BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2587
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63090|PTN_RAT Pleiotrophin OS=Rattus norvegicus GN=Ptn PE=1 SV=1
Length = 168
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKGSPTT-CEATKSISRKCKK 103
GAE CKY +W ECD NT +K RT +LK+ C+ T +IS+ C K
Sbjct: 96 GAE---CKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGK 143
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 67 WSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQC 115
WS C P + + L ++G+ T E +++ +++CK C+Y+ +W +C
Sbjct: 52 WSVCVPTSG--DCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGEC 109
Query: 116 SVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
+ + TRT LK A +A+C+K+ T++K C
Sbjct: 110 DLNTALKTRTGSLKRALHNADCQKTVTISKPC 141
>sp|P63089|PTN_MOUSE Pleiotrophin OS=Mus musculus GN=Ptn PE=2 SV=1
Length = 168
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKGSPTT-CEATKSISRKCKK 103
GAE CKY +W ECD NT +K RT +LK+ C+ T +IS+ C K
Sbjct: 96 GAE---CKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGK 143
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 67 WSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQC 115
WS C P + + L ++G+ T E +++ +++CK C+Y+ +W +C
Sbjct: 52 WSVCVPTSG--DCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGEC 109
Query: 116 SVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
+ + TRT LK A +A+C+K+ T++K C
Sbjct: 110 DLNTALKTRTGSLKRALHNADCQKTVTISKPC 141
>sp|P79281|PTN_PIG Pleiotrophin OS=Sus scrofa GN=PTN PE=2 SV=1
Length = 168
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKKA 104
GAE CKY +W ECD NT +K RT +LK+ C+ T +IS+ C K
Sbjct: 96 GAE---CKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGKV 144
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 66 SWSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQ 114
WS C P + + L ++G+ T E +++ +++CK C+Y+ +W +
Sbjct: 51 QWSVCVPTSG--DCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGE 108
Query: 115 CSVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
C + + TRT LK A +A+C+K+ T++K C
Sbjct: 109 CDLNTALKTRTGSLKRALHNADCQKTVTISKPC 141
>sp|P21782|PTN_BOVIN Pleiotrophin OS=Bos taurus GN=PTN PE=1 SV=2
Length = 168
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKK 103
GAE CKY +W ECD NT +K RT +LK+ C+ T +IS+ C K
Sbjct: 96 GAE---CKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGK 143
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 67 WSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQC 115
WS C P + + L ++G+ T E +++ +++CK C+Y+ +W +C
Sbjct: 52 WSVCVPTSG--DCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGEC 109
Query: 116 SVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
+ + TRT LK A +A+C+K+ T++K C
Sbjct: 110 DLNTALKTRTGSLKRALHNADCQKTVTISKPC 141
>sp|P21246|PTN_HUMAN Pleiotrophin OS=Homo sapiens GN=PTN PE=1 SV=1
Length = 168
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKK 103
GAE CKY +W ECD NT +K RT +LK+ C+ T +IS+ C K
Sbjct: 96 GAE---CKYQFQAWGECDLNTALKTRTGSLKRALHNAECQKTVTISKPCGK 143
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 67 WSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQC 115
WS C P + + L ++G+ T E +++ +++CK C+Y+ +W +C
Sbjct: 52 WSVCVPTSG--DCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGEC 109
Query: 116 SVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
+ + TRT LK A +A C+K+ T++K C
Sbjct: 110 DLNTALKTRTGSLKRALHNAECQKTVTISKPC 141
>sp|P32760|PTN_CHICK Pleiotrophin OS=Gallus gallus GN=PTN PE=1 SV=1
Length = 136
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKK 103
GAE CKY +W ECD NT +K RT LK+ C+ T +IS+ C K
Sbjct: 64 GAE---CKYQFQAWGECDLNTALKTRTGNLKRALHNADCQKTVTISKPCGK 111
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 105 CRYEKGSWSQCSVAGDM-TRTDMLKEANSDANCEKSRTLTKKC 146
C+Y+ +W +C + + TRT LK A +A+C+K+ T++K C
Sbjct: 67 CKYQFQAWGECDLNTALKTRTGNLKRALHNADCQKTVTISKPC 109
>sp|P48532|PTNA_XENLA Pleiotrophin-A OS=Xenopus laevis GN=ptn-a PE=2 SV=1
Length = 161
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKKA 104
GAE CKY W +CDP+T +K R+ +LK+ C+ T ++S+ C K
Sbjct: 90 GAE---CKYQFQEWGDCDPDTGLKTRSGSLKRALHNAECQKTVTLSKPCGKV 138
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 67 WSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQC 115
WS C P + + L ++G+ + E ++I ++KCK C+Y+ W C
Sbjct: 46 WSVCVPTSG--DCGLGTREGTRSGKECKQTIKTQKCKIPCNWKKQFGAECKYQFQEWGDC 103
Query: 116 SV-AGDMTRTDMLKEANSDANCEKSRTLTKKC 146
G TR+ LK A +A C+K+ TL+K C
Sbjct: 104 DPDTGLKTRSGSLKRALHNAECQKTVTLSKPC 135
>sp|Q8W0H5|PHT43_ORYSJ Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp.
japonica GN=PHT4;3 PE=2 SV=1
Length = 519
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 1 MNSSGGYFGPYQDIRMWGVFGTVLVLCLVSIINANHAENWEENAHEV--------LIRNT 52
+ S G FGP+ ++G+FG + VL +S I+ EN + +AHE+ L++
Sbjct: 248 IMSRAGIFGPFV---IFGLFGFLWVLVWISAISGTPGENAQISAHELDYITRGQKLVKTQ 304
Query: 53 RGAE---KQPCKYDK-----SSWSECDPNTHMKNRTLTLKKGSPTTCEATKSISRKCKKA 104
G E K P + K +W+ N + P + + ++A
Sbjct: 305 SGGERLRKVP-PFSKLLSKWPTWALISANAMHSWGYFVILSWMPVYFKTIYHV--NLREA 361
Query: 105 CRYEKGSWSQCSVAG 119
+ W +V G
Sbjct: 362 AWFSALPWVMMAVLG 376
>sp|P48533|PTNB_XENLA Pleiotrophin-B OS=Xenopus laevis GN=ptn-b PE=2 SV=1
Length = 161
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 54 GAEKQPCKYDKSSWSECDPNTHMKNRTLTLKKG-SPTTCEATKSISRKCKKA 104
GAE CKY W +CDP T +K R LK+ C+ T ++S+ C K
Sbjct: 90 GAE---CKYQFQEWGDCDPETGLKTRNGNLKRALHNAECQKTVTLSKPCGKV 138
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 66 SWSECDPNTHMKNRTLTLKKGSPTTCEATKSI-SRKCK----------KACRYEKGSWSQ 114
WS C P + + L ++G+ + E ++I ++KCK C+Y+ W
Sbjct: 45 QWSVCVPTS--GDCGLGTREGTRSGKECKQTIKTQKCKIPCNWKKQFGAECKYQFQEWGD 102
Query: 115 CSV-AGDMTRTDMLKEANSDANCEKSRTLTKKC 146
C G TR LK A +A C+K+ TL+K C
Sbjct: 103 CDPETGLKTRNGNLKRALHNAECQKTVTLSKPC 135
>sp|P24052|MK_CHICK Midkine OS=Gallus gallus GN=RIHB PE=1 SV=1
Length = 142
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 67 WSECDPNTHMKNRTLTLKKGS------PTTCEATKSISRKCKKACRYEKGSWSQCSV-AG 119
W C PN+ K+ L ++GS C+ + +K C+Y+ SW CS G
Sbjct: 41 WGPCIPNS--KDCGLGYREGSCGDESRKLKCKIPCNWKKKFGADCKYKFESWGGCSAKTG 98
Query: 120 DMTRTDMLKEANSDANCEKSRTLTKKC 146
TR+ +LK+A +A CE+ ++K C
Sbjct: 99 VKTRSGILKKALYNAECEEVVYVSKPC 125
>sp|Q91ZV8|GP124_MOUSE G-protein coupled receptor 124 OS=Mus musculus GN=Gpr124 PE=2 SV=2
Length = 1336
Score = 33.1 bits (74), Expect = 1.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 80 TLTLKKGSPTTCEATKSISRKCKKACRYEKGSWSQCSVAGDMTR 123
++ L G+P T SR+C +A R+E G +S C D+TR
Sbjct: 387 SVPLSGGAPGT-----RASRRCDRAGRWEPGDYSHCLYTNDITR 425
>sp|Q96PE1|GP124_HUMAN G-protein coupled receptor 124 OS=Homo sapiens GN=GPR124 PE=1 SV=2
Length = 1338
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 80 TLTLKKGSPTTCEATKSISRKCKKACRYEKGSWSQCSVAGDMTR 123
++ L G+P T SR+C +A R+E G +S C D+TR
Sbjct: 387 SVPLGGGAPGT-----RASRRCDRAGRWEPGDYSHCLYTNDITR 425
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,353,304
Number of Sequences: 539616
Number of extensions: 3125397
Number of successful extensions: 7653
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7602
Number of HSP's gapped (non-prelim): 76
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)