Query psy258
Match_columns 238
No_of_seqs 148 out of 229
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 19:47:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy258.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/258hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1weya_ d.58.7.1 (A:) Calcipre 99.8 4.1E-20 3E-24 141.8 10.1 99 38-168 5-103 (104)
2 d1nu4a_ d.58.7.1 (A:) Spliceso 99.1 1.7E-10 1.2E-14 84.5 8.7 79 39-143 4-85 (91)
3 d2adca2 d.58.7.1 (A:444-531) P 99.0 1E-09 7.3E-14 79.5 9.5 75 39-141 11-86 (88)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.0 2.8E-10 2E-14 81.2 5.9 73 39-141 3-81 (82)
5 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.0 1.4E-09 1E-13 79.2 9.5 81 31-141 1-85 (90)
6 d2adca1 d.58.7.1 (A:335-443) P 98.9 5E-09 3.6E-13 78.0 11.5 74 39-141 3-77 (109)
7 d1x4ga1 d.58.7.1 (A:8-103) Nuc 98.9 1.5E-09 1.1E-13 80.5 7.4 73 39-141 19-91 (96)
8 d2b0ga1 d.58.7.1 (A:1-83) Spli 98.9 7.6E-09 5.6E-13 74.2 10.4 72 39-140 9-82 (83)
9 d2bz2a1 d.58.7.1 (A:35-113) Ne 98.9 6.6E-09 4.8E-13 74.0 9.7 72 38-141 5-76 (79)
10 d1whxa_ d.58.7.1 (A:) Probable 98.9 4.3E-09 3.1E-13 78.4 9.0 73 39-141 11-83 (111)
11 d2cpxa1 d.58.7.1 (A:291-392) R 98.9 4.7E-09 3.4E-13 77.4 8.9 79 39-141 19-97 (102)
12 d1fxla1 d.58.7.1 (A:37-118) Hu 98.9 4.7E-09 3.4E-13 74.5 8.3 73 39-141 3-81 (82)
13 d2ghpa1 d.58.7.1 (A:116-196) U 98.8 3E-09 2.2E-13 75.6 7.1 73 39-141 2-80 (81)
14 d1x4aa1 d.58.7.1 (A:9-103) Spl 98.8 3E-09 2.2E-13 78.2 6.9 74 38-141 14-90 (95)
15 d1whya_ d.58.7.1 (A:) Putative 98.8 1.3E-08 9.2E-13 75.1 9.9 75 37-141 15-92 (97)
16 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 98.8 1.4E-08 1E-12 74.4 9.8 74 38-141 7-86 (93)
17 d2cpja1 d.58.7.1 (A:65-150) No 98.8 1.2E-08 8.4E-13 74.0 9.1 75 39-143 9-83 (86)
18 d2cq0a1 d.58.7.1 (A:231-320) E 98.8 6.2E-09 4.5E-13 75.7 7.5 76 38-143 8-89 (90)
19 d2cpza1 d.58.7.1 (A:383-484) C 98.8 1.2E-08 8.5E-13 76.1 9.1 75 39-143 19-99 (102)
20 d2f9da1 d.58.7.1 (A:12-125) Pr 98.8 7.7E-09 5.6E-13 77.8 7.9 74 38-141 7-83 (114)
21 d1u6fa1 d.58.7.1 (A:1-139) RNA 98.8 3.3E-08 2.4E-12 76.8 11.6 77 36-142 40-122 (139)
22 d2cpda1 d.58.7.1 (A:223-308) A 98.8 1.5E-08 1.1E-12 72.8 8.7 73 39-141 9-81 (86)
23 d1x4da1 d.58.7.1 (A:8-96) Matr 98.8 1.5E-08 1.1E-12 74.1 8.7 77 36-141 6-84 (89)
24 d2cqha1 d.58.7.1 (A:2-81) IGF- 98.8 5.3E-09 3.8E-13 74.8 6.1 73 39-141 2-75 (80)
25 d2cqba1 d.58.7.1 (A:1-89) Pept 98.8 5.5E-09 4E-13 75.8 6.3 74 38-141 5-84 (89)
26 d2cpea1 d.58.7.1 (A:353-453) R 98.7 1.6E-08 1.1E-12 74.2 8.4 84 38-143 8-97 (101)
27 d1x5sa1 d.58.7.1 (A:8-97) Cold 98.7 1.4E-08 1E-12 73.4 7.5 75 38-142 5-85 (90)
28 d2adba1 d.58.7.1 (A:177-284) P 98.7 5.8E-08 4.2E-12 72.7 10.5 74 40-141 9-84 (108)
29 d1x5ta1 d.58.7.1 (A:8-90) Spli 98.7 2.7E-08 1.9E-12 70.9 8.2 75 41-142 1-79 (83)
30 d1x4fa1 d.58.7.1 (A:8-106) Mat 98.7 6.4E-08 4.7E-12 71.8 10.6 76 36-141 16-94 (99)
31 d1wg1a_ d.58.7.1 (A:) Probable 98.7 1.4E-08 1.1E-12 73.8 6.7 74 38-142 5-78 (88)
32 d2cq3a1 d.58.7.1 (A:110-202) R 98.7 6.3E-08 4.6E-12 70.7 9.8 76 36-141 9-88 (93)
33 d1p1ta_ d.58.7.1 (A:) Cleavage 98.7 5.6E-08 4.1E-12 72.0 9.5 73 39-141 9-87 (104)
34 d1wexa_ d.58.7.1 (A:) Heteroge 98.7 7.7E-08 5.6E-12 71.6 10.1 74 38-141 15-90 (104)
35 d1wi6a1 d.58.7.1 (A:69-143) Ri 98.6 7.7E-08 5.6E-12 67.9 8.8 71 41-142 1-71 (75)
36 d1x5ua1 d.58.7.1 (A:7-99) Spli 98.6 1.2E-07 8.7E-12 69.3 10.0 73 39-141 10-88 (93)
37 d2cpha1 d.58.7.1 (A:454-547) P 98.6 1.6E-07 1.2E-11 68.7 10.6 76 36-141 6-89 (94)
38 d2cq1a1 d.58.7.1 (A:51-138) Po 98.6 7.9E-08 5.8E-12 69.3 8.5 73 39-141 9-83 (88)
39 d1whwa_ d.58.7.1 (A:) Probable 98.6 3.1E-08 2.3E-12 73.0 6.3 75 38-142 8-88 (99)
40 d1rk8a_ d.58.7.1 (A:) RNA-bind 98.6 6.2E-08 4.5E-12 70.1 7.6 73 39-141 8-86 (88)
41 d1no8a_ d.58.7.1 (A:) Nuclear 98.6 1.2E-07 8.7E-12 67.0 9.0 72 40-141 2-78 (78)
42 d1cvja1 d.58.7.1 (A:11-90) Pol 98.6 6.5E-08 4.8E-12 68.7 7.4 72 40-141 2-79 (80)
43 d1cvja2 d.58.7.1 (A:91-179) Po 98.6 6.1E-08 4.4E-12 70.2 7.2 73 39-141 9-85 (89)
44 d1x4ha1 d.58.7.1 (A:8-105) RNA 98.6 7.4E-08 5.4E-12 70.0 7.7 75 38-142 8-94 (98)
45 d2cqca1 d.58.7.1 (A:109-191) A 98.6 7.4E-08 5.4E-12 68.6 7.5 68 39-136 10-83 (83)
46 d1wf2a_ d.58.7.1 (A:) Heteroge 98.6 7.3E-08 5.3E-12 71.4 7.4 75 36-141 13-87 (98)
47 d3begb1 d.58.7.1 (B:121-207) S 98.5 1.1E-07 7.9E-12 68.6 7.7 72 39-141 1-72 (87)
48 d1fjeb1 d.58.7.1 (B:1-91) Nucl 98.5 8.1E-08 5.9E-12 70.2 6.3 78 38-141 13-90 (91)
49 d2cpia1 d.58.7.1 (A:101-189) E 98.5 7.3E-08 5.3E-12 70.0 5.7 73 38-137 8-89 (89)
50 d2dita1 d.58.7.1 (A:8-106) HIV 98.5 1.4E-07 1E-11 70.1 7.4 63 81-143 32-96 (99)
51 d2ghpa3 d.58.7.1 (A:206-291) U 98.5 2.1E-07 1.5E-11 66.9 8.0 74 38-141 4-84 (86)
52 d2u2fa_ d.58.7.1 (A:) Splicing 98.5 4.5E-07 3.3E-11 65.1 9.8 73 39-141 2-80 (85)
53 d1b7fa2 d.58.7.1 (A:205-289) S 98.5 4.1E-07 3E-11 65.0 9.1 71 39-139 7-85 (85)
54 d2cpfa1 d.58.7.1 (A:362-446) P 98.5 1.7E-07 1.3E-11 66.8 7.1 71 41-141 1-80 (85)
55 d1wg4a_ d.58.7.1 (A:) Splicing 98.5 2.2E-07 1.6E-11 68.7 7.8 73 38-141 15-87 (98)
56 d2msta_ d.58.7.1 (A:) Neural R 98.4 2.8E-07 2.1E-11 63.8 7.5 74 41-139 2-75 (75)
57 d1fxla2 d.58.7.1 (A:119-203) H 98.4 7E-07 5.1E-11 63.9 9.3 71 39-139 7-85 (85)
58 d1fjca_ d.58.7.1 (A:) Nucleoli 98.4 1.6E-07 1.2E-11 68.8 5.7 77 38-143 16-92 (96)
59 d1x5oa1 d.58.7.1 (A:8-108) RNA 98.4 2.2E-07 1.6E-11 68.7 6.1 76 36-141 16-96 (101)
60 d2cqpa1 d.58.7.1 (A:917-1002) 98.4 2.7E-07 2E-11 65.8 5.8 75 38-139 9-86 (86)
61 d1o0pa_ d.58.7.1 (A:) Splicing 98.3 4.2E-06 3.1E-10 62.1 11.6 61 81-141 27-95 (104)
62 d2ghpa2 d.58.7.1 (A:41-115) U4 98.3 4.6E-07 3.4E-11 63.8 5.7 69 39-138 1-73 (75)
63 d2cq2a1 d.58.7.1 (A:25-125) Al 98.3 1.3E-06 9.5E-11 65.0 8.2 62 39-130 19-82 (101)
64 d1wi8a_ d.58.7.1 (A:) Eukaryot 98.2 1.5E-06 1.1E-10 63.9 7.4 73 38-142 15-94 (104)
65 d1x4ba1 d.58.7.1 (A:8-110) Het 98.2 1.9E-06 1.4E-10 64.3 7.7 72 39-141 21-98 (103)
66 d1wf0a_ d.58.7.1 (A:) TAR DNA- 98.2 9.5E-07 6.9E-11 63.6 5.7 74 37-142 4-78 (88)
67 d2disa1 d.58.7.1 (A:8-103) Hyp 98.2 6.6E-06 4.8E-10 59.7 9.9 75 40-143 3-86 (96)
68 d2cpya1 d.58.7.1 (A:536-638) R 98.2 3E-06 2.2E-10 62.2 7.9 76 38-141 8-86 (103)
69 d1uawa_ d.58.7.1 (A:) Musashi- 98.2 2E-06 1.5E-10 60.7 6.5 69 40-139 2-76 (77)
70 d1x4ea1 d.58.7.1 (A:8-79) RNA- 98.1 1.1E-06 8E-11 60.6 4.6 65 41-135 1-71 (72)
71 d2cq4a1 d.58.7.1 (A:132-232) R 98.1 2.9E-06 2.1E-10 62.9 6.7 72 39-141 19-96 (101)
72 d2cqga1 d.58.7.1 (A:96-185) TA 98.1 6.3E-06 4.6E-10 59.8 8.3 73 37-141 7-85 (90)
73 d2cqda1 d.58.7.1 (A:1-103) RNA 98.1 1E-05 7.4E-10 59.7 9.0 72 39-141 11-88 (103)
74 d1l3ka2 d.58.7.1 (A:103-181) N 98.0 1.5E-05 1.1E-09 55.5 7.8 70 39-139 3-78 (79)
75 d1zh5a2 d.58.7.1 (A:105-189) L 97.9 1.7E-05 1.2E-09 56.6 7.5 71 39-140 7-82 (85)
76 d1u2fa_ d.58.7.1 (A:) Splicing 97.9 1.2E-06 8.5E-11 63.0 1.1 78 40-137 3-80 (90)
77 d1jmta_ d.58.7.3 (A:) d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=4.1e-20 Score=141.76 Aligned_cols=99 Identities=37% Similarity=0.718 Sum_probs=90.0
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
.++|||+||++++|..+.++++|+.||+ .||.++++..+|++++++|.|.+.++|
T Consensus 5 ~~~L~v~nl~~~v~~~d~~k~~l~~lF~-------------------------~~G~i~~~~~~k~~~~afV~f~~~~~A 59 (104)
T d1weya_ 5 SSGLIACVANDDVFSESETRAKFESLFR-------------------------TYDKDTTFQYFKSFKRVRINFSNPLSA 59 (104)
T ss_dssp CCEEEEECCCGGGGSTTTHHHHHHHHHH-------------------------TTCSSCEEEEETTTTEEEEECSSTTHH
T ss_pred CceEEEEeCCchhcCcHHHHHHHHHHhc-------------------------ccccceEEEEecCCCEEEEEECCHHHH
Confidence 5799999999999999999999999999 557788999999999999999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCCCCCCCCCCCccCCCCCCcceeeCCCCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQPMTPFDSADQHLQPPAPTKQFLISPPSS 168 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~~t~~~~~~~~L~~P~~~K~FLISPP~S 168 (238)
.+|+..|++..|+|+.|+|+||++... .+.++++|.+.+ |||+|
T Consensus 60 ~~Ai~~lng~~~~g~~l~v~~a~~~~~---~~~~~~pP~~~~----sPP~s 103 (104)
T d1weya_ 60 ADARLRLHKTEFLGKEMKLYFAQTLHI---GSSHLAPPNPDK----SGPSS 103 (104)
T ss_dssp HHHHHTSTTSEETTEECEEECCCCSSC---CSCCSCCCCCCC----CCCCC
T ss_pred HHHHHHhcccccCCCEeEEeecccCCC---CCcccCCCCCCC----CccCC
Confidence 999999999999999999999987433 577899999887 68776
No 2
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=1.7e-10 Score=84.46 Aligned_cols=79 Identities=19% Similarity=0.313 Sum_probs=66.1
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC---CCCeEEEEeCCHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK---SFRRMRVNYESSA 115 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk---SF~RiiVVF~~~e 115 (238)
+||||.|||..+-. ++|++.|+.+|++||++ ..+...+ +.|-++|.|.+.+
T Consensus 4 ~tl~V~nLp~~~t~-~dl~~~l~~~f~~~G~i-------------------------~~i~~~~~~~~~g~afV~F~~~~ 57 (91)
T d1nu4a_ 4 HTIYINNLNEKIKK-DELKKSLHAIFSRFGQI-------------------------LDILVSRSLKMRGQAFVIFKEVS 57 (91)
T ss_dssp SEEEEESCCTTSCH-HHHHHHHHHHHGGGSCE-------------------------EEEECCHHHHHTTCEEEEESSHH
T ss_pred CEEEEeCCCCCCCH-HHHHHHHHHHhcccccc-------------------------cceEEeeeccCCCceEEEECCHH
Confidence 49999999988766 78999999999977664 3333322 3467999999999
Q ss_pred HHHHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 116 AAAKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 116 aA~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
+|..|+..+++..|.|+.++|.||++.+
T Consensus 58 ~A~~A~~~~~~~~~~g~~l~v~~ak~~~ 85 (91)
T d1nu4a_ 58 SATNALRSMQGFPFYDKPMRIQYAKTDS 85 (91)
T ss_dssp HHHHHHHHHTTCEETTEECEEEECSSCC
T ss_pred HHHHHHHHhCCCEECCEEEEEEEeCCCc
Confidence 9999999999999999999999998744
No 3
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=1e-09 Score=79.49 Aligned_cols=75 Identities=21% Similarity=0.299 Sum_probs=58.2
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
+||+|+||+..+=+ +.|+.+|++||++. .+.+..=++.+-++|.|.+.++|.
T Consensus 11 ~tL~V~NLp~~~te-----~~l~~~F~~~G~v~-----------------------~~~~~~~~~~~~afV~f~~~~~A~ 62 (88)
T d2adca2 11 ATLHLSNIPPSVSE-----EDLKVLFSSNGGVV-----------------------KGFKFFQKDRKMALIQMGSVEEAV 62 (88)
T ss_dssp SEEEEECCCTTCCH-----HHHHHHHHTTSCCE-----------------------EEEEECSSSTTCEEEEESSHHHHH
T ss_pred CEEEEECCCCCCCH-----HHHHHHhhccCCEE-----------------------EEEEeeecccceeEEEECCHHHHH
Confidence 49999999987543 35668888676644 112222245678999999999999
Q ss_pred HHHHHhcCCccC-CcceEEEEeCC
Q psy258 119 KARINLHQSVFA-SSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~-g~~lrIyFAq~ 141 (238)
+|+..|++..+. |..|+|.||++
T Consensus 63 ~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 63 QALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp HHHHHHTTCBSSSSCBCEEEECSS
T ss_pred HHHHhccCCEecCCCEEEEEeCCC
Confidence 999999999875 78999999986
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.98 E-value=2.8e-10 Score=81.21 Aligned_cols=73 Identities=18% Similarity=0.355 Sum_probs=58.1
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
+||||.|||..+-+ +.|+.+|++||+ +..+...+ +.+-++|.|.
T Consensus 3 t~l~V~nLp~~~t~-----~~l~~~F~~~G~-------------------------v~~~~i~~~~~~g~~~g~afV~f~ 52 (82)
T d1b7fa1 3 TNLIVNYLPQDMTD-----RELYALFRAIGP-------------------------INTCRIMRDYKTGYSYGYAFVDFT 52 (82)
T ss_dssp SEEEEECCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEECCEETTTTEECSEEEEEES
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHHhCC-------------------------cceeeeeeecccCCccccceEEEC
Confidence 68999999987654 346678886655 44443332 2346999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|.+.|++..+.|+.|+|.||++
T Consensus 53 ~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 53 SEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp SHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 99999999999999999999999999986
No 5
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=1.4e-09 Score=79.24 Aligned_cols=81 Identities=22% Similarity=0.303 Sum_probs=62.8
Q ss_pred ccCCCCCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC----CCe
Q psy258 31 LINDEQLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS----FRR 106 (238)
Q Consensus 31 ~~~~~~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS----F~R 106 (238)
||.++.-|.||||.|||..+=+ +.|+.+|++|| ++..+...+. -+-
T Consensus 1 mm~d~~~~~tl~V~nLp~~~te-----~~l~~~F~~~G-------------------------~i~~v~i~~d~~~~~~~ 50 (90)
T d2cqia1 1 MMEDDGQPRTLYVGNLSRDVTE-----VLILQLFSQIG-------------------------PCKSCKMITEHTSNDPY 50 (90)
T ss_dssp CCCCSCCCCEEEEESCCTTCCH-----HHHHHHHHHHS-------------------------CEEEEEEECCCCSSCCE
T ss_pred CCCCCCCCCEEEEECCCCCCCH-----HHHHHHHHhcC-------------------------CceeeeeecccCcccee
Confidence 4455555789999999986544 45667888555 4555544332 245
Q ss_pred EEEEeCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 107 MRVNYESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 107 iiVVF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.|.+.++|.+|...+++..+.|+.|+|.||++
T Consensus 51 afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 51 CFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp EEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred eEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 99999999999999999999999999999999976
No 6
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=5e-09 Score=77.97 Aligned_cols=74 Identities=18% Similarity=0.265 Sum_probs=60.4
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCC-CeEEEEeCCHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSF-RRMRVNYESSAAA 117 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF-~RiiVVF~~~eaA 117 (238)
+||+|.||++.--. .+.|+.+|+ .||.+..+..++.- |.++|.|.+.++|
T Consensus 3 ~~l~V~nL~p~~~t----e~~L~~~F~-------------------------~fG~I~~v~i~~~~kg~afV~f~~~~~A 53 (109)
T d2adca1 3 SVLLVSNLNPERVT----PQSLFILFG-------------------------VYGDVQRVKILFNKKENALVQMADGNQA 53 (109)
T ss_dssp SEEEEESCCTTTCC----HHHHHHHHH-------------------------HHTCEEEEEECCTTSCCEEEEESCHHHH
T ss_pred CEEEEeCCCcccCC----HHHHHHHHh-------------------------hccccceEEEEecccceEEEEECCHHHH
Confidence 68999999764222 235678888 55667777777654 5799999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+|+..|++..|.|+.|+|.|++.
T Consensus 54 ~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 54 QLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp HHHHHHHTTCBCSSSBCEEECCSC
T ss_pred HHHHHHhCCCEECCEEEEEEECCC
Confidence 999999999999999999999875
No 7
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=1.5e-09 Score=80.48 Aligned_cols=73 Identities=12% Similarity=0.227 Sum_probs=63.1
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
.||+|.||+..+-+ +.|+.+|+ .||++.++...+..|-++|.|.+.++|.
T Consensus 19 ~~l~v~nL~~~~te-----~~L~~~F~-------------------------~fG~i~~v~i~~~kg~afV~f~~~~~A~ 68 (96)
T d1x4ga1 19 CTVYCGGIASGLTD-----QLMRQTFS-------------------------PFGQIMEIRVFPEKGYSFVRFSTHESAA 68 (96)
T ss_dssp CEEEEECCSSCCCH-----HHHHHHHH-------------------------HHSCEEEEEEETTTTEEEEEESSHHHHH
T ss_pred CEEEEcCCCCCCCH-----HHHHHHHH-------------------------HhCCceEEEEEecceEEEEEECCHHHHH
Confidence 48999999987643 34667788 5566778888888889999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.|+..|++..++|..|+|.||++
T Consensus 69 ~Ai~~l~~~~i~g~~l~v~~ak~ 91 (96)
T d1x4ga1 69 HAIVSVNGTTIEGHVVKCYWGKE 91 (96)
T ss_dssp HHHHHHTTCEETTEECEEECCCC
T ss_pred HHHHHhCCCEECCEEEEEEEcCC
Confidence 99999999999999999999987
No 8
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.88 E-value=7.6e-09 Score=74.16 Aligned_cols=72 Identities=17% Similarity=0.234 Sum_probs=57.9
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCC-CeEEEEeCCHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSF-RRMRVNYESSAAA 117 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF-~RiiVVF~~~eaA 117 (238)
+||+|+||+..+-. +.|+.+|++| |++.++..++.- +-++|.|.+.++|
T Consensus 9 ~tl~V~nLp~~~t~-----~~l~~~f~~~-------------------------G~i~~v~~~~~~~g~afV~f~~~~~A 58 (83)
T d2b0ga1 9 QILFLTNLPEETNE-----MMLSMLFNQF-------------------------PGFKEVRLVPNRHDIAFVEFTTELQS 58 (83)
T ss_dssp SEEEEESCCTTCCH-----HHHHHHHTTS-------------------------TTEEEEEECTTTCSCEEEEESSHHHH
T ss_pred CEEEEECCCCCCCH-----HHHHhhhccC-------------------------ccEEEeeeecccceeEEEecCCHHHH
Confidence 39999999987644 3566788844 566666666644 4699999999999
Q ss_pred HHHHHHhcCCccC-CcceEEEEeC
Q psy258 118 AKARINLHQSVFA-SSKINVYFVQ 140 (238)
Q Consensus 118 ~~Ar~~L~~~~f~-g~~lrIyFAq 140 (238)
..|+..|++..|. |..|+|.||+
T Consensus 59 ~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 59 NAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp HHHHHHHTTCBSSTTCBCEEEECC
T ss_pred HHHHHHhCCcEeCCCcEEEEEEec
Confidence 9999999998885 5789999986
No 9
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=6.6e-09 Score=73.97 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=61.0
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
.+||||.|++ + . .+.|+.+|++| |++..+...+..+.++|.|.+.++|
T Consensus 5 ~~ti~V~~~~--~-t----e~~L~~~F~~~-------------------------G~I~~v~~~~~~~~afV~f~~~~~A 52 (79)
T d2bz2a1 5 GNTLYVYGED--M-T----PTLLRGAFSPF-------------------------GNIIDLSMDPPRNCAFVTYEKMESA 52 (79)
T ss_dssp CCEEEEECSS--C-C----HHHHHHHHSTT-------------------------CCCSCEEEETTTTEEEEECSSHHHH
T ss_pred CCEEEEECCC--C-C----HHHHHHHHhcc-------------------------CccceeeeccCCCEEEEEEcccHHH
Confidence 3699999996 2 2 24677888855 5566677778889999999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
..|...|++..+.|+.|+|.||++
T Consensus 53 ~~Ai~~lng~~~~g~~l~V~~a~~ 76 (79)
T d2bz2a1 53 DQAVAELNGTQVESVQLKVNIARK 76 (79)
T ss_dssp HHHHHHHTTCBCSSCBCEEEECCS
T ss_pred HHHHHHhCCCEECCEEEEEEEecC
Confidence 999999999999999999999986
No 10
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.87 E-value=4.3e-09 Score=78.44 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=61.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
+||||.|||..+-. +.|+.+|++| |++..+..-++.+-++|.|.+.++|.
T Consensus 11 ~~l~V~nLp~~~t~-----~~L~~~F~~f-------------------------G~I~~v~l~~~kg~afV~f~~~~~A~ 60 (111)
T d1whxa_ 11 TVILAKNLPAGTLA-----AEIQETFSRF-------------------------GSLGRVLLPEGGITAIVEFLEPLEAR 60 (111)
T ss_dssp EEEEEESCCTTCCH-----HHHHHHHHTT-------------------------SCEEEEECCSSSSCEEEEESCHHHHH
T ss_pred CEEEEECCCCCCCH-----HHHHhhhhcc-------------------------CCccEEEeeccCceEEEEEcCHHHHH
Confidence 59999999976444 3466788855 55666776778889999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+|+..|++..|.|+.|+|.|+..
T Consensus 61 ~A~~~lng~~~~gr~l~v~~a~~ 83 (111)
T d1whxa_ 61 KAFRHLAYSKFHHVPLYLEWAPI 83 (111)
T ss_dssp HHHHHHTTCBSSSSBCEEEEEET
T ss_pred HHHHHHcCCccCCCeEEEEECCC
Confidence 99999999999999999999976
No 11
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=4.7e-09 Score=77.38 Aligned_cols=79 Identities=14% Similarity=0.127 Sum_probs=61.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
+||||.|||..+=. +.|+.+|++||++. ..--...-..-++.+-++|.|.+.++|.
T Consensus 19 ~tl~V~nLp~~~t~-----~~l~~~f~~~G~v~-------------------~~~~~~~~~~g~~~g~~fV~f~~~~~A~ 74 (102)
T d2cpxa1 19 KVLYLKNLSPRVTE-----RDLVSLFARFQEKK-------------------GPPIQFRMMTGRMRGQAFITFPNKEIAW 74 (102)
T ss_dssp SEEEEECCCTTCCH-----HHHHHHTHHHHHSS-------------------SSCCEEEEECSSSCSEEEEECSSHHHHH
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHhhcccee-------------------eEEeecccccccccccceEEeccHHHHH
Confidence 59999999986543 45678999888865 1111112223356677999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.|+..|++..|.|+.|+|.||++
T Consensus 75 ~Ai~~l~g~~~~g~~l~V~~ak~ 97 (102)
T d2cpxa1 75 QALHLVNGYKLYGKILVIEFGKN 97 (102)
T ss_dssp HHHHHSTTCBCSSCBCEEEECCC
T ss_pred HHHHHhCCCEECCEEEEEEeCCC
Confidence 99999999999999999999987
No 12
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=4.7e-09 Score=74.49 Aligned_cols=73 Identities=25% Similarity=0.379 Sum_probs=57.6
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
+||||.|||..+=+ +.|+.+|++||+ +..+...+ +.|-++|.|.
T Consensus 3 t~l~V~nLp~~~te-----~~l~~~f~~~G~-------------------------v~~v~i~~~~~~~~~~g~afv~f~ 52 (82)
T d1fxla1 3 TNLIVNYLPQNMTQ-----EEFRSLFGSIGE-------------------------IESCKLVRDKITGQSLGYGFVNYI 52 (82)
T ss_dssp SEEEEESCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred CEEEEECCCCCCCH-----HHHHHHHHHhCC-------------------------cccccceeeccCCCceeeEEEEEC
Confidence 57999999986544 346677886654 44444432 2235999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|+..|++..|.|+.|+|.||++
T Consensus 53 ~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 53 DPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 99999999999999999999999999987
No 13
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.84 E-value=3e-09 Score=75.61 Aligned_cols=73 Identities=19% Similarity=0.149 Sum_probs=57.3
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec------CCCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL------KSFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L------kSF~RiiVVF~ 112 (238)
.||||.|||..+=+ +.|+.+|++||.+. ....+ ++.|-++|.|.
T Consensus 2 ~tl~v~nLp~~~t~-----~~l~~~f~~~G~v~-------------------------~~~~~~~~~~~~~~g~afV~f~ 51 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQ-----RNIRDLLQDINVVA-------------------------LSIRLPSLRFNTSRRFAYIDVT 51 (81)
T ss_dssp CEEEEECCCTTCCH-----HHHHHHHHHTTCCC-------------------------CEEECC-------CCEEEEECS
T ss_pred cEEEEECCCCcCCH-----HHHHHHHHHhCcEE-------------------------eeeeecccccccccceeEEEEC
Confidence 38999999987654 35667888776653 22222 23455999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|.+.|++..|.|+.|+|.||+|
T Consensus 52 ~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 52 SKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 99999999999999999999999999987
No 14
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83 E-value=3e-09 Score=78.19 Aligned_cols=74 Identities=18% Similarity=0.266 Sum_probs=58.5
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC---CCCeEEEEeCCH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK---SFRRMRVNYESS 114 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk---SF~RiiVVF~~~ 114 (238)
..+|||.|||..+-. +.|+.+|++||. +..+...+ +.+-++|.|.+.
T Consensus 14 ~~~l~V~nLp~~~t~-----~~l~~~F~~~G~-------------------------v~~~~~~~~~~~~g~afV~f~~~ 63 (95)
T d1x4aa1 14 DCRIYVGNLPPDIRT-----KDIEDVFYKYGA-------------------------IRDIDLKNRRGGPPFAFVEFEDP 63 (95)
T ss_dssp SSEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEECCSSSSSCCEEEEESCH
T ss_pred CCEEEEECCCCCCCH-----HHHHHHHhcCCc-------------------------eEEEEecccccccceEEEEECCH
Confidence 358999999987544 356678886655 44444333 234599999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|..|+..|++..|.|+.|+|.||++
T Consensus 64 e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 64 RDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp HHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred HHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 999999999999999999999999986
No 15
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.81 E-value=1.3e-08 Score=75.11 Aligned_cols=75 Identities=20% Similarity=0.295 Sum_probs=63.1
Q ss_pred CC-CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHH
Q psy258 37 LP-KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSA 115 (238)
Q Consensus 37 ~p-~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~e 115 (238)
.| +||||.||+..+-+ +.|+++|+ .||.+..+...+..+.++|.|.+.+
T Consensus 15 ~Ps~tl~V~nLp~~~t~-----~~l~~~f~-------------------------~~G~i~~~~~~~~~~~afV~f~~~~ 64 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSL-----AALAREFD-------------------------RFGSIRTIDHVKGDSFAYIQYESLD 64 (97)
T ss_dssp CCCSCEEEECCCSSCCH-----HHHHHHHH-------------------------TTSCEEEEEECSSSCCEEEEESSHH
T ss_pred CCCCEEEEcCCCCCCCH-----HHHHHHHH-------------------------hhcccceEeeeccccEEEeccCCHH
Confidence 45 69999999987533 35667777 5566778888888899999999999
Q ss_pred HHHHHHHHhcCCccCC--cceEEEEeCC
Q psy258 116 AAAKARINLHQSVFAS--SKINVYFVQP 141 (238)
Q Consensus 116 aA~~Ar~~L~~~~f~g--~~lrIyFAq~ 141 (238)
+|.+|+..|++..|.+ .+++|.||++
T Consensus 65 ~A~~A~~~l~~~~i~g~~~~l~v~~ak~ 92 (97)
T d1whya_ 65 AAQAACAKMRGFPLGGPDRRLRVDFAKS 92 (97)
T ss_dssp HHHHHHHHHTTCBCSSSSCBCEEEECCC
T ss_pred HHHHHHHHhCCCEeCCCceEEEEEeCCC
Confidence 9999999999998876 4799999987
No 16
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.80 E-value=1.4e-08 Score=74.45 Aligned_cols=74 Identities=23% Similarity=0.111 Sum_probs=58.1
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC--C----CeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS--F----RRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS--F----~RiiVVF 111 (238)
.+||||.|||..+=+ +.|+.+|++||+ +.++...+. - |=++|.|
T Consensus 7 s~tlfV~nlp~~~te-----~~l~~~F~~~G~-------------------------i~~v~i~~~~~~~~~kg~afV~f 56 (93)
T d1h2vz_ 7 SCTLYVGNLSFYTTE-----EQIYELFSKSGD-------------------------IKKIIMGLDKMKKTACGFCFVEY 56 (93)
T ss_dssp CCEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTCCEEEEEEEEE
T ss_pred CCEEEEeCCCCCCCH-----HHHHHHHHHHCC-------------------------cceeccccccccccccceEEEEE
Confidence 579999999986533 456788886654 544444332 1 2399999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+.++|..|.+.|++..+.|+.|+|.|+..
T Consensus 57 ~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~~ 86 (93)
T d1h2vz_ 57 YSRADAENAMRYINGTRLDDRIIRTDWDAG 86 (93)
T ss_dssp SSHHHHHHHHHHTTTSEETTEECEEEEESC
T ss_pred CCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 999999999999999999999999999865
No 17
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.80 E-value=1.2e-08 Score=73.99 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=62.9
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
++|||.|||..+-. +.|+.+|++| |.+.++...+.-+-++|.|.+.++|.
T Consensus 9 ~~l~V~nLp~~~~~-----~~l~~~F~~~-------------------------G~i~~i~~~~~k~~afV~f~~~~~A~ 58 (86)
T d2cpja1 9 SRLFVGNLPPDITE-----EEMRKLFEKY-------------------------GKAGEVFIHKDKGFGFIRLETRTLAE 58 (86)
T ss_dssp TEEEEESCCTTCCH-----HHHHHHTSTT-------------------------CCCSEEEEETTTTEEEEECSSSHHHH
T ss_pred CEEEEECCCCCCCH-----HHHHHHHHHh-------------------------CCceEeeeecccceEEEEECCHHHHH
Confidence 58999999986544 3566788855 55666677788889999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCCCC
Q psy258 119 KARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
.|...|++..|.|+.|+|.||.+..
T Consensus 59 ~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 59 IAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp HHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred HHHHHhCCCEECCEEEEEEECCCcC
Confidence 9999999999999999999998743
No 18
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=6.2e-09 Score=75.72 Aligned_cols=76 Identities=20% Similarity=0.265 Sum_probs=59.3
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC------CCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS------FRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS------F~RiiVVF 111 (238)
.+||||.||+..+=+ +.|+.+|++||+ +..+...+. .|=++|.|
T Consensus 8 ~~~i~V~nLp~~~t~-----~~l~~~f~~~G~-------------------------v~~v~i~~d~~t~~~rg~afV~f 57 (90)
T d2cq0a1 8 NATIRVTNLSEDTRE-----TDLQELFRPFGS-------------------------ISRIYLAKDKTTGQSKGFAFISF 57 (90)
T ss_dssp SEEEEEESCCTTCCH-----HHHHTTSTTTCC-------------------------EEEEEEEECSSSCSEEEEEEEEE
T ss_pred CCEEEEECCCCCCCH-----HHHHHHHHHhcc-------------------------cccccccccccccccccceeEEE
Confidence 469999999987555 356677885654 444444332 22489999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
.+.++|.+|...|++..|.|+.++|.||++.+
T Consensus 58 ~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~~ 89 (90)
T d2cq0a1 58 HRREDAARAIAGVSGFGYDHLILNVEWAKPST 89 (90)
T ss_dssp SSHHHHHHHHHHTTTCEETTEECEEEESSCCC
T ss_pred CCHHHHHHHHHHhCCCEECCEEEEEEeeeCCC
Confidence 99999999999999999999999999999844
No 19
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.2e-08 Score=76.07 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=59.2
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec--CCC----CeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL--KSF----RRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L--kSF----~RiiVVF~ 112 (238)
++|||.|||..+-+ +.|+.+|++||. ++++... +.- |-++|.|.
T Consensus 19 ~~l~V~nLp~~~te-----~~l~~~F~~~G~-------------------------i~~~~~~~~~~~g~~kG~afV~f~ 68 (102)
T d2cpza1 19 ANLFIYHLPQEFGD-----QDLLQMFMPFGN-------------------------VVSAKVFIDKQTNLSKCFGFVSYD 68 (102)
T ss_dssp CCEEEESCCSSCCH-----HHHHHHHGGGSC-------------------------CSEEEEEECSSSCSEEEEEEEECS
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHhhcc-------------------------ccccceeeecccCCCccceEEEeC
Confidence 58999999987754 356678886655 4444333 222 35999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
+.++|..|...|++..|.|+.|+|.||++.+
T Consensus 69 ~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k~ 99 (102)
T d2cpza1 69 NPVSAQAAIQSMNGFQIGMKRLKVQLKRSKN 99 (102)
T ss_dssp SHHHHHHHHHHHTTCEETTEECEEECCCCSC
T ss_pred CHHHHHHHHHHhCCCEECCEEEEEEEeCCCC
Confidence 9999999999999999999999999998743
No 20
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=7.7e-09 Score=77.76 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=59.1
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec---CCCCeEEEEeCCH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL---KSFRRMRVNYESS 114 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L---kSF~RiiVVF~~~ 114 (238)
..||||.||+..+-. +.|+.+|++||+| ..+... ++-|-++|.|.+.
T Consensus 7 ~r~l~V~nLp~~~te-----~~l~~~F~~~G~v-------------------------~~i~~~~~~~~kG~afV~f~~~ 56 (114)
T d2f9da1 7 NRILYIRNLPYKITA-----EEMYDIFGKYGPI-------------------------RQIRVGNTPETRGTAYVVYEDI 56 (114)
T ss_dssp CSEEEEESCCTTCCH-----HHHHHHHHTTSCE-------------------------EEEEEECSTTTTTEEEEEESSH
T ss_pred CCEEEEECCCCCCCH-----HHHHHHHhhcCCe-------------------------EeecccccCCcCCeEEEEECCH
Confidence 359999999976544 4677889966654 444433 2345699999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|..|...|++..|.|+.|+|.|++.
T Consensus 57 ~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 57 FDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp HHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred HHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 999999999999999999999999865
No 21
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=98.78 E-value=3.3e-08 Score=76.76 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=60.0
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEE
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRV 109 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiV 109 (238)
+..+||||.||+..+-+ +.|+.+|++|| .+.++...+ +.|=++|
T Consensus 40 ~~~~~l~V~nLp~~~te-----~~l~~~F~~~G-------------------------~i~~v~i~~d~~t~~~rg~afV 89 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDE-----VQLRQLFERYG-------------------------PIESVKIVCDRETRQSRGYGFV 89 (139)
T ss_dssp TTTSEEEEESCSTTCCH-----HHHHHHHHHHS-------------------------CEEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCEEEEeCCCCCCCH-----HHHHHHHHhhc-------------------------cccccccccccccccccceeeE
Confidence 44568999999987533 35668888565 455554443 2234999
Q ss_pred EeCCHHHHHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 110 NYESSAAAAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 110 VF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
.|.+.++|.+|+..|++..|.|+.|+|.||+..
T Consensus 90 ~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~~ 122 (139)
T d1u6fa1 90 KFQSGSSAQQAIAGLNGFNILNKRLKVALAASG 122 (139)
T ss_dssp EESSHHHHHHHHHHTTTEECSSCEEEEEESSCC
T ss_pred EECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 999999999999999999999999999999763
No 22
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1.5e-08 Score=72.82 Aligned_cols=73 Identities=22% Similarity=0.198 Sum_probs=59.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
+||||.|||..+-+ + .|+.+|++||.+ .....-++.+-++|.|.+.++|.
T Consensus 9 k~l~V~nLp~~~te-~----~l~~~F~~~g~i-------------------------~~~~~~~~rg~afV~f~~~~~A~ 58 (86)
T d2cpda1 9 KILYVRNLMLSTSE-E----MIEKEFNNIKPG-------------------------AVERVKKIRDYAFVHFSNREDAV 58 (86)
T ss_dssp CEEEEESCCTTCCH-H----HHHHHHHTTSTT-------------------------CEEEEEECSSEEEEEESSHHHHH
T ss_pred CEEEEcCCCCCCCH-H----HHHHhhccccee-------------------------eeEEEccccEEEEEEeCCHHHHH
Confidence 68999999986554 3 456788866553 33334456678999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+|+..|++..+.|+.|+|.||++
T Consensus 59 ~Ai~~l~~~~i~g~~i~V~~akP 81 (86)
T d2cpda1 59 EAMKALNGKVLDGSPIEVTLAKP 81 (86)
T ss_dssp HHHHHHSSEEETTEEEEEECCCC
T ss_pred HHHHHcCCCEECCEEEEEEeccC
Confidence 99999999999999999999987
No 23
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.76 E-value=1.5e-08 Score=74.10 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=64.0
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHH
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSA 115 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~e 115 (238)
+-+.+|+|+||+... ..+++|+.||+ .||.+..+..+++.+.++|.|++.+
T Consensus 6 ~~sr~v~v~nl~~~~----~t~~eL~~lF~-------------------------~fG~I~~i~i~~~k~~afV~f~~~~ 56 (89)
T d1x4da1 6 ETRRVVHIMDFQRGK----NLRYQLLQLVE-------------------------PFGVISNHLILNKINEAFIEMATTE 56 (89)
T ss_dssp CCCCEEEEESCCCSS----SHHHHHHTTTG-------------------------GGSCEEEEEECSSSSCEEEEESSHH
T ss_pred CCCcEEEEECCCCCc----CCHHHHHHHHH-------------------------hhCCeEEEEeeccceEEEEEEcchh
Confidence 446799999998632 35667888888 5566888888999999999999999
Q ss_pred HHHHHHHHhc--CCccCCcceEEEEeCC
Q psy258 116 AAAKARINLH--QSVFASSKINVYFVQP 141 (238)
Q Consensus 116 aA~~Ar~~L~--~~~f~g~~lrIyFAq~ 141 (238)
+|..|+..++ +..+.|++++|.||+.
T Consensus 57 ~A~~A~~~l~~~~~~~~gr~l~V~~s~~ 84 (89)
T d1x4da1 57 DAQAAVDYYTTTPALVFGKPVRVHLSQK 84 (89)
T ss_dssp HHHHHHHHHHHSCCEETTEECEEEEECC
T ss_pred hHHHHHHHHhhCCCccCCceEEEEECCC
Confidence 9999999774 5568999999999986
No 24
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=5.3e-09 Score=74.78 Aligned_cols=73 Identities=21% Similarity=0.207 Sum_probs=59.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
|+|||.|||..+-+ +.|+.+|++||.+ .....+++.|-++|.|.+.++|.
T Consensus 2 n~l~V~nLp~~~te-----~~L~~~F~~~G~i-------------------------~~~~~~~~rg~aFV~f~~~~~A~ 51 (80)
T d2cqha1 2 NKLYIGNLSPAVTA-----DDLRQLFGDRKLP-------------------------LAGQVLLKSGYAFVDYPDQNWAI 51 (80)
T ss_dssp CCEEEECCCTTCCH-----HHHHHHHHHTTCC-------------------------CSSCEEEETTEEEECCSCHHHHH
T ss_pred CEEEEECCCCCCCH-----HHHHHHHHHhCcE-------------------------EEeEEecccceEEEEECCHHHHH
Confidence 68999999987643 4666788866654 44445566788999999999999
Q ss_pred HHHHHhcCC-ccCCcceEEEEeCC
Q psy258 119 KARINLHQS-VFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~-~f~g~~lrIyFAq~ 141 (238)
+|+..|++. .+.|+.|+|.||.+
T Consensus 52 ~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 52 RAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp HHHHHHTTTCEETTEECEEEECCC
T ss_pred HHHHHhCCCeEECCEEEEEEEcCC
Confidence 999999985 69999999999987
No 25
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=5.5e-09 Score=75.85 Aligned_cols=74 Identities=20% Similarity=0.234 Sum_probs=58.8
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF 111 (238)
-.||||.|||..+-+ +.|+.+|++||++ .++...+ +.|=++|.|
T Consensus 5 ~~tlfV~nLp~~~te-----~~l~~~F~~~G~i-------------------------~~v~i~~d~~~~~~kg~afV~f 54 (89)
T d2cqba1 5 KRVLYVGGLAEEVDD-----KVLHAAFIPFGDI-------------------------TDIQIPLDYETEKHRGFAFVEF 54 (89)
T ss_dssp CSCEEEESCCSSCCH-----HHHHHHHTTTSCC-------------------------CCEECCCCSSSCCCSSEEEECC
T ss_pred CcEEEEeCCCCcCCH-----HHHHHHHhhCCeE-------------------------EecccccccccccccceeEEEE
Confidence 369999999987643 3566788866654 3433332 334599999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+.++|..|...+++..+.|+.|+|.||++
T Consensus 55 ~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 55 ELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp SSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 999999999999999999999999999987
No 26
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=1.6e-08 Score=74.19 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=61.9
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec------CCCCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL------KSFRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L------kSF~RiiVVF 111 (238)
.+||||.|||..+-+ +.|+.+|++||.+..+ .+......... ++.+=++|.|
T Consensus 8 ~~~i~V~nLp~~~te-----~~l~~~F~~~G~i~~~-----------------~~~~~~~~~~~~d~~~~~~~g~afV~f 65 (101)
T d2cpea1 8 NSAIYVQGLNDSVTL-----DDLADFFKQCGVVKMN-----------------KRTGQPMIHIYLDKETGKPKGDATVSY 65 (101)
T ss_dssp CCEEEEECCCTTCCH-----HHHHHHHTTTSCBCBC-----------------SSSCCBSEECCBCTTTCSBCSEEEEEB
T ss_pred CCEEEEECCCCcCCH-----HHHHHHHHHCceEEEe-----------------eecccceeEEeeccccccccceeeEEe
Confidence 569999999987655 3567899999876311 01111111111 2335599999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
.+.++|..|...|++..|+|+.|+|.+|++..
T Consensus 66 ~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 66 EDPPTAKAAVEWFDGKDFQGSKLKVSLARKKP 97 (101)
T ss_dssp SSHHHHHHHHHHHTTCEETTEECEEECSSCCC
T ss_pred cCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 99999999999999999999999999998743
No 27
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.73 E-value=1.4e-08 Score=73.43 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=59.1
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF 111 (238)
..+|||.|||..+-+ +.|+.+|++||+|. .+...+ +.|=++|.|
T Consensus 5 ~~kifV~nLp~~~t~-----~~l~~~F~~~G~i~-------------------------~~~~~~~~~~~~~~g~afV~f 54 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNE-----QSLEQVFSKYGQIS-------------------------EVVVVKDRETQRSRGFGFVTF 54 (90)
T ss_dssp CSEEEEESCCTTCCH-----HHHHHHHHHHSCCC-------------------------EEEECCCSSSCSCCSEEEEEC
T ss_pred CCEEEEECCCCcCCH-----HHHHHhhhcccccc-------------------------ceeeccccccccccceEEEEE
Confidence 468999999987655 35667888776644 333332 334589999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
.+.++|..|.+.|++..|+|+.|+|.+|.+.
T Consensus 55 ~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~ 85 (90)
T d1x5sa1 55 ENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85 (90)
T ss_dssp SSHHHHHHHHHHHTTCCTTSCCCEEEEEECC
T ss_pred CCHHHHHHHHHHcCCCEECCEEEEEEEcCCC
Confidence 9999999999999999999999999999763
No 28
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=5.8e-08 Score=72.66 Aligned_cols=74 Identities=15% Similarity=0.204 Sum_probs=56.5
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHHH
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAAK 119 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~~ 119 (238)
+|+|.||+..+=+ +.|+.+|++||+|. -+.+..=++-+.++|.|.+.++|++
T Consensus 9 ~v~V~NL~~~vte-----~~L~~~F~~~G~i~-----------------------~~~i~~~~~~g~aFV~f~~~e~A~~ 60 (108)
T d2adba1 9 RIIVENLFYPVTL-----DVLHQIFSKFGTVL-----------------------KIITFTKNNQFQALLQYADPVSAQH 60 (108)
T ss_dssp EEESCSCCSTTHH-----HHHHHHHTTTSCEE-----------------------EEEEEEETTEEEEEEEESCHHHHHH
T ss_pred EEEEeCcCCCCCH-----HHHHHHHccCCcEE-----------------------EEEEEeeCCCCeEEEEECCHHHHHH
Confidence 7889999985433 46778899666543 1222223455679999999999999
Q ss_pred HHHHhcCCccC--CcceEEEEeCC
Q psy258 120 ARINLHQSVFA--SSKINVYFVQP 141 (238)
Q Consensus 120 Ar~~L~~~~f~--g~~lrIyFAq~ 141 (238)
|+..|++..+. +..+++.|++.
T Consensus 61 Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 61 AKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp HHHHHHSCCSSTTCCCCEEEECSS
T ss_pred HHHHHCCCEeccCCcEEEEEecCC
Confidence 99999998874 57899999877
No 29
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=2.7e-08 Score=70.86 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=57.9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEe----cCCCCeEEEEeCCHHH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQY----LKSFRRMRVNYESSAA 116 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~----LkSF~RiiVVF~~~ea 116 (238)
|||.||+..+=+ +.|+.+|++||++. ....+.. -++.|=++|.|.+.++
T Consensus 1 lfV~nLp~~~te-----~~l~~~F~~~G~i~----------------------~~~~i~~~~~~g~~~g~afV~f~~~~~ 53 (83)
T d1x5ta1 1 IFIGNLDPEIDE-----KLLYDTFSAFGVIL----------------------QTPKIMRDPDTGNSKGYAFINFASFDA 53 (83)
T ss_dssp EEEECCCTTCCH-----HHHHHHHHTTSCBS----------------------SCCEECCCTTTCSCCSEEEEEBSSHHH
T ss_pred CEEcCCCCcCcH-----HHHHHHHHHhCcee----------------------eeEEEEeeccccccCceEEEEECCHHH
Confidence 799999986544 45678999887754 1111111 1344569999999999
Q ss_pred HHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 117 AAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 117 A~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
|.+|+..|++..+.|++|+|.+|.+.
T Consensus 54 a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 54 SDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp HHHHHHTTTTCEETTEECEEEESCCC
T ss_pred HHHHHHhCCCcEECCEEEEEEEecCC
Confidence 99999999999999999999999863
No 30
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.70 E-value=6.4e-08 Score=71.77 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=61.3
Q ss_pred CCCCcEEEecCCCC-CCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCH
Q psy258 36 QLPKSLIITNLNPD-LFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESS 114 (238)
Q Consensus 36 ~~p~TLiitnL~~~-vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~ 114 (238)
....+|+|.|||.+ +-+ + .|+.+|+ .||.+..+..+++-+-++|.|.+.
T Consensus 16 ~~~~~l~v~nLp~~~~te-~----~l~~~F~-------------------------~fG~V~~v~~~~~k~~afV~f~~~ 65 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSD-S----AVLKLAE-------------------------PYGKIKNYILMRMKSQAFIEMETR 65 (99)
T ss_dssp CCCCEEEEESCCCSSCCS-H----HHHTTTT-------------------------TTSCCSEEEEETTTTEEEEECSSH
T ss_pred CCCCEEEEeCCcCCccCH-H----HHHhhhc-------------------------cccceeEEEEeecCCcEEEEecch
Confidence 33469999999864 433 3 4556777 556677888889999999999999
Q ss_pred HHHHHHHH--HhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARI--NLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~--~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.+|.. .+++..|.|+.|+|.||+.
T Consensus 66 ~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~ 94 (99)
T d1x4fa1 66 EDAMAMVDHCLKKALWFQGRCVKVDLSEK 94 (99)
T ss_dssp HHHHHHHHHHHHSCCCSSSSCCEEEEECS
T ss_pred HHHHHHHHHHhcCCceECCEEEEEEEcCC
Confidence 99999997 4677789999999999975
No 31
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=1.4e-08 Score=73.76 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=58.7
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
.+||||.|||..+-+ +.|++||++||- ..+.. -++-+-++|.|.+.++|
T Consensus 5 s~~i~V~nLp~~~t~-----~~l~~lF~~~G~------------------------~~~~~--~~~kg~afV~f~~~~~A 53 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNC-----QEVHDLLKDYDL------------------------KYCYV--DRNKRTAFVTLLNGEQA 53 (88)
T ss_dssp CCCEEEESCCSSCCH-----HHHHHHTCSSCC------------------------CCEEE--EGGGTEEEECCSCHHHH
T ss_pred CCEEEEeCCCCccCh-----HHHHHHHHhcCc------------------------eeeee--eccCCceEEEECCHHHH
Confidence 469999999987655 356788887762 11222 23446799999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
.+|...|++..|.|+.|+|.|+++.
T Consensus 54 ~~Ai~~ln~~~~~G~~l~V~~a~~~ 78 (88)
T d1wg1a_ 54 QNAIQMFHQYSFRGKDLIVQLQPTD 78 (88)
T ss_dssp HHHHHHHTTEEETTEEEEEEECCCC
T ss_pred HHHHHHhCCCEECCEEEEEEEcCCC
Confidence 9999999999999999999999763
No 32
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=6.3e-08 Score=70.71 Aligned_cols=76 Identities=29% Similarity=0.347 Sum_probs=60.9
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC----CCCeEEEEe
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK----SFRRMRVNY 111 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk----SF~RiiVVF 111 (238)
.-|++|||.|||..+=+ +.|+.+|++||+ +..+...+ +.+.++|.|
T Consensus 9 ~~~~~l~v~nLp~~~t~-----~~L~~~F~~~G~-------------------------v~~v~~~~~~~~~kg~afV~f 58 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRD-----PDLRQMFGQFGK-------------------------ILDVEIIFNERGSKGFGFVTF 58 (93)
T ss_dssp CCCCEEEEESCCTTCCH-----HHHHHHGGGTSC-------------------------EEEEEEECCTTTTCCEEEEEE
T ss_pred CCCCEEEEECCCCCCCH-----HHHHHHHhhcce-------------------------eeeccccccccCCcceeEEEE
Confidence 44789999999975433 466788886654 44444333 346799999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+.+.|..|...|++..|.|+.|+|.+|++
T Consensus 59 ~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~ 88 (93)
T d2cq3a1 59 ENSADADRAREKLHGTVVEGRKIEVNNATA 88 (93)
T ss_dssp SCHHHHHHHHHHHTTCEETTEECEEEECCS
T ss_pred CCHHHHHHHHHHcCCCEECCEEEEEEecCc
Confidence 999999999999999999999999999987
No 33
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67 E-value=5.6e-08 Score=72.02 Aligned_cols=73 Identities=21% Similarity=0.268 Sum_probs=56.9
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
.||||.||+..+-+ +.|+.+|++||+|. .+...+ +.|=++|.|.
T Consensus 9 rtl~V~nLp~~~te-----~~l~~~f~~~G~i~-------------------------~v~i~~~~~tg~~~g~afV~f~ 58 (104)
T d1p1ta_ 9 RSVFVGNIPYEATE-----EQLKDIFSEVGPVV-------------------------SFRLVYDRETGKPKGYGFCEYQ 58 (104)
T ss_dssp SCEEEESCCTTSCH-----HHHHHHHHTTSCCS-------------------------EEEEEEETTTTEEEEEEEEECS
T ss_pred CEEEEECCCCcCCH-----HHHHHhhhcccccc-------------------------ccccccccceeccCCceEEEEC
Confidence 48999999986543 45667888776644 333322 1233899999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|...|++..|.|..|+|.+|.+
T Consensus 59 ~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 59 DQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp CHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 99999999999999999999999999876
No 34
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.66 E-value=7.7e-08 Score=71.59 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=60.8
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
.++|+|.||+..+=+ +.|+.+|+ .||.+..+..++.-+.++|.|.+.++|
T Consensus 15 s~~l~v~nlp~~~te-----~~l~~~F~-------------------------~fG~I~~~~~~~~k~~AfV~f~~~e~A 64 (104)
T d1wexa_ 15 SPVVHVRGLCESVVE-----ADLVEALE-------------------------KFGTICYVMMMPFKRQALVEFENIDSA 64 (104)
T ss_dssp CSEEEEESCCSSCCH-----HHHHHHHT-------------------------TTSCEEEEEEETTTTEEEEEESSHHHH
T ss_pred CCEEEEeCCCCCCCH-----HHHHHhhh-------------------------hcccceEEEEEecceeEEEEeCCHHHH
Confidence 358999999987544 35667888 556677888888889999999999999
Q ss_pred HHHHHHhcC--CccCCcceEEEEeCC
Q psy258 118 AKARINLHQ--SVFASSKINVYFVQP 141 (238)
Q Consensus 118 ~~Ar~~L~~--~~f~g~~lrIyFAq~ 141 (238)
++|+..+++ ..+.|.+++|.|++.
T Consensus 65 ~~ai~~~~~~~~~~~g~~l~v~~s~~ 90 (104)
T d1wexa_ 65 KECVTFAADVPVYIAGQQAFFNYSTS 90 (104)
T ss_dssp HHHHHHHHHSCCBSSSSBCEEEECSS
T ss_pred HHHHHHHcCCCcEEeeEEEEEEEcCC
Confidence 999998865 457789999999976
No 35
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.63 E-value=7.7e-08 Score=67.91 Aligned_cols=71 Identities=21% Similarity=0.191 Sum_probs=58.2
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHHHH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAAKA 120 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~~A 120 (238)
|||.|||.++-+ +.|+.+|++|| +.....-++-|-++|.|.+.+.|.+|
T Consensus 1 i~V~nLp~~~t~-----~~l~~~F~~~g--------------------------~~~~~~~~~~g~afv~f~~~~~A~~A 49 (75)
T d1wi6a1 1 ILIRGLPGDVTN-----QEVHDLLSDYE--------------------------LKYCFVDKYKGTAFVTLLNGEQAEAA 49 (75)
T ss_dssp EEEECCCTTCCH-----HHHHHHTTTSC--------------------------EEEEEEETTTTEEEEEESSHHHHHHH
T ss_pred CEEeCCCCcCCH-----HHHHHHHhccc--------------------------ccceeecccceeEEEEECCHHHHHHH
Confidence 799999987655 35567888664 33344457778899999999999999
Q ss_pred HHHhcCCccCCcceEEEEeCCC
Q psy258 121 RINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 121 r~~L~~~~f~g~~lrIyFAq~~ 142 (238)
...|++..+.|++|+|.|++..
T Consensus 50 i~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 50 INTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp HHHHTTEESSSCEEEEEECCST
T ss_pred HHHhCCccCCCCEEEEEEeCCC
Confidence 9999999999999999999763
No 36
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=1.2e-07 Score=69.29 Aligned_cols=73 Identities=15% Similarity=0.040 Sum_probs=59.0
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
.||||.|||..+=+ +.|+.+|++| |++.++...+ +.|-++|.|.
T Consensus 10 ~tlfV~nLp~~~t~-----~~l~~~F~~~-------------------------G~v~~v~~~~d~~tg~~kg~afV~f~ 59 (93)
T d1x5ua1 10 ATVYVGGLDEKVSE-----PLLWELFLQA-------------------------GPVVNTHMPKDRVTGQHQGYGFVEFL 59 (93)
T ss_dssp TEEEEECCCTTCCH-----HHHHHHHHTT-------------------------SCEEEEECCBCSSSCSBCSCEEEEES
T ss_pred CEEEEeCCCCcCCH-----HHHHHHHHHh-------------------------CCccccceeecccccccccceEEEEC
Confidence 59999999986633 4566788855 5555555443 3356999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|++.|++..|+|+.|+|.+|.+
T Consensus 60 ~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 60 SEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp SHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred CHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 99999999999999999999999999987
No 37
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.62 E-value=1.6e-07 Score=68.73 Aligned_cols=76 Identities=20% Similarity=0.255 Sum_probs=59.4
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-------CCCeEE
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-------SFRRMR 108 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-------SF~Rii 108 (238)
.-.++|||.|||..+-+ +.|+.+|++||+ +..+...+ +.|-++
T Consensus 6 ~~~~~l~V~nLp~~~~e-----~~l~~~F~~~G~-------------------------i~~v~i~~~~~~~g~~rg~af 55 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQ-----REIRELFSTFGE-------------------------LKTVRLPKKMTGTGAHRGFGF 55 (94)
T ss_dssp SCCCCEEEESCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEECCCCCSSSCSSCSEEE
T ss_pred CCCCEEEEeCCCCCCCH-----HHHHHHHHHhCC-------------------------ceEEEEEeccccCCCcccEEE
Confidence 34579999999986544 346678886654 54444433 345699
Q ss_pred EEeCCHHHHHHHHHHh-cCCccCCcceEEEEeCC
Q psy258 109 VNYESSAAAAKARINL-HQSVFASSKINVYFVQP 141 (238)
Q Consensus 109 VVF~~~eaA~~Ar~~L-~~~~f~g~~lrIyFAq~ 141 (238)
|.|.+.++|.+|...| ++..|.|+.|+|.||+.
T Consensus 56 V~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~ 89 (94)
T d2cpha1 56 VDFITKQDAKKAFNALCHSTHLYGRRLVLEWADS 89 (94)
T ss_dssp EEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCC
T ss_pred EEECCHHHHHHHHHHccCCcEECCEEEEEEEcCC
Confidence 9999999999999998 78899999999999987
No 38
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=7.9e-08 Score=69.27 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=59.9
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
.||||.||+..+-+ +.|+.+|+ .||.+..+...++-+-++|-|.+.++|.
T Consensus 9 ~~l~V~nLp~~~t~-----~~L~~~f~-------------------------~~G~i~~v~~~~~~~~afV~f~~~e~A~ 58 (88)
T d2cq1a1 9 RVLHIRKLPGEVTE-----TEVIALGL-------------------------PFGKVTNILMLKGKNQAFLELATEEAAI 58 (88)
T ss_dssp SEEEEESCCTTCCH-----HHHHHTTT-------------------------TTSCEEEEEEETTTTEEEEEESSHHHHH
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHh-------------------------cccccccccccccceEEEEEeCCHHHHH
Confidence 49999999986544 34567777 5566777778888899999999999999
Q ss_pred HHHHHhc--CCccCCcceEEEEeCC
Q psy258 119 KARINLH--QSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~--~~~f~g~~lrIyFAq~ 141 (238)
+|...++ +..+.|++++|.|++.
T Consensus 59 ~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 59 TMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp HHHHHHHHSCCEETTEECEEEECSC
T ss_pred HHHHHHccCCCccCCCEEEEEECCC
Confidence 9998765 5678999999999976
No 39
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.60 E-value=3.1e-08 Score=72.97 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=58.6
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF 111 (238)
+++|||.||+..+=+ +.|+++|++|| ++.++...+ +.+=++|.|
T Consensus 8 ~~~lfV~nL~~~~t~-----~~l~~~F~~~g-------------------------~v~~v~i~~d~~tg~~~g~afV~f 57 (99)
T d1whwa_ 8 SGRLFVRNLSYTSSE-----EDLEKLFSAYG-------------------------PLSELHYPIDSLTKKPKGFAFVTF 57 (99)
T ss_dssp CEEEEEECCCTTCCH-----HHHHHHHHTTS-------------------------CEEEEECCCCTTTCCCCSEEEEEE
T ss_pred CCEEEEECCCCcCCH-----HHHHHHHHhcC-------------------------CceeeeecccccccccCcceEEEE
Confidence 568999999976444 35667788554 454444432 223589999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
.+.++|.+|+..|++..|.|+.|+|.+++..
T Consensus 58 ~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~ 88 (99)
T d1whwa_ 58 MFPEHAVKAYAEVDGQVFQGRMLHVLPSTIK 88 (99)
T ss_dssp SSHHHHHHHHHHTTTEESSSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 9999999999999999999999999999873
No 40
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.59 E-value=6.2e-08 Score=70.09 Aligned_cols=73 Identities=18% Similarity=0.239 Sum_probs=57.5
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC------CCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS------FRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS------F~RiiVVF~ 112 (238)
.+|||+||+..+-+ +.|+.+|++||+ +.++...+. .|-++|.|.
T Consensus 8 ~~l~V~nL~~~~t~-----~~l~~~F~~~G~-------------------------i~~v~i~~d~~tg~~~g~afV~f~ 57 (88)
T d1rk8a_ 8 WILFVTSIHEEAQE-----DEIQEKFCDYGE-------------------------IKNIHLNLDRRTGFSKGYALVEYE 57 (88)
T ss_dssp EEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTSSEEEEEEEEES
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHHcCC-------------------------cccccccccccccccccceeEEEC
Confidence 58999999987544 456678885554 555544332 234899999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|+..|++..+.|+.|+|.||.+
T Consensus 58 ~~~~A~~A~~~lng~~l~g~~l~V~~a~~ 86 (88)
T d1rk8a_ 58 THKQALAAKEALNGAEIMGQTIQVDWCFV 86 (88)
T ss_dssp SHHHHHHHHHHHTTCEETTEECEEEESEE
T ss_pred CHHHHHHHHHHcCCCEECCEEEEEEEecC
Confidence 99999999999999999999999999876
No 41
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.59 E-value=1.2e-07 Score=67.04 Aligned_cols=72 Identities=24% Similarity=0.339 Sum_probs=56.7
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-----CCCeEEEEeCCH
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-----SFRRMRVNYESS 114 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-----SF~RiiVVF~~~ 114 (238)
-|||.|||..+-+ +.|+.+|++||+ +..+...+ +.|-++|.|.+.
T Consensus 2 rl~V~nLp~~~~~-----~~l~~~F~~~G~-------------------------v~~~~i~~~~~g~~~g~afV~f~~~ 51 (78)
T d1no8a_ 2 KLLVSNLDFGVSD-----ADIQELFAEFGT-------------------------LKKAAVHYDRSGRSLGTADVHFERK 51 (78)
T ss_dssp EEEEESCCTTCCH-----HHHHHHHHHHSC-------------------------EEEEEESCSSCCCSCCEEEEEESCH
T ss_pred EEEEECCCCCCCH-----HHHHHHHHHhCC-------------------------CeEEEEEEeeccccceeEEEEECCH
Confidence 3899999987555 355678886655 44444332 345799999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.+|.+.+++..++|+.|+|.+|.+
T Consensus 52 ~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 52 ADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp HHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred HHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 999999999999999999999999863
No 42
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58 E-value=6.5e-08 Score=68.66 Aligned_cols=72 Identities=22% Similarity=0.311 Sum_probs=57.5
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeCC
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYES 113 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~~ 113 (238)
+|||.||+..+=+ +.|+.+|++| |++.++...+ +.|-++|.|.+
T Consensus 2 slfV~nL~~~~te-----~~l~~~F~~~-------------------------G~i~~v~i~~d~~tg~~~g~aFV~f~~ 51 (80)
T d1cvja1 2 SLYVGDLHPDVTE-----AMLYEKFSPA-------------------------GPILSIRVCRDMITRRSLGYAYVNFQQ 51 (80)
T ss_dssp EEEEESCCTTCCH-----HHHHHHHGGG-------------------------SCEEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEEEeCCCCcCCH-----HHHHHHHHHh-------------------------CCEeEEEEEecccccCCCCceEEEECC
Confidence 7999999986644 3566788855 5555555543 23579999999
Q ss_pred HHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 114 SAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 114 ~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.++|..|+..|++..+.|+.|+|.||+.
T Consensus 52 ~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 52 PADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp HHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred HHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 9999999999999999999999999874
No 43
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58 E-value=6.1e-08 Score=70.15 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=58.3
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC----CCCeEEEEeCCH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK----SFRRMRVNYESS 114 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk----SF~RiiVVF~~~ 114 (238)
++|||.||+..+=+ +.|+.+|++||+| ..+...+ +.|-++|.|.+.
T Consensus 9 ~~l~V~nLp~~~t~-----~~l~~~F~~~G~v-------------------------~~~~i~~~~~~~kg~afV~f~~~ 58 (89)
T d1cvja2 9 GNIFIKNLDKSIDN-----KALYDTFSAFGNI-------------------------LSCKVVCDENGSKGYGFVHFETQ 58 (89)
T ss_dssp TEEEEESCCSSCCH-----HHHHHHHHTTSCE-------------------------EEEEECCBTTBCCSCEEEEESCH
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHhcCCc-------------------------eEEEEEeecCCCcceeEEEECCH
Confidence 58999999987644 3566788866554 4333332 345699999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.+|...|++..+.|+.|+|.+|++
T Consensus 59 ~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 59 EAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp HHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred HHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 999999999999999999999999987
No 44
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.58 E-value=7.4e-08 Score=69.98 Aligned_cols=75 Identities=21% Similarity=0.197 Sum_probs=56.8
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEe
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNY 111 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF 111 (238)
..||||.|||..+-+ +.|+.+|++||+ +..+...+ +.|-++|.|
T Consensus 8 ~~tlfV~nLp~~~te-----~~l~~~f~~~G~-------------------------v~~~~~~~~~~~~~~~g~afV~F 57 (98)
T d1x4ha1 8 GKTVFIRNLSFDSEE-----EALGEVLQQFGD-------------------------LKYVRVVLHPDTEHSKGCAFAQF 57 (98)
T ss_dssp CCCEEEESCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEECCBCSSSCCBCSEEEEEE
T ss_pred CCEEEEcCCCCcCCH-----HHHHHHHhcccc-------------------------ceeeeeccccccccccceEEEEE
Confidence 369999999987655 355678886655 44444433 335699999
Q ss_pred CCHHHHHHHHHHhcC------CccCCcceEEEEeCCC
Q psy258 112 ESSAAAAKARINLHQ------SVFASSKINVYFVQPM 142 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~------~~f~g~~lrIyFAq~~ 142 (238)
.+.++|.+|+..+++ ..+.|+.++|.||++.
T Consensus 58 ~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~k 94 (98)
T d1x4ha1 58 MTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTR 94 (98)
T ss_dssp SSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCCC
T ss_pred cCHHHHHHHHHHcccccccCCcEECCEEEEEEECCCC
Confidence 999999999999874 4577889999999874
No 45
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=7.4e-08 Score=68.60 Aligned_cols=68 Identities=15% Similarity=0.140 Sum_probs=52.4
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC--C----CCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK--S----FRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk--S----F~RiiVVF~ 112 (238)
+||||.||+..+=+ +.|+.+|++||+ +.++...+ . .+=++|.|.
T Consensus 10 ~~l~V~nL~~~~te-----~~l~~~F~~~G~-------------------------i~~v~i~~~~~~~~~~g~afV~f~ 59 (83)
T d2cqca1 10 CCLGVFGLSLYTTE-----RDLREVFSKYGP-------------------------IADVSIVYDQQSRRSRGFAFVYFE 59 (83)
T ss_dssp GCEEEESCCSSCCH-----HHHHHHHHTTSC-------------------------EEEEEEEECSSSSSEEEEEEEEES
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHHhCC-------------------------CccccccccccccccccceEEEEC
Confidence 49999999986554 456678886655 44443332 2 234999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEE
Q psy258 113 SSAAAAKARINLHQSVFASSKINV 136 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrI 136 (238)
+.++|..|+..|++..|.|+.|+|
T Consensus 60 ~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 60 NVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp SHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CHHHHHHHHHHcCCCEECCEEeEC
Confidence 999999999999999999988876
No 46
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.56 E-value=7.3e-08 Score=71.43 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=59.0
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHH
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSA 115 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~e 115 (238)
....+|||.||+...-. .+.|+.+|++||+ +..+.. +.+-++|.|.+.+
T Consensus 13 ~~~~~lfV~nL~~~~~~----~~~L~~~F~~~G~-------------------------i~~~~i--~rg~aFV~f~~~~ 61 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVK----KSDVEAIFSKYGK-------------------------IVGCSV--HKGFAFVQYVNER 61 (98)
T ss_dssp SCCCCEEEEEECTTTCC----HHHHHHSSTTSSC-------------------------EEEEEE--ETEEEEEEESSHH
T ss_pred CCCcEEEEeCCCcccCC----HHHHHHHHhhcCC-------------------------EEEEEE--eCCeEEEEECCHH
Confidence 44568999999864333 2357788886655 555444 3467999999999
Q ss_pred HHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 116 AAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 116 aA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+|.+|...|++..|.|+.|+|.+++.
T Consensus 62 ~A~~Ai~~lng~~~~g~~l~V~~a~~ 87 (98)
T d1wf2a_ 62 NARAAVAGEDGRMIAGQVLDINLAAE 87 (98)
T ss_dssp HHHHHHHTTTTCEETTEECEEEETTS
T ss_pred HHHHHHHHcCCCEECCEEEEEEECCC
Confidence 99999999999999999999999875
No 47
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.54 E-value=1.1e-07 Score=68.62 Aligned_cols=72 Identities=11% Similarity=0.113 Sum_probs=57.4
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAA 118 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~ 118 (238)
|.|||.|||..+-+ + .|+.+|++||+ +..+... +-|-++|.|.+.++|.
T Consensus 1 nrvfV~nlp~~~~~-~----~l~~~F~~~G~-------------------------v~~~~i~-~~g~afV~f~~~~~a~ 49 (87)
T d3begb1 1 NRVVVSGLPPSGSW-Q----DLKDHMREAGD-------------------------VCYADVY-RDGTGVVEFVRKEDMT 49 (87)
T ss_dssp CCEEEEECCSSCCT-T----HHHHHHGGGSC-------------------------EEEEEEC-TTSEEEEEESSHHHHH
T ss_pred CeEEEECCCCcCCH-H----HHHHHHhhhcc-------------------------ccccccc-ccceeeEEeCCHHHHH
Confidence 57999999988766 2 46678886654 5454433 3377999999999999
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+|...|++..|.|..+++-|++.
T Consensus 50 ~Ai~~l~g~~~~g~~i~v~~~~~ 72 (87)
T d3begb1 50 YAVRKLDNTKFRSHEGETAYIRV 72 (87)
T ss_dssp HHHHHHTTCBCCCTTSCCCBCEE
T ss_pred HHHHHhCCCEECCcEeEEeEEec
Confidence 99999999999999988877654
No 48
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.51 E-value=8.1e-08 Score=70.18 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=62.5
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
+.||||+||+..+-+ +.|+.+|++||++. .. .++.-..-++.|-++|.|.+.++|
T Consensus 13 ~~~ifV~nL~~~~te-----~~l~~~F~~~G~i~-------------------~~-~v~~~~~g~~kg~afv~F~~~e~a 67 (91)
T d1fjeb1 13 PFNLFIGNLNPNKSV-----AELKVAISELFAKN-------------------DL-AVVDVRTGTNRKFGYVDFESAEDL 67 (91)
T ss_dssp SEEEEEECCCTTSCH-----HHHHHHHHHHHHHH-------------------TC-CCCEEEEETTTTEEEEEESSHHHH
T ss_pred CcEEEEeCccCcchH-----HHHHHHHhcCCcEE-------------------Ee-eeeecCCCCccEEeEEeeCCHHHH
Confidence 459999999986655 45778899888754 22 344445567788999999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+|.. +++..++|..|+|-+|+.
T Consensus 68 ~~Al~-~~g~~~~g~~i~V~~ak~ 90 (91)
T d1fjeb1 68 EKALE-LTGLKVFGNEIKLEKPKG 90 (91)
T ss_dssp HHHHH-GGGEEETTEEEEEECCCC
T ss_pred HHHHh-cCCcEECCEEEEEEecCC
Confidence 99985 999999999999999875
No 49
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.50 E-value=7.3e-08 Score=70.04 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=56.7
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCC---------CeEE
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSF---------RRMR 108 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF---------~Rii 108 (238)
.|+|||.|||..+-+ ++|+ .++++|++||+ +..+...+.. +-++
T Consensus 8 ~n~vyV~nLp~~~t~-~~l~-~~~e~F~~~G~-------------------------I~~v~i~~~~~~~~~~~~~g~aF 60 (89)
T d2cpia1 8 KNLVFVVGLSQRLAD-PEVL-KRPEYFGKFGK-------------------------IHKVVINNSTSYAGSQGPSASAY 60 (89)
T ss_dssp SSCEEEEEECTTTCC-HHHH-HSTTTTTTTSC-------------------------EEEEEEECCSSCCSSSCCCEEEE
T ss_pred cCEEEEECCCCccCH-HHHH-HHHHHhcccCC-------------------------ceEEEEeeccCcCCCCCcceEEE
Confidence 479999999988776 5564 45677886655 5455444321 3489
Q ss_pred EEeCCHHHHHHHHHHhcCCccCCcceEEE
Q psy258 109 VNYESSAAAAKARINLHQSVFASSKINVY 137 (238)
Q Consensus 109 VVF~~~eaA~~Ar~~L~~~~f~g~~lrIy 137 (238)
|.|.+.++|.+|...|++..|.|+.||+.
T Consensus 61 V~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 61 VTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp EEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred EecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 99999999999999999999999999873
No 50
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=1.4e-07 Score=70.05 Aligned_cols=63 Identities=16% Similarity=0.206 Sum_probs=50.7
Q ss_pred HHHHHHHhhhhcCCceEEEecCC--CCeEEEEeCCHHHHHHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 81 LKEQIETLLSQFGKPKSFQYLKS--FRRMRVNYESSAAAAKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 81 ~~~~~~~~~~~~~~iv~fv~LkS--F~RiiVVF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
|++.+++.++.||.+..+...+. -|.++|.|.+.++|..|...|++..|.|+.|+|.|....+
T Consensus 32 i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 32 IREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTT 96 (99)
T ss_dssp HHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSCC
T ss_pred HHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcC
Confidence 44555556667777777665443 3689999999999999999999999999999999987644
No 51
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.49 E-value=2.1e-07 Score=66.88 Aligned_cols=74 Identities=16% Similarity=0.309 Sum_probs=56.7
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC-------CCeEEEE
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS-------FRRMRVN 110 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS-------F~RiiVV 110 (238)
..+|||.||+.++-.. +.|+.+|++||+ +..+...+. .|=++|.
T Consensus 4 ~~~l~V~nLp~~~t~e----d~l~~~F~~~G~-------------------------i~~v~i~~~~~~~~~~kg~afV~ 54 (86)
T d2ghpa3 4 GREIMIRNLSTELLDE----NLLRESFEGFGS-------------------------IEKINIPAGQKEHSFNNCCAFMV 54 (86)
T ss_dssp TTEEEEEEECTTTCCH----HHHHHHHGGGSC-------------------------EEEEECCSCCC---CCCEEEEEE
T ss_pred CCEEEEECCCCCcccH----HHHHHHHHhhhh-------------------------ccceeeecccCCccccceeeeEE
Confidence 3699999999876552 246788886655 544443332 2348999
Q ss_pred eCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 111 YESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 111 F~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
|.+.++|.+|.+ |++..|.|+.|+|.||++
T Consensus 55 f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~~ 84 (86)
T d2ghpa3 55 FENKDSAERALQ-MNRSLLGNREISVSLADK 84 (86)
T ss_dssp ESSHHHHHHHGG-GTTEEETTEEEEEEECCC
T ss_pred ECCHHHHHHHHh-cCCCEECCEEEEEEEcCC
Confidence 999999999985 999999999999999886
No 52
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49 E-value=4.5e-07 Score=65.07 Aligned_cols=73 Identities=25% Similarity=0.261 Sum_probs=59.1
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec------CCCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL------KSFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L------kSF~RiiVVF~ 112 (238)
..|||.|||..+-+ + .|+.+|++| |++..+... ++.+-++|.|.
T Consensus 2 ~rlfV~nlp~~~te-~----~l~~~F~~~-------------------------G~v~~v~i~~d~~tg~~rg~aFV~f~ 51 (85)
T d2u2fa_ 2 HKLFIGGLPNYLND-D----QVKELLTSF-------------------------GPLKAFNLVKDSATGLSKGYAFCEYV 51 (85)
T ss_dssp CCEEEETCCSSCCS-H----HHHHHHTSS-------------------------SCEEEEEEECCCSSSCCCCEEEEEES
T ss_pred CEEEEECCCCCCCH-H----HHHHHHHhc-------------------------CccceEEeeccccccccceeEEEEEC
Confidence 46999999987766 3 455678855 555555543 34567999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|..|+..|++..+.|+.|+|.||..
T Consensus 52 ~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 52 DINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp SSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 99999999999999999999999999976
No 53
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.47 E-value=4.1e-07 Score=64.99 Aligned_cols=71 Identities=20% Similarity=0.301 Sum_probs=54.5
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
++|||.|||..+-+ +.|+.+|++||+ +..+...+ +.|-++|.|.
T Consensus 7 t~lfV~nlp~~~te-----~~l~~~F~~~G~-------------------------i~~~~~~~d~~~g~~~g~afV~f~ 56 (85)
T d1b7fa2 7 TNLYVTNLPRTITD-----DQLDTIFGKYGS-------------------------IVQKNILRDKLTGRPRGVAFVRYN 56 (85)
T ss_dssp CEEEEESCCTTCCH-----HHHHHHHTSSSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHhhCC-------------------------EeeeeeecccccccCceeEEEEEC
Confidence 57999999987644 356688886655 44444332 2345899999
Q ss_pred CHHHHHHHHHHhcCCccCC--cceEEEEe
Q psy258 113 SSAAAAKARINLHQSVFAS--SKINVYFV 139 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g--~~lrIyFA 139 (238)
+.++|.+|++.|++..+.| ++|+|.||
T Consensus 57 ~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 57 KREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp SHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 9999999999999998876 67999886
No 54
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.47 E-value=1.7e-07 Score=66.77 Aligned_cols=71 Identities=28% Similarity=0.292 Sum_probs=55.3
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC---------CCCeEEEEe
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK---------SFRRMRVNY 111 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk---------SF~RiiVVF 111 (238)
|||.|||..+=+ +.|+.+|++||+ +.+....+ +.|-++|.|
T Consensus 1 LfV~nLp~~~t~-----~~l~~~F~~~G~-------------------------v~~v~i~~~~~~~~~~~~kG~afV~f 50 (85)
T d2cpfa1 1 LFIKNLNFSTTE-----ETLKGVFSKVGA-------------------------IKSCTISKKKNKAGVLLSMGFGFVEY 50 (85)
T ss_dssp EEEESCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEEEEEEECTTCCEEEEEEEEEEE
T ss_pred CEEcCCCCCCCH-----HHHHHHHHHhCC-------------------------ccccceecccccccccccceEEEEEE
Confidence 799999986544 456788886655 44333322 122389999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+.++|.+|+..+++..+.|+.|+|.||+.
T Consensus 51 ~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 51 KKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp SSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 999999999999999999999999999876
No 55
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.46 E-value=2.2e-07 Score=68.74 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=59.0
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
+.+|||.|||..+=. +.|+.+|++||+| .... +.+-+-++|.|.+.++|
T Consensus 15 ~~~i~V~Nlp~~~~~-----~~L~~~F~~~G~v-------------------------~~~~-i~~~g~afV~f~~~~~a 63 (98)
T d1wg4a_ 15 DFRVLVSGLPPSGSW-----QDLKDHMREAGDV-------------------------CYAD-VQKDGMGMVEYLRKEDM 63 (98)
T ss_dssp SCEEEEECCCSSCCH-----HHHHHHHTTSSCE-------------------------EEEE-EETTTEEEEEESSHHHH
T ss_pred CCEEEEECCCCCCCH-----HHHHHHHHhhccc-------------------------cccc-ccccceEEEEECCHHHH
Confidence 458999999987554 3466788866554 3332 34558899999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+|...|++..|.|..|++.|++.
T Consensus 64 ~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 64 EYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp HHHHHHHSSEEEECTTSCEEEEEE
T ss_pred HHHHHHhCCCEeCCeEEEEEEEec
Confidence 999999999999999999999876
No 56
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.44 E-value=2.8e-07 Score=63.77 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=53.0
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHHHH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAAKA 120 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~~A 120 (238)
|||.|||..+-+ +.|+.+|++||++. ...-+..-..=++.+-++|.|.+.++|..|
T Consensus 2 lfV~nLp~~~te-----~~l~~~F~~~G~i~-------------------~~~~~~~~~~~~~~~~afV~F~~~~~a~~a 57 (75)
T d2msta_ 2 IFVGGLSVNTTV-----EDVKHYFEQFGKVD-------------------DAMLMFDKTTNRHRGFGFVTFESEDIVEKV 57 (75)
T ss_dssp EEEECCCSSCCH-----HHHHHHHHTTSCCS-------------------EECCBCCTTCTTSCCEEEEECSCHHHHHHH
T ss_pred EEEeCCCCCCCH-----HHHHHHHHHhCCcc-------------------eeeeeeeccccccCceeEEEECCHHHHHHH
Confidence 899999986555 45778899887754 100000000112345699999999999999
Q ss_pred HHHhcCCccCCcceEEEEe
Q psy258 121 RINLHQSVFASSKINVYFV 139 (238)
Q Consensus 121 r~~L~~~~f~g~~lrIyFA 139 (238)
+. +++..|.|+.++|..|
T Consensus 58 l~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 58 CE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp HH-CSSCCBTTBCCEEEEC
T ss_pred Hh-cCCCEECCeEEEEEEC
Confidence 85 9999999999999875
No 57
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=7e-07 Score=63.93 Aligned_cols=71 Identities=21% Similarity=0.281 Sum_probs=54.4
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
++|||.|||..+=+ +.|+.+|++||+ +.++..++ +.+-++|.|.
T Consensus 7 ~~lfV~nLp~~~te-----~~L~~~F~~~G~-------------------------v~~v~i~~d~~~g~~kg~afV~f~ 56 (85)
T d1fxla2 7 ANLYVSGLPKTMTQ-----KELEQLFSQYGR-------------------------IITSRILVDQVTGVSRGVGFIRFD 56 (85)
T ss_dssp CEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred CEEEEeCCCCCCCH-----HHHHHHHHHhCC-------------------------ccccccccccccccCCCeeEEEEc
Confidence 57999999986543 456788886654 55554443 2235899999
Q ss_pred CHHHHHHHHHHhcCCccCC--cceEEEEe
Q psy258 113 SSAAAAKARINLHQSVFAS--SKINVYFV 139 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g--~~lrIyFA 139 (238)
+.++|.+|.+.|++..+.| .+++|.||
T Consensus 57 ~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 57 KRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp SHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 9999999999999999987 46888886
No 58
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.41 E-value=1.6e-07 Score=68.77 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=60.0
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAA 117 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA 117 (238)
.+||||.||+..+=+ +.|+.+|++||.+. .+ ...-++.+=++|.|.+.++|
T Consensus 16 ~~~l~V~nL~~~~te-----~~l~~~F~~~g~v~-----------------------~~-~~~~~~~~~afV~f~~~~~A 66 (96)
T d1fjca_ 16 ARTLLAKNLSFNITE-----DELKEVFEDALEIR-----------------------LV-SQDGKSKGIAYIEFKSEADA 66 (96)
T ss_dssp GGEEEEESCCSSCCH-----HHHHHHHCSEEEEC-----------------------CE-EETTEEEEEEEEEESSHHHH
T ss_pred CCEEEEeCCCCCCCH-----HHHHHHHHhcccce-----------------------ee-eecCccccEEEEEeCCHHHH
Confidence 369999999987543 45678899777643 11 12223445599999999999
Q ss_pred HHHHHHhcCCccCCcceEEEEeCCCC
Q psy258 118 AKARINLHQSVFASSKINVYFVQPMT 143 (238)
Q Consensus 118 ~~Ar~~L~~~~f~g~~lrIyFAq~~t 143 (238)
.+|+..|++..|.|+.|+|.|+++..
T Consensus 67 ~~A~~~l~~~~~~gr~i~V~~a~~k~ 92 (96)
T d1fjca_ 67 EKNLEEKQGAEIDGRSVSLYYTGEKG 92 (96)
T ss_dssp HHHHHHTTEEEETTEEEEEEECSSSC
T ss_pred HHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 99999999999999999999998743
No 59
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=2.2e-07 Score=68.74 Aligned_cols=76 Identities=21% Similarity=0.209 Sum_probs=57.1
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-----CCCeEEEE
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-----SFRRMRVN 110 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-----SF~RiiVV 110 (238)
.-|++|||.||+..+-+ +.|+.+|++||+ +......+ +.|-++|.
T Consensus 16 ~~~~~lfV~nLp~~~te-----~~L~~~F~~~G~-------------------------i~~~~~~~~~~~~~~g~afV~ 65 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDE-----QELENMLKPFGQ-------------------------VISTRILRDSSGTSRGVGFAR 65 (101)
T ss_dssp CCTTEEEEESCCTTCCH-----HHHHHTTTTTSC-------------------------EEEEEEEECSSSCEEEEEEEE
T ss_pred CCCCEEEEeCCCCCCCH-----HHHHHHHhhccc-------------------------ccceeeecccccccccceeEE
Confidence 33789999999987644 356678886655 44343333 23469999
Q ss_pred eCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 111 YESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 111 F~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
|.+.++|.+|+..|+|..+.|+++++..+++
T Consensus 66 f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 66 MESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp ESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred eCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 9999999999999999999998877655544
No 60
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.36 E-value=2.7e-07 Score=65.84 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=57.1
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec---CCCCeEEEEeCCH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL---KSFRRMRVNYESS 114 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L---kSF~RiiVVF~~~ 114 (238)
+++|+|.|||..+-+ +.|+.+|++||.+. ..+.+..- ++.|-++|.|.+.
T Consensus 9 ~~~l~v~nLp~~~~~-----~di~~~F~~~~~~~----------------------~~~~~~~~~~g~~~G~afV~f~~~ 61 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSI-----DEILDFFYGYQVIP----------------------GSVCLKYNEKGMPTGEAMVAFESR 61 (86)
T ss_dssp SEEEEEESCCTTCCH-----HHHHHHTTTSCCCT----------------------TTCEEEECSSSCEEEEEEEEESCH
T ss_pred CCEEEEECCCCCCCH-----HHHHHHHhhcccce----------------------eEEEEEeCCCCCcceEEEEEEcCc
Confidence 457999999986555 45667899887754 11222222 2234699999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEe
Q psy258 115 AAAAKARINLHQSVFASSKINVYFV 139 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFA 139 (238)
++|.+|.+.|++..++|.+++|.+|
T Consensus 62 e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 62 DEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp HHHHHHHHHTTTCEETTEECEEEES
T ss_pred HHHHHHHHHcCCCEECCEEEEEEEC
Confidence 9999999999999999999998875
No 61
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=4.2e-06 Score=62.11 Aligned_cols=61 Identities=21% Similarity=0.312 Sum_probs=50.5
Q ss_pred HHHHHHHhhhhcCCceEEEecC--------CCCeEEEEeCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 81 LKEQIETLLSQFGKPKSFQYLK--------SFRRMRVNYESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 81 ~~~~~~~~~~~~~~iv~fv~Lk--------SF~RiiVVF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+++.|++.+++||.+.++...+ +.|+++|.|.+.++|.+|...|+|..|.|+.+++.|...
T Consensus 27 i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 27 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDP 95 (104)
T ss_dssp HHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEECH
T ss_pred HHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcCH
Confidence 3445666666888888877543 337999999999999999999999999999999999764
No 62
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.29 E-value=4.6e-07 Score=63.77 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=52.5
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec----CCCCeEEEEeCCH
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL----KSFRRMRVNYESS 114 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L----kSF~RiiVVF~~~ 114 (238)
+|++|.|||..+-. +.|+.+|++||+|. .+... ...+-++|.|.+.
T Consensus 1 Ttv~V~nlp~~~t~-----~~l~~~F~~~G~I~-------------------------~v~~~~~~~~~~~~afV~F~~~ 50 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQ-----NKVYKYFKHCGPII-------------------------HVDVADSLKKNFRFARIEFARY 50 (75)
T ss_dssp CEEEEEEECTTCCH-----HHHHHHHGGGSCEE-------------------------EEEEEECTTSSSEEEEEEESSH
T ss_pred CEEEEECCCCCCCH-----HHHHHHHhcCCceE-------------------------EEEEEeeccccceEEEEEEcch
Confidence 58999999976533 46778899776653 33322 2345799999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEE
Q psy258 115 AAAAKARINLHQSVFASSKINVYF 138 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyF 138 (238)
++|.+|. .+++..|.|+.+.|..
T Consensus 51 ~~a~~Al-~~~~~~i~g~~i~V~~ 73 (75)
T d2ghpa2 51 DGALAAI-TKTHKVVGQNEIIVSH 73 (75)
T ss_dssp HHHHHHH-TTTTCEETTEECEEEE
T ss_pred HHhHHHH-HhcCcEECCEEEEEEE
Confidence 9999996 5899899998888765
No 63
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=1.3e-06 Score=64.96 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=51.9
Q ss_pred CcEEEec--CCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHH
Q psy258 39 KSLIITN--LNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAA 116 (238)
Q Consensus 39 ~TLiitn--L~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~ea 116 (238)
++|+|+| |+..+-+ +.|+.+|+ .||.+..+...+..+.++|.|.+.++
T Consensus 19 ~~l~V~ng~L~~~vte-----~~L~~~F~-------------------------~~G~i~~i~~~~~k~~aFV~f~~~e~ 68 (101)
T d2cq2a1 19 QSLVVANGGLGNGVSR-----NQLLPVLE-------------------------KCGLVDALLMPPNKPYSFARYRTTEE 68 (101)
T ss_dssp SEEEEETCTGGGTCCH-----HHHHHHHH-------------------------HHSCEEEEECCTTCSCEEEEESSHHH
T ss_pred ceEEEECCCCCCCCCH-----HHHHHHHH-------------------------hhCcccEEeeccCccEEEEEECCHHH
Confidence 5999988 8876554 45667788 55777888888999999999999999
Q ss_pred HHHHHHHhcCCccC
Q psy258 117 AAKARINLHQSVFA 130 (238)
Q Consensus 117 A~~Ar~~L~~~~f~ 130 (238)
|.+|+..|+|..+.
T Consensus 69 A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 69 SKRAYVTLNGKEVV 82 (101)
T ss_dssp HHHHHHHTTTCEEE
T ss_pred HHHHHHHhCCCCCC
Confidence 99999999998664
No 64
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22 E-value=1.5e-06 Score=63.89 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=54.6
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-------CCCeEEEE
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-------SFRRMRVN 110 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-------SF~RiiVV 110 (238)
|.||||.||+..+=+ +.|+++|++|| ++.....+ +.+-++|.
T Consensus 15 ~~~v~V~nLp~~~te-----~~l~~~f~~~g--------------------------~~~~~~~~~~~~~g~~~g~afV~ 63 (104)
T d1wi8a_ 15 PYTAFLGNLPYDVTE-----ESIKEFFRGLN--------------------------ISAVRLPREPSNPERLKGFGYAE 63 (104)
T ss_dssp CEEEEEESCCSSCCH-----HHHHHHTTTSC--------------------------EEEEECCBCSSCTTSBCSCEEEE
T ss_pred CCEEEEeCCCCcCCH-----HHHHHHHHHhc--------------------------cccceeeeeeccCCCcceeeeEE
Confidence 469999999976544 45667888554 33333332 22469999
Q ss_pred eCCHHHHHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 111 YESSAAAAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 111 F~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
|.+.++|.+|+ .+++..|.|..|+|.||.+.
T Consensus 64 f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~~ 94 (104)
T d1wi8a_ 64 FEDLDSLLSAL-SLNEESLGNKRIRVDVADQA 94 (104)
T ss_dssp ESSHHHHHHHH-GGGTCEETTEECEEEECCCC
T ss_pred ECCHHHHHHHH-HcCCCEECCEEEEEEECCCC
Confidence 99999997665 69999999999999998763
No 65
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=1.9e-06 Score=64.28 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=56.3
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec------CCCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL------KSFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L------kSF~RiiVVF~ 112 (238)
.+|||.||+..+-+ +.|+.+|++||+|. .+... ++.|-++|.|.
T Consensus 21 ~~lfVgnLp~~~te-----~~L~~~F~~~G~i~-------------------------~~~i~~d~~~~~~kg~aFV~f~ 70 (103)
T d1x4ba1 21 RKLFIGGLSFETTE-----ESLRNYYEQWGKLT-------------------------DCVVMRDPASKRSRGFGFVTFS 70 (103)
T ss_dssp TEEEEECCTTCCCH-----HHHHHHHTSSCCCS-------------------------EEEEECCTTTSSCCSEEEEECS
T ss_pred CEEEEeCCCCcCCH-----HHHHHHHHhhCccc-------------------------ceeecccccCCCccCeEEEEEC
Confidence 58999999987644 35678899776654 33332 45577999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|.. +++..|.|+.++|-+|++
T Consensus 71 ~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 71 SMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp SHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 9999999975 677789999999999876
No 66
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20 E-value=9.5e-07 Score=63.59 Aligned_cols=74 Identities=9% Similarity=0.124 Sum_probs=55.8
Q ss_pred CCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec-CCCCeEEEEeCCHH
Q psy258 37 LPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL-KSFRRMRVNYESSA 115 (238)
Q Consensus 37 ~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L-kSF~RiiVVF~~~e 115 (238)
-.++|||.||+..+=+ +.|+.+|++||++ ..+... ++.+-++|.|.+.+
T Consensus 4 ~s~~lfV~nLp~~~te-----~~L~~~F~~~G~v-------------------------~~v~~~~~~~gfafV~f~~~~ 53 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTE-----DELREFFSQYGDV-------------------------MDVFIPKPFRAFAFVTFADDQ 53 (88)
T ss_dssp CCCEEEEESCCSSSCH-----HHHHHHSTTTSCC-------------------------CEEECCSSCCSCCEEECSCHH
T ss_pred CCCEEEEeCCCCCCCH-----HHHHHHHHHcCCc-------------------------eEEEEeeccCceEEEEECCHH
Confidence 4679999999987544 4567888866654 444333 34455999999999
Q ss_pred HHHHHHHHhcCCccCCcceEEEEeCCC
Q psy258 116 AAAKARINLHQSVFASSKINVYFVQPM 142 (238)
Q Consensus 116 aA~~Ar~~L~~~~f~g~~lrIyFAq~~ 142 (238)
+|.+|.. ++..+.|+.|+|.+|++.
T Consensus 54 ~a~~a~~--~~~~i~g~~l~v~~a~~k 78 (88)
T d1wf0a_ 54 IAQSLCG--EDLIIKGISVHISNAEPK 78 (88)
T ss_dssp HHHHTTT--CEEEETTEEEEEECCCCC
T ss_pred HHHHHHh--CCCEECCEEeEEEeCCCC
Confidence 9999864 666789999999999763
No 67
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=6.6e-06 Score=59.69 Aligned_cols=75 Identities=23% Similarity=0.167 Sum_probs=55.0
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-------CCCeEEEEeC
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-------SFRRMRVNYE 112 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-------SF~RiiVVF~ 112 (238)
.|||.|||..+-+ +.|+.+|++||. .+..+...+ +.|=++|.|.
T Consensus 3 rLyV~nLp~~~te-----~~l~~~f~~~g~------------------------~i~~v~~~~~~~~~~~~rg~aFV~F~ 53 (96)
T d2disa1 3 RLFIGGIPKMKKR-----EEILEEIAKVTE------------------------GVLDVIVYASAADKMKNRGFAFVEYE 53 (96)
T ss_dssp EEEEECCCTTSCH-----HHHHHHHHHHST------------------------TEEEEECCSSSCTTTTTCCEEEEEES
T ss_pred EEEEcCCCCcCCH-----HHHHHHHHHhCC------------------------cceEEEEeeeccccccCCCeEEEEEc
Confidence 4999999986555 356677885543 133444433 3345999999
Q ss_pred CHHHHHHHHHHhcC--CccCCcceEEEEeCCCC
Q psy258 113 SSAAAAKARINLHQ--SVFASSKINVYFVQPMT 143 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~--~~f~g~~lrIyFAq~~t 143 (238)
+.++|..|+..|++ +.+.|+.++|.||++..
T Consensus 54 ~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~~ 86 (96)
T d2disa1 54 SHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEI 86 (96)
T ss_dssp SHHHHHHHHTTTTTCCSCBTTBCCEEEESCSSC
T ss_pred CHHHHHHHHHHHcCCCeEECCEEEEEEEcCCCC
Confidence 99999999999975 45678899999998744
No 68
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.16 E-value=3e-06 Score=62.21 Aligned_cols=76 Identities=16% Similarity=0.135 Sum_probs=58.1
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec---CCCCeEEEEeCCH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL---KSFRRMRVNYESS 114 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L---kSF~RiiVVF~~~ 114 (238)
.+||||+|||..+-+ +.|+.+|++||.+. ..+.+..- ++.|-++|.|.+.
T Consensus 8 ~~~v~v~nLp~~~t~-----~~l~~~F~~~g~i~----------------------~~~~~~~~~~g~~~G~afV~F~s~ 60 (103)
T d2cpya1 8 KVCAHITNIPFSITK-----MDVLQFLEGIPVDE----------------------NAVHVLVDNNGQGLGQALVQFKNE 60 (103)
T ss_dssp CCEEEEESCCTTSCH-----HHHHHHTTTSCCCS----------------------TTEEECCCTTSSCSSCEEEECSSH
T ss_pred ceEEEEeCCCCCCCH-----HHHhhhhcccceEE----------------------EEEEEEeCCCCCcCccEEEEECCH
Confidence 469999999986554 46678899887654 22223222 3467899999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.+|.. +++..|+|+.++|..+..
T Consensus 61 ~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 61 DDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp HHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred HHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 99999985 899999999999988643
No 69
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.15 E-value=2e-06 Score=60.75 Aligned_cols=69 Identities=17% Similarity=0.159 Sum_probs=52.8
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEe------cCCCCeEEEEeCC
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQY------LKSFRRMRVNYES 113 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~------LkSF~RiiVVF~~ 113 (238)
.|||.|||..+-+ + .|+.+|++||+|. .+.. -++.|=++|.|.+
T Consensus 2 klfV~nLp~~~te-~----~l~~~F~~~G~i~-------------------------~v~i~~d~~tg~~kG~aFV~f~~ 51 (77)
T d1uawa_ 2 KMFIGGLSWQTTQ-E----GLREYFGQFGEVK-------------------------ECLVMRDPLTKRSRGFGFVTFMD 51 (77)
T ss_dssp CEEEESCCSSCCS-H----HHHHHHTTTSCCC-------------------------CEEEECCCCSSSCSSEEEECCCC
T ss_pred EEEEeCCCCcCCH-H----HHHHHHHHhCCcc-------------------------eeeeecccCCCCccceEEEEECC
Confidence 4899999987666 3 4567888776653 3322 2355679999999
Q ss_pred HHHHHHHHHHhcCCccCCcceEEEEe
Q psy258 114 SAAAAKARINLHQSVFASSKINVYFV 139 (238)
Q Consensus 114 ~eaA~~Ar~~L~~~~f~g~~lrIyFA 139 (238)
.++|.+|.. +++..++|+.++|..|
T Consensus 52 ~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 52 QAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp TTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred HHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 999999996 6888899999988765
No 70
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13 E-value=1.1e-06 Score=60.57 Aligned_cols=65 Identities=25% Similarity=0.250 Sum_probs=49.9
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeCCH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYESS 114 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~~~ 114 (238)
|||.|||..+=+ +.|+.+|++| |++..+...+ +.+-++|.|.+.
T Consensus 1 lyV~nLp~~~te-----~~l~~~F~~~-------------------------G~v~~~~~~~~~~~~~~~g~afV~f~~~ 50 (72)
T d1x4ea1 1 LYIRGLQPGTTD-----QDLVKLCQPY-------------------------GKIVSTKAILDKTTNKCKGYGFVDFDSP 50 (72)
T ss_dssp EEEESCCTTCCH-----HHHHTTSTTT-------------------------SCEEEEEEECCSSSCSCCSEEEEEESCH
T ss_pred CEEeCCCCcCCH-----HHHHHHHhhh-------------------------ccccccccccccccccccceeEEEECCH
Confidence 799999986655 3566788855 4555544433 446799999999
Q ss_pred HHHHHHHHHhcCCccCCcceE
Q psy258 115 AAAAKARINLHQSVFASSKIN 135 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lr 135 (238)
++|.+|...|++..|.|+.+|
T Consensus 51 ~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 51 SAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp HHHHHHHHHHHHHTCCEESCC
T ss_pred HHHHHHHHHhCCCEECCEECc
Confidence 999999999999999987654
No 71
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10 E-value=2.9e-06 Score=62.87 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=56.6
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
.||||.||+..+-+ +.|+.+|++| |.+.++..++ +-|=++|.|.
T Consensus 19 ~tifV~nL~~~~te-----~~l~~~F~~~-------------------------G~V~~v~i~~d~~tg~~kG~afV~F~ 68 (101)
T d2cq4a1 19 RTVFCMQLAARIRP-----RDLEDFFSAV-------------------------GKVRDVRIISDRNSRRSKGIAYVEFC 68 (101)
T ss_dssp TEEEEESCCTTCCH-----HHHHHHHTTT-------------------------SCEEEEEECCSCCSSSCCCCEEEEES
T ss_pred CEEEEECCCCCCCH-----HHHHHHHcCC-------------------------CeEEEEEeeecCCCccccceEEEEEC
Confidence 59999999986555 3556788855 5555565554 2345999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|. .|++..|.|..|+|.++++
T Consensus 69 ~~e~a~~A~-~l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 69 EIQSVPLAI-GLTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp CGGGHHHHH-HHTTEEETTEEEEEEEHHH
T ss_pred CHHHHHHHH-HHCCCEECCEEEEEEECCC
Confidence 999999998 5999999999999999864
No 72
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09 E-value=6.3e-06 Score=59.81 Aligned_cols=73 Identities=16% Similarity=0.126 Sum_probs=54.1
Q ss_pred CCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEE
Q psy258 37 LPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVN 110 (238)
Q Consensus 37 ~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVV 110 (238)
-.++|||.|||..+=+ +.|+.+|++||+| ..+...+ +.|=++|.
T Consensus 7 ~~~~lfV~nLp~~~te-----~~l~~~F~~~G~i-------------------------~~v~i~~d~~tg~srG~aFV~ 56 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTE-----QDLKEYFSTFGEV-------------------------LMVQVKKDLKTGHSKGFGFVR 56 (90)
T ss_dssp CCCCEEEESCCSSCCH-----HHHHHHHGGGSCE-------------------------EEEEEEECSSSCSEEEEEEEE
T ss_pred CCCeEEEECCCCCCCH-----HHHHHHHHhhccc-------------------------ceeeeccCCCCcccCCEEEEE
Confidence 3579999999976544 4677888866554 4433322 23458999
Q ss_pred eCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 111 YESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 111 F~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
|.+.++|.+|....+ .+.|+.++|.+|.+
T Consensus 57 f~~~~~a~~al~~~~--~l~Gr~i~v~~a~~ 85 (90)
T d2cqga1 57 FTEYETQVKVMSQRH--MIDGRWCDCKLPNS 85 (90)
T ss_dssp ESSHHHHHHHHHSCE--EETTEEEEEECCCT
T ss_pred ECCHHHHHHHHhcCC--ccCCEEeEEEeCCC
Confidence 999999999988554 57889999999876
No 73
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05 E-value=1e-05 Score=59.67 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=56.0
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
++|||.||+..+-+ +.|+.+|++| |++.++..++ +.|=++|.|.
T Consensus 11 ~~lfV~nLp~~~te-----~~l~~~F~~~-------------------------G~i~~v~i~~d~~tg~~kg~afV~f~ 60 (103)
T d2cqda1 11 TKIFVGGLPYHTTD-----ASLRKYFEGF-------------------------GDIEEAVVITDRQTGKSRGYGFVTMA 60 (103)
T ss_dssp SEEEEECCCSSCCH-----HHHHHHHHTT-------------------------SCEEEEEESCCSSSCCCCSEEEEEES
T ss_pred cEEEEeCCCCcCcH-----HHHHHHHhhc-------------------------ccccceeccccccccccCCeEEEEEC
Confidence 47999999986544 3456778855 5566666554 3345999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
+.++|.+|...+++ .+.|+.++|.+|..
T Consensus 61 ~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~ 88 (103)
T d2cqda1 61 DRAAAERACKDPNP-IIDGRKANVNLAYL 88 (103)
T ss_dssp SHHHHHHHHTCSSC-EETTEECEEEESTT
T ss_pred CHHHHHHHHHHCCC-cCCCEEEEEEEcCC
Confidence 99999999999887 58999999999875
No 74
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.96 E-value=1.5e-05 Score=55.49 Aligned_cols=70 Identities=11% Similarity=0.171 Sum_probs=52.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
.+|||.|||..+=+ +.|+.+|++||. +..+.... +.|-++|.|.
T Consensus 3 r~lfV~nLp~~~te-----~~l~~~F~~~G~-------------------------i~~~~~~~~~~~~~~~g~afV~f~ 52 (79)
T d1l3ka2 3 KKIFVGGIKEDTEE-----HHLRDYFEQYGK-------------------------IEVIEIMTDRGSGKKRGFAFVTFD 52 (79)
T ss_dssp SEEEEECCTTTCCH-----HHHHHHHTTTSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred CEEEECCCCCcCCH-----HHHHHHHHHhcc-------------------------ccccccccCCCCcccccEEEEEEc
Confidence 58999999986555 456678886655 44444332 2345999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEe
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFV 139 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFA 139 (238)
+.++|.+|. .+++..|.|+.++|..|
T Consensus 53 ~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 53 DHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 999888887 57999999999998765
No 75
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=1.7e-05 Score=56.60 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=53.6
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC-----CCCeEEEEeCC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK-----SFRRMRVNYES 113 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk-----SF~RiiVVF~~ 113 (238)
.||||.|||..+=+ +.|+.+|++||+ +.++...+ +.|=++|.|.+
T Consensus 7 rtvfV~nlp~~~te-----~~l~~~F~~~G~-------------------------v~~v~l~~~~~~~~kG~afV~f~~ 56 (85)
T d1zh5a2 7 RSVYIKGFPTDATL-----DDIKEWLEDKGQ-------------------------VLNIQMRRTLHKAFKGSIFVVFDS 56 (85)
T ss_dssp TEEEEECCCTTCCH-----HHHHHHHTTSCC-------------------------EEEEEEEECTTCCEEEEEEEEESC
T ss_pred CEEEEECCCCCCCH-----HHHHHHHHHhcc-------------------------cccceeeeeccCCcceEEEEEEcC
Confidence 59999999986543 456788886655 44443332 22469999999
Q ss_pred HHHHHHHHHHhcCCccCCcceEEEEeC
Q psy258 114 SAAAAKARINLHQSVFASSKINVYFVQ 140 (238)
Q Consensus 114 ~eaA~~Ar~~L~~~~f~g~~lrIyFAq 140 (238)
.++|.+|.. +++..|.|+.|+|.+..
T Consensus 57 ~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 57 IESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred HHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 999999974 68899999999998853
No 76
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=1.2e-06 Score=63.03 Aligned_cols=78 Identities=8% Similarity=0.094 Sum_probs=56.1
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCHHHHHH
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESSAAAAK 119 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~eaA~~ 119 (238)
.|||.||+..+-+ + .|+++|++||++.... +.....+.....-++.|=++|.|.+.++|..
T Consensus 3 rlyVgNLp~~~te-~----~l~~~F~~~g~~~~~~--------------~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~ 63 (90)
T d1u2fa_ 3 RLYVGNIPFGITE-E----AMMDFFNAQMRLGGLT--------------QAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 63 (90)
T ss_dssp EEEECSCCTTCCT-T----HHHHHHHHHHTTTTSC--------------CSSSCSEEECCEETTTTEEEEEESSCTTTTT
T ss_pred EEEEcCCCCccch-H----HHHHHHHhhCcEEEEE--------------EeccceeeecccCCCceEEEEEeCCHHHHHH
Confidence 6999999987777 3 4567888888764110 0011223333444566779999999999999
Q ss_pred HHHHhcCCccCCcceEEE
Q psy258 120 ARINLHQSVFASSKINVY 137 (238)
Q Consensus 120 Ar~~L~~~~f~g~~lrIy 137 (238)
|. .|++..|.|+.|+|.
T Consensus 64 a~-~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 64 AM-AFDGIIFQGQSLKIR 80 (90)
T ss_dssp GG-GGSSCCSSSSCCCCB
T ss_pred HH-hhCCcEECCEEEEEC
Confidence 97 599999999999875
No 77
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.85 E-value=1.7e-05 Score=59.12 Aligned_cols=58 Identities=17% Similarity=0.292 Sum_probs=50.0
Q ss_pred HHHHHHhhhhcCCceEEEecC-----CCCeEEEEeCCHHHHHHHHHHhcCCccCCcceEEEEe
Q psy258 82 KEQIETLLSQFGKPKSFQYLK-----SFRRMRVNYESSAAAAKARINLHQSVFASSKINVYFV 139 (238)
Q Consensus 82 ~~~~~~~~~~~~~iv~fv~Lk-----SF~RiiVVF~~~eaA~~Ar~~L~~~~f~g~~lrIyFA 139 (238)
.+.+++++++||.+.++...+ +.|.++|.|.+.++|.+|...|+|..|.|+.|+|.|+
T Consensus 41 ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 41 EEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred HHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 345677778999999988764 3477999999999999999999999999999999885
No 78
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.82 E-value=3.6e-05 Score=54.67 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=53.6
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~ 112 (238)
.+|||+|||..+=+ +.|+.+|++||+ +..+..++ +.|=++|.|.
T Consensus 7 ~~lfV~nlp~~~te-----~~l~~~F~~~G~-------------------------i~~v~i~~d~~tg~~kG~afV~f~ 56 (84)
T d1l3ka1 7 RKLFIGGLSFETTD-----ESLRSHFEQWGT-------------------------LTDCVVMRDPNTKRSRGFGFVTYA 56 (84)
T ss_dssp GEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred cEEEEECCCCCCCH-----HHHHHHHHhhcc-------------------------ccceeecccccCCCcccEEEEEEc
Confidence 68999999987644 456788886655 54444332 2346999999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEEeC
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYFVQ 140 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyFAq 140 (238)
+.++|.+|.. +++..++|+.++|--|.
T Consensus 57 ~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 57 TVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp SHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 9999999986 57788999999987664
No 79
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=5.2e-05 Score=52.62 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=50.1
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEEeCCH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVNYESS 114 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVVF~~~ 114 (238)
|||.|||..+-+ +.|+++|++||+ +.++...+ +-|=++|.|.+.
T Consensus 2 lfV~nl~~~~te-----~~l~~~F~~~G~-------------------------i~~~~i~~d~~t~~~kg~afV~f~~~ 51 (75)
T d1hd0a_ 2 MFIGGLSWDTTK-----KDLKDYFSKFGE-------------------------VVDCTLKLDPITGRSRGFGFVLFKES 51 (75)
T ss_dssp EEEECCCTTCCH-----HHHHHHHHTTSC-------------------------EEEEECCCBTTTTBCCSEEEEEESSH
T ss_pred EEEeCCCCcCCH-----HHHHHHHHhhcc-------------------------ccccccccCCCCCCcCceEEEEECCH
Confidence 799999986555 456688886655 44444332 345699999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEE
Q psy258 115 AAAAKARINLHQSVFASSKINVYF 138 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyF 138 (238)
++|.+|.. +++..+.|+.++|..
T Consensus 52 ~~a~~Al~-~~~~~l~Gr~i~V~r 74 (75)
T d1hd0a_ 52 ESVDKVMD-QKEHKLNGKVIDPKR 74 (75)
T ss_dssp HHHHHHHH-TCCCCBTTBCCEECC
T ss_pred HHHHHHHh-cCCCEECCCEEEeeE
Confidence 99999987 677789998888743
No 80
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=1.9e-05 Score=55.34 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=48.0
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC------CCeEEEEeCCH
Q psy258 41 LIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS------FRRMRVNYESS 114 (238)
Q Consensus 41 LiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS------F~RiiVVF~~~ 114 (238)
|||.|||.++=+ +.|+.+|++| |++..+...+. .|=++|.|.+.
T Consensus 2 lfVgnLp~~~te-----~~l~~~F~~~-------------------------G~I~~v~i~~d~~t~~~rG~~FV~f~~~ 51 (75)
T d1x0fa1 2 IFVGGLSPDTPE-----EKIREYFGGF-------------------------GEVESIELPMDNKTNKRRGFCFITFKEE 51 (75)
T ss_dssp EEEESCCSSCCH-----HHHHHHHHHH-------------------------SCEEEEECCCCTTTCCTTCCEEEEESSS
T ss_pred EEEcCCCCCCCH-----HHHHHHHHHh-------------------------CCcccccccccccccccccEEEEEECCH
Confidence 799999986543 4566778855 44555544432 23499999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEe
Q psy258 115 AAAAKARINLHQSVFASSKINVYFV 139 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFA 139 (238)
++|.+|... ++..++|+.++|-.|
T Consensus 52 ~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 52 EPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp HHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred HHHHHHHhh-CCCEECCEEeEEEEC
Confidence 999999864 445588888887654
No 81
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.73 E-value=7.8e-05 Score=54.64 Aligned_cols=74 Identities=19% Similarity=0.089 Sum_probs=56.0
Q ss_pred CCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEEE
Q psy258 37 LPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRVN 110 (238)
Q Consensus 37 ~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiVV 110 (238)
-..+|+|.|||-.+-+ +.|+.+|++| +.+...+.+. +.|-++|-
T Consensus 14 ~~~~v~v~nLP~~~te-----~dI~~~F~~~-------------------------g~v~~~v~~~~~~~~~~kG~afV~ 63 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSK-----EEIVQFFSGL-------------------------EIVPNGMTLPVDFQGRSTGEAFVQ 63 (104)
T ss_dssp CCCEEEEESCCTTCCH-----HHHHHHTTTC-------------------------CEEEEEEECCBCSSSCBCSEEEEE
T ss_pred CCcEEEEeCCCCCCCH-----HHHHHHHHhc-------------------------CCceEEEEEEeCCCCCcceEEEEE
Confidence 3468999999976554 4566788855 4444433332 22569999
Q ss_pred eCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 111 YESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 111 F~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
|.+.++|.+|+. +++..|.++.++|..+..
T Consensus 64 F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~ 93 (104)
T d1wg5a_ 64 FASQEIAEKALK-KHKERIGHRYIEIFKSSR 93 (104)
T ss_dssp ESSHHHHHHHHT-TTTCCSSSSCCEEEEECT
T ss_pred eCCHHHHHHHHh-hCCCEEcceEEEEEECCH
Confidence 999999998885 899999999999999876
No 82
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71 E-value=5.4e-05 Score=55.42 Aligned_cols=75 Identities=8% Similarity=0.104 Sum_probs=54.8
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCC----CCeEEEEe
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKS----FRRMRVNY 111 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkS----F~RiiVVF 111 (238)
.-+.||||.|||-.+=+ +.|+.+|++|| .+.-...... .+-++|.|
T Consensus 13 ~~~~~v~v~nLp~~~te-----~dl~~~F~~~~-------------------------~~~v~~~~~~~g~~~G~afVeF 62 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATE-----NDIYNFFSPLN-------------------------PMRVHIEIGPDGRVTGEADVEF 62 (102)
T ss_dssp SSSCEEEEESCCTTCCH-----HHHHHSSCSCC-------------------------CSEEEEEESSSSCEEEEEEEEC
T ss_pred CCCCEEEEeCCCCcCCH-----HHHHHHHhccC-------------------------cceeeeEEecCCcceEEEEEEE
Confidence 44569999999976554 45567777553 2211222222 24599999
Q ss_pred CCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 112 ESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 112 ~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.+.++|.+|+. +++..|.|+.++|+++..
T Consensus 63 ~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~ 91 (102)
T d1weza_ 63 ATHEDAVAAMA-KDKANMQHRYVELFLNST 91 (102)
T ss_dssp SSSHHHHHHHT-TSSCCSSSSCCEEEEECC
T ss_pred CCHHHHHHHHH-cCCCEECCEEEEEEEcCC
Confidence 99999999975 899999999999999876
No 83
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.55 E-value=3.4e-05 Score=57.54 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=55.3
Q ss_pred CCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEE---EecCCCCeEEEEeCCH
Q psy258 38 PKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSF---QYLKSFRRMRVNYESS 114 (238)
Q Consensus 38 p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~f---v~LkSF~RiiVVF~~~ 114 (238)
..||||+|||-.+=+ +.|+.+|++||.+. ..+-. ..-++.|-++|.|.+.
T Consensus 18 ~~~i~v~nLp~~~t~-----~di~~~F~~~g~~~----------------------~~~~~~~~~~g~~~G~afVeF~~~ 70 (112)
T d1wela1 18 GFCVYLKGLPFEAEN-----KHVIDFFKKLDIVE----------------------DSIYIAYGPNGKATGEGFVEFRNE 70 (112)
T ss_dssp CCEEEEECCCTTCCH-----HHHHHHSCSSCBCT----------------------TTCEEEECTTSSEEEEEEEEBSSS
T ss_pred CeEEEEecCCCcCcH-----HHHhhHHhhccccc----------------------cceeeecCcccceeeEEEEEECCH
Confidence 459999999975533 45678888777653 11111 1122335699999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 115 AAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
++|.+|+. +++..|+|..++|..+..
T Consensus 71 e~a~~al~-~~~~~i~gR~i~V~~~~~ 96 (112)
T d1wela1 71 ADYKAALC-RHKQYMGNRFIQVHPITK 96 (112)
T ss_dssp HHHHHHHT-SCSBCSTTSCBEEEEECH
T ss_pred HHHHHHHH-cCCCcCCCEEEEEEEcCh
Confidence 99999885 899999999999987643
No 84
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.54 E-value=0.00011 Score=57.41 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=55.7
Q ss_pred CCCCcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecC------CCCeEEE
Q psy258 36 QLPKSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLK------SFRRMRV 109 (238)
Q Consensus 36 ~~p~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~Lk------SF~RiiV 109 (238)
+-.++|+|+||+..+-+ +.|+.+|++||+ +..+...+ +.|-++|
T Consensus 95 ~~~~~i~V~~lp~~~te-----~~L~~~f~~~G~-------------------------v~~~~i~~~~~~~~~~g~~fV 144 (183)
T d1u1qa_ 95 LTVKKIFVGGIKEDTEE-----HHLRDYFEQYGK-------------------------IEVIEIMTDRGSGKKRGFAFV 144 (183)
T ss_dssp CCCSEEEEECCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTCCEEEEEEE
T ss_pred cccceeEEccCCCcCCH-----HHHhhhhccCCc-------------------------eeeeeeecccccCccceeEEE
Confidence 33469999999876543 467788886655 44443332 2346999
Q ss_pred EeCCHHHHHHHHHHhcCCccCCcceEEEEeCC
Q psy258 110 NYESSAAAAKARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 110 VF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.|.+.++|.+|.. +++..++|..++|.+|.+
T Consensus 145 ~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~ 175 (183)
T d1u1qa_ 145 TFDDHDSVDKIVI-QKYHTVNGHNCEVRKALS 175 (183)
T ss_dssp EESCHHHHHHHHT-SSCEEETTEEEEEEECCC
T ss_pred EECCHHHHHHHHH-hCCCeECCEEEEEEecCC
Confidence 9999999999986 677778999999999865
No 85
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.42 E-value=0.00024 Score=52.99 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=57.0
Q ss_pred cEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCH-HHHH
Q psy258 40 SLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESS-AAAA 118 (238)
Q Consensus 40 TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~-eaA~ 118 (238)
+.||.||+..+=+ +.|+++|+ .||++..+..++.-+=++|.|.+. ++|.
T Consensus 13 ~~fvgnL~~~~te-----e~Lk~~F~-------------------------~fG~V~~v~i~~~kg~gfV~F~~~~~~A~ 62 (113)
T d1owxa_ 13 LKFSGDLDDQTCR-----EDLHILFS-------------------------NHGEIKWIDFVRGAKEGIILFKEKAKEAL 62 (113)
T ss_dssp EEEEESCCSSCCH-----HHHHHHTC-------------------------SSCCEEEEECCTTCSEEEEEESSCHHHHH
T ss_pred EEEECCCCCCCCH-----HHHHHHHH-------------------------hcCChheEEEecCCceEEEEecCcHHHHH
Confidence 5678999986554 45567777 667788888899988899999986 7899
Q ss_pred HHHHHhcCCccCCcceEEEEeCC
Q psy258 119 KARINLHQSVFASSKINVYFVQP 141 (238)
Q Consensus 119 ~Ar~~L~~~~f~g~~lrIyFAq~ 141 (238)
.|...+++..+.+..++|.++..
T Consensus 63 ~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 63 GKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp HHHHHTTTSCBCTTSSSEEEEEC
T ss_pred HHHHHhcCCceecCceEEEEeec
Confidence 99999999888777777766543
No 86
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.80 E-value=0.0017 Score=45.99 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=36.1
Q ss_pred hcCCceEEEecCCCCeEEEEeCCHHHHHHHHHHhcCCccCCcc
Q psy258 91 QFGKPKSFQYLKSFRRMRVNYESSAAAAKARINLHQSVFASSK 133 (238)
Q Consensus 91 ~~~~iv~fv~LkSF~RiiVVF~~~eaA~~Ar~~L~~~~f~g~~ 133 (238)
.||+++++...++-+-++|-|.+.++|.+|.+ +++..|+|..
T Consensus 26 ~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~ 67 (81)
T d1wwha1 26 QYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESI 67 (81)
T ss_dssp TTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTE
T ss_pred hhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcE
Confidence 55677888888888889999999999999985 8999998853
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60 E-value=0.0059 Score=47.11 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=46.7
Q ss_pred CcEEEecCCCCCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEec------CCCCeEEEEeC
Q psy258 39 KSLIITNLNPDLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYL------KSFRRMRVNYE 112 (238)
Q Consensus 39 ~TLiitnL~~~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~L------kSF~RiiVVF~ 112 (238)
.||||.|||..+-+ +.|+++|++||. +..+... ++-|.++|.|.
T Consensus 7 r~lfV~nLp~~~te-----~~L~~~F~~~G~-------------------------v~~~~~~~~~~~~~~~g~afv~f~ 56 (183)
T d1u1qa_ 7 RKLFIGGLSFETTD-----ESLRSHFEQWGT-------------------------LTDCVVMRDPNTKRSRGFGFVTYA 56 (183)
T ss_dssp HEEEEESCCTTCCH-----HHHHHHHGGGSC-------------------------EEEEEEEECTTTCCEEEEEEEEES
T ss_pred CEEEEECCCCCCCH-----HHHHHHHHHcCC-------------------------EEEEEeeecccCCCccCceecccC
Confidence 49999999986544 356688886655 4444433 33357899999
Q ss_pred CHHHHHHHHHHhcCCccCCcceEEEE
Q psy258 113 SSAAAAKARINLHQSVFASSKINVYF 138 (238)
Q Consensus 113 ~~eaA~~Ar~~L~~~~f~g~~lrIyF 138 (238)
+.++|.+|+...++. +++..+.+..
T Consensus 57 ~~~~a~~a~~~~~~~-~~~~~~~~~~ 81 (183)
T d1u1qa_ 57 TVEEVDAAMNARPHK-VDGRVVEPKR 81 (183)
T ss_dssp SHHHHHHHHHTCSCE-ETTEECEEEE
T ss_pred CHHHHHHHHHhcCCc-ccccchhhhh
Confidence 999999998876554 4443444433
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.38 E-value=0.023 Score=41.85 Aligned_cols=70 Identities=11% Similarity=0.179 Sum_probs=52.1
Q ss_pred cEEEecCC----C-CCCCChHHHHHHHHHHhhcCCCcchhhhhhhHHHHHHHHhhhhcCCceEEEecCCCCeEEEEeCCH
Q psy258 40 SLIITNLN----P-DLFKDDALKEQIETLLSQFGKPKSFQYLKNDALKEQIETLLSQFGKPKSFQYLKSFRRMRVNYESS 114 (238)
Q Consensus 40 TLiitnL~----~-~vf~~~~l~~~l~~lF~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF~~~ 114 (238)
|+.|+=.+ + ..|. +++..+|-.-|++||++. ++.|+- ..+||+|.+-
T Consensus 17 TIvV~i~~~s~e~~~~FD-e~l~~~Llq~l~~~GeVi-----------------------LvRFv~----d~mwVTF~dG 68 (95)
T d1ufwa_ 17 TVVVNLQSPTLEEKNEFP-EDLRTELMQTLGSYGTIV-----------------------LVRINQ----GQMLVTFADS 68 (95)
T ss_dssp EEEEEESSCCHHHHHSCC-HHHHHHHHHHHHHHSCCS-----------------------EEEEET----TEEEEECSCS
T ss_pred EEEEEeccCCccccccCC-HHHHHHHHHHHhhCCeEE-----------------------EEEEeC----CeEEEEECCc
Confidence 77776554 1 3666 899999999999887765 334332 6899999999
Q ss_pred HHHHHHHHHhcCCccCCcceEEEE
Q psy258 115 AAAAKARINLHQSVFASSKINVYF 138 (238)
Q Consensus 115 eaA~~Ar~~L~~~~f~g~~lrIyF 138 (238)
++|.+|.. +++..+.|+.++|.-
T Consensus 69 ~SAL~al~-l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 69 HSALSVLD-VDGMKVKGRAVKISG 91 (95)
T ss_dssp HHHHHHHH-GGGSEETTEEEEEEC
T ss_pred HHHHHHhc-cCCeEEcceEEEEec
Confidence 99998874 677778887777653
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.33 E-value=0.02 Score=40.25 Aligned_cols=50 Identities=28% Similarity=0.303 Sum_probs=39.0
Q ss_pred hcCCceEEEecC--CCC-eEEEEeCCHHHHHHHHHHhcCCccCCcceEEEEeC
Q psy258 91 QFGKPKSFQYLK--SFR-RMRVNYESSAAAAKARINLHQSVFASSKINVYFVQ 140 (238)
Q Consensus 91 ~~~~iv~fv~Lk--SF~-RiiVVF~~~eaA~~Ar~~L~~~~f~g~~lrIyFAq 140 (238)
.++.+.++...+ -+. -+.|..++.++|+.|...||+..+++++|.|.|+.
T Consensus 19 ~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 19 RHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred hheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 444555444433 332 58899999999999999999999999999999863
No 90
>d2ob5a1 c.133.1.1 (A:1-147) Hypothetical protein Atu2016 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=30.30 E-value=19 Score=26.83 Aligned_cols=20 Identities=30% Similarity=0.544 Sum_probs=17.4
Q ss_pred CCCCcHHHHHHHHhcCCCCc
Q psy258 180 EPLVNYDLLAAIASLTPGLS 199 (238)
Q Consensus 180 ~P~~~~DL~~ala~L~~ge~ 199 (238)
.|.+|.||+.+||++++|..
T Consensus 6 ~~iLnp~Ll~~La~mGHgD~ 25 (147)
T d2ob5a1 6 DPALNADVLHALRAMGHGDT 25 (147)
T ss_dssp CTTSCHHHHHHHHHCCTTCE
T ss_pred CCCcCHHHHHHHHhcCCCCe
Confidence 36789999999999999873
No 91
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.90 E-value=69 Score=21.96 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=26.5
Q ss_pred CCCeEEEEeCCHHHHHHHHHHhcCCccCCc
Q psy258 103 SFRRMRVNYESSAAAAKARINLHQSVFASS 132 (238)
Q Consensus 103 SF~RiiVVF~~~eaA~~Ar~~L~~~~f~g~ 132 (238)
.+.|+-|.|.+.+....-++..+|..|.+.
T Consensus 44 ~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~ 73 (91)
T d1uw4a_ 44 MYARAYINFKNQEDIILFRDRFDGYVFLDN 73 (91)
T ss_dssp CCEEEEEEESSSHHHHHHHHHHTTCEEECT
T ss_pred cceEEEEEeCCHHHHHHHHHHcCCcEEEcC
Confidence 557999999999999999999999887663
No 92
>d1ogda_ c.133.1.1 (A:) Ribose transport protein RbsD {Bacillus subtilis [TaxId: 1423]}
Probab=25.19 E-value=17 Score=26.77 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=17.4
Q ss_pred CCCCcHHHHHHHHhcCCCCc
Q psy258 180 EPLVNYDLLAAIASLTPGLS 199 (238)
Q Consensus 180 ~P~~~~DL~~ala~L~~ge~ 199 (238)
.+.+|.||+.+|+++++|..
T Consensus 4 ~~iL~peLl~~La~mGHgD~ 23 (131)
T d1ogda_ 4 HGILNSHLAKILADLGHTDK 23 (131)
T ss_dssp SSCSCHHHHHHHHHCCTTCE
T ss_pred ccccCHHHHHHHHHcCCCCE
Confidence 36789999999999999884
No 93
>d1of8a_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]}
Probab=21.62 E-value=51 Score=28.20 Aligned_cols=66 Identities=14% Similarity=0.188 Sum_probs=38.5
Q ss_pred hHHHHHHHHhhhhcCCceEEEecCCCCeEEEEe-----CCHHHHHHHHHHhcC--CccCC---cceEEEEeCCCCCCCCC
Q psy258 79 DALKEQIETLLSQFGKPKSFQYLKSFRRMRVNY-----ESSAAAAKARINLHQ--SVFAS---SKINVYFVQPMTPFDSA 148 (238)
Q Consensus 79 ~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF-----~~~eaA~~Ar~~L~~--~~f~g---~~lrIyFAq~~t~~~~~ 148 (238)
..-|++|+.+|..-++ |++||. .|.++|..=-+.|.. ..+.+ -.||+||-|+.|.+ .-
T Consensus 30 ~~~R~~I~~Il~g~D~-----------RlLVIvGPCSIHD~~aa~eYA~rL~~l~~~~~d~l~iVMRvYfEKPRTtv-GW 97 (346)
T d1of8a_ 30 KRGRREAIDIITGKDD-----------RVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTV-GW 97 (346)
T ss_dssp HHHHHHHHHHHTTSCC-----------SEEEEEECSCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSS-SC
T ss_pred HHHHHHHHHHhcCCCC-----------CeEEEEcCCcCCCHHHHHHHHHHHHHHHHhhcCceEEEEeecccCccccc-Cc
Confidence 4457889988876554 766665 577777542222222 11222 26999999997763 23
Q ss_pred CCccCCCC
Q psy258 149 DQHLQPPA 156 (238)
Q Consensus 149 ~~~L~~P~ 156 (238)
++.+-=|.
T Consensus 98 KGlinDP~ 105 (346)
T d1of8a_ 98 KGLINDPD 105 (346)
T ss_dssp CCTTTCTT
T ss_pred cccccccc
Confidence 34444344
No 94
>d1n8fa_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Escherichia coli, phenylalanine-regulated isozyme [TaxId: 562]}
Probab=20.01 E-value=69 Score=27.30 Aligned_cols=56 Identities=21% Similarity=0.293 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhhhcCCceEEEecCCCCeEEEEe-----CCHHHHHHHHHHhcC--CccCCc---ceEEEEeCCCCCC
Q psy258 79 DALKEQIETLLSQFGKPKSFQYLKSFRRMRVNY-----ESSAAAAKARINLHQ--SVFASS---KINVYFVQPMTPF 145 (238)
Q Consensus 79 ~~~~~~~~~~~~~~~~iv~fv~LkSF~RiiVVF-----~~~eaA~~Ar~~L~~--~~f~g~---~lrIyFAq~~t~~ 145 (238)
..-|++|+.+|..-++ |++||. .|.++|..--+.|.. ..+.++ .||+||-|+.|.+
T Consensus 30 ~~~R~~I~~Il~g~D~-----------RlLVVvGPCSIHD~~aa~eYA~rL~~l~~~~~d~l~iVMRvYfEKPRTtv 95 (343)
T d1n8fa_ 30 AHARKAIHKILKGNDD-----------RLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV 95 (343)
T ss_dssp HHHHHHHHHHHTTSCC-----------CEEEEEECSSCCCHHHHHHHHHHHHHHHHHTTTTEEEEEECCCCCCCSSS
T ss_pred HHHHHHHHHHhcCCCC-----------CeEEEEcCCcCCCHHHHHHHHHHHHHHHHhhccceEEeeeecccCCCccC
Confidence 4467889999875544 666665 566676442222222 123332 6999999997764
Done!