Query psy2576
Match_columns 80
No_of_seqs 117 out of 1010
Neff 6.7
Searched_HMMs 13730
Date Fri Aug 16 19:43:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2576.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2576hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t9ka_ c.124.1.5 (A:) Probabl 99.9 1.2E-24 8.8E-29 155.8 4.6 76 3-80 248-324 (340)
2 g1w2w.1 c.124.1.5 (A:,B:) Puta 99.9 1.1E-24 7.9E-29 158.8 3.7 76 3-80 287-385 (402)
3 d2a0ua1 c.124.1.5 (A:10-383) I 99.9 5.5E-24 4E-28 153.7 5.3 76 3-80 272-353 (374)
4 d1t5oa_ c.124.1.5 (A:) Putativ 99.8 1.6E-22 1.2E-26 144.5 4.1 75 3-80 248-323 (340)
5 d1vb5a_ c.124.1.5 (A:) Putativ 99.8 2E-20 1.4E-24 130.6 4.7 65 3-80 201-265 (274)
6 d1hi9a_ c.99.1.1 (A:) Zn-depen 49.7 1.5 0.00011 29.0 -0.2 25 4-28 137-161 (274)
7 d1kbla2 c.8.1.1 (A:377-509) Py 44.7 3 0.00022 24.5 0.7 24 4-27 80-103 (133)
8 d1h6za2 c.8.1.1 (A:406-537) Py 41.2 4.6 0.00034 23.6 1.1 22 4-25 78-99 (132)
9 d1vbga2 c.8.1.1 (A:383-517) Py 41.2 4.6 0.00033 23.7 1.1 22 4-25 77-98 (135)
10 d1jysa_ c.56.2.1 (A:) 5'-Methy 39.6 5.5 0.0004 24.2 1.4 24 2-25 176-199 (230)
11 d1to6a_ c.141.1.1 (A:) Glycera 37.6 6.8 0.0005 26.7 1.7 23 4-27 302-324 (371)
12 d1zyma2 c.8.1.2 (A:3-21,A:145- 36.6 3.5 0.00025 23.8 0.0 18 4-21 65-82 (124)
13 d1odka_ c.56.2.1 (A:) Purine n 28.4 6.8 0.00049 23.8 0.4 19 2-20 182-200 (234)
14 d1vhwa_ c.56.2.1 (A:) Purine n 27.6 7.1 0.00052 24.0 0.4 21 2-22 183-203 (237)
15 d3etja2 c.30.1.1 (A:1-78) N5-c 26.3 9.1 0.00066 20.3 0.6 18 4-21 16-33 (78)
16 d2ac7a1 c.56.2.1 (A:2-232) Pur 24.7 8.7 0.00063 23.6 0.4 21 2-22 182-202 (231)
17 d1kjqa2 c.30.1.1 (A:2-112) Gly 23.6 19 0.0014 19.9 1.7 25 4-29 26-50 (111)
18 g3bzy.1 d.367.1.1 (A:246-262,B 21.9 12 0.00088 20.8 0.6 10 7-16 52-61 (100)
19 d1wkva1 c.79.1.1 (A:2-383) O-a 21.6 14 0.001 24.9 1.0 20 2-21 157-176 (382)
20 d1x6aa1 g.39.1.3 (A:8-41) Lim 21.2 11 0.00077 17.2 0.2 13 14-27 21-33 (34)
21 d1ybfa_ c.56.2.1 (A:) AMP nucl 20.6 19 0.0014 22.4 1.4 20 2-21 185-204 (246)
No 1
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]}
Probab=99.89 E-value=1.2e-24 Score=155.81 Aligned_cols=76 Identities=20% Similarity=0.252 Sum_probs=69.6
Q ss_pred hHhhhhccCCCcEEEECccCcccCcCCCCCCCcccccccCCcccccccccc-ccCceeeeccceeecCCCCeeEEeeCC
Q psy2576 3 CLGSNLCSPVYQVIVLAPLYKLSPQFLCSYDQDTFNNFISPEKVLSYEHRD-LVSKVQVFNPEYDYVPPELVSLFISNT 80 (80)
Q Consensus 3 ~~A~~Ak~~~vPv~V~a~~~K~~~~~~~~~~~~~~~e~~~p~~vl~~~~~~-~~~~~~v~nP~fD~tPpelIt~~ITe~ 80 (80)
-+|++||+|+|||||+||+|||++.++. +++..+|+|+|+|+..+.+.. .+++++++||+||||||+|||+||||.
T Consensus 248 ~~A~~A~~~~vP~~V~a~~~k~~~~~~~--~~~~~ie~r~~~ev~~~~~~~~~~~~~~v~np~fD~tP~~lIt~iiTe~ 324 (340)
T d1t9ka_ 248 SLAVLAKRNNIPFYVAAPVSTIDPTIRS--GEEIPIEERRPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAIITEK 324 (340)
T ss_dssp HHHHHHHHTTCCEEEECCGGGEETTCSS--GGGSCCCBCCTHHHHEETTEECSCTTCEECCBSEEEECGGGCSEEEETT
T ss_pred HHHHHHHhcCCcEEEEeeccCcCCCCCC--cCcccccccCHHHccccCCcEeCCCCCCeeCcCccCCCHHHCCEEECCC
Confidence 3789999999999999999999999998 899999999999999887643 357899999999999999999999984
No 2
>g1w2w.1 c.124.1.5 (A:,B:) Putative methylthioribose-1-phosphate isomerase Ypr118W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=1.1e-24 Score=158.76 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=67.2
Q ss_pred hHhhhhccCCCcEEEECccCcccCcCCCCCCCcccccccCCccccccccc-----------------------cccCcee
Q psy2576 3 CLGSNLCSPVYQVIVLAPLYKLSPQFLCSYDQDTFNNFISPEKVLSYEHR-----------------------DLVSKVQ 59 (80)
Q Consensus 3 ~~A~~Ak~~~vPv~V~a~~~K~~~~~~~~~~~~~~~e~~~p~~vl~~~~~-----------------------~~~~~~~ 59 (80)
.+|++||+|+||||||||+|||++.++. ++++.+|+|+|+|+..+.+. ..+++++
T Consensus 287 ~~A~~Ak~~~vPv~V~a~~~k~~~~~~~--~~~i~iE~r~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (402)
T g1w2w.1 287 QLAVICKQFGIKFFVVAPKTTIDNVTET--GDDIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEIN 364 (402)
T ss_dssp HHHHHHHHHTCEEEEECCGGGBCSSCCS--GGGCCCCBCCTHHHHEEEEEEBCTTTCCBCBCTTSCBCEEEEECSCTTCE
T ss_pred HHHHHHHHcCCceEEEecccccCcCCCC--ccccccccCCHHHhhhccCccccccccccccccccccccccceecCCCCC
Confidence 5899999999999999999999999999 99999999999998755421 1236799
Q ss_pred eeccceeecCCCCeeEEeeCC
Q psy2576 60 VFNPEYDYVPPELVSLFISNT 80 (80)
Q Consensus 60 v~nP~fD~tPpelIt~~ITe~ 80 (80)
++||+||+|||+|||+||||.
T Consensus 365 v~Np~fDvTP~~lI~~iITE~ 385 (402)
T g1w2w.1 365 VWNPAFDITPHELIDGIITEE 385 (402)
T ss_dssp ECCBSEEEECGGGCSEEEETT
T ss_pred eeCcCccCCCHHHCCEEECCC
Confidence 999999999999999999985
No 3
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]}
Probab=99.88 E-value=5.5e-24 Score=153.69 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=67.4
Q ss_pred hHhhhhccCCCcEEEECccCcccCcCCCCCCCcccccccCCcccccccccc-----ccCceeeeccceeecCCCCee-EE
Q psy2576 3 CLGSNLCSPVYQVIVLAPLYKLSPQFLCSYDQDTFNNFISPEKVLSYEHRD-----LVSKVQVFNPEYDYVPPELVS-LF 76 (80)
Q Consensus 3 ~~A~~Ak~~~vPv~V~a~~~K~~~~~~~~~~~~~~~e~~~p~~vl~~~~~~-----~~~~~~v~nP~fD~tPpelIt-~~ 76 (80)
.+|++||+|+|||||+||+|||++.++. +++..+|+|+|+|++...... ..++++++||+||||||+||| +|
T Consensus 272 ~~A~~A~~~~vP~~v~a~~~k~~~~~~~--~~~i~ie~r~~~ev~~~~~~~~~~~~~~~~~~v~np~fD~tP~~lIt~~i 349 (374)
T d2a0ua1 272 NLAVSAKFHGVKLYVAAPTTTLDVKTAS--GNHVEIEEREPTEITTNLVTKQRVVADGPHLSIWNPVFDITPSELITGGI 349 (374)
T ss_dssp HHHHHHHHTTCCEEEECCGGGBCTTCCS--GGGSCCCBCCTHHHHBCTTTCCBCSCCCTTEEECCBSEEEECGGGCCSEE
T ss_pred HHHHHHHHcCCCEEEEecccccCcCCCC--CCcccccCCChHHccccccccceeccCCCCcceeCcCccCCChHHcCCEE
Confidence 5899999999999999999999999998 999999999999998754321 135799999999999999999 99
Q ss_pred eeCC
Q psy2576 77 ISNT 80 (80)
Q Consensus 77 ITe~ 80 (80)
|||.
T Consensus 350 iTe~ 353 (374)
T d2a0ua1 350 ITEK 353 (374)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 9984
No 4
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.85 E-value=1.6e-22 Score=144.51 Aligned_cols=75 Identities=20% Similarity=0.199 Sum_probs=65.1
Q ss_pred hHhhhhccCCCcEEEECccCcccCcCCCCCCCcccccccCCcccccccccc-ccCceeeeccceeecCCCCeeEEeeCC
Q psy2576 3 CLGSNLCSPVYQVIVLAPLYKLSPQFLCSYDQDTFNNFISPEKVLSYEHRD-LVSKVQVFNPEYDYVPPELVSLFISNT 80 (80)
Q Consensus 3 ~~A~~Ak~~~vPv~V~a~~~K~~~~~~~~~~~~~~~e~~~p~~vl~~~~~~-~~~~~~v~nP~fD~tPpelIt~~ITe~ 80 (80)
.+|++||+|+|||||+|++|||++... ..+..+|.|+++|+..+.+.. .+++++++||+||||||+|||+||||.
T Consensus 248 ~~A~~Ak~~~vP~~V~~~~~k~~~~~~---~~~i~ie~~~~~e~~~~~~~~~~~~~~~v~np~fD~tP~~lI~~iiTe~ 323 (340)
T d1t5oa_ 248 TVSVVAKHHNIPFYVAAPKATFDWERT---AKDVVIEERPREELIFCGKRQIAPLNVKVYNPAFDPTPLENVTALITEY 323 (340)
T ss_dssp HHHHHHHHTTCCEEEECCGGGBCTTCC---GGGCCCCBCCTHHHHEETTEECSCTTCEECCBSEEEEEGGGCSEEEETT
T ss_pred HHHHHHHHhCCcEEEEeccccccccCC---ccccccccCCHHHhcccCCeeecCCCCCeeCcCccCCCHHHCCEEECCC
Confidence 478999999999999999999997753 455678999999998876543 357899999999999999999999995
No 5
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.79 E-value=2e-20 Score=130.60 Aligned_cols=65 Identities=18% Similarity=0.188 Sum_probs=54.0
Q ss_pred hHhhhhccCCCcEEEECccCcccCcCCCCCCCcccccccCCccccccccccccCceeeeccceeecCCCCeeEEeeCC
Q psy2576 3 CLGSNLCSPVYQVIVLAPLYKLSPQFLCSYDQDTFNNFISPEKVLSYEHRDLVSKVQVFNPEYDYVPPELVSLFISNT 80 (80)
Q Consensus 3 ~~A~~Ak~~~vPv~V~a~~~K~~~~~~~~~~~~~~~e~~~p~~vl~~~~~~~~~~~~v~nP~fD~tPpelIt~~ITe~ 80 (80)
.+|++||+|+|||||+|++|||++.++. ++...+| ++. ..++++++||.||+|||+|||+||||.
T Consensus 201 ~~A~~Ak~~~vP~~V~a~~~k~~~~~~~--~~~~~~e-~~~----------~~~~~~v~np~fD~tP~~lI~~iiTE~ 265 (274)
T d1vb5a_ 201 LLALACHENAIPFYVAAETYKFHPTLKS--GDVMLME-RDL----------IRGNVRIRNVLFDVTPWKYVRGIITEL 265 (274)
T ss_dssp HHHHHHHHTTCCEEEECCGGGBCSSCCG--GGCCCCB-CCC----------EETTEECCCBCEEEECGGGCSEEEETT
T ss_pred HHHHHHHHcCCCceEeccccccCCCCCC--CCcceee-cCC----------CCCCceeeCcCccCCCHHHCCEEECCC
Confidence 4789999999999999999999999887 6544333 321 136799999999999999999999995
No 6
>d1hi9a_ c.99.1.1 (A:) Zn-dependent D-aminopeptidase DppA {Bacillus subtilis [TaxId: 1423]}
Probab=49.69 E-value=1.5 Score=29.02 Aligned_cols=25 Identities=8% Similarity=-0.184 Sum_probs=21.2
Q ss_pred HhhhhccCCCcEEEECccCcccCcC
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLSPQF 28 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~~~~ 28 (80)
-|.+|.++||||..++|..+++..-
T Consensus 137 na~~Ag~~gVPV~lVsGDd~~~~e~ 161 (274)
T d1hi9a_ 137 NAYVAGYYDVPVLMVAGDDRAAKEA 161 (274)
T ss_dssp HHHHHHHTTCCEEEEEEEHHHHHHH
T ss_pred HHHHHHhcCCCEEEEecCHHHHHHH
Confidence 3678899999999999999887643
No 7
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]}
Probab=44.71 E-value=3 Score=24.50 Aligned_cols=24 Identities=4% Similarity=-0.215 Sum_probs=20.5
Q ss_pred HhhhhccCCCcEEEECccCcccCc
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLSPQ 27 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~~~ 27 (80)
.|++|+++++|.+|-|+..+++..
T Consensus 80 aAivaRelGiP~VvG~~~~~id~~ 103 (133)
T d1kbla2 80 AAVVARGMGTCCVSGCGEIKINEE 103 (133)
T ss_dssp HHHHHHHHTCEEEECCTTCEEETT
T ss_pred HHHhhhhcCccEEEeccccccccc
Confidence 478999999999999998877653
No 8
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]}
Probab=41.24 E-value=4.6 Score=23.55 Aligned_cols=22 Identities=0% Similarity=-0.357 Sum_probs=18.8
Q ss_pred HhhhhccCCCcEEEECccCccc
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLS 25 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~ 25 (80)
.|++|+++++|.+|-++.-+..
T Consensus 78 aAivARelgiP~VvG~~~at~~ 99 (132)
T d1h6za2 78 AAVVARGMGKCCVSGCGDMVIR 99 (132)
T ss_dssp HHHHHHHTTCCEEECCTTCEES
T ss_pred HHHHHhhcCCceEecccceEEe
Confidence 4789999999999999877664
No 9
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]}
Probab=41.22 E-value=4.6 Score=23.67 Aligned_cols=22 Identities=0% Similarity=-0.312 Sum_probs=18.3
Q ss_pred HhhhhccCCCcEEEECccCccc
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLS 25 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~ 25 (80)
.|++|+++++|.+|-++..+++
T Consensus 77 aAivARelgiP~VvG~~~~~~~ 98 (135)
T d1vbga2 77 AAVVARGWGKCCVSGCSGIRVN 98 (135)
T ss_dssp HHHHHHHTTCCEEECCTTEEEE
T ss_pred HHHHHHhcCCceEecccccccc
Confidence 4789999999999999875544
No 10
>d1jysa_ c.56.2.1 (A:) 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase {Escherichia coli [TaxId: 562]}
Probab=39.60 E-value=5.5 Score=24.20 Aligned_cols=24 Identities=4% Similarity=0.067 Sum_probs=19.0
Q ss_pred chHhhhhccCCCcEEEECccCccc
Q psy2576 2 PCLGSNLCSPVYQVIVLAPLYKLS 25 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~~~K~~ 25 (80)
+++|.+|+.+++|++++..-..+.
T Consensus 176 aa~a~va~~~~ip~~~ir~ISD~~ 199 (230)
T d1jysa_ 176 TAIAHVCHNFNVPFVVVRAISDVA 199 (230)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEEEEEEcCC
Confidence 467889999999999888755543
No 11
>d1to6a_ c.141.1.1 (A:) Glycerate kinase GlxK {Neisseria meningitidis, (serogroup A) [TaxId: 487]}
Probab=37.63 E-value=6.8 Score=26.73 Aligned_cols=23 Identities=4% Similarity=-0.119 Sum_probs=17.2
Q ss_pred HhhhhccCCCcEEEECccCcccCc
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLSPQ 27 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~~~ 27 (80)
+|-+|| +++|++++|++......
T Consensus 302 va~~ak-~~~pviai~G~v~~~~~ 324 (371)
T d1to6a_ 302 VAKRTP-VGVPVVAICGSLVEDLP 324 (371)
T ss_dssp HHTTSC-TTCCEEEEESEECTTCC
T ss_pred HHHHHh-CCCCEEEEECccCCChh
Confidence 444565 68999999999876543
No 12
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]}
Probab=36.57 E-value=3.5 Score=23.78 Aligned_cols=18 Identities=17% Similarity=-0.191 Sum_probs=15.3
Q ss_pred HhhhhccCCCcEEEECcc
Q psy2576 4 LGSNLCSPVYQVIVLAPL 21 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~ 21 (80)
.|++|+++++|.+|-++.
T Consensus 65 ~AIlAR~lgIP~vvg~~~ 82 (124)
T d1zyma2 65 TSIMARSLELPAIVGTGS 82 (124)
T ss_dssp HHHHHHHHTCCEECCCSC
T ss_pred HHHHHHHcCCCEEEEccc
Confidence 589999999999987753
No 13
>d1odka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermus thermophilus [TaxId: 274]}
Probab=28.41 E-value=6.8 Score=23.83 Aligned_cols=19 Identities=5% Similarity=-0.342 Sum_probs=16.6
Q ss_pred chHhhhhccCCCcEEEECc
Q psy2576 2 PCLGSNLCSPVYQVIVLAP 20 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~ 20 (80)
++++.+|+.+|+|+.+++-
T Consensus 182 aa~~~va~~~gi~~~~i~~ 200 (234)
T d1odka_ 182 SALFLLGRMRGVRTGAILA 200 (234)
T ss_dssp HHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEE
Confidence 5789999999999998874
No 14
>d1vhwa_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Vibrio cholerae [TaxId: 666]}
Probab=27.61 E-value=7.1 Score=24.00 Aligned_cols=21 Identities=0% Similarity=-0.092 Sum_probs=17.7
Q ss_pred chHhhhhccCCCcEEEECccC
Q psy2576 2 PCLGSNLCSPVYQVIVLAPLY 22 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~~~ 22 (80)
+++|.+|+.+++|+.++....
T Consensus 183 aaia~v~~~~~v~~~~i~~is 203 (237)
T d1vhwa_ 183 AGIYGVAAEYGAKALAICTVS 203 (237)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEE
Confidence 578999999999999887543
No 15
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}
Probab=26.30 E-value=9.1 Score=20.31 Aligned_cols=18 Identities=11% Similarity=-0.271 Sum_probs=14.8
Q ss_pred HhhhhccCCCcEEEECcc
Q psy2576 4 LGSNLCSPVYQVIVLAPL 21 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~ 21 (80)
++.+|+..|+-|.|+++.
T Consensus 16 l~~Aa~~LG~~v~vldp~ 33 (78)
T d3etja2 16 LRQAGEPLGIAVWPVGLD 33 (78)
T ss_dssp HHHHHGGGTEEEEEECTT
T ss_pred HHHHHHHcCCEEEEEcCC
Confidence 455599999999999975
No 16
>d2ac7a1 c.56.2.1 (A:2-232) Purine nucleoside phosphorylase, PNP {Bacillus anthracis [TaxId: 1392]}
Probab=24.66 E-value=8.7 Score=23.61 Aligned_cols=21 Identities=5% Similarity=-0.089 Sum_probs=17.6
Q ss_pred chHhhhhccCCCcEEEECccC
Q psy2576 2 PCLGSNLCSPVYQVIVLAPLY 22 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~~~ 22 (80)
+++|.+|+.+++|+.++....
T Consensus 182 aaia~va~~~~v~~~~i~~is 202 (231)
T d2ac7a1 182 TALYTLAAKYGVNALSVLTVS 202 (231)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEEEE
Confidence 578999999999999887543
No 17
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=23.56 E-value=19 Score=19.86 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=18.1
Q ss_pred HhhhhccCCCcEEEECccCcccCcCC
Q psy2576 4 LGSNLCSPVYQVIVLAPLYKLSPQFL 29 (80)
Q Consensus 4 ~A~~Ak~~~vPv~V~a~~~K~~~~~~ 29 (80)
+|++|++.|+-|+|+.+.-. +|-..
T Consensus 26 la~aA~~lG~~v~v~d~~~~-~PA~~ 50 (111)
T d1kjqa2 26 VAIECQRLGVEVIAVDRYAD-APAMH 50 (111)
T ss_dssp HHHHHHTTTCEEEEEESSTT-CGGGG
T ss_pred HHHHHHHCCCEEEEEcCCCC-Cchhh
Confidence 45569999999999987543 55443
No 18
>g3bzy.1 d.367.1.1 (A:246-262,B:263-345) Type III secretion proteins EscU {Escherichia coli [TaxId: 562]}
Probab=21.94 E-value=12 Score=20.78 Aligned_cols=10 Identities=20% Similarity=-0.290 Sum_probs=8.7
Q ss_pred hhccCCCcEE
Q psy2576 7 NLCSPVYQVI 16 (80)
Q Consensus 7 ~Ak~~~vPv~ 16 (80)
.|+++|||++
T Consensus 52 ~A~e~gIPi~ 61 (100)
T g3bzy.1 52 LAELYDIPVI 61 (100)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHcCCCEE
Confidence 5889999998
No 19
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=21.60 E-value=14 Score=24.86 Aligned_cols=20 Identities=20% Similarity=0.044 Sum_probs=17.6
Q ss_pred chHhhhhccCCCcEEEECcc
Q psy2576 2 PCLGSNLCSPVYQVIVLAPL 21 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~~ 21 (80)
+++|.+|+.+|+|+.|+.+.
T Consensus 157 iAlA~~aa~lGik~~Iv~P~ 176 (382)
T d1wkva1 157 VALSAVARLYGYRARVYLPG 176 (382)
T ss_dssp HHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEEeec
Confidence 46899999999999999874
No 20
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.19 E-value=11 Score=17.20 Aligned_cols=13 Identities=23% Similarity=0.503 Sum_probs=9.8
Q ss_pred cEEEECccCcccCc
Q psy2576 14 QVIVLAPLYKLSPQ 27 (80)
Q Consensus 14 Pv~V~a~~~K~~~~ 27 (80)
||+ +|+-+||.|.
T Consensus 21 pvM-vAG~~K~HPE 33 (34)
T d1x6aa1 21 PFM-VAGEFKYHPE 33 (34)
T ss_dssp CCB-CCTTCCBCTT
T ss_pred cee-eecccccCCC
Confidence 555 6889999885
No 21
>d1ybfa_ c.56.2.1 (A:) AMP nucleosidase {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=20.61 E-value=19 Score=22.42 Aligned_cols=20 Identities=10% Similarity=-0.122 Sum_probs=17.0
Q ss_pred chHhhhhccCCCcEEEECcc
Q psy2576 2 PCLGSNLCSPVYQVIVLAPL 21 (80)
Q Consensus 2 ~~~A~~Ak~~~vPv~V~a~~ 21 (80)
+++|.+|+.+++|+..+.-.
T Consensus 185 Aala~va~~~gip~~~i~~V 204 (246)
T d1ybfa_ 185 ATLMTVGFANKIPMGALLLI 204 (246)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHhCCcEEEEEEE
Confidence 57889999999999988754
Done!