BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2579
(267 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+LQ +G+GNF+ VK+A H +L +A+KI+DK +L P + + L RE+
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARH-----VLTG--REVAVKIIDKTQLNPTSLQKLFREVR 66
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 122
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 123 ------------------------------------------IVSAVQYCHQKYIVHRDL 140
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 141 KAENLLLDGDMNIKIADFGFSNEF 164
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +AIKI+DK +L P + + L RE+
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--REVAIKIIDKTQLNPTSLQKLFREVR 66
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++L++EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---- 122
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 123 ------------------------------------------IVSAVQYCHQKRIVHRDL 140
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEF 164
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +AIKI+DK +L P + + L RE+
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--REVAIKIIDKTQLNPTSLQKLFREVR 63
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++L++EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---- 119
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 120 ------------------------------------------IVSAVQYCHQKRIVHRDL 137
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEF 161
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A+KI+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 121
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 122 ------------------------------------------IVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEF 163
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A+KI+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 121
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 122 ------------------------------------------IVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEF 163
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A+KI+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 121
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 122 ------------------------------------------IVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEF 163
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A++I+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 121
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 122 ------------------------------------------IVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEF 163
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A++I+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + GR+ E +A+ F Q
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---- 121
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 122 ------------------------------------------IVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEF 163
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A+KI+DK +L + + L RE+
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPNI++L+EV+ET ++LV+EYASGGE+++ + G + E +A+ F Q
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ---- 114
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
I+SAV++ H + I+HRD+
Sbjct: 115 ------------------------------------------IVSAVQYCHQKFIVHRDL 132
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 133 KAENLLLDADMNIKIADFGFSNEF 156
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 53/204 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
+ Y+L +G+GNF+ VK+A H IL +A+KI+DK +L + + L RE+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARH-----ILTG--KEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
+ ++HPNI++L +
Sbjct: 66 IXKVLNHPNIVKL----------------------------------------------F 79
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
EV+ET ++LV EYASGGE+++ + GR E +A+ F QI+SAV++ H + I+HRD+
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 242 KAENVFLSVRGIVKLGDLGFSTKL 265
KAEN+ L +K+ D GFS +
Sbjct: 140 KAENLLLDADXNIKIADFGFSNEF 163
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 54/200 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L +G G F+ VK+A H IL + +AIKI+DK L + + EI +++
Sbjct: 12 YELHETIGTGGFAKVKLACH-----ILTGEM--VAIKIMDKNTLGSDLPR-IKTEIEALK 63
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
++ H +I +L Y VL
Sbjct: 64 NLRHQHICQL----------------------------------------------YHVL 77
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
ET KIF+V+EY GGEL++ I ++ RLSE++ ++ F QI+SAV ++H + HRD+K E
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPE 137
Query: 245 NVFLSVRGIVKLGDLGFSTK 264
N+ +KL D G K
Sbjct: 138 NLLFDEYHKLKLIDFGLCAK 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 54/206 (26%)
Query: 61 RVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL-TPKARKMLSRE 119
++ Y L + LG G F VK+ HE+ +A+KIL++ K+ + + RE
Sbjct: 14 KIGHYILGDTLGVGTFGKVKVGKHELTG-------HKVAVKILNRQKIRSLDVVGKIRRE 66
Query: 120 IVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
I +++ HP+II+L
Sbjct: 67 IQNLKLFRHPHIIKL--------------------------------------------- 81
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
Y+V+ T IF+V+EY SGGEL++ I GRL E +++ F QILS V + H ++HR
Sbjct: 82 -YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 240 DIKAENVFLSVRGIVKLGDLGFSTKL 265
D+K ENV L K+ D G S +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 46/164 (28%)
Query: 100 IKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNK 159
IK ++ ++++ K R+ RE+ + ++ HPNI++ E E G +++V++Y GG+L+ +
Sbjct: 54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 160 ITTE-GRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK 218
I + G L ++D QIL +
Sbjct: 114 INAQKGVLFQED------QILDW------------------------------------- 130
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
F+QI A+KH+HDR I+HRDIK++N+FL+ G V+LGD G +
Sbjct: 131 --FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 54/207 (26%)
Query: 61 RVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL-TPKARKMLSRE 119
++ Y L + LG G F VK+ H++ +A+KIL++ K+ + + RE
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTG-------HKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 120 IVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
I +++ HP+II+L
Sbjct: 62 IQNLKLFRHPHIIKL--------------------------------------------- 76
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
Y+V+ T F+V+EY SGGEL++ I GR+ E +A+ F QILSAV + H ++HR
Sbjct: 77 -YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 240 DIKAENVFLSVRGIVKLGDLGFSTKLQ 266
D+K ENV L K+ D G S +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 54/207 (26%)
Query: 61 RVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL-TPKARKMLSRE 119
++ Y L + LG G F VK+ H++ +A+KIL++ K+ + + RE
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTG-------HKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 120 IVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
I +++ HP+II+L
Sbjct: 62 IQNLKLFRHPHIIKL--------------------------------------------- 76
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
Y+V+ T F+V+EY SGGEL++ I GR+ E +A+ F QILSAV + H ++HR
Sbjct: 77 -YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 240 DIKAENVFLSVRGIVKLGDLGFSTKLQ 266
D+K ENV L K+ D G S +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ELG+G FS V+ + + T A KI++ KL+ + + L RE
Sbjct: 33 YQLFEELGKGAFSVVRRCVKK-------TPTQEYAAKIINTKKLSARDHQKLEREARICR 85
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ +SE+
Sbjct: 86 LLKHPNIVRLHD----------------------------SISEE--------------- 102
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G +LV + +GGEL+ I SE DA QIL +V H+H DI+HRD+K E
Sbjct: 103 ---GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPE 159
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++Q
Sbjct: 160 NLLLASKCKGAAVKLADFGLAIEVQ 184
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ++G GNF ++ ++ ++ A+K +++ + + REI++
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELV-------AVKYIERGA---AIDENVQREIINHR 71
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV I T L+
Sbjct: 72 SLRHPNIVRFKEV----------------------ILTPTHLA----------------- 92
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+++EYASGGELY +I GR SED+A+ +F Q+LS V + H I HRD+K E
Sbjct: 93 -------IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLE 145
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ D G+S
Sbjct: 146 NTLLDGSPAPRLKICDFGYS 165
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA------KIYFLQIL--- 179
P IIR +FGK+ L Y + ++ K + L + D +I +L++L
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 180 ----LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRD 235
LY+V+ T I +V+EYA GGEL++ I + R++ED+ + +F QI+ A+++ H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 236 IIHRDIKAENVFLSVRGIVKLGDLGFST 263
I+HRD+K EN+ L VK+ D G S
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSN 156
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G GNF ++ + +A+K +++ + K + + REI++
Sbjct: 20 YELVKDIGSGNFGVARLMRDK-------QSNELVAVKYIERGE---KIDENVKREIINHR 69
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV+ T + +V+EYASGGEL+ +I GR SED+A+ +F Q
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ------- 122
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
++S V + H + HRD+K E
Sbjct: 123 ---------------------------------------LISGVSYCHAMQVCHRDLKLE 143
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ D G+S
Sbjct: 144 NTLLDGSPAPRLKICDFGYS 163
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
++ K F+ L+Y +T GK++L++EY SGGEL+ ++ EG ED A Y +I A+
Sbjct: 76 EEVKHPFIVDLIY-AFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
HLH + II+RD+K EN+ L+ +G VKL D G
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 55/206 (26%)
Query: 59 GKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLS 117
G + Y++ LG G+F VK+A H T +A+KI++K L + +
Sbjct: 10 GAHIGNYQIVKTLGEGSFGKVKLAYH-------TTTGQKVALKIINKKVLAKSDMQGRIE 62
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI + + HP+II+LY+V+++ +I +V+EYA G EL++ I ++SE +A+ +F Q
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I+SAV++ H I+
Sbjct: 122 ----------------------------------------------IISAVEYCHRHKIV 135
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFST 263
HRD+K EN+ L VK+ D G S
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSN 161
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
++ K F+ L+Y +T GK++L++EY SGGEL+ ++ EG ED A Y +I A+
Sbjct: 76 EEVKHPFIVDLIY-AFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
HLH + II+RD+K EN+ L+ +G VKL D G
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 55/206 (26%)
Query: 59 GKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLS 117
G + Y++ LG G+F VK+A H T +A+KI++K L + +
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLAYH-------TTTGQKVALKIINKKVLAKSDMQGRIE 56
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI + + HP+II+LY+V+++ +I +V+EYA G EL++ I ++SE +A+ +F Q
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I+SAV++ H I+
Sbjct: 116 ----------------------------------------------IISAVEYCHRHKIV 129
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFST 263
HRD+K EN+ L VK+ D G S
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSN 155
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 55/206 (26%)
Query: 59 GKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLS 117
G + Y++ LG G+F VK+A H T +A+KI++K L + +
Sbjct: 9 GAHIGNYQIVKTLGEGSFGKVKLAYH-------TTTGQKVALKIINKKVLAKSDMQGRIE 61
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI + + HP+II+LY+V+++ +I +V+EYA G EL++ I ++SE +A+ +F Q
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I+SAV++ H I+
Sbjct: 121 ----------------------------------------------IISAVEYCHRHKIV 134
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFST 263
HRD+K EN+ L VK+ D G S
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSN 160
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G GNF ++ + +A+K +++ + K + REI++
Sbjct: 21 YELVKDIGSGNFGVARLMRDK-------QSNELVAVKYIERGE---KIAANVKREIINHR 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV+ T + +V+EYASGGEL+ +I GR SED+A+ +F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ------- 123
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
++S V + H + HRD+K E
Sbjct: 124 ---------------------------------------LISGVSYCHAMQVCHRDLKLE 144
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ D G+S
Sbjct: 145 NTLLDGSPAPRLKICDFGYS 164
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G GNF ++ + +A+K +++ + K + + REI++
Sbjct: 21 YELVKDIGAGNFGVARLMRDK-------QANELVAVKYIERGE---KIDENVKREIINHR 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV+ T + +V+EYASGGEL+ +I GR SED+A+ +F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ------- 123
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
++S V + H + HRD+K E
Sbjct: 124 ---------------------------------------LISGVSYAHAMQVAHRDLKLE 144
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ D G+S
Sbjct: 145 NTLLDGSPAPRLKIADFGYS 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 20 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 77
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 78 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 137
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 138 NLMLDKDGHIKITDFGLC 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 74
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 75 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 135 NLMLDKDGHIKITDFGLC 152
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 74
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 75 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 135 NLMLDKDGHIKITDFGLC 152
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 74
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 75 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 135 NLMLDKDGHIKITDFGLC 152
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 74
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 75 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 135 NLMLDKDGHIKITDFGLC 152
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 14/137 (10%)
Query: 140 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAK------IYFLQIL-------LYEVLET 186
+FGK+ L +G ++ KI + L++ D + I +L++L LY+V+++
Sbjct: 16 SFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 75
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+I +V+EYA G EL++ I ++SE +A+ +F QI+SAV++ H I+HRD+K EN+
Sbjct: 76 KDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 134
Query: 247 FLSVRGIVKLGDLGFST 263
L VK+ D G S
Sbjct: 135 LLDEHLNVKIADFGLSN 151
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 74
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 75 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 135 NLMLDKDGHIKITDFGLC 152
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKI---------------TTEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ + FL L Y
Sbjct: 22 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY-AF 79
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T ++ V+EYA+GGEL+ ++ E +E+ A+ Y +I+SA+++LH RD+++RDIK E
Sbjct: 80 QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 139
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ L G +K+ D G
Sbjct: 140 NLMLDKDGHIKITDFGLC 157
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 55/210 (26%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK---ARKMLSREI 120
+Y+L +G+G FS V+ I+ A+KI+D AK T + + L RE
Sbjct: 25 VYELCEVIGKGAFSVVRRCINR-------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ HP+I+ L E + G +++V E+ G +L
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL------------------------ 113
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
F +V+ A G +Y SE A Y QIL A+++ HD +IIHRD
Sbjct: 114 ---------CFEIVKRADAGFVY---------SEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 241 IKAENVFLSVR---GIVKLGDLGFSTKLQQ 267
+K ENV L+ + VKLGD G + +L +
Sbjct: 156 VKPENVLLASKENSAPVKLGDFGVAIQLGE 185
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL---TPKARKMLSREIV 121
Y L+ +G+G++ V++AI I AIKI++K K+ PK + + E+
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIR-------AIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKIT-----TEGRLSEDDAKIYFL 176
M+ +HHPNI RLYEV E I LV+E GG L +K+ + G+ + D K
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
G I E + I+ R QI SA+ +LH++ I
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMR-----------QIFSALHYLHNQGI 189
Query: 237 IHRDIKAENVFLSVRGI--VKLGDLGFS 262
HRDIK EN S +KL D G S
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLS 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G GNF ++ + +A+K +++ + K + + REI++
Sbjct: 21 YELVKDIGSGNFGVARLMRDK-------QSNELVAVKYIERGE---KIDENVKREIINHR 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV+ T + +V+EYASGGEL+ +I GR SED+A+ +F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ------- 123
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
++S V + H + HRD+K E
Sbjct: 124 ---------------------------------------LISGVSYCHAMQVCHRDLKLE 144
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ G+S
Sbjct: 145 NTLLDGSPAPRLKICAFGYS 164
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 58/200 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G GNF ++ + +A+K +++ + K + + REI++
Sbjct: 21 YELVKDIGSGNFGVARLMRDK-------QSNELVAVKYIERGE---KIDENVKREIINHR 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ HPNI+R EV+ T + +V+EYASGGEL+ +I GR SED+A+ +F Q
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ------- 123
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
++S V + H + HRD+K E
Sbjct: 124 ---------------------------------------LISGVSYCHAMQVCHRDLKLE 144
Query: 245 NVFL--SVRGIVKLGDLGFS 262
N L S +K+ G+S
Sbjct: 145 NTLLDGSPAPRLKICAFGYS 164
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ELG+G FS V+ + +P Y A KI++ KL+ + + L RE
Sbjct: 6 YQLFEELGKGAFSVVRRCMK---IPTGQEY----AAKIINTKKLSARDHQKLEREARICR 58
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ +SE+
Sbjct: 59 LLKHPNIVRLHD----------------------------SISEE--------------- 75
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G +LV + +GGEL+ I SE DA QIL +V H H I+HRD+K E
Sbjct: 76 ---GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPE 132
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++Q
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ++G+G FS V+ + LCT Y A KI++ KL+ + + L RE
Sbjct: 6 YQLYEDIGKGAFSVVRRCVK------LCTGHEY-AAKIINTKKLSARDHQKLEREARICR 58
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ H NI+RL++ +SE+
Sbjct: 59 LLKHSNIVRLHD----------------------------SISEE--------------- 75
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G +LV + +GGEL+ I SE DA QIL AV H H ++HRD+K E
Sbjct: 76 ---GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 132
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++Q
Sbjct: 133 NLLLASKCKGAAVKLADFGLAIEVQ 157
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ELG+G FS V+ + +P Y A KI++ KL+ + + L RE
Sbjct: 6 YQLFEELGKGAFSVVRRCMK---IPTGQEY----AAKIINTKKLSARDHQKLEREARICR 58
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ +SE+
Sbjct: 59 LLKHPNIVRLHD----------------------------SISEE--------------- 75
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G +LV + +GGEL+ I SE DA QIL +V H H I+HRD+K E
Sbjct: 76 ---GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPE 132
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++Q
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 56/209 (26%)
Query: 62 VALYKLQNELGRGNFSTV-KMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI 120
+A ++++ ++GRG FS V + A VP+ + ++I D + KAR +EI
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPV-----ALKKVQIFDL--MDAKARADCIKEI 83
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ ++HPN+I+ Y ++ +V+E A G+ L
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGD------------------------L 119
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRL-SEDDAKIYFLQILSAVKHLHDRDIIHR 239
+++ F K + RL E YF+Q+ SA++H+H R ++HR
Sbjct: 120 SRMIKHFKK-------------------QKRLIPERTVWKYFVQLCSALEHMHSRRVMHR 160
Query: 240 DIKAENVFLSVRGIVKLGDLG----FSTK 264
DIK NVF++ G+VKLGDLG FS+K
Sbjct: 161 DIKPANVFITATGVVKLGDLGLGRFFSSK 189
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 129 PNIIRLYEVLE--TFGKIFLV--VEYASGGELY-----NKITTEGR------LSED---D 170
P+ L +VL +FGK+FLV V G LY K T + R + D D
Sbjct: 27 PSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD 86
Query: 171 AKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKH 230
F+ + L+ +T GK++L++++ GG+L+ +++ E +E+D K Y ++ + H
Sbjct: 87 VNHPFV-VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 231 LHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
LH II+RD+K EN+ L G +KL D G S
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 129 PNIIRLYEVLE--TFGKIFLV--VEYASGGELYN-KITTEGRLS-EDDAKIYFLQILLYE 182
P+ L +VL +FGK+FLV + + +LY K+ + L D + + +L E
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 183 V-----------LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHL 231
V +T GK++L++++ GG+L+ +++ E +E+D K Y ++ A+ HL
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 232 HDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
H II+RD+K EN+ L G +KL D G S
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 129 PNIIRLYEVLE--TFGKIFLV--VEYASGGELYN-KITTEGRLS-EDDAKIYFLQILLYE 182
P+ L +VL +FGK+FLV + + +LY K+ + L D + + +L E
Sbjct: 24 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 183 V-----------LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHL 231
V +T GK++L++++ GG+L+ +++ E +E+D K Y ++ A+ HL
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 232 HDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
H II+RD+K EN+ L G +KL D G S
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 129 PNIIRLYEVLE--TFGKIFLV--VEYASGGELYN-KITTEGRLS-EDDAKIYFLQILLYE 182
P+ L +VL +FGK+FLV + + +LY K+ + L D + + +L E
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 183 V-----------LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHL 231
V +T GK++L++++ GG+L+ +++ E +E+D K Y ++ A+ HL
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 232 HDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
H II+RD+K EN+ L G +KL D G S
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 56/207 (27%)
Query: 63 ALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVS 122
++Y+L ELG+G FS V+ V +L A KI++ KL+ + + L RE
Sbjct: 22 SMYQLFEELGKGAFSVVRRC-----VKVLAG--QEYAAKIINTKKLSARDHQKLEREARI 74
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+ HPNI+RL++ +SE+
Sbjct: 75 CRLLKHPNIVRLHD----------------------------SISEE------------- 93
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
G +L+ + +GGEL+ I SE DA QIL AV H H ++HRD+K
Sbjct: 94 -----GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 148
Query: 243 AENVFLSVR---GIVKLGDLGFSTKLQ 266
EN+ L+ + VKL D G + +++
Sbjct: 149 PENLLLASKLKGAAVKLADFGLAIEVE 175
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 23/163 (14%)
Query: 121 VSMESVHHPNIIRLYEVLE-----TFGKIFLVVEYASGGELYNKIT-------------- 161
VS+ H + +E L+ TFGK+ LV E A+G KI
Sbjct: 136 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 195
Query: 162 -TEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIY 220
TE R+ ++ ++ FL L Y +T ++ V+EYA+GGEL+ ++ E SED A+ Y
Sbjct: 196 LTENRVLQN-SRHPFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 221 FLQILSAVKHLH-DRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+I+SA+ +LH ++++++RD+K EN+ L G +K+ D G
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 66/209 (31%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK----ARKMLSREI 120
Y L+N +GRG++ VK+A+ + +I AK PK +EI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQK-------------GTRIRRAAKKIPKYFVEDVDRFKQEI 57
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
M+S+ HPNIIRLYE E I+LV+E +GGEL+ ++ + E DA
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA--------- 108
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
R+ +D +LSAV + H ++ HRD
Sbjct: 109 -----------------------------ARIMKD--------VLSAVAYCHKLNVAHRD 131
Query: 241 IKAEN-VFL--SVRGIVKLGDLGFSTKLQ 266
+K EN +FL S +KL D G + + +
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLAARFK 160
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 66/209 (31%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK----ARKMLSREI 120
Y L+N +GRG++ VK+A+ + +I AK PK +EI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQK-------------GTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
M+S+ HPNIIRLYE E I+LV+E +GGEL+ ++ + E DA
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA--------- 125
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
R+ +D +LSAV + H ++ HRD
Sbjct: 126 -----------------------------ARIMKD--------VLSAVAYCHKLNVAHRD 148
Query: 241 IKAEN-VFL--SVRGIVKLGDLGFSTKLQ 266
+K EN +FL S +KL D G + + +
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLAARFK 177
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 63/209 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCT---YISYLAIKILDKAKLTPKARK-MLSREI 120
YK Q LG+G+F V ILC A+K++ K ++ K K L RE+
Sbjct: 51 YKGQRVLGKGSFGEV----------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 100
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ + HPNI++LYE E G +LV E +GGEL+++I + R SE DA
Sbjct: 101 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA--------- 151
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
A+I Q+LS + ++H I+HRD
Sbjct: 152 ------------------------------------ARI-IRQVLSGITYMHKNKIVHRD 174
Query: 241 IKAENVFL---SVRGIVKLGDLGFSTKLQ 266
+K EN+ L S +++ D G ST +
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFE 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 23/163 (14%)
Query: 121 VSMESVHHPNIIRLYEVLE-----TFGKIFLVVEYASGGELYNKIT-------------- 161
VS+ H + +E L+ TFGK+ LV E A+G KI
Sbjct: 139 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 198
Query: 162 -TEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIY 220
TE R+ ++ ++ FL L Y +T ++ V+EYA+GGEL+ ++ E SED A+ Y
Sbjct: 199 LTENRVLQN-SRHPFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 221 FLQILSAVKHLH-DRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+I+SA+ +LH ++++++RD+K EN+ L G +K+ D G
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 63/209 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCT---YISYLAIKILDKAKLTPKARK-MLSREI 120
YK Q LG+G+F V ILC A+K++ K ++ K K L RE+
Sbjct: 52 YKGQRVLGKGSFGEV----------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 101
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ + HPNI++LYE E G +LV E +GGEL+++I + R SE DA
Sbjct: 102 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA--------- 152
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
A+I Q+LS + ++H I+HRD
Sbjct: 153 ------------------------------------ARI-IRQVLSGITYMHKNKIVHRD 175
Query: 241 IKAENVFL---SVRGIVKLGDLGFSTKLQ 266
+K EN+ L S +++ D G ST +
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFE 204
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 56/206 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y + LG+G+F V I T Y A+K+++KA K + RE+ ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRI------TQQEY-AVKVINKASAKNKDTSTILREVELLK 76
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI++L+ E+L
Sbjct: 77 KLDHPNIMKLF----------------------------------------------EIL 90
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E ++V E +GGEL+++I R SE DA Q+ S + ++H +I+HRD+K E
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQQ 267
N+ L + +K+ D G ST QQ
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 177 QQGYIKVADFGFAKRVK 193
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 56/206 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y + LG+G+F V I T Y A+K+++KA K + RE+ ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRI------TQQEY-AVKVINKASAKNKDTSTILREVELLK 76
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI++L+ E+L
Sbjct: 77 KLDHPNIMKLF----------------------------------------------EIL 90
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E ++V E +GGEL+++I R SE DA Q+ S + ++H +I+HRD+K E
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQQ 267
N+ L + +K+ D G ST QQ
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 56/206 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y + LG+G+F V I T Y A+K+++KA K + RE+ ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRI------TQQEY-AVKVINKASAKNKDTSTILREVELLK 76
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI++L+ E+L
Sbjct: 77 KLDHPNIMKLF----------------------------------------------EIL 90
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E ++V E +GGEL+++I R SE DA Q+ S + ++H +I+HRD+K E
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQQ 267
N+ L + +K+ D G ST QQ
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKIT---------------TEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ ++ FL L Y
Sbjct: 21 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYS-F 78
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLH-DRDIIHRDIKA 243
+T ++ V+EYA+GGEL+ ++ E SED A+ Y +I+SA+ +LH ++++++RD+K
Sbjct: 79 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 138
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G
Sbjct: 139 ENLMLDKDGHIKITDFGLC 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKIT---------------TEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ ++ FL L Y
Sbjct: 22 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYS-F 79
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLH-DRDIIHRDIKA 243
+T ++ V+EYA+GGEL+ ++ E SED A+ Y +I+SA+ +LH ++++++RD+K
Sbjct: 80 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G
Sbjct: 140 ENLMLDKDGHIKITDFGLC 158
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 140 TFGKIFLVVEYASGGELYNKIT---------------TEGRLSEDDAKIYFLQILLYEVL 184
TFGK+ LV E A+G KI TE R+ ++ ++ FL L Y
Sbjct: 20 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYS-F 77
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLH-DRDIIHRDIKA 243
+T ++ V+EYA+GGEL+ ++ E SED A+ Y +I+SA+ +LH ++++++RD+K
Sbjct: 78 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 137
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G
Sbjct: 138 ENLMLDKDGHIKITDFGLC 156
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 56/201 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ++ ELG+G FS V+ +H+ T + + A KI++ KL+ + + L RE
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKT------TGLEF-AAKIINTKKLSARDFQKLEREARICR 83
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ ++
Sbjct: 84 KLQHPNIVRLHDSIQE-------------------------------------------- 99
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E+F +LV + +GGEL+ I SE DA QIL ++ + H I+HR++K E
Sbjct: 100 ESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPE 157
Query: 245 NVFLSVR---GIVKLGDLGFS 262
N+ L+ + VKL D G +
Sbjct: 158 NLLLASKAKGAAVKLADFGLA 178
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 57/202 (28%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSM 123
+Y ++ LG G FS V +A + ++ AIK + K L K M EI +
Sbjct: 19 IYDFRDVLGTGAFSEVILAEDKRTQKLV-------AIKCIAKEALEGKEGSM-ENEIAVL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+ L ++ Y SGG LY
Sbjct: 71 HKIKHPNIVALDDI------------YESGGHLY-------------------------- 92
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
L+++ SGGEL+++I +G +E DA Q+L AVK+LHD I+HRD+K
Sbjct: 93 --------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 244 ENVF---LSVRGIVKLGDLGFS 262
EN+ L + + D G S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLS 166
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+ + LG+G F V +A + I+ A+K+L K++L + L REI
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIM-------ALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+R+Y D K
Sbjct: 69 SHLRHPNILRMYNYFH------------------------------DRK----------- 87
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+I+L++E+A GELY ++ GR E + + ++ A+ + H+R +IHRDIK
Sbjct: 88 -----RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ + +G +K+ D G+S
Sbjct: 143 ENLLMGYKGELKIADFGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+ + LG+G F V +A + I+ A+K+L K++L + L REI
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIM-------ALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+R+Y D K
Sbjct: 70 SHLRHPNILRMYNYFH------------------------------DRK----------- 88
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+I+L++E+A GELY ++ GR E + + ++ A+ + H+R +IHRDIK
Sbjct: 89 -----RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 143
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ + +G +K+ D G+S
Sbjct: 144 ENLLMGYKGELKIADFGWS 162
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 177 QQGYIKVTDFGFAKRVK 193
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 177 QQGYIKVTDFGFAKRVK 193
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 176 QQGYIKVTDFGFAKRVK 192
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 57/202 (28%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSM 123
+Y ++ LG G FS V +A + ++ AIK + K L K M EI +
Sbjct: 19 IYDFRDVLGTGAFSEVILAEDKRTQKLV-------AIKCIAKEALEGKEGSM-ENEIAVL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+ L ++ Y SGG LY
Sbjct: 71 HKIKHPNIVALDDI------------YESGGHLY-------------------------- 92
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
L+++ SGGEL+++I +G +E DA Q+L AVK+LHD I+HRD+K
Sbjct: 93 --------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 244 ENVF---LSVRGIVKLGDLGFS 262
EN+ L + + D G S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLS 166
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 177 QQGYIKVTDFGFAKRVK 193
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 57/202 (28%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSM 123
+Y ++ LG G FS V +A + ++ AIK + K L K M EI +
Sbjct: 19 IYDFRDVLGTGAFSEVILAEDKRTQKLV-------AIKCIAKEALEGKEGSM-ENEIAVL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+ L ++ Y SGG LY
Sbjct: 71 HKIKHPNIVALDDI------------YESGGHLY-------------------------- 92
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
L+++ SGGEL+++I +G +E DA Q+L AVK+LHD I+HRD+K
Sbjct: 93 --------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 244 ENVF---LSVRGIVKLGDLGFS 262
EN+ L + + D G S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLS 166
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 150 QEEDCLIKITDFGHS 164
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 89 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 148
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 149 QEEDCLIKITDFGHS 163
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 150 QEEDCLIKITDFGHS 164
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 150 QEEDCLIKITDFGHS 164
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 54/193 (27%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSMESVHHP 129
LG+G F V +A + I+ A+K+L K++L + L REI + HP
Sbjct: 22 LGKGKFGNVYLAREKQNKFIM-------ALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
NI+R+Y D K +
Sbjct: 75 NILRMYNYFH------------------------------DRK----------------R 88
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
I+L++E+A GELY ++ GR E + + ++ A+ + H+R +IHRDIK EN+ +
Sbjct: 89 IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 148
Query: 250 VRGIVKLGDLGFS 262
+G +K+ D G+S
Sbjct: 149 YKGELKIADFGWS 161
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 96 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 155
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 156 QEEDCLIKITDFGHS 170
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 65/221 (29%)
Query: 53 QHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCT---YISYLAIKILDKAKLT 109
QH T++ YK Q LG+G+F V ILC A+K++ K ++
Sbjct: 24 QHSTAIFS--DRYKGQRVLGKGSFGEV----------ILCKDKITGQECAVKVISKRQVK 71
Query: 110 PKARK-MLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
K K L RE+ ++ + HPNI++
Sbjct: 72 QKTDKESLLREVQLLKQLDHPNIMK----------------------------------- 96
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
LYE E G +LV E +GGEL+++I + R SE DA Q+LS +
Sbjct: 97 -----------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 229 KHLHDRDIIHRDIKAENVFL---SVRGIVKLGDLGFSTKLQ 266
++H I+HRD+K EN+ L S +++ D G ST +
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 65/221 (29%)
Query: 53 QHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCT---YISYLAIKILDKAKLT 109
QH T++ YK Q LG+G+F V ILC A+K++ K ++
Sbjct: 18 QHSTAIFSD--RYKGQRVLGKGSFGEV----------ILCKDKITGQECAVKVISKRQVK 65
Query: 110 PKARK-MLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
K K L RE+ ++ + HPNI++
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIMK----------------------------------- 90
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
LYE E G +LV E +GGEL+++I + R SE DA Q+LS +
Sbjct: 91 -----------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 229 KHLHDRDIIHRDIKAENVFL---SVRGIVKLGDLGFSTKLQ 266
++H I+HRD+K EN+ L S +++ D G ST +
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 229 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 288
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 289 QEEDCLIKITDFGHS 303
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+E GGEL++K+ RL E K+YF Q+L AV++LH+ IIHRD+K ENV LS
Sbjct: 215 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 274
Query: 251 R---GIVKLGDLGFS 262
+ ++K+ D G S
Sbjct: 275 QEEDCLIKITDFGHS 289
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 63/209 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCT---YISYLAIKILDKAKLTPKARK-MLSREI 120
YK Q LG+G+F V ILC A+K++ K ++ K K L RE+
Sbjct: 28 YKGQRVLGKGSFGEV----------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ + HPNI +LYE E G +LV E +GGEL+++I + R SE DA
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA--------- 128
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
A+I Q+LS + + H I+HRD
Sbjct: 129 ------------------------------------ARI-IRQVLSGITYXHKNKIVHRD 151
Query: 241 IKAENVFL---SVRGIVKLGDLGFSTKLQ 266
+K EN+ L S +++ D G ST +
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFE 180
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 176 QQGYIKVADFGFAKRVK 192
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 79 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 139 RDNLKISDFGLAT 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 141 RDNLKISDFGLAT 153
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L +EY SGGEL+++I + + E DA+ +F Q+++ V +LH I HRDIK EN+ L
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 251 RGIVKLGDLGFST 263
R +K+ D G +T
Sbjct: 140 RDNLKISDFGLAT 152
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 57/202 (28%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSM 123
+Y ++ LG G FS V +A + ++ AIK + K L K M EI +
Sbjct: 19 IYDFRDVLGTGAFSEVILAEDKRTQKLV-------AIKCIAKKALEGKEGSM-ENEIAVL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+ L ++ Y SGG L
Sbjct: 71 HKIKHPNIVALDDI------------YESGGHL--------------------------- 91
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+L+++ SGGEL+++I +G +E DA Q+L AVK+LHD I+HRD+K
Sbjct: 92 -------YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 244 ENVF---LSVRGIVKLGDLGFS 262
EN+ L + + D G S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLS 166
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 54/218 (24%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
KKW++ + ++ LG G+F V + H+ ++ A+KILDK K
Sbjct: 28 KKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK-------ETGNHFAMKILDKQK-- 78
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLV-VEYASGGELYNKITTEGRLSE 168
+V ++ + H + +L+ FLV +EY+ +
Sbjct: 79 ----------VVKLKQIEH--TLNEKRILQAVNFPFLVKLEYSF---------------K 111
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
D++ +Y +V+EY GGE+++ + GR SE A+ Y QI+
Sbjct: 112 DNSNLY-----------------MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++LH D+I+RD+K EN+ + +G +++ D GF+ +++
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 54/218 (24%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
KKW++ + ++ LG G+F V + H+ ++ A+KILDK K
Sbjct: 28 KKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK-------ETGNHFAMKILDKQK-- 78
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLV-VEYASGGELYNKITTEGRLSE 168
+V ++ + H + +L+ FLV +EY+ +
Sbjct: 79 ----------VVKLKQIEH--TLNEKRILQAVNFPFLVKLEYSF---------------K 111
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
D++ +Y +V+EY GGE+++ + GR SE A+ Y QI+
Sbjct: 112 DNSNLY-----------------MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++LH D+I+RD+K EN+ + +G +++ D GF+ +++
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 54/218 (24%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
KKW++ + ++ LG G+F V + H+ ++ A+KILDK K
Sbjct: 28 KKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK-------ETGNHFAMKILDKQK-- 78
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLV-VEYASGGELYNKITTEGRLSE 168
+V ++ + H + +L+ FLV +EY+ +
Sbjct: 79 ----------VVKLKQIEH--TLNEKRILQAVNFPFLVKLEYSF---------------K 111
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
D++ +Y +V+EY GGE+++ + GR SE A+ Y QI+
Sbjct: 112 DNSNLY-----------------MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++LH D+I+RD+K EN+ + +G +++ D GF+ +++
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 177 QQGYIKVTDFGFAKRVK 193
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 176 QQGYIKVTDFGFAKRVK 192
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D G + +++
Sbjct: 176 QQGYIKVTDFGLAKRVK 192
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG++++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 176 QQGYIKVADFGFAKRVK 192
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L E+ ET +I LV+E +GGEL+++I +G SE DA QIL AV +LH+ I+
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 238 HRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + +K+ D G S
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLS 198
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG++++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +K+ D GF+ +++
Sbjct: 176 QQGYIKVADFGFAKRVK 192
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 197 QQGYIQVTDFGFAKRVK 213
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 55/210 (26%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK---ARKMLSREI 120
+Y+L +G+G FS V+ I+ A+KI+D AK T + + L RE
Sbjct: 25 VYELCEVIGKGPFSVVRRCINR-------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ HP+I+ L E + G +++V E+ G +L
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL------------------------ 113
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
F +V+ A G +Y SE A Y QIL A+++ HD +IIHRD
Sbjct: 114 ---------CFEIVKRADAGFVY---------SEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 241 IKAENVFLSVR---GIVKLGDLGFSTKLQQ 267
+K V L+ + VKLG G + +L +
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQLGE 185
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 103 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 163 EQGYIQVTDFGFAKRVK 179
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 55/210 (26%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK---ARKMLSREI 120
+Y+L +G+G FS V+ I+ A+KI+D AK T + + L RE
Sbjct: 27 VYELCEVIGKGPFSVVRRCINR-------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 79
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ HP+I+ L E + G +++V E+ G +L
Sbjct: 80 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL------------------------ 115
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
F +V+ A G +Y SE A Y QIL A+++ HD +IIHRD
Sbjct: 116 ---------CFEIVKRADAGFVY---------SEAVASHYMRQILEALRYCHDNNIIHRD 157
Query: 241 IKAENVFLSVR---GIVKLGDLGFSTKLQQ 267
+K V L+ + VKLG G + +L +
Sbjct: 158 VKPHCVLLASKENSAPVKLGGFGVAIQLGE 187
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 162 QQGYIQVTDFGFAKRVK 178
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 169 QQGYIQVTDFGFAKRVK 185
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I ++ + +IF++++Y GGEL++ + R AK Y ++ A+++LH +DII
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDII 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
+RD+K EN+ L G +K+ D GF+
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFA 153
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 197 QQGYIQVTDFGFAKRVK 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 68 SHLRHPNILRLYGYFH------------------------------DAT----------- 86
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA GE+Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 87 -----RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 142 ENLLLGSAGELKIADFGWS 160
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ++ ELG+G FS V+ +H+ T A KI++ KL+ + + L RE
Sbjct: 7 YDVKEELGKGAFSVVRRCVHK-------TTGLEFAAKIINTKKLSARDFQKLEREARICR 59
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ ++ +LV + +GGEL+ I SE DA QI
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------ 113
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
L ++ + H I+HR++K E
Sbjct: 114 ----------------------------------------LESIAYCHSNGIVHRNLKPE 133
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++
Sbjct: 134 NLLLASKAKGAAVKLADFGLAIEVN 158
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY G ++
Sbjct: 68 SHLRHPNILRLY------------------GYFHDAT----------------------- 86
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA GE+Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 87 -----RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 142 ENLLLGSAGELKIADFGWS 160
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ++ ELG+G FS V+ +H+ T A KI++ KL+ + + L RE
Sbjct: 8 YDVKEELGKGAFSVVRRCVHK-------TTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ ++ +LV + +GGEL+ I SE DA QI
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------ 114
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
L ++ + H I+HR++K E
Sbjct: 115 ----------------------------------------LESIAYCHSNGIVHRNLKPE 134
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVN 159
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ++ ELG+G FS V+ +H+ T A KI++ KL+ + + L RE
Sbjct: 8 YDVKEELGKGAFSVVRRCVHK-------TTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ ++ +LV + +GGEL+ I SE DA QI
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------ 114
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
L ++ + H I+HR++K E
Sbjct: 115 ----------------------------------------LESIAYCHSNGIVHRNLKPE 134
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + ++
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVN 159
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 56/205 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L ELG+G FS V+ V +L Y A+ I++ KL+ + + L RE
Sbjct: 13 YQLFEELGKGAFSVVRRC-----VKVLAGQ-EYAAM-IINTKKLSARDHQKLEREARICR 65
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
+ HPNI+RL++ +SE+
Sbjct: 66 LLKHPNIVRLHD----------------------------SISEE--------------- 82
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G +L+ + +GGEL+ I SE DA QIL AV H H ++HR++K E
Sbjct: 83 ---GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPE 139
Query: 245 NVFLSVR---GIVKLGDLGFSTKLQ 266
N+ L+ + VKL D G + +++
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVE 164
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EYA GGE+++ + GR SE A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D G + +++
Sbjct: 176 QQGYIQVTDFGLAKRVK 192
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 53/77 (68%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR +E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 149 EYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITT 208
E + E + + TE + E + FL + L+ +T ++F V+EY +GG+L +
Sbjct: 56 ELVNDDEDIDWVQTEKHVFEQASNHPFL-VGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 114
Query: 209 EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+ +L E+ A+ Y +I A+ +LH+R II+RD+K +NV L G +KL D G
Sbjct: 115 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 166
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 149 EYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITT 208
E + E + + TE + E + FL + L+ +T ++F V+EY +GG+L +
Sbjct: 41 ELVNDDEDIDWVQTEKHVFEQASNHPFL-VGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 99
Query: 209 EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+ +L E+ A+ Y +I A+ +LH+R II+RD+K +NV L G +KL D G
Sbjct: 100 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 151
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 149 EYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITT 208
E + E + + TE + E + FL + L+ +T ++F V+EY +GG+L +
Sbjct: 45 ELVNDDEDIDWVQTEKHVFEQASNHPFL-VGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 103
Query: 209 EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+ +L E+ A+ Y +I A+ +LH+R II+RD+K +NV L G +KL D G
Sbjct: 104 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 155
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 149 EYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITT 208
E + E + + TE + E + FL + L+ +T ++F V+EY +GG+L +
Sbjct: 88 ELVNDDEDIDWVQTEKHVFEQASNHPFL-VGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 146
Query: 209 EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+ +L E+ A+ Y +I A+ +LH+R II+RD+K +NV L G +KL D G
Sbjct: 147 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 198
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ L+ +T K+ L+++Y +GGEL+ ++ R +E + +IY +I+ A++HLH II
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGII 181
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
+RDIK EN+ L G V L D G S
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 170
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 171 QQGYIQVTDFGFAKRVK 187
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 197 QQGYIQVTDFGFAKRVK 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY +GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 169 QQGYIQVTDFGFAKRVK 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+ +T ++F V+E+ +GG+L I R E A+ Y +I+SA+ LHD+ II+R
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYR 148
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K +NV L G KL D G
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMC 171
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 177 QQGYIQVTDFGFAKRVK 193
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GGE+++ + GR E A+ Y QI+ ++LH D+I+RD+K EN+ +
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
+G +++ D GF+ +++
Sbjct: 176 QQGYIQVTDFGFAKRVK 192
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 78/236 (33%)
Query: 57 SLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR- 113
S G V L Y L++E+G+G++ VK+A +E +Y A+K+L K KL +A
Sbjct: 5 SSGDCVQLNQYTLKDEIGKGSYGVVKLAYNE-------NDNTYYAMKVLSKKKLIRQAGF 57
Query: 114 -----------------------KMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEY 150
+ + +EI ++ + HPN+++L EVL+
Sbjct: 58 PRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDD---------- 107
Query: 151 ASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEG 210
+ED +++V E + G + ++ T
Sbjct: 108 ---------------PNED-------------------HLYMVFELVNQGPVM-EVPTLK 132
Query: 211 RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
LSED A+ YF ++ +++LH + IIHRDIK N+ + G +K+ D G S + +
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 56/215 (26%)
Query: 51 KWQHETSLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
K ++E S ++ AL +++ LG+G F V +A + +I LA+K+L KA+L
Sbjct: 11 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQL 63
Query: 109 TPKA-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 167
L RE+ + HPNI+RLY G ++
Sbjct: 64 EKAGVEHQLRREVEIQSHLRHPNILRLY------------------GYFHDAT------- 98
Query: 168 EDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSA 227
+++L++EYA G +Y ++ + E Y ++ +A
Sbjct: 99 ---------------------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 228 VKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ + H + +IHRDIK EN+ L G +K+ D G+S
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 56/215 (26%)
Query: 51 KWQHETSLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
K ++E S ++ AL +++ LG+G F V +A + +I LA+K+L KA+L
Sbjct: 20 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQL 72
Query: 109 TPKA-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 167
L RE+ + HPNI+RLY
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYG------------------------------- 101
Query: 168 EDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSA 227
YF +++L++EYA G +Y ++ + E Y ++ +A
Sbjct: 102 ------YFHDAT---------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 228 VKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ + H + +IHRDIK EN+ L G +K+ D G+S
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 56/215 (26%)
Query: 51 KWQHETSLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
K ++E S ++ AL +++ LG+G F V +A + +I LA+K+L KA+L
Sbjct: 20 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQL 72
Query: 109 TPKA-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 167
L RE+ + HPNI+RLY
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYG------------------------------- 101
Query: 168 EDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSA 227
YF +++L++EYA G +Y ++ + E Y ++ +A
Sbjct: 102 ------YFHDAT---------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 228 VKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ + H + +IHRDIK EN+ L G +K+ D G+S
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 56/212 (26%)
Query: 54 HETSLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
H S ++ AL +++ LG+G F V +A + IL A+K+L KA+L
Sbjct: 2 HXESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-------ALKVLFKAQLEKA 54
Query: 112 A-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDD 170
L RE+ + HPNI+RLY D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFH------------------------------D 84
Query: 171 AKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKH 230
A +++L++EYA G +Y ++ + E Y ++ +A+ +
Sbjct: 85 AT----------------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 231 LHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
H + +IHRDIK EN+ L G +K+ D G+S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 54/200 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 64 SHLRHPNILRLYGYFH------------------------------DAT----------- 82
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 83 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 244 ENVFLSVRGIVKLGDLGFST 263
EN+ L G +K+ D G+S
Sbjct: 138 ENLLLGSAGELKIADFGWSC 157
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 56/208 (26%)
Query: 59 GKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSR 118
G +Y+ +LG G + V + ++ T++ AIKI+ K ++ + L
Sbjct: 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKV------THVER-AIKIIRKTSVSTSSNSKLLE 85
Query: 119 EIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 178
E+ ++ + HPNI++LY+ +D + Y+L
Sbjct: 86 EVAVLKLLDHPNIMKLYDFF------------------------------EDKRNYYL-- 113
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
V+E GGEL+++I + +E DA + Q+LS V +LH +I+H
Sbjct: 114 --------------VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 239 RDIKAENVFLSVR---GIVKLGDLGFST 263
RD+K EN+ L + ++K+ D G S
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSA 187
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 140 ENLLLGSAGELKIADFGWS 158
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 140 ENLLLGSAGELKIADFGWS 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 65 SHLRHPNILRLYGYFH------------------------------DAT----------- 83
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 84 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 139 ENLLLGSAGELKIADFGWS 157
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKN-----SKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY G ++
Sbjct: 63 SHLRHPNILRLY------------------GYFHDST----------------------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
LYE E +LV+E GGEL+++I + SE DA + Q+LS +LH +I+HR
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 240 DIKAENVFL---SVRGIVKLGDLGFSTKLQ 266
D+K EN+ L S ++K+ D G S +
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFE 175
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ L ++ E+ +LV++ SGGEL+++I G +E DA + Q+LSAVK+LH+ I+
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV 128
Query: 238 HRDIKAEN-VFLSVR--GIVKLGDLGFSTKLQQ 267
HRD+K EN ++L+ + + D G S K++Q
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLS-KMEQ 160
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 14 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 67 SHLRHPNILRLYGYFH------------------------------DAT----------- 85
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 86 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 141 ENLLLGSAGELKIADFGWS 159
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 9 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 62 SHLRHPNILRLYGYFH------------------------------DAT----------- 80
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 81 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 135
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 136 ENLLLGSAGELKIADFGWS 154
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + IL A+K+L KA+L L RE+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFIL-------ALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 68 SHLRHPNILRLYGYFH------------------------------DAT----------- 86
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 87 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 142 ENLLLGSAGELKIADFGWS 160
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 126 VHHPNIIRLYEVLE-----TFGKIFLVVEYASGGELYNKITTEGRLSEDDA---KIYFLQ 177
+ H +++ Y++ E FG + V E A+G K S+ + +I +
Sbjct: 44 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMS 103
Query: 178 IL-------LYEVLETFGKIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFLQILSAVK 229
+L L++ E ++ ++ E+ SGGEL+ K+ E ++SED+A Y Q+ +
Sbjct: 104 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 230 HLHDRDIIHRDIKAENVFLSVR--GIVKLGDLGFSTKLQ 266
H+H+ + +H D+K EN+ + + +KL D G + L
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 64 SHLRHPNILRLYGYFH------------------------------DAT----------- 82
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 83 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 138 ENLLLGSAGELKIADFGWS 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 64 SHLRHPNILRLYGYFH------------------------------DAT----------- 82
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 83 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 138 ENLLLGSAGELKIADFGWS 156
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 140 ENLLLGSAGELKIADFGWS 158
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY G ++
Sbjct: 63 SHLRHPNILRLY------------------GYFHDAT----------------------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + IL A+K+L KA+L L RE+
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFIL-------ALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 60 SHLRHPNILRLYGYFH------------------------------DAT----------- 78
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 79 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 133
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 134 ENLLLGSAGELKIADFGWS 152
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 140 ENLLLGSAGELKIADFGWS 158
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 63 SHLRHPNILRLYGYFH------------------------------DAT----------- 81
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 82 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 137 ENLLLGSAGELKIADFGWS 155
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 140 ENLLLGSAGELKIADFGWS 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 60 KRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSR 118
KR +K LG G+FSTV +A L T Y AIKIL+K + + + ++R
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTR 57
Query: 119 EIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 178
E M + HP ++LY + DD K+YF
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQ-----------------------------DDEKLYF--- 85
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
+ YA GEL I G E + Y +I+SA+++LH + IIH
Sbjct: 86 --------------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 131
Query: 239 RDIKAENVFLSVRGIVKLGDLG 260
RD+K EN+ L+ +++ D G
Sbjct: 132 RDLKPENILLNEDMHIQITDFG 153
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 60 KRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSR 118
KR +K LG G+FSTV +A L T Y AIKIL+K + + + ++R
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTR 59
Query: 119 EIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 178
E M + HP ++LY + DD K+YF
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQ-----------------------------DDEKLYF--- 87
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
+ YA GEL I G E + Y +I+SA+++LH + IIH
Sbjct: 88 --------------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 133
Query: 239 RDIKAENVFLSVRGIVKLGDLG 260
RD+K EN+ L+ +++ D G
Sbjct: 134 RDLKPENILLNEDMHIQITDFG 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 68 SHLRHPNILRLYGYFH------------------------------DAT----------- 86
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 87 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 142 ENLLLGSAGELKIADFGWS 160
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 60 KRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSR 118
KR +K LG G+FSTV +A L T Y AIKIL+K + + + ++R
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTR 58
Query: 119 EIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 178
E M + HP ++LY + DD K+YF
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQ-----------------------------DDEKLYF--- 86
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
+ YA GEL I G E + Y +I+SA+++LH + IIH
Sbjct: 87 --------------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 132
Query: 239 RDIKAENVFLSVRGIVKLGDLG 260
RD+K EN+ L+ +++ D G
Sbjct: 133 RDLKPENILLNEDMHIQITDFG 154
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 60 KRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSR 118
KR +K LG G+FSTV +A L T Y AIKIL+K + + + ++R
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTR 56
Query: 119 EIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 178
E M + HP ++LY + DD K+YF
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQ-----------------------------DDEKLYF--- 84
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
+ YA GEL I G E + Y +I+SA+++LH + IIH
Sbjct: 85 --------------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 130
Query: 239 RDIKAENVFLSVRGIVKLGDLG 260
RD+K EN+ L+ +++ D G
Sbjct: 131 RDLKPENILLNEDMHIQITDFG 152
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 126 VHHPNIIRLYEVLE-----TFGKIFLVVEYASGGELYNKITTEGRLSEDDA---KIYFLQ 177
+ H +++ Y++ E FG + V E A+G K S+ + +I +
Sbjct: 150 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMS 209
Query: 178 IL-------LYEVLETFGKIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFLQILSAVK 229
+L L++ E ++ ++ E+ SGGEL+ K+ E ++SED+A Y Q+ +
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 230 HLHDRDIIHRDIKAENVFLSVR--GIVKLGDLGFSTKLQ 266
H+H+ + +H D+K EN+ + + +KL D G + L
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+ + LG+G F V +A +I LA+K+L K +L L RE+
Sbjct: 14 FDIGRPLGKGKFGNVYLARER-----QSKFI--LALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 67 SHLRHPNILRLYGYFH------------------------------DAT----------- 85
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ R E Y ++ +A+ + H + +IHRDIK
Sbjct: 86 -----RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 141 ENLLLGSNGELKIADFGWS 159
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+ + LG+G F V +A +I LA+K+L K +L L RE+
Sbjct: 14 FDIGRPLGKGKFGNVYLARER-----QSKFI--LALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 67 SHLRHPNILRLYGYFH------------------------------DAT----------- 85
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ R E Y ++ +A+ + H + +IHRDIK
Sbjct: 86 -----RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ D G+S
Sbjct: 141 ENLLLGSNGELKIADFGWS 159
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 178 ILLYEVLETFGKIFLVVEYA-SGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
I L + ET LV+E +L++ IT +G L E ++ +F Q+++A++H H R +
Sbjct: 101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGV 160
Query: 237 IHRDIKAENVFLSV-RGIVKLGDLG 260
+HRDIK EN+ + + RG KL D G
Sbjct: 161 VHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
LYE E +LV+E GGEL+++I + SE DA + Q+LS +LH +I+HR
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 240 DIKAENVFL---SVRGIVKLGDLGFSTKLQ 266
D+K EN+ L S ++K+ D G S +
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFE 158
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 155 ELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 214
E+YN+I+ L + I L++V E +LV E+ GGEL+ +I + E
Sbjct: 92 EIYNEISLLKSLDHPNI------IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGI---VKLGDLGFST 263
DA QILS + +LH +I+HRDIK EN+ L + +K+ D G S+
Sbjct: 146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 82/208 (39%), Gaps = 62/208 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTP-----KARKMLSRE 119
YK+ ++LG G STV +A I L IK+ KA P + K RE
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTI-----------LNIKVAIKAIFIPPREKEETLKRFERE 61
Query: 120 IVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ + + H NI+ + +V E EDD
Sbjct: 62 VHNSSQLSHQNIVSMIDVDE----------------------------EDDC-------- 85
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
+LV+EY G L I + G LS D A + QIL +KH HD I+HR
Sbjct: 86 ----------YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHR 135
Query: 240 DIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
DIK +N+ + +K+ D G + L +
Sbjct: 136 DIKPQNILIDSNKTLKIFDFGIAKALSE 163
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 54/212 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
++++ LG G F V IH+ +AIK + +L+PK R+ EI
Sbjct: 13 CGPWEMKERLGTGGFGYVLRWIHQ-------DTGEQVAIKQC-RQELSPKNRERWCLEIQ 64
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPN++ EV + K L+ +D +
Sbjct: 65 IMKKLNHPNVVSAREVPDGLQK----------------------LAPNDLPL-------- 94
Query: 182 EVLETFGKIFLVVEYASGGEL---YNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
L +EY GG+L N+ L E + I SA+++LH+ IIH
Sbjct: 95 ----------LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 144
Query: 239 RDIKAENVFLSV---RGIVKLGDLGFSTKLQQ 267
RD+K EN+ L R I K+ DLG++ +L Q
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDI 236
I L++ E ++ L++E+ SGGEL+++I E ++SE + Y Q +KH+H+ I
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170
Query: 237 IHRDIKAENVFLSVR--GIVKLGDLGFSTKLQ 266
+H DIK EN+ + VK+ D G +TKL
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 54/212 (25%)
Query: 62 VALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIV 121
++++ LG G F V IH+ +AIK + +L+PK R+ EI
Sbjct: 14 CGPWEMKERLGTGGFGYVLRWIHQ-------DTGEQVAIKQC-RQELSPKNRERWCLEIQ 65
Query: 122 SMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLY 181
M+ ++HPN++ EV + K L+ +D +
Sbjct: 66 IMKKLNHPNVVSAREVPDGLQK----------------------LAPNDLPL-------- 95
Query: 182 EVLETFGKIFLVVEYASGGEL---YNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
L +EY GG+L N+ L E + I SA+++LH+ IIH
Sbjct: 96 ----------LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 145
Query: 239 RDIKAENVFLSV---RGIVKLGDLGFSTKLQQ 267
RD+K EN+ L R I K+ DLG++ +L Q
Sbjct: 146 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 66 SHLRHPNILRLYGYFH------------------------------DAT----------- 84
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 85 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ + G+S
Sbjct: 140 ENLLLGSAGELKIANFGWS 158
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I LA+K+L KA+L L RE+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREK-----QSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HPNI+RLY DA
Sbjct: 65 SHLRHPNILRLYGYFH------------------------------DAT----------- 83
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+++L++EYA G +Y ++ + E Y ++ +A+ + H + +IHRDIK
Sbjct: 84 -----RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L G +K+ + G+S
Sbjct: 139 ENLLLGSAGELKIANFGWS 157
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 49/170 (28%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+A+K +D K + R++L E+V M HH N++ +Y Y G EL+
Sbjct: 73 VAVKKMDLRKQ--QRRELLFNEVVIMRDYHHDNVVDMYS------------SYLVGDELW 118
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+V+E+ GG L + I T R++E+
Sbjct: 119 ----------------------------------VVMEFLEGGALTD-IVTHTRMNEEQI 143
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
L +L A+ +LH++ +IHRDIK++++ L+ G +KL D GF ++ +
Sbjct: 144 ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 193
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 61/210 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK----ARKMLSREI 120
Y++ ELG G F+ V+ + T Y A K + K +L+ +R+ + RE+
Sbjct: 14 YEMGEELGSGQFAIVRKCRQK------GTGKEY-AAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ + HPNII L
Sbjct: 67 NILREIRHPNII----------------------------------------------TL 80
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
+++ E + L++E SGGEL++ + + L+ED+A + QIL V +LH + I H D
Sbjct: 81 HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFD 140
Query: 241 IKAENVFLSVRGI----VKLGDLGFSTKLQ 266
+K EN+ L + + +KL D G + K++
Sbjct: 141 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 31 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 83
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 84 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 106
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 107 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 158 ENILLNEDMHIQITDFG 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 61/210 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK----ARKMLSREI 120
Y++ ELG G F+ V+ + T Y A K + K +L+ +R+ + RE+
Sbjct: 7 YEMGEELGSGQFAIVRKCRQK------GTGKEY-AAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ + HPNII L
Sbjct: 60 NILREIRHPNII----------------------------------------------TL 73
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
+++ E + L++E SGGEL++ + + L+ED+A + QIL V +LH + I H D
Sbjct: 74 HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFD 133
Query: 241 IKAENVFLSVRGI----VKLGDLGFSTKLQ 266
+K EN+ L + + +KL D G + K++
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME-SVHH 128
ELGRG F+ V+ I + T Y A K L K + R + EI +E +
Sbjct: 36 ELGRGKFAVVRQCISK------STGQEY-AAKFLKKRRRGQDCRAEILHEIAVLELAKSC 88
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P +I L+EV E +I L++EYA+GGE+++ + L E+ E
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFS-------------------LCLPELAEM-- 127
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+SE+D QIL V +LH +I+H D+K +N+ L
Sbjct: 128 -----------------------VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILL 164
Query: 249 S---VRGIVKLGDLGFSTKL 265
S G +K+ D G S K+
Sbjct: 165 SSIYPLGDIKIVDFGMSRKI 184
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 16 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 68
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 69 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 91
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 92 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 142
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 143 ENILLNEDMHIQITDFG 159
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 31 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 83
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 84 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 106
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 107 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 158 ENILLNEDMHIQITDFG 174
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 32 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 84
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 85 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 107
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 108 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 159 ENILLNEDMHIQITDFG 175
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 32 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 84
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 85 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 107
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 108 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 159 ENILLNEDMHIQITDFG 175
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 39 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 91
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 92 SRLDHPFFVKLYFCFQ-----------------------------DDEKLYF-------- 114
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 115 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 165
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 166 ENILLNEDMHIQITDFG 182
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 35 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 87
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 88 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 110
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 111 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 162 ENILLNEDMHIQITDFG 178
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 32 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 84
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 85 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 107
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 108 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 159 ENILLNEDMHIQITDFG 175
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 35 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 87
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 88 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 110
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 111 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 162 ENILLNEDMHIQITDFG 178
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 141 FGKIFLVVEYASGGELYNKI-TTEGRLSEDDAK--IYFLQ-------ILLYEVLETFGKI 190
FG++ E A+G +L KI T G +++ K I + I LY+ E+ I
Sbjct: 102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI 161
Query: 191 FLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
LV+EY GGEL+++I E L+E D ++ QI ++H+H I+H D+K EN+
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 250 VRGI--VKLGDLGFSTK 264
R +K+ D G + +
Sbjct: 222 NRDAKQIKIIDFGLARR 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 37 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 89
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 90 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 112
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 113 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 163
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 164 ENILLNEDMHIQITDFG 180
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L + E+ +FLV + GEL++ +T + LSE + + +L AV LH +I+
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
HRD+K EN+ L ++L D GFS L+
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGFSCHLE 251
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 62/196 (31%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVH-HP 129
LG G+FS + +H+ A+KI+ K + +EI +++ HP
Sbjct: 19 LGEGSFSICRKCVHK-------KSNQAFAVKIISK-----RMEANTQKEITALKLCEGHP 66
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
NI++L+EV ++ L TF
Sbjct: 67 NIVKLHEVF------------------------------------------HDQLHTF-- 82
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
LV+E +GGEL+ +I + SE +A +++SAV H+HD ++HRD+K EN+ +
Sbjct: 83 --LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 250 VRGI---VKLGDLGFS 262
+K+ D GF+
Sbjct: 141 DENDNLEIKIIDFGFA 156
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 61/210 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK----ARKMLSREI 120
Y++ ELG G F+ V+ + T Y A K + K +L +R+ + RE+
Sbjct: 28 YEMGEELGSGQFAIVRKCRQK------GTGKEY-AAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ + HPNII L
Sbjct: 81 NILREIRHPNII----------------------------------------------TL 94
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
+++ E + L++E SGGEL++ + + L+ED+A + QIL V +LH + I H D
Sbjct: 95 HDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFD 154
Query: 241 IKAENVFLSVRGI----VKLGDLGFSTKLQ 266
+K EN+ L + + +KL D G + K++
Sbjct: 155 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 130 NIIRLYEVLETFG-----KIFLVVEYASGG----ELYNKITTEGRLSEDDAKIYFLQ--- 177
+I +++E ET G ++ L E A+G + K +G+ S + +I L+
Sbjct: 19 DIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK 78
Query: 178 ----ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHD 233
+ L ++ E+ ++LV++ SGGEL+++I +G +E DA Q+L AV +LH
Sbjct: 79 HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 234 RDIIHRDIKAENVF 247
I+HRD+K EN+
Sbjct: 139 MGIVHRDLKPENLL 152
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+EY +GG L + + TE + E + L A++ LH +IHRDIK++N+ L
Sbjct: 92 ELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 150
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G VKL D GF ++
Sbjct: 151 GMDGSVKLTDFGFCAQI 167
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+EY +GG L + + TE + E + L A++ LH +IHRDIK++N+ L
Sbjct: 91 ELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G VKL D GF ++
Sbjct: 150 GMDGSVKLTDFGFCAQI 166
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+EY +GG L + + TE + E + L A++ LH +IHRDIK++N+ L
Sbjct: 91 ELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G VKL D GF ++
Sbjct: 150 GMDGSVKLTDFGFCAQI 166
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+EY +GG L + + TE + E + L A++ LH +IHRDIK++N+ L
Sbjct: 91 ELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G VKL D GF ++
Sbjct: 150 GMDGSVKLTDFGFCAQI 166
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 59/210 (28%)
Query: 64 LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAI---KILDKAKLTPKARKMLSREI 120
Y + ELG G F+ VK + T + Y A K +A R+ + RE+
Sbjct: 13 FYDIGEELGSGQFAIVKKCREK------STGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
+ V HPNII L
Sbjct: 67 SILRQVLHPNII----------------------------------------------TL 80
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I H D
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFD 140
Query: 241 IKAENVFLSVRGI----VKLGDLGFSTKLQ 266
+K EN+ L + I +KL D G + +++
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FST +A L T Y AIKIL+K + + + ++RE M
Sbjct: 32 FKFGKILGEGSFSTTVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 84
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 85 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 107
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA GEL I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 108 ---------GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 159 ENILLNEDMHIQITDFG 175
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+ +T K++ V++Y +GGEL+ + E E A+ Y +I SA+ +LH +I++R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K EN+ L +G + L D G
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLC 186
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 238 HRDIKAENVFLSVRGI----VKLGDLGFSTKLQ 266
H D+K EN+ L + I +KL D G + +++
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 238 HRDIKAENVFLSVRGI----VKLGDLGFSTKLQ 266
H D+K EN+ L + I +KL D G + +++
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 238 HRDIKAENVFLSVRGI----VKLGDLGFSTKLQ 266
H D+K EN+ L + I +KL D G + +++
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 238 HRDIKAENVFLSVRGI----VKLGDLGFSTKLQ 266
H D+K EN+ L + I +KL D G + +++
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L++V E + L++E SGGEL++ + + LSE++A + QIL V +LH + I
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 238 HRDIKAENVFLSVRGI----VKLGDLGFSTKLQ 266
H D+K EN+ L + I +KL D G + +++
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 12 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 63
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 64 VSILKEIQHPNVI----------------------------------------------T 77
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 51/203 (25%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK--ARKMLSREIVSMESVHH 128
LGRG F V A +++ C Y AIK + +L + AR+ + RE+ ++ + H
Sbjct: 13 LGRGGFGVVFEAKNKVDD---CNY----AIK---RIRLPNRELAREKVMREVKALAKLEH 62
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYF---LQILLYEVLE 185
P I+R + K TTE +L K+Y +Q+ E L+
Sbjct: 63 PGIVRYFNAW------------------LEKNTTE-KLQPSSPKVYLYIQMQLCRKENLK 103
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIY-FLQILSAVKHLHDRDIIHRDIKAE 244
+ + + T E R E ++ FLQI AV+ LH + ++HRD+K
Sbjct: 104 DW--------------MNGRCTIEER--ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPS 147
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+F ++ +VK+GD G T + Q
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQ 170
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 12 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 63
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 64 VSILKEIQHPNVI----------------------------------------------T 77
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGKFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 188 GKIFLVVEYASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
GK+++++E+ GG + + R L+E ++ Q+L A+ LH + IIHRD+KA NV
Sbjct: 89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 148
Query: 247 FLSVRGIVKLGDLGFSTK 264
+++ G ++L D G S K
Sbjct: 149 LMTLEGDIRLADFGVSAK 166
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+ +T +++ V+EY +GG+L I G+ E A Y +I + LH R II+R
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYR 144
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K +NV L G +K+ D G
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMC 167
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 64/207 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI-VSM 123
Y ++ +G G++S K +H+ T + Y A+K++DK+K P S EI + +
Sbjct: 29 YVVKETIGVGSYSECKRCVHK------ATNMEY-AVKVIDKSKRDP------SEEIEILL 75
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HPNII L +V + ++LV E GGEL +KI + SE +A V
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF---------V 126
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
L T GK V++LH + ++HRD+K
Sbjct: 127 LHTIGK-------------------------------------TVEYLHSQGVVHRDLKP 149
Query: 244 ENV-FLSVRG---IVKLGDLGFSTKLQ 266
N+ ++ G +++ D GF+ +L+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 188 GKIFLVVEYASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
GK+++++E+ GG + + R L+E ++ Q+L A+ LH + IIHRD+KA NV
Sbjct: 81 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 140
Query: 247 FLSVRGIVKLGDLGFSTK 264
+++ G ++L D G S K
Sbjct: 141 LMTLEGDIRLADFGVSAK 158
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ + T K+ +++ +GG+L+ ++ G SE D + Y +I+ ++H+H+R ++
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
+RD+K N+ L G V++ DLG + +
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSK 344
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ + T K+ +++ +GG+L+ ++ G SE D + Y +I+ ++H+H+R ++
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
+RD+K N+ L G V++ DLG + +
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSK 344
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 64/207 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI-VSM 123
Y ++ +G G++S K +H+ T + Y A+K++DK+K P S EI + +
Sbjct: 29 YVVKETIGVGSYSECKRCVHK------ATNMEY-AVKVIDKSKRDP------SEEIEILL 75
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HPNII L +V + ++LV E GGEL +KI + SE +A V
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF---------V 126
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
L T GK V++LH + ++HRD+K
Sbjct: 127 LHTIGK-------------------------------------TVEYLHSQGVVHRDLKP 149
Query: 244 ENV-FLSVRG---IVKLGDLGFSTKLQ 266
N+ ++ G +++ D GF+ +L+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ + T K+ +++ +GG+L+ ++ G SE D + Y +I+ ++H+H+R ++
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
+RD+K N+ L G V++ DLG + +
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSK 344
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ + T K+ +++ +GG+L+ ++ G SE D + Y +I+ ++H+H+R ++
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
+RD+K N+ L G V++ DLG + +
Sbjct: 314 YRDLKPANILLDEHGHVRISDLGLACDFSK 343
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+EY +GG L + + TE + E + L A++ LH +IHR+IK++N+ L
Sbjct: 92 ELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL 150
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G VKL D GF ++
Sbjct: 151 GMDGSVKLTDFGFCAQI 167
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 54/197 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-KMLSREIVSM 123
+K LG G+FSTV +A L T Y AIKIL+K + + + ++RE M
Sbjct: 34 FKFGKILGEGSFSTVVLARE------LATSREY-AIKILEKRHIIKENKVPYVTRERDVM 86
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ HP ++LY + DD K+YF
Sbjct: 87 SRLDHPFFVKLYFTFQ-----------------------------DDEKLYF-------- 109
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+ YA G L I G E + Y +I+SA+++LH + IIHRD+K
Sbjct: 110 ---------GLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLG 260
EN+ L+ +++ D G
Sbjct: 161 ENILLNEDMHIQITDFG 177
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 100 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 158
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 159 THDGRVKLSDFGFCAQVSK 177
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 91 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 149
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 150 THDGRVKLSDFGFCAQVSK 168
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 102 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 160
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 161 THDGRVKLSDFGFCAQVSK 179
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 95 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 153
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 154 THDGRVKLSDFGFCAQVSK 172
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 145 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 203
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 204 THDGRVKLSDFGFCAQVSK 222
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 171 AKIY--FLQILLYEVLETFGKIFLVVEYASGGEL----YNKITTEGRLSEDDAKIYFLQI 224
AK++ F+ L Y ET + LV+ +GG++ YN E A Y QI
Sbjct: 240 AKVHSRFIVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+S ++HLH R+II+RD+K ENV L G V++ DLG + +L+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 171 AKIY--FLQILLYEVLETFGKIFLVVEYASGGEL----YNKITTEGRLSEDDAKIYFLQI 224
AK++ F+ L Y ET + LV+ +GG++ YN E A Y QI
Sbjct: 240 AKVHSRFIVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+S ++HLH R+II+RD+K ENV L G V++ DLG + +L+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 171 AKIY--FLQILLYEVLETFGKIFLVVEYASGGEL----YNKITTEGRLSEDDAKIYFLQI 224
AK++ F+ L Y ET + LV+ +GG++ YN E A Y QI
Sbjct: 240 AKVHSRFIVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+S ++HLH R+II+RD+K ENV L G V++ DLG + +L+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 171 AKIY--FLQILLYEVLETFGKIFLVVEYASGGEL----YNKITTEGRLSEDDAKIYFLQI 224
AK++ F+ L Y ET + LV+ +GG++ YN E A Y QI
Sbjct: 240 AKVHSRFIVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+S ++HLH R+II+RD+K ENV L G V++ DLG + +L+
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++V+E+ GG L + I T R++E+ L +L A+ LH + +IHRDIK++++ L
Sbjct: 222 ELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 280
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
+ G VKL D GF ++ +
Sbjct: 281 THDGRVKLSDFGFCAQVSK 299
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 62/233 (26%)
Query: 40 EKTQNQLQNDKKWQHETSLGKRVA--LYKLQNELGRGNFSTVKMAIHEIYVPILCTYISY 97
++ +NQ Q+D + ++G K E+GRG+F TV + T +
Sbjct: 1 QEERNQQQDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTE------TTVEV 54
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGK----IFLVVEYASG 153
++ D+ KLT R+ E ++ + HPNI+R Y+ E+ K I LV E +
Sbjct: 55 AWCELQDR-KLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTS 113
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
G L+T+ K F V KI
Sbjct: 114 G----------------------------TLKTYLKRFKVX----------KIKV----- 130
Query: 214 EDDAKIYFLQILSAVKHLHDR--DIIHRDIKAENVFLS-VRGIVKLGDLGFST 263
+ + QIL ++ LH R IIHRD+K +N+F++ G VK+GDLG +T
Sbjct: 131 ---LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 56/220 (25%)
Query: 46 LQNDKKWQHETSLGKRVALYKLQNELGRGNFSTV-KMAIHEIYVPILCTYISYLAIKILD 104
Q+ K+++H T +++ ELG G F V K E V A K++D
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV--------LAAAKVID 71
Query: 105 KAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEG 164
M+ +I++ S HPNI++L + +++++E+ +GG +
Sbjct: 72 TKSEEELEDYMVEIDILA--SCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-------- 121
Query: 165 RLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 224
DA + L E L+E ++ Q
Sbjct: 122 -----DAVMLEL--------------------------------ERPLTESQIQVVCKQT 144
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
L A+ +LHD IIHRD+KA N+ ++ G +KL D G S K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGVFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L++E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 63/210 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y ELG G F+ VK + T + Y A I K + T +R+ +SRE + E
Sbjct: 13 YDTGEELGSGQFAVVKKCREK------STGLQYAAKFI--KKRRTKSSRRGVSREDIERE 64
Query: 125 -----SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 179
+ HPN+I
Sbjct: 65 VSILKEIQHPNVI----------------------------------------------T 78
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+EV E + L+ E +GGEL++ + + L+E++A + QIL+ V +LH I H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 240 DIKAENVFLSVRGI----VKLGDLGFSTKL 265
D+K EN+ L R + +K+ D G + K+
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 56/220 (25%)
Query: 46 LQNDKKWQHETSLGKRVALYKLQNELGRGNFSTV-KMAIHEIYVPILCTYISYLAIKILD 104
Q+ K+++H T +++ ELG G F V K E V A K++D
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV--------LAAAKVID 71
Query: 105 KAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEG 164
M+ +I++ S HPNI++L + +++++E+ +GG +
Sbjct: 72 TKSEEELEDYMVEIDILA--SCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-------- 121
Query: 165 RLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 224
DA + L E L+E ++ Q
Sbjct: 122 -----DAVMLEL--------------------------------ERPLTESQIQVVCKQT 144
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
L A+ +LHD IIHRD+KA N+ ++ G +KL D G S K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 56/220 (25%)
Query: 46 LQNDKKWQHETSLGKRVALYKLQNELGRGNFSTV-KMAIHEIYVPILCTYISYLAIKILD 104
Q+ K+++H T +++ ELG G F V K E V A K++D
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSV--------LAAAKVID 71
Query: 105 KAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEG 164
M+ +I++ S HPNI++L + +++++E+ +GG +
Sbjct: 72 TKSEEELEDYMVEIDILA--SCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-------- 121
Query: 165 RLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQI 224
DA + L E L+E ++ Q
Sbjct: 122 -----DAVMLEL--------------------------------ERPLTESQIQVVCKQT 144
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
L A+ +LHD IIHRD+KA N+ ++ G +KL D G S K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 61/209 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILD-------KAKLTPKARKMLS 117
Y+ + LGRG S V+ IH+ P Y A+KI+D A+ + R+
Sbjct: 6 YEPKEILGRGVSSVVRRCIHK---PTCKEY----AVKIIDVTGGGSFSAEEVQELREATL 58
Query: 118 REIVSMESVH-HPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E+ + V HPNII+L + ET
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYET------------------------------------ 82
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
TF FLV + GEL++ +T + LSE + + +L + LH +I
Sbjct: 83 --------NTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 132
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+HRD+K EN+ L +KL D GFS +L
Sbjct: 133 VHRDLKPENILLDDDMNIKLTDFGFSCQL 161
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 260 GFSTKLQ 266
G L+
Sbjct: 156 GSGALLK 162
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 260 GFSTKLQ 266
G L+
Sbjct: 203 GSGALLK 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 260 GFSTKLQ 266
G L+
Sbjct: 188 GSGALLK 194
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 260 GFSTKLQ 266
G L+
Sbjct: 208 GSGALLK 214
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 260 GFSTKLQ 266
G L+
Sbjct: 203 GSGALLK 209
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 260 G 260
G
Sbjct: 203 G 203
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 260 GFSTKLQ 266
G L+
Sbjct: 176 GSGALLK 182
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 260 GFSTKLQ 266
G L+
Sbjct: 188 GSGALLK 194
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 260 GFSTKLQ 266
G L+
Sbjct: 175 GSGALLK 181
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Query: 260 GFSTKLQ 266
G L+
Sbjct: 183 GSGALLK 189
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++++++E+ GG L + I ++ RL+E+ +L A+ +LH + +IHRDIK++++ L
Sbjct: 116 ELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
++ G VKL D GF ++ +
Sbjct: 175 TLDGRVKLSDFGFCAQISK 193
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 188 GKIFLVVEYASGGELYN-KITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+++++E+ +GG + + E L+E ++ Q L A+ +LHD IIHRD+KA N+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 247 FLSVRGIVKLGDLGFSTK 264
++ G +KL D G S K
Sbjct: 140 LFTLDGDIKLADFGVSAK 157
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 260 GFSTKLQ 266
G L+
Sbjct: 161 GSGALLK 167
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 260 GFSTKLQ 266
G L+
Sbjct: 176 GSGALLK 182
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 260 GFSTKLQ 266
G L+
Sbjct: 189 GSGALLK 195
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 260 GFSTKLQ 266
G L+
Sbjct: 188 GSGALLK 194
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 260 GFSTKLQ 266
G L+
Sbjct: 188 GSGALLK 194
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 260 GFSTKLQ 266
G L+
Sbjct: 176 GSGALLK 182
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Query: 260 GFSTKLQ 266
G L+
Sbjct: 195 GSGALLK 201
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 260 GFSTKLQ 266
G L+
Sbjct: 189 GSGALLK 195
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 260 GFSTKLQ 266
G L+
Sbjct: 189 GSGALLK 195
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 260 G 260
G
Sbjct: 161 G 161
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 61/209 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILD-------KAKLTPKARKMLS 117
Y+ + LGRG S V+ IH+ P Y A+KI+D A+ + R+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHK---PTCKEY----AVKIIDVTGGGSFSAEEVQELREATL 71
Query: 118 REIVSMESVH-HPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E+ + V HPNII+L + ET
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYET------------------------------------ 95
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
TF FLV + GEL++ +T + LSE + + +L + LH +I
Sbjct: 96 --------NTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+HRD+K EN+ L +KL D GFS +L
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQL 174
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 260 GFSTKLQ 266
G L+
Sbjct: 189 GSGALLK 195
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 260 GFSTKLQ 266
G L+
Sbjct: 175 GSGALLK 181
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 260 GFSTKLQ 266
G L+
Sbjct: 156 GSGALLK 162
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 61/209 (29%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILD-------KAKLTPKARKMLS 117
Y+ + LGRG S V+ IH+ P Y A+KI+D A+ + R+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHK---PTCKEY----AVKIIDVTGGGSFSAEEVQELREATL 71
Query: 118 REIVSMESVH-HPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E+ + V HPNII+L + ET
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYET------------------------------------ 95
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
TF FLV + GEL++ +T + LSE + + +L + LH +I
Sbjct: 96 --------NTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+HRD+K EN+ L +KL D GFS +L
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQL 174
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 99 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
Query: 260 GFSTKLQ 266
G L+
Sbjct: 159 GSGALLK 165
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 260 GFSTKLQ 266
G L+
Sbjct: 161 GSGALLK 167
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 260 GFSTKLQ 266
G L+
Sbjct: 156 GSGALLK 162
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Query: 260 GFSTKLQ 266
G L+
Sbjct: 160 GSGALLK 166
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDL 259
+L++ IT G L E+ A+ +F Q+L AV+H H+ ++HRDIK EN+ + + RG +KL D
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Query: 260 GFSTKLQ 266
G L+
Sbjct: 160 GSGALLK 166
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 190 IFLVVEYASGGELYNKITT-EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++LV++Y GG+L ++ E +L ED A+ Y +++ A+ +H +HRDIK +NV L
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 208
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
V G ++L D G K+
Sbjct: 209 DVNGHIRLADFGSCLKMND 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 190 IFLVVEYASGGELYNKITT-EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++LV++Y GG+L ++ E +L ED A+ Y +++ A+ +H +HRDIK +NV L
Sbjct: 165 LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 224
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
V G ++L D G K+
Sbjct: 225 DVNGHIRLADFGSCLKMND 243
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+ +T +++ V+EY +GG+L I GR E A Y +I + L + II+R
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 240 DIKAENVFLSVRGIVKLGDLG 260
D+K +NV L G +K+ D G
Sbjct: 146 DLKLDNVMLDSEGHIKIADFG 166
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L+ +T +++ V+EY +GG+L I GR E A Y +I + L + II+R
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466
Query: 240 DIKAENVFLSVRGIVKLGDLG 260
D+K +NV L G +K+ D G
Sbjct: 467 DLKLDNVMLDSEGHIKIADFG 487
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITT-EGRLSEDDAKIYFLQILSAVKHLHDRDIIH 238
L+ + ++LV++Y GG+L ++ E RL E+ A+ Y +++ A+ +H +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 239 RDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
RDIK +N+ + + G ++L D G KL +
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLME 227
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 35/154 (22%)
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 169
P++ K REI + + H NI++++E+L SG +L + + G L+E
Sbjct: 49 PQSVKHALREIKIIRRLDHDNIVKVFEILG-----------PSGSQLTDDV---GSLTE- 93
Query: 170 DAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVK 229
+++V EY +L N + +G L E+ A+++ Q+L +K
Sbjct: 94 -----------------LNSVYIVQEYMET-DLAN-VLEQGPLLEEHARLFMYQLLRGLK 134
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIV-KLGDLGFS 262
++H +++HRD+K N+F++ +V K+GD G +
Sbjct: 135 YIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Query: 140 TFGKIFLVVEYASGGE----LYNKITTEGRLSEDDAKIYFLQIL-------LYEVLETFG 188
FG + LV E +SG E NK ++ + + +A+I L+ L ++EV E +
Sbjct: 34 AFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH 93
Query: 189 KIFLVVEYASGGELYNKI-TTEGR---LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+++V+E GGEL +I + + R LSE Q+++A+ + H + ++H+D+K E
Sbjct: 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 245 NVFL---SVRGIVKLGDLGFS 262
N+ S +K+ D G +
Sbjct: 154 NILFQDTSPHSPIKIIDFGLA 174
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ LY + + + +E GG L + +G L ED A Y Q L +++LH R I+
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 238 HRDIKAENVFLSVRGI-VKLGDLGFSTKLQ 266
H D+KA+NV LS G L D G + LQ
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQ 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ LY + + + +E GG L + +G L ED A Y Q L +++LH R I+
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 238 HRDIKAENVFLSVRGI-VKLGDLGFSTKLQ 266
H D+KA+NV LS G L D G + LQ
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQ 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 58/229 (25%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK--ARKMLSREIVSMESVHH 128
+GRG F V A +++ C Y AIK + +L + AR+ + RE+ ++ + H
Sbjct: 14 MGRGGFGVVFEAKNKVDD---CNY----AIK---RIRLPNRELAREKVMREVKALAKLEH 63
Query: 129 PNIIRLYEVL---------ETFGKIFLVVEYASGG-----------------ELYNKITT 162
P I+R + E +I+L E + ++ T
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 163 EGRLSEDDAKIYF---LQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKI 219
G+L K+Y +Q+ E L+ + + + + E R E +
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDW--------------MNRRCSLEDR--EHGVCL 167
Query: 220 Y-FLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
+ F+QI AV+ LH + ++HRD+K N+F ++ +VK+GD G T + Q
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G L E +IL + +LH IHRDIKA NV L
Sbjct: 79 KLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 249 SVRGIVKLGDLGFSTKL 265
S G VKL D G + +L
Sbjct: 138 SEHGEVKLADFGVAGQL 154
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G L E +IL + +LH IHRDIKA NV L
Sbjct: 94 KLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 152
Query: 249 SVRGIVKLGDLGFSTKL 265
S G VKL D G + +L
Sbjct: 153 SEHGEVKLADFGVAGQL 169
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G L E +IL + +LH IHRDIKA NV L
Sbjct: 79 KLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 249 SVRGIVKLGDLGFSTKL 265
S G VKL D G + +L
Sbjct: 138 SEHGEVKLADFGVAGQL 154
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G L E +IL + +LH IHRDIKA NV L
Sbjct: 99 KLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 157
Query: 249 SVRGIVKLGDLGFSTKL 265
S G VKL D G + +L
Sbjct: 158 SEHGEVKLADFGVAGQL 174
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 190 IFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+F+ +EY G LY+ I +E D+ F QIL A+ ++H + IIHRD+K N+F+
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
VK+GD G + + +
Sbjct: 150 DESRNVKIGDFGLAKNVHR 168
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 78/199 (39%), Gaps = 46/199 (23%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+LQ +G G + V+ A +AIK ++ K ++L +EI +M
Sbjct: 17 YELQEVIGSGATAVVQAAY-------CAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMS 68
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
HHPNI+ Y +++LV++ SGG VL
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGS---------------------------VL 101
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+ I E+ SG L E ++L +++LH IHRD+KA
Sbjct: 102 DIIKHIVAKGEHKSG-----------VLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 150
Query: 245 NVFLSVRGIVKLGDLGFST 263
N+ L G V++ D G S
Sbjct: 151 NILLGEDGSVQIADFGVSA 169
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 54/199 (27%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKMLSREIVSM 123
+++ LG+G F V +A + +I +A+K+L K+++ + L REI
Sbjct: 25 FEIGRPLGKGKFGNVYLAREK-----KSHFI--VALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+HHPNI+RLY Y++
Sbjct: 78 AHLHHPNILRLYNYF------------------YDR------------------------ 95
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+I+L++EYA GELY ++ E ++ A+ + H + +IHRDIK
Sbjct: 96 ----RRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKP 151
Query: 244 ENVFLSVRGIVKLGDLGFS 262
EN+ L ++G +K+ D G+S
Sbjct: 152 ENLLLGLKGELKIADFGWS 170
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 78/199 (39%), Gaps = 46/199 (23%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+LQ +G G + V+ A +AIK ++ K ++L +EI +M
Sbjct: 12 YELQEVIGSGATAVVQAAY-------CAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMS 63
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
HHPNI+ Y +++LV++ SGG VL
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGS---------------------------VL 96
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+ I E+ SG L E ++L +++LH IHRD+KA
Sbjct: 97 DIIKHIVAKGEHKSG-----------VLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 145
Query: 245 NVFLSVRGIVKLGDLGFST 263
N+ L G V++ D G S
Sbjct: 146 NILLGEDGSVQIADFGVSA 164
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
LY+V+ T ++ LV E+ EG L AK + LQ+L+ + + HDR ++HR
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K +N+ ++ G +K+ D G +
Sbjct: 125 DLKPQNLLINREGELKIADFGLA 147
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
LY+V+ T ++ LV E+ EG L AK + LQ+L+ + + HDR ++HR
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K +N+ ++ G +K+ D G +
Sbjct: 125 DLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
LY+V+ T ++ LV E+ EG L AK + LQ+L+ + + HDR ++HR
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+K +N+ ++ G +K+ D G +
Sbjct: 125 DLKPQNLLINREGELKIADFGLA 147
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 64/207 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI-VSM 123
Y+++ ++G G++S K IH+ T + + A+KI+DK+K P + EI + +
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHK------ATNMEF-AVKIIDKSKRDP------TEEIEILL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HPNII L +V + +++V E GGEL +KI + SE +A +L+ +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-----AVLFTI 125
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+T V++LH + ++HRD+K
Sbjct: 126 TKT-----------------------------------------VEYLHAQGVVHRDLKP 144
Query: 244 ENV-FLSVRG---IVKLGDLGFSTKLQ 266
N+ ++ G +++ D GF+ +L+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G L E +IL + +LH IHRDIKA NV L
Sbjct: 91 KLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL 149
Query: 249 SVRGIVKLGDLGFSTKL 265
S +G VKL D G + +L
Sbjct: 150 SEQGDVKLADFGVAGQL 166
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 178 ILLYEVLETFGKIFLVVE-YASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
I + ++ E G LV+E + SG +L+ I RL E A F Q++SAV +L +DI
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI 151
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
IHRDIK EN+ ++ +KL D G + L++
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 189 KIFLVVEYASGG--ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDR--DIIHRDIKAE 244
+ L+ E G E K+ + G LS D F Q AV+H+H + IIHRD+K E
Sbjct: 108 EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVE 167
Query: 245 NVFLSVRGIVKLGDLGFSTKL 265
N+ LS +G +KL D G +T +
Sbjct: 168 NLLLSNQGTIKLCDFGSATTI 188
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG+L N + + + E AK Y +++ A+ +H +IHRD+K +N+ L
Sbjct: 150 LYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 250 VRGIVKLGDLGFSTKLQQ 267
G +KL D G K+ +
Sbjct: 209 KHGHLKLADFGTCMKMDE 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ LY + + + +E GG L I G L ED A Y Q L +++LH R I+
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 238 HRDIKAENVFLSVRGI-VKLGDLGFSTKLQ 266
H D+KA+NV LS G L D G + LQ
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQ 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 53/200 (26%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK--ILDKAKLTPKARKMLSREIVS 122
+K +LG G ++TV +++ T Y+A+K LD + TP REI
Sbjct: 7 FKQLEKLGNGTYATVYKGLNK-------TTGVYVALKEVKLDSEEGTPSTA---IREISL 56
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
M+ + H NI+RLY+V+ T NK+T ++D K Y
Sbjct: 57 MKELKHENIVRLYDVIHT----------------ENKLTLVFEFMDNDLKKYMDS----- 95
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
T G T L + K + Q+L + H+ I+HRD+K
Sbjct: 96 --RTVG------------------NTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLK 135
Query: 243 AENVFLSVRGIVKLGDLGFS 262
+N+ ++ RG +KLGD G +
Sbjct: 136 PQNLLINKRGQLKLGDFGLA 155
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 61/202 (30%)
Query: 65 YKLQNELGRGNFSTVKMA----IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI 120
Y+ ++G G + TV A HEI ++ +++ D + P + REI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEI--------VALKRVRLDDDDEGVPSSA---LREI 52
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ + H NI+RL++VL + K+ LV E+ + D K YF
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFC----------------DQDLKKYF----- 91
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
+ G L + K + Q+L + H R+++HRD
Sbjct: 92 -------------------------DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 241 IKAENVFLSVRGIVKLGDLGFS 262
+K +N+ ++ G +KL D G +
Sbjct: 127 LKPQNLLINRNGELKLADFGLA 148
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ LY + + + +E GG L I G L ED A Y Q L +++LH R I+
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 238 HRDIKAENVFLSVRGI-VKLGDLGFSTKLQ 266
H D+KA+NV LS G L D G + LQ
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQ 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+ LY + + + +E GG L I G L ED A Y Q L +++LH R I+
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 238 HRDIKAENVFLSVRGI-VKLGDLGFSTKLQ 266
H D+KA+NV LS G L D G + LQ
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQ 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 187 FGKIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKA 243
F KIF+ E GG L + ++ G L +++ I F QIL +K+LHD I+HRDIK
Sbjct: 93 FIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 244 ENVFLSV-RGIVKLGDLGFSTKL 265
+NV ++ G++K+ D G S +L
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRL 173
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 64/207 (30%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI-VSM 123
Y+++ ++G G++S K IH+ T + A+KI+DK+K P + EI + +
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHK------ATNXEF-AVKIIDKSKRDP------TEEIEILL 70
Query: 124 ESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HPNII L +V + +++V E GGEL +KI + SE +A +L+ +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS-----AVLFTI 125
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+T V++LH + ++HRD+K
Sbjct: 126 TKT-----------------------------------------VEYLHAQGVVHRDLKP 144
Query: 244 ENV-FLSVRG---IVKLGDLGFSTKLQ 266
N+ ++ G +++ D GF+ +L+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 15 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L ++ L
Sbjct: 71 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDR------------------------L 105
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 106 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 144
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQ 167
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 187 FGKIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKA 243
F KIF+ E GG L + ++ G L +++ I F QIL +K+LHD I+HRDIK
Sbjct: 79 FIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 136
Query: 244 ENVFLSV-RGIVKLGDLGFSTKL 265
+NV ++ G++K+ D G S +L
Sbjct: 137 DNVLINTYSGVLKISDFGTSKRL 159
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+++++EY GG + + G E +IL + +LH IHRDIKA NV L
Sbjct: 95 KLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL 153
Query: 249 SVRGIVKLGDLGFSTKL 265
S +G VKL D G + +L
Sbjct: 154 SEQGDVKLADFGVAGQL 170
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 53/174 (30%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
L K LD +T ++ML E+ + + HPNI+R Y+ +
Sbjct: 34 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI------------------- 74
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKIT--TEGR--LS 213
+ T +++V+EY GG+L + IT T+ R L
Sbjct: 75 -------------------------IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 214 EDDAKIYFLQILSAVKHLHDRD-----IIHRDIKAENVFLSVRGIVKLGDLGFS 262
E+ Q+ A+K H R ++HRD+K NVFL + VKLGD G +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 190 IFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
++LV+EY GG+L ++ G R+ + A+ Y +I+ A+ +H +HRDIK +N+ L
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 249 SVRGIVKLGDLGFSTKLQ 266
G ++L D G KL+
Sbjct: 196 DRCGHIRLADFGSCLKLR 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 53/174 (30%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
L K LD +T ++ML E+ + + HPNI+R Y+ +
Sbjct: 34 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI------------------- 74
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKIT--TEGR--LS 213
+ T +++V+EY GG+L + IT T+ R L
Sbjct: 75 -------------------------IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 214 EDDAKIYFLQILSAVKHLHDRD-----IIHRDIKAENVFLSVRGIVKLGDLGFS 262
E+ Q+ A+K H R ++HRD+K NVFL + VKLGD G +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 53/174 (30%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
L K LD +T ++ML E+ + + HPNI+R Y+ +
Sbjct: 34 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI------------------- 74
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKIT--TEGR--LS 213
+ T +++V+EY GG+L + IT T+ R L
Sbjct: 75 -------------------------IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 214 EDDAKIYFLQILSAVKHLHDRD-----IIHRDIKAENVFLSVRGIVKLGDLGFS 262
E+ Q+ A+K H R ++HRD+K NVFL + VKLGD G +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 189 KIFLVVEYASGGELYNKI-TTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENV 246
+++LV+E+ G + + I T+G +++ Y +IL + HLH +IHRDIK +NV
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 160
Query: 247 FLSVRGIVKLGDLGFSTKLQQ 267
L+ VKL D G S +L +
Sbjct: 161 LLTENAEVKLVDFGVSAQLDR 181
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
Y QI++ + H +IIHRDIK EN+ +S G+VKL D GF+ L
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 140 TFGKIFLVVEYASGGELY--NKITTEGRLSEDDAKIYFLQ-------------ILLYEVL 184
+FGK+FL E+ + + + + L +DD + ++ ++
Sbjct: 29 SFGKVFLA-EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T +F V+EY +GG+L I + + A Y +I+ ++ LH + I++RD+K +
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 245 NVFLSVRGIVKLGDLG 260
N+ L G +K+ D G
Sbjct: 148 NILLDKDGHIKIADFG 163
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 21 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + RL +
Sbjct: 77 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLD------RLRKHQGH------------ 117
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 118 ------FLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 150
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQ 173
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG+L N + + + E A+ Y +++ A+ +H IHRD+K +N+ L
Sbjct: 144 LYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 202
Query: 250 VRGIVKLGDLGFSTKLQQ 267
G +KL D G K+ +
Sbjct: 203 KSGHLKLADFGTCMKMNK 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG+L N + + + E A+ Y +++ A+ +H IHRD+K +N+ L
Sbjct: 149 LYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 250 VRGIVKLGDLGFSTKLQQ 267
G +KL D G K+ +
Sbjct: 208 KSGHLKLADFGTCMKMNK 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+++V+EY GG+L N + + + E A+ Y +++ A+ +H IHRD+K +N+ L
Sbjct: 149 LYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 250 VRGIVKLGDLGFSTKLQQ 267
G +KL D G K+ +
Sbjct: 208 KSGHLKLADFGTCMKMNK 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 46/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ +HHPNI+ L +V+ + + LV E F++
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFE-------------------------FME 102
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
L +VL+ E +G L + KIY Q+L V H H I+
Sbjct: 103 KDLKKVLD---------ENKTG------------LQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 55/213 (25%)
Query: 56 TSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKAR-K 114
T +G+++ +K+ N LG+G+F+ V A I+ + +AIK++DK + +
Sbjct: 4 TCIGEKIEDFKVGNLLGKGSFAGVYRA-ESIHTGL------EVAIKMIDKKAMYKAGMVQ 56
Query: 115 MLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIY 174
+ E+ + HP+I+ ELYN Y
Sbjct: 57 RVQNEVKIHCQLKHPSIL----------------------ELYN---------------Y 79
Query: 175 FLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHD 233
F E ++LV+E GE+ + + SE++A+ + QI++ + +LH
Sbjct: 80 F---------EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 234 RDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
I+HRD+ N+ L+ +K+ D G +T+L+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 46/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ +HHPNI+ L +V+ + + LV E F++
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFE-------------------------FME 102
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
L +VL+ E +G L + KIY Q+L V H H I+
Sbjct: 103 KDLKKVLD---------ENKTG------------LQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA 166
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 140 TFGKIFLVVEYASGGELY--NKITTEGRLSEDDAKIYFLQ-------------ILLYEVL 184
+FGK+FL E+ + + + + L +DD + ++ ++
Sbjct: 30 SFGKVFLA-EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 88
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
+T +F V+EY +GG+L I + + A Y +I+ ++ LH + I++RD+K +
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 245 NVFLSVRGIVKLGDLG 260
N+ L G +K+ D G
Sbjct: 149 NILLDKDGHIKIADFG 164
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 189 KIFLVVEYASGG--ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
K+++V+EY G E+ + + E R A YF Q++ +++LH + I+H+DIK N+
Sbjct: 82 KMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNL 140
Query: 247 FLSVRGIVKLGDLGFSTKLQ 266
L+ G +K+ LG + L
Sbjct: 141 LLTTGGTLKISALGVAEALH 160
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 61/202 (30%)
Query: 65 YKLQNELGRGNFSTVKMA----IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI 120
Y+ ++G G + TV A HEI ++ +++ D + P + REI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEI--------VALKRVRLDDDDEGVPSSA---LREI 52
Query: 121 VSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILL 180
++ + H NI+RL++VL + K+ LV E+ + D K YF
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFC----------------DQDLKKYF----- 91
Query: 181 YEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRD 240
+ G L + K + Q+L + H R+++HRD
Sbjct: 92 -------------------------DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 241 IKAENVFLSVRGIVKLGDLGFS 262
+K +N+ ++ G +KL + G +
Sbjct: 127 LKPQNLLINRNGELKLANFGLA 148
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 190 IFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+F+ +EY LY+ I +E D+ F QIL A+ ++H + IIHRD+K N+F+
Sbjct: 90 LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
VK+GD G + + +
Sbjct: 150 DESRNVKIGDFGLAKNVHR 168
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 84 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 144 AHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 83 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 143 AHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 85 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 145 AHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 152 EDLEVKIGDFGLATKVE 168
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 114 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 174 EDLEVKIGDFGLATKVE 190
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 90 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 150 EDLEVKIGDFGLATKVE 166
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 78 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 138 AHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 152 EDLEVKIGDFGLATKVE 168
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 96 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 156 EDLEVKIGDFGLATKVE 172
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 93 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 153 AHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+V+E L L+E +A+ Y QI+ ++LH +IHRD+K N+FL+
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 250 VRGIVKLGDLGFSTKLQ 266
VK+GD G +TK++
Sbjct: 176 EDLEVKIGDFGLATKVE 192
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 11 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + L
Sbjct: 67 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGS------------------------LLDRL 101
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 102 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 140
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQ 163
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 11 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + L
Sbjct: 67 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGS------------------------LLDRL 101
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 102 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 140
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQ 163
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 11 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + L
Sbjct: 67 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGS------------------------LLDRL 101
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 102 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 140
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQ 163
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 15 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 70
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + L
Sbjct: 71 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGS------------------------LLDRL 105
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 106 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 144
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQ 167
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT-PKARKMLSREIVSME 124
+L +LG G+F V+ E P T +A+K L L+ P+A RE+ +M
Sbjct: 21 RLLEKLGDGSFGVVRRG--EWDAPSGKTV--SVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 125 SVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
S+ H N+IRLY V+ T + +V E A G L + L
Sbjct: 77 SLDHRNLIRLYGVVLT-PPMKMVTELAPLGS------------------------LLDRL 111
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
FL+ G LS Y +Q+ + +L + IHRD+ A
Sbjct: 112 RKHQGHFLL----------------GTLSR-----YAVQVAEGMGYLESKRFIHRDLAAR 150
Query: 245 NVFLSVRGIVKLGDLGFSTKLQQ 267
N+ L+ R +VK+GD G L Q
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQ 173
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 190 IFLVVEYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
+ +++E GGEL+++I G +E +A I +A++ LH +I HRD+K EN+
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 248 LSVR---GIVKLGDLGFSTKLQQ 267
+ + ++KL D GF+ + Q
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQ 183
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 190 IFLVVEYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
+ +++E GGEL+++I G +E +A I +A++ LH +I HRD+K EN+
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 248 LSVR---GIVKLGDLGFSTKLQQ 267
+ + ++KL D GF+ + Q
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQ 164
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKH 230
K + ILL+ T ++ +V ++ G LY+ + +E + Q + +
Sbjct: 76 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 231 LHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
LH + IIHRD+K+ N+FL VK+GD G +T+
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 60/216 (27%)
Query: 55 ETSLGKRVALYKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAK 107
+ ++G Y++Q E +G G F V I+ + LA+ I
Sbjct: 23 QGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKN 76
Query: 108 LTPKA-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRL 166
T + R+ +E ++M HP+I++L V+ T +++++E + GEL +
Sbjct: 77 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS-------- 127
Query: 167 SEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILS 226
FLQ+ Y + +L + I +Y Q+ +
Sbjct: 128 --------FLQVRKYSL-----------------DLASLI------------LYAYQLST 150
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
A+ +L + +HRDI A NV +S VKLGD G S
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 90
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 134
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 135 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 165
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 166 NSRGEIKLCDFGVSGQL 182
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 60/214 (28%)
Query: 57 SLGKRVALYKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
++G Y++Q E +G G F V I+ + LA+ I T
Sbjct: 2 AMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKNCT 55
Query: 110 PKA-RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
+ R+ +E ++M HP+I++L V+ T +++++E + GEL +
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS---------- 104
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
FLQ+ Y + +L + I +Y Q+ +A+
Sbjct: 105 ------FLQVRKYSL-----------------DLASLI------------LYAYQLSTAL 129
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+L + +HRDI A NV +S VKLGD G S
Sbjct: 130 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 180 LYEVLETFGKIFLVV-EYASGGELYNKITTEG--RLSEDDAKIYFLQILSAVKHLHDRDI 236
+YE L K L+V E GGEL+++I G +E +A I A+++LH +I
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 237 IHRDIKAENVFLSVR---GIVKLGDLGFS 262
HRD+K EN+ + + I+KL D GF+
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++E +A+ + Q + V++LH+ +IHRD+K N+FL+ VK+GD G +TK++
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++E +A+ + Q + V++LH+ +IHRD+K N+FL+ VK+GD G +TK++
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 125
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 169
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 170 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 200
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 201 NSRGEIKLCDFGVSGQL 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++E +A+ + Q + V++LH+ +IHRD+K N+FL+ VK+GD G +TK++
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 82
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 126
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 127 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 157
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 158 NSRGEIKLCDFGVSGQL 174
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 46/165 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK +++ P +K+ REI ++ + HPN++ L EV ++ LV EY
Sbjct: 31 VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD----- 85
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ VL + Y G + E
Sbjct: 86 -----------------------HTVLHELDR------YQRG------------VPEHLV 104
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
K Q L AV H + IHRD+K EN+ ++ ++KL D GF+
Sbjct: 105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
++E +A+ + Q + V++LH+ +IHRD+K N+FL+ VK+GD G +TK++
Sbjct: 123 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 177
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDI 236
LL ++E G +++V EY + G L + + + GR L D + L + A+++L +
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+ A NV +S + K+ D G +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 49/158 (31%)
Query: 113 RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK 172
RK E+ + V+HPNI++LY + LV+EYA GG LYN +
Sbjct: 46 RKAFIVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVL------------ 91
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLH 232
G E T +S + LQ V +LH
Sbjct: 92 -------------------------HGAEPLPYYTAAHAMS------WCLQCSQGVAYLH 120
Query: 233 D---RDIIHRDIKAENVFLSVRGIV-KLGDLGFSTKLQ 266
+ +IHRD+K N+ L G V K+ D G + +Q
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 158
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKH 230
K + ILL+ T ++ +V ++ G LY+ + +E + Q + +
Sbjct: 76 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 231 LHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
LH + IIHRD+K+ N+FL VK+GD G +T+
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDI 236
+ L + E G ++L E G L G L E Y L A+ HLH + +
Sbjct: 120 VRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+H D+K N+FL RG KLGD G +L
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVEL 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKH 230
K + ILL+ T ++ +V ++ G LY+ + +E + Q + +
Sbjct: 64 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 231 LHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
LH + IIHRD+K+ N+FL VK+GD G +T
Sbjct: 124 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 156
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 49/158 (31%)
Query: 113 RKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK 172
RK E+ + V+HPNI++LY + LV+EYA GG LYN +
Sbjct: 45 RKAFIVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVL------------ 90
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLH 232
G E T +S + LQ V +LH
Sbjct: 91 -------------------------HGAEPLPYYTAAHAMS------WCLQCSQGVAYLH 119
Query: 233 D---RDIIHRDIKAENVFLSVRGIV-KLGDLGFSTKLQ 266
+ +IHRD+K N+ L G V K+ D G + +Q
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 66
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 110
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 111 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 141
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 142 NSRGEIKLCDFGVSGQL 158
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 63
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 107
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 108 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 138
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 139 NSRGEIKLCDFGVSGQL 155
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 63
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 107
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 108 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 138
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 139 NSRGEIKLCDFGVSGQL 155
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 63
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 107
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 108 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 138
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 139 NSRGEIKLCDFGVSGQL 155
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDI 236
LL ++E G +++V EY + G L + + + GR L D + L + A+++L +
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 123
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+ A NV +S + K+ D G +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 63
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 107
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 108 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 138
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 139 NSRGEIKLCDFGVSGQL 155
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G
Sbjct: 154 SNLAVNEDSELKILDFGLC 172
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H+ ++ + +L IK P R + RE+ + +
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 63
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + GR+ E QIL G
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QIL--------G 107
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V ++ L+ ++ H I+HRD+K N+ +
Sbjct: 108 KVSIAV---------------------------IKGLTYLREKH--KIMHRDVKPSNILV 138
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 139 NSRGEIKLCDFGVSGQL 155
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDI 236
LL ++E G +++V EY + G L + + + GR L D + L + A+++L +
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 129
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+ A NV +S + K+ D G +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 179 LLYEVLETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDI 236
LL ++E G +++V EY + G L + + + GR L D + L + A+++L +
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+ A NV +S + K+ D G +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 92 LEEFNDVYLVT-HLMGADL-NNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 150 SNLAVNEDCELKILDFGLA 168
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 53/197 (26%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
+ELG GN V H I+ + +L IK P R + RE+ + +
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK--------PAIRNQIIRELQVLHECNS 73
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
P I+ Y + G+I + +E+ GG L + R+ E E G
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----------------EILG 117
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
K+ + V L+ L+ ++ H I+HRD+K N+ +
Sbjct: 118 KVSIAV---------------------------LRGLAYLREKH--QIMHRDVKPSNILV 148
Query: 249 SVRGIVKLGDLGFSTKL 265
+ RG +KL D G S +L
Sbjct: 149 NSRGEIKLCDFGVSGQL 165
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF--------------------------- 86
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
L++ L+TF + +G L K Y Q+L + H ++
Sbjct: 87 --LHQDLKTF----MDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 190 IFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+F+ EY LY+ I +E D+ F QIL A+ ++H + IIHR++K N+F+
Sbjct: 90 LFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI 149
Query: 249 SVRGIVKLGDLGFSTKLQQ 267
VK+GD G + + +
Sbjct: 150 DESRNVKIGDFGLAKNVHR 168
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDXELKILDFGLA 172
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + LA+ I T + R+
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 103
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ Y + +L + I +Y Q+ +A+ +L +
Sbjct: 104 QVRKYSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 134
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + LA+ I T + R+
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKNCTSDSVREKF 55
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 98
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ Y + +L + I +Y Q+ +A+ +L +
Sbjct: 99 QVRKYSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 129
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 56/197 (28%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L +G G+F TV + +A+KIL TP+ + E+ +
Sbjct: 40 LSTRIGSGSFGTVYKG----------KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H NI+ L+ T + +V ++ G LY + V ET
Sbjct: 90 RHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHL---------------------HVQET 127
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
++F +++ A Q + +LH ++IIHRD+K+ N+
Sbjct: 128 KFQMFQLIDIAR------------------------QTAQGMDYLHAKNIIHRDMKSNNI 163
Query: 247 FLSVRGIVKLGDLGFST 263
FL VK+GD G +T
Sbjct: 164 FLHEGLTVKIGDFGLAT 180
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 92
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 93 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 127
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K EN+ ++ G +KL D G +
Sbjct: 128 HRDLKPENLLINTEGAIKLADFGLA 152
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + LA+ I T + R+
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 104
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ Y + +L + I +Y Q+ +A+ +L +
Sbjct: 105 QVRKYSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 135
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 91
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 92 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 126
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K EN+ ++ G +KL D G +
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLA 151
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 102 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 160 SNLAVNEDSELKILDFGLA 178
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 125 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 182
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 183 SNLAVNEDCELKILDFGLA 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 190 IFLVVEYASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+++V+EY G + + I + L+ED+ L +++LH IHRDIKA N+ L
Sbjct: 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158
Query: 249 SVRGIVKLGDLGFSTKL 265
+ G KL D G + +L
Sbjct: 159 NTEGHAKLADFGVAGQL 175
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 98 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 156 SNLAVNEDSELKILDFGLA 174
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + LA+ I T + R+
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPALAVAIKTCKNCTSDSVREKF 58
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 101
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ Y + +L + I +Y Q+ +A+ +L +
Sbjct: 102 QVRKYSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 132
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 103 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 161 SNLAVNEDCELKILDFGLA 179
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 103 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 161 SNLAVNEDCELKILDFGLA 179
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 103 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 161 SNLAVNEDCELKILDFGLA 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 101 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 159 SNLAVNEDCELKILDFGLA 177
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 95 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 152
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 153 SNLAVNEDCELKILDFGLA 171
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 103 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 161 SNLAVNEDCELKILDFGLA 179
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 93 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 151 SNLAVNEDCELKILDFGLA 169
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 106 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 163
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 164 SNLAVNEDCELKILDFGLA 182
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 98 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 156 SNLAVNEDCELKILDFGLA 174
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 92 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 150 SNLAVNEDCELKILDFGLA 168
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 102 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 160 SNLAVNEDCELKILDFGLA 178
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 102 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 160 SNLAVNEDCELKILDFGLA 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 101 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 159 SNLAVNEDCELKILDFGLA 177
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 92 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 150 SNLAVNEDCELKILDFGLA 168
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 102 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 160 SNLAVNEDCELKILDFGLA 178
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 119 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 176
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 177 SNLAVNEDCELKILDFGLA 195
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 98 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 156 SNLAVNEDCELKILDFGLA 174
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 93 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 151 SNLAVNEDCELKILDFGLA 169
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDFGLA 172
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 92 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 150 SNLAVNEDCELKILDFGLA 168
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 107 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 165 SNLAVNEDCELKILDFGLA 183
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 94 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 151
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 152 SNLAVNEDCELKILDFGLA 170
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 98 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 156 SNLAVNEDCELKILDFGLA 174
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 108 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 166 SNLAVNEDCELKILDFGLA 184
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 108 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 166 SNLAVNEDCELKILDFGLA 184
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 108 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 166 SNLAVNEDCELKILDFGLA 184
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 101 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 159 SNLAVNEDXELKILDFGLA 177
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 119 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 176
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 177 SNLAVNEDCELKILDFGLA 195
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 101 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 159 SNLAVNEDXELKILDFGLA 177
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 116 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 174 SNLAVNEDCELKILDFGLA 192
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 116 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 174 SNLAVNEDCELKILDFGLA 192
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 115 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 173 SNLAVNEDCELKILDFGLA 191
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 116 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 174 SNLAVNEDCELKILDFGLA 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 115 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 173 SNLAVNEDCELKILDFGLA 191
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 107 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 165 SNLAVNEDXELKILDFGLA 183
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLSFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 83
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E L K F+ +G L K Y Q+L + H ++
Sbjct: 84 ---FEFLSMDLKKFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K EN+ ++ G +KL D G +
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLA 153
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 81
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E L K F+ +G L K Y Q+L + H ++
Sbjct: 82 ---FEFLSMDLKKFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 126
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K EN+ ++ G +KL D G +
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLA 151
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + +A+ I T + R+
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPAMAVAIKTCKNCTSDSVREKF 58
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 101
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ Y + +L + I +Y Q+ +A+ +L +
Sbjct: 102 QVRKYSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 132
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 91
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 92 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 126
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 89
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 90 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 93
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 94 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 92
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 93 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 127
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 89
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 90 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 89
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 90 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 89
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 90 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 89
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 90 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGF 261
N L+V +L LGF
Sbjct: 154 SN--LAVNEDCELKILGF 169
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDAGLA 172
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 97
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 98 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 132
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 80
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E L K F+ +G L K Y Q+L + H ++
Sbjct: 81 ---FEFLHQDLKDFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K EN+ ++ G +KL D G +
Sbjct: 126 HRDLKPENLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 90
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 91 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 125
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 93
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 94 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 91
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 92 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 126
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 91
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 92 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 126
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 94
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 95 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 129
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDYGLA 172
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 97
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 98 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 132
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 92
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 93 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 127
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV E+ L +D K
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------------LHQDLKK----- 94
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
F+ +G L K Y Q+L + H ++
Sbjct: 95 -------------FMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 129
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKI--YFLQILSAVKHLHDRDIIHRDIKA 243
T +++++E + GEL + + + S D A + Y Q+ +A+ +L + +HRDI A
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
NV +S VKLGD G S
Sbjct: 140 RNVLVSATDCVKLGDFGLS 158
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 13 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 66
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS G L
Sbjct: 67 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE-- 123
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+LQ E G +EY+ YN E +LS D
Sbjct: 124 --------------YLQ-----AREPPG-----LEYS-----YNPSHNPEEQLSSKDLVS 154
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 17 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 76
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 77 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 136
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 137 GVVKVSDFGLS 147
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 49 DKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
D KW+ K + L K LG G F V A ++ Y + +A+K+L +
Sbjct: 15 DPKWEFPR---KNLVLGK---TLGEGEFGKVVKAT-AFHLKGRAGYTT-VAVKMLKENAS 66
Query: 109 TPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
+ R +LS E ++ V+HP++I+LY G + L+VEYA G L G L E
Sbjct: 67 PSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
G +L + + E L+ D + QI +
Sbjct: 120 S---------------RKVGPGYLGSGGSRNSSSLDH-PDERALTMGDLISFAWQISQGM 163
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++L + ++HRD+ A N+ ++ +K+ D G S
Sbjct: 164 QYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+F+VV+ GG+L + E+ K++ +++ A+ +L ++ IIHRD+K +N+ L
Sbjct: 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
Query: 250 VRGIVKLGDLGFSTKL 265
G V + D + L
Sbjct: 150 EHGHVHITDFNIAAML 165
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDRGLA 172
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 21 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 80
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 81 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 140
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 141 GVVKVSDFGLS 151
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 22 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 82 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 141
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 142 GVVKVSDFGLS 152
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 22 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 82 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 141
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 142 GVVKVSDFGLS 152
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + +A+ I T + R+
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 481
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ + + +L + I +Y Q+ +A+ +L +
Sbjct: 482 QVRKFSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 512
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ E F +++++ E +L+ I+T+ LS+D + + Q L AVK LH ++IHRD+
Sbjct: 81 DSFENFNEVYIIQELMQT-DLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ ++ +K+ D G +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLA 159
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ E F +++++ E +L+ I+T+ LS+D + + Q L AVK LH ++IHRD+
Sbjct: 81 DSFENFNEVYIIQELMQT-DLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ ++ +K+ D G +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLA 159
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ E F +++++ E +L+ I+T+ LS+D + + Q L AVK LH ++IHRD+
Sbjct: 81 DSFENFNEVYIIQELMQT-DLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ ++ +K+ D G +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLA 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 37 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 156
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 157 GVVKVSDFGLS 167
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKI--YFLQILSAVKHLHDRDIIHRDIKA 243
T +++++E + GEL + + + S D A + Y Q+ +A+ +L + +HRDI A
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 139
Query: 244 ENVFLSVRGIVKLGDLGFS 262
NV +S VKLGD G S
Sbjct: 140 RNVLVSSNDCVKLGDFGLS 158
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 37 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 156
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 157 GVVKVSDFGLS 167
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 67 LQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
L LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIHI 88
Query: 126 VHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
HH N++ L + G + ++VE+ G L + ++ + + Y+
Sbjct: 89 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKTP 137
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E K FL +E+ Y Q+ ++ L R IHRD+ A
Sbjct: 138 EDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ LS + +VK+ D G +
Sbjct: 178 NILLSEKNVVKICDFGLA 195
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 49 DKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
D KW+ K + L K LG G F V A ++ Y + +A+K+L +
Sbjct: 15 DPKWEFPR---KNLVLGK---TLGEGEFGKVVKAT-AFHLKGRAGYTT-VAVKMLKENAS 66
Query: 109 TPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
+ R +LS E ++ V+HP++I+LY G + L+VEYA G L G L E
Sbjct: 67 PSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
G +L + + E L+ D + QI +
Sbjct: 120 S---------------RKVGPGYLGSGGSRNSSSLDH-PDERALTMGDLISFAWQISQGM 163
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++L + ++HRD+ A N+ ++ +K+ D G S
Sbjct: 164 QYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 60/206 (29%)
Query: 65 YKLQNE-------LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKA-RKML 116
Y++Q E +G G F V I+ + +A+ I T + R+
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIY------MSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+E ++M HP+I++L V+ T +++++E + GEL + FL
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS----------------FL 481
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
Q+ + + +L + I +Y Q+ +A+ +L +
Sbjct: 482 QVRKFSL-----------------DLASLI------------LYAYQLSTALAYLESKRF 512
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRDI A NV +S VKLGD G S
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 49 DKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKL 108
D KW+ K + L K LG G F V A ++ Y + +A+K+L +
Sbjct: 15 DPKWEFPR---KNLVLGK---TLGEGEFGKVVKAT-AFHLKGRAGYTT-VAVKMLKENAS 66
Query: 109 TPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSE 168
+ R +LS E ++ V+HP++I+LY G + L+VEYA G L G L E
Sbjct: 67 PSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 169 DDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
G +L + + E L+ D + QI +
Sbjct: 120 S---------------RKVGPGYLGSGGSRNSSSLDH-PDERALTMGDLISFAWQISQGM 163
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++L + ++HRD+ A N+ ++ +K+ D G S
Sbjct: 164 QYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
I+ +E ++LV + G +LY + T+ LS D + QIL +K++H ++
Sbjct: 108 DIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANV 165
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+K N+ L+ +K+ D G +
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLA 191
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 145 FLVVEYASGGELYN---KITTEGRLSEDD----AKIYF-----LQILLYEVLETFGKIFL 192
F VV+Y Y+ K+ EG +SED+ AK+ + LY V IF+
Sbjct: 28 FGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 87
Query: 193 VVEYASGGELYNKI-TTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR 251
+ EY + G L N + R + A+++L + +HRD+ A N ++ +
Sbjct: 88 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 147
Query: 252 GIVKLGDLGFS 262
G+VK+ D G S
Sbjct: 148 GVVKVSDFGLS 158
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N + + +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ ++ +K+ D G +
Sbjct: 154 SNLAVNEDCELKILDGGLA 172
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 83
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E L K F+ +G L K Y Q+L + H ++
Sbjct: 84 ---FEFLSMDLKDFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 82
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E L K F+ +G L K Y Q+L + H ++
Sbjct: 83 ---FEFLSMDLKDFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 127
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 52/196 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF +V+ ++ + + +AIK+L + +M+ RE M + +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQI-----DVAIKVLKQGTEKADTEEMM-REAQIMHQLDNP 70
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+RL V + + LV+E A GG L+ + G+ E
Sbjct: 71 YIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLV--GKREE--------------------- 106
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+ ++ EL ++++ +K+L +++ +HRD+ A NV L
Sbjct: 107 ----IPVSNVAELLHQVSM------------------GMKYLEEKNFVHRDLAARNVLLV 144
Query: 250 VRGIVKLGDLGFSTKL 265
R K+ D G S L
Sbjct: 145 NRHYAKISDFGLSKAL 160
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNK---ITTEGRLSE--DDAKIYFLQILS 226
K + ILL+ T ++ +V ++ G LY+ I T+ + + D A+ Q
Sbjct: 60 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQ 115
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
+ +LH + IIHRD+K+ N+FL VK+GD G +T
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
L + +LH ++IHRD+KA N+ LS G+VKLGD G ++
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIY----FLQILSAVKHLHDRDIIHRDIKAEN 245
+F+ +E+ G L I E R E K+ F QI V ++H + +IHRD+K N
Sbjct: 109 LFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 246 VFLSVRGIVKLGDLGFSTKLQQ 267
+FL VK+GD G T L+
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKN 188
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 35/199 (17%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 32 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 88
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L +T R ++ Y E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----STYLRSKRNEFVPY------KEA 138
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
E K FL +E+ Y Q+ ++ L R IHRD+ A
Sbjct: 139 PEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLAA 178
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ LS + +VK+ D G +
Sbjct: 179 RNILLSEKNVVKICDFGLA 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 225 LSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
L + +LH ++IHRD+KA N+ LS G+VKLGD G ++
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 56/194 (28%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 36 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 86 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 123
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 124 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 159
Query: 251 RGIVKLGDLGFSTK 264
VK+GD G +T+
Sbjct: 160 DLTVKIGDFGLATE 173
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 56/194 (28%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 44 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 94 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 131
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 132 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
Query: 251 RGIVKLGDLGFSTK 264
VK+GD G +T+
Sbjct: 168 DLTVKIGDFGLATE 181
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 56/194 (28%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 16 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 66 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 103
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 104 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
Query: 251 RGIVKLGDLGFSTK 264
VK+GD G +T+
Sbjct: 140 DLTVKIGDFGLATE 153
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNK---ITTEGRLSE--DDAKIYFLQILS 226
K + ILL+ T ++ +V ++ G LY+ I T+ + + D A+ Q
Sbjct: 62 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQ 117
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
+ +LH + IIHRD+K+ N+FL VK+GD G +T
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 154
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNK---ITTEGRLSE--DDAKIYFLQILS 226
K + ILL+ T ++ +V ++ G LY+ I T+ + + D A+ Q
Sbjct: 60 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQ 115
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFST 263
+ +LH + IIHRD+K+ N+FL VK+GD G +T
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 56/193 (29%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 43 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 93 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 130
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 131 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 166
Query: 251 RGIVKLGDLGFST 263
VK+GD G +T
Sbjct: 167 DLTVKIGDFGLAT 179
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 56/193 (29%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 44 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 94 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 131
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 132 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
Query: 251 RGIVKLGDLGFST 263
VK+GD G +T
Sbjct: 168 DLTVKIGDFGLAT 180
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 53/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L ++GRGNF E++ L + +A+K + L P + +E ++
Sbjct: 118 LGEQIGRGNFG-------EVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQY 169
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPNI+RL V I++V+E GG+ + TEG A++ +L
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQ------ 217
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+V + A+G +++L + IHRD+ A N
Sbjct: 218 -----MVGDAAAG----------------------------MEYLESKCCIHRDLAARNC 244
Query: 247 FLSVRGIVKLGDLGFS 262
++ + ++K+ D G S
Sbjct: 245 LVTEKNVLKISDFGMS 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 56/193 (29%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 21 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 71 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 108
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 109 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
Query: 251 RGIVKLGDLGFST 263
VK+GD G +T
Sbjct: 145 DLTVKIGDFGLAT 157
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 53/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L ++GRGNF E++ L + +A+K + L P + +E ++
Sbjct: 118 LGEQIGRGNFG-------EVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQY 169
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPNI+RL V I++V+E GG+ + TEG A++ +L
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQ------ 217
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+V + A+G +++L + IHRD+ A N
Sbjct: 218 -----MVGDAAAG----------------------------MEYLESKCCIHRDLAARNC 244
Query: 247 FLSVRGIVKLGDLGFS 262
++ + ++K+ D G S
Sbjct: 245 LVTEKNVLKISDFGMS 260
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L + ++ + + Y+V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKV 126
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 127 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 166
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 167 ARNILLSEKNVVKICDFGLA 186
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 56/193 (29%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
+G G+F TV + +A+K+L+ TP+ + E+ + H N
Sbjct: 21 IGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
I+ L+ T ++ +V ++ G LY+ + ++ET ++
Sbjct: 71 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHL---------------------HIIETKFEM 108
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+++ A Q + +LH + IIHRD+K+ N+FL
Sbjct: 109 IKLIDIAR------------------------QTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
Query: 251 RGIVKLGDLGFST 263
VK+GD G +T
Sbjct: 145 DLTVKIGDFGLAT 157
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L + ++ + + Y+V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKV 135
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 136 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 175
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 176 ARNILLSEKNVVKICDFGLA 195
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 123
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L + ++ + + Y+V
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKV 172
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 173 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 212
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 213 ARNILLSEKNVVKICDFGLA 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L + ++ + + Y+V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKV 135
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 136 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 175
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 176 ARNILLSEKNVVKICDFGLA 195
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 66 KLQNELGRGNFS-TVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V+ + I C + A+K+L + + + +++ +
Sbjct: 30 KLGKSLGRGAFGKVVQASAFGIKKSPTCRTV---AVKMLKEGATASEYKALMTELKILTH 86
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLS--EDDAKIYF--LQIL 179
HH N++ L + G + ++VEY G L N + ++ L DA ++ +
Sbjct: 87 IGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEK 146
Query: 180 LYEVLETFGKIFL-----VVEYASGGELYNKITTEGRLSED------------DAKIYFL 222
+ LE K L +AS G +K ++ ED D Y
Sbjct: 147 MEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSF 206
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ ++ L R IHRD+ A N+ LS +VK+ D G +
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++VE+ G L + ++ + + Y+V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKV 135
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 136 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 175
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 176 ARNILLSEKNVVKICDFGLA 195
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 79
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E + K F+ +G L K Y Q+L + H ++
Sbjct: 80 ---FEHVHQDLKTFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 124
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 13 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 66
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 67 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 117
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ LE Y+ YN E +LS D
Sbjct: 118 --KGNLRE------YLQARRPPGLE----------YS-----YNPSHNPEEQLSSKDLVS 154
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 5 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 58
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 59 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 109
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ LE Y+ YN E +LS D
Sbjct: 110 --KGNLRE------YLQARRPPGLE----------YS-----YNPSHNPEEQLSSKDLVS 146
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 13 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 66
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 67 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 117
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ LE YN E +LS D
Sbjct: 118 --KGNLRE------YLQARRPPGLEY---------------CYNPSHNPEEQLSSKDLVS 154
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 40/220 (18%)
Query: 45 QLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILD 104
+L D +W+ R+ L K LG G F V +A ++ +A+K+L
Sbjct: 1 ELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML- 53
Query: 105 KAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTE 163
K+ T K L E+ M+ + H NII L G ++++VEYAS +
Sbjct: 54 KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----------K 103
Query: 164 GRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKIYFL 222
G L E +LQ LE YN E +LS D
Sbjct: 104 GNLRE------YLQARRPPGLEY---------------CYNPSHNPEEQLSSKDLVSCAY 142
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 6 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 59
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 60 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 110
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ + +EY+ YN E +LS D
Sbjct: 111 --KGNLRE------YLQ----------ARRPPGLEYS-----YNPSHNPEEQLSSKDLVS 147
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV + G +L N I +L++D + QIL +K++H DIIHRD+K
Sbjct: 96 LEEFNDVYLVT-HLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 244 ENVFLSVRGIVKLGDL 259
N+ ++ +K+ D
Sbjct: 154 SNLAVNEDCELKILDF 169
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 2 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 55
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 56 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 106
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ LE Y+ YN E +LS D
Sbjct: 107 --KGNLRE------YLQARRPPGLE----------YS-----YNPSHNPEEQLSSKDLVS 143
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 54 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 107
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 108 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 158
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKI-TTEGRLSEDDAKI 219
+G L E +LQ LE Y+ YN E +LS D
Sbjct: 159 --KGNLRE------YLQARRPPGLE----------YS-----YNPSHNPEEQLSSKDLVS 195
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 45/145 (31%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ ++HPNI++L +V+ T K++LV
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLV------------------------------ 83
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+E ++ K F+ +G L K Y Q+L + H ++
Sbjct: 84 ---FEHVDQDLKKFMDASALTGIPL------------PLIKSYLFQLLQGLAFCHSHRVL 128
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K +N+ ++ G +KL D G +
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 30/136 (22%)
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HHPNII L E G ++L +EYA G L + + L D A
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA--------------- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
F + +T LS + + + +L + IHRD+ A N+
Sbjct: 119 ----FAIAN-----------STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 163
Query: 247 FLSVRGIVKLGDLGFS 262
+ + K+ D G S
Sbjct: 164 LVGENYVAKIADFGLS 179
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEG-RLSEDDAKIYFLQILSAVKHLHDRDIIH 238
L+E E+ ++ ++ E+ SG +++ +I T L+E + Y Q+ A++ LH +I H
Sbjct: 66 LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 239 RDIKAENVFLSVR--GIVKLGDLGFSTKLQ 266
DI+ EN+ R +K+ + G + +L+
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 30/136 (22%)
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HHPNII L E G ++L +EYA G L + + L D A
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA--------------- 128
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
F + +T LS + + + +L + IHRD+ A N+
Sbjct: 129 ----FAIAN-----------STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 173
Query: 247 FLSVRGIVKLGDLGFS 262
+ + K+ D G S
Sbjct: 174 LVGENYVAKIADFGLS 189
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 178 ILLYEVLETFGKIFLVVEY--ASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDR 234
+ Y L G +++ +E S + Y ++ +G+ + ED + I+ A++HLH +
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 235 -DIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+IHRD+K NV ++ G VK+ D G S
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 47 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 104
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 105 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 126
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 127 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 64 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 121
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 122 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 143
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 144 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 74 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 131
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 132 -----DSFLRKHDAQFTVIQLV------------------------------GMLR---- 152
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 153 -----GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
ET + LV+ +GG+L I G+ E A Y +I ++ LH I++RD+K
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 243 AENVFLSVRGIVKLGDLGFS 262
EN+ L G +++ DLG +
Sbjct: 314 PENILLDDHGHIRISDLGLA 333
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 27/167 (16%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGEL 156
+A+K+L K K R+ L E+ M + H NI+ L G I+L+ EY G+L
Sbjct: 78 VAVKML-KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 157 YNKITTE-GRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 215
N + ++ + SED+ +EY + L + L+ +
Sbjct: 137 LNYLRSKREKFSEDE-----------------------IEYENQKRLEEEEDL-NVLTFE 172
Query: 216 DAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ ++ L + +HRD+ A NV ++ +VK+ D G +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 46/169 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T K R+ E M HPNII L V+ + ++ EY G L
Sbjct: 60 VAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL- 117
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L ++D + F I L +L G
Sbjct: 118 -----DAFLRKNDGR--FTVIQLVGMLRGIG----------------------------- 141
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 142 --------SGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRL-SEDDAKIYFLQILSAVKHLHDRDI 236
+ L++++ T + LV EY +L + G + + + K++ Q+L + + H + +
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121
Query: 237 IHRDIKAENVFLSVRGIVKLGDLGFS 262
+HRD+K +N+ ++ RG +KL D G +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLA 147
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
+LG G+F V + Y P +A+K L KA P+ R +EI + +++H
Sbjct: 38 DLGEGHFGKVSLYC---YDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHE 93
Query: 130 NIIRLYEVLETFG--KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+II+ E G + LV+EY G L + + I Q+LL+
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFAQ---- 141
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
QI + +LH + IHRD+ A NV
Sbjct: 142 -----------------------------------QICEGMAYLHAQHYIHRDLAARNVL 166
Query: 248 LSVRGIVKLGDLGFSTKLQQ 267
L +VK+GD G + + +
Sbjct: 167 LDNDRLVKIGDFGLAKAVPE 186
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGR--LSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
ET + LV+ +GG+L I G+ E A Y +I ++ LH I++RD+K
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 243 AENVFLSVRGIVKLGDLGFSTKLQQ 267
EN+ L G +++ DLG + + +
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPE 338
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 152 TNAVKVMDFGIA 163
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 46/169 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T K R+ E M HPNII L V+ + ++ EY G L
Sbjct: 45 VAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL- 102
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L ++D + F I L +L G
Sbjct: 103 -----DAFLRKNDGR--FTVIQLVGMLRGIG----------------------------- 126
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 127 --------SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 167
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 152 TNAVKVMDFGIA 163
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 178 ILLYEVLETFGKIFLVVEY--ASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDR 234
+ Y L G +++ +E S + Y ++ +G+ + ED + I+ A++HLH +
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 235 -DIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+IHRD+K NV ++ G VK+ D G S
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 169 TNAVKVMDFGIA 180
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T K R+ E M HPNII L V+ + ++ EY G L
Sbjct: 39 VAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL- 96
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L ++D + F I L +L G
Sbjct: 97 -----DAFLRKNDGR--FTVIQLVGMLRGIG----------------------------- 120
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 121 --------SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 152 TNAVKVMDFGIA 163
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKI--------------YFLQILSAVKHLHD 233
G + ++ EY G+L N + + R+ E D + Q+ + L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS 182
Query: 234 RDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++ IHRD+ A NV L+ + K+GD G +
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++ E+ G L + ++ + + Y+V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-----------EFVPYKV 126
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 127 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 166
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 167 ARNILLSEKNVVKICDFGLA 186
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKI--------------YFLQILSAVKHLHD 233
G + ++ EY G+L N + + R+ E D + Q+ + L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182
Query: 234 RDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++ IHRD+ A NV L+ + K+GD G +
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++ E+ G L + ++ + + Y+V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-----------EFVPYKV 126
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 127 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 166
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 167 ARNILLSEKNVVKICDFGLA 186
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
HH N++ L + G + ++ E+ G L + ++ + + Y+V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-----------EFVPYKV 126
Query: 184 L-ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
E K FL +E+ Y Q+ ++ L R IHRD+
Sbjct: 127 APEDLYKDFLTLEHLI--------------------CYSFQVAKGMEFLASRKCIHRDLA 166
Query: 243 AENVFLSVRGIVKLGDLGFS 262
A N+ LS + +VK+ D G +
Sbjct: 167 ARNILLSEKNVVKICDFGLA 186
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 152 TNAVKVMDFGIA 163
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L + + TEG ++ A A+ H IIHRD+K N+ +S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 152 TNAVKVVDFGIA 163
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 188 GKIFLVVEYASGGELYN--KITTEGRLSEDDAKIYFL--------QILSAVKHLHDRDII 237
G + ++ EY G+L N + E L ++D + L Q+ + L ++ I
Sbjct: 115 GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 174
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+ A NV L+ + K+GD G +
Sbjct: 175 HRDVAARNVLLTNGHVAKIGDFGLA 199
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 60/217 (27%)
Query: 46 LQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDK 105
Q+ KW+ E R + ++++LG G + E+YV + Y +A+K L +
Sbjct: 21 FQSMDKWEME-----RTDI-TMKHKLGGGQYG-------EVYVGVWKKYSLTVAVKTLKE 67
Query: 106 AKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGR 165
+ + + L +E M+ + HPN+++L V ++V EY G L + + R
Sbjct: 68 DTM--EVEEFL-KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR 124
Query: 166 LSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL 225
E+ + +LLY QI
Sbjct: 125 --EEVTAV----VLLYMAT--------------------------------------QIS 140
Query: 226 SAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
SA+++L ++ IHRD+ A N + +VK+ D G S
Sbjct: 141 SAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 188 GKIFLVVEYASGGELYN--KITTEGRLSEDDAKIYFL--------QILSAVKHLHDRDII 237
G + ++ EY G+L N + E L ++D + L Q+ + L ++ I
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 182
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+ A NV L+ + K+GD G +
Sbjct: 183 HRDVAARNVLLTNGHVAKIGDFGLA 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 38/198 (19%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L+ ELG G F V +A E Y +A+K L L ARK RE + ++
Sbjct: 19 LKRELGEGAFGKVFLA--ECYNLSPTKDKMLVAVKALKDPTLA--ARKDFQREAELLTNL 74
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H +I++ Y V + +V EY G+L + G DA I ++ + +
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG----PDAMI----LVDGQPRQA 126
Query: 187 FGKIFL--VVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G++ L ++ AS QI S + +L + +HRD+
Sbjct: 127 KGELGLSQMLHIAS------------------------QIASGMVYLASQHFVHRDLATR 162
Query: 245 NVFLSVRGIVKLGDLGFS 262
N + +VK+GD G S
Sbjct: 163 NCLVGANLLVKIGDFGMS 180
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
++ +L D +W+ R+ L K LG G F V +A ++ +A+K
Sbjct: 13 SEYELPEDPRWELPRD---RLVLGK---PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 66
Query: 102 ILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
+L K+ T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 67 ML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-------- 117
Query: 161 TTEGRLSEDDAKIYFLQILLYEVLE-TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKI 219
+G L E +LQ LE +F E +LS D
Sbjct: 118 --KGNLRE------YLQARRPPGLEFSFNPSH---------------NPEEQLSSKDLVS 154
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 97 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 154 KPSNIVVKSDCTLKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDCTLKILDFGLA 173
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 89 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 145
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 146 KPSNIVVKSDCTLKILDFGLA 166
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
L+ K Y L L +++LH I+HRD+K N+ L G++KL D G +
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 90 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 147 KPSNIVVKSDCTLKILDFGLA 167
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 90 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 147 KPSNIVVKSDCTLKILDFGLA 167
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDCTLKILDFGLA 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 95 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 151
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 152 KPSNIVVKSDCTLKILDFGLA 172
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 134 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 191 KPSNIVVKSDCTLKILDFGLA 211
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 97 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 154 KPSNIVVKSDCTLKILDFGLA 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 52/196 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF +V+ ++ + + +AIK+L + +M+ RE M + +P
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQI-----DVAIKVLKQGTEKADTEEMM-REAQIMHQLDNP 396
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+RL V + + LV+E A GG L+ + G+ E
Sbjct: 397 YIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLV--GKREE--------------------- 432
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
+ ++ EL ++++ +K+L +++ +HR++ A NV L
Sbjct: 433 ----IPVSNVAELLHQVSM------------------GMKYLEEKNFVHRNLAARNVLLV 470
Query: 250 VRGIVKLGDLGFSTKL 265
R K+ D G S L
Sbjct: 471 NRHYAKISDFGLSKAL 486
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIY----FLQILSAVKHLHDRDIIHRDIKAEN 245
+F+ +E+ G L I E R E K+ F QI V ++H + +I+RD+K N
Sbjct: 95 LFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 246 VFLSVRGIVKLGDLGFSTKLQQ 267
+FL VK+GD G T L+
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKN 174
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G + L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 53/200 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
+LG G+F V + Y P +A+K L KA P+ R +EI + +++H
Sbjct: 21 DLGEGHFGKVSLYC---YDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHE 76
Query: 130 NIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+II+ E G+ + LV+EY G L + + I Q+LL+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFAQ---- 124
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
QI + +LH + IHR++ A NV
Sbjct: 125 -----------------------------------QICEGMAYLHSQHYIHRNLAARNVL 149
Query: 248 LSVRGIVKLGDLGFSTKLQQ 267
L +VK+GD G + + +
Sbjct: 150 LDNDRLVKIGDFGLAKAVPE 169
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 134 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 191 KPSNIVVKSDCTLKILDFGLA 211
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 59 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 113
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 161
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 30/136 (22%)
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HHPNII L E G ++L +EYA G L + + L D A
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA--------------- 125
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
F + +T LS + + + +L + IHR++ A N+
Sbjct: 126 ----FAIAN-----------STASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNI 170
Query: 247 FLSVRGIVKLGDLGFS 262
+ + K+ D G S
Sbjct: 171 LVGENYVAKIADFGLS 186
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LXQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 56 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 110
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 158
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYLVMELMDAN-LCQVIHME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 55 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 109
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 157
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 75 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 177
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 75 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 129
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 177
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V EY G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 89 KTLEEFQDVYLVMELMDAN-LXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 145
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 146 KPSNIVVKSDXTLKILDFGLA 166
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 16 KFLQQLGKGNFGSVEMCR---YDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 70
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + + +I +++L Y
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE------RIDHIKLLQYTS 124
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 125 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 145
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 146 RNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 12 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 66
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 116
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 117 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 141
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 142 RNILVENENRVKIGDFGLTKVLPQ 165
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 13 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 67
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 117
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 118 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 142
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 143 RNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+E F +++LV G +L N + ++ LS++ + Q+L +K++H IIHRD+K
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFSTK 264
NV ++ +++ D G + +
Sbjct: 160 SNVAVNEDSELRILDFGLARQ 180
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 11 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 65
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 115
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 116 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 140
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 141 RNILVENENRVKIGDFGLTKVLPQ 164
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 13 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 67
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 121
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 122 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 142
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 143 RNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 31 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 85
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 135
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 136 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 160
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 161 RNILVENENRVKIGDFGLTKVLPQ 184
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 44 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 98
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 152
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 153 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 173
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 174 RNILVENENRVKIGDFGLTKVLPQ 197
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 19 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 73
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 127
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 128 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 148
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 149 RNILVENENRVKIGDFGLTKVLPQ 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F ++LV+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 96 LEEFQDVYLVMELMDAN-LCQVIHME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 152
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 153 SNIVVKSDCTLKILDFGLA 171
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 20 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 74
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 128
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 129 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 149
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 150 RNILVENENRVKIGDFGLTKVLPQ 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 31 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 85
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 135
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 136 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 160
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 161 RNILVENENRVKIGDFGLTKVLPQ 184
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 113 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFG 171
Query: 261 FS 262
+
Sbjct: 172 LA 173
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 18 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 72
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 126
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 127 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 147
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 148 RNILVENENRVKIGDFGLTKVLPQ 171
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 13 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 67
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 121
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 122 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 142
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 143 RNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 16 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 70
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 124
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 125 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 145
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 146 RNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
+ LE F ++LV+E L I E L + Q+L +KHLH IIHRD+
Sbjct: 96 KTLEEFQDVYLVMELMDAN-LXQVIQME--LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ + +K+ D G +
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
IL LE +++V + +LY K+ +LS D + QIL +K++H +++
Sbjct: 109 ILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQILRGLKYIHSANVL 166
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+K N+ ++ +K+ D G +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLA 191
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 53/200 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
+LG G+F V + Y P +A+K L KA P+ R +EI + +++H
Sbjct: 21 DLGEGHFGKVSLYC---YDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHE 76
Query: 130 NIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+II+ E G+ + LV+EY G L + + I Q+LL+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFAQ---- 124
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
QI + +LH + IHR++ A NV
Sbjct: 125 -----------------------------------QICEGMAYLHAQHYIHRNLAARNVL 149
Query: 248 LSVRGIVKLGDLGFSTKLQQ 267
L +VK+GD G + + +
Sbjct: 150 LDNDRLVKIGDFGLAKAVPE 169
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 92 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 149
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 150 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 65 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 122
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 123 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 54/198 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++ ++G G+F TV A + S +A+KIL + + RE+ M+ +
Sbjct: 41 IKEKIGAGSFGTVHRAEW---------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPNI+ + + +V EY S G LY + G E L+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG---------------AREQLDE 136
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRD--IIHRDIKAE 244
++ + + A G + +LH+R+ I+HRD+K+
Sbjct: 137 RRRLSMAYDVAKG----------------------------MNYLHNRNPPIVHRDLKSP 168
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ + + VK+ D G S
Sbjct: 169 NLLVDKKYTVKVCDFGLS 186
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 73 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 130
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 37/196 (18%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L+ ELG G F V +A E Y LC + + + + ARK RE + ++
Sbjct: 17 LKRELGEGAFGKVFLA--ECYN--LCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H +I++ Y V + +V EY G+L + G DA +L+ E
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG----PDA------VLMAE---- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
TE L++ QI + + +L + +HRD+ N
Sbjct: 119 -----------------GNPPTE--LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNC 159
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+GD G S
Sbjct: 160 LVGENLLVKIGDFGMS 175
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 17 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 71
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLL---- 121
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+Y S QI +++L + IHRD+
Sbjct: 122 -----------QYTS------------------------QICKGMEYLGTKRYIHRDLAT 146
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 147 RNILVENENRVKIGDFGLTKVLPQ 170
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 68 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 125
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 126 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDR---DIIHRDIKAEN 245
+ LV+E+A GG L N++ + R+ D + +QI + +LHD IIHRD+K+ N
Sbjct: 80 NLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 246 VFLSVRGIVKLGDL 259
+ + + V+ GDL
Sbjct: 139 ILILQK--VENGDL 150
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 73 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 130
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 70 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 127
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 128 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L+ ELG G F V +A +P + +A+K L +A + AR+ RE + +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKEA--SESARQDFQREAELLTML 77
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H +I+R + V + +V EY G+L + + G DAK+
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG----PDAKLL------------ 121
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+GGE G L Q+ + + +L +HRD+ N
Sbjct: 122 -----------AGGE----DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 166
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+GD G S
Sbjct: 167 LVGQGLVVKIGDFGMS 182
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDATLKILDFGLA 173
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L+ ELG G F V +A +P + +A+K L +A + AR+ RE + +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKEA--SESARQDFQREAELLTML 71
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H +I+R + V + +V EY G+L + + G DAK+
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG----PDAKLL------------ 115
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+GGE G L Q+ + + +L +HRD+ N
Sbjct: 116 -----------AGGE----DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 160
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+GD G S
Sbjct: 161 LVGQGLVVKIGDFGMS 176
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 72 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 129
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 72 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 129
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 188 GKIFLVVEYASGGELYNKI----------------TTEGRLSEDDAKIYFLQILSAVKHL 231
G + ++ EY G+L N + E +LS D + Q+ + L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL 182
Query: 232 HDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++ IHRD+ A NV L+ + K+GD G +
Sbjct: 183 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 92 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 148
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 149 SNIVVKSDCTLKILDFGLA 167
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 103 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 160 SNIVVKSDCTLKILDFGLA 178
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
KL LGRG F V A + + +A+K+L + + R ++S + +
Sbjct: 32 KLGKPLGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 126 VHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVL 184
HH N++ L + G + ++VE+ G L + ++ + + Y+
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKP- 137
Query: 185 ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
E K FL +E+ Y Q+ ++ L R IHRD+ A
Sbjct: 138 EDLYKDFLTLEHLI--------------------XYSFQVAKGMEFLASRKXIHRDLAAR 177
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ LS + +VK+ D G +
Sbjct: 178 NILLSEKNVVKICDFGLA 195
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDATLKILDFGLA 173
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 111 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 261 FS 262
+
Sbjct: 170 LA 171
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 109 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 261 FS 262
+
Sbjct: 168 LA 169
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+ +LV E GG + + I +E +A + + SA+ LH++ I HRD+K EN+
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 249 ---SVRGIVKLGDLGFSTKLQ 266
+ VK+ D G + ++
Sbjct: 145 EHPNQVSPVKICDFGLGSGIK 165
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 113 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 261 FS 262
+
Sbjct: 172 LA 173
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 131 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 189
Query: 261 FS 262
+
Sbjct: 190 LA 191
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 113 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 261 FS 262
+
Sbjct: 172 LA 173
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 71 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 128
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
I F LQ+ +K+L + +HRD+ A N L + VK+ D G + +
Sbjct: 129 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 181
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 178 ILLYEVLETFGKIFLVVEY--ASGGELYNKITTEGR-LSEDDAKIYFLQILSAVKHLHDR 234
+ Y L G +++ E S + Y ++ +G+ + ED + I+ A++HLH +
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 235 -DIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+IHRD+K NV ++ G VK D G S
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+E F +++LV G +L N + + LS++ + Q+L +K++H IIHRD+K
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 244 ENVFLSVRGIVKLGDLGFSTK 264
NV ++ +++ D G + +
Sbjct: 160 SNVAVNEDSELRILDFGLARQ 180
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 109 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 261 FS 262
+
Sbjct: 168 LA 169
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 91 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 148
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K+L + +HRD+ A N L + VK+ D G +
Sbjct: 149 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 115 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 261 FS 262
+
Sbjct: 174 LA 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 116 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 261 FS 262
+
Sbjct: 175 LA 176
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 117 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 175
Query: 261 FS 262
+
Sbjct: 176 LA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 108 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 166
Query: 261 FS 262
+
Sbjct: 167 LA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 115 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 261 FS 262
+
Sbjct: 174 LA 175
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 115 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 261 FS 262
+
Sbjct: 174 LA 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 116 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 261 FS 262
+
Sbjct: 175 LA 176
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
+E F +++LV G +L N + + LS++ + Q+L +K++H IIHRD+K
Sbjct: 94 IEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 151
Query: 244 ENVFLSVRGIVKLGDLGFSTK 264
NV ++ +++ D G + +
Sbjct: 152 SNVAVNEDCELRILDFGLARQ 172
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 100 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 156
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 157 SNIVVKSDCTLKILDFGLA 175
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 99 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 155
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 156 SNIVVKSDCTLKILDFGLA 174
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 103 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 205
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 103 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 205
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 119 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 177
Query: 261 FS 262
+
Sbjct: 178 LA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 111 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 261 FS 262
+
Sbjct: 170 LA 171
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N+I +L + KI +++ YE+ + + I++V+E +L + + + + +
Sbjct: 103 NEIAYLNKLQQHSDKI--IRLYDYEITDQY--IYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
K Y+ +L AV +H I+H D+K N FL V G++KL D G + ++Q
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQ 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L+ ELG G F V +A +P + +A+K L +A + AR+ RE + +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKEA--SESARQDFQREAELLTML 100
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
H +I+R + V + +V EY G+L + + G DAK+
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG----PDAKLL------------ 144
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+GGE G L Q+ + + +L +HRD+ N
Sbjct: 145 -----------AGGE----DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 189
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+GD G S
Sbjct: 190 LVGQGLVVKIGDFGMS 205
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 111 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 261 FS 262
+
Sbjct: 170 LA 171
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 159 KITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK 218
+IT RL + D I +++ E L F ++++V+E A +L T L+E K
Sbjct: 77 EITILNRL-KSDYIIRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVK 134
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+L K +H+ IIHRD+K N L+ VK+ D G +
Sbjct: 135 TILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
F +++V++ +L+ I + L+ + + + Q+L +K++H +IHRD+K N+
Sbjct: 131 FKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 189
Query: 247 FLSVRGIVKLGDLGFSTKL 265
++ +K+GD G + L
Sbjct: 190 LVNENCELKIGDFGMARGL 208
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 111 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 261 FS 262
+
Sbjct: 170 LA 171
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
F +++V++ +L+ I + L+ + + + Q+L +K++H +IHRD+K N+
Sbjct: 132 FKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 190
Query: 247 FLSVRGIVKLGDLGFSTKL 265
++ +K+GD G + L
Sbjct: 191 LVNENCELKIGDFGMARGL 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 115 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 261 FS 262
+
Sbjct: 174 LA 175
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDCTLKILDFGLA 173
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 115 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 261 FS 262
+
Sbjct: 174 LA 175
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 50/196 (25%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV I +VP T +AIKIL++ PKA E + M S+ HP+
Sbjct: 23 LGSGAFGTVYKGI---WVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPH 78
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
++RL L V + +L ++ G L E ++E + G
Sbjct: 79 LVRL-----------LGVCLSPTIQLVTQLMPHGCLLE----------YVHEHKDNIGSQ 117
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
L+ + +QI + +L +R ++HRD+ A NV +
Sbjct: 118 LLLN-------------------------WCVQIAKGMMYLEERRLVHRDLAARNVLVKS 152
Query: 251 RGIVKLGDLGFSTKLQ 266
VK+ D G + L+
Sbjct: 153 PNHVKITDFGLARLLE 168
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V E G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+Y LQI A+ +L + +HRDI N+ ++ VKLGD G S
Sbjct: 129 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+Y LQI A+ +L + +HRDI N+ ++ VKLGD G S
Sbjct: 117 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V E G L
Sbjct: 47 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL- 104
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 105 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 126
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 127 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 164 GRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 223
RL+ D + L I++ + +E F ++++V+E A + T L+E K
Sbjct: 107 NRLNHDHV-VKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYN 164
Query: 224 ILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+L VK++H I+HRD+K N ++ VK+ D G +
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL +V T S D +I L++E
Sbjct: 68 LEAFEHPNVVRLMDVCAT--------------------------SRTDREIKV--TLVFE 99
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ + +L +K G L + K Q L + LH I+HRD+K
Sbjct: 100 HVDQDLRTYL-----------DKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLK 147
Query: 243 AENVFLSVRGIVKLGDLGFS 262
EN+ ++ G VKL D G +
Sbjct: 148 PENILVTSGGTVKLADFGLA 167
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+Y LQI A+ +L + +HRDI N+ ++ VKLGD G S
Sbjct: 113 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 46/170 (27%)
Query: 97 YLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGEL 156
++AIK L K+ T K R+ E M HPN+I L V+ + ++ E+ G L
Sbjct: 63 FVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 157 YNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDD 216
+ L ++D + +Q++ G L
Sbjct: 122 ------DSFLRQNDGQFTVIQLV------------------------------GMLR--- 142
Query: 217 AKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
I + +K+L D + +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 143 ------GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 201 ELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLG 260
+LY + T+ LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G
Sbjct: 111 DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFG 169
Query: 261 FS 262
+
Sbjct: 170 LA 171
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL +V T S D +I L++E
Sbjct: 60 LEAFEHPNVVRLMDVCAT--------------------------SRTDREIKV--TLVFE 91
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ + +L +K G L + K Q L + LH I+HRD+K
Sbjct: 92 HVDQDLRTYL-----------DKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLK 139
Query: 243 AENVFLSVRGIVKLGDLGFS 262
EN+ ++ G VKL D G +
Sbjct: 140 PENILVTSGGTVKLADFGLA 159
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDATLKILDFGLA 173
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNIIRL V+ + +V E G L
Sbjct: 76 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + DA+ +Q++ G L
Sbjct: 134 -----DSFLRKHDAQFTVIQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDATLKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
LE F +++V+E L I E L + Q+L +KHLH IIHRD+K
Sbjct: 98 LEEFQDVYIVMELMDAN-LSQVIQME--LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKP 154
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ + +K+ D G +
Sbjct: 155 SNIVVKSDATLKILDFGLA 173
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 25/166 (15%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+A+K+L + ++S + H NI+ L G + ++ EY G+L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
N L + L A G + +GR E
Sbjct: 124 N------------------------FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRD 159
Query: 218 KIYFL-QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
++F Q+ + L ++ IHRD+ A NV L+ + K+GD G +
Sbjct: 160 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL +V T S D +I L++E
Sbjct: 60 LEAFEHPNVVRLMDVCAT--------------------------SRTDREIKV--TLVFE 91
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ + +L +K G L + K Q L + LH I+HRD+K
Sbjct: 92 HVDQDLRTYL-----------DKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLK 139
Query: 243 AENVFLSVRGIVKLGDLGFS 262
EN+ ++ G VKL D G +
Sbjct: 140 PENILVTSGGTVKLADFGLA 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL +V T S D +I L++E
Sbjct: 60 LEAFEHPNVVRLMDVCAT--------------------------SRTDREIKV--TLVFE 91
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ + +L +K G L + K Q L + LH I+HRD+K
Sbjct: 92 HVDQDLRTYL-----------DKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLK 139
Query: 243 AENVFLSVRGIVKLGDLGFS 262
EN+ ++ G VKL D G +
Sbjct: 140 PENILVTSGGTVKLADFGLA 159
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 71 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 128
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 129 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 73 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 130
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 131 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 78 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 135
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 136 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 50/196 (25%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV I +VP T +AIKIL++ PKA E + M S+ HP+
Sbjct: 46 LGSGAFGTVYKGI---WVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPH 101
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
++RL L V + +L ++ G L E ++E + G
Sbjct: 102 LVRL-----------LGVCLSPTIQLVTQLMPHGCLLE----------YVHEHKDNIGSQ 140
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
L+ + +QI + +L +R ++HRD+ A NV +
Sbjct: 141 LLLN-------------------------WCVQIAKGMMYLEERRLVHRDLAARNVLVKS 175
Query: 251 RGIVKLGDLGFSTKLQ 266
VK+ D G + L+
Sbjct: 176 PNHVKITDFGLARLLE 191
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 54/200 (27%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREI-VSMESVH 127
E+GRG + +V +H+ I+ A+K + ++ + K +K L ++ V M S
Sbjct: 28 GEIGRGAYGSVNKMVHKPSGQIM-------AVKRI-RSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 128 HPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
P I++ Y L G ++ +E L+ + F
Sbjct: 80 CPYIVQFYGALFREGDCWICME-----------------------------LMSTSFDKF 110
Query: 188 GK-IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDR-DIIHRDIKAEN 245
K ++ V++ E+ KIT L + A+ HL + IIHRDIK N
Sbjct: 111 YKYVYSVLDDVIPEEILGKIT--------------LATVKALNHLKENLKIIHRDIKPSN 156
Query: 246 VFLSVRGIVKLGDLGFSTKL 265
+ L G +KL D G S +L
Sbjct: 157 ILLDRSGNIKLCDFGISGQL 176
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 73 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 130
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 131 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 74 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 131
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 132 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 74 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 131
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 132 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 154 GELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS 213
GE+ ++ TEG + +D + L LL L + G +V+ Y G+L N I E
Sbjct: 132 GEV-SQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 189
Query: 214 EDDAKIYF-LQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I F LQ+ +K L + +HRD+ A N L + VK+ D G +
Sbjct: 190 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 188 GKIFLVVEYAS---GGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G I+LV ++ G L N + + + + K +L+ + ++H I+HRD+KA
Sbjct: 97 GSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAA 153
Query: 245 NVFLSVRGIVKLGDLGFS 262
NV ++ G++KL D G +
Sbjct: 154 NVLITRDGVLKLADFGLA 171
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 188 GKIFLVVEYAS---GGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G I+LV ++ G L N + + + + K +L+ + ++H I+HRD+KA
Sbjct: 98 GSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAA 154
Query: 245 NVFLSVRGIVKLGDLGFS 262
NV ++ G++KL D G +
Sbjct: 155 NVLITRDGVLKLADFGLA 172
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 60/215 (27%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
K W + R ++ KL LG G F V M + + +A+K L ++
Sbjct: 1 KPWDKDAWEIPRESI-KLVKRLGAGQFGEVWMGYY--------NNSTKVAVKTLKPGTMS 51
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 169
+A E M+++ H ++RLY V+ I+++ EY + G L + L D
Sbjct: 52 VQA---FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLD------FLKSD 102
Query: 170 DAKIYFLQILLYEVLETFGKIFL--VVEYASGGELYNKITTEGRLSEDDAKIYFLQILSA 227
+ GK+ L ++++++ QI
Sbjct: 103 EG----------------GKVLLPKLIDFSA------------------------QIAEG 122
Query: 228 VKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ ++ ++ IHRD++A NV +S + K+ D G +
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 14 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 68
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 69 YIVRMIGICEA--------------------------------------------ESW-- 82
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 83 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 140
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 141 VTQHYAKISDFGLSKALR 158
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 18 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 73 YIVRMIGICEA--------------------------------------------ESW-- 86
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 87 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 145 VTQHYAKISDFGLSKALR 162
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 12 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 66
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 67 YIVRMIGICEA--------------------------------------------ESW-- 80
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 81 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 138
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 139 VTQHYAKISDFGLSKALR 156
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 18 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 73 YIVRMIGICEA--------------------------------------------ESW-- 86
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 87 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 145 VTQHYAKISDFGLSKALR 162
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL++V ++ E +L+ L++E
Sbjct: 68 LETFEHPNVVRLFDVCTV-----------------SRTDRETKLT-----------LVFE 99
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ +L +K+ G +E + F Q+L + LH ++HRD+K
Sbjct: 100 HVDQDLTTYL-----------DKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLK 147
Query: 243 AENVFLSVRGIVKLGDLGFS 262
+N+ ++ G +KL D G +
Sbjct: 148 PQNILVTSSGQIKLADFGLA 167
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 50/243 (20%)
Query: 27 AKLTPKARKMLIYEKTQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAI 83
+L+ A ++ ++ +L D KW+ + +LGK LG G F V MA
Sbjct: 51 TRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGK---------PLGEGCFGQVVMAE 101
Query: 84 HEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFG 142
+A+K+L K T K L E+ M+ + H NII L G
Sbjct: 102 AVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160
Query: 143 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGEL 202
++++VEYAS +G L E +L G E
Sbjct: 161 PLYVIVEYAS----------KGNLRE----------------------YLRARRPPGMEY 188
Query: 203 Y---NKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDL 259
N++ E +D + Q+ +++L + IHRD+ A NV ++ ++K+ D
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 247
Query: 260 GFS 262
G +
Sbjct: 248 GLA 250
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL++V ++ E +L+ L++E
Sbjct: 68 LETFEHPNVVRLFDVCTV-----------------SRTDRETKLT-----------LVFE 99
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ +L +K+ G +E + F Q+L + LH ++HRD+K
Sbjct: 100 HVDQDLTTYL-----------DKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLK 147
Query: 243 AENVFLSVRGIVKLGDLGFS 262
+N+ ++ G +KL D G +
Sbjct: 148 PQNILVTSSGQIKLADFGLA 167
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 24 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 78
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 79 YIVRMIGICEA--------------------------------------------ESW-- 92
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 93 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 150
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 151 VTQHYAKISDFGLSKALR 168
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 188 GKIFLVVEYAS---GGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAE 244
G I+LV ++ G L N + + LSE K +L+ + ++H I+HRD+KA
Sbjct: 98 GSIYLVFDFCEHDLAGLLSN-VLVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRDMKAA 154
Query: 245 NVFLSVRGIVKLGDLGFS 262
NV ++ G++KL D G +
Sbjct: 155 NVLITRDGVLKLADFGLA 172
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
LS D + QIL +K++H +++HRD+K N+ L+ +K+ D G +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 40/140 (28%)
Query: 123 MESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYE 182
+E+ HPN++RL++V ++ E +L+ L++E
Sbjct: 68 LETFEHPNVVRLFDVCTV-----------------SRTDRETKLT-----------LVFE 99
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
++ +L +K+ G +E + F Q+L + LH ++HRD+K
Sbjct: 100 HVDQDLTTYL-----------DKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLK 147
Query: 243 AENVFLSVRGIVKLGDLGFS 262
+N+ ++ G +KL D G +
Sbjct: 148 PQNILVTSSGQIKLADFGLA 167
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 14 KFLQQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 68
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++EY G L + L + +I +++L Y
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTS 122
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHR++
Sbjct: 123 ---------------------------------------QICKGMEYLGTKRYIHRNLAT 143
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 144 RNILVENENRVKIGDFGLTKVLPQ 167
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 57/213 (26%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
K W+ + R +L KL+ +LG G F V MA + + + +A+K + ++
Sbjct: 3 KPWEKDAWEIPRESL-KLEKKLGAGQFGEVWMATYNKH--------TKVAVKTMKPGSMS 53
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 169
+A E M+++ H +++L+ V+ T I+++ E+ + G L +
Sbjct: 54 VEA---FLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLD----------- 98
Query: 170 DAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVK 229
FL + S L I + QI +
Sbjct: 99 ---------------------FLKSDEGSKQPLPKLID------------FSAQIAEGMA 125
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ R+ IHRD++A N+ +S + K+ D G +
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK ++ + + +A+KIL P + L E M+ + +P
Sbjct: 34 ELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 88
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 89 YIVRMIGICEA--------------------------------------------ESW-- 102
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 103 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 161 VTQHYAKISDFGLSKALR 178
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK ++ + + +A+KIL P + L E M+ + +P
Sbjct: 34 ELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 88
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 89 YIVRMIGICEA--------------------------------------------ESW-- 102
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 103 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 161 VTQHYAKISDFGLSKALR 178
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 57/213 (26%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
K W+ + R +L KL+ +LG G F V MA + + + A+K + ++
Sbjct: 170 KPWEKDAWEIPRESL-KLEKKLGAGQFGEVWMATYNKHTKV--------AVKTMKPGSMS 220
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 169
+A E M+++ H +++L+ V+ T I+++ E+ + G L +
Sbjct: 221 VEA---FLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLD----------- 265
Query: 170 DAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVK 229
FL + S L I + QI +
Sbjct: 266 ---------------------FLKSDEGSKQPLPKLID------------FSAQIAEGMA 292
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ R+ IHRD++A N+ +S + K+ D G +
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
++LG+GNF +V++ Y P+ + +A+K L + P ++ REI ++++H
Sbjct: 16 SQLGKGNFGSVELCR---YDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 70
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
I++ + V Y G +
Sbjct: 71 DFIVK-----------YRGVSYGPGRQ--------------------------------- 86
Query: 189 KIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
+ LV+EY G L + + RL +Y QI +++L R +HRD+ A N+
Sbjct: 87 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 248 LSVRGIVKLGDLGFS 262
+ VK+ D G +
Sbjct: 147 VESEAHVKIADFGLA 161
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 62/223 (27%)
Query: 42 TQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIK 101
+Q Q W+ E + + KL LG G F V M + + + A+K
Sbjct: 2 SQTQKPQKPWWEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVK 51
Query: 102 ILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKIT 161
L + ++P A E M+ + H ++RLY V +T
Sbjct: 52 SLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV----------------------VT 86
Query: 162 TEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYF 221
E I+++ EY G L + + T + K+
Sbjct: 87 QE-------------------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 222 L--QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ QI + + +R+ IHRD++A N+ +S K+ D G +
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
++LG+GNF +V++ Y P+ + +A+K L + P ++ REI ++++H
Sbjct: 29 SQLGKGNFGSVELCR---YDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 83
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
I++ + V Y G +
Sbjct: 84 DFIVK-----------YRGVSYGPGRQ--------------------------------- 99
Query: 189 KIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
+ LV+EY G L + + RL +Y QI +++L R +HRD+ A N+
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 248 LSVRGIVKLGDLGFS 262
+ VK+ D G +
Sbjct: 160 VESEAHVKIADFGLA 174
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G F E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 15 MKHKLGGGQFG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 64
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V +++ E+ + G L + L E + + +LLY
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 116
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 117 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 140
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 141 LVGENHLVKVADFGLS 156
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 54/198 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++ ++G G+F TV A + S +A+KIL + + RE+ M+ +
Sbjct: 41 IKEKIGAGSFGTVHRAEW---------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPNI+ + + +V EY S G LY + G E L+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG---------------AREQLDE 136
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRD--IIHRDIKAE 244
++ + + A G + +LH+R+ I+HR++K+
Sbjct: 137 RRRLSMAYDVAKG----------------------------MNYLHNRNPPIVHRNLKSP 168
Query: 245 NVFLSVRGIVKLGDLGFS 262
N+ + + VK+ D G S
Sbjct: 169 NLLVDKKYTVKVCDFGLS 186
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK +++ + +A+KIL P + L E M+ + +P
Sbjct: 32 ELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 86
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 87 YIVRMIGICEA--------------------------------------------ESW-- 100
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 101 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 158
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 159 VTQHYAKISDFGLSKALR 176
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
++LG+GNF +V++ Y P+ + +A+K L + P ++ REI ++++H
Sbjct: 17 SQLGKGNFGSVELCR---YDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 71
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
I++ + V Y G +
Sbjct: 72 DFIVK-----------YRGVSYGPGRQ--------------------------------- 87
Query: 189 KIFLVVEYASGGELYNKITTE-GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
+ LV+EY G L + + RL +Y QI +++L R +HRD+ A N+
Sbjct: 88 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 248 LSVRGIVKLGDLGFS 262
+ VK+ D G +
Sbjct: 148 VESEAHVKIADFGLA 162
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 40/150 (26%)
Query: 117 SREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
REI + + HPN+I L +V LS D K++
Sbjct: 66 CREIALLRELKHPNVISLQKVF---------------------------LSHADRKVW-- 96
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDI 236
LL++ E ++ ++++ + K +L K QIL + +LH +
Sbjct: 97 --LLFDYAEH--DLWHIIKFHRASKANKKPV---QLPRGMVKSLLYQILDGIHYLHANWV 149
Query: 237 IHRDIKAENVFL----SVRGIVKLGDLGFS 262
+HRD+K N+ + RG VK+ D+GF+
Sbjct: 150 LHRDLKPANILVMGEGPERGRVKIADMGFA 179
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 57/213 (26%)
Query: 50 KKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLT 109
K W+ + R +L KL+ +LG G F V MA + + + A+K + ++
Sbjct: 176 KPWEKDAWEIPRESL-KLEKKLGAGQFGEVWMATYNKHTKV--------AVKTMKPGSMS 226
Query: 110 PKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 169
+A E M+++ H +++L+ V+ T I+++ E+ + G L +
Sbjct: 227 VEA---FLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLD----------- 271
Query: 170 DAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVK 229
FL + S L I + QI +
Sbjct: 272 ---------------------FLKSDEGSKQPLPKLID------------FSAQIAEGMA 298
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ R+ IHRD++A N+ +S + K+ D G +
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 62/222 (27%)
Query: 43 QNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKI 102
Q Q W+ E + + KL LG G F V M + + + A+K
Sbjct: 1 QTQKPQKPWWEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKS 50
Query: 103 LDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITT 162
L + ++P A E M+ + H ++RLY V +T
Sbjct: 51 LKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV----------------------VTQ 85
Query: 163 EGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 222
E I+++ EY G L + + T + K+ +
Sbjct: 86 E-------------------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 223 --QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI + + +R+ IHRD++A N+ +S K+ D G +
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
+ +LV E GG + + I +E +A + + SA+ LH++ I HRD+K EN+
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 7 SEYELPEDPKWEFPRDKLTLGK---------PLGEGCFGQVVMAEAVGIDKDKPKEAVTV 57
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 58 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 111
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 112 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 145 DLVSCTY-QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 52/204 (25%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
K +LG+GNF +V+M Y P+ +A+K L + T + + REI ++S
Sbjct: 16 KFLRQLGKGNFGSVEMC---RYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKS 70
Query: 126 VHHPNIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
+ H NI++ V + G+ + L++E+ G L L + +I +++L Y
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLRE------YLQKHKERIDHIKLLQYTS 124
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
QI +++L + IHRD+
Sbjct: 125 ---------------------------------------QICKGMEYLGTKRYIHRDLAT 145
Query: 244 ENVFLSVRGIVKLGDLGFSTKLQQ 267
N+ + VK+GD G + L Q
Sbjct: 146 RNILVENENRVKIGDFGLTKVLPQ 169
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 69 NELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHH 128
++LG+GNF +V++ Y P+ + +A+K L + P ++ REI ++++H
Sbjct: 13 SQLGKGNFGSVELCR---YDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHS 67
Query: 129 PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFG 188
I++ + V Y G
Sbjct: 68 DFIVK-----------YRGVSYGPGRP--------------------------------- 83
Query: 189 KIFLVVEYASGGELYNKITT-EGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
++ LV+EY G L + + RL +Y QI +++L R +HRD+ A N+
Sbjct: 84 ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 248 LSVRGIVKLGDLGFS 262
+ VK+ D G +
Sbjct: 144 VESEAHVKIADFGLA 158
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 62/222 (27%)
Query: 43 QNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKI 102
Q Q W+ E + + KL LG G F V M + + + A+K
Sbjct: 1 QTQKPQKPWWEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKS 50
Query: 103 LDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITT 162
L + ++P A E M+ + H ++RLY V +T
Sbjct: 51 LKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV----------------------VTQ 85
Query: 163 EGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 222
E I+++ EY G L + + T + K+ +
Sbjct: 86 E-------------------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 223 --QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI + + +R+ IHRD++A N+ +S K+ D G +
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 62/222 (27%)
Query: 43 QNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKI 102
Q Q W+ E + + KL LG G F V M + + + A+K
Sbjct: 5 QTQKPQKPWWEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKS 54
Query: 103 LDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITT 162
L + ++P A E M+ + H ++RLY V +T
Sbjct: 55 LKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV----------------------VTQ 89
Query: 163 EGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 222
E I+++ EY G L + + T + K+ +
Sbjct: 90 E-------------------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 223 --QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI + + +R+ IHRD++A N+ +S K+ D G +
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
++++E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 148 LVGENHLVKVADFGLS 163
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 9 SEYELPEDPKWEFPRDKLTLGK---------PLGEGCFGQVVMAEAVGIDKDKPKEAVTV 59
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 60 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 113
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 114 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 147 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 12 SEYELPEDPKWEFPRDKLTLGK---------PLGEGCFGQVVMAEAVGIDKDKPKEAVTV 62
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 63 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 116
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 117 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 150 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 53/200 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
+LG G+F V + Y P +A+K L K P+ R REI + +++H
Sbjct: 15 DLGEGHFGKVSLYC---YDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHE 70
Query: 130 NIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+I++ E G+ + LV+EY G L + + + Q+LL+
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--------VGLAQLLLFAQ---- 118
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
QI + +LH + IHR + A NV
Sbjct: 119 -----------------------------------QICEGMAYLHAQHYIHRALAARNVL 143
Query: 248 LSVRGIVKLGDLGFSTKLQQ 267
L +VK+GD G + + +
Sbjct: 144 LDNDRLVKIGDFGLAKAVPE 163
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 25/219 (11%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 23 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 79
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKI-----------TTEGRLSEDDAK 172
HH N++ L + G + ++VE+ G L + T R +
Sbjct: 80 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 139
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK---------IYFLQ 223
+ + + L L++ E E ED K Y Q
Sbjct: 140 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 199
Query: 224 ILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ ++ L R IHRD+ A N+ LS + +VK+ D G +
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 238
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
I L V+ ++ L+ EYA +L + +S K + Q+++ V H R +
Sbjct: 96 IELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 238 HRDIKAENVFLSVR-----GIVKLGDLGFS 262
HRD+K +N+ LSV ++K+GD G +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 37/197 (18%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L LGRG F V A + + +A+K+L + + R ++S + +
Sbjct: 31 LGKPLGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 127 HHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
HH N++ L + G + ++VE+ G L + ++
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-------------------- 128
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAEN 245
E+ +LY T L Y Q+ ++ L R IHRD+ A N
Sbjct: 129 ---------EFVPYKDLYKDFLTLEHLI-----CYSFQVAKGMEFLASRKXIHRDLAARN 174
Query: 246 VFLSVRGIVKLGDLGFS 262
+ LS + +VK+ D G +
Sbjct: 175 ILLSEKNVVKICDFGLA 191
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 29/198 (14%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTY--ISYLAIKILDKAKLTPKARKMLSREIVSMESVH 127
++G G F V A P L Y + +A+K+L K + + + RE M
Sbjct: 54 DIGEGAFGRVFQA----RAPGLLPYEPFTMVAVKML-KEEASADMQADFQREAALMAEFD 108
Query: 128 HPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+PNI++L V + L+ EY + G+L + + + + L + L T
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS--------MSPHTVCSLSHSDLSTR 160
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
++ +S G LS + Q+ + + +L +R +HRD+ N
Sbjct: 161 ARV------SSPGP--------PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL 206
Query: 248 LSVRGIVKLGDLGFSTKL 265
+ +VK+ D G S +
Sbjct: 207 VGENMVVKIADFGLSRNI 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T + L E+ M+ + H NII L G ++++VEYAS G L
Sbjct: 71 AVKML-KDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL- 128
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+ +L G E N++ E +
Sbjct: 129 -------------------------------REYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 53/200 (26%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
+LG G+F V + Y P +A+K L K P+ R REI + +++H
Sbjct: 16 DLGEGHFGKVSLYC---YDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHE 71
Query: 130 NIIRLYEVLETFGK--IFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETF 187
+I++ E G+ + LV+EY G L + + + Q+LL+
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--------VGLAQLLLFAQ---- 119
Query: 188 GKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVF 247
QI + +LH + IHR + A NV
Sbjct: 120 -----------------------------------QICEGMAYLHAQHYIHRALAARNVL 144
Query: 248 LSVRGIVKLGDLGFSTKLQQ 267
L +VK+GD G + + +
Sbjct: 145 LDNDRLVKIGDFGLAKAVPE 164
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 25/219 (11%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 81
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKI-----------TTEGRLSEDDAK 172
HH N++ L + G + ++VE+ G L + T R +
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 141
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK---------IYFLQ 223
+ + + L L++ E E ED K Y Q
Sbjct: 142 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 201
Query: 224 ILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ ++ L R IHRD+ A N+ LS + +VK+ D G +
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
++++E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 145 VGENHLVKVADFGLS 159
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 182 EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDI 241
E L+ F +LV+ + G K+ +L ED + Q+L ++++H IIHRD+
Sbjct: 97 ETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDL 154
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
K N+ ++ +K+ D G +
Sbjct: 155 KPGNLAVNEDCELKILDFGLA 175
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 195 EYASGGELYNKITTEGRL----SEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
EY +GG L + I+ R+ E + K LQ+ ++++H ++H DIK N+F+S
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 251 RGI-------------------VKLGDLGFSTKL 265
I K+GDLG T++
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 182
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 17 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 66
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V ++++E+ + G L + L E + + +LLY
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 119 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 25/219 (11%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 32 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 88
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKI-----------TTEGRLSEDDAK 172
HH N++ L + G + ++VE+ G L + T R +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 148
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK---------IYFLQ 223
+ + + L L++ E E ED K Y Q
Sbjct: 149 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 208
Query: 224 ILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ ++ L R IHRD+ A N+ LS + +VK+ D G +
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 247
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 195 EYASGGELYNKITTEGRL----SEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
EY +GG L + I+ R+ E + K LQ+ ++++H ++H DIK N+F+S
Sbjct: 87 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 146
Query: 251 RGI-------------------VKLGDLGFSTKL 265
I K+GDLG T++
Sbjct: 147 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 180
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 195 EYASGGELYNKITTEGRL----SEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
EY +GG L + I+ R+ E + K LQ+ ++++H ++H DIK N+F+S
Sbjct: 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150
Query: 251 RGI-------------------VKLGDLGFSTKL 265
I K+GDLG T++
Sbjct: 151 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 184
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 195 EYASGGELYNKITTEGRL----SEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
EY +GG L + I+ R+ E + K LQ+ ++++H ++H DIK N+F+S
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 251 RGI-------------------VKLGDLGFSTKL 265
I K+GDLG T++
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 46/169 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPNII L V+ + +V EY G L
Sbjct: 53 VAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL- 110
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L ++D + +Q++ G L
Sbjct: 111 -----DTFLKKNDGQFTVIQLV------------------------------GMLR---- 131
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
I + +K+L D +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 132 -----GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 159 KITTEGRLSEDDAKIYFLQ-------------ILLYEVLETFGKIFLVVEYASGGELYNK 205
K+ EG +SED+ F Q + Y V I++V EY S G L N
Sbjct: 38 KMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 206 ITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ + G+ E + + + L IHRD+ A N + VK+ D G +
Sbjct: 94 LRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 25/219 (11%)
Query: 66 KLQNELGRGNFSTVKMA-IHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
KL LGRG F V A I C + A+K+L + + R ++S + +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTV---AVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 SVHHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKI-----------TTEGRLSEDDAK 172
HH N++ L + G + ++VE+ G L + T R +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 146
Query: 173 IYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK---------IYFLQ 223
+ + + L L++ E E ED K Y Q
Sbjct: 147 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 206
Query: 224 ILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ ++ L R IHRD+ A N+ LS + +VK+ D G +
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SEDD K+ +++ LY V I LV E+ G L + + T+
Sbjct: 57 KTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ 116
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 117 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 15 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 64
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V ++++E+ + G L + L E + + +LLY
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 116
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 117 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 140
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 141 LVGENHLVKVADFGLS 156
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK ++ + + +A+KIL P + L E M+ + +P
Sbjct: 377 ELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 431
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 432 YIVRMIGICEA--------------------------------------------ESW-- 445
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 446 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 503
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 504 VTQHYAKISDFGLSKALR 521
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV I ++P +AIK+L + +PKA K + E M V P
Sbjct: 25 LGSGAFGTVYKGI---WIPDGENVKIPVAIKVL-RENTSPKANKEILDEAYVMAGVGSPY 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + LV + G L + + E R
Sbjct: 81 VSRLLGICLT-STVQLVTQLMPYGCLLDHVR-ENR------------------------- 113
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
GRL D + +QI + +L D ++HRD+ A NV +
Sbjct: 114 -------------------GRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKS 154
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 155 PNHVKITDFGLA 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 17 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 66
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V ++++E+ + G L + L E + + +LLY
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 119 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 54/198 (27%)
Query: 70 ELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHP 129
ELG GNF TVK ++ + + +A+KIL P + L E M+ + +P
Sbjct: 376 ELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 430
Query: 130 NIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGK 189
I+R+ + E E++
Sbjct: 431 YIVRMIGICEA--------------------------------------------ESW-- 444
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL-QILSAVKHLHDRDIIHRDIKAENVFL 248
LV+E A G L NK + R +D I + Q+ +K+L + + +HRD+ A NV L
Sbjct: 445 -MLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 502
Query: 249 SVRGIVKLGDLGFSTKLQ 266
+ K+ D G S L+
Sbjct: 503 VTQHYAKISDFGLSKALR 520
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 37/197 (18%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
L LGRG F V A + + +A+K+L + + R ++S + +
Sbjct: 31 LGKPLGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 127 HHPNIIRLY-EVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
HH N++ L + G + ++VE+ G L + ++
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-------------------- 128
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAEN 245
E+ +LY T L Y Q+ ++ L R IHRD+ A N
Sbjct: 129 ---------EFVPYKDLYKDFLTLEHLI-----XYSFQVAKGMEFLASRKXIHRDLAARN 174
Query: 246 VFLSVRGIVKLGDLGFS 262
+ LS + +VK+ D G +
Sbjct: 175 ILLSEKNVVKIXDFGLA 191
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 180 LYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHR 239
L E E + +LV E GG + I + +E +A + +A+ LH + I HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 240 DIKAENVFL 248
D+K EN+
Sbjct: 136 DLKPENILC 144
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 159 KITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAK 218
+IT RL + D I +++ + L F ++++V+E A +L T L+E+ K
Sbjct: 75 EITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIK 132
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+L +H+ IIHRD+K N L+ VK+ D G +
Sbjct: 133 TILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 38/145 (26%)
Query: 118 REIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ 177
REI ++ + H N++ L E+ T YN+ A IY
Sbjct: 66 REIKILQLLKHENVVNLIEICRT------------KASPYNRCK---------ASIYL-- 102
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDII 237
+F E+ G L N + + LSE K +L+ + ++H I+
Sbjct: 103 ------------VFDFCEHDLAGLLSN-VLVKFTLSE--IKRVMQMLLNGLYYIHRNKIL 147
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFS 262
HRD+KA NV ++ G++KL D G +
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 148 LVGENHLVKVADFGLS 163
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++V YAS G L
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL- 128
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+ +L G E N++ E +
Sbjct: 129 -------------------------------REYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++VEYAS
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS----- 124
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+G L E +L G E N++ E +
Sbjct: 125 -----KGNLRE----------------------YLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++++ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 64/233 (27%)
Query: 30 TPKARKMLIYEKTQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVP 89
PK K IY + N KW+ E R + ++++LG G + E+Y
Sbjct: 197 APKRNKPTIYGVSPNY----DKWEME-----RTDI-TMKHKLGGGQYG-------EVYEG 239
Query: 90 ILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVE 149
+ Y +A+K L + + + + L +E M+ + HPN+++L V +++ E
Sbjct: 240 VWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296
Query: 150 YASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTE 209
+ + G L + L E + + +LLY
Sbjct: 297 FMTYGNLLD------YLRECNRQEVSAVVLLYMAT------------------------- 325
Query: 210 GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI SA+++L ++ IHR++ A N + +VK+ D G S
Sbjct: 326 -------------QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 145 VGENHLVKVADFGLS 159
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 17 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 66
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V +++ E+ + G L + L E + + +LLY
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 119 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 156
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 157 VGENHLVKVADFGLS 171
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 87 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 146
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 147 LVGENHLVKVADFGLS 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENV 246
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 148 LVGENHLVKVADFGLS 163
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 146 VGENHLVKVADFGLS 160
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 146 VGENHLVKVADFGLS 160
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 22 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 71
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V +++ E+ + G L + L E + + +LLY
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 123
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 124 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 147
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 148 LVGENHLVKVADFGLS 163
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 146 VGENHLVKVADFGLS 160
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 15 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 64
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V +++ E+ + G L + L E + + +LLY
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 116
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 117 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 140
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 141 LVGENHLVKVADFGLS 156
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDR--------DII 237
++ +++L+ +Y G LY+ + + ++ K+ + + S + HLH I
Sbjct: 106 SWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSV-SGLCHLHTEIFSTQGKPAIA 164
Query: 238 HRDIKAENVFLSVRGIVKLGDLGFSTKL 265
HRD+K++N+ + G + DLG + K
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKF 192
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 54/196 (27%)
Query: 67 LQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESV 126
++++LG G + E+Y + Y +A+K L + + + + L +E M+ +
Sbjct: 17 MKHKLGGGQYG-------EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEI 66
Query: 127 HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLET 186
HPN+++L V +++ E+ + G L + L E + + +LLY
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMAT-- 118
Query: 187 FGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
QI SA+++L ++ IHRD+ A N
Sbjct: 119 ------------------------------------QISSAMEYLEKKNFIHRDLAARNC 142
Query: 247 FLSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 143 LVGENHLVKVADFGLS 158
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 190 IFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKAENVF 247
+++ E+ + G L + + R + + ++ QI SA+++L ++ IHRD+ A N
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 248 LSVRGIVKLGDLGFS 262
+ +VK+ D G S
Sbjct: 149 VGENHLVKVADFGLS 163
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 50/228 (21%)
Query: 42 TQNQLQNDKKWQ---HETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYL 98
++ +L D KW+ + +LGK LG G F V MA +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGK---------PLGEGAFGQVVMAEAVGIDKDKPKEAVTV 70
Query: 99 AIKILDKAKLTPKARKMLSREIVSMESV-HHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
A+K+L K T K L E+ M+ + H NII L G ++++V YAS G L
Sbjct: 71 AVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL- 128
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELY---NKITTEGRLSE 214
+ +L G E N++ E +
Sbjct: 129 -------------------------------REYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 DDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
D + Q+ +++L + IHRD+ A NV ++ ++K+ D G +
Sbjct: 158 DLVSCTY-QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 190 IFLVVEYASGGELY-------NKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
I L++E+ G L NKI + +L Y +QI + +L R +HRD+
Sbjct: 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLK------YAVQICKGMDYLGSRQYVHRDLA 153
Query: 243 AENVFLSVRGIVKLGDLGFSTKLQ 266
A NV + VK+GD G + ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIE 177
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 190 IFLVVEYASGGELY-------NKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIK 242
I L++E+ G L NKI + +L Y +QI + +L R +HRD+
Sbjct: 88 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLK------YAVQICKGMDYLGSRQYVHRDLA 141
Query: 243 AENVFLSVRGIVKLGDLGFSTKLQ 266
A NV + VK+GD G + ++
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAIE 165
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
++V+EY G L K + +L +A Y L+IL A+ +LH +++ D+K EN+ L+
Sbjct: 160 YIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 251 RGIVKLGDLGFSTKLQQ 267
+ KL DLG +++
Sbjct: 218 EQL-KLIDLGAVSRINS 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 39/213 (18%)
Query: 53 QHETSLGKRVAL--YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTP 110
QH+ + K ++L + ELG F V ++ P +AIK L K K
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKG--HLFGPAPGEQTQAVAIKTL-KDKAEG 70
Query: 111 KARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDD 170
R+ E + + HPN++ L V+ + ++ Y S G+L+
Sbjct: 71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE------------ 118
Query: 171 AKIYFLQILLYEVLETFGKIFLVV--EYASGGELYNKITTEGRLSEDDAKIYFLQILSAV 228
FLV+ ++ G + T + L D QI + +
Sbjct: 119 --------------------FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM 158
Query: 229 KHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGF 261
++L ++H+D+ NV + + VK+ DLG
Sbjct: 159 EYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 46/172 (26%)
Query: 96 SYLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGE 155
S +AIK L K T + R+ E M HPNIIRL V+ + ++ E+ G
Sbjct: 43 SCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 101
Query: 156 LYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 215
L + L +D + +Q++ G L
Sbjct: 102 L------DSFLRLNDGQFTVIQLV--------------------GMLRG----------- 124
Query: 216 DAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +++L + +HRD+ A N+ ++ + K+ D G S L++
Sbjct: 125 --------IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFL-SVRGIVKLGDLG 260
K+Y Q+L ++ ++H I HRDIK +N+ L G++KL D G
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 4 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 53
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 54 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 80
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 81 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 4 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 53
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 54 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 80
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 81 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + +A+K L + ++P
Sbjct: 13 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGH--------TKVAVKSLKQGSMSPD 62
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 63 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 89
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 90 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 60/176 (34%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T + R+ E M HPNIIRL
Sbjct: 80 VAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRL----------------------- 115
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ T GRL+ +V EY G L + T D
Sbjct: 116 EGVVTRGRLA-----------------------MIVTEYMENGSLDTFLRTH------DG 146
Query: 218 KIYFLQIL-------SAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+ +Q++ + +++L D +HRD+ A NV + + K+ D G S L+
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 5 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 54
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 55 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 81
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 82 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 9 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 58
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 59 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 85
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 86 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 91/233 (39%), Gaps = 64/233 (27%)
Query: 30 TPKARKMLIYEKTQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVP 89
PK K +Y + N KW+ E R + ++++LG G + E+Y
Sbjct: 194 APKRNKPTVYGVSPNY----DKWEME-----RTDI-TMKHKLGGGQYG-------EVYEG 236
Query: 90 ILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVE 149
+ Y +A+K L + + + + L +E M+ + HPN+++L V +++ E
Sbjct: 237 VWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 293
Query: 150 YASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTE 209
+ + G L + L E + + +LLY
Sbjct: 294 FMTYGNLLD------YLRECNRQEVNAVVLLYMAT------------------------- 322
Query: 210 GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI SA+++L ++ IHR++ A N + +VK+ D G S
Sbjct: 323 -------------QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 60/176 (34%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T + R+ E M HPNIIRL
Sbjct: 80 VAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRL----------------------- 115
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ T GRL+ +V EY G L + T D
Sbjct: 116 EGVVTRGRLA-----------------------MIVTEYMENGSLDTFLRTH------DG 146
Query: 218 KIYFLQIL-------SAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
+ +Q++ + +++L D +HRD+ A NV + + K+ D G S L+
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 46/172 (26%)
Query: 96 SYLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGE 155
S +AIK L K T + R+ E M HPNIIRL V+ + ++ E+ G
Sbjct: 45 SCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 103
Query: 156 LYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSED 215
L + L +D + +Q++ G L
Sbjct: 104 L------DSFLRLNDGQFTVIQLV--------------------GMLRG----------- 126
Query: 216 DAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
I S +++L + +HRD+ A N+ ++ + K+ D G S L++
Sbjct: 127 --------IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 6 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 55
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 56 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 82
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 83 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 52 WQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPK 111
W+ E + + KL LG G F V M + + + A+K L + ++P
Sbjct: 4 WEDEWEVPRET--LKLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPD 53
Query: 112 ARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 171
A E M+ + H ++RLY V +T E
Sbjct: 54 A---FLAEANLMKQLQHQRLVRLYAV----------------------VTQE-------- 80
Query: 172 KIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVK 229
I+++ EY G L + + T + K+ + QI +
Sbjct: 81 -----------------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 230 HLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +R+ IHRD++A N+ +S K+ D G +
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 46/169 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L KA T K R E M H NIIRL V+ + + ++ EY G L
Sbjct: 76 VAIKTL-KAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL- 133
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L E D + LQ++ G L
Sbjct: 134 -----DKFLREKDGEFSVLQLV--------------------GMLRG------------- 155
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
I + +K+L + + +HRD+ A N+ ++ + K+ D G S L+
Sbjct: 156 ------IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 46/170 (27%)
Query: 97 YLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGEL 156
++AIK L K+ T K R+ E M HPN+I L V+ + ++ E+ G L
Sbjct: 37 FVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 95
Query: 157 YNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDD 216
+ L ++D + +Q++ G L
Sbjct: 96 ------DSFLRQNDGQFTVIQLV--------------------GMLRG------------ 117
Query: 217 AKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKLQ 266
I + +K+L D + +HR + A N+ ++ + K+ D G S L+
Sbjct: 118 -------IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE 160
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 24 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 79
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGXLLDYVR--------------------EHKDNIGSQ 118
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 119 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 154 PQHVKITDFGLA 165
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 91/233 (39%), Gaps = 64/233 (27%)
Query: 30 TPKARKMLIYEKTQNQLQNDKKWQHETSLGKRVALYKLQNELGRGNFSTVKMAIHEIYVP 89
PK K +Y + N KW+ E R + ++++LG G + E+Y
Sbjct: 236 APKRNKPTVYGVSPNY----DKWEME-----RTDI-TMKHKLGGGQYG-------EVYEG 278
Query: 90 ILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVE 149
+ Y +A+K L + + + + L +E M+ + HPN+++L V +++ E
Sbjct: 279 VWKKYSLTVAVKTLKEDTM--EVEEFL-KEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 335
Query: 150 YASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTE 209
+ + G L + L E + + +LLY
Sbjct: 336 FMTYGNLLD------YLRECNRQEVNAVVLLYMAT------------------------- 364
Query: 210 GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
QI SA+++L ++ IHR++ A N + +VK+ D G S
Sbjct: 365 -------------QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SE+D K+ +++ LY V I LV E+ G L + + T+
Sbjct: 37 KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ 96
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTE--GRLSEDDAKIYFLQILSAVKHLHDRD 235
+ LY V+ I+++ E+ + G L + + ++ G++ + QI + ++ ++
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 236 IIHRDIKAENVFLSVRGIVKLGDLGFS 262
IHRD++A NV +S + K+ D G +
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLA 156
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
Q++ +K+LH ++HRD+K N+ L+ VK+ D G S
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 195
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 196 RNCLLTCPGPGRVAKIGDFGMA 217
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 185
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 186 RNCLLTCPGPGRVAKIGDFGMA 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 23 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGXLLDYVR--------------------EHKDNIGSQ 117
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 118 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 153 PQHVKITDFGLA 164
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMA 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 178 ILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRD 235
+ LY V+ T I+++ EY G L + + T + K+ + QI + + +R+
Sbjct: 71 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 236 IIHRDIKAENVFLSVRGIVKLGDLGFS 262
IHRD++A N+ +S K+ D G +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 109 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SE+D K+ +++ LY V I LV E+ G L + + T+
Sbjct: 38 KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ 97
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 98 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMA 191
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMA 191
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 244 ENVFLSVRG---IVKLGDLGFSTKL 265
N L+ G + K+GD G + +
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDI 194
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 175
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 176 RNCLLTCPGPGRVAKIGDFGMA 197
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 186
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMA 208
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 55/212 (25%)
Query: 60 KRVALYKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSRE 119
K + ++++ G+G F TV++ + T +S +AIK K P+ R +RE
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEK------STGMS-VAIK---KVIQDPRFR---NRE 66
Query: 120 IVSMESV---HHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL 176
+ M+ + HHPNI++L T G E D + +L
Sbjct: 67 LQIMQDLAVLHHPNIVQLQSYFYTLG-------------------------ERDRRDIYL 101
Query: 177 QILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVK--HLHDR 234
+++ V +T + Y + + K++ Q++ ++ HL
Sbjct: 102 NVVMEYVPDTLHRCCR--------NYYRRQVAPPPIL---IKVFLFQLIRSIGCLHLPSV 150
Query: 235 DIIHRDIKAENVFLS-VRGIVKLGDLGFSTKL 265
++ HRDIK NV ++ G +KL D G + KL
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 124 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA 205
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA 205
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA 205
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQIL-------SAVKHLHDRDIIHRDIKA 243
F+++E +GG+L + + + + L +L ++L + IHRDI A
Sbjct: 101 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 160
Query: 244 ENVFLSVRG---IVKLGDLGFS 262
N L+ G + K+GD G +
Sbjct: 161 RNCLLTCPGPGRVAKIGDFGMA 182
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 60/199 (30%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
KL LG G F V M + + + A+K L + ++P A E M+
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPDA---FLAEANLMKQ 59
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H ++RLY V +T E
Sbjct: 60 LQHQRLVRLYAV----------------------VTQE---------------------- 75
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKA 243
I+++ EY G L + + T + K+ + QI + + +R+ IHRD++A
Sbjct: 76 ---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 132
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ +S K+ D G +
Sbjct: 133 ANILVSDTLSCKIADFGLA 151
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 25 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 119
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 120 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 155 PQHVKITDFGLA 166
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 138 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 126 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 24 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 79
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 118
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 119 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 154 PQHVKITDFGLA 165
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 144 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 48 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 103
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 104 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 142
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 143 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 177
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 178 PQHVKITDFGLA 189
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 129 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 23 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 79 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 117
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 118 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 153 PQHVKITDFGLA 164
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 222 LQILSAVKHLHDR-DIIHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+ I+ A+ +L ++ +IHRD+K N+ L RG +KL D G S +L
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 33 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 88
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 89 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 127
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 128 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 162
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 163 PQHVKITDFGLA 174
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV-RGIVKLGDLGFSTKL 265
K+Y Q+ ++ ++H I HRDIK +N+ L ++KL D G + +L
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SE+D K+ +++ LY V I LV E+ G L + + T+
Sbjct: 35 KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ 94
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 95 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 27 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 82
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 121
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 122 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 156
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 157 PQHVKITDFGLA 168
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 26 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 81
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 82 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 120
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 121 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 156 PQHVKITDFGLA 167
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SE+D K+ +++ LY V I LV E+ G L + + T+
Sbjct: 40 KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ 99
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 100 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 29 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 84
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 85 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 123
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 124 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 158
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 159 PQHVKITDFGLA 170
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 26 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 81
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 120
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 121 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 156 PQHVKITDFGLA 167
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 159 KITTEGRLSEDD--------AKIYFLQIL-LYEVLETFGKIFLVVEYASGGELYNKITTE 209
K EG +SE+D K+ +++ LY V I LV E+ G L + + T+
Sbjct: 37 KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ 96
Query: 210 -GRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
G + + L + + +L + +IHRD+ A N + ++K+ D G +
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 23 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 117
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 118 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 153 PQHVKITDFGLA 164
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 26 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 81
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 120
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 121 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 156 PQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 30 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 85
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 124
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 125 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 160 PQHVKITDFGLA 171
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 219 IYFLQILSAVKHLHDRDIIHRDIKAENVFLSVR-GIVKLGDLGFSTKL 265
IY Q+ AV +H I HRDIK +N+ ++ + +KL D G + KL
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 26 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 81
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 120
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 121 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 156 PQHVKITDFGLA 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 25 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 119
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 120 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 251 RGIVKLGDLGFS 262
VK+ D G +
Sbjct: 155 PQHVKITDFGLA 166
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 125
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 73 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 126
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 158
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+ +QI + +L DR ++HRD+ A NV + VK+ D G +
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 98 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 151
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 183
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 78 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 131
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 163
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 75 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 128
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 160
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 186 TFGKIFLVVEYASGGELYN-----KITTEGRLSEDDAKIYFLQILSAVKHLH-------- 232
T+ +++LV +Y G L++ +T EG + L S + HLH
Sbjct: 111 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHMEIVGTQG 164
Query: 233 DRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
I HRD+K++N+ + G + DLG + +
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 37/198 (18%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+ ELG F V ++ P +AIK L K K R+ E +
Sbjct: 12 RFMEELGEDRFGKVYKG--HLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRAR 68
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ HPN++ L V+ + ++ Y S G+L+
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE--------------------------- 101
Query: 186 TFGKIFLVV--EYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
FLV+ ++ G + T + L D QI + +++L ++H+D+
Sbjct: 102 -----FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 244 ENVFLSVRGIVKLGDLGF 261
NV + + VK+ DLG
Sbjct: 157 RNVLVYDKLNVKISDLGL 174
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 25 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 119
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 120 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 155 PQHVKITDFG 164
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 27 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 82
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 121
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 122 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 156
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 157 PQHVKITDFG 166
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 25 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 119
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 120 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 155 PQHVKITDFG 164
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 25 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 80
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+++ G L + + E + G
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVR--------------------EHKDNIGSQ 119
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 120 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 155 PQHVKITDFG 164
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V+EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V+EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 IRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 223 QILSAVKHLHD-RDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
+L++ ++H+ ++I HRD+K N+ + G VKL D G S
Sbjct: 159 SVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 14 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 62
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 63 LRHEKLVQLYAVV----------------------------SEE---------------- 78
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 79 ---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 131
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 132 DLRAANILVGENLVCKVADFGLA 154
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 30 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 85
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 124
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 125 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 160 PQHVKITDFG 169
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 50/190 (26%)
Query: 71 LGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMESVHHPN 130
LG G F TV + ++P +AIK L +A +PKA K + E M SV +P+
Sbjct: 23 LGSGAFGTVYKGL---WIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 131 IIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLETFGKI 190
+ RL + T + L+ + G L + + E + G
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVR--------------------EHKDNIGSQ 117
Query: 191 FLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLSV 250
+L+ + +QI + +L DR ++HRD+ A NV +
Sbjct: 118 YLLN-------------------------WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 251 RGIVKLGDLG 260
VK+ D G
Sbjct: 153 PQHVKITDFG 162
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 10 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 58
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 59 LRHEKLVQLYAVV----------------------------SEE---------------- 74
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 75 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 127
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 128 DLRAANILVGENLVCKVADFGLA 150
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSV 250
QI S V HLH IIHRD+K +N+ +S
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVST 168
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 187 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 235
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 236 LRHEKLVQLYAVV----------------------------SEE---------------- 251
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 252 ---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 304
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSV 250
QI S V HLH IIHRD+K +N+ +S
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVST 168
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 12 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 60
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 61 LRHEKLVQLYAVV----------------------------SEE---------------- 76
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 77 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 129
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 130 DLRAANILVGENLVCKVADFGLA 152
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 187 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 235
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 236 LRHEKLVQLYAVV----------------------------SEE---------------- 251
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 252 ---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 304
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSV 250
QI S V HLH IIHRD+K +N+ +S
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVST 150
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSV 250
QI S V HLH IIHRD+K +N+ +S
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVST 150
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 50/154 (32%)
Query: 116 LSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYF 175
RE+ M +++HPNI++LY ++ + +V+E+ G+LY+++ + + K
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK--- 124
Query: 176 LQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRD 235
L+++L I L +EY +
Sbjct: 125 LRLML--------DIALGIEYMQN--------------------------------QNPP 144
Query: 236 IIHRDIKAENVFL-----SVRGIVKLGDLGFSTK 264
I+HRD+++ N+FL + K+ D G S +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 72/199 (36%), Gaps = 60/199 (30%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
KL LG G F V M + + + A+K L + ++P A E M+
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTKV--------AVKSLKQGSMSPDA---FLAEANLMKQ 60
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H ++RLY V +T E
Sbjct: 61 LQHQRLVRLYAV----------------------VTQE---------------------- 76
Query: 186 TFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFL--QILSAVKHLHDRDIIHRDIKA 243
I+++ EY G L + + T + K+ + QI + + +R+ IHR+++A
Sbjct: 77 ---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRA 133
Query: 244 ENVFLSVRGIVKLGDLGFS 262
N+ +S K+ D G +
Sbjct: 134 ANILVSDTLSCKIADFGLA 152
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 192 LVVEYASGGELYNKITTEGR---LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
L++E+ G LY + L E + I ++ + HL + I+HR+IK N+
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145
Query: 249 SV----RGIVKLGDLGFSTKLQ 266
+ + + KL D G + +L+
Sbjct: 146 VIGEDGQSVYKLTDFGAARELE 167
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V+EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 220 YFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
+ + I +++L R+ IHRD+ A N L+ V + D G S K+
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 116 LSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
RE+ M +++HPNI++LY ++ + +V+E+ G+LY+++
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRL 112
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 192 LVVEYASGGELYNKITTEGRLSEDDAKI-YFLQILSAVKHLHDRD--IIHRDIKAENVFL 248
+V+E+ G+LY+++ + + K+ L I ++++ +++ I+HRD+++ N+FL
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
+ +LH R IIHRD+K+ N+ L + K+ D G S K
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 227 AVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFSTK 264
+ +LH R IIHRD+K+ N+ L + K+ D G S K
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 191 FLVVEYASGGELYNKIT---TEGR-LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENV 246
+L++ + G L+N+I +G L+ED L I ++ +H + HRD+K N+
Sbjct: 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNI 165
Query: 247 FLSVRGIVKLGDLG 260
L G L DLG
Sbjct: 166 LLGDEGQPVLMDLG 179
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 116 LSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKI 160
RE+ M +++HPNI++LY ++ + +V+E+ G+LY+++
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRL 112
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 192 LVVEYASGGELYNKITTEGRLSEDDAKI-YFLQILSAVKHLHDRD--IIHRDIKAENVFL 248
+V+E+ G+LY+++ + + K+ L I ++++ +++ I+HRD+++ N+FL
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157
Query: 249 -----SVRGIVKLGDLGFSTK 264
+ K+ D G S +
Sbjct: 158 QSLDENAPVCAKVADFGTSQQ 178
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 192 LVVEYASGGELYNKITTEGR---LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFL 248
L++E+ G LY + L E + I ++ + HL + I+HR+IK N+
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145
Query: 249 SV----RGIVKLGDLGFSTKLQ 266
+ + + KL D G + +L+
Sbjct: 146 VIGEDGQSVYKLTDFGAARELE 167
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 223 QILSAVKHLHDRDIIHRDIKAENVFLSV---RGIVK--LGDLGFSTKL 265
Q S + HLH +I+HRD+K N+ +S+ G +K + D G KL
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 46/165 (27%)
Query: 98 LAIKILDKAKLTPKARKMLSREIVSMESVHHPNIIRLYEVLETFGKIFLVVEYASGGELY 157
+AIK L K T K R+ E M HPN++ L V+ + +V+E+ G L
Sbjct: 74 VAIKTL-KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL- 131
Query: 158 NKITTEGRLSEDDAKIYFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDA 217
+ L + D + +Q++ G L
Sbjct: 132 -----DAFLRKHDGQFTVIQLV------------------------------GMLR---- 152
Query: 218 KIYFLQILSAVKHLHDRDIIHRDIKAENVFLSVRGIVKLGDLGFS 262
I + +++L D +HRD+ A N+ ++ + K+ D G S
Sbjct: 153 -----GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 21 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 69
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 70 LRHEKLVQLYAVV----------------------------SEE---------------- 85
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 86 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 138
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D+ A N+ + + K+ D G +
Sbjct: 139 DLAAANILVGENLVCKVADFGLA 161
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 135 YEVLET-----FGKIFLVVEYASGGE----------------LYNKITTEGRLSEDDAKI 173
YE+++T FGK+ +++ +GG ++I L+ D
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 174 YFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS--EDDAKIYFLQILSAVKHL 231
F + + E E G I +V E G Y+ I G L D + QI +V L
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 232 HDRDIIHRDIKAENVFL 248
H + H D+K EN+
Sbjct: 135 HSNKLTHTDLKPENILF 151
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 135 YEVLET-----FGKIFLVVEYASGGE----------------LYNKITTEGRLSEDDAKI 173
YE+++T FGK+ +++ +GG ++I L+ D
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 174 YFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLS--EDDAKIYFLQILSAVKHL 231
F + + E E G I +V E G Y+ I G L D + QI +V L
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 232 HDRDIIHRDIKAENVFL 248
H + H D+K EN+
Sbjct: 135 HSNKLTHTDLKPENILF 151
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 188 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGNMSPEA---FLQEAQVMKK 236
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 237 LRHEKLVQLYAVV----------------------------SEE---------------- 252
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 253 ---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 305
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G
Sbjct: 306 DLRAANILVGENLVCKVADFGLG 328
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 183 VLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYF-LQILSAVKHLHDRDIIHRDI 241
+L G +++ Y G+L I + R I F LQ+ +++L ++ +HRD+
Sbjct: 91 MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDL 150
Query: 242 KAENVFLSVRGIVKLGDLGFS 262
A N L VK+ D G +
Sbjct: 151 AARNCMLDESFTVKVADFGLA 171
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 11 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 59
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 60 LRHEKLVQLYAVV----------------------------SEE---------------- 75
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I +V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 76 ---PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 128
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 129 DLRAANILVGENLVCKVADFGLA 151
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 187 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 235
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 236 LRHEKLVQLYAVV----------------------------SEE---------------- 251
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 252 ---PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 304
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 270 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 318
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 319 LRHEKLVQLYAVV----------------------------SEE---------------- 334
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY S G L + + E RL + D A QI S + ++ + +HR
Sbjct: 335 ---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA----QIASGMAYVERMNYVHR 387
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 388 DLRAANILVGENLVCKVADFGLA 410
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 60/186 (32%)
Query: 65 YKLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSME 124
Y+L +LGRG +S E++ I T + +KIL P + + REI +E
Sbjct: 39 YQLVRKLGRGKYS-------EVFEAINITNNEKVVVKIL-----KPVKKNKIKREIKILE 86
Query: 125 SVHH-PNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEV 183
++ PNII L ++++ V
Sbjct: 87 NLRGGPNIITLADIVKD-----------------------------------------PV 105
Query: 184 LETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHDRDIIHRDIKA 243
T +F V +LY +T + D + Y +IL A+ + H I+HRD+K
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLT------DYDIRFYMYEILKALDYCHSMGIMHRDVKP 159
Query: 244 ENVFLS 249
NV +
Sbjct: 160 HNVMID 165
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 189 KIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQ-ILSAVKHLHDRDIIHRDIKAENVF 247
++ + EY GG L I + ++ F + I S + +LH +IIHRD+ + N
Sbjct: 81 RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCL 140
Query: 248 LSVRGIVKLGDLGFS 262
+ V + D G +
Sbjct: 141 VRENKNVVVADFGLA 155
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y ++L A+ + H + I+HRD+K NV +
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 189 KIFLVVEYASGGELYN--KITTEGRLSEDDAKIYFLQILSAVKHLH--------DRDIIH 238
+++L+ Y G LY+ ++TT +S L I S + HLH I H
Sbjct: 80 QLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 239 RDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
RD+K++N+ + G + DLG + Q
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y ++L A+ + H + I+HRD+K NV +
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 189 KIFLVVEYASGGELYN--KITTEGRLSEDDAKIYFLQILSAVKHLH--------DRDIIH 238
+++L+ Y G LY+ ++TT +S L I S + HLH I H
Sbjct: 80 QLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 239 RDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
RD+K++N+ + G + DLG + Q
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 189 KIFLVVEYASGGELYN--KITTEGRLSEDDAKIYFLQILSAVKHLH--------DRDIIH 238
+++L+ Y G LY+ ++TT +S L I S + HLH I H
Sbjct: 109 QLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 239 RDIKAENVFLSVRGIVKLGDLGFSTKLQQ 267
RD+K++N+ + G + DLG + Q
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 18 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 66
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 67 LRHEKLVQLYAVV----------------------------SEE---------------- 82
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY + G L + + E RL + D + QI S + ++ + +HR
Sbjct: 83 ---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA----QIASGMAYVERMNYVHR 135
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 136 DLRAANILVGENLVCKVADFGLA 158
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 68/203 (33%)
Query: 66 KLQNELGRGNFSTVKMAIHEIYVPILCTYISYLAIKILDKAKLTPKARKMLSREIVSMES 125
+L+ +LG+G F V M + +AIK L ++P+A +E M+
Sbjct: 18 RLEVKLGQGCFGEVWMGTW--------NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 66
Query: 126 VHHPNIIRLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILLYEVLE 185
+ H +++LY V+ SE+
Sbjct: 67 LRHEKLVQLYAVV----------------------------SEE---------------- 82
Query: 186 TFGKIFLVVEYASGGELYNKITTEG----RLSE--DDAKIYFLQILSAVKHLHDRDIIHR 239
I++V EY + G L + + E RL + D + QI S + ++ + +HR
Sbjct: 83 ---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA----QIASGMAYVERMNYVHR 135
Query: 240 DIKAENVFLSVRGIVKLGDLGFS 262
D++A N+ + + K+ D G +
Sbjct: 136 DLRAANILVGENLVCKVADFGLA 158
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 170
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID 165
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 45/152 (29%)
Query: 119 EIVSMESVHHPNIIRLYEVL-----ETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKI 173
E M+ HPN+IRL V + K +++ + G+L+
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHT--------------- 130
Query: 174 YFLQILLYEVLETFGKIFLVVEYASGGELYNKITTEGRLSEDDAKIYFLQILSAVKHLHD 233
LLY LET K I + L + + I +++L +
Sbjct: 131 ----YLLYSRLETGPK---------------HIPLQTLLK------FMVDIALGMEYLSN 165
Query: 234 RDIIHRDIKAENVFLSVRGIVKLGDLGFSTKL 265
R+ +HRD+ A N L V + D G S K+
Sbjct: 166 RNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 212 LSEDDAKIYFLQILSAVKHLHDRDIIHRDIKAENVFLS 249
L++ D + Y +IL A+ + H I+HRD+K NV +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,497,810
Number of Sequences: 62578
Number of extensions: 292207
Number of successful extensions: 2900
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 682
Number of HSP's gapped (non-prelim): 1934
length of query: 267
length of database: 14,973,337
effective HSP length: 97
effective length of query: 170
effective length of database: 8,903,271
effective search space: 1513556070
effective search space used: 1513556070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)