|..++|.=..-+||.+.+ -|+
T Consensus 119 ~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~i~~-~g~ 174 (264)
T 2r5f_A 119 AFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFDSITLAIVGIGELEPSQLLRN-SGN 174 (264)
T ss_dssp EECCCCC----------CCHHHHHHHHHHHHTTTCCEEEECCEECC-----------
T ss_pred eEEeeCCcccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCCCCCccHhh-cCC
Confidence 54332 1 1 1111 23469999999877667788865 574
No 435
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=46.89 E-value=46 Score=25.83 Aligned_cols=101 Identities=9% Similarity=0.068 Sum_probs=50.8
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEE--EccchHHHhchhCCEEEEccceeec
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVL--IPDSAMFGLISRVNKIIIGTHTVMA 131 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~--I~dsav~~~m~~v~~VllGAd~V~~ 131 (165)
+||+.|.+.-+=..|......+. .++++..++......+ ..++.... +.|..+..++.++|.|+--|-....
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~ 76 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAADDIKDYLKGAEEVWHIAANPDV 76 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCC
T ss_pred EEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCChHHHHHHhcCCCEEEECCCCCCh
Confidence 57777776666443433333233 4444443332211111 12222111 1234556667778877755432111
Q ss_pred CCC--------eeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 132 NGG--------LRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 132 nG~--------vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+-. -+|-.|+..+.-+|+..+++-+|...
T Consensus 77 ~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~S 113 (313)
T 3ehe_A 77 RIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTS 113 (313)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeC
Confidence 111 13677999999999988886555443
No 436
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=46.86 E-value=68 Score=22.07 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=54.7
Q ss_pred EEEEec--CCHHHHHHHHHHHh-----CCceEEE-EecCCCCC---------------hHH----HHHHHHhhcCCc-eE
Q psy2575 54 IILTLG--YSKIVELFLKNAAQ-----HRKFQCI-VMENSPEN---------------KGH----ELAVSLAKSKIQ-TV 105 (165)
Q Consensus 54 ~ILT~g--~S~tV~~~L~~A~~-----~~~f~Vi-V~Es~P~~---------------eG~----~la~~L~~~GI~-v~ 105 (165)
+++-+. .|..-...+..|.+ +.+++++ |.+..+.. ++. ++.+.+.+.|++ ++
T Consensus 18 ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~ 97 (156)
T 3fg9_A 18 ILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQVE 97 (156)
T ss_dssp EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceE
Confidence 444467 77766666665554 5556644 45543320 122 223445667883 44
Q ss_pred EE--c-cch---HHHh-c--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 106 LI--P-DSA---MFGL-I--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 106 ~I--~-dsa---v~~~-m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
.. . ... +..+ . .++|.+++|+..--.-+ .-.|+..- -+.++.++||+++
T Consensus 98 ~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~---~~~Gs~~~-~vl~~a~~PVlvV 155 (156)
T 3fg9_A 98 PLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFPHS---KIAGAIGP-RLARKAPISVIVV 155 (156)
T ss_dssp EEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCTTS---SSCSCHHH-HHHHHCSSEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCccc---eeecchHH-HHHHhCCCCEEEe
Confidence 32 2 222 2222 1 35899999998632222 23566543 4557788999986
No 437
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=46.82 E-value=43 Score=25.54 Aligned_cols=22 Identities=5% Similarity=-0.349 Sum_probs=15.1
Q ss_pred HHHHHHHhhCCCcEEEEeeccc
Q psy2575 142 HAVALAAQHYSIPYPCTFLLNI 163 (165)
Q Consensus 142 ~~lAl~Ak~~~vPv~V~~~~~~ 163 (165)
..+.-+|+++++++++-++...
T Consensus 92 ~~l~~~a~~~g~~~~i~~~~~g 113 (236)
T 2dc1_A 92 SRVREVCRKTGRRVYIASGAIG 113 (236)
T ss_dssp HHHHHHHHHHCCCEEECCTTCS
T ss_pred HHHHHHHHhcCCeEEecCcccc
Confidence 4667778888888876655443
No 438
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=46.75 E-value=61 Score=21.46 Aligned_cols=78 Identities=8% Similarity=0.060 Sum_probs=40.0
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCC--ceEEEccchHH-Hhc--------hhCCEEEEccceeecCCCeeehhcHHHH
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKI--QTVLIPDSAMF-GLI--------SRVNKIIIGTHTVMANGGLRSVCGTHAV 144 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI--~v~~I~dsav~-~~m--------~~v~~VllGAd~V~~nG~vvnk~GT~~l 144 (165)
+.+|+++|..|.. ...+...|.+.|. .+....+..-. ..+ ...|.+++..+. ++ .-|--.+
T Consensus 7 ~~~ILivdd~~~~-~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l--~~-----~~g~~~~ 78 (143)
T 2qvg_A 7 KVDILYLEDDEVD-IQSVERVFHKISSLIKIEIAKSGNQALDMLYGRNKENKIHPKLILLDINI--PK-----MNGIEFL 78 (143)
T ss_dssp CCSEEEECCCHHH-HHHHHHHHHHHCTTCCEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTC--TT-----SCHHHHH
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHHhCCCceEEEECCHHHHHHHHHhcccccCCCCCEEEEecCC--CC-----CCHHHHH
Confidence 4566777665542 2345566666665 56555543222 122 236777776542 21 1233333
Q ss_pred HHHHhh---CCCcEEEEeec
Q psy2575 145 ALAAQH---YSIPYPCTFLL 161 (165)
Q Consensus 145 Al~Ak~---~~vPv~V~~~~ 161 (165)
..+.+. .++|+++++..
T Consensus 79 ~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 79 KELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp HHHTTSGGGTTCEEEEEESC
T ss_pred HHHHcCccccCCcEEEEeCC
Confidence 333333 46888887653
No 439
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=46.63 E-value=1.3e+02 Score=25.27 Aligned_cols=114 Identities=13% Similarity=0.040 Sum_probs=59.4
Q ss_pred HHHHHHHhcccC----CCCEEEEecCCHHHHHHHHHHHh---------C----CceEEEEecCCCCChHHHHHHHHhhcC
Q psy2575 39 DTAPSQACEHIH----SNEIILTLGYSKIVELFLKNAAQ---------H----RKFQCIVMENSPENKGHELAVSLAKSK 101 (165)
Q Consensus 39 ~~Ia~~a~~~I~----~~~~ILT~g~S~tV~~~L~~A~~---------~----~~f~ViV~Es~P~~eG~~la~~L~~~G 101 (165)
+.+.+..++++. ..+.++|-|.|......+..+.. | .+.+|++.+ +......-+..+...|
T Consensus 135 ~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~--~~h~s~~~~~~~~g~g 212 (504)
T 2okj_A 135 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE--QSHYSIKKAGAALGFG 212 (504)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET--TSCTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC--cchHHHHHHHHHcCCC
Confidence 334344455553 44678887777766666665532 3 144677654 3333322222222334
Q ss_pred C-ceEEEccc--------hHHHhchh------CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 102 I-QTVLIPDS--------AMFGLISR------VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 102 I-~v~~I~ds--------av~~~m~~------v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
. ++..++.. ++...+.+ -.++++....-...|.+ .. -..|+-+|++++++++|
T Consensus 213 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i-~~--l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 213 TDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DP--IQEIADICEKYNLWLHV 280 (504)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB-CC--HHHHHHHHHHHTCEEEE
T ss_pred cccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc-CC--HHHHHHHHHHcCCEEEE
Confidence 4 78777642 23333333 13444443222333433 33 24688889999999876
No 440
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=46.55 E-value=65 Score=24.54 Aligned_cols=107 Identities=7% Similarity=-0.029 Sum_probs=57.5
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhc--------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLI--------S 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m--------~ 117 (165)
.+.++++.|.|+-+=..+......+..+|+++..++ .....+++.|.+.|-++..+. | .++..++ .
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ-KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467888888877663333322222446788775443 233455677776676665442 2 2233333 3
Q ss_pred hCCEEEEccceeecCCCe-------------eehhcHHHHHHHH----hhCCCcEEEEe
Q psy2575 118 RVNKIIIGTHTVMANGGL-------------RSVCGTHAVALAA----QHYSIPYPCTF 159 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~~ 159 (165)
++|.++--|-. ...+.+ +|-.|++.++.++ +..+.+-+|..
T Consensus 87 ~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 144 (260)
T 2ae2_A 87 KLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFI 144 (260)
T ss_dssp CCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEE
T ss_pred CCCEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 56766655532 222211 4667888887766 33455555543
No 441
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=46.54 E-value=23 Score=28.89 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=38.8
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccce
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~ 128 (165)
+|+..|.+..-..+...+++ ..++|++++..|...+..+ .+.-+...+....++..+..++|.|+.+.+.
T Consensus 3 ~Ililg~g~~g~~~~~a~~~-~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~d~~~l~~~~~~~d~v~~~~e~ 72 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKK-MGFYVIVLDPTPRSPAGQV----ADEQIVAGFFDSERIEDLVKGSDVTTYDLEH 72 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSTTCTTGGG----SSEEEECCTTCHHHHHHHHHTCSEEEESCSC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCCCCchhhh----CceEEECCCCCHHHHHHHHhcCCEEEecccC
Confidence 68888888766666666554 4568888887766543322 2111110000112333344678888887653
No 442
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=46.50 E-value=88 Score=23.26 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=44.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS-------R 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~-------~ 118 (165)
.+.+|++.|.|+-+=..+.+....+..+|+++..++......+.+.|.+.|-++.++. | .++..++. +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3568888887776633333222224567888766533344566777777676665543 2 23444444 5
Q ss_pred CCEEEEcc
Q psy2575 119 VNKIIIGT 126 (165)
Q Consensus 119 v~~VllGA 126 (165)
+|.++--|
T Consensus 86 id~vi~~A 93 (258)
T 3afn_B 86 IDVLINNA 93 (258)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 77777655
No 443
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=46.45 E-value=77 Score=24.20 Aligned_cols=25 Identities=16% Similarity=-0.086 Sum_probs=19.0
Q ss_pred eehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 136 RSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 136 vnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+|-.|+..++-+|+..++.++.+..
T Consensus 80 ~n~~~~~~l~~a~~~~~~~~v~~SS 104 (299)
T 1n2s_A 80 LNATSVEAIAKAANETGAWVVHYST 104 (299)
T ss_dssp HHTHHHHHHHHHHTTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 3567899999999998887555443
No 444
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=46.41 E-value=1.1e+02 Score=24.81 Aligned_cols=73 Identities=21% Similarity=0.251 Sum_probs=45.2
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcCCce---------EEEcc--chHHHhchhCCEEEEccceeecCCCeeehhcHHH
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSKIQT---------VLIPD--SAMFGLISRVNKIIIGTHTVMANGGLRSVCGTHA 143 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~GI~v---------~~I~d--sav~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~ 143 (165)
.+++.+++-..|.. ...+.+.+.+.|+.. .++.+ ..+..++..+|.++++..-. +.|+..
T Consensus 224 p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~-e~gg~~------- 294 (374)
T 2xci_A 224 SSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFV-NIGGHN------- 294 (374)
T ss_dssp TTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSS-SSCCCC-------
T ss_pred CCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCccc-CCCCcC-------
Confidence 45776666444432 124556666677752 34444 67899999999988875321 333321
Q ss_pred HHHHHhhCCCcEEE
Q psy2575 144 VALAAQHYSIPYPC 157 (165)
Q Consensus 144 lAl~Ak~~~vPv~V 157 (165)
.+=|-..++||++
T Consensus 295 -~lEAmA~G~PVI~ 307 (374)
T 2xci_A 295 -LLEPTCWGIPVIY 307 (374)
T ss_dssp -CHHHHTTTCCEEE
T ss_pred -HHHHHHhCCCEEE
Confidence 3556778999985
No 445
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=46.37 E-value=90 Score=23.35 Aligned_cols=39 Identities=5% Similarity=-0.093 Sum_probs=25.8
Q ss_pred chhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 116 ISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 116 m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+.+=|.+++= ...|. ..-+..++..||+.+.|++.++..
T Consensus 112 ~~~~Dvvi~i----S~SG~---t~~~~~~~~~ak~~g~~vi~iT~~ 150 (201)
T 3trj_A 112 GNEDDILLVI----TTSGD---SENILSAVEEAHDLEMKVIALTGG 150 (201)
T ss_dssp CCTTCEEEEE----CSSSC---CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCEEEEE----eCCCC---CHHHHHHHHHHHHCCCcEEEEECC
Confidence 4555666543 22342 334667888999999999998753
No 446
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=46.35 E-value=53 Score=20.98 Aligned_cols=75 Identities=11% Similarity=0.086 Sum_probs=39.6
Q ss_pred eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hch--hCCEEEEccceeecCCCeeehhcHHHHHHHHhh---
Q psy2575 77 FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LIS--RVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH--- 150 (165)
Q Consensus 77 f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~--- 150 (165)
.+|+++|..|.. ...+...|.+.|+++....+..-.. .+. +.|.+++..+. ++ ..-|-..+..+-+.
T Consensus 6 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~d~~~--~~----~~~g~~~~~~l~~~~~~ 78 (127)
T 2gkg_A 6 KKILIVESDTAL-SATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDL--SA----GQNGYLICGKLKKDDDL 78 (127)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHHTCEEEEECCHHHHHHHHHHHCCSEEEEESBC--GG----GCBHHHHHHHHHHSTTT
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhcCceEEEecCHHHHHHHHHhcCCCEEEEeCCC--CC----CCCHHHHHHHHhcCccc
Confidence 367777766532 3345666777777776555432221 222 36777776542 20 11233333333333
Q ss_pred CCCcEEEE
Q psy2575 151 YSIPYPCT 158 (165)
Q Consensus 151 ~~vPv~V~ 158 (165)
.++|++++
T Consensus 79 ~~~~ii~~ 86 (127)
T 2gkg_A 79 KNVPIVII 86 (127)
T ss_dssp TTSCEEEE
T ss_pred cCCCEEEE
Confidence 57898887
No 447
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=46.20 E-value=1.2e+02 Score=24.89 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHh--------C-CceEEEEecCCCCChHHHH-HHHHhh-----
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQ--------H-RKFQCIVMENSPENKGHEL-AVSLAK----- 99 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~--------~-~~f~ViV~Es~P~~eG~~l-a~~L~~----- 99 (165)
....+.+++..+++.....+++|-|.+..++..+..+.+ + .+-+|++.+ |.+.|... +..+..
T Consensus 106 ~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~--~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 106 SVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCK--NNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp EHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TC------------------
T ss_pred CHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEe--CCcCCcchhhhcccCCcccc
Confidence 344555555555555545667777777777777765541 1 225777775 44544322 222221
Q ss_pred cC-----CceEEEcc---chHHHhchhCCEEEEccceeecCCCee-ehhc-HHHHHHHHhhCCCcEEE
Q psy2575 100 SK-----IQTVLIPD---SAMFGLISRVNKIIIGTHTVMANGGLR-SVCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 100 ~G-----I~v~~I~d---sav~~~m~~v~~VllGAd~V~~nG~vv-nk~G-T~~lAl~Ak~~~vPv~V 157 (165)
.+ .++..++- ..+-..++.-+..++=.+-+..++|.+ -..+ --.++-+|+++++++++
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 251 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVA 251 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 11 24445542 233344421111222234455555543 2222 34577889999998876
No 448
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=46.19 E-value=44 Score=25.43 Aligned_cols=96 Identities=11% Similarity=0.044 Sum_probs=56.0
Q ss_pred EEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-----cchHHHhchhCCEEEEccce
Q psy2575 54 IILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-----DSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-----dsav~~~m~~v~~VllGAd~ 128 (165)
+|++.|.+.-+=..|......+..+|+++..+|... + ..++ .++. ...+..+++++|.|+--|-.
T Consensus 4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~-~~~~--~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-------A-EAHE--EIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-------C-CTTE--EECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-------c-CCCc--cEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 678888776664444433333558898887665421 0 1232 2221 23455667777777765532
Q ss_pred eecCCCe-----eehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 129 VMANGGL-----RSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 129 V~~nG~v-----vnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
. ..... +|-.|+..+.-+|+..+++-+|...
T Consensus 74 ~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S 109 (267)
T 3ay3_A 74 S-VERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109 (267)
T ss_dssp C-SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 2 11111 5678999999999988876555543
No 449
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=46.16 E-value=26 Score=27.63 Aligned_cols=107 Identities=13% Similarity=0.147 Sum_probs=55.5
Q ss_pred CEEEEecCCHHHHH-HHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc---cchHHHhchhCCEEEEccc
Q psy2575 53 EIILTLGYSKIVEL-FLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP---DSAMFGLISRVNKIIIGTH 127 (165)
Q Consensus 53 ~~ILT~g~S~tV~~-~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~---dsav~~~m~~v~~VllGAd 127 (165)
.+||+.|.+.-+=. +.....+ +...+|+++...+..........+...++.+.... ..++..++..+|.|+--|-
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 47888887665533 3333333 33578888765442111111122222333332221 1345566777777765543
Q ss_pred eeec-----CC---CeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 128 TVMA-----NG---GLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 128 ~V~~-----nG---~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.... +- --+|-.|+..+.-+|+.+++.|+.++
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~S 124 (348)
T 1oc2_A 85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 124 (348)
T ss_dssp CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEec
Confidence 2110 00 11466789999999998888555554
No 450
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=46.00 E-value=60 Score=21.16 Aligned_cols=78 Identities=14% Similarity=0.039 Sum_probs=38.9
Q ss_pred ceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHH-hc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHh-hC
Q psy2575 76 KFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFG-LI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQ-HY 151 (165)
Q Consensus 76 ~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~-~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak-~~ 151 (165)
+.+|+++|..|.. ...+.+.|.+.|..+....+..-.. .+ .+.|.+++..+- ++ ..|--.+..+-+ ..
T Consensus 7 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVF-RSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAM--PR-----MNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHhcCC
Confidence 4566666655542 2334556666777666554432221 22 236777776542 21 223333333333 34
Q ss_pred CCcEEEEeec
Q psy2575 152 SIPYPCTFLL 161 (165)
Q Consensus 152 ~vPv~V~~~~ 161 (165)
++|+++++..
T Consensus 79 ~~~ii~~t~~ 88 (130)
T 3eod_A 79 QTPVLVISAT 88 (130)
T ss_dssp CCCEEEEECC
T ss_pred CCCEEEEEcC
Confidence 6898888654
No 451
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=45.94 E-value=1.2e+02 Score=25.03 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=60.8
Q ss_pred CChHHHHHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHHh-----C--CceEEEEecCCCCChHHHH-HHHHhhc--
Q psy2575 33 FANPTSDTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAAQ-----H--RKFQCIVMENSPENKGHEL-AVSLAKS-- 100 (165)
Q Consensus 33 ~~~~~~~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~~-----~--~~f~ViV~Es~P~~eG~~l-a~~L~~~-- 100 (165)
+.......+++...++... ..+++|-|.|..++..|+.+.+ + .+-+|++.+ |.+.|..+ +..+...
T Consensus 84 ~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 84 MTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMK--NGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC--------------------
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEEC--CCCCCccHHHHHhcCCcc
Confidence 3344566666666666632 3566677777777777766653 2 135777664 33444332 2222211
Q ss_pred --------CCceEEEcc-------------------chHHHhch--hCCEEEEccceee-cCCC-eeehhc-HHHHHHHH
Q psy2575 101 --------KIQTVLIPD-------------------SAMFGLIS--RVNKIIIGTHTVM-ANGG-LRSVCG-THAVALAA 148 (165)
Q Consensus 101 --------GI~v~~I~d-------------------sav~~~m~--~v~~VllGAd~V~-~nG~-vvnk~G-T~~lAl~A 148 (165)
..++..++. .++-..+. .-+...+=.+.+. .+|| ++-..+ --.++-+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 112333332 22333443 1223333446676 6665 555555 45688889
Q ss_pred hhCCCcEEE
Q psy2575 149 QHYSIPYPC 157 (165)
Q Consensus 149 k~~~vPv~V 157 (165)
++|++++++
T Consensus 242 ~~~~~~lI~ 250 (448)
T 3dod_A 242 TTYDVLMIV 250 (448)
T ss_dssp HHTTCEEEE
T ss_pred HHhCCEEEE
Confidence 999998875
No 452
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=45.90 E-value=76 Score=29.06 Aligned_cols=81 Identities=9% Similarity=-0.000 Sum_probs=50.7
Q ss_pred EEEEecCCC-CC---h---HHHHHHHHhhcCCceEEEccchHHHhc--h--hCCEEEEccceeecCCCeeehhcHHHHHH
Q psy2575 78 QCIVMENSP-EN---K---GHELAVSLAKSKIQTVLIPDSAMFGLI--S--RVNKIIIGTHTVMANGGLRSVCGTHAVAL 146 (165)
Q Consensus 78 ~ViV~Es~P-~~---e---G~~la~~L~~~GI~v~~I~dsav~~~m--~--~v~~VllGAd~V~~nG~vvnk~GT~~lAl 146 (165)
+|+|+|..+ .. . -+.+...|++.|..|....+..-...+ . +.|.|++--+- ++ .-.+.-|-..+..
T Consensus 2 ~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~g~~v~~a~~g~~al~~~~~~~~~d~vilDi~l--p~-~~~~~~G~~ll~~ 78 (755)
T 2vyc_A 2 KVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQM--EH-PDEHQNVRQLIGK 78 (755)
T ss_dssp EEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTTCCCSEEEEECCC--CS-HHHHHHHHHHHHH
T ss_pred eEEEEeCCccccccccHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcCCCCcEEEEeCCC--Cc-ccccccHHHHHHH
Confidence 788888887 43 1 345688999999999988877555443 2 37888886442 32 1111233333333
Q ss_pred HHhh-CCCcEEEEeec
Q psy2575 147 AAQH-YSIPYPCTFLL 161 (165)
Q Consensus 147 ~Ak~-~~vPv~V~~~~ 161 (165)
+-+. .++||++++..
T Consensus 79 iR~~~~~iPIi~lTa~ 94 (755)
T 2vyc_A 79 LHERQQNVPVFLLGDR 94 (755)
T ss_dssp HHHHSTTCCEEEEECH
T ss_pred HHHhCCCCCEEEEecC
Confidence 3333 47999998764
No 453
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=45.78 E-value=46 Score=25.58 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=30.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
.+.++++.|.|+-+=..+......+..+|++...|......++++.+.+.|.++..+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 455667766665553333222222445666654554444555666666666555544
No 454
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=45.76 E-value=41 Score=27.19 Aligned_cols=32 Identities=9% Similarity=-0.113 Sum_probs=17.6
Q ss_pred HHHHHhhcCCceEEEccchHHHhchhCCEEEE
Q psy2575 93 LAVSLAKSKIQTVLIPDSAMFGLISRVNKIII 124 (165)
Q Consensus 93 la~~L~~~GI~v~~I~dsav~~~m~~v~~Vll 124 (165)
.++..++.|.++..|++..-+.+-+.+|.+|.
T Consensus 159 al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~ 190 (306)
T 1nri_A 159 GLQYAKSLGALTISIASNPKSEMAEIADIAIE 190 (306)
T ss_dssp HHHHHHHHTCEEEEEESSTTCHHHHHSSEEEE
T ss_pred HHHHHHHCCCEEEEEECCCCChHHHhCCEEEE
Confidence 34444455666666655544444455777664
No 455
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=45.67 E-value=30 Score=25.45 Aligned_cols=67 Identities=9% Similarity=0.008 Sum_probs=44.9
Q ss_pred cCCHHHHHHHHHHHh--C--CceEEEEecCCCCChH----HHHHHHHhhcCCceEEEccchH-HHhchhCCEEEEccc
Q psy2575 59 GYSKIVELFLKNAAQ--H--RKFQCIVMENSPENKG----HELAVSLAKSKIQTVLIPDSAM-FGLISRVNKIIIGTH 127 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~--~~f~ViV~Es~P~~eG----~~la~~L~~~GI~v~~I~dsav-~~~m~~v~~VllGAd 127 (165)
++|...+.+|.+..+ + .+|+|.-.-+.|...| ....+.|++.||+.. -.-..+ ...+.+ |.||.=.+
T Consensus 16 cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~~~~~~~-DlIi~Md~ 91 (163)
T 1u2p_A 16 CRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVGTEHLAA-DLLVALDR 91 (163)
T ss_dssp SHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCCHHHHTS-SEEEESSH
T ss_pred hHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECChhhccC-CEEEEeCH
Confidence 688898999987765 2 3588888777774333 456888999999987 322223 234566 88776533
No 456
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=45.61 E-value=1e+02 Score=24.73 Aligned_cols=108 Identities=8% Similarity=-0.021 Sum_probs=55.5
Q ss_pred HHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc---------
Q psy2575 40 TAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS--------- 110 (165)
Q Consensus 40 ~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds--------- 110 (165)
...+..++++...+.|++-+.+..+...+..+.-++.-+|++.+ |.+.+ ....+...|.++..++..
T Consensus 67 ~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~--~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~d~~ 142 (399)
T 2oga_A 67 GFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPS--HTYIA--SWLAVSATGATPVPVEPHEDHPTLDPL 142 (399)
T ss_dssp HHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES--SSCTH--HHHHHHHTTCEEEEECBCSSSSSBCHH
T ss_pred HHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECC--CccHH--HHHHHHHCCCEEEEEecCCCCCCcCHH
Confidence 33344444555446676655554444444433123344677664 45555 334455678888887632
Q ss_pred hHHHhchhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 AMFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 av~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+.+-.++++- . -+.|.+.. --.++-+|+++++++++
T Consensus 143 ~l~~~i~~~~~~v~~-~--n~tG~~~~---l~~i~~l~~~~~~~li~ 183 (399)
T 2oga_A 143 LVEKAITPRTRALLP-V--HLYGHPAD---MDALRELADRHGLHIVE 183 (399)
T ss_dssp HHHHHCCTTEEEECC-B--CGGGCCCC---HHHHHHHHHHHTCEECE
T ss_pred HHHHhcCCCCeEEEE-e--CCcCCccC---HHHHHHHHHHcCCEEEE
Confidence 122223221233331 1 12333221 35678889999988876
No 457
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=45.49 E-value=30 Score=23.07 Aligned_cols=79 Identities=11% Similarity=0.132 Sum_probs=44.7
Q ss_pred CceEEEEecCCCCChHHHHHHHHhhcC-CceEEEccchHHH-hc--hhCCEEEEccceeecCCCeeehhcHHHHHHHHhh
Q psy2575 75 RKFQCIVMENSPENKGHELAVSLAKSK-IQTVLIPDSAMFG-LI--SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQH 150 (165)
Q Consensus 75 ~~f~ViV~Es~P~~eG~~la~~L~~~G-I~v~~I~dsav~~-~m--~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~ 150 (165)
...+|+++|..|.. ...+...|.+.| +++....+..-.. .+ .+.|.|++..+ +++ .-|.-.+..+-+.
T Consensus 13 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~-----~~g~~~~~~l~~~ 84 (135)
T 3snk_A 13 KRKQVALFSSDPNF-KRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLG--GGD-----LLGKPGIVEARAL 84 (135)
T ss_dssp CCEEEEEECSCHHH-HHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEE--TTG-----GGGSTTHHHHHGG
T ss_pred CCcEEEEEcCCHHH-HHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCC--CCC-----chHHHHHHHHHhh
Confidence 45678888776653 234566777788 8877665543222 22 23788887643 332 1233333333333
Q ss_pred -CCCcEEEEeec
Q psy2575 151 -YSIPYPCTFLL 161 (165)
Q Consensus 151 -~~vPv~V~~~~ 161 (165)
.++|+++++..
T Consensus 85 ~~~~~ii~~s~~ 96 (135)
T 3snk_A 85 WATVPLIAVSDE 96 (135)
T ss_dssp GTTCCEEEEESC
T ss_pred CCCCcEEEEeCC
Confidence 37999988754
No 458
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=45.47 E-value=91 Score=25.63 Aligned_cols=100 Identities=10% Similarity=0.022 Sum_probs=50.7
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHH-HHHHH-hhcCCceEEEccchHHHh----chhCCEEEEcc
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHE-LAVSL-AKSKIQTVLIPDSAMFGL----ISRVNKIIIGT 126 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~-la~~L-~~~GI~v~~I~dsav~~~----m~~v~~VllGA 126 (165)
++++|.|.+...+..+....-++.-+|++.+ |.+.... ..+.+ ...|+++..++... +.+ +..-+++++-.
T Consensus 127 ~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~--~~h~s~~~~~~~~a~~~G~~v~~v~~~~-~~~d~~~i~~~t~~v~i~ 203 (438)
T 1wyu_A 127 NASMYDGATALAEGVLLALRETGRMGVLVSQ--GVHPEYRAVLRAYLEAVGAKLLTLPLEG-GRTPLPEVGEEVGAVVVQ 203 (438)
T ss_dssp CSCBSSHHHHHHHHHHHHHHHHTCCEEEEET--TSCHHHHHHHHHHHHHTTCEEEEECCBT-TBCCCCCCCTTEEEEEEE
T ss_pred ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcC--ccCHhHHHHHHHHHHHCCCEEEEEcCcC-CccCHHHhCCCeEEEEEE
Confidence 3456666553323333222113445777764 4443322 22232 44799988887311 000 21112333333
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.. ...|.+. . -..++-+|++++++++|-+
T Consensus 204 ~p-n~tG~~~-~--l~~i~~la~~~g~~vivd~ 232 (438)
T 1wyu_A 204 NP-NFLGALE-D--LGPFAEAAHGAGALFVAVA 232 (438)
T ss_dssp SS-CTTSBCC-C--HHHHHHHHHHTTCEEEEEC
T ss_pred CC-CCCeEEe-c--HHHHHHHHHHcCCEEEEEe
Confidence 33 5555444 2 3568888999999988654
No 459
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=45.43 E-value=1.1e+02 Score=24.06 Aligned_cols=116 Identities=12% Similarity=0.006 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccc----
Q psy2575 35 NPTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDS---- 110 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~ds---- 110 (165)
...++.+++.-. .+....+++|-|.+..+...+.... ++.-+|++.+ |.+.+.. ..+...|.++..++-.
T Consensus 66 ~~l~~~la~~~~-~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~ 139 (375)
T 3op7_A 66 PAFKKSVSQLYT-GVKPEQILQTNGATGANLLVLYSLI-EPGDHVISLY--PTYQQLY--DIPKSLGAEVDLWQIEEENG 139 (375)
T ss_dssp HHHHHHHHTTSS-SCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEE--SSCTHHH--HHHHHTTCEEEEEEEEGGGT
T ss_pred HHHHHHHHHHhc-cCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeC--CCchhHH--HHHHHcCCEEEEEeccccCC
Confidence 455666665321 1333567777766666555555443 3444666653 5555432 3355678777766522
Q ss_pred ------hHHHhc-hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 111 ------AMFGLI-SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 111 ------av~~~m-~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
.+...+ ++...|++- ..-.+.|.+...---..++-+|+++++++++
T Consensus 140 ~~~d~~~l~~~l~~~~~~v~~~-~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 140 WLPDLEKLRQLIRPTTKMICIN-NANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp TEECHHHHHHHCCTTCCEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCHHHHHHhhccCCeEEEEc-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 233333 245555543 2234556666555567788899999998886
No 460
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=45.34 E-value=27 Score=27.59 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=33.8
Q ss_pred EEEecCCHHHHHHHHHHHh-----CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 55 ILTLGYSKIVELFLKNAAQ-----HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~-----~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
++++..+++|+.|+....+ -+..+++++ |...++.|.+.|+++..+++
T Consensus 213 ~v~ftS~~~v~~f~~~~~~~~~~~l~~~~i~aI-------G~~Ta~~l~~~G~~~~~va~ 265 (286)
T 1jr2_A 213 SITFFSPSGLTYSLKHIQELSGDNIDQIKFAAI-------GPTTARALAAQGLPVSCTAE 265 (286)
T ss_dssp EEEESSHHHHHHHHHHHHHHHGGGGGGSEEEES-------SHHHHHHHHHTTCCCSEECS
T ss_pred EEEEEChHHHHHHHHHHhhhccccccCCEEEEE-------CHHHHHHHHHcCCCceEecC
Confidence 4455555688888875543 134566665 88899999999998877664
No 461
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=45.28 E-value=67 Score=21.55 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=25.1
Q ss_pred CCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 119 VNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 119 v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+|.+++|+. . |+ ..+.|+. .--+.++.++||+++-+
T Consensus 103 ~dliV~G~~---~-~~-~~~lgs~-~~~vl~~~~~pVlvv~~ 138 (141)
T 1jmv_A 103 VDLLVTGHH---Q-DF-WSKLMSS-TRQVMNTIKIDMLVVPL 138 (141)
T ss_dssp CCEEEEEEC---C-CC-HHHHHHH-HHHHHTTCCSEEEEEEC
T ss_pred CCEEEEeCC---C-ch-hhhhcch-HHHHHhcCCCCEEEeeC
Confidence 999999987 2 22 3446743 44566778899999743
No 462
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=45.28 E-value=53 Score=26.87 Aligned_cols=16 Identities=38% Similarity=0.549 Sum_probs=13.1
Q ss_pred HHHHhhCCCcEEEEee
Q psy2575 145 ALAAQHYSIPYPCTFL 160 (165)
Q Consensus 145 Al~Ak~~~vPv~V~~~ 160 (165)
+++|++.++|++.+..
T Consensus 109 ~~~A~~lgiP~v~~~~ 124 (404)
T 3h4t_A 109 RSMAEKLGIPYRYTVL 124 (404)
T ss_dssp HHHHHHHTCCEEEEES
T ss_pred hhHHhhcCCCEEEEEc
Confidence 6789999999987654
No 463
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=45.26 E-value=95 Score=26.83 Aligned_cols=89 Identities=15% Similarity=0.228 Sum_probs=53.4
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhc-CCceEEEccchHHHhc-----hhCCEEEEc
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKS-KIQTVLIPDSAMFGLI-----SRVNKIIIG 125 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~-GI~v~~I~dsav~~~m-----~~v~~VllG 125 (165)
.+.|+..|+++.-..+.....+ ....|+++|..|. .++.+++. |+++.+- |..-...+ .+++.+++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~-~~~~vvvid~~~~-----~~~~~~~~~~~~~i~G-d~~~~~~L~~a~i~~a~~vi~- 198 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLES-RNHLFVVVTDNYD-----QALHLEEQEGFKVVYG-SPTDAHVLAGLRVAAARSIIA- 198 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTT-TTCCEEEEESCHH-----HHHHHHHSCSSEEEES-CTTCHHHHHHTTGGGCSEEEE-
T ss_pred CCeEEEECCChHHHHHHHHHHH-CCCCEEEEECCHH-----HHHHHHHhcCCeEEEe-CCCCHHHHHhcCcccCCEEEE-
Confidence 4678888998766665554443 4456777877653 45667777 8776543 44333333 45777765
Q ss_pred cceeecCCCeeehhcHHHHHHHHhhCC-CcEEE
Q psy2575 126 THTVMANGGLRSVCGTHAVALAAQHYS-IPYPC 157 (165)
Q Consensus 126 Ad~V~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V 157 (165)
+. +. .=...+++.||..+ +|+++
T Consensus 199 t~-----~D----~~n~~~~~~ar~~~~~~iia 222 (565)
T 4gx0_A 199 NL-----SD----PDNANLCLTVRSLCQTPIIA 222 (565)
T ss_dssp CS-----CH----HHHHHHHHHHHTTCCCCEEE
T ss_pred eC-----Cc----HHHHHHHHHHHHhcCceEEE
Confidence 21 12 22456788888876 34433
No 464
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=45.20 E-value=41 Score=27.08 Aligned_cols=16 Identities=25% Similarity=0.225 Sum_probs=12.6
Q ss_pred HHHHHhhCCCcEEEEe
Q psy2575 144 VALAAQHYSIPYPCTF 159 (165)
Q Consensus 144 lAl~Ak~~~vPv~V~~ 159 (165)
.+++|+..++|++...
T Consensus 136 ~~~~a~~~giP~v~~~ 151 (398)
T 4fzr_A 136 GPLVAATLGIPWIEQS 151 (398)
T ss_dssp HHHHHHHHTCCEEEEC
T ss_pred HHHHHHhhCCCEEEec
Confidence 4677889999988754
No 465
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=45.09 E-value=33 Score=25.14 Aligned_cols=68 Identities=12% Similarity=0.061 Sum_probs=45.2
Q ss_pred cCCHHHHHHHHHHHh--C--Cc-eEEEEecCCCCChH----HHHHHHHhhcCCceEEEccchHH-HhchhCCEEEEccc
Q psy2575 59 GYSKIVELFLKNAAQ--H--RK-FQCIVMENSPENKG----HELAVSLAKSKIQTVLIPDSAMF-GLISRVNKIIIGTH 127 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~--~~-f~ViV~Es~P~~eG----~~la~~L~~~GI~v~~I~dsav~-~~m~~v~~VllGAd 127 (165)
++|...+.+|.+... + .+ ++|.-.-+.|...| ....+.|++.||+.. -.-..+. ..+.+.|.||.=.+
T Consensus 19 cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar~l~~~~~~~~DlIl~M~~ 96 (161)
T 1d1q_A 19 CRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQIKTKHFDEYDYIIGMDE 96 (161)
T ss_dssp SHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBCBCCGGGGGTCSEEEESSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEeECCHHHHhhCCEEEEeCH
Confidence 688899999987765 3 23 88887777664333 456888999999876 3222232 23456788876543
No 466
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=45.04 E-value=41 Score=24.91 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=25.2
Q ss_pred HHHhchhCCEEEEccceeecCCCeeehhcHHHHHHH-----HhhCCCcEEEEe
Q psy2575 112 MFGLISRVNKIIIGTHTVMANGGLRSVCGTHAVALA-----AQHYSIPYPCTF 159 (165)
Q Consensus 112 v~~~m~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~-----Ak~~~vPv~V~~ 159 (165)
...-+.++|.+++|+=.. +|++-...=++.=-+. ..-.++|+.+++
T Consensus 72 ~~~~l~~aD~ii~gsP~y--~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~ 122 (211)
T 1ydg_A 72 TPADLEWAEAIVFSSPTR--FGGATSQMRAFIDTLGGLWSSGKLANKTFSAMT 122 (211)
T ss_dssp CHHHHHHCSEEEEEEEEE--TTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEE
T ss_pred HHHHHHHCCEEEEEcCcc--ccCccHHHHHHHHHhccccccccCCCCEEEEEE
Confidence 344577899999997654 3555444322221111 113578877654
No 467
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=44.98 E-value=90 Score=26.34 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHhcccCC--CCEEEEecCCHHHHHHHHHHHh-----C--CceEEEEecCCCCChHHHH-HHHHhhc----
Q psy2575 35 NPTSDTAPSQACEHIHS--NEIILTLGYSKIVELFLKNAAQ-----H--RKFQCIVMENSPENKGHEL-AVSLAKS---- 100 (165)
Q Consensus 35 ~~~~~~Ia~~a~~~I~~--~~~ILT~g~S~tV~~~L~~A~~-----~--~~f~ViV~Es~P~~eG~~l-a~~L~~~---- 100 (165)
.....++++..+++... ..++++-|.|..++..++-+.+ + .+-+|++.+. .+.|..+ +..+...
T Consensus 98 ~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~--~yHg~t~~~~~~~~~~~~~ 175 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKN--AYHGSTVASSALGGMAGMH 175 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETT--CCCCSSHHHHHHSCCHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC--cCCCccHHhhhccCChhhc
Confidence 34455666666666543 2566666777777777776654 1 3456776653 3444333 2222110
Q ss_pred -----CCceEEEc--c------------------chHHHhchh---CCEEEEccceeecCCCeee-hhcH-HHHHHHHhh
Q psy2575 101 -----KIQTVLIP--D------------------SAMFGLISR---VNKIIIGTHTVMANGGLRS-VCGT-HAVALAAQH 150 (165)
Q Consensus 101 -----GI~v~~I~--d------------------sav~~~m~~---v~~VllGAd~V~~nG~vvn-k~GT-~~lAl~Ak~ 150 (165)
.-.+..++ . ..+-..+.+ -+...+=.+.+...||.+. ..+- -.++-+|++
T Consensus 176 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~ 255 (472)
T 3hmu_A 176 AQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDK 255 (472)
T ss_dssp HTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHH
T ss_pred cccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHH
Confidence 01233343 1 223333432 1233333445777776654 4443 347788999
Q ss_pred CCCcEEE
Q psy2575 151 YSIPYPC 157 (165)
Q Consensus 151 ~~vPv~V 157 (165)
+++.+++
T Consensus 256 ~gillI~ 262 (472)
T 3hmu_A 256 YDILLIA 262 (472)
T ss_dssp TTCEEEE
T ss_pred cCCEEEE
Confidence 9998775
No 468
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=44.98 E-value=1.2e+02 Score=24.19 Aligned_cols=119 Identities=14% Similarity=0.059 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHhccc--CCCCEEEEecCCHHHHHHHHHHHh-CCceEEEEecCCCCChHH-HHHHHHhhcCC-------
Q psy2575 34 ANPTSDTAPSQACEHI--HSNEIILTLGYSKIVELFLKNAAQ-HRKFQCIVMENSPENKGH-ELAVSLAKSKI------- 102 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I--~~~~~ILT~g~S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~-~la~~L~~~GI------- 102 (165)
.....+.+.+..++++ ....+++|-|.+..+...+..+.. .++-+|++.+. .+.|. ..+..+ .|.
T Consensus 85 ~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~--~y~~~~~~~~~~--~g~~~~~~~~ 160 (395)
T 1vef_A 85 PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMR--GFSGRTMGSLSV--TWEPKYREPF 160 (395)
T ss_dssp CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETT--CCCCSSHHHHHT--CCCHHHHGGG
T ss_pred CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcC--CcCCCchhhhhh--cCCccccccc
Confidence 3445666666666677 444566666666666666654421 12346777753 22221 111112 222
Q ss_pred -----ceEEEc--c-chHHHhchhCCEEEEccceeecC-CCeeehhc-HHHHHHHHhhCCCcEEE
Q psy2575 103 -----QTVLIP--D-SAMFGLISRVNKIIIGTHTVMAN-GGLRSVCG-THAVALAAQHYSIPYPC 157 (165)
Q Consensus 103 -----~v~~I~--d-sav~~~m~~v~~VllGAd~V~~n-G~vvnk~G-T~~lAl~Ak~~~vPv~V 157 (165)
++..++ | ..+-..+.+-.++++ ...+..+ |.+....+ -..++-+|+++++++++
T Consensus 161 ~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~-~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~ 224 (395)
T 1vef_A 161 LPLVEPVEFIPYNDVEALKRAVDEETAAVI-LEPVQGEGGVRPATPEFLRAAREITQEKGALLIL 224 (395)
T ss_dssp CSCSSCEEEECTTCHHHHHHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCeeEeCCCcHHHHHHHhccCEEEEE-EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 243333 1 233334433234444 3444443 44444333 45678889999998876
No 469
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=44.94 E-value=70 Score=24.83 Aligned_cols=62 Identities=13% Similarity=-0.010 Sum_probs=36.3
Q ss_pred HHHhhcCCceEEEc---cchHHHhc-----hhCCEEEEccceeecCCCeeeh-hcHHHHHHHHhhCCCcEEEEee
Q psy2575 95 VSLAKSKIQTVLIP---DSAMFGLI-----SRVNKIIIGTHTVMANGGLRSV-CGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 95 ~~L~~~GI~v~~I~---dsav~~~m-----~~v~~VllGAd~V~~nG~vvnk-~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
+.+...|++++... ......++ .++|.+++|...-. ++-.. .|+..- -+.++.++||+++-+
T Consensus 80 ~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~---~~~~~~~Gs~~~-~vl~~~~~PVlvv~~ 150 (319)
T 3olq_A 80 RYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHD---KLGSLIFTPLDW-QLLRKCPAPVWMVKD 150 (319)
T ss_dssp HHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC-----CCSCBCCHHHH-HHHHHCSSCEEEEES
T ss_pred HHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCc---hhhcccccccHH-HHHhcCCCCEEEecC
Confidence 34446788776543 23333333 24899999997532 22222 466654 445777899999853
No 470
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=44.78 E-value=85 Score=23.42 Aligned_cols=23 Identities=9% Similarity=-0.155 Sum_probs=18.6
Q ss_pred hcHHHHHHHHhhCCCcEEEEeec
Q psy2575 139 CGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 139 ~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
.-+..++..||+.+.|++.++..
T Consensus 145 ~~~i~~~~~ak~~G~~vIaIT~~ 167 (212)
T 2i2w_A 145 ANVIKAIAAAREKGMKVITLTGK 167 (212)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHHHCCCeEEEEECC
Confidence 44677888999999999988764
No 471
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=44.72 E-value=69 Score=21.54 Aligned_cols=65 Identities=6% Similarity=-0.058 Sum_probs=35.5
Q ss_pred HHHHhhcCCceEEEccchH-HHhchhCCEEEEccceeecCCCeeeh--hcHHHHHHHHhhCCCcEEEEee
Q psy2575 94 AVSLAKSKIQTVLIPDSAM-FGLISRVNKIIIGTHTVMANGGLRSV--CGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 94 a~~L~~~GI~v~~I~dsav-~~~m~~v~~VllGAd~V~~nG~vvnk--~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
++.|.+.|++++++..... ..-+.++|.+++|+-.. +|+.... +-.+.=-+...-.++|+.+++-
T Consensus 21 ~~~l~~~g~~v~~~~~~~~~~~~l~~~d~vi~g~p~y--~~~~~~~~~~~~fl~~l~~~l~~k~~~~~~t 88 (137)
T 2fz5_A 21 EAAVKAAGADVESVRFEDTNVDDVASKDVILLGCPAM--GSEELEDSVVEPFFTDLAPKLKGKKVGLFGS 88 (137)
T ss_dssp HHHHHHTTCCEEEEETTSCCHHHHHTCSEEEEECCCB--TTTBCCHHHHHHHHHHHGGGCSSCEEEEEEE
T ss_pred HHHHHhCCCeEEEEEcccCCHHHHhcCCEEEEEcccc--CCCCCCHHHHHHHHHHhhhhcCCCEEEEEEe
Confidence 4445556888877754332 23467899999997543 2344333 2222211112235788887653
No 472
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=44.71 E-value=1.1e+02 Score=23.79 Aligned_cols=102 Identities=13% Similarity=0.185 Sum_probs=53.0
Q ss_pred EEEEecCCHHHHHHHHHHHh-----CCceEEE-EecCCCCC------------hHHH-H---HHHHhh--cCCceEE--E
Q psy2575 54 IILTLGYSKIVELFLKNAAQ-----HRKFQCI-VMENSPEN------------KGHE-L---AVSLAK--SKIQTVL--I 107 (165)
Q Consensus 54 ~ILT~g~S~tV~~~L~~A~~-----~~~f~Vi-V~Es~P~~------------eG~~-l---a~~L~~--~GI~v~~--I 107 (165)
+++-+..|..-...|..|.+ +.+++++ |.+..+.. +.++ + ...|.+ .|++++. .
T Consensus 174 Ilv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 253 (309)
T 3cis_A 174 VLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVV 253 (309)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEESCSSCCTTCSSCCHHHHHHHHHHHHHHHHTTHHHHCTTSCEEEEEE
T ss_pred EEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEEEeecccccCCCcccHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEE
Confidence 44446777765555555543 4566655 43433211 1111 2 222323 4776654 3
Q ss_pred ccc---hHHHhchhCCEEEEccceeecCCCeee-hhcHHHHHHHHhhCCCcEEEEe
Q psy2575 108 PDS---AMFGLISRVNKIIIGTHTVMANGGLRS-VCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 108 ~ds---av~~~m~~v~~VllGAd~V~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
... .+..+..++|.+++|+..- |++-. -.|+..-. +.++..+||+++=
T Consensus 254 ~g~~~~~I~~~a~~adliV~G~~~~---~~~~~~l~Gsv~~~-vl~~~~~pVlvv~ 305 (309)
T 3cis_A 254 RDQPARQLVQRSEEAQLVVVGSRGR---GGYAGMLVGSVGET-VAQLARTPVIVAR 305 (309)
T ss_dssp SSCHHHHHHHHHTTCSEEEEESSCS---SCCTTCSSCHHHHH-HHHHCSSCEEEEC
T ss_pred cCCHHHHHHHhhCCCCEEEECCCCC---CCccccccCcHHHH-HHhcCCCCEEEeC
Confidence 222 2333345799999998752 22221 14554433 4467789999874
No 473
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=44.64 E-value=1.4e+02 Score=25.03 Aligned_cols=94 Identities=10% Similarity=0.073 Sum_probs=54.2
Q ss_pred CEEEEecCCHHHHHHHHHHHhCCceEEE-EecCCCCChHHHHHHHHhhcCCc-eEEEc--cchHHHhch--hCCEEEEcc
Q psy2575 53 EIILTLGYSKIVELFLKNAAQHRKFQCI-VMENSPENKGHELAVSLAKSKIQ-TVLIP--DSAMFGLIS--RVNKIIIGT 126 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~~~~f~Vi-V~Es~P~~eG~~la~~L~~~GI~-v~~I~--dsav~~~m~--~v~~VllGA 126 (165)
-.|..+|.+..-...+....+...+++. |++..|. ....+++.+.+.|++ +.... +.....++. ++|.|++..
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~-~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPY-MVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHH-HHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHH-HHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 4788889886555555544444567765 6665543 234556666667864 34343 113455554 599999875
Q ss_pred ceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 127 HTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 127 d~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
-.-. -+.+++.|-+.+++|++
T Consensus 100 p~~~----------h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 100 PWEW----------HHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp CGGG----------HHHHHHHHHHTTCEEEE
T ss_pred CcHH----------HHHHHHHHHHCCCeEEE
Confidence 2111 14566666667776665
No 474
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=44.59 E-value=38 Score=26.74 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=55.3
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc--c-chHHHhch--hCCEEEEc
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP--D-SAMFGLIS--RVNKIIIG 125 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~--d-sav~~~m~--~v~~VllG 125 (165)
.+.+||+.|.|.-+=..|......+..+|+++..++...- .+...| .++.+.... | .++..++. ++|.|+--
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR-EVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG-GGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch-hhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 3568888888766644333333323467877754332211 111111 233222111 1 23555666 66766655
Q ss_pred cceeecCC-----CeeehhcHHHHHHHHhhCCCcEEEEee
Q psy2575 126 THTVMANG-----GLRSVCGTHAVALAAQHYSIPYPCTFL 160 (165)
Q Consensus 126 Ad~V~~nG-----~vvnk~GT~~lAl~Ak~~~vPv~V~~~ 160 (165)
|-....+. --+|-.|+..++-+|+..+++-+|...
T Consensus 96 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~S 135 (330)
T 2pzm_A 96 AAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQ 135 (330)
T ss_dssp CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 42211100 124678999999999888875555443
No 475
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=44.59 E-value=28 Score=26.90 Aligned_cols=55 Identities=9% Similarity=0.057 Sum_probs=38.4
Q ss_pred cccCCCCEEEEecCCHHHHHHHHHHHh-C---CceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 47 EHIHSNEIILTLGYSKIVELFLKNAAQ-H---RKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 47 ~~I~~~~~ILT~g~S~tV~~~L~~A~~-~---~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
..+.+.|.|+-.| ...|..|+....+ + +..+++++ |...++.|++.|+++.+.++
T Consensus 54 ~~l~~~d~vifTS-~~aV~~~~~~l~~~~~~~~~~~i~aV-------G~~Ta~~L~~~G~~~~~~~~ 112 (254)
T 4es6_A 54 LDLDRYCAVVVVS-KPAARLGLERLDRYWPQPPQQTWCSV-------GAATAAILEAYGLDVTYPEQ 112 (254)
T ss_dssp HTGGGCSEEEECS-HHHHHHHHHHHHHHCSSCCSCEEEES-------SHHHHHHHHHHTCCEECCSS
T ss_pred HhccCCCEEEEEC-HHHHHHHHHHHHHhCCCcccCEEEEE-------CHHHHHHHHHcCCCcccCCC
Confidence 3345556544444 3478888776654 2 33567766 88999999999999998875
No 476
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=44.51 E-value=74 Score=24.75 Aligned_cols=60 Identities=20% Similarity=0.218 Sum_probs=39.1
Q ss_pred HHHHHHHhCCceEEEEecCCCCCh--HHHHHHHHhh----cCCceEEEc-cchHHHhchh------CCEEEEcc
Q psy2575 66 LFLKNAAQHRKFQCIVMENSPENK--GHELAVSLAK----SKIQTVLIP-DSAMFGLISR------VNKIIIGT 126 (165)
Q Consensus 66 ~~L~~A~~~~~f~ViV~Es~P~~e--G~~la~~L~~----~GI~v~~I~-dsav~~~m~~------v~~VllGA 126 (165)
.++..+.++++. |++.-..|... |..+++.|.+ .|+++++|| -|++.++... -+..+++.
T Consensus 70 ~li~~~~~G~~V-v~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~s~ 142 (251)
T 3nut_A 70 HALEMAAEGRRV-VVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAINL 142 (251)
T ss_dssp HHHHHHHTTCEE-EEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEEEEES
T ss_pred HHHHHHHCCCeE-EEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeEEEEe
Confidence 345555556654 44558889754 5678999998 899999999 4554444332 25566554
No 477
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=44.44 E-value=63 Score=21.19 Aligned_cols=37 Identities=19% Similarity=0.421 Sum_probs=27.9
Q ss_pred CCceEEEEec-CCCCChHHHHHHHHhhc----CCceEEEccc
Q psy2575 74 HRKFQCIVME-NSPENKGHELAVSLAKS----KIQTVLIPDS 110 (165)
Q Consensus 74 ~~~f~ViV~E-s~P~~eG~~la~~L~~~----GI~v~~I~ds 110 (165)
+.++.++++| .-|...|.++++.|++. .+++.+++..
T Consensus 49 ~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 49 NADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp CTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 4467788776 56888999999999873 4777777753
No 478
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=44.41 E-value=1.3e+02 Score=24.79 Aligned_cols=122 Identities=13% Similarity=0.083 Sum_probs=64.0
Q ss_pred ChHHHHHHHHHHhcccC--CCCEEEEecCCHHHHHHHHHHHh-------CCceEEEEecCCCCChHHHH-HHHHhh----
Q psy2575 34 ANPTSDTAPSQACEHIH--SNEIILTLGYSKIVELFLKNAAQ-------HRKFQCIVMENSPENKGHEL-AVSLAK---- 99 (165)
Q Consensus 34 ~~~~~~~Ia~~a~~~I~--~~~~ILT~g~S~tV~~~L~~A~~-------~~~f~ViV~Es~P~~eG~~l-a~~L~~---- 99 (165)
.....+++++..+++.. ...+++|-|.|..++..|+.+.+ ..+-+|++.+ |.+.|..+ +..+..
T Consensus 93 ~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~~ 170 (460)
T 3gju_A 93 GTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRW--RGYHGSGVMTGSLTGLDLF 170 (460)
T ss_dssp CCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TCCCCSSHHHHHHCCCGGG
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEC--CCcCCCCHHHhhccCCccc
Confidence 34456666666666553 23567777777777777776653 1345666654 33333322 222211
Q ss_pred ------cCCceEEEc--c-------------------chHHHhchh---CCEEEEccceeecCCCe-eehhc-HHHHHHH
Q psy2575 100 ------SKIQTVLIP--D-------------------SAMFGLISR---VNKIIIGTHTVMANGGL-RSVCG-THAVALA 147 (165)
Q Consensus 100 ------~GI~v~~I~--d-------------------sav~~~m~~---v~~VllGAd~V~~nG~v-vnk~G-T~~lAl~ 147 (165)
.+-.+..++ . ..+-..+.+ -+...+=.+.+..+||. +-..+ --.++-+
T Consensus 171 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l 250 (460)
T 3gju_A 171 HNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAV 250 (460)
T ss_dssp TTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 111344443 1 233334432 12222333456666665 44445 3457889
Q ss_pred HhhCCCcEEE
Q psy2575 148 AQHYSIPYPC 157 (165)
Q Consensus 148 Ak~~~vPv~V 157 (165)
|++|++.+++
T Consensus 251 ~~~~~~llI~ 260 (460)
T 3gju_A 251 LKKYDVLLVA 260 (460)
T ss_dssp HHHTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9999998875
No 479
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=44.40 E-value=96 Score=26.54 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=39.1
Q ss_pred CEEEEecCCHH----HHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 53 EIILTLGYSKI----VELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 53 ~~ILT~g~S~t----V~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
..|+.+|-..+ +.++|. .+.++|.+.|.++. ...+.|.+.|+++..-.+. ..++.+|.|+++.
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~----~~G~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~---~~~~~a~~vv~s~ 86 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLA----NEGYQISGSDLAPN----PVTQQLMNLGATIYFNHRP---ENVRDASVVVVSS 86 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHH----HTTCEEEEECSSCC----HHHHHHHHTTCEEESSCCG---GGGTTCSEEEECT
T ss_pred CEEEEEEcCHHHHHHHHHHHH----hCCCeEEEECCCCC----HHHHHHHHCCCEEECCCCH---HHcCCCCEEEECC
Confidence 45777654432 333443 25689999998773 2456788899988543332 2246678777775
No 480
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=44.15 E-value=59 Score=25.07 Aligned_cols=96 Identities=9% Similarity=0.001 Sum_probs=52.9
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhc--------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLI--------S 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m--------~ 117 (165)
.+.++++.|.|+-+=..+......+..+|+++..++ ....++++.|.+.|.++..+. | ..+..++ .
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE-KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467888888877663333322222446788775443 233456677777676665543 3 2233333 3
Q ss_pred hCCEEEEccceeecCCCe-------------eehhcHHHHHHHH
Q psy2575 118 RVNKIIIGTHTVMANGGL-------------RSVCGTHAVALAA 148 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~A 148 (165)
++|.++--|-. ...+.+ +|-.|++.++.++
T Consensus 99 ~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 141 (273)
T 1ae1_A 99 KLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 141 (273)
T ss_dssp CCCEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCcEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 56666655532 222211 4677888877666
No 481
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=44.11 E-value=50 Score=26.17 Aligned_cols=109 Identities=11% Similarity=0.017 Sum_probs=55.4
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHh-hcCCceEEEc--c-chHHHhchh--CCEEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLA-KSKIQTVLIP--D-SAMFGLISR--VNKIII 124 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~-~~GI~v~~I~--d-sav~~~m~~--v~~Vll 124 (165)
.+.+||+.|.+.-+=..|......+..+|+++.-+|... ..+...+. ..++.+.... | .++..++.. +|.|+-
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-chhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 356888888776664433333222446788776554321 11222222 1233332221 1 244555655 677665
Q ss_pred ccceeecC--------CCeeehhcHHHHHHHHhhCC-CcEEEEee
Q psy2575 125 GTHTVMAN--------GGLRSVCGTHAVALAAQHYS-IPYPCTFL 160 (165)
Q Consensus 125 GAd~V~~n--------G~vvnk~GT~~lAl~Ak~~~-vPv~V~~~ 160 (165)
-|-....+ ---+|-.|+..+.-+|+..+ ++-+|...
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 131 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 131 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 54311100 00146788999998888875 65555443
No 482
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=44.05 E-value=1.1e+02 Score=23.69 Aligned_cols=115 Identities=12% Similarity=0.039 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHH-HHHHHHhhcCCceEEEcc-----
Q psy2575 36 PTSDTAPSQACEHIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGH-ELAVSLAKSKIQTVLIPD----- 109 (165)
Q Consensus 36 ~~~~~Ia~~a~~~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~-~la~~L~~~GI~v~~I~d----- 109 (165)
..++.+++ ++...+.++|-|.+......+. +.-++.-+|++.+ |.+.+. ..+......|.++..+.+
T Consensus 42 ~l~~~la~----~~g~~~~~~~~~gt~a~~~~~~-~~~~~gd~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 42 ELERLAAE----TFGKEAALFVPSGTMGNQVSIM-AHTQRGDEVILEA--DSHIFWYEVGAMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp HHHHHHHH----HHTCSEEEEESCHHHHHHHHHH-HHCCTTCEEEEET--TCHHHHSSTTHHHHHTCCEEEEECEETTEE
T ss_pred HHHHHHHH----HhCCceEEEecCcHHHHHHHHH-HhcCCCCEEEEcC--cchhhhccccchhhccCeEEEEecCCCCcc
Confidence 33444544 4444456777666554443333 3223445777753 443221 111233446777766632
Q ss_pred --chHHHhchh------CCEEEEccceeecCCCeeehh-cHHHHHHHHhhCCCcEEE
Q psy2575 110 --SAMFGLISR------VNKIIIGTHTVMANGGLRSVC-GTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 110 --sav~~~m~~------v~~VllGAd~V~~nG~vvnk~-GT~~lAl~Ak~~~vPv~V 157 (165)
..+...+.+ -.++++=...--+.||.+... =-..++-+|+++++++++
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~ 171 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHI 171 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEe
Confidence 122233332 112222111111222333332 234677889999999876
No 483
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=44.01 E-value=1.1e+02 Score=23.54 Aligned_cols=70 Identities=11% Similarity=0.202 Sum_probs=41.2
Q ss_pred EEEecCCHHHHHHHHHHHhCC-ceEEE-EecCCCCChHHHHHHHHhhcCCceEEEccc----------hHHHhch--hCC
Q psy2575 55 ILTLGYSKIVELFLKNAAQHR-KFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPDS----------AMFGLIS--RVN 120 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~-~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~ds----------av~~~m~--~v~ 120 (165)
|+..|..+....+|....++. .++|. |+-.+|...+.+.| .+.|||+..+... .+...++ +.|
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A---~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~D 84 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERA---ARENVPAFVFSPKDYPSKAAFESEILRELKGRQID 84 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH---HHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCC
Confidence 455577777677776655542 45553 33344555555444 4579999876532 3444444 478
Q ss_pred EEEEccc
Q psy2575 121 KIIIGTH 127 (165)
Q Consensus 121 ~VllGAd 127 (165)
.+++.+-
T Consensus 85 liv~a~y 91 (212)
T 3av3_A 85 WIALAGY 91 (212)
T ss_dssp EEEESSC
T ss_pred EEEEchh
Confidence 8887653
No 484
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=43.99 E-value=49 Score=25.51 Aligned_cols=56 Identities=7% Similarity=0.079 Sum_probs=26.7
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
|.++++.|.|+-+=..+......+..+|++...++......+++.+.+.|-++..+
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI 73 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 45666666555442222222212345666655554444445555565555444433
No 485
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=43.99 E-value=1e+02 Score=23.43 Aligned_cols=102 Identities=12% Similarity=0.118 Sum_probs=51.9
Q ss_pred EEEecCCHHHHHHHHHHHhCCc-eEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhch-----hCCEEEEccce
Q psy2575 55 ILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLIS-----RVNKIIIGTHT 128 (165)
Q Consensus 55 ILT~g~S~tV~~~L~~A~~~~~-f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~-----~v~~VllGAd~ 128 (165)
||+.|.+.-+=..|......+. .+|+++...+...- ...+....+..-+-....+..++. ++|.|+--|-.
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---hhhcCcceeccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 6667766555333333322233 67777755443221 112222223343433344555565 37777755432
Q ss_pred eecC-CC-----eeehhcHHHHHHHHhhCCCcEEEEe
Q psy2575 129 VMAN-GG-----LRSVCGTHAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 129 V~~n-G~-----vvnk~GT~~lAl~Ak~~~vPv~V~~ 159 (165)
.... .. -+|-.|+..+.-+|+..++.++.+.
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 115 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYAS 115 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 2110 00 1356789999999998888555444
No 486
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=43.93 E-value=98 Score=23.66 Aligned_cols=77 Identities=6% Similarity=0.018 Sum_probs=44.1
Q ss_pred CCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch-------
Q psy2575 50 HSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS------- 117 (165)
Q Consensus 50 ~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~------- 117 (165)
..+.++++.|.|+-+=..+......+..+|++...+...........+.+.|-++.++. | ..+..++.
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35677888887776644443333345677888776655555555666666665555443 2 22333332
Q ss_pred hCCEEEEcc
Q psy2575 118 RVNKIIIGT 126 (165)
Q Consensus 118 ~v~~VllGA 126 (165)
++|.++-.|
T Consensus 103 ~id~li~nA 111 (269)
T 3gk3_A 103 KVDVLINNA 111 (269)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 577777665
No 487
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=43.76 E-value=28 Score=25.70 Aligned_cols=70 Identities=10% Similarity=0.057 Sum_probs=44.9
Q ss_pred cCCHHHHHHHHHHHh--C--CceEEEEecCCCCChH----HHHHHHHhhcCCceEEEccchHHHhchhCCEEEEccce
Q psy2575 59 GYSKIVELFLKNAAQ--H--RKFQCIVMENSPENKG----HELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGTHT 128 (165)
Q Consensus 59 g~S~tV~~~L~~A~~--~--~~f~ViV~Es~P~~eG----~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGAd~ 128 (165)
++|...+.+|.+..+ + ..|+|.-.-+.|...| ....+.|++.||+....+-.--...+.+.|.||.=.+.
T Consensus 17 cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIi~M~~~ 94 (157)
T 3n8i_A 17 CRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDFATFDYILCMDES 94 (157)
T ss_dssp SHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHHHHCSEEEESSHH
T ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCCceeECCHHHcCCCCEEEEeCcH
Confidence 678898999987765 2 2588887777775333 46688899999985322211112334567887765443
No 488
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=43.57 E-value=40 Score=27.37 Aligned_cols=19 Identities=21% Similarity=0.148 Sum_probs=13.7
Q ss_pred HHHHHHHHhhCCCcEEEEe
Q psy2575 141 THAVALAAQHYSIPYPCTF 159 (165)
Q Consensus 141 T~~lAl~Ak~~~vPv~V~~ 159 (165)
|.+.|.+|+++++|+..++
T Consensus 218 ~~pea~lAr~~gi~~~~I~ 236 (277)
T 1vmk_A 218 TVPEVIAAKHCGLKVVVFS 236 (277)
T ss_dssp SHHHHHHHHHHTCEEEEEE
T ss_pred hHHHHHHHHHCCCCEEEEE
Confidence 4677777888888877654
No 489
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=43.53 E-value=81 Score=26.03 Aligned_cols=110 Identities=11% Similarity=-0.063 Sum_probs=59.5
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCc-eEEEEecCCCCChHHHHHHHHhhc----CCceEEEc----cch-HHHhc--hh
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRK-FQCIVMENSPENKGHELAVSLAKS----KIQTVLIP----DSA-MFGLI--SR 118 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~-f~ViV~Es~P~~eG~~la~~L~~~----GI~v~~I~----dsa-v~~~m--~~ 118 (165)
.+.+||+.|.+..+=..|.+....+. .+|++++..+. .-..+...|.+. +.++.++. |.. +..++ .+
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISEN-NMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHH-HHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcc-hHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 36788888877666443433333233 57887765432 123345555542 23444432 222 22333 35
Q ss_pred CCEEEEccceeec----------CCCeeehhcHHHHHHHHhhCCCcEEEEeec
Q psy2575 119 VNKIIIGTHTVMA----------NGGLRSVCGTHAVALAAQHYSIPYPCTFLL 161 (165)
Q Consensus 119 v~~VllGAd~V~~----------nG~vvnk~GT~~lAl~Ak~~~vPv~V~~~~ 161 (165)
+|.|+--|-.... ..--+|-.||..++-+|+.++++-+|...+
T Consensus 113 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS 165 (399)
T 3nzo_A 113 YDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVST 165 (399)
T ss_dssp CSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 7776644321100 011246689999999999999876665443
No 490
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=43.52 E-value=88 Score=25.54 Aligned_cols=116 Identities=9% Similarity=-0.026 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHhc--ccCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCc---------
Q psy2575 35 NPTSDTAPSQACE--HIHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQ--------- 103 (165)
Q Consensus 35 ~~~~~~Ia~~a~~--~I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~--------- 103 (165)
...++.|++.... -+....+++|-|.+..+..+ .... ++.-+|++. .|.+.+...+ +...|.+
T Consensus 114 ~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~-~~gd~Vl~~--~p~~~~~~~~--~~~~g~~g~~~~~~~~ 187 (449)
T 3qgu_A 114 GALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMF-GSKPTVAVQ--DPSYPVYVDT--SVMMGMTGDHNGTGFD 187 (449)
T ss_dssp HHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHH-CSSSCEEEE--ESCCTHHHHH--HHHHTCSCCBCSSSBT
T ss_pred HHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHh-CCCCEEEEc--CCCChhHHHH--HHHcCCcccccccccc
Confidence 4667777765421 12345677777766555444 3332 334456665 4666665433 2334544
Q ss_pred -eEEEccchHHHhc------hhCCEEEEccceeecCCCeeehhcHHHHHHHHhhCCCcEEE
Q psy2575 104 -TVLIPDSAMFGLI------SRVNKIIIGTHTVMANGGLRSVCGTHAVALAAQHYSIPYPC 157 (165)
Q Consensus 104 -v~~I~dsav~~~m------~~v~~VllGAd~V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 157 (165)
+..++...-..+. ++...|++. ..--+.|.+...---..++-+|+++++.+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~-~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~ 247 (449)
T 3qgu_A 188 GIEYMVCNPDNHFFPDLSKAKRTDIIFFC-SPNNPTGAAATRAQLTELVNFARKNGSILVY 247 (449)
T ss_dssp TEEEEECCGGGTTCCCGGGCCCCSEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eeEEEecccccCCcCChhHcCCCCEEEEe-CCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 6665533221111 345556554 3334456666555556677888999988875
No 491
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=43.24 E-value=74 Score=21.72 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=50.9
Q ss_pred CCEEEEecCCHHHHHHHHHHHhCCceEEE-EecCCCCChHHHHHHHHhhcCCceEEEccchHHHhch--hCCEEEEccce
Q psy2575 52 NEIILTLGYSKIVELFLKNAAQHRKFQCI-VMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLIS--RVNKIIIGTHT 128 (165)
Q Consensus 52 ~~~ILT~g~S~tV~~~L~~A~~~~~f~Vi-V~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~--~v~~VllGAd~ 128 (165)
...++.+|.+.....++....+...|+++ +++..|...|.. -.|+++.- . ..+..+++ ++|.|++....
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~------i~g~pV~g-~-~~l~~~~~~~~id~viia~~~ 75 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTT------MQGITIYR-P-KYLERLIKKHCISTVLLAVPS 75 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCE------ETTEEEEC-G-GGHHHHHHHHTCCEEEECCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCE------ecCeEEEC-H-HHHHHHHHHCCCCEEEEeCCC
Confidence 45688888888777776666554467765 455555443322 14666543 2 33444443 36777765321
Q ss_pred eecCCCeeehhcHHHHHHHHhhCCCcEEEE
Q psy2575 129 VMANGGLRSVCGTHAVALAAQHYSIPYPCT 158 (165)
Q Consensus 129 V~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 158 (165)
. ...--..+...++..+++|+++
T Consensus 76 ----~---~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 76 ----A---SQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp ----S---CHHHHHHHHHHHHTTTCEEEEC
T ss_pred ----C---CHHHHHHHHHHHHHcCCeEEEC
Confidence 0 1112234556667777877764
No 492
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=43.21 E-value=45 Score=23.87 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=32.2
Q ss_pred CCCCEEEEecC-CHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhc
Q psy2575 50 HSNEIILTLGY-SKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKS 100 (165)
Q Consensus 50 ~~~~~ILT~g~-S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~ 100 (165)
-+.++|-|.|. |......+..+.+ .-.||+. +.|.+.|.++.+.|.+.
T Consensus 25 ~~~~iI~t~Gsi~~~~l~~I~~~~~--~r~VIi~-TD~D~~GekIRk~i~~~ 73 (119)
T 2fcj_A 25 EPVVIVCTNGTISDARLEELADELE--GYDVYLL-ADADEAGEKLRRQFRRM 73 (119)
T ss_dssp SCCEEEECCSCCCHHHHHHHHHHTT--TSEEEEE-CCSSHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHHHHHhc--CCCEEEE-ECCCccHHHHHHHHHHH
Confidence 47789999886 4444445555543 3345544 67889999999887763
No 493
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=42.94 E-value=1e+02 Score=26.16 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=40.0
Q ss_pred CCEEEEecCCHH----HHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEccchHHHhchhCCEEEEcc
Q psy2575 52 NEIILTLGYSKI----VELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPDSAMFGLISRVNKIIIGT 126 (165)
Q Consensus 52 ~~~ILT~g~S~t----V~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~dsav~~~m~~v~~VllGA 126 (165)
...|+.+|...+ +.++|.. +.++|.+.|.++. ...+.|.+.|+++..-.+.. .++.+|.|++..
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~----~G~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~a~~vv~s~ 85 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLN----EGYQISGSDIADG----VVTQRLAQAGAKIYIGHAEE---HIEGASVVVVSS 85 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH----HTCEEEEEESCCS----HHHHHHHHTTCEEEESCCGG---GGTTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHHh----CCCEEEEECCCCC----HHHHHHHhCCCEEECCCCHH---HcCCCCEEEECC
Confidence 346777654432 3344432 3478999988774 24567889999886544432 346678887775
No 494
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=42.92 E-value=60 Score=25.83 Aligned_cols=48 Identities=19% Similarity=0.243 Sum_probs=33.3
Q ss_pred HHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEc-cchHHHh
Q psy2575 67 FLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIP-DSAMFGL 115 (165)
Q Consensus 67 ~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~-dsav~~~ 115 (165)
++..++++++ -|++....|.. -|..+++.|.+.|+++++|| -|++.++
T Consensus 85 l~~~~~~G~~-Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa 135 (280)
T 1s4d_A 85 LVELARAGNR-VLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGG 135 (280)
T ss_dssp HHHHHHTTCC-EEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHH
T ss_pred HHHHHhCCCe-EEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHH
Confidence 4444444554 45566799974 56788999999999999999 4444443
No 495
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=42.87 E-value=38 Score=25.79 Aligned_cols=107 Identities=9% Similarity=-0.032 Sum_probs=55.4
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-cc----hHHHhc--------h
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-DS----AMFGLI--------S 117 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-ds----av~~~m--------~ 117 (165)
.+.+|++.|.|+-+=..+......+..+|+++...+ .....+...|.+.|.++.++. |- .+..++ .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE-YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 466788888776663333322222446777775432 233455666766665555442 32 233333 4
Q ss_pred hCCEEEEccceeecCCC-------------eeehhcHHHHHHHH----hhCCCcEEEEe
Q psy2575 118 RVNKIIIGTHTVMANGG-------------LRSVCGTHAVALAA----QHYSIPYPCTF 159 (165)
Q Consensus 118 ~v~~VllGAd~V~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~~ 159 (165)
++|.++--|-. ...+. -+|-.|+..+..++ +..+.+-+|..
T Consensus 92 ~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 149 (266)
T 1xq1_A 92 KLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFM 149 (266)
T ss_dssp CCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCcEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 56777755532 22221 14667888887776 34445555443
No 496
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=42.78 E-value=66 Score=24.65 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCceEEEEecCCCCC--hHHHHHHHHhhcCCceEEEcc-chHHHh
Q psy2575 65 ELFLKNAAQHRKFQCIVMENSPEN--KGHELAVSLAKSKIQTVLIPD-SAMFGL 115 (165)
Q Consensus 65 ~~~L~~A~~~~~f~ViV~Es~P~~--eG~~la~~L~~~GI~v~~I~d-sav~~~ 115 (165)
..++..++++++. +++....|.. -|..+++.|.+.|++++.||- |++.++
T Consensus 66 ~~i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa 118 (239)
T 1va0_A 66 RLLLRHARAHPFV-VRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS 118 (239)
T ss_dssp HHHHHHHHTSSEE-EEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT
T ss_pred HHHHHHHHCCCcE-EEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc
Confidence 3344445445554 4457788874 567889999999999999994 444433
No 497
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=42.67 E-value=1e+02 Score=24.01 Aligned_cols=46 Identities=9% Similarity=0.120 Sum_probs=26.6
Q ss_pred CEEEEecCCHHHHHHHHHHHh--CCceEEEEecCCCCChHHHHHHHHhhc
Q psy2575 53 EIILTLGYSKIVELFLKNAAQ--HRKFQCIVMENSPENKGHELAVSLAKS 100 (165)
Q Consensus 53 ~~ILT~g~S~tV~~~L~~A~~--~~~f~ViV~Es~P~~eG~~la~~L~~~ 100 (165)
..+++.++++... .+....+ +....+.+.+.. ..+|...++.+.+.
T Consensus 14 ~ii~i~~~~~L~~-~~~~i~~e~~~~~~I~vi~~~-le~av~~a~~~~~~ 61 (225)
T 2pju_A 14 PVIWTVSVTRLFE-LFRDISLEFDHLANITPIQLG-FEKAVTYIRKKLAN 61 (225)
T ss_dssp CEEEEECCHHHHH-HHHHHHTTTTTTCEEEEECCC-HHHHHHHHHHHTTT
T ss_pred CEEEEEchHHHHH-HHHHHHHhhCCCceEEEecCc-HHHHHHHHHHHHhc
Confidence 5778888886554 4444443 334566666533 34566777665443
No 498
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=42.65 E-value=68 Score=24.05 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=31.6
Q ss_pred CCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEE
Q psy2575 51 SNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLI 107 (165)
Q Consensus 51 ~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I 107 (165)
.+.++++.|.|+-+=..+....-.+..+|++...++.....+.++.+.+.+-.+..+
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEE
Confidence 356677777665553322222222446677666666555666667776666555444
No 499
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=42.63 E-value=36 Score=25.65 Aligned_cols=54 Identities=15% Similarity=-0.009 Sum_probs=31.4
Q ss_pred EEEecC-CHHHHHHHHHHHh-CCceEEEEecCCCCChHHHHHHHHhhcCCceEEEcc
Q psy2575 55 ILTLGY-SKIVELFLKNAAQ-HRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIPD 109 (165)
Q Consensus 55 ILT~g~-S~tV~~~L~~A~~-~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~d 109 (165)
|.+|.. +..+...|..|++ |-+.+|++.. ............|.+.||++.....
T Consensus 64 i~~y~~~~~~i~~aL~~aa~rGV~Vrii~D~-~~~~~~~~~~~~l~~~gi~v~~~~~ 119 (196)
T 4ggj_A 64 LCLFAFSSPQLGRAVQLLHQRGVRVRVITDC-DYMALNGSQIGLLRKAGIQVRHDQD 119 (196)
T ss_dssp EEESCBCCHHHHHHHHHHHHTTCEEEEEESS-CCC---CCHHHHHHHTTCEEEECCS
T ss_pred EEEEEeCCHHHHHHHHHHHHcCCcEEEEEec-ccccccHHHHHHHHhcCCCcccccc
Confidence 344443 3456667777765 7777777633 2222222346779999999876543
No 500
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=42.60 E-value=56 Score=25.39 Aligned_cols=100 Identities=9% Similarity=0.073 Sum_probs=55.6
Q ss_pred cCCCCEEEEecCCHHHHHHHHHHHhCCceEEEEecCCCCChHHHHHHHHhhcCCceEEEc-c----chHHHhch------
Q psy2575 49 IHSNEIILTLGYSKIVELFLKNAAQHRKFQCIVMENSPENKGHELAVSLAKSKIQTVLIP-D----SAMFGLIS------ 117 (165)
Q Consensus 49 I~~~~~ILT~g~S~tV~~~L~~A~~~~~f~ViV~Es~P~~eG~~la~~L~~~GI~v~~I~-d----sav~~~m~------ 117 (165)
...+.++|+.|.|+-+=..+....-.+..+|+++..++ .....+++.|.+.|.++..+. | .++..++.
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA-KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34577888888887663333322222456788775432 344566788888787766553 2 22333333
Q ss_pred -hCCEEEEccceeecCCCe-------------eehhcHHHHHHHHhh
Q psy2575 118 -RVNKIIIGTHTVMANGGL-------------RSVCGTHAVALAAQH 150 (165)
Q Consensus 118 -~v~~VllGAd~V~~nG~v-------------vnk~GT~~lAl~Ak~ 150 (165)
++|.++--|- +...+.+ +|-.|++.++.++..
T Consensus 100 g~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 145 (279)
T 3sju_A 100 GPIGILVNSAG-RNGGGETADLDDALWADVLDTNLTGVFRVTREVLR 145 (279)
T ss_dssp CSCCEEEECCC-CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCcEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhc
Confidence 4677776553 2332322 577888888776543
Done!