BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2580
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P3P4|KCD15_XENTR BTB/POZ domain-containing protein kctd15 OS=Xenopus tropicalis
GN=kctd15 PE=2 SV=1
Length = 255
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 5 SLTRSPVSPLA----AQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q6DC02|KCD15_DANRE BTB/POZ domain-containing protein kctd15 OS=Danio rerio GN=kctd15
PE=2 SV=1
Length = 257
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 5 SLTRSPVSPLA----AQGIPLPAQLTKANAPVHIDVGGHMYTSSLATLTK 50
>sp|Q8K0E1|KCD15_MOUSE BTB/POZ domain-containing protein KCTD15 OS=Mus musculus
GN=Kctd15 PE=1 SV=1
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 31 SLTRSPVSPLA----AQGIPLPAQLTKANAPVHIDVGGHMYTSSLATLTK 76
>sp|Q5XJ34|KC15L_DANRE BTB/POZ domain-containing protein kctd15-like OS=Danio rerio
GN=kctd15l PE=1 SV=1
Length = 257
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 5 SLTRSPVSPLA----AQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q96SI1|KCD15_HUMAN BTB/POZ domain-containing protein KCTD15 OS=Homo sapiens
GN=KCTD15 PE=1 SV=1
Length = 283
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 31 SLTRSPVSPLA----AQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTK 76
>sp|Q0VD00|KCD15_BOVIN BTB/POZ domain-containing protein KCTD15 OS=Bos taurus GN=KCTD15
PE=2 SV=1
Length = 283
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 31 SLTRSPVSPLA----AQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTK 76
>sp|Q6DCX3|KCD15_XENLA BTB/POZ domain-containing protein kctd15 OS=Xenopus laevis
GN=kctd15 PE=2 SV=1
Length = 255
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 6 SPTPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
S T +P +PLA GIP A ++ APVH+DVGG +YTSSL TLTK
Sbjct: 5 SLTRSPVSPLA----AQGIPLPAQLTKSNAPVHLDVGGHMYTSSLATLTK 50
>sp|Q2HJ48|KCTD1_BOVIN BTB/POZ domain-containing protein KCTD1 OS=Bos taurus GN=KCTD1
PE=2 SV=1
Length = 257
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 8 TPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
T +P +PL N++ GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 7 TRSPASPL--NNQ--GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q5M956|KCTD1_MOUSE BTB/POZ domain-containing protein KCTD1 OS=Mus musculus GN=Kctd1
PE=2 SV=1
Length = 257
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 8 TPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
T +P +PL N++ GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 7 TRSPASPL--NNQ--GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q719H9|KCTD1_HUMAN BTB/POZ domain-containing protein KCTD1 OS=Homo sapiens GN=KCTD1
PE=1 SV=1
Length = 257
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 8 TPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
T +P +PL N++ GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 7 TRSPASPL--NNQ--GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q8R4G8|KCTD1_RAT BTB/POZ domain-containing protein KCTD1 OS=Rattus norvegicus
GN=Kctd1 PE=2 SV=2
Length = 257
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 8 TPTPPAPLAFNHKITGIPCVAAASRYTAPVHIDVGGTIYTSSLETLTK 55
T +P +PL N++ GIP A ++ APVHIDVGG +YTSSL TLTK
Sbjct: 7 TRSPASPL--NNQ--GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTK 50
>sp|Q6DG99|KCTD6_DANRE BTB/POZ domain-containing protein KCTD6 OS=Danio rerio GN=kctd6
PE=2 SV=1
Length = 237
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 32 RYTAPVHIDVGGTIYTSSLETLTK 55
R T PV ++VGG +YT+S+ TL +
Sbjct: 9 RLTHPVTLNVGGHLYTTSISTLQR 32
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,934,060
Number of Sequences: 539616
Number of extensions: 802979
Number of successful extensions: 2605
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2591
Number of HSP's gapped (non-prelim): 14
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)