Query psy259
Match_columns 398
No_of_seqs 318 out of 1547
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 20:03:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 1E-110 4E-115 874.3 35.1 371 17-389 29-550 (550)
2 3hqn_D Pyruvate kinase, PK; TI 100.0 5E-103 2E-107 811.0 31.7 354 32-389 2-499 (499)
3 4drs_A Pyruvate kinase; glycol 100.0 3E-102 9E-107 810.3 33.8 276 106-389 243-526 (526)
4 3khd_A Pyruvate kinase; malari 100.0 2E-101 8E-106 800.0 33.5 275 106-388 244-519 (520)
5 3gg8_A Pyruvate kinase; malari 100.0 3E-99 1E-103 783.7 33.3 276 106-389 235-511 (511)
6 3t05_A Pyruvate kinase, PK; te 100.0 9.3E-98 3E-102 786.7 31.8 276 106-391 220-496 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 2.7E-96 9E-101 757.5 28.7 271 106-388 199-470 (470)
8 1a3w_A Pyruvate kinase; allost 100.0 5.7E-95 2E-99 752.9 34.0 354 32-388 2-500 (500)
9 2e28_A Pyruvate kinase, PK; al 100.0 7.5E-94 2.6E-98 757.4 34.1 274 106-389 200-475 (587)
10 3qtg_A Pyruvate kinase, PK; TI 100.0 1.1E-92 3.8E-97 726.4 21.8 251 106-386 210-460 (461)
11 1izc_A Macrophomate synthase i 99.4 4.9E-14 1.7E-18 140.4 3.6 110 122-246 177-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.2 2.1E-13 7.1E-18 131.3 -6.4 87 122-222 145-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.1 1.6E-11 5.4E-16 119.6 2.7 87 122-222 166-260 (287)
14 1dxe_A 2-dehydro-3-deoxy-galac 99.1 1E-10 3.5E-15 111.7 6.6 90 120-223 143-240 (256)
15 3qz6_A HPCH/HPAI aldolase; str 99.0 4.7E-10 1.6E-14 107.7 5.8 92 119-223 140-239 (261)
16 1sgj_A Citrate lyase, beta sub 98.9 1.2E-09 4.2E-14 105.5 5.9 108 104-219 105-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 98.5 2.8E-07 9.6E-12 91.2 8.1 103 106-221 149-278 (324)
18 2ols_A Phosphoenolpyruvate syn 98.1 4.9E-06 1.7E-10 91.1 7.9 106 104-221 652-778 (794)
19 3qll_A Citrate lyase; beta bar 98.0 6E-06 2E-10 81.3 6.8 103 105-219 142-255 (316)
20 2wqd_A Phosphoenolpyruvate-pro 97.9 2.9E-05 9.9E-10 82.2 10.4 89 121-220 424-528 (572)
21 2hwg_A Phosphoenolpyruvate-pro 97.8 3.3E-05 1.1E-09 81.8 8.5 90 121-221 422-527 (575)
22 1u5h_A CITE; TIM barrel, struc 97.8 2.4E-05 8.2E-10 75.3 6.1 88 122-219 104-208 (273)
23 3qqw_A Putative citrate lyase; 97.8 3.3E-05 1.1E-09 76.4 7.2 102 106-219 125-254 (332)
24 3r4i_A Citrate lyase; TIM beta 97.7 4.4E-05 1.5E-09 75.8 7.3 103 105-219 123-253 (339)
25 3oyz_A Malate synthase; TIM ba 97.0 0.00072 2.5E-08 69.1 5.9 88 122-219 150-258 (433)
26 1vbg_A Pyruvate,orthophosphate 96.7 0.0011 3.7E-08 73.3 4.6 89 122-221 742-861 (876)
27 1kbl_A PPDK, pyruvate phosphat 96.2 0.0031 1.1E-07 69.7 4.4 105 104-221 710-855 (873)
28 1t57_A Conserved protein MTH16 95.4 0.11 3.7E-06 47.9 10.8 48 265-313 34-81 (206)
29 1vp8_A Hypothetical protein AF 95.3 0.1 3.5E-06 48.0 10.1 49 265-313 26-74 (201)
30 4af0_A Inosine-5'-monophosphat 95.2 0.14 4.8E-06 53.7 12.2 131 54-221 272-414 (556)
31 4fxs_A Inosine-5'-monophosphat 92.5 2.7 9.1E-05 43.4 15.6 131 54-220 222-363 (496)
32 3cux_A Malate synthase; TIM ba 92.3 0.21 7.2E-06 52.3 6.9 93 121-220 237-364 (528)
33 3cuz_A MSA, malate synthase A; 91.9 0.12 4.3E-06 54.0 4.7 95 121-220 240-366 (532)
34 3usb_A Inosine-5'-monophosphat 88.8 3.3 0.00011 42.8 12.2 133 53-221 246-389 (511)
35 1p7t_A MSG, malate synthase G; 88.3 0.43 1.5E-05 51.4 5.1 93 121-220 418-536 (731)
36 4avf_A Inosine-5'-monophosphat 87.7 5.9 0.0002 40.6 13.2 132 54-221 220-362 (490)
37 1h6z_A Pyruvate phosphate diki 85.9 1.4 4.9E-05 48.9 7.7 89 122-221 762-881 (913)
38 3ffs_A Inosine-5-monophosphate 85.8 5.3 0.00018 40.2 11.4 125 57-220 140-275 (400)
39 1jcn_A Inosine monophosphate d 84.9 12 0.00042 38.2 13.9 128 56-221 248-388 (514)
40 3khj_A Inosine-5-monophosphate 83.4 24 0.00081 34.8 14.7 119 65-220 107-236 (361)
41 4fo4_A Inosine 5'-monophosphat 82.6 37 0.0013 33.6 15.7 97 103-221 136-241 (366)
42 1f76_A Dihydroorotate dehydrog 81.5 7 0.00024 37.6 9.9 101 105-220 192-318 (336)
43 2c6q_A GMP reductase 2; TIM ba 80.5 8.9 0.00031 37.6 10.4 96 103-222 148-254 (351)
44 1p0k_A Isopentenyl-diphosphate 79.7 8.6 0.00029 37.3 9.8 96 103-221 166-281 (349)
45 1vs1_A 3-deoxy-7-phosphoheptul 79.1 14 0.00047 35.3 10.8 148 52-234 39-195 (276)
46 1vrd_A Inosine-5'-monophosphat 78.9 23 0.00077 35.9 13.1 126 57-220 231-369 (494)
47 3glc_A Aldolase LSRF; TIM barr 78.1 6.5 0.00022 37.9 8.3 194 93-312 28-230 (295)
48 3sr7_A Isopentenyl-diphosphate 74.6 14 0.00047 36.7 9.8 98 97-221 187-308 (365)
49 2qr6_A IMP dehydrogenase/GMP r 74.6 18 0.00061 35.6 10.6 136 53-221 157-307 (393)
50 3r2g_A Inosine 5'-monophosphat 73.1 21 0.00072 35.3 10.7 94 104-220 129-228 (361)
51 2cu0_A Inosine-5'-monophosphat 72.8 19 0.00064 36.6 10.5 64 144-222 287-359 (486)
52 1kbi_A Cytochrome B2, L-LCR; f 72.8 14 0.00049 38.1 9.7 95 104-221 332-433 (511)
53 1vli_A Spore coat polysacchari 72.8 17 0.00057 36.5 9.9 165 35-230 11-199 (385)
54 4e38_A Keto-hydroxyglutarate-a 71.2 7.3 0.00025 36.3 6.5 81 103-219 72-153 (232)
55 3vnd_A TSA, tryptophan synthas 70.1 3 0.0001 39.7 3.6 130 62-219 32-177 (267)
56 4g9p_A 4-hydroxy-3-methylbut-2 69.8 11 0.00036 38.2 7.6 153 65-241 41-220 (406)
57 1eep_A Inosine 5'-monophosphat 67.9 57 0.002 32.1 12.6 132 52-220 142-285 (404)
58 1w8s_A FBP aldolase, fructose- 66.6 41 0.0014 31.4 10.7 157 134-312 39-203 (263)
59 1jqo_A Phosphoenolpyruvate car 66.6 12 0.0004 41.9 7.8 94 104-199 540-652 (970)
60 1zco_A 2-dehydro-3-deoxyphosph 65.5 39 0.0013 31.7 10.4 135 65-233 40-179 (262)
61 1xm3_A Thiazole biosynthesis p 65.5 56 0.0019 30.4 11.4 93 137-245 139-232 (264)
62 2nli_A Lactate oxidase; flavoe 64.9 26 0.00088 34.5 9.3 93 105-221 219-314 (368)
63 1wv2_A Thiazole moeity, thiazo 63.7 28 0.00094 33.3 8.8 101 122-240 135-236 (265)
64 3nav_A Tryptophan synthase alp 63.6 7.9 0.00027 36.8 5.1 129 63-219 35-179 (271)
65 3f4w_A Putative hexulose 6 pho 62.5 17 0.00057 32.1 6.8 114 106-241 91-208 (211)
66 1gte_A Dihydropyrimidine dehyd 62.4 24 0.00081 39.3 9.4 95 106-221 694-817 (1025)
67 2zbt_A Pyridoxal biosynthesis 62.2 49 0.0017 30.9 10.5 149 51-241 21-172 (297)
68 1j0a_A 1-aminocyclopropane-1-c 61.5 66 0.0023 30.4 11.4 124 170-315 86-218 (325)
69 1me8_A Inosine-5'-monophosphat 60.5 50 0.0017 33.7 10.9 97 104-220 271-381 (503)
70 1w8s_A FBP aldolase, fructose- 60.4 36 0.0012 31.8 9.1 87 122-220 72-179 (263)
71 1ydn_A Hydroxymethylglutaryl-C 60.1 61 0.0021 30.3 10.7 120 107-242 61-196 (295)
72 2htm_A Thiazole biosynthesis p 59.6 97 0.0033 29.5 11.8 122 99-239 103-226 (268)
73 1mxs_A KDPG aldolase; 2-keto-3 59.1 28 0.00097 31.9 7.9 119 50-219 24-145 (225)
74 2yw3_A 4-hydroxy-2-oxoglutarat 58.5 17 0.00057 32.8 6.1 118 49-219 10-130 (207)
75 1ko7_A HPR kinase/phosphatase; 58.3 7.9 0.00027 37.7 4.2 85 122-227 49-157 (314)
76 1ub3_A Aldolase protein; schif 58.3 35 0.0012 31.3 8.4 146 134-310 17-181 (220)
77 3inp_A D-ribulose-phosphate 3- 58.0 32 0.0011 32.2 8.1 109 116-240 130-243 (246)
78 1ypf_A GMP reductase; GUAC, pu 57.7 27 0.00093 33.7 7.9 95 102-221 135-240 (336)
79 3hgm_A Universal stress protei 57.2 17 0.00057 29.2 5.5 40 271-311 99-147 (147)
80 3pc3_A CG1753, isoform A; CBS, 57.0 26 0.00088 35.9 8.0 127 170-316 127-259 (527)
81 3dwg_A Cysteine synthase B; su 56.8 59 0.002 31.0 10.1 122 168-315 85-214 (325)
82 3nvt_A 3-deoxy-D-arabino-heptu 56.6 20 0.00067 35.9 6.8 90 105-220 193-283 (385)
83 3vkj_A Isopentenyl-diphosphate 56.5 49 0.0017 32.7 9.6 92 103-221 175-297 (368)
84 4gud_A Imidazole glycerol phos 56.5 8.8 0.0003 34.0 3.9 70 100-185 4-78 (211)
85 3g8r_A Probable spore coat pol 56.1 53 0.0018 32.5 9.7 148 51-229 5-174 (350)
86 2z08_A Universal stress protei 55.2 28 0.00095 27.8 6.5 40 271-311 88-136 (137)
87 3tnj_A Universal stress protei 54.8 21 0.00072 28.9 5.7 44 271-315 98-149 (150)
88 1ve1_A O-acetylserine sulfhydr 54.8 86 0.0029 29.3 10.8 120 170-316 76-204 (304)
89 1wbh_A KHG/KDPG aldolase; lyas 54.6 15 0.00051 33.4 5.2 120 49-219 13-135 (214)
90 1vhc_A Putative KHG/KDPG aldol 54.2 26 0.00087 32.2 6.7 119 50-219 15-136 (224)
91 3ctl_A D-allulose-6-phosphate 54.2 70 0.0024 29.3 9.7 110 116-241 102-218 (231)
92 3w01_A Heptaprenylglyceryl pho 54.1 11 0.00037 35.4 4.1 60 135-219 26-86 (235)
93 1vr6_A Phospho-2-dehydro-3-deo 53.5 64 0.0022 31.8 9.8 132 52-219 107-246 (350)
94 2nzl_A Hydroxyacid oxidase 1; 53.3 36 0.0012 33.9 8.1 93 105-221 242-337 (392)
95 2x0s_A Pyruvate phosphate diki 52.7 27 0.00092 38.8 7.7 89 122-221 762-881 (913)
96 3ovp_A Ribulose-phosphate 3-ep 52.6 89 0.0031 28.4 10.2 107 117-243 109-220 (228)
97 2v5j_A 2,4-dihydroxyhept-2-ENE 52.3 66 0.0022 30.5 9.5 87 109-220 29-118 (287)
98 3nbm_A PTS system, lactose-spe 51.8 5 0.00017 33.0 1.3 61 107-184 23-83 (108)
99 1vcf_A Isopentenyl-diphosphate 51.6 33 0.0011 32.9 7.3 32 179-222 256-287 (332)
100 3odm_A Pepcase, PEPC, phosphoe 51.2 13 0.00044 39.0 4.5 79 104-184 151-259 (560)
101 1mjh_A Protein (ATP-binding do 50.7 39 0.0013 27.7 6.8 44 270-314 108-160 (162)
102 2y5s_A DHPS, dihydropteroate s 50.6 47 0.0016 31.9 8.2 111 179-313 21-148 (294)
103 2z6i_A Trans-2-enoyl-ACP reduc 50.5 65 0.0022 30.8 9.3 79 122-220 110-191 (332)
104 3tr9_A Dihydropteroate synthas 50.0 89 0.0031 30.3 10.1 90 208-313 57-156 (314)
105 3tbh_A O-acetyl serine sulfhyd 49.7 70 0.0024 30.6 9.4 121 169-315 85-214 (334)
106 3sgz_A Hydroxyacid oxidase 2; 49.5 47 0.0016 32.7 8.1 93 105-221 207-302 (352)
107 1jqn_A Pepcase, PEPC, phosphoe 49.4 14 0.00049 40.8 4.8 80 104-185 480-578 (883)
108 2o55_A Putative glycerophospho 49.1 25 0.00087 32.2 5.9 57 169-241 202-258 (258)
109 3l6b_A Serine racemase; pyrido 48.8 1.7E+02 0.0058 28.0 12.0 117 170-315 90-213 (346)
110 2gn0_A Threonine dehydratase c 48.6 1.3E+02 0.0043 28.8 11.0 119 170-315 102-225 (342)
111 2ftp_A Hydroxymethylglutaryl-C 48.5 1.2E+02 0.0042 28.5 10.8 99 203-306 86-201 (302)
112 1p5j_A L-serine dehydratase; l 48.4 89 0.0031 30.4 10.0 117 171-315 108-233 (372)
113 1tdj_A Biosynthetic threonine 48.1 2.5E+02 0.0085 28.9 14.1 116 171-315 94-216 (514)
114 3h5i_A Response regulator/sens 48.0 94 0.0032 24.3 8.6 72 281-357 49-127 (140)
115 1aj0_A DHPS, dihydropteroate s 47.8 73 0.0025 30.3 9.0 92 206-313 44-141 (282)
116 2dum_A Hypothetical protein PH 47.5 42 0.0014 27.8 6.6 45 270-315 105-158 (170)
117 1p4c_A L(+)-mandelate dehydrog 47.3 76 0.0026 31.2 9.4 92 105-221 215-308 (380)
118 1ivn_A Thioesterase I; hydrola 47.3 53 0.0018 27.6 7.3 54 133-186 49-106 (190)
119 3lab_A Putative KDPG (2-keto-3 46.9 26 0.0009 32.3 5.5 38 169-220 96-139 (217)
120 1h1y_A D-ribulose-5-phosphate 45.9 88 0.003 28.0 8.9 102 123-241 114-222 (228)
121 2fli_A Ribulose-phosphate 3-ep 45.7 1.3E+02 0.0043 26.3 9.8 101 125-239 112-217 (220)
122 1tq8_A Hypothetical protein RV 45.5 42 0.0014 28.1 6.3 44 271-315 108-160 (163)
123 1p1x_A Deoxyribose-phosphate a 45.5 68 0.0023 30.2 8.3 125 107-243 54-193 (260)
124 3pfn_A NAD kinase; structural 45.0 9.2 0.00031 38.1 2.2 34 280-313 244-281 (365)
125 1z7w_A Cysteine synthase; tran 44.8 70 0.0024 30.2 8.4 123 170-315 81-209 (322)
126 3s3t_A Nucleotide-binding prot 44.8 42 0.0014 26.8 6.0 41 270-311 95-145 (146)
127 3fdx_A Putative filament prote 44.6 45 0.0015 26.5 6.1 41 270-311 94-142 (143)
128 1jmv_A USPA, universal stress 44.5 46 0.0016 26.4 6.2 44 271-315 91-140 (141)
129 2wqp_A Polysialic acid capsule 44.5 1.1E+02 0.0038 30.0 9.9 149 51-230 19-188 (349)
130 3ks6_A Glycerophosphoryl diest 44.0 60 0.0021 29.6 7.6 52 168-239 193-244 (250)
131 4adt_A Pyridoxine biosynthetic 43.8 42 0.0014 32.3 6.6 143 106-288 69-237 (297)
132 3i65_A Dihydroorotate dehydrog 43.7 1E+02 0.0034 31.1 9.7 108 122-246 268-395 (415)
133 1eye_A DHPS 1, dihydropteroate 43.5 97 0.0033 29.4 9.1 91 206-313 35-132 (280)
134 3zwt_A Dihydroorotate dehydrog 43.4 1.5E+02 0.0052 29.0 10.8 108 121-246 219-348 (367)
135 3i42_A Response regulator rece 43.3 89 0.0031 23.8 7.6 62 274-335 39-107 (127)
136 3vzx_A Heptaprenylglyceryl pho 43.3 20 0.00067 33.4 4.0 59 136-219 22-81 (228)
137 1zcc_A Glycerophosphodiester p 42.9 58 0.002 29.6 7.3 51 168-238 183-234 (248)
138 2pqm_A Cysteine synthase; OASS 42.7 1E+02 0.0035 29.5 9.4 121 170-316 92-221 (343)
139 4h27_A L-serine dehydratase/L- 42.7 1.1E+02 0.0037 29.7 9.6 118 170-315 107-233 (364)
140 4aec_A Cysteine synthase, mito 42.4 58 0.002 32.9 7.7 123 170-315 189-317 (430)
141 3m5v_A DHDPS, dihydrodipicolin 42.0 2.1E+02 0.0073 26.9 11.4 103 133-245 28-135 (301)
142 1jub_A Dihydroorotate dehydrog 41.5 97 0.0033 29.0 8.8 60 170-246 230-292 (311)
143 2rkb_A Serine dehydratase-like 41.3 1.9E+02 0.0066 27.0 10.9 117 170-315 68-193 (318)
144 1y7l_A O-acetylserine sulfhydr 41.2 77 0.0026 29.8 8.1 121 170-316 76-207 (316)
145 1jbq_A B, cystathionine beta-s 41.1 53 0.0018 33.1 7.2 127 170-316 175-307 (435)
146 1oy0_A Ketopantoate hydroxymet 41.1 2.4E+02 0.0083 26.8 14.4 69 277-352 187-262 (281)
147 2egu_A Cysteine synthase; O-ac 41.0 93 0.0032 29.1 8.6 123 170-316 79-207 (308)
148 3qja_A IGPS, indole-3-glycerol 41.0 1.1E+02 0.0037 28.8 9.0 131 52-222 52-191 (272)
149 1eep_A Inosine 5'-monophosphat 40.9 1E+02 0.0035 30.2 9.2 76 124-222 143-224 (404)
150 4ew6_A D-galactose-1-dehydroge 40.9 51 0.0017 31.3 6.8 58 135-212 69-130 (330)
151 1tv5_A Dhodehase, dihydroorota 40.6 79 0.0027 32.0 8.4 88 121-220 295-402 (443)
152 3eul_A Possible nitrate/nitrit 40.4 1.4E+02 0.0046 23.7 8.8 58 277-334 56-119 (152)
153 2nv1_A Pyridoxal biosynthesis 40.2 94 0.0032 29.2 8.5 150 52-242 22-173 (305)
154 3loq_A Universal stress protei 40.1 1.1E+02 0.0038 27.6 8.8 81 277-373 118-207 (294)
155 2gm3_A Unknown protein; AT3G01 39.8 57 0.002 27.1 6.3 44 271-315 113-165 (175)
156 1jcn_A Inosine monophosphate d 39.7 1.9E+02 0.0067 29.1 11.3 65 134-221 256-325 (514)
157 1tqx_A D-ribulose-5-phosphate 39.5 99 0.0034 28.3 8.3 107 116-240 110-221 (227)
158 1geq_A Tryptophan synthase alp 39.5 1.8E+02 0.0061 25.9 10.0 108 105-241 70-188 (248)
159 2xhz_A KDSD, YRBH, arabinose 5 39.5 23 0.00078 30.2 3.7 34 282-316 96-134 (183)
160 3sz8_A 2-dehydro-3-deoxyphosph 39.4 79 0.0027 30.3 7.7 90 107-222 80-170 (285)
161 3nhm_A Response regulator; pro 39.2 1.3E+02 0.0043 23.0 9.8 61 275-335 40-107 (133)
162 3fg9_A Protein of universal st 39.2 40 0.0014 27.5 5.1 40 271-311 107-155 (156)
163 1ep3_A Dihydroorotate dehydrog 39.0 1.1E+02 0.0037 28.4 8.6 41 170-222 231-272 (311)
164 2qv0_A Protein MRKE; structura 38.8 1.2E+02 0.0041 23.6 7.8 78 276-358 49-131 (143)
165 2qr3_A Two-component system re 38.7 1.3E+02 0.0045 23.1 8.0 59 276-334 41-110 (140)
166 1jw9_B Molybdopterin biosynthe 38.5 65 0.0022 29.5 6.9 65 108-185 88-152 (249)
167 3fij_A LIN1909 protein; 11172J 38.5 73 0.0025 29.2 7.2 62 119-184 40-113 (254)
168 1tzj_A ACC deaminase, 1-aminoc 38.4 2.1E+02 0.0073 26.8 10.8 42 273-315 175-226 (338)
169 2dqw_A Dihydropteroate synthas 38.3 1.7E+02 0.0059 27.9 10.0 126 206-361 58-192 (294)
170 1wa3_A 2-keto-3-deoxy-6-phosph 38.2 1.2E+02 0.0041 26.3 8.3 79 106-220 51-131 (205)
171 3cu2_A Ribulose-5-phosphate 3- 38.0 59 0.002 30.1 6.5 103 120-239 126-235 (237)
172 3hgj_A Chromate reductase; TIM 38.0 1.3E+02 0.0045 29.0 9.3 96 106-220 208-318 (349)
173 1v8a_A Hydroxyethylthiazole ki 37.7 38 0.0013 31.5 5.2 45 135-184 47-91 (265)
174 1o66_A 3-methyl-2-oxobutanoate 37.4 2.8E+02 0.0094 26.4 12.6 46 277-323 169-214 (275)
175 3jte_A Response regulator rece 37.4 1.3E+02 0.0044 23.4 7.8 56 280-335 47-108 (143)
176 1f2d_A 1-aminocyclopropane-1-c 37.4 2.7E+02 0.0092 26.3 11.4 130 170-315 83-229 (341)
177 1q77_A Hypothetical protein AQ 37.3 30 0.001 27.6 3.9 41 270-311 97-137 (138)
178 3eod_A Protein HNR; response r 37.0 96 0.0033 23.7 6.8 62 274-335 43-110 (130)
179 1ve5_A Threonine deaminase; ri 36.9 2E+02 0.0068 26.7 10.2 119 170-315 79-206 (311)
180 3fs2_A 2-dehydro-3-deoxyphosph 36.4 77 0.0026 30.6 7.2 89 107-221 101-190 (298)
181 1v71_A Serine racemase, hypoth 36.3 1.6E+02 0.0055 27.7 9.5 119 170-315 88-211 (323)
182 2q3b_A Cysteine synthase A; py 36.2 1.4E+02 0.0049 27.8 9.1 119 171-315 82-209 (313)
183 2v03_A Cysteine synthase B; py 36.0 94 0.0032 29.1 7.7 120 170-316 75-203 (303)
184 2e6f_A Dihydroorotate dehydrog 35.9 1.1E+02 0.0036 28.7 8.1 59 170-245 233-293 (314)
185 3dlo_A Universal stress protei 35.8 80 0.0027 26.0 6.5 41 270-311 105-154 (155)
186 3f4w_A Putative hexulose 6 pho 35.3 77 0.0026 27.6 6.6 88 106-220 43-134 (211)
187 3f6c_A Positive transcription 35.0 1.4E+02 0.0049 22.7 7.6 56 279-334 43-104 (134)
188 3qvq_A Phosphodiesterase OLEI0 34.9 75 0.0026 29.0 6.7 49 169-237 200-248 (252)
189 3dzv_A 4-methyl-5-(beta-hydrox 34.8 49 0.0017 31.3 5.4 45 135-184 49-93 (273)
190 3afo_A NADH kinase POS5; alpha 34.8 18 0.00061 36.2 2.5 34 281-314 227-264 (388)
191 1tzb_A Glucose-6-phosphate iso 34.7 31 0.0011 32.5 4.1 39 281-320 78-121 (302)
192 2qjg_A Putative aldolase MJ040 34.6 1.4E+02 0.0048 27.1 8.5 81 135-220 102-186 (273)
193 4e7p_A Response regulator; DNA 34.6 1E+02 0.0035 24.4 6.8 60 275-334 59-124 (150)
194 4had_A Probable oxidoreductase 34.4 75 0.0026 29.9 6.8 85 134-242 74-161 (350)
195 1ydo_A HMG-COA lyase; TIM-barr 34.2 2.8E+02 0.0097 26.2 10.9 115 121-242 73-198 (307)
196 3l49_A ABC sugar (ribose) tran 34.0 1.5E+02 0.005 26.3 8.4 68 106-185 23-92 (291)
197 1gte_A Dihydropyrimidine dehyd 33.9 1.7E+02 0.0057 32.5 10.4 87 122-220 634-735 (1025)
198 3sho_A Transcriptional regulat 33.9 30 0.001 29.6 3.5 34 282-316 87-125 (187)
199 3mil_A Isoamyl acetate-hydroly 33.8 90 0.0031 26.8 6.7 55 132-186 57-120 (240)
200 3h8v_A Ubiquitin-like modifier 33.5 66 0.0023 30.7 6.2 67 107-185 91-168 (292)
201 1zud_1 Adenylyltransferase THI 33.5 1.3E+02 0.0044 27.5 8.1 65 108-185 85-149 (251)
202 2ftp_A Hydroxymethylglutaryl-C 33.4 3E+02 0.01 25.7 12.1 115 121-242 75-200 (302)
203 2vws_A YFAU, 2-keto-3-deoxy su 33.3 1.9E+02 0.0064 26.8 9.2 87 110-220 9-97 (267)
204 1yad_A Regulatory protein TENI 33.1 2.5E+02 0.0085 24.6 12.1 113 106-241 100-213 (221)
205 1o58_A O-acetylserine sulfhydr 32.5 1.6E+02 0.0054 27.5 8.6 120 170-316 79-208 (303)
206 1vcv_A Probable deoxyribose-ph 32.4 55 0.0019 30.2 5.2 118 107-244 41-182 (226)
207 3grc_A Sensor protein, kinase; 32.2 1.7E+02 0.0059 22.5 9.6 62 274-335 42-112 (140)
208 3bo9_A Putative nitroalkan dio 32.1 1.9E+02 0.0064 27.5 9.3 80 122-220 124-205 (326)
209 3b2n_A Uncharacterized protein 32.1 1.7E+02 0.0059 22.5 7.7 56 279-334 46-107 (133)
210 1rd5_A Tryptophan synthase alp 32.1 1.8E+02 0.0062 26.4 8.8 107 106-242 85-199 (262)
211 3evn_A Oxidoreductase, GFO/IDH 32.0 86 0.0029 29.4 6.7 85 134-242 55-142 (329)
212 3oa3_A Aldolase; structural ge 32.0 2.1E+02 0.0072 27.4 9.4 144 154-310 63-239 (288)
213 3e9m_A Oxidoreductase, GFO/IDH 32.0 1.1E+02 0.0036 28.9 7.4 85 134-242 55-142 (330)
214 1ypf_A GMP reductase; GUAC, pu 31.9 61 0.0021 31.1 5.8 131 169-331 84-237 (336)
215 3igs_A N-acetylmannosamine-6-p 31.9 88 0.003 28.5 6.6 49 178-241 180-228 (232)
216 3kux_A Putative oxidoreductase 31.9 77 0.0026 30.1 6.4 84 135-242 56-142 (352)
217 3qtg_A Pyruvate kinase, PK; TI 31.7 3.3E+02 0.011 27.8 11.3 38 47-85 12-53 (461)
218 3ble_A Citramalate synthase fr 31.6 1.1E+02 0.0038 29.4 7.6 115 122-243 89-211 (337)
219 3tb6_A Arabinose metabolism tr 31.6 1.7E+02 0.0058 25.8 8.4 78 100-186 27-106 (298)
220 3cg4_A Response regulator rece 31.4 1.8E+02 0.0061 22.4 8.5 79 275-357 44-130 (142)
221 3odp_A Putative tagatose-6-pho 31.4 17 0.0006 36.0 1.7 41 282-322 108-156 (393)
222 3mt0_A Uncharacterized protein 31.3 2.3E+02 0.0078 25.5 9.4 85 272-374 79-179 (290)
223 1gox_A (S)-2-hydroxy-acid oxid 31.1 1.9E+02 0.0063 28.2 9.2 90 105-221 215-310 (370)
224 1m3s_A Hypothetical protein YC 31.0 34 0.0011 29.3 3.4 34 282-316 79-117 (186)
225 1o60_A 2-dehydro-3-deoxyphosph 31.0 1.4E+02 0.0049 28.3 8.1 134 52-219 19-165 (292)
226 3m2t_A Probable dehydrogenase; 30.9 1E+02 0.0036 29.4 7.3 58 135-212 57-117 (359)
227 1y8q_A Ubiquitin-like 1 activa 30.8 1.1E+02 0.0038 29.6 7.4 116 50-185 35-156 (346)
228 1h1y_A D-ribulose-5-phosphate 30.6 2.7E+02 0.0094 24.6 9.6 141 63-240 20-168 (228)
229 1vrd_A Inosine-5'-monophosphat 30.4 4E+02 0.014 26.6 11.8 81 122-223 225-309 (494)
230 2rjn_A Response regulator rece 30.4 2E+02 0.0068 22.7 8.9 61 275-335 44-111 (154)
231 8abp_A L-arabinose-binding pro 30.4 69 0.0024 28.8 5.6 71 102-185 16-88 (306)
232 3ip3_A Oxidoreductase, putativ 30.3 80 0.0027 29.7 6.2 84 135-242 56-144 (337)
233 3u3x_A Oxidoreductase; structu 29.9 97 0.0033 29.7 6.8 85 134-241 76-163 (361)
234 1ydn_A Hydroxymethylglutaryl-C 29.8 1.2E+02 0.0039 28.4 7.2 88 203-294 82-180 (295)
235 3v5n_A Oxidoreductase; structu 29.8 74 0.0025 31.2 6.0 85 134-242 93-185 (417)
236 3hp4_A GDSL-esterase; psychrot 29.7 86 0.0029 25.9 5.7 55 132-186 52-110 (185)
237 2qkf_A 3-deoxy-D-manno-octulos 29.6 1.9E+02 0.0064 27.3 8.6 134 52-219 16-162 (280)
238 1tqj_A Ribulose-phosphate 3-ep 29.5 1E+02 0.0035 27.8 6.6 105 118-238 110-219 (230)
239 3idf_A USP-like protein; unive 29.5 47 0.0016 26.2 3.8 37 272-311 93-137 (138)
240 3ohs_X Trans-1,2-dihydrobenzen 29.2 1.1E+02 0.0038 28.7 7.0 84 135-242 55-141 (334)
241 1jub_A Dihydroorotate dehydrog 29.0 3.2E+02 0.011 25.3 10.1 19 273-291 176-194 (311)
242 2vp8_A Dihydropteroate synthas 28.9 95 0.0033 30.1 6.5 93 205-313 70-168 (318)
243 3jy6_A Transcriptional regulat 28.7 1.5E+02 0.0051 26.2 7.5 69 102-185 21-91 (276)
244 3daq_A DHDPS, dihydrodipicolin 28.6 1.8E+02 0.0062 27.2 8.4 64 118-185 67-134 (292)
245 3b4u_A Dihydrodipicolinate syn 28.6 3.4E+02 0.011 25.4 10.2 98 132-243 23-129 (294)
246 2wkj_A N-acetylneuraminate lya 28.5 3.7E+02 0.013 25.2 12.4 101 133-244 32-137 (303)
247 2bdq_A Copper homeostasis prot 28.3 2.3E+02 0.0079 26.1 8.7 137 175-333 50-207 (224)
248 3igs_A N-acetylmannosamine-6-p 28.2 2.8E+02 0.0095 25.1 9.3 87 104-218 58-154 (232)
249 1tx2_A DHPS, dihydropteroate s 28.2 1.7E+02 0.006 27.9 8.2 127 207-369 70-203 (297)
250 4fb5_A Probable oxidoreductase 28.2 95 0.0033 29.2 6.4 84 135-242 83-169 (393)
251 3olq_A Universal stress protei 28.1 2.2E+02 0.0074 25.8 8.7 88 271-374 100-203 (319)
252 1xi3_A Thiamine phosphate pyro 28.1 2.8E+02 0.0097 23.7 10.9 52 177-241 160-211 (215)
253 1tk9_A Phosphoheptose isomeras 28.1 35 0.0012 29.1 2.9 34 282-316 110-148 (188)
254 2ekc_A AQ_1548, tryptophan syn 27.9 1.3E+02 0.0043 27.8 7.0 78 134-220 33-129 (262)
255 3f6p_A Transcriptional regulat 27.8 2E+02 0.0067 21.7 7.4 61 274-335 38-104 (120)
256 3ca8_A Protein YDCF; two domai 27.8 1.5E+02 0.0051 27.8 7.5 48 318-372 102-152 (266)
257 2gjl_A Hypothetical protein PA 27.6 3.3E+02 0.011 25.5 10.1 62 136-224 87-149 (328)
258 3qze_A DHDPS, dihydrodipicolin 27.6 4E+02 0.014 25.2 11.4 96 139-245 51-150 (314)
259 2r48_A Phosphotransferase syst 27.4 16 0.00053 30.2 0.5 53 116-184 25-81 (106)
260 1nvm_A HOA, 4-hydroxy-2-oxoval 27.3 2.5E+02 0.0086 26.9 9.3 156 64-243 32-191 (345)
261 4d9b_A D-cysteine desulfhydras 27.3 2.7E+02 0.0092 26.4 9.4 43 273-315 186-236 (342)
262 3gl9_A Response regulator; bet 27.2 2.1E+02 0.007 21.8 8.0 62 274-335 38-107 (122)
263 4dbe_A Orotidine 5'-phosphate 27.1 3E+02 0.01 24.8 9.3 41 200-240 167-207 (222)
264 3hpd_A Hydroxyethylthiazole ki 27.1 1E+02 0.0035 29.0 6.2 45 135-184 47-91 (265)
265 3luf_A Two-component system re 27.1 3.4E+02 0.012 24.2 11.4 62 291-356 182-247 (259)
266 3uuw_A Putative oxidoreductase 26.8 1.2E+02 0.004 28.0 6.6 58 135-212 57-115 (308)
267 1dxe_A 2-dehydro-3-deoxy-galac 26.8 1.7E+02 0.0059 26.8 7.7 89 109-220 9-98 (256)
268 3e96_A Dihydrodipicolinate syn 26.7 2.1E+02 0.0071 27.2 8.4 65 117-185 76-143 (316)
269 3ngj_A Deoxyribose-phosphate a 26.6 1E+02 0.0035 28.7 6.1 144 154-310 32-205 (239)
270 2v82_A 2-dehydro-3-deoxy-6-pho 26.4 3.1E+02 0.011 23.6 9.2 81 106-219 45-127 (212)
271 3dz1_A Dihydrodipicolinate syn 26.4 4.1E+02 0.014 25.0 11.8 99 133-244 29-132 (313)
272 1ekq_A Hydroxyethylthiazole ki 26.2 1E+02 0.0035 28.5 6.0 45 136-185 50-94 (272)
273 2qjg_A Putative aldolase MJ040 26.1 3.6E+02 0.012 24.3 12.3 78 145-242 180-259 (273)
274 3no3_A Glycerophosphodiester p 26.0 96 0.0033 28.0 5.7 50 168-237 185-234 (238)
275 3l5l_A Xenobiotic reductase A; 25.9 1.7E+02 0.0057 28.4 7.8 95 106-220 214-325 (363)
276 3na8_A Putative dihydrodipicol 25.9 4.3E+02 0.015 25.0 11.0 102 131-243 43-149 (315)
277 3ezy_A Dehydrogenase; structur 25.8 1.4E+02 0.0048 28.0 7.1 58 135-212 53-113 (344)
278 1vim_A Hypothetical protein AF 25.8 30 0.001 30.4 2.1 34 282-316 89-127 (200)
279 1jeo_A MJ1247, hypothetical pr 25.7 45 0.0015 28.2 3.2 34 282-316 82-120 (180)
280 3gdo_A Uncharacterized oxidore 25.7 91 0.0031 29.7 5.7 84 135-242 54-140 (358)
281 3q58_A N-acetylmannosamine-6-p 25.6 3.7E+02 0.013 24.2 9.8 105 106-238 60-179 (229)
282 3gv0_A Transcriptional regulat 25.5 1.1E+02 0.0038 27.3 6.0 70 102-185 24-95 (288)
283 3fhl_A Putative oxidoreductase 25.5 78 0.0027 30.2 5.2 83 135-242 54-140 (362)
284 4d9i_A Diaminopropionate ammon 25.3 2.5E+02 0.0085 27.3 9.0 122 170-315 126-262 (398)
285 1tjy_A Sugar transport protein 25.3 1.1E+02 0.0039 27.9 6.2 74 100-185 15-91 (316)
286 3tml_A 2-dehydro-3-deoxyphosph 25.2 1.4E+02 0.0048 28.5 6.9 90 107-222 77-173 (288)
287 2pz0_A Glycerophosphoryl diest 25.0 61 0.0021 29.5 4.1 49 168-236 200-248 (252)
288 1y0e_A Putative N-acetylmannos 24.7 3.4E+02 0.012 23.5 10.1 137 63-237 76-218 (223)
289 1l9x_A Gamma-glutamyl hydrolas 24.7 2E+02 0.0067 27.3 7.8 64 116-184 61-129 (315)
290 1z0s_A Probable inorganic poly 24.6 28 0.00096 33.2 1.8 34 280-313 170-207 (278)
291 2wkj_A N-acetylneuraminate lya 24.6 2.7E+02 0.0091 26.3 8.7 63 119-184 77-143 (303)
292 3g1w_A Sugar ABC transporter; 24.5 84 0.0029 28.2 5.0 72 102-185 18-92 (305)
293 3q2i_A Dehydrogenase; rossmann 24.4 1.3E+02 0.0044 28.4 6.5 84 135-242 64-150 (354)
294 3hdv_A Response regulator; PSI 24.4 2.3E+02 0.0077 21.6 7.1 53 283-335 53-112 (136)
295 3fkr_A L-2-keto-3-deoxyarabona 24.3 1.8E+02 0.0061 27.6 7.5 63 119-184 74-142 (309)
296 3ctl_A D-allulose-6-phosphate 24.1 4E+02 0.014 24.1 10.1 106 106-239 48-157 (231)
297 2qsj_A DNA-binding response re 24.0 1.9E+02 0.0064 22.8 6.6 59 276-334 43-108 (154)
298 3e18_A Oxidoreductase; dehydro 24.0 1.3E+02 0.0043 28.8 6.4 83 135-242 54-140 (359)
299 1moq_A Glucosamine 6-phosphate 24.0 33 0.0011 33.3 2.2 40 282-321 99-145 (368)
300 3flu_A DHDPS, dihydrodipicolin 24.0 4.4E+02 0.015 24.5 12.0 103 131-243 26-132 (297)
301 3moi_A Probable dehydrogenase; 23.9 1.1E+02 0.0037 29.5 6.0 84 135-242 53-139 (387)
302 3e82_A Putative oxidoreductase 23.9 1.1E+02 0.0039 29.1 6.1 84 135-242 56-142 (364)
303 3cu5_A Two component transcrip 23.9 2.6E+02 0.0088 21.8 8.2 61 275-335 42-108 (141)
304 1zh8_A Oxidoreductase; TM0312, 23.9 1.5E+02 0.005 28.0 6.8 85 134-242 70-157 (340)
305 3kht_A Response regulator; PSI 23.8 2.5E+02 0.0087 21.7 8.2 61 274-334 43-111 (144)
306 1f6k_A N-acetylneuraminate lya 23.7 4.5E+02 0.015 24.4 11.7 103 132-245 23-131 (293)
307 2cw6_A Hydroxymethylglutaryl-C 23.6 2.9E+02 0.0099 25.8 8.8 114 123-243 74-198 (298)
308 1tmy_A CHEY protein, TMY; chem 23.5 2.3E+02 0.0078 21.0 7.9 57 279-335 44-106 (120)
309 3mz0_A Inositol 2-dehydrogenas 23.4 1.1E+02 0.0039 28.7 5.9 85 134-242 54-142 (344)
310 3rot_A ABC sugar transporter, 23.4 1.8E+02 0.006 26.1 7.0 72 102-185 17-92 (297)
311 3cg0_A Response regulator rece 23.4 2.5E+02 0.0085 21.4 8.3 57 277-334 49-112 (140)
312 3u7r_A NADPH-dependent FMN red 23.2 1.2E+02 0.0041 26.8 5.6 50 131-185 54-110 (190)
313 3oqb_A Oxidoreductase; structu 23.1 1.4E+02 0.005 28.4 6.6 84 135-242 72-158 (383)
314 3uug_A Multiple sugar-binding 23.1 1.5E+02 0.005 26.9 6.5 74 100-185 15-90 (330)
315 1l6w_A Fructose-6-phosphate al 23.0 19 0.00065 33.2 0.2 55 102-163 3-64 (220)
316 2e5f_A Hypothetical protein PH 23.0 53 0.0018 31.2 3.4 36 284-321 81-120 (325)
317 3eqz_A Response regulator; str 22.9 1.9E+02 0.0066 21.8 6.3 53 283-335 47-110 (135)
318 3cwc_A Putative glycerate kina 22.9 81 0.0028 31.5 4.8 58 124-184 267-324 (383)
319 2r4q_A Phosphotransferase syst 22.9 16 0.00054 30.1 -0.3 53 116-184 25-81 (106)
320 3dty_A Oxidoreductase, GFO/IDH 22.9 1.3E+02 0.0044 29.1 6.3 85 134-242 68-160 (398)
321 4f3y_A DHPR, dihydrodipicolina 22.8 87 0.003 29.4 4.8 83 136-246 65-147 (272)
322 3b4u_A Dihydrodipicolinate syn 22.7 3.3E+02 0.011 25.4 8.9 67 118-184 68-138 (294)
323 3ab8_A Putative uncharacterize 22.7 3.3E+02 0.011 23.9 8.6 65 280-358 107-181 (268)
324 2r8w_A AGR_C_1641P; APC7498, d 22.6 5.1E+02 0.017 24.7 11.9 95 139-244 62-160 (332)
325 3dwg_A Cysteine synthase B; su 22.6 3.7E+02 0.013 25.3 9.4 19 351-372 168-186 (325)
326 2hqr_A Putative transcriptiona 22.5 1.3E+02 0.0045 25.6 5.7 60 274-334 36-98 (223)
327 1wkv_A Cysteine synthase; homo 22.5 2.3E+02 0.0077 27.9 8.0 118 170-315 159-289 (389)
328 2rfg_A Dihydrodipicolinate syn 22.5 2.5E+02 0.0084 26.4 8.0 62 119-184 66-131 (297)
329 3hdg_A Uncharacterized protein 22.4 2.6E+02 0.0089 21.3 7.5 56 279-334 48-109 (137)
330 1srr_A SPO0F, sporulation resp 22.4 2.5E+02 0.0084 21.0 7.4 56 279-334 44-105 (124)
331 2ehh_A DHDPS, dihydrodipicolin 22.3 4.7E+02 0.016 24.3 12.3 102 132-244 20-126 (294)
332 4ef8_A Dihydroorotate dehydrog 22.2 2.1E+02 0.0072 27.9 7.6 38 204-247 290-328 (354)
333 3gr7_A NADPH dehydrogenase; fl 22.2 3E+02 0.01 26.4 8.7 93 106-220 200-307 (340)
334 2a3n_A Putative glucosamine-fr 22.2 54 0.0019 31.6 3.4 33 282-315 102-139 (355)
335 3trj_A Phosphoheptose isomeras 22.2 49 0.0017 29.3 2.8 34 282-316 114-152 (201)
336 1m3u_A 3-methyl-2-oxobutanoate 22.1 4.9E+02 0.017 24.4 13.9 46 277-323 169-214 (264)
337 1tt5_A APPBP1, amyloid protein 22.1 86 0.0029 32.4 5.0 66 108-185 89-155 (531)
338 2yxg_A DHDPS, dihydrodipicolin 22.1 2.8E+02 0.0094 25.9 8.2 62 119-184 66-131 (289)
339 3bo9_A Putative nitroalkan dio 22.0 5E+02 0.017 24.4 11.0 60 136-222 93-153 (326)
340 3s5o_A 4-hydroxy-2-oxoglutarat 22.0 2.4E+02 0.0084 26.6 7.9 66 117-185 78-148 (307)
341 1wsa_A Asparaginase, asparagin 22.0 64 0.0022 31.3 3.8 50 138-194 232-283 (330)
342 3i23_A Oxidoreductase, GFO/IDH 22.0 1.1E+02 0.0036 29.1 5.3 84 135-242 54-140 (349)
343 2wlt_A L-asparaginase; hydrola 22.0 63 0.0022 31.3 3.8 50 138-194 235-286 (332)
344 2gjl_A Hypothetical protein PA 21.9 3.2E+02 0.011 25.7 8.7 78 122-220 118-201 (328)
345 3o9z_A Lipopolysaccaride biosy 21.9 1.2E+02 0.0041 28.4 5.7 75 144-242 72-147 (312)
346 3r0j_A Possible two component 21.8 4E+02 0.014 23.2 9.5 60 276-335 61-126 (250)
347 3b0p_A TRNA-dihydrouridine syn 21.8 2.1E+02 0.0071 27.6 7.5 29 179-220 197-225 (350)
348 2jk1_A HUPR, hydrogenase trans 21.8 2.8E+02 0.0094 21.3 8.2 61 275-335 37-104 (139)
349 1o7j_A L-asparaginase; atomic 21.7 65 0.0022 31.2 3.8 51 138-194 234-285 (327)
350 3tak_A DHDPS, dihydrodipicolin 21.5 4.9E+02 0.017 24.1 12.0 102 133-245 22-128 (291)
351 3g68_A Putative phosphosugar i 21.5 50 0.0017 32.0 2.9 33 282-315 82-119 (352)
352 3kto_A Response regulator rece 21.5 1.8E+02 0.0061 22.5 5.9 39 296-334 71-110 (136)
353 4hkt_A Inositol 2-dehydrogenas 21.4 1.6E+02 0.0055 27.4 6.4 84 135-242 52-138 (331)
354 2yva_A DNAA initiator-associat 21.3 51 0.0018 28.3 2.7 34 282-316 109-147 (196)
355 2r8w_A AGR_C_1641P; APC7498, d 21.3 2.9E+02 0.01 26.4 8.4 62 119-184 100-165 (332)
356 3q9s_A DNA-binding response re 21.2 3.5E+02 0.012 23.8 8.5 60 275-335 74-139 (249)
357 3l12_A Putative glycerophospho 21.2 5E+02 0.017 24.1 12.2 49 169-237 258-306 (313)
358 3qze_A DHDPS, dihydrodipicolin 21.2 3E+02 0.01 26.1 8.4 65 117-185 87-155 (314)
359 1nns_A L-asparaginase II; amid 21.0 69 0.0023 31.0 3.8 52 137-194 227-279 (326)
360 3etn_A Putative phosphosugar i 21.0 53 0.0018 29.4 2.8 35 282-316 106-146 (220)
361 3c3j_A Putative tagatose-6-pho 20.9 36 0.0012 33.3 1.7 40 282-321 103-150 (384)
362 2pln_A HP1043, response regula 20.9 2.7E+02 0.0091 21.3 6.8 57 277-334 57-116 (137)
363 3euw_A MYO-inositol dehydrogen 20.9 1.3E+02 0.0045 28.2 5.8 58 135-212 54-114 (344)
364 3h75_A Periplasmic sugar-bindi 20.8 1.9E+02 0.0064 26.7 6.8 72 101-185 17-92 (350)
365 3n0r_A Response regulator; sig 20.7 3.4E+02 0.012 24.9 8.5 60 274-335 197-262 (286)
366 3cz5_A Two-component response 20.7 2.1E+02 0.0071 22.5 6.2 61 275-335 44-110 (153)
367 3a5f_A Dihydrodipicolinate syn 20.6 3.6E+02 0.012 25.1 8.7 99 132-241 21-124 (291)
368 2fep_A Catabolite control prot 20.6 2.9E+02 0.01 24.5 7.9 72 100-185 28-101 (289)
369 3ewb_X 2-isopropylmalate synth 20.6 3.2E+02 0.011 25.7 8.3 151 63-242 28-191 (293)
370 2w6r_A Imidazole glycerol phos 20.6 4.5E+02 0.015 23.4 10.9 60 170-229 160-238 (266)
371 2rfg_A Dihydrodipicolinate syn 20.6 5.2E+02 0.018 24.1 11.4 102 132-244 20-126 (297)
372 3bw2_A 2-nitropropane dioxygen 20.6 2.9E+02 0.01 26.5 8.3 92 107-220 138-237 (369)
373 1j5x_A Glucosamine-6-phosphate 20.5 50 0.0017 31.7 2.7 38 284-322 102-146 (342)
374 3knz_A Putative sugar binding 20.4 50 0.0017 32.2 2.7 40 281-321 96-142 (366)
375 3tak_A DHDPS, dihydrodipicolin 20.4 2.5E+02 0.0087 26.2 7.6 64 118-185 66-133 (291)
376 2xbl_A Phosphoheptose isomeras 20.4 53 0.0018 28.1 2.6 33 282-315 116-153 (198)
377 2vc6_A MOSA, dihydrodipicolina 20.4 5.2E+02 0.018 24.0 11.0 102 131-242 19-124 (292)
378 2ioy_A Periplasmic sugar-bindi 20.4 1.7E+02 0.006 25.9 6.2 72 102-185 15-88 (283)
379 3d0c_A Dihydrodipicolinate syn 20.3 4.1E+02 0.014 25.1 9.1 103 131-244 31-137 (314)
380 2b4a_A BH3024; flavodoxin-like 20.2 2.4E+02 0.008 21.7 6.4 51 281-334 59-115 (138)
381 1f6k_A N-acetylneuraminate lya 20.2 4.2E+02 0.014 24.6 9.1 62 119-184 70-135 (293)
382 4gmf_A Yersiniabactin biosynth 20.2 39 0.0013 33.2 1.9 67 136-219 58-124 (372)
383 1x92_A APC5045, phosphoheptose 20.2 56 0.0019 28.2 2.7 34 282-316 113-151 (199)
384 2ehh_A DHDPS, dihydrodipicolin 20.1 3.2E+02 0.011 25.5 8.3 62 119-184 66-131 (294)
385 3d8u_A PURR transcriptional re 20.0 2.7E+02 0.0091 24.3 7.3 65 107-185 22-88 (275)
386 2v9d_A YAGE; dihydrodipicolini 20.0 5.8E+02 0.02 24.4 12.2 101 131-241 50-154 (343)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=1.2e-110 Score=874.34 Aligned_cols=371 Identities=56% Similarity=0.903 Sum_probs=345.4
Q ss_pred cCCCCchhhhhccccchhhhcccCCCCCCCcccccceeEEEeCCCCCCHHHHHHHHHhcccccc--cCCCC---------
Q psy259 17 DGYVPPSQLRALAANTFVDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETESNSDE--CSEKP--------- 85 (398)
Q Consensus 17 ~~~~~~~~~~~~~~~t~l~h~~~L~i~~~~~~~r~t~Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~--------- 85 (398)
..|+++||+++++++|+|+|+|.|+|+++|...|+|||||||||+|+++|+|++|+++||||-+ |||+.
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~ 108 (550)
T 3gr4_A 29 TAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIK 108 (550)
T ss_dssp ---CCSTTHHHHTCSSHHHHHHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHH
T ss_pred ccccchhhhcccccccHHHHhhccCCCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHH
Confidence 7789999999999999999999999999999999999999999999999999999999999933 77752
Q ss_pred ----------------CC--------CC----C--------CC---------------CCCCCCCCcccHH---------
Q psy259 86 ----------------RE--------CP----S--------EP---------------EPPHCKEPNLYES--------- 105 (398)
Q Consensus 86 ----------------~p--------gp----~--------~~---------------~~~k~~~~~~~vd--------- 105 (398)
+| || + ++ |.++|+++.+|||
T Consensus 109 ~iR~a~~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~ 188 (550)
T 3gr4_A 109 NVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVE 188 (550)
T ss_dssp HHHHHHHTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCC
T ss_pred HHHHHHHhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcC
Confidence 33 66 0 11 3346777777754
Q ss_pred --------------------------------------------------------------------------------
Q psy259 106 -------------------------------------------------------------------------------- 105 (398)
Q Consensus 106 -------------------------------------------------------------------------------- 105 (398)
T Consensus 189 ~Gd~IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~ 268 (550)
T 3gr4_A 189 VGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAS 268 (550)
T ss_dssp TTCEEEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHH
T ss_pred CCCEEEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHH
Confidence
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
||+++|++ |++.|.+++||||||+++||+|+|||++++|||||||||||+|+|.++||.+||+||++|+++|||||+|
T Consensus 269 Dv~~~r~~--L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~A 346 (550)
T 3gr4_A 269 DVHEVRKV--LGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICA 346 (550)
T ss_dssp HHHHHHHH--HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH--HHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999 9988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCC
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPID 265 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 265 (398)
|||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+.++|.++|..+....+.+.+
T Consensus 347 TQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 426 (550)
T 3gr4_A 347 TQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSD 426 (550)
T ss_dssp SSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCC
T ss_pred ehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998888888877655556678
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHH
Q psy259 266 SAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVD 345 (398)
Q Consensus 266 ~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d 345 (398)
..+++|.+|+++|++++|+|||++|+||+||+++|||||+|||||+|++++++|||+|+|||+|++++....++|.+|.|
T Consensus 427 ~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d 506 (550)
T 3gr4_A 427 PTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVD 506 (550)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877788999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeccCCCCCCCcEEEEEEcC
Q psy259 346 TRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTVRIVYVS 389 (398)
Q Consensus 346 ~~I~~ai~~ake~Glik~GD~VVVvsG~~~g~G~tNtiRI~~v~ 389 (398)
+++++++++++++|++++||.||+++||+.|+|+||+|||++|+
T Consensus 507 ~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 507 LRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999999999999999999999999999999999999999874
No 2
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=4.6e-103 Score=811.03 Aligned_cols=354 Identities=43% Similarity=0.680 Sum_probs=319.0
Q ss_pred chh-hhcccCCCCCCCcccccceeEEEeCCCCCCHHHHHHHHHhcccccc--cCCCC-------------------CC--
Q psy259 32 TFV-DHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETESNSDE--CSEKP-------------------RE-- 87 (398)
Q Consensus 32 t~l-~h~~~L~i~~~~~~~r~t~Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~-------------------~p-- 87 (398)
++| +|++.|+++ ++...|+|||||||||+|+++|+|++|+++||||-+ |||+. +|
T Consensus 2 ~~~~~~~~~~~~~-~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~va 80 (499)
T 3hqn_D 2 SQLAHNLTLSIFD-PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIA 80 (499)
T ss_dssp CHHHHHHTCCTTS-CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred chHHHHHHhccCC-CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEE
Confidence 567 899999987 567899999999999999999999999999999944 99973 22
Q ss_pred ------CC----C------CC--------------CCCCCCCCcccHH--------------------------------
Q psy259 88 ------CP----S------EP--------------EPPHCKEPNLYES-------------------------------- 105 (398)
Q Consensus 88 ------gp----~------~~--------------~~~k~~~~~~~vd-------------------------------- 105 (398)
|| + ++ |..+|+++.+|++
T Consensus 81 Il~Dl~GPkIR~g~~~~~~~vL~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~ 160 (499)
T 3hqn_D 81 IALDTKGPEIRTGQFVGGDAVMERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQ 160 (499)
T ss_dssp EEEECCCCCCBBCCBGGGEEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETT
T ss_pred EEEeCCCCEEeeeccCCCCeEEcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCC
Confidence 77 0 01 2345666666654
Q ss_pred ----------------------------------------------------------HHHHHHHHhhchhcCCcccEEE
Q psy259 106 ----------------------------------------------------------NVRLIEKLMATGEQGKHIKIIA 127 (398)
Q Consensus 106 ----------------------------------------------------------dV~~ir~~~~l~~~~~~~~iia 127 (398)
||+++|++ |++.|.+++|||
T Consensus 161 ~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~--l~~~~~~i~Iia 238 (499)
T 3hqn_D 161 TLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKA--LGPKGRDIMIIC 238 (499)
T ss_dssp EEEEEECSCEEEETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH--HCGGGTTSEEEE
T ss_pred eEEEEEEeCcEeeCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH--HHhcCCCCeEEE
Confidence 99999999 988889999999
Q ss_pred eecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 128 KIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 128 KIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
|||+++||+|+|||++++|||||||||||+|+|.|+||.+||+||++|+++|||||+||||||||++||+|||||+||||
T Consensus 239 KIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVa 318 (499)
T 3hqn_D 239 KIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVA 318 (499)
T ss_dssp EECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHH
T ss_pred EECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEE
Q psy259 208 NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIV 287 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aII 287 (398)
|||+||+||||||||||.|+||+|||++|++||+++|+.++|...|..+....+.+.+..+++|.+|+++|++++|+|||
T Consensus 319 naV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv 398 (499)
T 3hqn_D 319 NAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMV 398 (499)
T ss_dssp HHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHcCCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999999999999999999999988888887766555556788999999999999999999999
Q ss_pred EECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHHHHHHHHHHHHcCCCCCCCeE
Q psy259 288 VLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPV 367 (398)
Q Consensus 288 v~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~~ake~Glik~GD~V 367 (398)
++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++....+. .+|.|++++.+++.++++|++++||.|
T Consensus 399 ~~T~SG~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~-~~~~d~~~~~a~~~~~~~g~~~~GD~v 477 (499)
T 3hqn_D 399 VLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGH-DEGKEHRVAAGVEFAKSKGYVQTGDYC 477 (499)
T ss_dssp EECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCC-CTTCHHHHHHHHHHHHHTTSCCTTCEE
T ss_pred EECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccc-cCCHHHHHHHHHHHHHHcCCCCCcCEE
Confidence 9999999999999999999999999999999999999999999987542111 357899999999999999999999999
Q ss_pred EEEeccCCCCCCCcEEEEEEcC
Q psy259 368 IVVTGWKKGAGFTNTVRIVYVS 389 (398)
Q Consensus 368 VVvsG~~~g~G~tNtiRI~~v~ 389 (398)
|+++|++.++|+||+|||+.|+
T Consensus 478 Vv~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 478 VVIHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp EEEEECC-----CEEEEEEECC
T ss_pred EEEeCCCCCCCCCeEEEEEEcC
Confidence 9999998889999999999874
No 3
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=2.6e-102 Score=810.33 Aligned_cols=276 Identities=48% Similarity=0.738 Sum_probs=258.0
Q ss_pred HHHHHHHHhhchhcC-------CcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc
Q psy259 106 NVRLIEKLMATGEQG-------KHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV 178 (398)
Q Consensus 106 dV~~ir~~~~l~~~~-------~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~ 178 (398)
||.++|++ |++.| .+++||||||+++|++|||||++++|||||||||||+|+|.|+||.+||+||++|+++
T Consensus 243 Dv~~~r~~--l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~ 320 (526)
T 4drs_A 243 DVQLCRQI--ISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVA 320 (526)
T ss_dssp HHHHHHHH--HHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHH
T ss_pred hHHHHHHH--HHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHc
Confidence 99999999 88776 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhh
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKS 258 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~ 258 (398)
|||||+||||||||++||+|||||++||||||+||+||||||||||.|+||+|||++|++||+++|+.++|...|+.+..
T Consensus 321 gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~ 400 (526)
T 4drs_A 321 GKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHS 400 (526)
T ss_dssp TCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888888776
Q ss_pred cCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCC
Q psy259 259 MLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPA 338 (398)
Q Consensus 259 ~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~ 338 (398)
..+.+.+..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++..
T Consensus 401 ~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~--- 477 (526)
T 4drs_A 401 SVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSI--- 477 (526)
T ss_dssp HSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCC---
T ss_pred ccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCC---
Confidence 66777889999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CcccCHHHHHHHHHHHHHHcCCCCCCCeEEEEeccCCC-CCCCcEEEEEEcC
Q psy259 339 DWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTVRIVYVS 389 (398)
Q Consensus 339 ~w~~d~d~~I~~ai~~ake~Glik~GD~VVVvsG~~~g-~G~tNtiRI~~v~ 389 (398)
.+.|+++..++++++++|++++||.||+++|++.| +|+||+|||++||
T Consensus 478 ---~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 478 ---HHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp ---CCHHHHHHHHHHHHHHTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred ---CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 78999999999999999999999999999999998 7999999999986
No 4
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.4e-101 Score=799.99 Aligned_cols=275 Identities=50% Similarity=0.772 Sum_probs=263.7
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
||.++|++ |++.|.+++||||||+++||+|+|||++++|||||||||||+|+|.|+||.+||+||++||++|||||+|
T Consensus 244 Dv~~~r~~--l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~A 321 (520)
T 3khd_A 244 DVRLIRNL--LGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITA 321 (520)
T ss_dssp HHHHHHHH--HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHH--HHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEe
Confidence 99999999 9988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCC
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPID 265 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 265 (398)
|||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+.++|...|..+....+.+.+
T Consensus 322 TQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 401 (520)
T 3khd_A 322 TQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPIS 401 (520)
T ss_dssp CCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCC
T ss_pred ehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998888777766544555668
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHH
Q psy259 266 SAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVD 345 (398)
Q Consensus 266 ~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d 345 (398)
..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|
T Consensus 402 ~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~------~~~d 475 (520)
T 3khd_A 402 VQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSF------QGTD 475 (520)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSC------CCHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCC------CCHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999764 7899
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeccCCC-CCCCcEEEEEEc
Q psy259 346 TRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTVRIVYV 388 (398)
Q Consensus 346 ~~I~~ai~~ake~Glik~GD~VVVvsG~~~g-~G~tNtiRI~~v 388 (398)
++++.+++.++++|++++||.||+++|++.| +|+||+|||+.|
T Consensus 476 ~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv~~v 519 (520)
T 3khd_A 476 IVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQI 519 (520)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEe
Confidence 9999999999999999999999999999988 899999999987
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=3e-99 Score=783.72 Aligned_cols=276 Identities=51% Similarity=0.782 Sum_probs=258.8
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
||.++|++ |++.|.+++||||||+++||+|+|||++++|||||||||||+|+|.|+||.+||+||++|+++|||||+|
T Consensus 235 Dv~~~r~~--l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~A 312 (511)
T 3gg8_A 235 DVRYIRGL--LGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITA 312 (511)
T ss_dssp HHHHHHHH--HTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH--HHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEe
Confidence 99999999 9988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCC
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPID 265 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 265 (398)
|||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+.++|...|+.+....+.+.+
T Consensus 313 TQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 392 (511)
T 3gg8_A 313 TQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPIS 392 (511)
T ss_dssp SSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCC
T ss_pred hHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988887777665544445668
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHH
Q psy259 266 SAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVD 345 (398)
Q Consensus 266 ~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d 345 (398)
..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|
T Consensus 393 ~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~------~~~d 466 (511)
T 3gg8_A 393 TQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSF------QGTD 466 (511)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--------CHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCC------CCHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999765 7899
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeccCCC-CCCCcEEEEEEcC
Q psy259 346 TRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTVRIVYVS 389 (398)
Q Consensus 346 ~~I~~ai~~ake~Glik~GD~VVVvsG~~~g-~G~tNtiRI~~v~ 389 (398)
+++.+++++++++|++++||.||+++|++.| +|+||+|||+.|+
T Consensus 467 ~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 467 HVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEEEEC------CCEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 9999999999999999999999999999988 8999999999874
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=9.3e-98 Score=786.66 Aligned_cols=276 Identities=43% Similarity=0.656 Sum_probs=263.7
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
||+++|++ |++.|.+++||||||+++|++|||||++++|||||||||||+|+|.|+||.+||+||++|+++|||||+|
T Consensus 220 Dv~~~r~~--l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~A 297 (606)
T 3t05_A 220 DVLEIREI--LEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITA 297 (606)
T ss_dssp HHHHHHHH--HHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH--HHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEe
Confidence 99999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCC
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPID 265 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 265 (398)
|||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+..+|...|...... .+.+
T Consensus 298 TQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~--~~~~ 375 (606)
T 3t05_A 298 TQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKL--VETS 375 (606)
T ss_dssp SSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH--SCCC
T ss_pred hHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccc--cCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998877777654331 2457
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHH
Q psy259 266 SAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVD 345 (398)
Q Consensus 266 ~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d 345 (398)
..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|
T Consensus 376 ~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~------~~~~ 449 (606)
T 3t05_A 376 LVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGR------KSTD 449 (606)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCC------SSHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCC------CCHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999765 7899
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeccCCC-CCCCcEEEEEEcCCc
Q psy259 346 TRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTVRIVYVSDN 391 (398)
Q Consensus 346 ~~I~~ai~~ake~Glik~GD~VVVvsG~~~g-~G~tNtiRI~~v~~~ 391 (398)
+++.+++++++++|++++||.||+++|++.+ +|+||+|||++|++.
T Consensus 450 ~~~~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~g~tN~~~v~~v~~v 496 (606)
T 3t05_A 450 ALLNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKIHLVGDE 496 (606)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEEECSSTTTCSSCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEeCccCCCCCCccceEEEEeccc
Confidence 9999999999999999999999999999988 899999999999743
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=2.7e-96 Score=757.50 Aligned_cols=271 Identities=42% Similarity=0.605 Sum_probs=237.0
Q ss_pred HHHHHHHHhhchhc-CCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 106 NVRLIEKLMATGEQ-GKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 106 dV~~ir~~~~l~~~-~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
||+++|++ |.+. |.+++||+|||+++|++|+|||++++|||||||||||+|+|.++|+.+||+|+.+|+++|||||+
T Consensus 199 Dv~~~~~~--l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ 276 (470)
T 1e0t_A 199 DVIEIREH--LKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT 276 (470)
T ss_dssp HHHHHHHH--HHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHH--HHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999 9888 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCC
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPI 264 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~ 264 (398)
||||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+.+++.+.|..... ..
T Consensus 277 ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~----~~ 352 (470)
T 1e0t_A 277 ATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNR----KL 352 (470)
T ss_dssp ECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCCCC------------
T ss_pred echhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc----cc
Confidence 99999999999999999999999999999999999999999999999999999999999997655444433211 23
Q ss_pred ChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCH
Q psy259 265 DSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDV 344 (398)
Q Consensus 265 ~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~ 344 (398)
+..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.
T Consensus 353 ~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~------~~~ 426 (470)
T 1e0t_A 353 RITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEI------TST 426 (470)
T ss_dssp -CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCC------CSH
T ss_pred chHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecCC------CCH
Confidence 56899999999999999999999999999999999999999999999999999999999999999998754 789
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEEeccCCCCCCCcEEEEEEc
Q psy259 345 DTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTVRIVYV 388 (398)
Q Consensus 345 d~~I~~ai~~ake~Glik~GD~VVVvsG~~~g~G~tNtiRI~~v 388 (398)
|++++.++++++++|++++||.||+++|++..+|+||+|||+.|
T Consensus 427 ~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 427 DDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL 470 (470)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCEEEEEECSSSCTTCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCCcCEEEEEeCCCCCCCccceEEEEEC
Confidence 99999999999999999999999999999933799999999875
No 8
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=5.7e-95 Score=752.93 Aligned_cols=354 Identities=47% Similarity=0.730 Sum_probs=317.8
Q ss_pred chhhhcccCCCCCCCcccccceeEEEeCCCCCCHHHHHHHHHhcccccc--cCCCC--------------------CC--
Q psy259 32 TFVDHLCGLDIDNKSSYVRLTGIICTIGPASVAVDMLEKIIETESNSDE--CSEKP--------------------RE-- 87 (398)
Q Consensus 32 t~l~h~~~L~i~~~~~~~r~t~Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~--------------------~p-- 87 (398)
|+|+|+|.|+++++ ...|+|+|||||||+|+++|+|++|+++||||-+ |||+. +|
T Consensus 2 ~~~~~~~~~~~~~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~ 80 (500)
T 1a3w_A 2 SRLERLTSLNVVAG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLA 80 (500)
T ss_dssp CHHHHHHCC------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCC
T ss_pred chhhhhhhcCcccc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceE
Confidence 68999999999886 5679999999999999999999999999999944 88863 22
Q ss_pred ------CC---------C-CC---------------CCCCCCCCcccHH-------------------------------
Q psy259 88 ------CP---------S-EP---------------EPPHCKEPNLYES------------------------------- 105 (398)
Q Consensus 88 ------gp---------~-~~---------------~~~k~~~~~~~vd------------------------------- 105 (398)
|| + ++ |...|+++.++|+
T Consensus 81 il~Dl~GPkiR~g~~~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~ 160 (500)
T 1a3w_A 81 IALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDD 160 (500)
T ss_dssp CEEECCCSCCBBCCCSSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC-
T ss_pred EEEeCCCCEEEEeecCCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEccC
Confidence 66 1 11 1234666656543
Q ss_pred -----------------------------------------------------------HHHHHHHHhhchhcCCcccEE
Q psy259 106 -----------------------------------------------------------NVRLIEKLMATGEQGKHIKII 126 (398)
Q Consensus 106 -----------------------------------------------------------dV~~ir~~~~l~~~~~~~~ii 126 (398)
||+++|++ +.+.|.+++||
T Consensus 161 ~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~--l~~~~~~i~Ii 238 (500)
T 1a3w_A 161 KTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREV--LGEQGKDVKII 238 (500)
T ss_dssp -CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHH--HHHHHTTSEEE
T ss_pred CeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH--HHhcCCCcEEE
Confidence 99999999 98888899999
Q ss_pred EeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 127 AKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 127 aKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
+|||+++|++|+|||++++|||||||||||+|+|.++|+.+||+|+.+|+++|||||+||||||||+.+|+|||||+|||
T Consensus 239 akIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdv 318 (500)
T 1a3w_A 239 VKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDV 318 (500)
T ss_dssp EEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHH
T ss_pred EEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEE
Q psy259 207 ANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAI 286 (398)
Q Consensus 207 anav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aI 286 (398)
+||++||+||||||+|||.|+||+|||++|++||+++|+.++|...|..+....+.+.+..+++|.+|+++|.+++|+||
T Consensus 319 a~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aI 398 (500)
T 1a3w_A 319 GNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAI 398 (500)
T ss_dssp HHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCE
T ss_pred HHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999987776666655321222346789999999999999999999
Q ss_pred EEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHHHHHHHHHHHHcCCCCCCCe
Q psy259 287 VVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDP 366 (398)
Q Consensus 287 Iv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~~ake~Glik~GD~ 366 (398)
|++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++....++|.++.|++++.++++++++|++++||.
T Consensus 399 v~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~ 478 (500)
T 1a3w_A 399 IVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDT 478 (500)
T ss_dssp EEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCE
T ss_pred EEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCE
Confidence 99999999999999999999999999999999999999999999998766678899999999999999999999999999
Q ss_pred EEEEeccCCCCCCCcEEEEEEc
Q psy259 367 VIVVTGWKKGAGFTNTVRIVYV 388 (398)
Q Consensus 367 VVVvsG~~~g~G~tNtiRI~~v 388 (398)
||+++|++.|.|+||+|||+.|
T Consensus 479 vvv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 479 YVSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp EEEEECCCTTTCCCCEEEEEEC
T ss_pred EEEEecccCCCCCCceEEEEEC
Confidence 9999999988999999999875
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=7.5e-94 Score=757.42 Aligned_cols=274 Identities=42% Similarity=0.628 Sum_probs=257.8
Q ss_pred HHHHHHHHhhchhcCC-cccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 106 NVRLIEKLMATGEQGK-HIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~-~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
|++++|++ +.+.|. +++||+|||+++|++|||||++++|||||||||||+|+|.|+||.+||+||++|+++|||||+
T Consensus 200 dv~~~~~~--l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ 277 (587)
T 2e28_A 200 DVLEIREL--LEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVIT 277 (587)
T ss_dssp HHHHHHHH--HHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHH--HHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 99999999 988885 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCC
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPI 264 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~ 264 (398)
||||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+.+++...|..... ..+.
T Consensus 278 ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~ 355 (587)
T 2e28_A 278 ATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTK--ESQT 355 (587)
T ss_dssp ESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT--TCCC
T ss_pred echhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc--cccc
Confidence 99999999999999999999999999999999999999999999999999999999999997665444554322 2224
Q ss_pred ChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCH
Q psy259 265 DSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDV 344 (398)
Q Consensus 265 ~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~ 344 (398)
+..+++|.+|+++|.+++|+|||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.
T Consensus 356 ~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~------~~~ 429 (587)
T 2e28_A 356 TITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHV------NTT 429 (587)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCCC------CSH
T ss_pred chHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEecccc------CCH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999754 789
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEEeccCCC-CCCCcEEEEEEcC
Q psy259 345 DTRVAHGIKYGRDRKFLNQGDPVIVVTGWKKG-AGFTNTVRIVYVS 389 (398)
Q Consensus 345 d~~I~~ai~~ake~Glik~GD~VVVvsG~~~g-~G~tNtiRI~~v~ 389 (398)
|++++.+++++++.||+++||.|++++|++.+ .|.||++|+..++
T Consensus 430 ~~~~~~a~~~~~~~G~~k~GD~VVItqG~P~g~~G~TN~LkI~~Vg 475 (587)
T 2e28_A 430 DEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKVHVIS 475 (587)
T ss_dssp HHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCCCCCEEEEEECS
T ss_pred HHHHHHHHHHHHhCCcccccceEEEecCcccCcCCCCceEEEEEEe
Confidence 99999999999999999999999999999877 7899999998875
No 10
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.1e-92 Score=726.38 Aligned_cols=251 Identities=32% Similarity=0.434 Sum_probs=238.6
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
||.++|++ |+++|.+++||||||+++||+|+|||++++|||||||||||+|+|.|+||.+||+||++|+++|||||+|
T Consensus 210 Dv~~~r~~--l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~A 287 (461)
T 3qtg_A 210 DVDSVRSL--LTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVA 287 (461)
T ss_dssp HHHHHHHH--HHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH--HHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999999 9999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCC
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPID 265 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~ 265 (398)
|||||||++||+|||||+|||||||+||+||||||||||.|+||+|||++|++||+++|+...+ | +.+.+
T Consensus 288 TQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~---~-------~~~~~ 357 (461)
T 3qtg_A 288 TQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQ---S-------PLLQN 357 (461)
T ss_dssp SSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCC---C-------CCCCS
T ss_pred ccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhh---c-------cCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999987543 1 34567
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHH
Q psy259 266 SAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVD 345 (398)
Q Consensus 266 ~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d 345 (398)
..+++|.+|+++|++++|+ ||++|.||+||+++|||||+|||||+|++++++|||+|+|||+|++++ . .+.|
T Consensus 358 ~~~aia~aa~~~a~~~~a~-Iv~~T~SG~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~------~~~d 429 (461)
T 3qtg_A 358 SRDRFAKGLVELAQDLGAN-ILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-A------ENYE 429 (461)
T ss_dssp HHHHHHHHHHHHHHHHTCE-EEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-C------SSHH
T ss_pred HHHHHHHHHHHHHHhcCCC-EEEECCCcHHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-C------CCHH
Confidence 8999999999999999999 999999999999999999999999999999999999999999999987 3 7899
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeccCCCCCCCcEEEEE
Q psy259 346 TRVAHGIKYGRDRKFLNQGDPVIVVTGWKKGAGFTNTVRIV 386 (398)
Q Consensus 346 ~~I~~ai~~ake~Glik~GD~VVVvsG~~~g~G~tNtiRI~ 386 (398)
++++.+++.++++| ||+++|.+ |+||+|||+
T Consensus 430 ~~~~~a~~~~~~~g-------vvit~g~p---~~TN~~~v~ 460 (461)
T 3qtg_A 430 EGLEKLISLKGTTP-------FVATYGIR---GGVHSVKVK 460 (461)
T ss_dssp HHHHHHHHHHCCSS-------EEEEECCT---TSCCEEEEE
T ss_pred HHHHHHHHHHHHCC-------EEEEeccC---CCCeEEEEE
Confidence 99999999999988 76777765 599999996
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.42 E-value=4.9e-14 Score=140.41 Aligned_cols=110 Identities=20% Similarity=0.273 Sum_probs=96.7
Q ss_pred cccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCC--------CCh---hhHHHHHHHHHHHHHHcCCCEEEeehh
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIE--------IPP---WKVFLAQKQMIAKCNKVGKPVICATQM 188 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e--------~~~---~~v~~~qk~ii~~c~~~gkpvi~ATQm 188 (398)
++.|+++||+++|++|+++|+++ +|+++||++||+.+ ++. +.|..++++++.+|+++|||++..+
T Consensus 177 ~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~-- 254 (339)
T 1izc_A 177 HVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA-- 254 (339)
T ss_dssp HCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC--
T ss_pred CceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec--
Confidence 47899999999999999999975 99999999999999 875 7899999999999999999998643
Q ss_pred hHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCC--CCChHHHHHHHHHHHHHHHhh
Q psy259 189 LESMIKKPRATRAEISDVANAVLDGADCVMLSGETAK--GDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 189 LeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~--G~yP~eaV~~m~~I~~~aE~~ 246 (398)
..| .|+.+++.+|+|+++++.++.. +.| .+.|+++++|+.++|..
T Consensus 255 -------~d~-----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 255 -------LSV-----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp -------SSG-----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred -------CCH-----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 222 6889999999999999998876 666 78899999999888864
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.19 E-value=2.1e-13 Score=131.35 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=75.3
Q ss_pred cccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh------hhHHHHHHHHHHHHHHcCCCEEEeehhhHHhh
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP------WKVFLAQKQMIAKCNKVGKPVICATQMLESMI 193 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi 193 (398)
++.|+++||+++|++|+|||+++ +|+++||++||+.+++. +.|..++++++.+|+++|||+++. .
T Consensus 145 ~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~-------~ 217 (267)
T 2vws_A 145 SLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL-------A 217 (267)
T ss_dssp HCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE-------C
T ss_pred ccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe-------c
Confidence 58899999999999999999988 99999999999999986 779999999999999999999872 1
Q ss_pred cCCCCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 194 KKPRATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 194 ~~~~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
. .| .+....+.+|++.+..+.+
T Consensus 218 ~--d~-----~~a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 218 V--AP-----DMAQQCLAWGANFVAVGVD 239 (267)
T ss_dssp S--SH-----HHHHHHHHTTCCEEEEEEH
T ss_pred C--CH-----HHHHHHHHCCCCEEEEchH
Confidence 2 22 2446778899999988754
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.11 E-value=1.6e-11 Score=119.64 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=75.2
Q ss_pred cccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh------hhHHHHHHHHHHHHHHcCCCEEEeehhhHHhh
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP------WKVFLAQKQMIAKCNKVGKPVICATQMLESMI 193 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi 193 (398)
++.|+++||+++|++|+|||+++ +|+++||++||+.+++. +.|..++++++.+|+++|||+++.
T Consensus 166 ~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~-------- 237 (287)
T 2v5j_A 166 QMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL-------- 237 (287)
T ss_dssp HCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE--------
T ss_pred CcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe--------
Confidence 58899999999999999999985 89999999999999985 779999999999999999999872
Q ss_pred cCCCCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 194 KKPRATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 194 ~~~~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
...|. +....+.+|++.+..+.+
T Consensus 238 -~~d~~-----~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 238 -IANEQ-----LAKRYLELGALFVAVGVD 260 (287)
T ss_dssp -CCCHH-----HHHHHHHTTCSEEEEEEH
T ss_pred -cCCHH-----HHHHHHHhCCCEEEECcH
Confidence 12332 446778899999988764
No 14
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.08 E-value=1e-10 Score=111.70 Aligned_cols=90 Identities=30% Similarity=0.392 Sum_probs=76.9
Q ss_pred CCcccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh------hhHHHHHHHHHHHHHHcCCCEEEeehhhHH
Q psy259 120 GKHIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP------WKVFLAQKQMIAKCNKVGKPVICATQMLES 191 (398)
Q Consensus 120 ~~~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~ATQmLeS 191 (398)
+.++.|+++||+++|+.|+|+|+++ +|+++||++||+.+++. +.+..++++++.+|+++|||+++.
T Consensus 143 ~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~------ 216 (256)
T 1dxe_A 143 NKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL------ 216 (256)
T ss_dssp TTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEE------
T ss_pred CcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEe------
Confidence 4578999999999999999999985 99999999999999985 679999999999999999999862
Q ss_pred hhcCCCCCchhhhhHHHHHHhCCcEEEecCcc
Q psy259 192 MIKKPRATRAEISDVANAVLDGADCVMLSGET 223 (398)
Q Consensus 192 Mi~~~~PtraEvsDVanav~dG~D~vmLS~ET 223 (398)
.. .| .+....+..|++.+..+.++
T Consensus 217 -~~--d~-----~~~~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 217 -AP--VE-----ADARRYLEWGATFVAVGSDL 240 (256)
T ss_dssp -CC--SH-----HHHHHHHHTTCCEEEEEEHH
T ss_pred -cC--CH-----HHHHHHHHcCCCEEEechHH
Confidence 11 22 25577889999999887653
No 15
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=98.96 E-value=4.7e-10 Score=107.75 Aligned_cols=92 Identities=24% Similarity=0.321 Sum_probs=77.8
Q ss_pred cCCcccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh------hhHHHHHHHHHHHHHHcCCCEEEeehhhH
Q psy259 119 QGKHIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP------WKVFLAQKQMIAKCNKVGKPVICATQMLE 190 (398)
Q Consensus 119 ~~~~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~ATQmLe 190 (398)
.+.++.++++||+++|+.|++||+++ .|+++||++||+.+++. +.+..++++++.+|+++|||+++.+
T Consensus 140 ~~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---- 215 (261)
T 3qz6_A 140 RNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---- 215 (261)
T ss_dssp HHTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE----
T ss_pred CCCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe----
Confidence 34578999999999999999999965 89999999999999975 5799999999999999999998742
Q ss_pred HhhcCCCCCchhhhhHHHHHHhCCcEEEecCcc
Q psy259 191 SMIKKPRATRAEISDVANAVLDGADCVMLSGET 223 (398)
Q Consensus 191 SMi~~~~PtraEvsDVanav~dG~D~vmLS~ET 223 (398)
..|..++ .-.+..|++.+.++.++
T Consensus 216 -----~~~~~~~----~~~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 216 -----AADAAKM----GWAVERGAQMLLWSGDV 239 (261)
T ss_dssp -----SSCGGGG----HHHHHTTCCEEEEEEHH
T ss_pred -----CCHHHHH----HHHHHCCCCEEEEhhHH
Confidence 2454442 45588999999998764
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=98.89 E-value=1.2e-09 Score=105.52 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHH--hcCeeEEcCCCCCCCCCh------hhHHHHHHHHHHHH
Q psy259 104 ESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIA--EADGIMVARGDLGIEIPP------WKVFLAQKQMIAKC 175 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~--~sDgimvaRgDLg~e~~~------~~v~~~qk~ii~~c 175 (398)
.+|+++++++ +...|.+++++++|||++|+.|+++|++ -+|++++|++||+.+++. +.+..++++++..|
T Consensus 105 ~~~v~~~~~~--l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa 182 (284)
T 1sgj_A 105 GAEARQVAQM--LQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAA 182 (284)
T ss_dssp HHHHHHHHHH--HHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHHTCCCCSSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHHhCCCCCCChHHHHHHHHHHHHHH
Confidence 3488888888 7665678999999999999999999997 389999999999999986 77999999999999
Q ss_pred HHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEe
Q psy259 176 NKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVML 219 (398)
Q Consensus 176 ~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmL 219 (398)
+++|||+|-. +.....-...=..++..+...|.|+-+.
T Consensus 183 ~a~G~~~i~~------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 183 RLTGVAALDI------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHHTCEEEEC------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHcCCCeeeC------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 9999999621 1100000000014567888999987555
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=98.46 E-value=2.8e-07 Score=91.16 Aligned_cols=103 Identities=20% Similarity=0.166 Sum_probs=81.7
Q ss_pred HHHHHHHHhhchh-------c----CCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCC-CCC-------------
Q psy259 106 NVRLIEKLMATGE-------Q----GKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGI-EIP------------- 160 (398)
Q Consensus 106 dV~~ir~~~~l~~-------~----~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~-e~~------------- 160 (398)
+++++|++ +.. . +.+++|+++||++.|+.|+|+|++++|++.||..||.. .++
T Consensus 149 E~~~a~~~--v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~ 226 (324)
T 2xz9_A 149 EVRKANSI--LEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQ 226 (324)
T ss_dssp HHHHHHHH--HHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHTTCCTTCGGGGGGCC
T ss_pred HHHHHHHH--HHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCcEEEECHHHHHHHHhCCCCCcccccccCC
Confidence 66667777 421 1 23689999999999999999999999999999999984 322
Q ss_pred --hhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 161 --PWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 161 --~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
.+.|..+.++++.+|+++|||+.++.+| ...| ..+...+..|.|.+..+.
T Consensus 227 ~~~p~v~~ai~~vv~aar~aG~~vgvcge~------~~dp-----~~~~~l~~lG~~~~si~p 278 (324)
T 2xz9_A 227 PFHPAILRLVKMVIDAAHKEGKFAAMCGEM------AGDP-----LAAVILLGLGLDEFSMSA 278 (324)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCH-----HHHHHHHHHTCCEEEECG
T ss_pred CCCHHHHHHHHHHHHHHHHHCCceeecCcc------CCCH-----HHHHHHHHCCCCEEEECh
Confidence 3778899999999999999999998774 1122 344677889999976653
No 18
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=98.07 E-value=4.9e-06 Score=91.15 Aligned_cols=106 Identities=19% Similarity=0.164 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhhchhcC----Cc-ccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCC-CC---------------hh
Q psy259 104 ESNVRLIEKLMATGEQG----KH-IKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIE-IP---------------PW 162 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~----~~-~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e-~~---------------~~ 162 (398)
+++++.++++ +...| .+ ++|+++||++.|+.|+|+|++++|++.||..||... ++ .+
T Consensus 652 ~~E~~~~~~~--l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~siGtnDLtq~tlg~~R~~~~~~~~~~~~~p 729 (794)
T 2ols_A 652 LGEAEAVVKA--LKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNP 729 (794)
T ss_dssp HHHHHHHHHH--HHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEEEHHHHHHHHHTCCTTCTTTGGGCCTTSH
T ss_pred HHHHHHHHHH--HHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCcchhccccCCCCH
Confidence 3366666666 55444 23 899999999999999999999999999999999876 55 36
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 163 KVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 163 ~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
.|..+.++++.+|+++|||+.++.|+--. .|. .+.-.+..|.|.+.+|.
T Consensus 730 ~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp~-----~~~~~~~~G~~~~s~~p 778 (794)
T 2ols_A 730 AVKVMLHLAISACRKQNKYVGICGQGPSD-----HPD-----FAKWLVEEGIESVSLNP 778 (794)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CHH-----HHHHHHHHTCCEEEECG
T ss_pred HHHHHHHHHHHHHHHhCCEEEEecccCCC-----CHH-----HHHHHHHCCCCEEEECH
Confidence 78899999999999999999998875320 121 14677889999999864
No 19
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=98.02 E-value=6e-06 Score=81.30 Aligned_cols=103 Identities=20% Similarity=0.346 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh---cCeeEEcCCCCCCCCCh----hhHHHHHHHHHHHHHH
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE---ADGIMVARGDLGIEIPP----WKVFLAQKQMIAKCNK 177 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~---sDgimvaRgDLg~e~~~----~~v~~~qk~ii~~c~~ 177 (398)
+|+..+.+. +...+.++.+++.|||++|+.|+++|+.. .|++++|..||..+++. +.+..+..+++..|++
T Consensus 142 ~~v~~~~~~--l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~Aara 219 (316)
T 3qll_A 142 AHLQILDRL--MMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAADIGAASTWEPLALARARLVSACAM 219 (316)
T ss_dssp HHHHHHHHH--TSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 377777777 76656678999999999999999999983 79999999999887764 5577778889999999
Q ss_pred cCCCEEEeehhhHHhhcCCCCCchh----hhhHHHHHHhCCcEEEe
Q psy259 178 VGKPVICATQMLESMIKKPRATRAE----ISDVANAVLDGADCVML 219 (398)
Q Consensus 178 ~gkpvi~ATQmLeSMi~~~~PtraE----vsDVanav~dG~D~vmL 219 (398)
+|+++|= .+.+.... ..++..+...|.++-+.
T Consensus 220 aGi~~id----------~v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 220 NGIPAID----------APFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HTCCEEE----------CCCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCceee----------ccccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 9999852 12222111 24677888889987555
No 20
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=97.93 E-value=2.9e-05 Score=82.15 Aligned_cols=89 Identities=20% Similarity=0.087 Sum_probs=74.5
Q ss_pred CcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCC----------CC------hhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIE----------IP------PWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e----------~~------~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.++.+.++||++.|+.++|+|++++|++.||..||..- ++ .+.|..+.++++.+|+++|||+++
T Consensus 424 ~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgi 503 (572)
T 2wqd_A 424 DDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGM 503 (572)
T ss_dssp SCCEEEEEECCHHHHHTHHHHHHHCSEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 36899999999999999999999999999999999821 11 367889999999999999999999
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
+.+|= ..|.-+ .-.+..|.|.+..|
T Consensus 504 CGe~a------gdp~~~-----~~l~~lG~~~~S~~ 528 (572)
T 2wqd_A 504 CGEMA------GDETAI-----PLLLGLGLDEFSMS 528 (572)
T ss_dssp CSGGG------GCTTTH-----HHHHHHTCCEEEEC
T ss_pred eCCcc------CCHHHH-----HHHHHCCCCEEEec
Confidence 87632 244443 67888999999876
No 21
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=97.82 E-value=3.3e-05 Score=81.75 Aligned_cols=90 Identities=19% Similarity=0.107 Sum_probs=75.6
Q ss_pred CcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCC----------CCC------hhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGI----------EIP------PWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~----------e~~------~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.++.+.++||++.|+.++|+|++.+|++.||..||.. .++ .+.|..+.++++.+|+++||||++
T Consensus 422 ~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgv 501 (575)
T 2hwg_A 422 ESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGM 501 (575)
T ss_dssp TTCEEEEEECSHHHHHTHHHHHTTCSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3689999999999999999999999999999999988 544 277889999999999999999998
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+.+ |- ..|. .+.-.+..|.|.+-.|.
T Consensus 502 CGe----~a--gdp~-----~~~~l~~lG~~~~S~~p 527 (575)
T 2hwg_A 502 CGE----LA--GDER-----ATLLLLGMGLDEFSMSA 527 (575)
T ss_dssp CST----TT--TCTT-----THHHHHHTTCCEEEECG
T ss_pred eCC----CC--CCHH-----HHHHHHHCCCCEEEECc
Confidence 766 22 2343 34677889999987764
No 22
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=97.78 E-value=2.4e-05 Score=75.27 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=68.5
Q ss_pred cccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh-----------hhHHHHHHHHHHHHHHcCCCEEEeehh
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP-----------WKVFLAQKQMIAKCNKVGKPVICATQM 188 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~-----------~~v~~~qk~ii~~c~~~gkpvi~ATQm 188 (398)
.+.+++.|||++|+.|++||+.. .||+++|+.||..+++. +.+..+..+++..|+++|++++-
T Consensus 104 ~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid---- 179 (273)
T 1u5h_A 104 PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIATLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALD---- 179 (273)
T ss_dssp TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHHHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE----
T ss_pred hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHHhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc----
Confidence 67899999999999999999865 78999999999887763 23667778899999999998852
Q ss_pred hHHhhcCCCCCchh----hhhHHHHHHhCCcEEEe
Q psy259 189 LESMIKKPRATRAE----ISDVANAVLDGADCVML 219 (398)
Q Consensus 189 LeSMi~~~~PtraE----vsDVanav~dG~D~vmL 219 (398)
.+.+.... ..++..+...|.|+-+.
T Consensus 180 ------~v~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 180 ------AVHLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp ------CCCSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred ------CCcCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 11111011 14678888999998777
No 23
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=97.77 E-value=3.3e-05 Score=76.44 Aligned_cols=102 Identities=18% Similarity=0.089 Sum_probs=74.6
Q ss_pred HHHHHHHHhhchh----cC--CcccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh---------------h
Q psy259 106 NVRLIEKLMATGE----QG--KHIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP---------------W 162 (398)
Q Consensus 106 dV~~ir~~~~l~~----~~--~~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~---------------~ 162 (398)
||+.+.++ +.. .| ..+.+++.|||++|+.|+++|++. .|++++|..||..+++. +
T Consensus 125 dv~~~~~~--l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~g~~~~p 202 (332)
T 3qqw_A 125 QVAEVIRY--IGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDFGLMDFVSGHHGAIPAAAMRSPGQFEHA 202 (332)
T ss_dssp HHHHHHHH--HHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEECHHHHHHTTTTCSCGGGGSTTGGGTSH
T ss_pred HHHHHHHH--HHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEEcHHHHHHHhCCCccccccCCCCcccCH
Confidence 66666666 432 12 468999999999999999999954 79999999999777653 2
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCch--h--hhhHHHHH-HhCCcEEEe
Q psy259 163 KVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRA--E--ISDVANAV-LDGADCVML 219 (398)
Q Consensus 163 ~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptra--E--vsDVanav-~dG~D~vmL 219 (398)
.+..+..+++..|+.+|+++|= .+.+... | -.+...+. ..|.|+-+.
T Consensus 203 ~l~~ar~~vv~AAraaGi~~id----------~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 254 (332)
T 3qqw_A 203 LLVRAKADMVAAALANGIVPAH----------NVCLNLKDAEVIASDACRARNEFGFLRMWS 254 (332)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEE----------CCCSCSSCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCccc----------CCcccccCHHHHHHHHHHHHHhCCCCcccc
Confidence 3667788999999999999852 2222111 1 14567777 789998665
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=97.73 E-value=4.4e-05 Score=75.82 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=72.9
Q ss_pred HHHHHHHHHhhchh----cC--CcccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCCh---------------
Q psy259 105 SNVRLIEKLMATGE----QG--KHIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPP--------------- 161 (398)
Q Consensus 105 ddV~~ir~~~~l~~----~~--~~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~--------------- 161 (398)
+||..+.++ +.. .| ..+.+++.|||++|+.|+++|++. .|++++|..||..+++.
T Consensus 123 ~dv~~~~~~--l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~~~~~~ 200 (339)
T 3r4i_A 123 HDAAEMVAF--IEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGLMDFVSAHDGAIPDTAMRSPGQFDH 200 (339)
T ss_dssp HHHHHHHHH--HHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECHHHHHHTTTTSSCGGGGSTTHHHHS
T ss_pred HHHHHHHHH--HHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECHHHHHHHhCCCcCccccCCCccccC
Confidence 366666666 432 12 368999999999999999999954 79999999999877652
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCch--h--hhhHHHHH-HhCCcEEEe
Q psy259 162 WKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRA--E--ISDVANAV-LDGADCVML 219 (398)
Q Consensus 162 ~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptra--E--vsDVanav-~dG~D~vmL 219 (398)
+.+..+..+++..|+.+|+++|= .+.+.-. | -.+...+. ..|.|+-+.
T Consensus 201 p~~~~a~~~iv~AAraaGi~~id----------~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 253 (339)
T 3r4i_A 201 PLVRRAKLEISAACHAYGKVPSH----------NVSTEVRDMSVVANDAARARNEFGYTRMWS 253 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEE----------CCCCCSSCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCcc----------CCCcCCCChHHHHHHHHHHHHhCCCCccee
Confidence 12566778999999999999852 1222111 1 12455665 689997555
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=96.98 E-value=0.00072 Score=69.09 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=68.0
Q ss_pred cccEEEeecChHH---HhcHHHHHHh-------cCeeEEcCCCCCCCCCh-------hhHHHHHHHHHHHHHHcCCCEEE
Q psy259 122 HIKIIAKIENHQG---VKNLDEIIAE-------ADGIMVARGDLGIEIPP-------WKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 122 ~~~iiaKIE~~~~---v~n~deIl~~-------sDgimvaRgDLg~e~~~-------~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++.|||++| +.|+++|+.+ .+|+++|+.||..+++. +.+..+-.+++..|+.+|+++|=
T Consensus 150 ~i~lialIETa~g~~~L~na~eIAaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aID 229 (433)
T 3oyz_A 150 SLAMSVIIESGEAELAMGDLRDEMGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVD 229 (433)
T ss_dssp CSEEEEEECSHHHHHHGGGHHHHHHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEEEeChhHHHHHHHHHHHHhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccc
Confidence 6899999999999 9999999986 47999999999877764 23556677889999999998752
Q ss_pred eehhhHHhhcCCCCCc--hh--hhhHHHHHHhCCcEEEe
Q psy259 185 ATQMLESMIKKPRATR--AE--ISDVANAVLDGADCVML 219 (398)
Q Consensus 185 ATQmLeSMi~~~~Ptr--aE--vsDVanav~dG~D~vmL 219 (398)
.+.+.. .| ..++..+...|.|+-+.
T Consensus 230 ----------gV~~di~D~egL~~ea~~ar~lGF~GK~~ 258 (433)
T 3oyz_A 230 ----------GPYDDIRDVEGYRERMTDNQAKGMLGIWS 258 (433)
T ss_dssp ----------CCCCCTTCHHHHHHHHHHHHTTTCCEEEE
T ss_pred ----------ccccCCCCHHHHHHHHHHHHhCCCCceEe
Confidence 122211 11 14678888999998776
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=96.66 E-value=0.0011 Score=73.34 Aligned_cols=89 Identities=20% Similarity=0.038 Sum_probs=72.3
Q ss_pred cccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCC-CCCCh----------------------------hhHHHHHHHHH
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLG-IEIPP----------------------------WKVFLAQKQMI 172 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg-~e~~~----------------------------~~v~~~qk~ii 172 (398)
+++|.++||++.|+.+.|+|++.+|++.||-.||. ..++. +.|-...++++
T Consensus 742 ~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~ 821 (876)
T 1vbg_A 742 GYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFAT 821 (876)
T ss_dssp CCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHH
T ss_pred CcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHH
Confidence 58899999999999999999999999999999987 22221 46778889999
Q ss_pred HHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 173 AKCNKV--GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 173 ~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
++|+++ ||||.++-||= ..|.-+ .-.+..|.|-+-.|.
T Consensus 822 ~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l~~~Gl~~vS~sp 861 (876)
T 1vbg_A 822 ERGRKARPNLKVGICGEHG------GEPSSV-----AFFAKAGLDYVSCSP 861 (876)
T ss_dssp HHHHHHSTTCEEEEESGGG------GSHHHH-----HHHHHTTCSEEEECG
T ss_pred HHHHHhCCCCEEEEcCCcC------CCHHHH-----HHHHHcCCCEEEECc
Confidence 999998 99999987742 134433 556888999998874
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=96.15 E-value=0.0031 Score=69.72 Aligned_cols=105 Identities=16% Similarity=0.095 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhhchh--------cC--CcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCC-CCCCh-----------
Q psy259 104 ESNVRLIEKLMATGE--------QG--KHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLG-IEIPP----------- 161 (398)
Q Consensus 104 vddV~~ir~~~~l~~--------~~--~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg-~e~~~----------- 161 (398)
+++++.++++ +.+ .| .+++|.++||++.|+.+.|+|++.+|++.||-.||. ..++.
T Consensus 710 ~~E~~~~~~~--i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~ 787 (873)
T 1kbl_A 710 KKELKFVKDV--VVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDS 787 (873)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHH
Confidence 4466666655 321 24 358899999999999999999999999999999998 33221
Q ss_pred -----------------hhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 162 -----------------WKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 162 -----------------~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+-|-...++.+++|+++ |+||.++-||= ..|.-+ .-.+..|.|-+-.|.
T Consensus 788 ~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l~~~Gl~~vS~sp 855 (873)
T 1kbl_A 788 YYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG------GDPSSV-----EFCHKVGLNYVSCSP 855 (873)
T ss_dssp HHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG------GSHHHH-----HHHHHTTCSEEEECG
T ss_pred HHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCC------CCHHHH-----HHHHHcCCCEEEECh
Confidence 45777888999999997 99999987742 134333 456788999998874
No 28
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=95.44 E-value=0.11 Score=47.91 Aligned_cols=48 Identities=25% Similarity=0.241 Sum_probs=41.6
Q ss_pred ChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeC
Q psy259 265 DSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 265 ~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~ 313 (398)
..++.....|++.|.+++.+-|||.|.||.||..+...-.. -+++||.
T Consensus 34 eNT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh 81 (206)
T 1t57_A 34 ENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTH 81 (206)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeC
Confidence 35677778888999999999999999999999999886655 8999994
No 29
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=95.27 E-value=0.1 Score=47.95 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=43.3
Q ss_pred ChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeC
Q psy259 265 DSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 265 ~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~ 313 (398)
..++.....|++.|.+++.+-|||.|.||.||..+...-...-+++||.
T Consensus 26 eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh 74 (201)
T 1vp8_A 26 ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTY 74 (201)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeC
Confidence 3567777888899999999999999999999999998777789999994
No 30
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.22 E-value=0.14 Score=53.74 Aligned_cols=131 Identities=22% Similarity=0.273 Sum_probs=85.3
Q ss_pred eEEEeCCCCCCHHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-eec
Q psy259 54 IICTIGPASVAVDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-KIE 130 (398)
Q Consensus 54 Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-KIE 130 (398)
+=+.||-.-...|..+.|+++|.++-- -+|+ .....++-++.+|+. ..++.||+ -+-
T Consensus 272 VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahG--------------hs~~v~~~i~~ik~~------~p~~~viaGNVa 331 (556)
T 4af0_A 272 CGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQG--------------NSVYQIEFIKWIKQT------YPKIDVIAGNVV 331 (556)
T ss_dssp CEEEECSSHHHHHHHHHHHHTTCCEEEECCSCC--------------CSHHHHHHHHHHHHH------CTTSEEEEEEEC
T ss_pred eEEEeccCccHHHHHHHHHhcCCcEEEEecccc--------------ccHHHHHHHHHHHhh------CCcceEEecccc
Confidence 334566555678889999999966521 2222 011113344555554 34677777 899
Q ss_pred ChHHHhcHHHHHHhcCeeEEcCCC---------CCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCch
Q psy259 131 NHQGVKNLDEIIAEADGIMVARGD---------LGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRA 201 (398)
Q Consensus 131 ~~~~v~n~deIl~~sDgimvaRgD---------Lg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptra 201 (398)
+.++..++-+ +=+|+|-|+-|- .|+-.|. .-+.....+.|++.|+|||- .-..-+
T Consensus 332 T~e~a~~Li~--aGAD~vkVGiGpGSiCtTr~v~GvG~PQ---~tAi~~~a~~a~~~~vpvIA---------DGGI~~-- 395 (556)
T 4af0_A 332 TREQAAQLIA--AGADGLRIGMGSGSICITQEVMAVGRPQ---GTAVYAVAEFASRFGIPCIA---------DGGIGN-- 395 (556)
T ss_dssp SHHHHHHHHH--HTCSEEEECSSCSTTBCCTTTCCSCCCH---HHHHHHHHHHHGGGTCCEEE---------ESCCCS--
T ss_pred CHHHHHHHHH--cCCCEEeecCCCCcccccccccCCCCcH---HHHHHHHHHHHHHcCCCEEe---------cCCcCc--
Confidence 9999876633 349999998774 2333332 22445566778889999985 322222
Q ss_pred hhhhHHHHHHhCCcEEEecC
Q psy259 202 EISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 202 EvsDVanav~dG~D~vmLS~ 221 (398)
..||+.|+..|||+|||.+
T Consensus 396 -sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 396 -IGHIAKALALGASAVMMGG 414 (556)
T ss_dssp -HHHHHHHHHTTCSEEEEST
T ss_pred -chHHHHHhhcCCCEEEEch
Confidence 4799999999999999954
No 31
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.55 E-value=2.7 Score=43.36 Aligned_cols=131 Identities=20% Similarity=0.270 Sum_probs=84.1
Q ss_pred eEEEeCCCCCCHHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-eec
Q psy259 54 IICTIGPASVAVDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-KIE 130 (398)
Q Consensus 54 Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-KIE 130 (398)
+...+|......+.+++++++|.++-. .+++ ..-.+++.|.++|+. . .++.|++ -+-
T Consensus 222 v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g--------------~~~~~~~~i~~ir~~--~----p~~~Vi~g~v~ 281 (496)
T 4fxs_A 222 VGAAVGAAPGNEERVKALVEAGVDVLLIDSSHG--------------HSEGVLQRIRETRAA--Y----PHLEIIGGNVA 281 (496)
T ss_dssp CEEECCSSSCCHHHHHHHHHTTCSEEEEECSCT--------------TSHHHHHHHHHHHHH--C----TTCCEEEEEEC
T ss_pred eeeeeccccchHHHHHHHHhccCceEEeccccc--------------cchHHHHHHHHHHHH--C----CCceEEEcccC
Confidence 445678888899999999999966533 2221 122345566777776 4 2466666 477
Q ss_pred ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCC-------hhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchh
Q psy259 131 NHQGVKNLDEIIAE-ADGIMVARGDLGIEIP-------PWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAE 202 (398)
Q Consensus 131 ~~~~v~n~deIl~~-sDgimvaRgDLg~e~~-------~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraE 202 (398)
+.+.... .++. +|+|.|+=|.=+.... .+ -..+-.++.+.|++.++|||.+.- .-+
T Consensus 282 t~e~a~~---l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GG---------I~~--- 345 (496)
T 4fxs_A 282 TAEGARA---LIEAGVSAVKVGIGPGSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGG---------IRF--- 345 (496)
T ss_dssp SHHHHHH---HHHHTCSEEEECSSCCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESC---------CCS---
T ss_pred cHHHHHH---HHHhCCCEEEECCCCCcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCC---------CCC---
Confidence 7766543 3444 8999986443222111 11 123445677777788999997422 222
Q ss_pred hhhHHHHHHhCCcEEEec
Q psy259 203 ISDVANAVLDGADCVMLS 220 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS 220 (398)
..|++.|+..|||+||+.
T Consensus 346 ~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 346 SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCeEEec
Confidence 368999999999999995
No 32
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=92.29 E-value=0.21 Score=52.28 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=66.5
Q ss_pred CcccEEEeecChHHHhcHHHHHHh----cCeeEEcCCCCCCCCCh--------------------hhHHHHHHHHHHHHH
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE----ADGIMVARGDLGIEIPP--------------------WKVFLAQKQMIAKCN 176 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~----sDgimvaRgDLg~e~~~--------------------~~v~~~qk~ii~~c~ 176 (398)
..+++.+.||+..|+-|++||+.. +.|+..||.|+..++.. +-+...++.++..|+
T Consensus 237 gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~ 316 (528)
T 3cux_A 237 GTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCH 316 (528)
T ss_dssp TCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHH
Confidence 369999999999999999999966 45999999988655421 235566777889999
Q ss_pred HcCCCEEEeehhhHHhhcCCCCCc----------hh-hhhHHHHHHhCCcEEEec
Q psy259 177 KVGKPVICATQMLESMIKKPRATR----------AE-ISDVANAVLDGADCVMLS 220 (398)
Q Consensus 177 ~~gkpvi~ATQmLeSMi~~~~Ptr----------aE-vsDVanav~dG~D~vmLS 220 (398)
++|++.|= -|-- -.|.+ +. ..|-..+..+|+|+-+.-
T Consensus 317 a~G~~aIg------Gm~a-~ip~~~D~~~n~~~~~~~~~dk~~~~~~GfdGkwvi 364 (528)
T 3cux_A 317 RRNAPAIG------GMAA-QIPIKNNPEANEAAFEKVRADKEREALDGHDGTWVA 364 (528)
T ss_dssp HTTCCEEC--------------------------CHHHHHHHHHHHHTCSBEEES
T ss_pred HcCCCCcc------cccc-cCcCcCChHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 99998764 2211 12322 11 256788899999999884
No 33
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=91.91 E-value=0.12 Score=54.03 Aligned_cols=95 Identities=20% Similarity=0.193 Sum_probs=65.8
Q ss_pred CcccEEEeecChHHHhcHHHHHHh----cCeeEEcCCCCCCCCC--------------------hhhHHHHHHHHHHHHH
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE----ADGIMVARGDLGIEIP--------------------PWKVFLAQKQMIAKCN 176 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~----sDgimvaRgDLg~e~~--------------------~~~v~~~qk~ii~~c~ 176 (398)
..+++.+.|||..|+.|++||+.+ +.|+..||.|+..++- .+-+...++.++..|+
T Consensus 240 gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~ 319 (532)
T 3cuz_A 240 GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCH 319 (532)
T ss_dssp TCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHH
Confidence 468999999999999999999976 4689999999876551 0124455556669999
Q ss_pred HcCCCEEE--eehhhHHhhcCCCCCc-----h-hhhhHHHHHHhCCcEEEec
Q psy259 177 KVGKPVIC--ATQMLESMIKKPRATR-----A-EISDVANAVLDGADCVMLS 220 (398)
Q Consensus 177 ~~gkpvi~--ATQmLeSMi~~~~Ptr-----a-EvsDVanav~dG~D~vmLS 220 (398)
++|++.|= +- ++. -..|.. + =..|...+..+|+|+-+.-
T Consensus 320 a~G~~aIdGm~a-~~p----~kD~e~~~~~~~~l~~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 320 KRGAFAMGGMAA-FIP----SKDEEHNNQVLNKVKADKSLEANNGHDGTWIA 366 (532)
T ss_dssp HTTCEEEEEEEC-BCC----CSSGGGCHHHHHHHHHHHHHHHHHTCSEEEES
T ss_pred HcCCCCccCccc-cCC----CCChhHHHHHHHHHHHHHHHHHHCCCCccccC
Confidence 99998764 21 110 001111 0 1257788899999998883
No 34
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=88.79 E-value=3.3 Score=42.82 Aligned_cols=133 Identities=19% Similarity=0.222 Sum_probs=81.2
Q ss_pred eeEEEeCCCCCCHHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-ee
Q psy259 53 GIICTIGPASVAVDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-KI 129 (398)
Q Consensus 53 ~Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-KI 129 (398)
.+-..+|+.-...+.++.|+++|.++-. ..++ ...-+++.|.++|+. . .++.|++ -+
T Consensus 246 ~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g--------------~~~~v~~~i~~i~~~--~----~~~~vi~g~v 305 (511)
T 3usb_A 246 LVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG--------------HSQGVIDKVKEVRAK--Y----PSLNIIAGNV 305 (511)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT--------------TSHHHHHHHHHHHHH--C----TTSEEEEEEE
T ss_pred eeeeeeeeccchHHHHHHHHhhccceEEeccccc--------------chhhhhhHHHHHHHh--C----CCceEEeeee
Confidence 3445677777778899999999965533 1111 112234566677766 4 2455665 56
Q ss_pred cChHHHhcHHHHHHh-cCeeEEcCCCCCCC-------CChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCch
Q psy259 130 ENHQGVKNLDEIIAE-ADGIMVARGDLGIE-------IPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRA 201 (398)
Q Consensus 130 E~~~~v~n~deIl~~-sDgimvaRgDLg~e-------~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptra 201 (398)
-+.+.... ..+. +|+|.|+-|-=++. ++.+.+ .+-..+.+.|++.+.|||.+-- .-
T Consensus 306 ~t~e~a~~---~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GG---------I~--- 369 (511)
T 3usb_A 306 ATAEATKA---LIEAGANVVKVGIGPGSICTTRVVAGVGVPQL-TAVYDCATEARKHGIPVIADGG---------IK--- 369 (511)
T ss_dssp CSHHHHHH---HHHHTCSEEEECSSCSTTCCHHHHHCCCCCHH-HHHHHHHHHHHTTTCCEEEESC---------CC---
T ss_pred ccHHHHHH---HHHhCCCEEEECCCCccccccccccCCCCCcH-HHHHHHHHHHHhCCCcEEEeCC---------CC---
Confidence 66655433 3334 89999865431111 111222 3445666778888999997422 22
Q ss_pred hhhhHHHHHHhCCcEEEecC
Q psy259 202 EISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 202 EvsDVanav~dG~D~vmLS~ 221 (398)
-..|++.|+..|||+||+..
T Consensus 370 ~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 370 YSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp SHHHHHHHHHTTCSEEEEST
T ss_pred CHHHHHHHHHhCchhheecH
Confidence 24699999999999999953
No 35
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=88.29 E-value=0.43 Score=51.44 Aligned_cols=93 Identities=17% Similarity=0.079 Sum_probs=66.9
Q ss_pred CcccEEEeecChHHHhcHHHHHHh----cCeeEEcCCCCCCCC-Ch----------------hhHHHHHHHHHH---HHH
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE----ADGIMVARGDLGIEI-PP----------------WKVFLAQKQMIA---KCN 176 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~----sDgimvaRgDLg~e~-~~----------------~~v~~~qk~ii~---~c~ 176 (398)
..+++.+.||+..|+-|++||+.. +-|+..|+.|+.-++ .. +-+...++..+. .|+
T Consensus 418 gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcr 497 (731)
T 1p7t_A 418 NTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCG 497 (731)
T ss_dssp TCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEEEECCHHHHHhHHHHHHhhccceEEEEcCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHH
Confidence 479999999999999999999853 469999999887664 11 223445677776 899
Q ss_pred HcCCCEEEeehhhHHhhcCCCCCchh--hhhHHHHHHhCCcEEEec
Q psy259 177 KVGKPVICATQMLESMIKKPRATRAE--ISDVANAVLDGADCVMLS 220 (398)
Q Consensus 177 ~~gkpvi~ATQmLeSMi~~~~PtraE--vsDVanav~dG~D~vmLS 220 (398)
.+|++.|=- .|-.. |..-| ..|......+|+|+-++-
T Consensus 498 aaG~~aIgk-----Gm~a~--p~dmeg~~~dk~~~~~~GfdGkwVi 536 (731)
T 1p7t_A 498 LRGKAQIGK-----GMWAM--PDLMADMYSQKGDQLRAGANTAWVP 536 (731)
T ss_dssp CTTTSEEEE-----CCCCC--TTCHHHHHHHTHHHHHTTCSEEEES
T ss_pred HcCCCCccc-----ccccC--hhhHHHHHHHHHHHHhCCCCCcccC
Confidence 999987740 12222 32222 256778889999999984
No 36
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=87.68 E-value=5.9 Score=40.64 Aligned_cols=132 Identities=18% Similarity=0.252 Sum_probs=82.5
Q ss_pred eEEEeCCCCCCHHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe-ec
Q psy259 54 IICTIGPASVAVDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK-IE 130 (398)
Q Consensus 54 Iictigp~~~~~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE 130 (398)
+-..+|......+.+++++++|.++-. .+++ ....+.+.|+++|+. . .++.|++. +-
T Consensus 220 v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g--------------~~~~~~~~v~~i~~~--~----p~~~Vi~g~v~ 279 (490)
T 4avf_A 220 VGAAVGTGADTGERVAALVAAGVDVVVVDTAHG--------------HSKGVIERVRWVKQT--F----PDVQVIGGNIA 279 (490)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEEECSCC--------------SBHHHHHHHHHHHHH--C----TTSEEEEEEEC
T ss_pred eeeeeccccchHHHHHHHhhcccceEEecccCC--------------cchhHHHHHHHHHHH--C----CCceEEEeeeC
Confidence 444677777889999999999966533 2221 122334566777776 4 24677775 66
Q ss_pred ChHHHhcHHHHHHh-cCeeEEcCCCCCCC-------CChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchh
Q psy259 131 NHQGVKNLDEIIAE-ADGIMVARGDLGIE-------IPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAE 202 (398)
Q Consensus 131 ~~~~v~n~deIl~~-sDgimvaRgDLg~e-------~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraE 202 (398)
+.+... ...+. +|+|.|+-|.=+.. ++.+. ..+-+++.+.|++.+.|||.+.- .-+
T Consensus 280 t~e~a~---~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GG---------I~~--- 343 (490)
T 4avf_A 280 TAEAAK---ALAEAGADAVKVGIGPGSICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIADGG---------IRF--- 343 (490)
T ss_dssp SHHHHH---HHHHTTCSEEEECSSCSTTCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEESC---------CCS---
T ss_pred cHHHHH---HHHHcCCCEEEECCCCCcCCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEeCC---------CCC---
Confidence 666543 34444 89999964321111 11122 23445666667677999997422 222
Q ss_pred hhhHHHHHHhCCcEEEecC
Q psy259 203 ISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS~ 221 (398)
..|++.|+..|||+||+..
T Consensus 344 ~~di~kal~~GAd~V~vGs 362 (490)
T 4avf_A 344 SGDLAKAMVAGAYCVMMGS 362 (490)
T ss_dssp HHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHcCCCeeeecH
Confidence 3689999999999999953
No 37
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=85.87 E-value=1.4 Score=48.92 Aligned_cols=89 Identities=17% Similarity=0.040 Sum_probs=71.4
Q ss_pred cccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCC-----C-------C------------Ch-----hhHHHHHHHHH
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGI-----E-------I------------PP-----WKVFLAQKQMI 172 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~-----e-------~------------~~-----~~v~~~qk~ii 172 (398)
+++|-.+||.|.+.-..|+|++.+|++=||-.||.- + + |. +-|-...++.+
T Consensus 762 ~~~vG~MiEvPsaal~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai 841 (913)
T 1h6z_A 762 HYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAV 841 (913)
T ss_dssp CCEEEEEECSHHHHHTHHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHH
T ss_pred CceEEEEecchHHHHHHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHH
Confidence 588999999999999999999999999999888742 1 0 11 46778888999
Q ss_pred HHHHH--cCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 173 AKCNK--VGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 173 ~~c~~--~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
++|++ .|+||.++-||=- .|.-+ .-.+..|.|-+-.|.
T Consensus 842 ~~a~~~~~g~~vgICGE~~g------dP~~~-----~~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 842 TKGRRVKPMLKMGICGEHGG------DPATI-----GFCHKVGLDYVSCSP 881 (913)
T ss_dssp HHHHHHSTTCEEEECSGGGG------CHHHH-----HHHHHHTCSEEEECG
T ss_pred HHHHhcCCCCEEEEcCCCCC------CHHHH-----HHHHHcCCCEEEECc
Confidence 99997 6999999888631 34444 556778999999984
No 38
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=85.84 E-value=5.3 Score=40.23 Aligned_cols=125 Identities=20% Similarity=0.282 Sum_probs=71.8
Q ss_pred EeCCCCCCHHHHHHHHHhccccccc--CCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-eecChH
Q psy259 57 TIGPASVAVDMLEKIIETESNSDEC--SEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-KIENHQ 133 (398)
Q Consensus 57 tigp~~~~~e~l~~~i~~Gmnvr~~--~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-KIE~~~ 133 (398)
.+|+. +.|.++.++++|.++-.+ +++ ..--+.+.|+++|+. + +++||+ .+-+.+
T Consensus 140 ~v~~~--~~e~~~~lveaGvdvIvldta~G--------------~~~~~~e~I~~ik~~--~-----~i~Vi~g~V~t~e 196 (400)
T 3ffs_A 140 AIGVN--EIERAKLLVEAGVDVIVLDSAHG--------------HSLNIIRTLKEIKSK--M-----NIDVIVGNVVTEE 196 (400)
T ss_dssp EECCC---CHHHHHHHHHTCSEEEECCSCC--------------SBHHHHHHHHHHHTT--C-----CCEEEEEEECSHH
T ss_pred ecCCC--HHHHHHHHHHcCCCEEEEeCCCC--------------CcccHHHHHHHHHhc--C-----CCeEEEeecCCHH
Confidence 45553 389999999999665432 222 111223444555554 2 467776 565554
Q ss_pred HHhcHHHHHHh-cCeeEEcC--CCCCC-----CCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhh
Q psy259 134 GVKNLDEIIAE-ADGIMVAR--GDLGI-----EIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISD 205 (398)
Q Consensus 134 ~v~n~deIl~~-sDgimvaR--gDLg~-----e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsD 205 (398)
.. ...++. +|+|.++- |..+. ..+.+. ..+-+++.+.|++.+.|||.+-- .-+ ..|
T Consensus 197 ~A---~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GG---------I~~---~~d 260 (400)
T 3ffs_A 197 AT---KELIENGADGIKVGIGPGSICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGG---------IRY---SGD 260 (400)
T ss_dssp HH---HHHHHTTCSEEEECC---------CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESC---------CCS---HHH
T ss_pred HH---HHHHHcCCCEEEEeCCCCcCcccccccccchhH-HHHHHHHHHHHHhcCCCEEecCC---------CCC---HHH
Confidence 44 334445 89999953 21110 011111 23445566666667999997422 222 469
Q ss_pred HHHHHHhCCcEEEec
Q psy259 206 VANAVLDGADCVMLS 220 (398)
Q Consensus 206 Vanav~dG~D~vmLS 220 (398)
++.|+..|||+||+.
T Consensus 261 i~kalalGAd~V~vG 275 (400)
T 3ffs_A 261 IGKALAVGASSVMIG 275 (400)
T ss_dssp HHHHHTTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEC
Confidence 999999999999984
No 39
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=84.91 E-value=12 Score=38.17 Aligned_cols=128 Identities=20% Similarity=0.250 Sum_probs=79.9
Q ss_pred EEeCCCCCCHHHHHHHHHhccccccc--CCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe-ecCh
Q psy259 56 CTIGPASVAVDMLEKIIETESNSDEC--SEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK-IENH 132 (398)
Q Consensus 56 ctigp~~~~~e~l~~~i~~Gmnvr~~--~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~~ 132 (398)
..+|......+.++.++++|..+-.+ +++ ..-.+.+.|+++|+. + .++.|++| +.+.
T Consensus 248 a~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G--------------~~~~~~~~i~~i~~~--~----~~~pvi~~~v~t~ 307 (514)
T 1jcn_A 248 AAVGTREDDKYRLDLLTQAGVDVIVLDSSQG--------------NSVYQIAMVHYIKQK--Y----PHLQVIGGNVVTA 307 (514)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEECCSCC--------------CSHHHHHHHHHHHHH--C----TTCEEEEEEECSH
T ss_pred eEecCchhhHHHHHHHHHcCCCEEEeeccCC--------------cchhHHHHHHHHHHh--C----CCCceEecccchH
Confidence 34666666788999999999665442 322 112344667777777 5 25778875 7776
Q ss_pred HHHhcHHHHHHh-cCeeEEcC--CCC-------CCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchh
Q psy259 133 QGVKNLDEIIAE-ADGIMVAR--GDL-------GIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAE 202 (398)
Q Consensus 133 ~~v~n~deIl~~-sDgimvaR--gDL-------g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraE 202 (398)
+....+. +. +|+|.|+. |-- +...|. +.....+-+.++..+.|||.+-- .- .
T Consensus 308 ~~a~~l~---~aGad~I~vg~~~G~~~~t~~~~~~g~~~---~~~~~~~~~~~~~~~ipVia~GG---------I~---~ 369 (514)
T 1jcn_A 308 AQAKNLI---DAGVDGLRVGMGCGSICITQEVMACGRPQ---GTAVYKVAEYARRFGVPIIADGG---------IQ---T 369 (514)
T ss_dssp HHHHHHH---HHTCSEEEECSSCSCCBTTBCCCSCCCCH---HHHHHHHHHHHGGGTCCEEEESC---------CC---S
T ss_pred HHHHHHH---HcCCCEEEECCCCCcccccccccCCCccc---hhHHHHHHHHHhhCCCCEEEECC---------CC---C
Confidence 6544433 34 89999964 211 011222 22334445556667999997422 11 2
Q ss_pred hhhHHHHHHhCCcEEEecC
Q psy259 203 ISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS~ 221 (398)
..|++.|+..|||+||+..
T Consensus 370 ~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 370 VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp HHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHHHcCCCeeeECH
Confidence 4689999999999999964
No 40
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.37 E-value=24 Score=34.76 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=68.9
Q ss_pred HHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-eecChHHHhcHHHH
Q psy259 65 VDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-KIENHQGVKNLDEI 141 (398)
Q Consensus 65 ~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-KIE~~~~v~n~deI 141 (398)
.+.++.++++|..+-. .+++ ..-.+++.|+++|+. + +++||+ .+-+.+... ..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G--------------~~~~~~~~i~~i~~~--~-----~~~Vivg~v~t~e~A~---~l 162 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHG--------------HSLNIIRTLKEIKSK--M-----NIDVIVGNVVTEEATK---EL 162 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC--------------SBHHHHHHHHHHHHH--C-----CCEEEEEEECSHHHHH---HH
T ss_pred HHHHHHHHHcCcCeEEEeCCCC--------------CcHHHHHHHHHHHHh--c-----CCcEEEccCCCHHHHH---HH
Confidence 6777777777754422 1111 112234556666665 3 467775 676665543 34
Q ss_pred HHh-cCeeEEcCCCCCCCC-------ChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhC
Q psy259 142 IAE-ADGIMVARGDLGIEI-------PPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDG 213 (398)
Q Consensus 142 l~~-sDgimvaRgDLg~e~-------~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG 213 (398)
++. +|+|.|+-|.=++.. +.+. ..+-+++.+.++..+.|||.+- ..-+ ..|++.|+..|
T Consensus 163 ~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~G---------GI~~---~~di~kala~G 229 (361)
T 3khj_A 163 IENGADGIKVGIGPGSICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADG---------GIRY---SGDIGKALAVG 229 (361)
T ss_dssp HHTTCSEEEECSSCCTTCCHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEES---------CCCS---HHHHHHHHHHT
T ss_pred HHcCcCEEEEecCCCcCCCcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEEC---------CCCC---HHHHHHHHHcC
Confidence 445 899999622111111 1122 2234455555677799999642 2222 25899999999
Q ss_pred CcEEEec
Q psy259 214 ADCVMLS 220 (398)
Q Consensus 214 ~D~vmLS 220 (398)
||+||+.
T Consensus 230 Ad~V~vG 236 (361)
T 3khj_A 230 ASSVMIG 236 (361)
T ss_dssp CSEEEES
T ss_pred CCEEEEC
Confidence 9999995
No 41
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=82.57 E-value=37 Score=33.56 Aligned_cols=97 Identities=24% Similarity=0.352 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHhhchhcCCcccEEE-eecChHHHhcHHHHHHh-cCeeEEcCCCCCCC-------CChhhHHHHHHHHHH
Q psy259 103 YESNVRLIEKLMATGEQGKHIKIIA-KIENHQGVKNLDEIIAE-ADGIMVARGDLGIE-------IPPWKVFLAQKQMIA 173 (398)
Q Consensus 103 ~vddV~~ir~~~~l~~~~~~~~iia-KIE~~~~v~n~deIl~~-sDgimvaRgDLg~e-------~~~~~v~~~qk~ii~ 173 (398)
+++.|+++|+. . .++.||+ .+-+.+....+ .+. +|+|.++-|.=+.. .+.+.+ .+-+.+.+
T Consensus 136 ~~~~I~~ik~~--~----p~v~Vi~G~v~t~e~A~~a---~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~-~~l~~v~~ 205 (366)
T 4fo4_A 136 VLQRIRETRAA--Y----PHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGSICTTRIVTGVGVPQI-TAIADAAG 205 (366)
T ss_dssp HHHHHHHHHHH--C----TTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSTTBCHHHHHCCCCCHH-HHHHHHHH
T ss_pred HHHHHHHHHHh--c----CCCceEeeeeCCHHHHHHH---HHcCCCEEEEecCCCCCCCcccccCcccchH-HHHHHHHH
Confidence 34456666665 3 2566766 47776655443 344 99999952211110 111221 23344556
Q ss_pred HHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 174 KCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 174 ~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
.|+..+.|||.+-- .-+ ..|++.|+..|||+||+..
T Consensus 206 ~~~~~~iPVIA~GG---------I~~---~~di~kala~GAd~V~vGs 241 (366)
T 4fo4_A 206 VANEYGIPVIADGG---------IRF---SGDISKAIAAGASCVMVGS 241 (366)
T ss_dssp HHGGGTCCEEEESC---------CCS---HHHHHHHHHTTCSEEEEST
T ss_pred HHhhcCCeEEEeCC---------CCC---HHHHHHHHHcCCCEEEECh
Confidence 66678999996422 212 3589999999999999953
No 42
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=81.47 E-value=7 Score=37.56 Aligned_cols=101 Identities=15% Similarity=0.201 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhchh----cCCcccEEEeecChHHHhcHHHHHH----h-cCeeEEcCCCCCC----------CC----Ch
Q psy259 105 SNVRLIEKLMATGE----QGKHIKIIAKIENHQGVKNLDEIIA----E-ADGIMVARGDLGI----------EI----PP 161 (398)
Q Consensus 105 ddV~~ir~~~~l~~----~~~~~~iiaKIE~~~~v~n~deIl~----~-sDgimvaRgDLg~----------e~----~~ 161 (398)
+.+..+|+. ..+ .|.+..|+.||-.-...+++.++++ . +|+|.|.-+-.+. +. +.
T Consensus 192 ~il~~vr~~--~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~ 269 (336)
T 1f76_A 192 DLLTAIKNK--QNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGR 269 (336)
T ss_dssp HHHHHHHHH--HHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEG
T ss_pred HHHHHHHHH--HHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCc
Confidence 356677776 422 2557899999843211123333332 2 7999986321111 11 11
Q ss_pred hhHHHHHHHHHHHHHH-c--CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 162 WKVFLAQKQMIAKCNK-V--GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 162 ~~v~~~qk~ii~~c~~-~--gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
...+ ..-..++..++ . +.|||... ..-| ..|+..++..|||+||+.
T Consensus 270 ~~~~-~~~~~i~~i~~~~~~~ipVi~~G---------GI~~---~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 270 PLQL-KSTEIIRRLSLELNGRLPIIGVG---------GIDS---VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp GGHH-HHHHHHHHHHHHHTTSSCEEEES---------SCCS---HHHHHHHHHHTCSEEEES
T ss_pred hhHH-HHHHHHHHHHHHhCCCCCEEEEC---------CCCC---HHHHHHHHHCCCCEEEee
Confidence 1122 23334444443 4 78999742 2222 358899999999999996
No 43
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=80.54 E-value=8.9 Score=37.63 Aligned_cols=96 Identities=28% Similarity=0.286 Sum_probs=58.6
Q ss_pred cHHHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHh-cCeeEEcCCCC---------CCCCChhhHHHHHHHH
Q psy259 103 YESNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAE-ADGIMVARGDL---------GIEIPPWKVFLAQKQM 171 (398)
Q Consensus 103 ~vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~-sDgimvaRgDL---------g~e~~~~~v~~~qk~i 171 (398)
+.++|+++|+. . .++.|+++ +-+.+.. ....+. +|+|.|+-|-= +...|. ...-..+
T Consensus 148 ~~~~i~~lr~~--~----~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~---~~~l~~v 215 (351)
T 2c6q_A 148 FVEFVKDVRKR--F----PQHTIMAGNVVTGEMV---EELILSGADIIKVGIGPGSVCTTRKKTGVGYPQ---LSAVMEC 215 (351)
T ss_dssp HHHHHHHHHHH--C----TTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCH---HHHHHHH
T ss_pred HHHHHHHHHHh--c----CCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCCCcCcCccccCCCCccH---HHHHHHH
Confidence 45677777776 4 14667664 5554332 233344 89999974321 111222 2233455
Q ss_pred HHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 172 IAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 172 i~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
.+.|...+.|||.+--+- --.||+.|+..|||+|++..-
T Consensus 216 ~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~~ 254 (351)
T 2c6q_A 216 ADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGGM 254 (351)
T ss_dssp HHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccHH
Confidence 666777789999743221 246999999999999998643
No 44
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=79.67 E-value=8.6 Score=37.26 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=52.6
Q ss_pred cHHHHHHHHHHhhchhcCCcccEEEee-cChHHHhcHHHHHHh-cCeeEEc-CCCC---C-------------CCCChhh
Q psy259 103 YESNVRLIEKLMATGEQGKHIKIIAKI-ENHQGVKNLDEIIAE-ADGIMVA-RGDL---G-------------IEIPPWK 163 (398)
Q Consensus 103 ~vddV~~ir~~~~l~~~~~~~~iiaKI-E~~~~v~n~deIl~~-sDgimva-RgDL---g-------------~e~~~~~ 163 (398)
|.+.|.++|+. . +++|+.|+ -.-...+......+. +|+|.|. .|.- - ...+...
T Consensus 166 ~~~~i~~vr~~--~-----~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~ 238 (349)
T 1p0k_A 166 ALKRIEQICSR--V-----SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGIST 238 (349)
T ss_dssp HHHHHHHHHHH--C-----SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCH
T ss_pred HHHHHHHHHHH--c-----CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccH
Confidence 66778888877 4 57899996 111112223333344 8999995 2210 0 1111111
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 164 VFLAQKQMIAKCNKV-GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 164 v~~~qk~ii~~c~~~-gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+...+++. ... +.|+|.. ...-| ..|+..++..|||+|++..
T Consensus 239 -~~~l~~v~---~~~~~ipvia~---------GGI~~---~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 239 -AASLAEIR---SEFPASTMIAS---------GGLQD---ALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp -HHHHHHHH---HHCTTSEEEEE---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred -HHHHHHHH---HhcCCCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEEcH
Confidence 11222222 223 6888863 22333 3589999999999999964
No 45
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=79.09 E-value=14 Score=35.31 Aligned_cols=148 Identities=15% Similarity=0.210 Sum_probs=89.4
Q ss_pred ceeEEEeCCCCCCHHHHHHHH----Hhcccccc-cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEE
Q psy259 52 TGIICTIGPASVAVDMLEKII----ETESNSDE-CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKII 126 (398)
Q Consensus 52 t~Iictigp~~~~~e~l~~~i----~~Gmnvr~-~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~ii 126 (398)
.-||+-++ +..|.|...+++ ++|.+.-+ +..+|+ +..|..++- .-+..+.++++ ..+. .+.++
T Consensus 39 ~~vIAgpc-~~~~~e~a~~~a~~~k~~ga~~~k~~~~kpr---ts~~~f~g~----g~~gl~~l~~~--~~~~--Gl~~~ 106 (276)
T 1vs1_A 39 KAVIAGPC-SVESWEQVREAALAVKEAGAHMLRGGAFKPR---TSPYSFQGL----GLEGLKLLRRA--GDEA--GLPVV 106 (276)
T ss_dssp CEEEEECS-BCCCHHHHHHHHHHHHHHTCSEEECBSSCCC---SSTTSCCCC----THHHHHHHHHH--HHHH--TCCEE
T ss_pred eEEEEecC-CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCC---CChhhhcCC----CHHHHHHHHHH--HHHc--CCcEE
Confidence 55777555 444666655544 67877733 333321 112222221 23456777777 5544 48899
Q ss_pred EeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhh
Q psy259 127 AKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISD 205 (398)
Q Consensus 127 aKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsD 205 (398)
+-+-+.+.++-+.+. .|.+=|+-+++ . +..+++.+-+.||||++. ++. .|-.|+..
T Consensus 107 te~~d~~~~~~l~~~---vd~~kIgs~~~------~-----n~~ll~~~a~~~kPV~lk---------~G~~~t~~ei~~ 163 (276)
T 1vs1_A 107 TEVLDPRHVETVSRY---ADMLQIGARNM------Q-----NFPLLREVGRSGKPVLLK---------RGFGNTVEELLA 163 (276)
T ss_dssp EECCCGGGHHHHHHH---CSEEEECGGGT------T-----CHHHHHHHHHHTCCEEEE---------CCTTCCHHHHHH
T ss_pred EecCCHHHHHHHHHh---CCeEEECcccc------c-----CHHHHHHHHccCCeEEEc---------CCCCCCHHHHHH
Confidence 999888887777664 79999996655 2 223455566789999984 444 47778887
Q ss_pred HHHHHHh-CC-cEEEe-cCccCCCCChHHHHH
Q psy259 206 VANAVLD-GA-DCVML-SGETAKGDYPVECVR 234 (398)
Q Consensus 206 Vanav~d-G~-D~vmL-S~ETA~G~yP~eaV~ 234 (398)
.++++.. |. +.+++ .|=+..-.||.+.|.
T Consensus 164 Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vd 195 (276)
T 1vs1_A 164 AAEYILLEGNWQVVLVERGIRTFEPSTRFTLD 195 (276)
T ss_dssp HHHHHHHTTCCCEEEEECCBCCSCCSSSSBCB
T ss_pred HHHHHHHcCCCeEEEEeCCcCCCCCcCcchhC
Confidence 7887754 65 44443 344444456755544
No 46
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=78.93 E-value=23 Score=35.92 Aligned_cols=126 Identities=17% Similarity=0.305 Sum_probs=75.0
Q ss_pred EeCCCCCCHHHHHHHHHhcccccc--cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe-ecChH
Q psy259 57 TIGPASVAVDMLEKIIETESNSDE--CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK-IENHQ 133 (398)
Q Consensus 57 tigp~~~~~e~l~~~i~~Gmnvr~--~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~ 133 (398)
-+|+.....+.++.++++|.++-. +.++ ....+.+.|.++|+. .. ++.|+.+ +-+.+
T Consensus 231 ~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G--------------~~~~~~e~i~~i~~~--~p----~~pvi~g~~~t~e 290 (494)
T 1vrd_A 231 AVGTSPETMERVEKLVKAGVDVIVIDTAHG--------------HSRRVIETLEMIKAD--YP----DLPVVAGNVATPE 290 (494)
T ss_dssp EECSSTTHHHHHHHHHHTTCSEEEECCSCC--------------SSHHHHHHHHHHHHH--CT----TSCEEEEEECSHH
T ss_pred ccCcCHhHHHHHHHHHHhCCCEEEEEecCC--------------chHHHHHHHHHHHHH--CC----CceEEeCCcCCHH
Confidence 466655668899999999966533 2222 112245567777777 52 3555553 44444
Q ss_pred HHhcHHHHHHh-cCeeEEcCCCCC---------CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhh
Q psy259 134 GVKNLDEIIAE-ADGIMVARGDLG---------IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEI 203 (398)
Q Consensus 134 ~v~n~deIl~~-sDgimvaRgDLg---------~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEv 203 (398)
.. ....+. +|+|.|+-|-=+ ...|. ......+.+.++..+.|||.+.- .- -.
T Consensus 291 ~a---~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipvia~GG---------I~---~~ 352 (494)
T 1vrd_A 291 GT---EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ---LTAVMECSEVARKYDVPIIADGG---------IR---YS 352 (494)
T ss_dssp HH---HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH---HHHHHHHHHHHHTTTCCEEEESC---------CC---SH
T ss_pred HH---HHHHHcCCCEEEEcCCCCccccccccCCCCccH---HHHHHHHHHHHhhcCCCEEEECC---------cC---CH
Confidence 33 233334 899999543111 11222 22334455555566899997422 22 23
Q ss_pred hhHHHHHHhCCcEEEec
Q psy259 204 SDVANAVLDGADCVMLS 220 (398)
Q Consensus 204 sDVanav~dG~D~vmLS 220 (398)
.|++.|+..|||+|++.
T Consensus 353 ~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 353 GDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 69999999999999985
No 47
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=78.11 E-value=6.5 Score=37.94 Aligned_cols=194 Identities=14% Similarity=0.084 Sum_probs=102.3
Q ss_pred CCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe---ec--ChHHHhcHHHHHHh----cCeeEEcCCCCCCCCChhh
Q psy259 93 EPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK---IE--NHQGVKNLDEIIAE----ADGIMVARGDLGIEIPPWK 163 (398)
Q Consensus 93 ~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK---IE--~~~~v~n~deIl~~----sDgimvaRgDLg~e~~~~~ 163 (398)
|.-|+-.++.|=-. ..++.+ +.....+..|++. ++ -..+++++++.+.. +|+|++-+|=+.
T Consensus 28 ~~~~~~~~~~~Gk~-~Rl~ri--~~~~~G~~~iv~~DHG~~~gp~~gl~~~~~~i~~l~~g~dav~~~~G~~~------- 97 (295)
T 3glc_A 28 FTLKGCGALDWGMQ-SRLSRI--FNPKTGKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILR------- 97 (295)
T ss_dssp CCSTTCTTSCHHHH-HHHHHH--SCTTTSCEEEEECCTHHHHCSCTTCTTHHHHTGGGGGGCSEEEECHHHHH-------
T ss_pred eeeecccccchHHH-HHHHHh--cCCCCCCEEEEecCCCcccCCCCchhhhHHHHHHhhcCCCEEEECHhHHh-------
Confidence 55677777766111 344556 5544345555552 11 12466777665542 799998876221
Q ss_pred HHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 164 VFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 164 v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
.... ...++|.|+-...=.|+.. ..+...-+..|..|+..|+|+|-+..=.. ..+.-+.++.+.+++.++
T Consensus 98 ------~~~~--~~~~~~lil~l~~~t~~~~-~~~~~~l~~~ve~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a 167 (295)
T 3glc_A 98 ------SVVP--PATNRPVVLRASGANSILA-ELSNEAVALSMDDAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAG 167 (295)
T ss_dssp ------HHSC--GGGCCCEEEECEECCCTTS-CTTCCEECSCHHHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHH
T ss_pred ------hhcc--ccCCccEEEEEcCCCcCCC-CCccchhHHHHHHHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHH
Confidence 1111 1247888885433333322 22233334789999999999998843222 334557777788888877
Q ss_pred HhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEe
Q psy259 244 EAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVT 312 (398)
Q Consensus 244 E~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT 312 (398)
+..- ..+.-+.........+ .+.+ ..++++|.+++|+.|-+. .+|.+-+.+...- ++||++.-
T Consensus 168 ~~~G--lpvIie~~~G~~~~~d-~e~i-~~aariA~elGAD~VKt~-~t~e~~~~vv~~~-~vPVv~~G 230 (295)
T 3glc_A 168 MKVG--MPTMAVTGVGKDMVRD-QRYF-SLATRIAAEMGAQIIKTY-YVEKGFERIVAGC-PVPIVIAG 230 (295)
T ss_dssp HTTT--CCEEEEECC----CCS-HHHH-HHHHHHHHHTTCSEEEEE-CCTTTHHHHHHTC-SSCEEEEC
T ss_pred HHcC--CEEEEECCCCCccCCC-HHHH-HHHHHHHHHhCCCEEEeC-CCHHHHHHHHHhC-CCcEEEEE
Confidence 6531 0000000000000112 2333 346778899999965543 4454434444333 36777654
No 48
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=74.64 E-value=14 Score=36.66 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=55.7
Q ss_pred CCCCc-ccHHHHHHHHHHhhchhcCCcccEEEe-e---cChHHHhcHHHHHHh-cCeeEEc-CCCCCC------------
Q psy259 97 CKEPN-LYESNVRLIEKLMATGEQGKHIKIIAK-I---ENHQGVKNLDEIIAE-ADGIMVA-RGDLGI------------ 157 (398)
Q Consensus 97 ~~~~~-~~vddV~~ir~~~~l~~~~~~~~iiaK-I---E~~~~v~n~deIl~~-sDgimva-RgDLg~------------ 157 (398)
++.++ -|++.|+++|+. . +++|++| + -+++ ......+. +|+|.|+ +|--..
T Consensus 187 Gd~~~~~~~~~I~~l~~~--~-----~~PVivK~vg~g~s~e---~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~ 256 (365)
T 3sr7_A 187 GEREFRSWKKHLSDYAKK--L-----QLPFILKEVGFGMDVK---TIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRS 256 (365)
T ss_dssp SCCCCHHHHHHHHHHHHH--C-----CSCEEEEECSSCCCHH---HHHHHHHHTCCEEECCCBC--------------CG
T ss_pred CCCcHHHHHHHHHHHHHh--h-----CCCEEEEECCCCCCHH---HHHHHHHcCCCEEEEeCCCCcccchhhcccccccc
Confidence 33444 577888999887 5 5789999 3 2332 22333344 8999984 221100
Q ss_pred ---CCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 158 ---EIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 158 ---e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+.+.+... .+..++.. ..|+|...- .-+ -.||+.|+.-|||+||+..
T Consensus 257 ~~~~~g~pt~~-----~L~~v~~~~~~ipvia~GG---------I~~---g~Dv~KaLalGAdaV~ig~ 308 (365)
T 3sr7_A 257 YLNQWGQTTAQ-----VLLNAQPLMDKVEILASGG---------IRH---PLDIIKALVLGAKAVGLSR 308 (365)
T ss_dssp GGTTCSCBHHH-----HHHHHGGGTTTSEEEECSS---------CCS---HHHHHHHHHHTCSEEEESH
T ss_pred ccccccccHHH-----HHHHHHHhcCCCeEEEeCC---------CCC---HHHHHHHHHcCCCEEEECH
Confidence 11222111 11223343 467776322 222 3699999999999999964
No 49
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=74.55 E-value=18 Score=35.62 Aligned_cols=136 Identities=18% Similarity=0.235 Sum_probs=67.8
Q ss_pred eeEEEeCCCCCCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe-ecC
Q psy259 53 GIICTIGPASVAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK-IEN 131 (398)
Q Consensus 53 ~Iictigp~~~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~ 131 (398)
.+++.++|. +..|..+.+.++|.+.-.+.-. ..+.+...... ..+||.++|+. . +++||+| |-+
T Consensus 157 ~v~~~v~~~-~~~e~a~~~~~agad~i~i~~~------~~~~~~~~~~~-~~~~i~~l~~~--~-----~~pvi~ggi~t 221 (393)
T 2qr6_A 157 IVAVRVSPQ-NVREIAPIVIKAGADLLVIQGT------LISAEHVNTGG-EALNLKEFIGS--L-----DVPVIAGGVND 221 (393)
T ss_dssp CCEEEECTT-THHHHHHHHHHTTCSEEEEECS------SCCSSCCCC------CHHHHHHH--C-----SSCEEEECCCS
T ss_pred eEEEEeCCc-cHHHHHHHHHHCCCCEEEEeCC------ccccccCCCcc-cHHHHHHHHHh--c-----CCCEEECCcCC
Confidence 455566663 4455566666777654221100 00000001111 23356777776 3 5677775 444
Q ss_pred hHHHhcHHHHHHh-cCeeEEcCCCC------CCCCChhhHHHHHHHHHHHH----HHcC---CCEEEeehhhHHhhcCCC
Q psy259 132 HQGVKNLDEIIAE-ADGIMVARGDL------GIEIPPWKVFLAQKQMIAKC----NKVG---KPVICATQMLESMIKKPR 197 (398)
Q Consensus 132 ~~~v~n~deIl~~-sDgimvaRgDL------g~e~~~~~v~~~qk~ii~~c----~~~g---kpvi~ATQmLeSMi~~~~ 197 (398)
++.. ...++. +|+|+|++|-- +..+|... .-.++.+.| .+.+ .|||.+.- .
T Consensus 222 ~e~a---~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~---~l~~v~~~~~~~~~~~~~~~ipvia~GG---------I 286 (393)
T 2qr6_A 222 YTTA---LHMMRTGAVGIIVGGGENTNSLALGMEVSMAT---AIADVAAARRDYLDETGGRYVHIIADGS---------I 286 (393)
T ss_dssp HHHH---HHHHTTTCSEEEESCCSCCHHHHTSCCCCHHH---HHHHHHHHHHHHHHHHTSCCCEEEECSS---------C
T ss_pred HHHH---HHHHHcCCCEEEECCCcccccccCCCCCChHH---HHHHHHHHHHHhHhhcCCcceEEEEECC---------C
Confidence 3332 222333 89999987531 11123211 112222232 2245 78886422 2
Q ss_pred CCchhhhhHHHHHHhCCcEEEecC
Q psy259 198 ATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 198 PtraEvsDVanav~dG~D~vmLS~ 221 (398)
-+ ..||..|+..|||+||+..
T Consensus 287 ~~---~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 287 EN---SGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp CS---HHHHHHHHHHTCSEEEECG
T ss_pred CC---HHHHHHHHHcCCCEEEECH
Confidence 22 3699999999999999954
No 50
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=73.14 E-value=21 Score=35.34 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHH----HHHHHHHHHHHH
Q psy259 104 ESNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVF----LAQKQMIAKCNK 177 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~----~~qk~ii~~c~~ 177 (398)
.+.|..+|+. . .+++||+| +-+++... ...+. +|+|.|+-|- |-.. ..+.. ..|-..+..|.+
T Consensus 129 ~e~I~~ir~~--~----~~~~Vi~G~V~T~e~A~---~a~~aGaD~I~Vg~g~-G~~~-~tr~~~g~g~p~l~aI~~~~~ 197 (361)
T 3r2g_A 129 GKTLKSLRQL--L----GSRCIMAGNVATYAGAD---YLASCGADIIKAGIGG-GSVC-STRIKTGFGVPMLTCIQDCSR 197 (361)
T ss_dssp HHHHHHHHHH--H----TTCEEEEEEECSHHHHH---HHHHTTCSEEEECCSS-SSCH-HHHHHHCCCCCHHHHHHHHTT
T ss_pred HHHHHHHHHh--c----CCCeEEEcCcCCHHHHH---HHHHcCCCEEEEcCCC-CcCc-cccccCCccHHHHHHHHHHHH
Confidence 3466777765 3 25789996 77766543 33344 8999995321 1100 00000 013344555555
Q ss_pred cCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 178 VGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 178 ~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
..+|||..- ..- .-.|++.|+..|||+||+.
T Consensus 198 ~~~PVIAdG---------GI~---~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 198 ADRSIVADG---------GIK---TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp SSSEEEEES---------CCC---SHHHHHHHHHTTCSEEEES
T ss_pred hCCCEEEEC---------CCC---CHHHHHHHHHcCCCEEEEC
Confidence 555888632 221 2368999999999999995
No 51
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=72.80 E-value=19 Score=36.64 Aligned_cols=64 Identities=28% Similarity=0.361 Sum_probs=39.2
Q ss_pred hcCeeEEcCCC---------CCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCC
Q psy259 144 EADGIMVARGD---------LGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGA 214 (398)
Q Consensus 144 ~sDgimvaRgD---------Lg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~ 214 (398)
=+|+|.|+.|- .++..|.- ..-..+.+.+.+.+.|||.+-- .=+ -.|++.|+..||
T Consensus 287 G~d~v~vg~g~g~~~~~r~~~~~g~~~~---~~l~~~~~~~~~~~vpVia~GG---------i~~---~~di~kalalGA 351 (486)
T 2cu0_A 287 FADAVKVGIGPGSICTTRIVAGVGVPQI---TAVAMVADRAQEYGLYVIADGG---------IRY---SGDIVKAIAAGA 351 (486)
T ss_dssp TSSEEEECSSCSTTBCHHHHTCCCCCHH---HHHHHHHHHHHHHTCEEEEESC---------CCS---HHHHHHHHHTTC
T ss_pred CCCeEEEeeeeccceeeeEEeecCcchH---HHHHHHHHHHHHcCCcEEecCC---------CCC---HHHHHHHHHcCC
Confidence 47888885543 22222321 2223333445566899997532 222 369999999999
Q ss_pred cEEEecCc
Q psy259 215 DCVMLSGE 222 (398)
Q Consensus 215 D~vmLS~E 222 (398)
|+||+..-
T Consensus 352 ~~v~~g~~ 359 (486)
T 2cu0_A 352 DAVMLGNL 359 (486)
T ss_dssp SEEEESTT
T ss_pred CceeeChh
Confidence 99999653
No 52
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=72.76 E-value=14 Score=38.12 Aligned_cols=95 Identities=15% Similarity=0.170 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHh-cCeeEEc-CCCCCCCCChhhHHHHHHHHHHHHHH---
Q psy259 104 ESNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAE-ADGIMVA-RGDLGIEIPPWKVFLAQKQMIAKCNK--- 177 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~-sDgimva-RgDLg~e~~~~~v~~~qk~ii~~c~~--- 177 (398)
.++|..+|+. . +++|+.| +-+ .+......+. +|+|.|+ .|--.++..... ..+...+.+.+..
T Consensus 332 ~~~i~~lr~~--~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~ 400 (511)
T 1kbi_A 332 WKDIEELKKK--T-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNL 400 (511)
T ss_dssp HHHHHHHHHH--C-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHH--h-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhcc
Confidence 3578888887 4 5788888 333 2222222333 8999994 221112222222 2233445454432
Q ss_pred -cCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 178 -VGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 178 -~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
...|||... ..=+ ..||..|+..|||+||+..
T Consensus 401 ~~~ipVia~G---------GI~~---g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 401 KDKLEVFVDG---------GVRR---GTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp BTTBEEEEES---------SCCS---HHHHHHHHHHTCSEEEECH
T ss_pred CCCcEEEEEC---------CCCC---HHHHHHHHHcCCCEEEECH
Confidence 257888642 2222 3699999999999999964
No 53
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=72.76 E-value=17 Score=36.53 Aligned_cols=165 Identities=12% Similarity=0.220 Sum_probs=98.1
Q ss_pred hhcccCCCCCCCc-ccccceeEEEeCCCCC-CHHHHHHHHH----hcccccccCC---CC--CCCCCCCCCCC-CCCCcc
Q psy259 35 DHLCGLDIDNKSS-YVRLTGIICTIGPASV-AVDMLEKIIE----TESNSDECSE---KP--RECPSEPEPPH-CKEPNL 102 (398)
Q Consensus 35 ~h~~~L~i~~~~~-~~r~t~Iictigp~~~-~~e~l~~~i~----~Gmnvr~~~~---~~--~pgp~~~~~~k-~~~~~~ 102 (398)
.||+..+|..... ....+-||+=||+..+ |.|..++|++ +|.+.-+|.. .. .|- ..-|.-+ +....+
T Consensus 11 ~~~~~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~-~~~fq~~~~~~~~~ 89 (385)
T 1vli_A 11 HHMAAFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKD-PGLYKTAAGKDVSI 89 (385)
T ss_dssp ---CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCC-C---------CCCH
T ss_pred hhhhheeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcc-hhhhccCCCCCccH
Confidence 4666666654332 2346789999998655 7888777775 7888844222 11 010 0001100 001122
Q ss_pred c---------HHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHH
Q psy259 103 Y---------ESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMI 172 (398)
Q Consensus 103 ~---------vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii 172 (398)
| .++..+++++ ..+. .+.+++-+=+.++++-++ +. .|.+=||-+|+. .. .++
T Consensus 90 ye~~~~~~l~~e~~~~L~~~--~~~~--Gi~~~stpfD~~svd~l~---~~~vd~~KIgS~~~~------N~-----pLL 151 (385)
T 1vli_A 90 FSLVQSMEMPAEWILPLLDY--CREK--QVIFLSTVCDEGSADLLQ---STSPSAFKIASYEIN------HL-----PLL 151 (385)
T ss_dssp HHHGGGBSSCGGGHHHHHHH--HHHT--TCEEECBCCSHHHHHHHH---TTCCSCEEECGGGTT------CH-----HHH
T ss_pred HHHHHhcCCCHHHHHHHHHH--HHHc--CCcEEEccCCHHHHHHHH---hcCCCEEEECccccc------CH-----HHH
Confidence 2 2255666666 4443 588888777777765554 44 799999988773 22 246
Q ss_pred HHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHh-CC-cEEEecCccCCCCChH
Q psy259 173 AKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLD-GA-DCVMLSGETAKGDYPV 230 (398)
Q Consensus 173 ~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~d-G~-D~vmLS~ETA~G~yP~ 230 (398)
+++-+.|||||+.|-| -|-.|+...++.+.. |. +.++|=+ .-.||.
T Consensus 152 ~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~~iiLlhc---~s~YPt 199 (385)
T 1vli_A 152 KYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNNQIAIMHC---VAKYPA 199 (385)
T ss_dssp HHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCCCEEEEEE---CSSSSC
T ss_pred HHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCCcEEEEec---cCCCCC
Confidence 6677889999997765 377899888888875 65 6666632 334763
No 54
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=71.22 E-value=7.3 Score=36.35 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=49.4
Q ss_pred cHHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCC
Q psy259 103 YESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKP 181 (398)
Q Consensus 103 ~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkp 181 (398)
..+.|+++|+. +. +..|-+ -+.--.+..+..+++ +|.|+. ++ .-..+++.|+++|.|
T Consensus 72 a~e~I~~l~~~--~~----~~~iGa--GTVlt~~~a~~Ai~AGA~fIvs-P~-------------~~~~vi~~~~~~gi~ 129 (232)
T 4e38_A 72 AVEAIRLLRQA--QP----EMLIGA--GTILNGEQALAAKEAGATFVVS-PG-------------FNPNTVRACQEIGID 129 (232)
T ss_dssp HHHHHHHHHHH--CT----TCEEEE--ECCCSHHHHHHHHHHTCSEEEC-SS-------------CCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHh--CC----CCEEeE--CCcCCHHHHHHHHHcCCCEEEe-CC-------------CCHHHHHHHHHcCCC
Confidence 34566677765 42 222222 222234555666666 777752 23 123577889999999
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEe
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVML 219 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmL 219 (398)
++- --.-.+++..|...|+|.|.+
T Consensus 130 ~ip--------------Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 130 IVP--------------GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp EEC--------------EECSHHHHHHHHHTTCCEEEE
T ss_pred EEc--------------CCCCHHHHHHHHHcCCCEEEE
Confidence 863 122345679999999999988
No 55
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=70.12 E-value=3 Score=39.72 Aligned_cols=130 Identities=13% Similarity=0.198 Sum_probs=72.1
Q ss_pred CCCHHHHHHHHHhcccccc----cCCCCCCCCC--C----CCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeec-
Q psy259 62 SVAVDMLEKIIETESNSDE----CSEKPRECPS--E----PEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIE- 130 (398)
Q Consensus 62 ~~~~e~l~~~i~~Gmnvr~----~~~~~~pgp~--~----~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE- 130 (398)
..+.+.++.|.++|.++-+ ||....-||. . .+. .+..---+.+-|+++|+. +.+++++.+.-
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~-~G~~~~~~~~~v~~ir~~------~~~~Pivlm~Y~ 104 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLA-AGTTSSDCFDIITKVRAQ------HPDMPIGLLLYA 104 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHH------CTTCCEEEEECH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhc------CCCCCEEEEecC
Confidence 3467779999999999966 6542111762 1 111 010000112344555543 34677887765
Q ss_pred Ch---HHHhcH-HHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhh
Q psy259 131 NH---QGVKNL-DEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISD 205 (398)
Q Consensus 131 ~~---~~v~n~-deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsD 205 (398)
|+ -|++++ ++..++ +||++|. || |.|+ ....++.|+++|...|.. -+|.-+.. .
T Consensus 105 npv~~~g~e~f~~~~~~aGvdgvii~--Dl----p~ee----~~~~~~~~~~~gl~~i~l--------iaP~t~~e---r 163 (267)
T 3vnd_A 105 NLVFANGIDEFYTKAQAAGVDSVLIA--DV----PVEE----SAPFSKAAKAHGIAPIFI--------APPNADAD---T 163 (267)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEECE--------ECTTCCHH---H
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEeC--CC----CHhh----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---H
Confidence 54 366665 444444 8999995 55 4444 456788899999876642 23333322 3
Q ss_pred HHHHHHhCCcEEEe
Q psy259 206 VANAVLDGADCVML 219 (398)
Q Consensus 206 Vanav~dG~D~vmL 219 (398)
+......+.+.|-+
T Consensus 164 i~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 164 LKMVSEQGEGYTYL 177 (267)
T ss_dssp HHHHHHHCCSCEEE
T ss_pred HHHHHHhCCCcEEE
Confidence 44455555555655
No 56
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=69.82 E-value=11 Score=38.24 Aligned_cols=153 Identities=18% Similarity=0.205 Sum_probs=95.4
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeecC--hHHHhcHHHHH
Q psy259 65 VDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIEN--HQGVKNLDEII 142 (398)
Q Consensus 65 ~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~--~~~v~n~deIl 142 (398)
++.+.+|.++|..+.+++-. +.--...+.+||+- |...|.+++++|-|== +-++..+++..
T Consensus 41 v~QI~~L~~aG~eiVRvaVp---------------~~~~A~al~~I~~~--l~~~~~~vPLVADiHF~~~~al~a~~~~a 103 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLTVN---------------DEEAAKAVPEIKRR--LLAEGVEVPLVGDFHFNGHLLLRKYPKMA 103 (406)
T ss_dssp HHHHHHHHHHTCSEEEEECC---------------SHHHHHHHHHHHHH--HHHTTCCCCEEEECCSSHHHHHHHCHHHH
T ss_pred HHHHHHHHHcCCCEEEEecC---------------CHHHHHhHHHHHHH--HHhcCCCCceEeeecccHHHHHHHHHHHH
Confidence 56678888888666443321 11111245677776 7777889999997742 45777778888
Q ss_pred HhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee-------hhhHHhh----cCCCCCch-----hhhhH
Q psy259 143 AEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT-------QMLESMI----KKPRATRA-----EISDV 206 (398)
Q Consensus 143 ~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT-------QmLeSMi----~~~~Ptra-----EvsDV 206 (398)
+..|.+-|.||.+|-. .+-..--+.+++.|+++|+|+=+-. .+|+.+- ..|.|.-+ |. =|
T Consensus 104 ~~~dkiRINPGNig~~---~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~ea-mV 179 (406)
T 4g9p_A 104 EALDKFRINPGTLGRG---RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEA-LV 179 (406)
T ss_dssp HHCSEEEECTTSSCST---HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHH-HH
T ss_pred hHHhhcccCccccCcc---ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHH-HH
Confidence 8899999999988632 3334455789999999999976544 4555543 23445322 21 12
Q ss_pred HHHH-------HhCC--cEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 207 ANAV-------LDGA--DCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 207 anav-------~dG~--D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
..|+ ..|. |=+++|- +-.-+...|+.-+.+++
T Consensus 180 eSAl~~~~~~~~~~f~~~~iviS~---KaSdv~~~i~aYr~la~ 220 (406)
T 4g9p_A 180 ESAVRAYEAALEMGLGEDKLVLSA---KVSKARDLVWVYRELAR 220 (406)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEE---ECSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhheEEEe---ecCCHHHHHHHHHHHHH
Confidence 2222 2344 5588874 44457777766665554
No 57
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=67.89 E-value=57 Score=32.09 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=77.0
Q ss_pred ceeEEEeCCCCCCHHHHHHHHHhccccccc--CCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE-e
Q psy259 52 TGIICTIGPASVAVDMLEKIIETESNSDEC--SEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA-K 128 (398)
Q Consensus 52 t~Iictigp~~~~~e~l~~~i~~Gmnvr~~--~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia-K 128 (398)
..+.+.+|+.....+.++.++++|.++-.+ +++ + .-.+.+.|.++|+. .+ +++|+. -
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g-------------~-~~~~~e~i~~ir~~--~~----~~pviv~~ 201 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHG-------------H-STRIIELIKKIKTK--YP----NLDLIAGN 201 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCC-------------S-SHHHHHHHHHHHHH--CT----TCEEEEEE
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCC-------------C-hHHHHHHHHHHHHH--CC----CCeEEEcC
Confidence 356777887556678899999999665432 111 1 12345677788877 52 466775 4
Q ss_pred ecChHHHhcHHHHHHh-cCeeEEcCCCCCC--------CCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC
Q psy259 129 IENHQGVKNLDEIIAE-ADGIMVARGDLGI--------EIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 129 IE~~~~v~n~deIl~~-sDgimvaRgDLg~--------e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt 199 (398)
+-+.+-. ....+. +|+|.|+-| -|. ..+.+. ....+.+.+.+...+.|||.+. ..-
T Consensus 202 v~~~~~a---~~a~~~Gad~I~vg~~-~G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~G---------GI~- 266 (404)
T 1eep_A 202 IVTKEAA---LDLISVGADCLKVGIG-PGSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADG---------GIR- 266 (404)
T ss_dssp ECSHHHH---HHHHTTTCSEEEECSS-CSTTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEES---------CCC-
T ss_pred CCcHHHH---HHHHhcCCCEEEECCC-CCcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEEC---------CCC-
Confidence 5554333 223333 899999421 111 011111 1223344444445689998742 222
Q ss_pred chhhhhHHHHHHhCCcEEEec
Q psy259 200 RAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 200 raEvsDVanav~dG~D~vmLS 220 (398)
-..|+..++..|||+|++.
T Consensus 267 --~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 267 --FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp --SHHHHHHHHHHTCSEEEEC
T ss_pred --CHHHHHHHHHcCCCHHhhC
Confidence 2358999999999999993
No 58
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=66.63 E-value=41 Score=31.38 Aligned_cols=157 Identities=17% Similarity=0.114 Sum_probs=83.3
Q ss_pred HHhcHHHHHHh-----cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHH
Q psy259 134 GVKNLDEIIAE-----ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVAN 208 (398)
Q Consensus 134 ~v~n~deIl~~-----sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVan 208 (398)
..++++.+++. .|+|++.+|- ++.|...++++++.--=--+.- .+.|+..-+..+..
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~~-----------------v~~~~~~~~~liv~~~~~~~~~-g~~~~~~~~~~ve~ 100 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRGI-----------------AEKYYDGSVPLILKLNGKTTLY-NGEPVSVANCSVEE 100 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHHH-----------------HHHHCCSSSCEEEECEECCTTC-CSSCCCEESSCHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEECHHH-----------------HHHhhcCCCcEEEEEeCCCCcC-CCCccchHHHHHHH
Confidence 46667666665 6999987552 2222234567555200000111 34567666788999
Q ss_pred HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhhHHHHH-HhhcCCCCC-ChHHHHHHHHHHHHHhcCCcEE
Q psy259 209 AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHTKLLTE-LKSMLPLPI-DSAHSVAIAAVEAASKVFAGAI 286 (398)
Q Consensus 209 av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~-~~~~~~~~~-~~~~~ia~aav~~A~~~~A~aI 286 (398)
|+..|+|+|-+--=--. ....+..+.+.++...+...- ..++-+ ......... ...+.+. .+++.|.+.+|+.|
T Consensus 101 Ai~~Ga~~v~~~~nig~-~~~~~~~~~~~~v~~~~~~~~--~~vIi~~~~~G~~~~~~~s~~~i~-~a~~~a~~~GAD~v 176 (263)
T 1w8s_A 101 AVSLGASAVGYTIYPGS-GFEWKMFEELARIKRDAVKFD--LPLVVESFPRGGKVVNETAPEIVA-YAARIALELGADAM 176 (263)
T ss_dssp HHHTTCSEEEEEECTTS-TTHHHHHHHHHHHHHHHHHHT--CCEEEEECCCSTTCCCTTCHHHHH-HHHHHHHHHTCSEE
T ss_pred HHHCCCCEEEEEEecCC-cCHHHHHHHHHHHHHHHHHcC--CeEEEEeeCCCCccccCCCHHHHH-HHHHHHHHcCCCEE
Confidence 99999999977421112 334556666666666665421 001100 000000000 0234444 34677788999988
Q ss_pred EEECCCc-hHHHHHHhhCCCCCEEEEe
Q psy259 287 VVLTTTG-TSARLISKYRPRCPIISVT 312 (398)
Q Consensus 287 Iv~T~SG-~tA~~iSkyRP~~PIIAVT 312 (398)
-+-++.+ ..-+.+.+.-|.+||++.-
T Consensus 177 kt~~~~~~e~~~~~~~~~~~~pV~asG 203 (263)
T 1w8s_A 177 KIKYTGDPKTFSWAVKVAGKVPVLMSG 203 (263)
T ss_dssp EEECCSSHHHHHHHHHHTTTSCEEEEC
T ss_pred EEcCCCCHHHHHHHHHhCCCCeEEEEe
Confidence 7776422 2334444444666877765
No 59
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=66.61 E-value=12 Score=41.95 Aligned_cols=94 Identities=18% Similarity=0.263 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhhchhcC--CcccEEEeecChHHHhcHHHHHHh--cC-----------eeEEcCCCCCCCCCh----hhH
Q psy259 104 ESNVRLIEKLMATGEQG--KHIKIIAKIENHQGVKNLDEIIAE--AD-----------GIMVARGDLGIEIPP----WKV 164 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~--~~~~iiaKIE~~~~v~n~deIl~~--sD-----------gimvaRgDLg~e~~~----~~v 164 (398)
++||.++--+ ..+.| ..+.|+.=.||.+.++|.++|++. +. -||+|..|=+-+-|. -.+
T Consensus 540 ~sDvL~V~~L--~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~l 617 (970)
T 1jqo_A 540 PSDVLAVELL--QRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQL 617 (970)
T ss_dssp THHHHHHHHH--HHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHH--HHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHH
Confidence 3488888888 77777 468999999999999999999986 22 499999999888886 668
Q ss_pred HHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC
Q psy259 165 FLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 165 ~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt 199 (398)
..+|..+.+.|+++|.++..-=-.=.|.=.-.-|+
T Consensus 618 y~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~ 652 (970)
T 1jqo_A 618 YRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPT 652 (970)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCCh
Confidence 89999999999999998876432223333344454
No 60
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=65.48 E-value=39 Score=31.71 Aligned_cols=135 Identities=16% Similarity=0.202 Sum_probs=82.1
Q ss_pred HHHHHHHHHhcccccccCC-CCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHH
Q psy259 65 VDMLEKIIETESNSDECSE-KPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIA 143 (398)
Q Consensus 65 ~e~l~~~i~~Gmnvr~~~~-~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~ 143 (398)
.+.++++-++|.++-+|.. +|+ +..|..++- .-+..+.+|++ ..+. .+.+++-+-..+.++-+.+.
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkpr---ts~~~~~g~----~~egl~~l~~~--~~~~--Gl~~~te~~d~~~~~~l~~~-- 106 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPR---TSPYSFQGY----GEKALRWMREA--ADEY--GLVTVTEVMDTRHVELVAKY-- 106 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCC---SSTTSCCCC----THHHHHHHHHH--HHHH--TCEEEEECCCGGGHHHHHHH--
T ss_pred HHHHHHHHHcCCCEEEEEecccC---CCcccccCc----cHHHHHHHHHH--HHHc--CCcEEEeeCCHHhHHHHHhh--
Confidence 3455666688988844221 321 223444432 25567788887 6544 58899999888877666554
Q ss_pred hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHHHh-CC-cEEE-e
Q psy259 144 EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAVLD-GA-DCVM-L 219 (398)
Q Consensus 144 ~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav~d-G~-D~vm-L 219 (398)
.|.+-|+-+++. . ..+++.+-+.||||++ +++. +|-.|+-+.+..+.. |. +.++ +
T Consensus 107 -vd~~kIga~~~~------n-----~~ll~~~a~~~kPV~l---------k~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 107 -SDILQIGARNSQ------N-----FELLKEVGKVENPVLL---------KRGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp -CSEEEECGGGTT------C-----HHHHHHHTTSSSCEEE---------ECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred -CCEEEECccccc------C-----HHHHHHHHhcCCcEEE---------ecCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 899999977652 1 1234445568999998 4444 477777777776654 54 4333 3
Q ss_pred cCccCCCCChHHHH
Q psy259 220 SGETAKGDYPVECV 233 (398)
Q Consensus 220 S~ETA~G~yP~eaV 233 (398)
.|=+..-.||.+.|
T Consensus 166 RG~~~~~~y~~~~v 179 (262)
T 1zco_A 166 RGIRTFETATRFTL 179 (262)
T ss_dssp CCBCCSCCSSSSBC
T ss_pred CCCCCCCCcChhhc
Confidence 33233336776543
No 61
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=65.45 E-value=56 Score=30.38 Aligned_cols=93 Identities=24% Similarity=0.233 Sum_probs=54.8
Q ss_pred cHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCc
Q psy259 137 NLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGAD 215 (398)
Q Consensus 137 n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D 215 (398)
.+..+.+. +|.|+.--|+.|..-+... +...+++. .....||++. -..-|. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~---------gGI~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVD---------AGIGSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEE---------SCCCSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEE---------eCCCCH---HHHHHHHHcCCC
Confidence 44555555 6777543445554322211 22222232 2347899873 222222 477888999999
Q ss_pred EEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 216 CVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 216 ~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
+|....--....-|.++++.+.+.+++...
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999975444445688888888877766544
No 62
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=64.87 E-value=26 Score=34.54 Aligned_cols=93 Identities=22% Similarity=0.283 Sum_probs=50.7
Q ss_pred HHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHh-cCeeEEcC-CCCCCCCChhhHHHHHHHHHHHHHHcCCC
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAE-ADGIMVAR-GDLGIEIPPWKVFLAQKQMIAKCNKVGKP 181 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~-sDgimvaR-gDLg~e~~~~~v~~~qk~ii~~c~~~gkp 181 (398)
++|..+|+. . +..|+.| +-++ +......+. +|+|.|.= |-=....+...+ ..-.++.+.+ ....|
T Consensus 219 ~~i~~lr~~--~-----~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v-~~~ip 286 (368)
T 2nli_A 219 RDIEEIAGH--S-----GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERV-NKRVP 286 (368)
T ss_dssp HHHHHHHHH--S-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHH-TTSSC
T ss_pred HHHHHHHHH--c-----CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHh-CCCCe
Confidence 568888887 4 4678888 3222 222333333 89999941 110012222222 1112222221 12589
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
||.. ...=+ -.|+..++..|||+||+..
T Consensus 287 Via~---------GGI~~---g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 287 IVFD---------SGVRR---GEHVAKALASGADVVALGR 314 (368)
T ss_dssp EEEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 9873 22222 3699999999999999963
No 63
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=63.69 E-value=28 Score=33.25 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=61.6
Q ss_pred cccEEE-eecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCc
Q psy259 122 HIKIIA-KIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATR 200 (398)
Q Consensus 122 ~~~iia-KIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptr 200 (398)
...++. -..++.--..+++. =.|.||.-...-|-..+..+ +...+.|++ ..+.|||++ -..=|-
T Consensus 135 Gf~Vlpy~~dd~~~akrl~~~--G~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~e---------GGI~TP 199 (265)
T 1wv2_A 135 GFDVMVYTSDDPIIARQLAEI--GCIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVD---------AGVGTA 199 (265)
T ss_dssp TCEEEEEECSCHHHHHHHHHS--CCSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCSH
T ss_pred CCEEEEEeCCCHHHHHHHHHh--CCCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEe---------CCCCCH
Confidence 466664 55555444443322 27888873223344333333 333355544 468999983 333332
Q ss_pred hhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHH
Q psy259 201 AEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTC 240 (398)
Q Consensus 201 aEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~ 240 (398)
+|++.|...|+|+|++..--+.++.|.+-.+.|..-+
T Consensus 200 ---sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 200 ---SDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAI 236 (265)
T ss_dssp ---HHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 5899999999999999766667889976666555444
No 64
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=63.62 E-value=7.9 Score=36.84 Aligned_cols=129 Identities=16% Similarity=0.281 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHhcccccc----cCCCCCCCCC-C-----CCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEe-ecC
Q psy259 63 VAVDMLEKIIETESNSDE----CSEKPRECPS-E-----PEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAK-IEN 131 (398)
Q Consensus 63 ~~~e~l~~~i~~Gmnvr~----~~~~~~pgp~-~-----~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~ 131 (398)
.+.+.++.|.++|.++-+ ||....-||. . .+... ..---+++-|+++|+- +.+++|+.+ -.|
T Consensus 35 ~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G-~~~~~~~~~v~~~r~~------~~~~Pivlm~Y~n 107 (271)
T 3nav_A 35 QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK-TTPDICFELIAQIRAR------NPETPIGLLMYAN 107 (271)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH------CTTSCEEEEECHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHhc------CCCCCEEEEecCc
Confidence 357779999999999966 6541122772 1 12111 0000112344444442 346677665 233
Q ss_pred h---HHHhcHHHH-HHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 132 H---QGVKNLDEI-IAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 132 ~---~~v~n~deI-l~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
+ -|++++-+- .++ +||++|. || |+|+ .....+.|+++|...|.- -.|.-+.. .+
T Consensus 108 ~v~~~g~~~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I~l--------vap~t~~e---ri 166 (271)
T 3nav_A 108 LVYARGIDDFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPIFI--------APPTASDE---TL 166 (271)
T ss_dssp HHHHTCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEEE--------ECTTCCHH---HH
T ss_pred HHHHHhHHHHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---HH
Confidence 2 366665443 344 8999995 55 5554 456788999999875531 12332222 44
Q ss_pred HHHHHhCCcEEEe
Q psy259 207 ANAVLDGADCVML 219 (398)
Q Consensus 207 anav~dG~D~vmL 219 (398)
......+.+.+-+
T Consensus 167 ~~i~~~~~gfiY~ 179 (271)
T 3nav_A 167 RAVAQLGKGYTYL 179 (271)
T ss_dssp HHHHHHCCSCEEE
T ss_pred HHHHHHCCCeEEE
Confidence 5555567777765
No 65
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=62.53 E-value=17 Score=32.06 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=64.2
Q ss_pred HHHHHHHHhhchhcCCcccE-EEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc--CCC
Q psy259 106 NVRLIEKLMATGEQGKHIKI-IAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKP 181 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~i-iaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkp 181 (398)
++.++.+. +.+.|..+.+ +...++ .++.+..+++. +|.|.+.+|-=|...+...+ ..++..++. +.|
T Consensus 91 ~~~~~~~~--~~~~g~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~-----~~i~~l~~~~~~~~ 161 (211)
T 3f4w_A 91 TIQSCIRA--AKEAGKQVVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAGRKPI-----DDLITMLKVRRKAR 161 (211)
T ss_dssp HHHHHHHH--HHHHTCEEEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTTCCSH-----HHHHHHHHHCSSCE
T ss_pred HHHHHHHH--HHHcCCeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccCCCCH-----HHHHHHHHHcCCCc
Confidence 45566665 5555543322 112233 34567777777 89998876622222221111 112222222 577
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
+++. -.. + ..|+..+...|+|++....---.+..|.++++.+.+.++
T Consensus 162 i~~~---------gGI-~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 162 IAVA---------GGI-S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp EEEE---------SSC-C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred EEEE---------CCC-C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 7763 112 2 247788888899999997655566789888887766544
No 66
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=62.38 E-value=24 Score=39.34 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=55.3
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-----cCeeEEc-----------------------CCCCCC
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-----ADGIMVA-----------------------RGDLGI 157 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-----sDgimva-----------------------RgDLg~ 157 (398)
.|..+|+. . ++.|+.|+= + .+.++.++... +|+|.+. |...+-
T Consensus 694 iv~~v~~~--~-----~~Pv~vK~~-~-~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg 764 (1025)
T 1gte_A 694 ICRWVRQA--V-----QIPFFAKLT-P-NVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGG 764 (1025)
T ss_dssp HHHHHHHH--C-----SSCEEEEEC-S-CSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEE
T ss_pred HHHHHHHh--h-----CCceEEEeC-C-ChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCC
Confidence 55666665 3 578999983 2 34455565554 7999992 111111
Q ss_pred CCChhhHHHHHHHHHHHHHHc-CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 158 EIPPWKVFLAQKQMIAKCNKV-GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 158 e~~~~~v~~~qk~ii~~c~~~-gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
--+....+..-..+-+..+.. +.|+|.. -..=| ..|+..++..|+|+||+..
T Consensus 765 ~sg~~~~~~~~~~v~~v~~~~~~ipvi~~---------GGI~s---~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 765 VSGTAIRPIALRAVTTIARALPGFPILAT---------GGIDS---AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp EESGGGHHHHHHHHHHHHHHSTTCCEEEE---------SSCCS---HHHHHHHHHTTCSEEEESH
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEe---------cCcCC---HHHHHHHHHcCCCEEEEee
Confidence 112233333333333333444 7899863 23333 3588999999999999953
No 67
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=62.22 E-value=49 Score=30.92 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=78.6
Q ss_pred cceeEEEeCCCCCCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeec
Q psy259 51 LTGIICTIGPASVAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIE 130 (398)
Q Consensus 51 ~t~Iictigp~~~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE 130 (398)
+.++|+.+.| .+..+.+.++|...-.+..+ .| .+.-...+....-..+.|.++|+. . +++++.++-
T Consensus 21 ~~~~i~~~~~----~~~a~~~~~~Ga~~i~~~e~-v~--~~~~~~~G~~~~~~~~~i~~i~~~--~-----~~Pvi~~~~ 86 (297)
T 2zbt_A 21 KGGVIMDVTT----PEQAVIAEEAGAVAVMALER-VP--ADIRAQGGVARMSDPKIIKEIMAA--V-----SIPVMAKVR 86 (297)
T ss_dssp TTEEEEEESS----HHHHHHHHHHTCSEEEECSS-CH--HHHHHTTCCCCCCCHHHHHHHHTT--C-----SSCEEEEEE
T ss_pred hCCeeeeech----HHHHHHHHHCCCcEEEeccc-cc--hHHHhhcCCccCCCHHHHHHHHHh--c-----CCCeEEEec
Confidence 5678888866 89999999999655221111 00 000000011111223445555554 2 456665442
Q ss_pred ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 131 NHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 131 ~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
.- -.+.++..++. +|+| |.....+.++ +++.+++. +.++++-+ ..|. +..
T Consensus 87 ~~-~~~~~~~~~~aGad~v-----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v---------~~~~-----~~~ 139 (297)
T 2zbt_A 87 IG-HFVEAMILEAIGVDFI-----DESEVLTPAD-------EEHHIDKWKFKVPFVCGA---------RNLG-----EAL 139 (297)
T ss_dssp TT-CHHHHHHHHHTTCSEE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE---------SSHH-----HHH
T ss_pred cC-CHHHHHHHHHCCCCEE-----eeeCCCChHH-------HHHHHHHhCCCceEEeec---------CCHH-----HHH
Confidence 21 14455666666 8999 2222122111 22233333 66666311 1122 345
Q ss_pred HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 208 NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
.+...|+|.|...||...| -..++..-++++..
T Consensus 140 ~a~~~Gad~I~v~G~~~~g-~~~e~~~~~~~~~~ 172 (297)
T 2zbt_A 140 RRIAEGAAMIRTKGEAGTG-NVVEAVRHARTMWK 172 (297)
T ss_dssp HHHHTTCSEEEECCCSSSC-CTHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcccccCc-chHHHHhhHHHHHH
Confidence 6788999999999998888 55677766655553
No 68
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=61.53 E-value=66 Score=30.44 Aligned_cols=124 Identities=10% Similarity=-0.014 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCch-hhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRA-EISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIW 248 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~Ptra-EvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 248 (398)
-+...|+..|.|+++- | |..+ ...-+...-..|++.+...++... .++.++.+...+++++-...++
T Consensus 86 alA~~a~~~G~~~~iv------~-----p~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~~ 153 (325)
T 1j0a_A 86 VTGLAAKKLGLDAILV------L-----RGKEELKGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPYV 153 (325)
T ss_dssp HHHHHHHHTTCEEEEE------E-----ESCCCSCHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEEE
T ss_pred HHHHHHHHhCCcEEEE------E-----CCCCCCCchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceEE
Confidence 4567889999998874 1 2222 223345666789998877654321 1123444444443321111111
Q ss_pred hhHHHHHHhhcCCCCCChH--HHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 249 HTKLLTELKSMLPLPIDSA--HSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~--~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
+..-| .++. +.....+.++..++ ..++||+..-+|.|+.-+++ ++|.+.|++|-+..
T Consensus 154 ~p~~~----------~n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~ 218 (325)
T 1j0a_A 154 IPPGG----------ASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGR 218 (325)
T ss_dssp ECGGG----------CSHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSS
T ss_pred EcCCC----------CCHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecC
Confidence 10000 1111 12233456777776 47999999999999866554 57999999998854
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=60.51 E-value=50 Score=33.67 Aligned_cols=97 Identities=26% Similarity=0.249 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhchhcCCcccEE-EeecChHHHhcHHHHHHhcCeeEEcCCCCCC-------CCChhhHHHHHHHHHHHH
Q psy259 104 ESNVRLIEKLMATGEQGKHIKII-AKIENHQGVKNLDEIIAEADGIMVARGDLGI-------EIPPWKVFLAQKQMIAKC 175 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~~~~ii-aKIE~~~~v~n~deIl~~sDgimvaRgDLg~-------e~~~~~v~~~qk~ii~~c 175 (398)
++.+..+|+. .. .++.+| ..+.+.+..+.+.+ .-+|+|.|+.|-=+. .++.+. ..+...+.+.|
T Consensus 271 ~~~i~~lk~~--~~---~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~~~~r~~~~~g~p~-~~~l~~v~~~~ 342 (503)
T 1me8_A 271 KITIGWIREK--YG---DKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICITREQKGIGRGQ-ATAVIDVVAER 342 (503)
T ss_dssp HHHHHHHHHH--HG---GGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCCSTTTTCCCCCH-HHHHHHHHHHH
T ss_pred hhHHHHHHHh--CC---CCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcCcccccccCCCCch-HHHHHHHHHHH
Confidence 3455555555 31 115555 46888776655432 238999987643111 111222 23445667777
Q ss_pred HHc------CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 176 NKV------GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 176 ~~~------gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
++. +.|||.+-- .-| -.||+.|+..|||+||+.
T Consensus 343 ~~~~~~~~~~ipvia~GG---------i~~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 343 NKYFEETGIYIPVCSDGG---------IVY---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp HHHHHHHSEECCEEEESC---------CCS---HHHHHHHHHTTCSEEEES
T ss_pred HHHhhhcCCCceEEEeCC---------CCC---HHHHHHHHHcCCCEEEEC
Confidence 776 899997432 222 369999999999999996
No 70
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=60.43 E-value=36 Score=31.78 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=57.0
Q ss_pred cccEEEeecChHHH----------hcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhH
Q psy259 122 HIKIIAKIENHQGV----------KNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLE 190 (398)
Q Consensus 122 ~~~iiaKIE~~~~v----------~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLe 190 (398)
++.++.|+++..++ ...++.++. +|+|-+ |-+++ +-....+...-+++.+.|+++|.|+|+-
T Consensus 72 ~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~----- 144 (263)
T 1w8s_A 72 SVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASAVGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVE----- 144 (263)
T ss_dssp SSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSEEEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEE-----
T ss_pred CCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCEEEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEE-----
Confidence 45666666554444 446666666 788755 34444 2234667777788999999999999862
Q ss_pred HhhcCCCC---------CchhhhhH-HHHHHhCCcEEEec
Q psy259 191 SMIKKPRA---------TRAEISDV-ANAVLDGADCVMLS 220 (398)
Q Consensus 191 SMi~~~~P---------traEvsDV-anav~dG~D~vmLS 220 (398)
..| +..++... --|...|+|.|=.|
T Consensus 145 -----~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 145 -----SFPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp -----ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred -----eeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 122 43455442 45677899999887
No 71
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=60.14 E-value=61 Score=30.35 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=73.8
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCC---------CCChhhHHHHHHHHHHHHH
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGI---------EIPPWKVFLAQKQMIAKCN 176 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~---------e~~~~~v~~~qk~ii~~c~ 176 (398)
...+|.+ .. . .++++.+-+-+. +.++..++. .|.|+|. ++. ..+.++....-+.+++.|+
T Consensus 61 ~e~~~~i--~~-~-~~~~v~~l~~n~---~~i~~a~~~G~~~V~i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~ 130 (295)
T 1ydn_A 61 REVMAGI--RR-A-DGVRYSVLVPNM---KGYEAAAAAHADEIAVF---ISASEGFSKANINCTIAESIERLSPVIGAAI 130 (295)
T ss_dssp HHHHHHS--CC-C-SSSEEEEECSSH---HHHHHHHHTTCSEEEEE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--Hh-C-CCCEEEEEeCCH---HHHHHHHHCCCCEEEEE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 3455655 32 2 356665555443 334444444 7888885 222 3577888888899999999
Q ss_pred HcCCCEE--EeehhhHHhhcCC---CCCchhhhhHHH-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 177 KVGKPVI--CATQMLESMIKKP---RATRAEISDVAN-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 177 ~~gkpvi--~ATQmLeSMi~~~---~PtraEvsDVan-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
++|++|- +.|- ..++ +-+..++-+++. +..-|+|.+.|. .|.=...|.+.-+.+..+.+.
T Consensus 131 ~~G~~V~~~l~~~-----~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 131 NDGLAIRGYVSCV-----VECPYDGPVTPQAVASVTEQLFSLGCHEVSLG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp HTTCEEEEEEECS-----SEETTTEECCHHHHHHHHHHHHHHTCSEEEEE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred HcCCeEEEEEEEE-----ecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec-CCCCCcCHHHHHHHHHHHHHh
Confidence 9999985 2211 1111 223344555554 335799999998 455456788877777766543
No 72
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=59.60 E-value=97 Score=29.50 Aligned_cols=122 Identities=14% Similarity=0.099 Sum_probs=68.3
Q ss_pred CCcccHHHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy259 99 EPNLYESNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK 177 (398)
Q Consensus 99 ~~~~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~ 177 (398)
.++++.|-+..++....|-+.| ..++.. -.+++-.+.+++ .-.|.||.-....|-..|... +...+.+++. .
T Consensus 103 ~~~l~pD~~~tv~aa~~L~k~G--f~Vlpy~~~D~~~ak~l~~--~G~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~ 175 (268)
T 2htm_A 103 PTYLLPDPLETLKAAERLIEED--FLVLPYMGPDLVLAKRLAA--LGTATVMPLAAPIGSGWGVRT-RALLELFARE--K 175 (268)
T ss_dssp TTTTCCCHHHHHHHHHHHHHTT--CEECCEECSCHHHHHHHHH--HTCSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--T
T ss_pred ccccCcCHHHHHHHHHHHHHCC--CEEeeccCCCHHHHHHHHh--cCCCEEEecCccCcCCcccCC-HHHHHHHHHh--c
Confidence 4556666344444332233334 334422 255554455555 237888874343444444433 2233333221 1
Q ss_pred cC-CCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHH
Q psy259 178 VG-KPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNT 239 (398)
Q Consensus 178 ~g-kpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I 239 (398)
.. .|||++ -..-|- +|++.|...|+|+|++..--+.++.|.+-.+.|..-
T Consensus 176 ~~~vPVI~~---------GGI~tp---sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~A 226 (268)
T 2htm_A 176 ASLPPVVVD---------AGLGLP---SHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLA 226 (268)
T ss_dssp TTSSCBEEE---------SCCCSH---HHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHH
T ss_pred CCCCeEEEe---------CCCCCH---HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 34 799984 333332 589999999999999977777888897655555443
No 73
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=59.09 E-value=28 Score=31.88 Aligned_cols=119 Identities=9% Similarity=0.040 Sum_probs=67.2
Q ss_pred ccceeEEEeCCC--CCCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE
Q psy259 50 RLTGIICTIGPA--SVAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA 127 (398)
Q Consensus 50 r~t~Iictigp~--~~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia 127 (398)
+..+|+.=+... ..-++.++++++.|..+-++..+ .. -..+-++++++. + .+..+-+
T Consensus 24 ~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k------------~~---~~~~~i~~l~~~--~----~~~~iga 82 (225)
T 1mxs_A 24 EKARILPVITIAREEDILPLADALAAGGIRTLEVTLR------------SQ---HGLKAIQVLREQ--R----PELCVGA 82 (225)
T ss_dssp HHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESS------------ST---HHHHHHHHHHHH--C----TTSEEEE
T ss_pred HHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecC------------Cc---cHHHHHHHHHHh--C----cccEEee
Confidence 445566644222 23467899999999766443222 11 111123444444 3 2333333
Q ss_pred eecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 128 KIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 128 KIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
-. .---+..+.-+++ +|+|+.+--| ..+++.|++.|.|.+.- ...| +++
T Consensus 83 gt--vl~~d~~~~A~~aGAd~v~~p~~d--------------~~v~~~~~~~g~~~i~G---------~~t~-----~e~ 132 (225)
T 1mxs_A 83 GT--VLDRSMFAAVEAAGAQFVVTPGIT--------------EDILEAGVDSEIPLLPG---------ISTP-----SEI 132 (225)
T ss_dssp EC--CCSHHHHHHHHHHTCSSEECSSCC--------------HHHHHHHHHCSSCEECE---------ECSH-----HHH
T ss_pred Ce--EeeHHHHHHHHHCCCCEEEeCCCC--------------HHHHHHHHHhCCCEEEe---------eCCH-----HHH
Confidence 22 1111455555555 8999855222 25788999999998842 1123 456
Q ss_pred HHHHHhCCcEEEe
Q psy259 207 ANAVLDGADCVML 219 (398)
Q Consensus 207 anav~dG~D~vmL 219 (398)
..|...|+|.|.+
T Consensus 133 ~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 133 MMGYALGYRRFKL 145 (225)
T ss_dssp HHHHTTTCCEEEE
T ss_pred HHHHHCCCCEEEE
Confidence 8899999999999
No 74
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=58.45 E-value=17 Score=32.81 Aligned_cols=118 Identities=11% Similarity=0.079 Sum_probs=67.8
Q ss_pred cccceeEEEeCCCC--CCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEE
Q psy259 49 VRLTGIICTIGPAS--VAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKII 126 (398)
Q Consensus 49 ~r~t~Iictigp~~--~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~ii 126 (398)
.+.++||.-+.-.+ .-++..+++++.|..+-++. +|+.. ....++.+ .. .+..+-
T Consensus 10 l~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~------------~k~~~------~~~~i~~~--~~---~~~~~g 66 (207)
T 2yw3_A 10 LAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEIT------------LRTEK------GLEALKAL--RK---SGLLLG 66 (207)
T ss_dssp HHHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEE------------CSSTH------HHHHHHHH--TT---SSCEEE
T ss_pred HHhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEe------------CCChH------HHHHHHHH--hC---CCCEEE
Confidence 34566776553322 33678899999996654332 22211 12334443 22 233333
Q ss_pred EeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhh
Q psy259 127 AKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISD 205 (398)
Q Consensus 127 aKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsD 205 (398)
+-. .---+..+.-++. +|++..+..|. .+++.|++.|.|++.- .-| .++
T Consensus 67 ag~--vl~~d~~~~A~~~GAd~v~~~~~d~--------------~v~~~~~~~g~~~i~G-----------~~t---~~e 116 (207)
T 2yw3_A 67 AGT--VRSPKEAEAALEAGAAFLVSPGLLE--------------EVAALAQARGVPYLPG-----------VLT---PTE 116 (207)
T ss_dssp EES--CCSHHHHHHHHHHTCSEEEESSCCH--------------HHHHHHHHHTCCEEEE-----------ECS---HHH
T ss_pred eCe--EeeHHHHHHHHHcCCCEEEcCCCCH--------------HHHHHHHHhCCCEEec-----------CCC---HHH
Confidence 322 1112556666666 89998653221 4678899999998852 112 345
Q ss_pred HHHHHHhCCcEEEe
Q psy259 206 VANAVLDGADCVML 219 (398)
Q Consensus 206 Vanav~dG~D~vmL 219 (398)
+..|...|+|.|.+
T Consensus 117 ~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 117 VERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 68889999999988
No 75
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=58.34 E-value=7.9 Score=37.68 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=56.4
Q ss_pred cccEEEeecC--------hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHh
Q psy259 122 HIKIIAKIEN--------HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESM 192 (398)
Q Consensus 122 ~~~iiaKIE~--------~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSM 192 (398)
.+.|+++.|. .+-.+.++.++.. .-.|+++|||+. ++ .+++.|++.|.|++. |
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~----pe-------elie~A~~~~IPVL~-T------ 110 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP----PE-------ELIEAAKEHETPLIT-S------ 110 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC----CH-------HHHHHHHHTTCCEEE-C------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC----CH-------HHHHHHHHCCCeEEE-E------
Confidence 4566665554 2233455666543 789999999983 23 378899999999985 2
Q ss_pred hcCCCCCchhhhhHHHHHHh---------------CCcEEEecCccCCCC
Q psy259 193 IKKPRATRAEISDVANAVLD---------------GADCVMLSGETAKGD 227 (398)
Q Consensus 193 i~~~~PtraEvsDVanav~d---------------G~D~vmLS~ETA~G~ 227 (398)
+.+|-.=++.+.+.+.. +--++++.|++..||
T Consensus 111 ---~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 111 ---KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ---CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ---CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 33443334455566554 225899999999998
No 76
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=58.28 E-value=35 Score=31.32 Aligned_cols=146 Identities=16% Similarity=0.087 Sum_probs=0.0
Q ss_pred HHhcHHHHHHh-----cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 134 GVKNLDEIIAE-----ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 134 ~v~n~deIl~~-----sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
+.++++++++. .++|+|-+| .++.|++. |.++.++|-. +.=....++..-+..+
T Consensus 17 t~~~i~~l~~~a~~~~~~aVcv~p~-----------------~v~~~~~~l~~~~v~v~~vi--gFP~G~~~~~~k~~e~ 77 (220)
T 1ub3_A 17 TLEEVAKAAEEALEYGFYGLCIPPS-----------------YVAWVRARYPHAPFRLVTVV--GFPLGYQEKEVKALEA 77 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCGG-----------------GHHHHHHHCTTCSSEEEEEE--STTTCCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECHH-----------------HHHHHHHHhCCCCceEEEEe--cCCCCCCchHHHHHHH
Q ss_pred HHHHHhCCcEEEecCccC---CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCC
Q psy259 207 ANAVLDGADCVMLSGETA---KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFA 283 (398)
Q Consensus 207 anav~dG~D~vmLS~ETA---~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A 283 (398)
..|+.+|||.|-.----. .|+| -+..+-+..++..+....-.- .-......+.--..|++++.+.+|
T Consensus 78 ~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~~lkv---------Ilet~~l~~e~i~~a~~ia~eaGA 147 (220)
T 1ub3_A 78 ALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQAVLKV---------ILETGYFSPEEIARLAEAAIRGGA 147 (220)
T ss_dssp HHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTSEEEE---------ECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCCCceE---------EEecCCCCHHHHHHHHHHHHHhCC
Q ss_pred cEEEEECCCchH---------HHHHHhhCCCCCEEE
Q psy259 284 GAIVVLTTTGTS---------ARLISKYRPRCPIIS 310 (398)
Q Consensus 284 ~aIIv~T~SG~t---------A~~iSkyRP~~PIIA 310 (398)
+ +|=|.||.+ ..+..--.+++||.+
T Consensus 148 D--fVKTsTGf~~~gat~~dv~~m~~~vg~~v~Vka 181 (220)
T 1ub3_A 148 D--FLKTSTGFGPRGASLEDVALLVRVAQGRAQVKA 181 (220)
T ss_dssp S--EEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEE
T ss_pred C--EEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEE
No 77
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=57.98 E-value=32 Score=32.20 Aligned_cols=109 Identities=10% Similarity=0.110 Sum_probs=63.5
Q ss_pred chhcCCcccEEEeecChHHHhcHHHHHHhcCeeEE---cCCCCCCCCChhhHHHHHHHHHHHHHHcCC--CEEEeehhhH
Q psy259 116 TGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMV---ARGDLGIEIPPWKVFLAQKQMIAKCNKVGK--PVICATQMLE 190 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimv---aRgDLg~e~~~~~v~~~qk~ii~~c~~~gk--pvi~ATQmLe 190 (398)
+.+.|.++.+.-.=.| .++.++++++..|.|++ -+| +|-.-=.+....-.+++-+.+.+.|. ++-+.
T Consensus 130 ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PG-fgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VD----- 201 (246)
T 3inp_A 130 IKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPG-FGGQKFIPAMLDKAKEISKWISSTDRDILLEID----- 201 (246)
T ss_dssp HHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTT-C--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEE-----
T ss_pred HHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCC-CCCcccchHHHHHHHHHHHHHHhcCCCeeEEEE-----
Confidence 3444666666544344 56888899999999986 344 33221113333334455555555553 33332
Q ss_pred HhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHH
Q psy259 191 SMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTC 240 (398)
Q Consensus 191 SMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~ 240 (398)
-.-.|.. +..++..|||.+...+---...-|.++++.+++.+
T Consensus 202 ---GGI~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 202 ---GGVNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp ---SSCCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred ---CCcCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 2233433 47788889999988633223467889888887654
No 78
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=57.70 E-value=27 Score=33.67 Aligned_cols=95 Identities=22% Similarity=0.260 Sum_probs=53.7
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEe-ecChHHHhcHHHHHHh-cCeeEEcC--C-------CCCCCCChhhHHHHHHH
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAK-IENHQGVKNLDEIIAE-ADGIMVAR--G-------DLGIEIPPWKVFLAQKQ 170 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaK-IE~~~~v~n~deIl~~-sDgimvaR--g-------DLg~e~~~~~v~~~qk~ 170 (398)
.+.++|+.+|+. .. .+.|+.. |-+.+ ......+. +|+|.++- | ..+...|.- ....
T Consensus 135 ~~~~~i~~lr~~--~~----~~~vi~G~v~s~e---~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~----~~~~ 201 (336)
T 1ypf_A 135 AVINMIQHIKKH--LP----ESFVIAGNVGTPE---AVRELENAGADATKVGIGPGKVCITKIKTGFGTGGW----QLAA 201 (336)
T ss_dssp HHHHHHHHHHHH--CT----TSEEEEEEECSHH---HHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTC----HHHH
T ss_pred HHHHHHHHHHHh--CC----CCEEEECCcCCHH---HHHHHHHcCCCEEEEecCCCceeecccccCcCCchh----HHHH
Confidence 345577778777 42 3556654 54443 33344444 89999941 1 011122200 1122
Q ss_pred HHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 171 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 171 ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+.+.++..+.|||.+.- .- -.+||..|+..|||+||+..
T Consensus 202 l~~v~~~~~ipVIa~GG---------I~---~g~Dv~kalalGAdaV~iGr 240 (336)
T 1ypf_A 202 LRWCAKAASKPIIADGG---------IR---TNGDVAKSIRFGATMVMIGS 240 (336)
T ss_dssp HHHHHHTCSSCEEEESC---------CC---STHHHHHHHHTTCSEEEESG
T ss_pred HHHHHHHcCCcEEEeCC---------CC---CHHHHHHHHHcCCCEEEeCh
Confidence 33334445899997422 22 24699999999999999953
No 79
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=57.24 E-value=17 Score=29.23 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEE
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISV 311 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAV 311 (398)
+...++.|.+.+++.||+-++. |.++..+.+.-| ||++.|
T Consensus 99 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 99 SRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 4445677888899999887753 778888888776 999875
No 80
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=57.00 E-value=26 Score=35.86 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=74.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...++.... .+-.+++...+++++....++.
T Consensus 127 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAYD-SPEGLIYVAQQLQRETPNSIVL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCTT-STTSHHHHHHHHHHHSSSEECC
T ss_pred HHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCcc-cHHHHHHHHHHHHHhCCCcEec
Confidence 3556788999999874 244444455666777899988776542211 1333455555554433222211
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
.+ |. .+.++..--...+.++..++ ..++||+.+=+|.+..-+++ ..|.+.|++|.+...
T Consensus 195 ~~-~~-------n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 195 DQ-YR-------NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred CC-CC-------CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 11 11 01111111223455676666 37999999999998766655 479999999987554
No 81
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=56.76 E-value=59 Score=30.97 Aligned_cols=122 Identities=11% Similarity=0.045 Sum_probs=73.1
Q ss_pred HHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhh
Q psy259 168 QKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAI 247 (398)
Q Consensus 168 qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~ 247 (398)
=.-+...|+..|.++++- .|..+...-+...-..|++.+...++ +.| -++++...+++++-...+
T Consensus 85 g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~l~~~~~~~~ 149 (325)
T 3dwg_A 85 GISLAMAARLKGYRLICV-----------MPENTSVERRQLLELYGAQIIFSAAE---GGS-NTAVATAKELAATNPSWV 149 (325)
T ss_dssp HHHHHHHHHHHTCEEEEE-----------EESSSCHHHHHHHHHHTCEEEEECST---TTH-HHHHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCeE
Confidence 345677889999999874 23333334456666789998877643 222 456655554443222111
Q ss_pred hhhHHHHHHhhcCCCCCChHH---HHHHHHHHHHHhc-CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 248 WHTKLLTELKSMLPLPIDSAH---SVAIAAVEAASKV-FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~---~ia~aav~~A~~~-~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
+-.+ | .++.. -....+.++..++ +.++||+.+=+|.|..-+++ ..|.+.|++|.+..
T Consensus 150 ~~~~-~----------~np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 150 MLYQ-Y----------GNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp CCCT-T----------TCHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred eCCC-C----------CCHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 1111 1 12211 1223445666665 48999999999998765554 48999999998744
No 82
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=56.57 E-value=20 Score=35.86 Aligned_cols=90 Identities=16% Similarity=0.329 Sum_probs=64.0
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
+....++++ ..+. .+.+++-+-+.+.++-+.+ .+|.+-|+-+++.- ..+++.+.+.||||++
T Consensus 193 egl~~L~~~--~~~~--Gl~~~te~~d~~~~~~l~~---~vd~lkIgs~~~~n-----------~~LL~~~a~~gkPVil 254 (385)
T 3nvt_A 193 EGLKILKRV--SDEY--GLGVISEIVTPADIEVALD---YVDVIQIGARNMQN-----------FELLKAAGRVDKPILL 254 (385)
T ss_dssp HHHHHHHHH--HHHH--TCEEEEECCSGGGHHHHTT---TCSEEEECGGGTTC-----------HHHHHHHHTSSSCEEE
T ss_pred HHHHHHHHH--HHHc--CCEEEEecCCHHHHHHHHh---hCCEEEECcccccC-----------HHHHHHHHccCCcEEE
Confidence 455666666 4443 5889999988877766654 59999999776622 2466777889999998
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHh-CCcEEEec
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLD-GADCVMLS 220 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~d-G~D~vmLS 220 (398)
.|-| ..|-.|+-..+..+.. |.+=++|.
T Consensus 255 k~G~--------~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 255 KRGL--------SATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp ECCT--------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred ecCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 5443 2778888888888865 66555554
No 83
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=56.54 E-value=49 Score=32.65 Aligned_cols=92 Identities=16% Similarity=0.073 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHhhchhcCCcccEEEee----cChHHHhcHHHHHHh-cCeeEEcCCCCCC--------------------
Q psy259 103 YESNVRLIEKLMATGEQGKHIKIIAKI----ENHQGVKNLDEIIAE-ADGIMVARGDLGI-------------------- 157 (398)
Q Consensus 103 ~vddV~~ir~~~~l~~~~~~~~iiaKI----E~~~~v~n~deIl~~-sDgimvaRgDLg~-------------------- 157 (398)
|+++|+++|+. + +++|+.|. -+++ ......+. +|+|.|+ |--|.
T Consensus 175 ~~~~i~~i~~~--~-----~vPVivK~vG~g~s~~---~A~~l~~aGad~I~V~-g~GGt~~~~iE~~R~~~~~~~~~~~ 243 (368)
T 3vkj_A 175 ALEKLRDISKE--L-----SVPIIVKESGNGISME---TAKLLYSYGIKNFDTS-GQGGTNWIAIEMIRDIRRGNWKAES 243 (368)
T ss_dssp HHHHHHHHHTT--C-----SSCEEEECSSSCCCHH---HHHHHHHTTCCEEECC-CBTSBCHHHHHHHHHHHTTCTHHHH
T ss_pred HHHHHHHHHHH--c-----CCCEEEEeCCCCCCHH---HHHHHHhCCCCEEEEe-CCCCCcccchhhhhcccccccchhh
Confidence 77788888876 4 58899993 1332 23333344 8999995 21221
Q ss_pred -----CCChhhHHHHHHHHHHHHHHc-CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 158 -----EIPPWKVFLAQKQMIAKCNKV-GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 158 -----e~~~~~v~~~qk~ii~~c~~~-gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
+++.+.. ..+.+..... ..|+|.. ...-+ ..|++.|+..|||+||+..
T Consensus 244 ~~~~~~~g~pt~----~~l~~v~~~~~~ipvia~---------GGI~~---~~d~~kal~lGA~~v~ig~ 297 (368)
T 3vkj_A 244 AKNFLDWGVPTA----ASIMEVRYSVPDSFLVGS---------GGIRS---GLDAAKAIALGADIAGMAL 297 (368)
T ss_dssp HHHTTTCSCBHH----HHHHHHHHHSTTCEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECH
T ss_pred ccccccccccHH----HHHHHHHHHcCCCcEEEE---------CCCCC---HHHHHHHHHcCCCEEEEcH
Confidence 0011111 1122222233 3788863 23333 3699999999999999974
No 84
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=56.49 E-value=8.8 Score=33.98 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=43.0
Q ss_pred CcccHH----HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHH-HHHHHHHHH
Q psy259 100 PNLYES----NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVF-LAQKQMIAK 174 (398)
Q Consensus 100 ~~~~vd----dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~-~~qk~ii~~ 174 (398)
+++-|| ++..+.+. |.+.|.++.|+. +.++| +.+|||++ +|-- -+...+. .....+++.
T Consensus 4 ~I~iiD~g~~n~~si~~a--l~~~G~~~~v~~---------~~~~l-~~~D~lil-PG~g---~~~~~~~~~~~~~~i~~ 67 (211)
T 4gud_A 4 NVVIIDTGCANISSVKFA--IERLGYAVTISR---------DPQVV-LAADKLFL-PGVG---TASEAMKNLTERDLIEL 67 (211)
T ss_dssp CEEEECCCCTTHHHHHHH--HHHTTCCEEEEC---------CHHHH-HHCSEEEE-CCCS---CHHHHHHHHHHTTCHHH
T ss_pred EEEEEECCCChHHHHHHH--HHHCCCEEEEEC---------CHHHH-hCCCEEEE-CCCC---CHHHHHHHHHhcChHHH
Confidence 455566 67778887 877787777642 33443 56899999 4521 1112221 122346778
Q ss_pred HHHcCCCEEEe
Q psy259 175 CNKVGKPVICA 185 (398)
Q Consensus 175 c~~~gkpvi~A 185 (398)
..+.|||+.--
T Consensus 68 ~~~~~~PvlGI 78 (211)
T 4gud_A 68 VKRVEKPLLGI 78 (211)
T ss_dssp HHHCCSCEEEE
T ss_pred HHHcCCCEEEE
Confidence 88999999743
No 85
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=56.11 E-value=53 Score=32.45 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=90.2
Q ss_pred cceeEEEeCCCCC-CHHHHHHHHH----hccc-----cccc---CCCC-----CCCCC--CCCCCCCCCCcccHHHHHHH
Q psy259 51 LTGIICTIGPASV-AVDMLEKIIE----TESN-----SDEC---SEKP-----RECPS--EPEPPHCKEPNLYESNVRLI 110 (398)
Q Consensus 51 ~t~Iictigp~~~-~~e~l~~~i~----~Gmn-----vr~~---~~~~-----~pgp~--~~~~~k~~~~~~~vddV~~i 110 (398)
++=||+=||-.-+ |.|.-++||+ +|.+ ...| ..+. +.|.+ +.| ++-.+--+-.++..++
T Consensus 5 ~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~-~~~~~~el~~e~~~~L 83 (350)
T 3g8r_A 5 KPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYV-KRFEETRLQPEQMQKL 83 (350)
T ss_dssp CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSH-HHHHHTCCCHHHHHHH
T ss_pred CCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHH-HHHHHhcCCHHHHHHH
Confidence 4668888886644 7787777775 5764 3112 1110 11111 110 0000000113356666
Q ss_pred HHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhh
Q psy259 111 EKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQML 189 (398)
Q Consensus 111 r~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmL 189 (398)
++. ..+. .+.+++-.=..++++-+ .+. .|.+=||-+|+ ...+ +++++-+.|||||+.|-|
T Consensus 84 ~~~--~~~~--Gi~~~st~fD~~svd~l---~~~~v~~~KI~S~~~------~N~p-----LL~~va~~gKPviLstGm- 144 (350)
T 3g8r_A 84 VAE--MKAN--GFKAICTPFDEESVDLI---EAHGIEIIKIASCSF------TDWP-----LLERIARSDKPVVASTAG- 144 (350)
T ss_dssp HHH--HHHT--TCEEEEEECSHHHHHHH---HHTTCCEEEECSSST------TCHH-----HHHHHHTSCSCEEEECTT-
T ss_pred HHH--HHHc--CCcEEeccCCHHHHHHH---HHcCCCEEEECcccc------cCHH-----HHHHHHhhCCcEEEECCC-
Confidence 666 4443 58899977777776655 445 89999999987 2222 455667899999998775
Q ss_pred HHhhcCCCCCchhhhhHHHHHHh-CCcEEEecCccCCCCCh
Q psy259 190 ESMIKKPRATRAEISDVANAVLD-GADCVMLSGETAKGDYP 229 (398)
Q Consensus 190 eSMi~~~~PtraEvsDVanav~d-G~D~vmLS~ETA~G~yP 229 (398)
-|-.|+...++.+.. |.+.++|-.++. ||
T Consensus 145 --------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 145 --------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp --------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred --------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 377899998888875 678777755553 66
No 86
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=55.25 E-value=28 Score=27.79 Aligned_cols=40 Identities=30% Similarity=0.363 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEE
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISV 311 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAV 311 (398)
+...++.|.+.+++.||+-+.. |.++..+.+.- +||++.|
T Consensus 88 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 88 AEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 4455678888899999998763 67888888875 5999976
No 87
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=54.84 E-value=21 Score=28.86 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCCcEEEEECCC--------chHHHHHHhhCCCCCEEEEeCCh
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT--------GTSARLISKYRPRCPIISVTRFP 315 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S--------G~tA~~iSkyRP~~PIIAVT~n~ 315 (398)
+...++.|.+.+++.||+-++. |.++..+.+.-| ||++.|-+.+
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~~ 149 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLRD 149 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCCC
Confidence 3455677888899998887652 566777777665 9999986653
No 88
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=54.79 E-value=86 Score=29.26 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.++++- .|..+...-+...-..|++.+...++. .| -++.+...+++.+ +..++-
T Consensus 76 a~A~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~~~---~~-~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILT-----------MPAQMSEERKRVLKAFGAELVLTDPER---RM-LAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTTT---HH-HHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEE-----------eCCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHhc-CCCEeC
Confidence 3566788999999874 222222344566677899988876432 13 3566555555443 221110
Q ss_pred hHHHHHHhhcCCCCCChHHHH---HHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAHSV---AIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~i---a~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
..-.++.... ...+.++..+++ .++|++.+=+|.++.-+++ ..|...|++|.+...
T Consensus 140 -----------~~~~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 140 -----------DQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp -----------CTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred -----------CCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 0011222211 223567777764 7999999999999766654 469999999987543
No 89
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=54.56 E-value=15 Score=33.43 Aligned_cols=120 Identities=13% Similarity=0.075 Sum_probs=69.2
Q ss_pred cccceeEEEeCCCC--CCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEE
Q psy259 49 VRLTGIICTIGPAS--VAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKII 126 (398)
Q Consensus 49 ~r~t~Iictigp~~--~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~ii 126 (398)
.+..++|.=+-..+ .-.+.++++++.|.++-++..+ ... ..+-++++++. +. +..+-
T Consensus 13 l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k------------~~~---~~~~i~~l~~~--~~----~~~vg 71 (214)
T 1wbh_A 13 LTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLR------------TEC---AVDAIRAIAKE--VP----EAIVG 71 (214)
T ss_dssp HHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESC------------STT---HHHHHHHHHHH--CT----TSEEE
T ss_pred HHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCC------------Chh---HHHHHHHHHHH--Cc----CCEEe
Confidence 34556666554322 2357899999999766443322 111 11223445444 32 23333
Q ss_pred EeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhh
Q psy259 127 AKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISD 205 (398)
Q Consensus 127 aKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsD 205 (398)
+-. .---+..+.-+++ +|+|+.+--| ..+++.|++.|.|.+.- .-| .++
T Consensus 72 agt--vi~~d~~~~A~~aGAd~v~~p~~d--------------~~v~~~~~~~g~~~i~G-----------~~t---~~e 121 (214)
T 1wbh_A 72 AGT--VLNPQQLAEVTEAGAQFAISPGLT--------------EPLLKAATEGTIPLIPG-----------IST---VSE 121 (214)
T ss_dssp EES--CCSHHHHHHHHHHTCSCEEESSCC--------------HHHHHHHHHSSSCEEEE-----------ESS---HHH
T ss_pred eCE--EEEHHHHHHHHHcCCCEEEcCCCC--------------HHHHHHHHHhCCCEEEe-----------cCC---HHH
Confidence 321 1011455655566 9999866222 25788999999999852 112 334
Q ss_pred HHHHHHhCCcEEEe
Q psy259 206 VANAVLDGADCVML 219 (398)
Q Consensus 206 Vanav~dG~D~vmL 219 (398)
+..|...|+|.|.+
T Consensus 122 ~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 122 LMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 58899999999999
No 90
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=54.22 E-value=26 Score=32.16 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=68.0
Q ss_pred ccceeEEEeCCC--CCCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEE
Q psy259 50 RLTGIICTIGPA--SVAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIA 127 (398)
Q Consensus 50 r~t~Iictigp~--~~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iia 127 (398)
+..+||-=+... ...++.++++++.|.++-++.. |... ..+-++++++. +. +..+-+
T Consensus 15 ~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~------------k~~~---~~~~i~~l~~~--~~----~l~vga 73 (224)
T 1vhc_A 15 RELKIVPVIALDNADDILPLADTLAKNGLSVAEITF------------RSEA---AADAIRLLRAN--RP----DFLIAA 73 (224)
T ss_dssp HHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEET------------TSTT---HHHHHHHHHHH--CT----TCEEEE
T ss_pred HHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEec------------cCch---HHHHHHHHHHh--Cc----CcEEee
Confidence 445566543332 2336678999999966644322 2111 12223445544 32 333333
Q ss_pred eecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 128 KIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 128 KIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
-. .---+..+.-+++ +|+|+.+-.| ..+++.|++.|+|++.- .-| .+++
T Consensus 74 Gt--vl~~d~~~~A~~aGAd~v~~p~~d--------------~~v~~~ar~~g~~~i~G-----------v~t---~~e~ 123 (224)
T 1vhc_A 74 GT--VLTAEQVVLAKSSGADFVVTPGLN--------------PKIVKLCQDLNFPITPG-----------VNN---PMAI 123 (224)
T ss_dssp ES--CCSHHHHHHHHHHTCSEEECSSCC--------------HHHHHHHHHTTCCEECE-----------ECS---HHHH
T ss_pred Cc--EeeHHHHHHHHHCCCCEEEECCCC--------------HHHHHHHHHhCCCEEec-----------cCC---HHHH
Confidence 21 1112556665666 8999765333 34678999999999862 112 2345
Q ss_pred HHHHHhCCcEEEe
Q psy259 207 ANAVLDGADCVML 219 (398)
Q Consensus 207 anav~dG~D~vmL 219 (398)
..|...|+|.|.+
T Consensus 124 ~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 124 EIALEMGISAVKF 136 (224)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHCCCCEEEE
Confidence 8899999999999
No 91
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=54.19 E-value=70 Score=29.32 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=63.8
Q ss_pred chhcCCcccEEEeecChHHHhcHHHHHHhcCeeE---EcCCCCCCCCChhhHHHHHHHHHHHHHHcC--CCEEEeehhhH
Q psy259 116 TGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIM---VARGDLGIEIPPWKVFLAQKQMIAKCNKVG--KPVICATQMLE 190 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgim---vaRgDLg~e~~~~~v~~~qk~ii~~c~~~g--kpvi~ATQmLe 190 (398)
+.+.|..+.+.-.-.|+ ++.++++++..|.|+ |-+|==|-.+.. ....-.+++-+.+.+.| .++.+.
T Consensus 102 i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~-~~l~kI~~lr~~~~~~~~~~~I~Vd----- 173 (231)
T 3ctl_A 102 IRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFIP-EMLDKLAELKAWREREGLEYEIEVD----- 173 (231)
T ss_dssp HHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCCT-THHHHHHHHHHHHHHHTCCCEEEEE-----
T ss_pred HHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccccH-HHHHHHHHHHHHHhccCCCceEEEE-----
Confidence 44456666665555554 778888999999988 444422333332 33333344444444443 444432
Q ss_pred HhhcCCCCCchhhhhHHHHHHhCCcEEEec-CccCCCCC-hHHHHHHHHHHHH
Q psy259 191 SMIKKPRATRAEISDVANAVLDGADCVMLS-GETAKGDY-PVECVRAMHNTCK 241 (398)
Q Consensus 191 SMi~~~~PtraEvsDVanav~dG~D~vmLS-~ETA~G~y-P~eaV~~m~~I~~ 241 (398)
-.-.|.. +..++..|+|.+... +---...- |.++++.+++.+.
T Consensus 174 ---GGI~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 174 ---GSCNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQIL 218 (231)
T ss_dssp ---SCCSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHHHH
T ss_pred ---CCcCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHHHH
Confidence 2223332 356667799999986 43333334 8999998876544
No 92
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=54.06 E-value=11 Score=35.36 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=39.4
Q ss_pred HhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhC
Q psy259 135 VKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDG 213 (398)
Q Consensus 135 v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG 213 (398)
.+.++++.+. +|+|||| |..|+ ..+++...- +++++...|++. |..|+ +.+..|
T Consensus 26 ~~~l~~~~~~GtDaI~vG-gs~gv--t~~~~~~~v----~~ik~~~~Piil-------~p~~~-----------~~~~~g 80 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIG-GTDDV--TEDNVIHLM----SKIRRYPLPLVL-------EISNI-----------ESVMPG 80 (235)
T ss_dssp HHHHHHHHTSSCSEEEEC-CSSCC--CHHHHHHHH----HHHTTSCSCEEE-------ECCCS-----------TTCCTT
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCc--CHHHHHHHH----HHhcCcCCCEEE-------ecCCH-----------HHhhcC
Confidence 3455666666 8999999 76655 356665544 444557889997 44443 223469
Q ss_pred CcEEEe
Q psy259 214 ADCVML 219 (398)
Q Consensus 214 ~D~vmL 219 (398)
+|++++
T Consensus 81 aD~il~ 86 (235)
T 3w01_A 81 FDFYFV 86 (235)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999976
No 93
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=53.51 E-value=64 Score=31.79 Aligned_cols=132 Identities=20% Similarity=0.262 Sum_probs=80.1
Q ss_pred ceeEEEeCCCCC-CHHHH----HHHHHhcccccc-cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccE
Q psy259 52 TGIICTIGPASV-AVDML----EKIIETESNSDE-CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKI 125 (398)
Q Consensus 52 t~Iictigp~~~-~~e~l----~~~i~~Gmnvr~-~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~i 125 (398)
.-||+ ||-+. |.|.. +.+-++|.+.-+ +..+|+ +..|..++- .-+..+.++++ ..+. .+.+
T Consensus 107 ~~vIA--gpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKpr---Ts~~~f~gl----g~egl~~l~~~--~~e~--Gl~~ 173 (350)
T 1vr6_A 107 FTIIA--GPCSVEGREMLMETAHFLSELGVKVLRGGAYKPR---TSPYSFQGL----GEKGLEYLREA--ADKY--GMYV 173 (350)
T ss_dssp EEEEE--ECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCC---CSTTSCCCC----THHHHHHHHHH--HHHH--TCEE
T ss_pred eEEEE--eCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCC---CChHhhcCC----CHHHHHHHHHH--HHHc--CCcE
Confidence 44555 55443 55544 445567877733 333321 122222322 23556777777 5544 4889
Q ss_pred EEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhh
Q psy259 126 IAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEIS 204 (398)
Q Consensus 126 iaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvs 204 (398)
++-+-+.+.++-+.+. .|.+-|+-+++ .. ..+++.+-+.||||++. ++. .|-.|+-
T Consensus 174 ~te~~d~~~~~~l~~~---vd~lkIgAr~~------~n-----~~LL~~va~~~kPVilk---------~G~~~tl~ei~ 230 (350)
T 1vr6_A 174 VTEALGEDDLPKVAEY---ADIIQIGARNA------QN-----FRLLSKAGSYNKPVLLK---------RGFMNTIEEFL 230 (350)
T ss_dssp EEECSSGGGHHHHHHH---CSEEEECGGGT------TC-----HHHHHHHHTTCSCEEEE---------CCTTCCHHHHH
T ss_pred EEEeCCHHHHHHHHHh---CCEEEECcccc------cC-----HHHHHHHHccCCcEEEc---------CCCCCCHHHHH
Confidence 9999888877766664 89999996654 22 22455555789999984 444 4777888
Q ss_pred hHHHHHHh-CCcEEEe
Q psy259 205 DVANAVLD-GADCVML 219 (398)
Q Consensus 205 DVanav~d-G~D~vmL 219 (398)
..++++.. |.+=++|
T Consensus 231 ~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 231 LSAEYIANSGNTKIIL 246 (350)
T ss_dssp HHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHCCCCeEEE
Confidence 88887754 6644455
No 94
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=53.34 E-value=36 Score=33.86 Aligned_cols=93 Identities=18% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCC
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKP 181 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkp 181 (398)
++|..+|+. . +.+|+.|.= ...+......+. +|+|.|. |--| ...+...+. .-.++.+.. ....|
T Consensus 242 ~~i~~lr~~--~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs-~~ggr~~~~g~~~~~-~l~~v~~av-~~~ip 309 (392)
T 2nzl_A 242 EDIKWLRRL--T-----SLPIVAKGI--LRGDDAREAVKHGLNGILVS-NHGARQLDGVPATID-VLPEIVEAV-EGKVE 309 (392)
T ss_dssp HHHHHHC----C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEEC-CGGGTSSTTCCCHHH-HHHHHHHHH-TTSSE
T ss_pred HHHHHHHHh--h-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeC-CCCCCcCCCCcChHH-HHHHHHHHc-CCCCE
Confidence 356666665 3 467888831 112223333333 8999994 1111 112222221 111222211 11478
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
||... ..=+ ..||..|+..|||+||+..
T Consensus 310 Via~G---------GI~~---g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 310 VFLDG---------GVRK---GTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEECS---------SCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEEEC---------CCCC---HHHHHHHHHhCCCeeEECH
Confidence 88632 2222 3699999999999999964
No 95
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=52.68 E-value=27 Score=38.76 Aligned_cols=89 Identities=18% Similarity=0.056 Sum_probs=64.8
Q ss_pred cccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCC-----CCC-------------------Ch-----hhHHHHHHHHH
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLG-----IEI-------------------PP-----WKVFLAQKQMI 172 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg-----~e~-------------------~~-----~~v~~~qk~ii 172 (398)
+++|-.+||.|.++-..|+|++.+|++=||-.||. ++= |. +-|-...+..+
T Consensus 762 ~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~ 841 (913)
T 2x0s_A 762 HYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAV 841 (913)
T ss_dssp CCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGGCHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHH
T ss_pred CCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCCchhhhhhhhhccccccCCCchhHHHHHHHHHHHHH
Confidence 57889999999999999999999999999988873 221 10 23445555556
Q ss_pred HHHHHcC--CCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 173 AKCNKVG--KPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 173 ~~c~~~g--kpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
++|++.+ .||.++-||= ..|.-+ .-.+..|.|-+=+|.
T Consensus 842 ~~gr~~~~~i~vgICGE~~------gdP~~~-----~~L~~~Gid~~S~sP 881 (913)
T 2x0s_A 842 TKGRRVKPMLKMGICGEHG------GDPATI-----GFCHKVGLDYVSCSP 881 (913)
T ss_dssp HHHHHHSTTCEEEECSGGG------GCHHHH-----HHHHHHTCSEEEECG
T ss_pred HHhhhcCCCCeEEEeCCcc------cCHHHH-----HHHHHcCCCEEEECh
Confidence 6666555 5899988862 124433 667888999999883
No 96
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=52.58 E-value=89 Score=28.45 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=60.1
Q ss_pred hhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEc---CCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHH
Q psy259 117 GEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVA---RGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLES 191 (398)
Q Consensus 117 ~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimva---RgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeS 191 (398)
.+.|..+.+.-.-.+ .++.++++++..|.|++- +|==|..+.++.+.. +++.++. +.|+.+.
T Consensus 109 ~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~k-----i~~lr~~~~~~~I~Vd------ 175 (228)
T 3ovp_A 109 RENGMKVGLAIKPGT--SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK-----VHWLRTQFPSLDIEVD------ 175 (228)
T ss_dssp HHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHH-----HHHHHHHCTTCEEEEE------
T ss_pred HHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHH-----HHHHHHhcCCCCEEEe------
Confidence 333555555544444 478888999899998862 332122222222222 2222222 2444443
Q ss_pred hhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 192 MIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 192 Mi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
-.-.| ..+..++..|||.+....---...-|.++++.+.+.+.++
T Consensus 176 --GGI~~-----~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~ 220 (228)
T 3ovp_A 176 --GGVGP-----DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220 (228)
T ss_dssp --SSCST-----TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred --CCcCH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 22233 3447778889999988643334567999988887665543
No 97
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=52.28 E-value=66 Score=30.51 Aligned_cols=87 Identities=6% Similarity=0.072 Sum_probs=57.7
Q ss_pred HHHHHhhchhcCC-cccEEEeecChHHHhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 109 LIEKLMATGEQGK-HIKIIAKIENHQGVKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 109 ~ir~~~~l~~~~~-~~~iiaKIE~~~~v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
.+|+. |. .|. .+.+++.+.+++.++ ++.. .|.|++..-|-..+ .+. ++. .++.+...|+|+++=
T Consensus 29 ~~k~~--l~-~G~~~~gl~~~~~~p~~~e----~a~~~GaD~v~lDlEh~~~~--~~~---~~~-~l~a~~~~~~~~~VR 95 (287)
T 2v5j_A 29 SFKAA--LK-AGRPQIGLWLGLSSSYSAE----LLAGAGFDWLLIDGEHAPNN--VQT---VLT-QLQAIAPYPSQPVVR 95 (287)
T ss_dssp HHHHH--HH-TTCCEEEEEECSCCHHHHH----HHHTSCCSEEEEESSSSSCC--HHH---HHH-HHHHHTTSSSEEEEE
T ss_pred HHHHH--HH-CCCcEEEEEEECCCHHHHH----HHHhCCCCEEEEeCCCccch--HHH---HHH-HHHHHHhcCCCEEEE
Confidence 36666 54 344 688899999887664 3333 79999998886221 222 222 234555678999985
Q ss_pred ehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 186 TQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 186 TQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
+. .+. -.|+..++..|+|+||+.
T Consensus 96 v~---------~~d---~~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 96 PS---------WND---PVQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp CS---------SSC---HHHHHHHHHTTCCEEEES
T ss_pred EC---------CCC---HHHHHHHHhCCCCEEEeC
Confidence 43 112 239999999999999995
No 98
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=51.80 E-value=5 Score=33.03 Aligned_cols=61 Identities=13% Similarity=0.108 Sum_probs=43.5
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
+..+++. ..+.|-++.|.|. +...+++.++-.|.|++| +.|-...+++-+.|...|+||.+
T Consensus 23 v~km~~~--a~~~gi~v~i~a~-----~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 23 ANAINEG--ANLTEVRVIANSG-----AYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHH--HHHHTCSEEEEEE-----ETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHH--HHHCCCceEEEEc-----chHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 4567777 7777877778772 333466667778999998 34444456666778889999997
No 99
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=51.59 E-value=33 Score=32.90 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=23.8
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
+.|||...- .= -..|+..++..|||+||+...
T Consensus 256 ~ipvia~GG---------I~---~~~d~~kal~~GAd~V~igr~ 287 (332)
T 1vcf_A 256 HLPLVASGG---------VY---TGTDGAKALALGADLLAVARP 287 (332)
T ss_dssp SSCEEEESS---------CC---SHHHHHHHHHHTCSEEEECGG
T ss_pred CCeEEEECC---------CC---CHHHHHHHHHhCCChHhhhHH
Confidence 689987432 22 236999999999999999753
No 100
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=51.22 E-value=13 Score=39.04 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhhchh--------cC-----CcccEEEeecChHHHhcHHHHHHh--c-----------CeeEEcCCCCCC
Q psy259 104 ESNVRLIEKLMATGE--------QG-----KHIKIIAKIENHQGVKNLDEIIAE--A-----------DGIMVARGDLGI 157 (398)
Q Consensus 104 vddV~~ir~~~~l~~--------~~-----~~~~iiaKIE~~~~v~n~deIl~~--s-----------DgimvaRgDLg~ 157 (398)
++||.++-.+ +.+ .| ..+.||.=+|+.+.+.|.++|++. . =-||+|+.|=+.
T Consensus 151 asDlL~V~~L--~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~QeVMLGYSDSaK 228 (560)
T 3odm_A 151 GKEISEFQDR--VNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDTAM 228 (560)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEEEEEEESHHHHH
T ss_pred HHHHHHHHHH--HHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeEEEEEeeccCcc
Confidence 4488887666 421 12 267899999999999999999986 2 249999999888
Q ss_pred CCCh----hhHHHHHHHHHHHHHHcCCCEEE
Q psy259 158 EIPP----WKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 158 e~~~----~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
+-|. -.+..+|..+.+.|+++|.++-.
T Consensus 229 DgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 229 SYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 8776 56789999999999999998764
No 101
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=50.65 E-value=39 Score=27.70 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CchHHHHHHhhCCCCCEEEEeCC
Q psy259 270 VAIAAVEAASKVFAGAIVVLTT---------TGTSARLISKYRPRCPIISVTRF 314 (398)
Q Consensus 270 ia~aav~~A~~~~A~aIIv~T~---------SG~tA~~iSkyRP~~PIIAVT~n 314 (398)
.+...++.|.+.+++.||+-++ -|.++..+.+.- +||++.|-+.
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv~~~ 160 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEEeCC
Confidence 3445567788889999999876 367888888876 5999998543
No 102
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=50.62 E-value=47 Score=31.87 Aligned_cols=111 Identities=21% Similarity=0.253 Sum_probs=69.0
Q ss_pred CCCEEEeehhhHHhhcCCCC----------Cchhh-hhHHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhh
Q psy259 179 GKPVICATQMLESMIKKPRA----------TRAEI-SDVANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~P----------traEv-sDVanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~ 246 (398)
++|.|+. |-|-.| +..++ .-.-.-+.+|||.+=+.||+. -|.-|+..-+.+.++....|.-
T Consensus 21 ~~~~iMg-------ilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l 93 (294)
T 2y5s_A 21 ERPLVMG-------ILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEAL 93 (294)
T ss_dssp SSCEEEE-------EEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHH
T ss_pred CCceEEE-------EEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4566664 566677 22333 234456789999999999865 4777788888888888777753
Q ss_pred hhhhHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhcCCcEEEEECCCch----HHHHHHhhCCCCCEEEEeC
Q psy259 247 IWHTKLLTELKSMLPLPIDSA-HSVAIAAVEAASKVFAGAIVVLTTTGT----SARLISKYRPRCPIISVTR 313 (398)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~-~~ia~aav~~A~~~~A~aIIv~T~SG~----tA~~iSkyRP~~PIIAVT~ 313 (398)
.. . ..+...|+. -.++.+|+++ +|. ++-.-||. .+..+++| .||++....
T Consensus 94 ~~------~---~vpiSIDT~~~~Va~aAl~a----Ga~--iINdVsg~~d~~m~~~~a~~--~~~vVlmh~ 148 (294)
T 2y5s_A 94 RP------L---NVPLSIDTYKPAVMRAALAA----GAD--LINDIWGFRQPGAIDAVRDG--NSGLCAMHM 148 (294)
T ss_dssp GG------G---CSCEEEECCCHHHHHHHHHH----TCS--EEEETTTTCSTTHHHHHSSS--SCEEEEECC
T ss_pred hh------C---CCeEEEECCCHHHHHHHHHc----CCC--EEEECCCCCchHHHHHHHHh--CCCEEEECC
Confidence 21 0 122222322 3444454444 776 33555665 67778877 589888764
No 103
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=50.52 E-value=65 Score=30.78 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=46.4
Q ss_pred cccEEEeecChHHHhcHHHHHHh-cCeeEE-cCCCCCCCCC-hhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCC
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE-ADGIMV-ARGDLGIEIP-PWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRA 198 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~-sDgimv-aRgDLg~e~~-~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~P 198 (398)
.++|+.++.+.+-.. .+.+. +|+|.+ ++ +-|-..+ ...+ ..-+++ ......|||.+--+ -
T Consensus 110 g~~v~~~v~~~~~a~---~~~~~GaD~i~v~g~-~~GG~~g~~~~~-~ll~~i---~~~~~iPViaaGGI---------~ 172 (332)
T 2z6i_A 110 GIIVIPVVPSVALAK---RMEKIGADAVIAEGM-EAGGHIGKLTTM-TLVRQV---ATAISIPVIAAGGI---------A 172 (332)
T ss_dssp TCEEEEEESSHHHHH---HHHHTTCSCEEEECT-TSSEECCSSCHH-HHHHHH---HHHCSSCEEEESSC---------C
T ss_pred CCeEEEEeCCHHHHH---HHHHcCCCEEEEECC-CCCCCCCCccHH-HHHHHH---HHhcCCCEEEECCC---------C
Confidence 578999998766443 33344 899999 43 2221111 1111 111222 22457999986332 1
Q ss_pred CchhhhhHHHHHHhCCcEEEec
Q psy259 199 TRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 199 traEvsDVanav~dG~D~vmLS 220 (398)
+ ..|++.++..|+|+|+++
T Consensus 173 ~---~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 173 D---GEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp S---HHHHHHHHHTTCSEEEEC
T ss_pred C---HHHHHHHHHcCCCEEEec
Confidence 1 247888899999999995
No 104
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=50.01 E-value=89 Score=30.33 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=54.3
Q ss_pred HHHHhCCcEEEecCccC-CCCC----hHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhc
Q psy259 208 NAVLDGADCVMLSGETA-KGDY----PVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSA-HSVAIAAVEAASKV 281 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA-~G~y----P~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~-~~ia~aav~~A~~~ 281 (398)
.-+.+|||.+=+.||+. -|.- |+..-+.+.|+..-.|.-. ... ..+...|+. ..++.+|+++
T Consensus 57 ~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~------~~~--~vpISIDT~~~~Va~aAl~a---- 124 (314)
T 3tr9_A 57 KMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIK------KRF--PQLISVDTSRPRVMREAVNT---- 124 (314)
T ss_dssp HHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHH------HHC--CSEEEEECSCHHHHHHHHHH----
T ss_pred HHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHH------hhC--CCeEEEeCCCHHHHHHHHHc----
Confidence 35789999999999954 4655 7777777777776555421 000 122222222 2445555543
Q ss_pred CCcEEEEECCCc----hHHHHHHhhCCCCCEEEEeC
Q psy259 282 FAGAIVVLTTTG----TSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 282 ~A~aIIv~T~SG----~tA~~iSkyRP~~PIIAVT~ 313 (398)
+|+ ++-.-|| ..+..+++|. ||++....
T Consensus 125 Ga~--iINDVsg~~~~~m~~v~a~~g--~~vVlMh~ 156 (314)
T 3tr9_A 125 GAD--MINDQRALQLDDALTTVSALK--TPVCLMHF 156 (314)
T ss_dssp TCC--EEEETTTTCSTTHHHHHHHHT--CCEEEECC
T ss_pred CCC--EEEECCCCCchHHHHHHHHhC--CeEEEECC
Confidence 766 3345555 4677888886 89887653
No 105
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=49.67 E-value=70 Score=30.61 Aligned_cols=121 Identities=10% Similarity=0.049 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhh
Q psy259 169 KQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIW 248 (398)
Q Consensus 169 k~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 248 (398)
.-+...|+..|.|+++- .|..+...-+...-..|++.+...++. .| -++++...+++.+-+..++
T Consensus 85 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~ 149 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAVL 149 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEEE
Confidence 45677889999999874 243333345666778899988876542 12 3455444444332211111
Q ss_pred hhHHHHHHhhcCCCCCChHHH---HHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 249 HTKLLTELKSMLPLPIDSAHS---VAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~---ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
- ..-.++..- -...+.++..++ ..++||+.+=+|.+..-+++ ..|.+.|++|.+..
T Consensus 150 i-----------~~~~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 150 A-----------DQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp C-----------CTTTCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred C-----------CccCChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 1 111122211 122455676665 47999999999998765554 47999999997644
No 106
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=49.49 E-value=47 Score=32.74 Aligned_cols=93 Identities=23% Similarity=0.264 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCC--CChhhHHHHHHHHHHHHHHcCCC
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIE--IPPWKVFLAQKQMIAKCNKVGKP 181 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e--~~~~~v~~~qk~ii~~c~~~gkp 181 (398)
++|..+|+. . +.+|+.|.=. ..+......+. +|+|.|. |--|.. -++..+ ..-.++.+.. .-..|
T Consensus 207 ~~i~~lr~~--~-----~~PvivK~v~--~~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~~~~-~~L~~i~~av-~~~ip 274 (352)
T 3sgz_A 207 NDLSLLQSI--T-----RLPIILKGIL--TKEDAELAMKHNVQGIVVS-NHGGRQLDEVSASI-DALREVVAAV-KGKIE 274 (352)
T ss_dssp HHHHHHHHH--C-----CSCEEEEEEC--SHHHHHHHHHTTCSEEEEC-CGGGTSSCSSCCHH-HHHHHHHHHH-TTSSE
T ss_pred HHHHHHHHh--c-----CCCEEEEecC--cHHHHHHHHHcCCCEEEEe-CCCCCccCCCccHH-HHHHHHHHHh-CCCCe
Confidence 478888877 4 5678888421 12222333333 8999993 211111 111111 1111222211 12578
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
||...- .-+ ..||..|+..|||+||+..
T Consensus 275 Via~GG---------I~~---g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 275 VYMDGG---------VRT---GTDVLKALALGARCIFLGR 302 (352)
T ss_dssp EEEESS---------CCS---HHHHHHHHHTTCSEEEESH
T ss_pred EEEECC---------CCC---HHHHHHHHHcCCCEEEECH
Confidence 886422 222 3699999999999999953
No 107
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=49.37 E-value=14 Score=40.83 Aligned_cols=80 Identities=20% Similarity=0.375 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhchhcCC--cccEEEeecChHHHhcHHHHHHh--c-----------CeeEEcCCCCCCCCCh----hhH
Q psy259 104 ESNVRLIEKLMATGEQGK--HIKIIAKIENHQGVKNLDEIIAE--A-----------DGIMVARGDLGIEIPP----WKV 164 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~--~~~iiaKIE~~~~v~n~deIl~~--s-----------DgimvaRgDLg~e~~~----~~v 164 (398)
++||.++--+ .++.|- .+.|+.=.||.+.++|.++|++. + =-||+|..|=+-+-|. -.+
T Consensus 480 ~sDvL~V~~L--~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD~G~laA~w~l 557 (883)
T 1jqn_A 480 PSDVLAVHLL--LKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQ 557 (883)
T ss_dssp HHHHHHHHHH--HHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHH--HHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccccccHHHHHHHH
Confidence 4589998888 777763 68999999999999999999986 1 2499999988887776 667
Q ss_pred HHHHHHHHHHHHHcCCCEEEe
Q psy259 165 FLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 165 ~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+|..+.+.|+++|.++..-
T Consensus 558 y~Aq~~L~~v~~~~gV~l~lF 578 (883)
T 1jqn_A 558 YQAQDALIKTCEKAGIELTLF 578 (883)
T ss_dssp HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEe
Confidence 899999999999999998863
No 108
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=49.14 E-value=25 Score=32.16 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 169 KQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 169 k~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
+..++.++++|++|.+-|- .+ .+ -+..+....+..|+|+|+- +||-.+.+.+.++|+
T Consensus 202 ~~~v~~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 202 KEQVCTAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp HHHHHHHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred HHHHHHHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 5688999999999999872 00 11 2234567778889999886 799999888887774
No 109
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=48.77 E-value=1.7e+02 Score=28.02 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.|+++- | |..+.-.-+...-..|++.+...+. .-++.+...+++++-...+.
T Consensus 90 a~A~aa~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~~~i- 151 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIV------V-----PQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEGIMV- 151 (346)
T ss_dssp HHHHHHHHTTCCEEEE------E-----ETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTCEEC-
T ss_pred HHHHHHHHhCCCEEEE------E-----CCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCCEEE-
Confidence 4556799999999884 1 3222223456667789998776532 34666666655543321110
Q ss_pred hHHHHHHhhcCCCCCChH--HHHHHHHHHHHHhc-CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSA--HSVAIAAVEAASKV-FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~--~~ia~aav~~A~~~-~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
....++. ..-...+.++..++ ..++|++.+=+|.+.--+++ .+|.+.||+|-+..
T Consensus 152 -----------~~~~np~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 152 -----------HPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp -----------CSSSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -----------CCCCChHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0011211 12222345666655 67899999999998765554 47999999998764
No 110
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=48.61 E-value=1.3e+02 Score=28.82 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=70.9
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|......-+...-..|++.+...+ .| -++++...+++++- ..++.
T Consensus 102 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~l~~~~-~~~~~ 163 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----NF-NDTIAKVSEIVETE-GRIFI 163 (342)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----SH-HHHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhc-CCEEe
Confidence 4566788999999874 2333333456667778999875543 23 35665555544331 11110
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc-CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV-FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~-~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+ |++ + .....-...+.++..++ +.++|++.+-+|.|+.-+++ ..|...|++|.+..
T Consensus 164 ~~-~~n-------~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 164 PP-YDD-------P-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp CS-SSS-------H-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred CC-CCC-------H-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 00 100 0 11122223356776666 48999999999999765554 57999999999853
No 111
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=48.49 E-value=1.2e+02 Score=28.51 Aligned_cols=99 Identities=11% Similarity=0.050 Sum_probs=59.4
Q ss_pred hhhHHHHHHhCCcEEEecCcc-------CCCCChHHHHHHHHHHHHHHHhhhhhhH-----HHHHHhhcCCCCCChHHHH
Q psy259 203 ISDVANAVLDGADCVMLSGET-------AKGDYPVECVRAMHNTCKEAEAAIWHTK-----LLTELKSMLPLPIDSAHSV 270 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS~ET-------A~G~yP~eaV~~m~~I~~~aE~~~~~~~-----~~~~~~~~~~~~~~~~~~i 270 (398)
..|+-.|+.-|+|.|++..-+ ..++=+-|.++...++++.+-+.-..-+ .|..- .....++ ..
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e---~~~~~~~--~~ 160 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCP---YDGDVDP--RQ 160 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBT---TTBCCCH--HH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCC---cCCCCCH--HH
Confidence 468999999999999984333 2345567788888888776654311100 01100 0001222 23
Q ss_pred HHHHHHHHHhcCCcEEEEECCCch-----HHHHHHhhCCCC
Q psy259 271 AIAAVEAASKVFAGAIVVLTTTGT-----SARLISKYRPRC 306 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~SG~-----tA~~iSkyRP~~ 306 (398)
+...++.+.+.+++.|.+.++.|. ...++...|-..
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 455566677889999988888884 345566655433
No 112
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=48.42 E-value=89 Score=30.43 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=69.7
Q ss_pred HHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhh
Q psy259 171 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHT 250 (398)
Q Consensus 171 ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~ 250 (398)
+...|++.|.++++- .|..+...-+...-..|++.+...+ .| -++.+...+++.+.+..++-
T Consensus 108 lA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~~v- 169 (372)
T 1p5j_A 108 AAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWVYI- 169 (372)
T ss_dssp HHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEEEC-
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcEEe-
Confidence 556788999999873 2333333455666778999876532 23 45555554444331111110
Q ss_pred HHHHHHhhcCCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hC-CCCCEEEEeCCh
Q psy259 251 KLLTELKSMLPLPIDS--AHSVAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YR-PRCPIISVTRFP 315 (398)
Q Consensus 251 ~~~~~~~~~~~~~~~~--~~~ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yR-P~~PIIAVT~n~ 315 (398)
....++ .+.-...+.++..+++ .++||+.+=+|.++.-+++ +. |.+.||+|.+..
T Consensus 170 ----------~~~~n~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 170 ----------PPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp ----------CSSCCHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred ----------CCCCCHHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 001122 1222334567777764 6899999999999866554 33 889999999853
No 113
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=48.13 E-value=2.5e+02 Score=28.92 Aligned_cols=116 Identities=14% Similarity=0.099 Sum_probs=69.6
Q ss_pred HHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhh
Q psy259 171 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHT 250 (398)
Q Consensus 171 ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~ 250 (398)
+...|++.|.|+++- .|...-..-+...-..|++.+.. +. -.-++.+...+++++-... +
T Consensus 94 vA~aa~~lGi~~~Iv-----------mP~~~p~~Kv~~~r~~GAeVvlv-~~-----~~dda~~~a~ela~e~g~~-~-- 153 (514)
T 1tdj_A 94 VAFSSARLGVKALIV-----------MPTATADIKVDAVRGFGGEVLLH-GA-----NFDEAKAKAIELSQQQGFT-W-- 153 (514)
T ss_dssp HHHHHHHTTCCEEEE-----------CCSSCCHHHHHHHHHHSCEEECC-CS-----SHHHHHHHHHHHHHHHCCE-E--
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEE-CC-----CHHHHHHHHHHHHHhcCCE-e--
Confidence 556788999999873 23322234556666789987653 32 2346665555544431111 0
Q ss_pred HHHHHHhhcCCCCCChHH--HHHHHHHHHHHhcC-CcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 251 KLLTELKSMLPLPIDSAH--SVAIAAVEAASKVF-AGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~--~ia~aav~~A~~~~-A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+.-.++.. .-..-+.++..+++ .++|+|.+=+|.++.-+++ .+|.+.||+|.+..
T Consensus 154 ---------v~pfdnp~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 154 ---------VPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp ---------CCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred ---------eCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 111112221 11223567766663 7999999999998766665 47999999999853
No 114
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=48.05 E-value=94 Score=24.33 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=43.0
Q ss_pred cCCcEEEEEC-----CCchH-HHHHHhhCCCCCEEEEeCChhhhh-hccccccceEEecCCCCCCCcccCHHHHHHHHHH
Q psy259 281 VFAGAIVVLT-----TTGTS-ARLISKYRPRCPIISVTRFPQVAR-QLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIK 353 (398)
Q Consensus 281 ~~A~aIIv~T-----~SG~t-A~~iSkyRP~~PIIAVT~n~~taR-qL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~ 353 (398)
...+.||+-. .+|.. ++.+.++ |.+|||++|....... .-.+--|+.-++.++.. .+.....+..+++
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~----~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSAT----EQVLITIVEMALR 123 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCC----HHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCC----HHHHHHHHHHHHH
Confidence 4677777643 34433 3455444 9999999998776533 23345699988887541 1334445555555
Q ss_pred HHHH
Q psy259 354 YGRD 357 (398)
Q Consensus 354 ~ake 357 (398)
..++
T Consensus 124 ~~~~ 127 (140)
T 3h5i_A 124 LYEA 127 (140)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4433
No 115
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=47.81 E-value=73 Score=30.28 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=54.9
Q ss_pred HHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCCh-HHHHHHHHHHHHHhcCC
Q psy259 206 VANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDS-AHSVAIAAVEAASKVFA 283 (398)
Q Consensus 206 Vanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aav~~A~~~~A 283 (398)
+-..+.+|||.+=+.+|+. -|.-|+..-.-+.++..-+|.-. ... ..+...|+ ...++. +|.+.++
T Consensus 44 a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~------~~~--~~piSIDT~~~~va~----aAl~aGa 111 (282)
T 1aj0_A 44 ANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIA------QRF--EVWISVDTSKPEVIR----ESAKVGA 111 (282)
T ss_dssp HHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHH------HHC--CCEEEEECCCHHHHH----HHHHTTC
T ss_pred HHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHH------hhc--CCeEEEeCCCHHHHH----HHHHcCC
Confidence 4556789999999999865 67666666666666666555421 000 11222222 123333 4444477
Q ss_pred cEEEEECCCc----hHHHHHHhhCCCCCEEEEeC
Q psy259 284 GAIVVLTTTG----TSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 284 ~aIIv~T~SG----~tA~~iSkyRP~~PIIAVT~ 313 (398)
. ++-.-|| ..+..+++|. ||++....
T Consensus 112 ~--iINdvsg~~d~~~~~~~a~~~--~~vVlmh~ 141 (282)
T 1aj0_A 112 H--IINDIRSLSEPGALEAAAETG--LPVCLMHM 141 (282)
T ss_dssp C--EEEETTTTCSTTHHHHHHHHT--CCEEEECC
T ss_pred C--EEEECCCCCCHHHHHHHHHhC--CeEEEEcc
Confidence 6 3345555 6788888884 88887753
No 116
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=47.54 E-value=42 Score=27.78 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CchHHHHHHhhCCCCCEEEEeCCh
Q psy259 270 VAIAAVEAASKVFAGAIVVLTT---------TGTSARLISKYRPRCPIISVTRFP 315 (398)
Q Consensus 270 ia~aav~~A~~~~A~aIIv~T~---------SG~tA~~iSkyRP~~PIIAVT~n~ 315 (398)
.+...++.|.+.+++.||+-+. -|.++..+.+.-| |||+.|-+.+
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv~~~~ 158 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLIIKEVD 158 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEECCCC
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEEccCC
Confidence 3445577888889999998876 2567777877765 9999987544
No 117
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=47.35 E-value=76 Score=31.17 Aligned_cols=92 Identities=27% Similarity=0.351 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcC-CCCCCCCChhhHHHHHHHHHHHHHHcCCCE
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVAR-GDLGIEIPPWKVFLAQKQMIAKCNKVGKPV 182 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaR-gDLg~e~~~~~v~~~qk~ii~~c~~~gkpv 182 (398)
++|..+|+. . +++|+.|. ....+......+. +|+|.|+- |.-..+.+...+ ...+++ ....+.||
T Consensus 215 ~~i~~i~~~--~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~-~~l~~v---~~~~~~pV 281 (380)
T 1p4c_A 215 EALRWLRDL--W-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPM-EVLAQS---VAKTGKPV 281 (380)
T ss_dssp HHHHHHHHH--C-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGG-GTHHHH---HHHHCSCE
T ss_pred HHHHHHHHh--c-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHH-HHHHHH---HHHcCCeE
Confidence 577777776 4 46788773 1122223333334 89999941 110111111111 111122 23346699
Q ss_pred EEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 183 ICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 183 i~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
|.. ...-+ ..|+..++..|||+||+..
T Consensus 282 ia~---------GGI~~---~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 282 LID---------SGFRR---GSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp EEC---------SSCCS---HHHHHHHHHTTCSCEEESH
T ss_pred EEE---------CCCCC---HHHHHHHHHhCCcHhhehH
Confidence 863 22222 3599999999999999964
No 118
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=47.33 E-value=53 Score=27.56 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=43.1
Q ss_pred HHHhcHHHHHHh--cCeeEEcCC--CCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 133 QGVKNLDEIIAE--ADGIMVARG--DLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 133 ~~v~n~deIl~~--sDgimvaRg--DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
+.+..+++.+.. .|.|+|.=| |+.-..+.+++....+.+++.+++.|.++++.|
T Consensus 49 ~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 49 QGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 566777776653 788877655 888778889999999999999999998888754
No 119
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=46.88 E-value=26 Score=32.31 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCC------CEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 169 KQMIAKCNKVGK------PVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 169 k~ii~~c~~~gk------pvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
..+++.|+++|. |++ |--+=.+++..|...|+|.|-+-
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~--------------PG~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFL--------------PGVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEE--------------EEECSHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHHcCCCccCCCeEe--------------CCCCCHHHHHHHHHcCCCEEEEC
Confidence 367899999999 887 33333467799999999999874
No 120
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=45.93 E-value=88 Score=28.02 Aligned_cols=102 Identities=13% Similarity=0.176 Sum_probs=58.3
Q ss_pred ccEEEeecChHHHhcHHHHHH---hcCeeEEcC---CCCCCCCChhhHHHHHHHHHHHHHHc-CCCEEEeehhhHHhhcC
Q psy259 123 IKIIAKIENHQGVKNLDEIIA---EADGIMVAR---GDLGIEIPPWKVFLAQKQMIAKCNKV-GKPVICATQMLESMIKK 195 (398)
Q Consensus 123 ~~iiaKIE~~~~v~n~deIl~---~sDgimvaR---gDLg~e~~~~~v~~~qk~ii~~c~~~-gkpvi~ATQmLeSMi~~ 195 (398)
.+++.-+....-++.++++++ .+|.|.+.. |==|-.++...+..+ +++ .+.. +.|+.++ -.
T Consensus 114 ~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i-~~~---~~~~~~~pi~v~--------GG 181 (228)
T 1h1y_A 114 MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKV-RAL---RKKYPSLDIEVD--------GG 181 (228)
T ss_dssp CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHH-HHH---HHHCTTSEEEEE--------SS
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHH-HHH---HHhcCCCCEEEE--------CC
Confidence 344455533334677889999 799998842 211333343333221 222 1222 6788764 22
Q ss_pred CCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 196 PRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 196 ~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
-.|. ++..++..|+|++...+---...-|.++++.+.+.++
T Consensus 182 I~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 182 LGPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVE 222 (228)
T ss_dssp CSTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred cCHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Confidence 2332 3455566699999986443344569999988876554
No 121
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=45.70 E-value=1.3e+02 Score=26.31 Aligned_cols=101 Identities=11% Similarity=0.054 Sum_probs=54.6
Q ss_pred EEEeecChHHHhcHHHHHHhcCeeEE-c--CCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCC
Q psy259 125 IIAKIENHQGVKNLDEIIAEADGIMV-A--RGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 125 iiaKIE~~~~v~n~deIl~~sDgimv-a--RgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~Pt 199 (398)
++.-+......+.+.++...+|.|++ + +|==|...+...+. --+.+-+.+... +.|++++ -.-.|
T Consensus 112 i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~i~v~--------GGI~~- 181 (220)
T 2fli_A 112 AGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLE-KVATVAKWRDEKGLSFDIEVD--------GGVDN- 181 (220)
T ss_dssp EEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHH-HHHHHHHHHHHTTCCCEEEEE--------SSCCT-
T ss_pred EEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHH-HHHHHHHHHHhcCCCceEEEE--------CcCCH-
Confidence 44444222233445555566888855 3 22113333332221 122333333333 5777663 22233
Q ss_pred chhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHH
Q psy259 200 RAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNT 239 (398)
Q Consensus 200 raEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I 239 (398)
.++..+...|+|++..+.---.+..|.++++.+.+.
T Consensus 182 ----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 182 ----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp ----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 456777777999999976555567799988887654
No 122
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=45.53 E-value=42 Score=28.09 Aligned_cols=44 Identities=20% Similarity=0.135 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCcEEEEECC---------CchHHHHHHhhCCCCCEEEEeCCh
Q psy259 271 AIAAVEAASKVFAGAIVVLTT---------TGTSARLISKYRPRCPIISVTRFP 315 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~---------SG~tA~~iSkyRP~~PIIAVT~n~ 315 (398)
+...++.|.+.+++.||+-+. -|.++..+.+.-| ||++.|-+..
T Consensus 108 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV~~~~ 160 (163)
T 1tq8_A 108 VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIVHTTE 160 (163)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEECCC-
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEEeCCC
Confidence 445567788889999998876 2566777777654 9999986543
No 123
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=45.51 E-value=68 Score=30.23 Aligned_cols=125 Identities=22% Similarity=0.216 Sum_probs=72.7
Q ss_pred HHHHHHHhhchhcCC-cccEEEeecChHHHhcHHHHHH-------h-cCeeEE--cCCCCCCCCChhhHHHHHHHHHHHH
Q psy259 107 VRLIEKLMATGEQGK-HIKIIAKIENHQGVKNLDEIIA-------E-ADGIMV--ARGDLGIEIPPWKVFLAQKQMIAKC 175 (398)
Q Consensus 107 V~~ir~~~~l~~~~~-~~~iiaKIE~~~~v~n~deIl~-------~-sDgimv--aRgDLg~e~~~~~v~~~qk~ii~~c 175 (398)
|...++. |+..|. .++|.+-|==|.|-.+.+..+. . +|.|=+ ..|-| .+=-.+.+..-.+.+.+.|
T Consensus 54 v~~a~~~--L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~ 130 (260)
T 1p1x_A 54 IPIARKT--LKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRAL-MAGNEQVGFDLVKACKEAC 130 (260)
T ss_dssp HHHHHHH--HHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH--hhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHh
Confidence 5677777 753244 6888877744444333332222 1 555511 11111 0001266777778888889
Q ss_pred HHcCCCE--EEeehhhHHhhcCCCCCchh-hhhHH-HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 176 NKVGKPV--ICATQMLESMIKKPRATRAE-ISDVA-NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 176 ~~~gkpv--i~ATQmLeSMi~~~~PtraE-vsDVa-nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
...|+|+ |+.|-.| +..| +-..+ -++.-|+|.|=-|.--..|.--+|.|+.|.+.+++.
T Consensus 131 ~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 131 AAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp HHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred cccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 8878884 8777666 4455 32222 355689999987632222333579999999887753
No 124
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=45.03 E-value=9.2 Score=38.06 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=30.3
Q ss_pred hcCCcEEEEECCCchHHHHHHhh----CCCCCEEEEeC
Q psy259 280 KVFAGAIVVLTTTGTSARLISKY----RPRCPIISVTR 313 (398)
Q Consensus 280 ~~~A~aIIv~T~SG~tA~~iSky----RP~~PIIAVT~ 313 (398)
...|+.+||-|.||.||..+|-= .|..+.+.+|+
T Consensus 244 ~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltP 281 (365)
T 3pfn_A 244 TVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITP 281 (365)
T ss_dssp EECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEE
T ss_pred EEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEEEe
Confidence 45799999999999999999974 78899999887
No 125
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=44.84 E-value=70 Score=30.21 Aligned_cols=123 Identities=9% Similarity=0.023 Sum_probs=71.1
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...++. .| -++.+...+++.+....++-
T Consensus 81 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCeEeC
Confidence 3566788999999883 233333345566777899987665321 12 24555544444332111110
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+ |. .+..+...-...+.++..++ ..++|++.+-+|.+..-+++ ..|.+.|++|.+..
T Consensus 146 ~~-~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 209 (322)
T 1z7w_A 146 QQ-FE-------NPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVE 209 (322)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred CC-CC-------ChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCC
Confidence 00 10 01111111122356676666 47999999999999866654 47999999998854
No 126
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=44.76 E-value=42 Score=26.82 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=31.5
Q ss_pred HHHHHHH-HHHhcCCcEEEEECC---------CchHHHHHHhhCCCCCEEEE
Q psy259 270 VAIAAVE-AASKVFAGAIVVLTT---------TGTSARLISKYRPRCPIISV 311 (398)
Q Consensus 270 ia~aav~-~A~~~~A~aIIv~T~---------SG~tA~~iSkyRP~~PIIAV 311 (398)
.+...++ .|.+.+++.||+-+. -|.++..+.+.-| ||++.|
T Consensus 95 ~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 95 PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 3445567 778889999998875 3678888888776 999876
No 127
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=44.61 E-value=45 Score=26.48 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCcEEEEECC--------CchHHHHHHhhCCCCCEEEE
Q psy259 270 VAIAAVEAASKVFAGAIVVLTT--------TGTSARLISKYRPRCPIISV 311 (398)
Q Consensus 270 ia~aav~~A~~~~A~aIIv~T~--------SG~tA~~iSkyRP~~PIIAV 311 (398)
.+...++.|.+.+++.||+-+. -|.++..+.+.-| ||++.|
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 3455567888889999999875 3677888887654 999876
No 128
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=44.53 E-value=46 Score=26.44 Aligned_cols=44 Identities=11% Similarity=0.016 Sum_probs=31.5
Q ss_pred HHHHHHHHHhcCCcEEEEECCC------chHHHHHHhhCCCCCEEEEeCCh
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT------GTSARLISKYRPRCPIISVTRFP 315 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S------G~tA~~iSkyRP~~PIIAVT~n~ 315 (398)
+...++.|.+.+++.||+-+.. |.++..+.+.- +||++.|-+..
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~-~~pVlvv~~~~ 140 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTI-KIDMLVVPLRD 140 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTC-CSEEEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcC-CCCEEEeeCCC
Confidence 4455677888899999988762 34566666665 49999986643
No 129
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=44.46 E-value=1.1e+02 Score=30.05 Aligned_cols=149 Identities=15% Similarity=0.265 Sum_probs=93.8
Q ss_pred cceeEEEeCC-CCCCHHHHHHHHH----hcccccccC---CCC--CCCCCCCCCCCCCCCccc---------HHHHHHHH
Q psy259 51 LTGIICTIGP-ASVAVDMLEKIIE----TESNSDECS---EKP--RECPSEPEPPHCKEPNLY---------ESNVRLIE 111 (398)
Q Consensus 51 ~t~Iictigp-~~~~~e~l~~~i~----~Gmnvr~~~---~~~--~pgp~~~~~~k~~~~~~~---------vddV~~ir 111 (398)
.+-||+-+|. ...|.|..++|++ +|.+.-+|. ... .|- ..-|.-+....-.| .++..+++
T Consensus 19 ~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~-~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~ 97 (349)
T 2wqp_A 19 EPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDE-AKQVIPGNADVSIYEIMERCALNEEDEIKLK 97 (349)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGG-GGGCCCTTCSSCHHHHHHHHCCCHHHHHHHH
T ss_pred ceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcc-hhccccCCCCccHHHHHHHhCCCHHHHHHHH
Confidence 4678887776 4558888888775 788873321 110 000 00011111122232 23666666
Q ss_pred HHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhH
Q psy259 112 KLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLE 190 (398)
Q Consensus 112 ~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLe 190 (398)
++ -.+. .+.+++-+=+.++++-+++ . .|.+=||-+|+- .. .+++++-+.|||||+.|-|
T Consensus 98 ~~--~~~~--Gi~~~st~~d~~svd~l~~---~~v~~~KI~S~~~~------n~-----~LL~~va~~gkPviLstGm-- 157 (349)
T 2wqp_A 98 EY--VESK--GMIFISTLFSRAAALRLQR---MDIPAYKIGSGECN------NY-----PLIKLVASFGKPIILSTGM-- 157 (349)
T ss_dssp HH--HHHT--TCEEEEEECSHHHHHHHHH---HTCSCEEECGGGTT------CH-----HHHHHHHTTCSCEEEECTT--
T ss_pred HH--HHHh--CCeEEEeeCCHHHHHHHHh---cCCCEEEECccccc------CH-----HHHHHHHhcCCeEEEECCC--
Confidence 66 4443 5889998888888766655 4 699999988772 22 2466677889999997765
Q ss_pred HhhcCCCCCchhhhhHHHHHHh-CCcEEEecCccCCCCChH
Q psy259 191 SMIKKPRATRAEISDVANAVLD-GADCVMLSGETAKGDYPV 230 (398)
Q Consensus 191 SMi~~~~PtraEvsDVanav~d-G~D~vmLS~ETA~G~yP~ 230 (398)
-|-.|+...++.+.. |.+.++|=+ .-.||.
T Consensus 158 -------at~~Ei~~Ave~i~~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 158 -------NSIESIKKSVEIIREAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp -------CCHHHHHHHHHHHHHHTCCEEEEEC---CCCSSC
T ss_pred -------CCHHHHHHHHHHHHHcCCCEEEEec---cCCCCC
Confidence 367899888888874 678888732 345775
No 130
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=44.02 E-value=60 Score=29.62 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=40.3
Q ss_pred HHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHH
Q psy259 168 QKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNT 239 (398)
Q Consensus 168 qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I 239 (398)
-+..++.|+++|++|.+-|= + +..+....+..|+|+|+- +||-.+.+.+.++
T Consensus 193 ~~~~v~~~~~~G~~V~~WTv------n-------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWAA------H-------TPSQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp CHHHHHHHHHTTCEEEEECC------C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEeC------C-------CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 35788999999999999751 1 224667888899999996 7998888777654
No 131
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=43.84 E-value=42 Score=32.25 Aligned_cols=143 Identities=18% Similarity=0.246 Sum_probs=0.0
Q ss_pred HHHHHHHHhhchhcCCcccEEEe--ecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH--cCC
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAK--IENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK--VGK 180 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaK--IE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~--~gk 180 (398)
+|+++|+. . .+++++| |-. ++..+.+.+. +|+| |..-...+++ +++.+++ .|.
T Consensus 69 ~i~~i~~~--v-----~iPvl~k~~i~~---ide~qil~aaGAD~I-----d~s~~~~~~~-------li~~i~~~~~g~ 126 (297)
T 4adt_A 69 KIEEIRKC--I-----SINVLAKVRIGH---FVEAQILEELKVDML-----DESEVLTMAD-------EYNHINKHKFKT 126 (297)
T ss_dssp HHHHHHTT--C-----CSEEEEEEETTC---HHHHHHHHHTTCSEE-----EEETTSCCSC-------SSCCCCGGGCSS
T ss_pred HHHHHHHh--c-----CCCEEEeccCCc---HHHHHHHHHcCCCEE-----EcCCCCCHHH-------HHHHHHhcCCCC
Q ss_pred CEEEeehhhHHhhcCCCCCchhhhhHHHHHH---hCCcEEEecCccCCCCChHHHHHHHHHHHHHH--------------
Q psy259 181 PVICATQMLESMIKKPRATRAEISDVANAVL---DGADCVMLSGETAKGDYPVECVRAMHNTCKEA-------------- 243 (398)
Q Consensus 181 pvi~ATQmLeSMi~~~~PtraEvsDVanav~---dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a-------------- 243 (398)
++++ |+.++..+.. .|+|.|-..|+ +-...=+++|+++..+..+.
T Consensus 127 ~vvv-----------------~v~~~~Ea~~a~~~Gad~I~v~g~-~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~ 188 (297)
T 4adt_A 127 PFVC-----------------GCTNLGEALRRISEGASMIRTKGE-AGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNF 188 (297)
T ss_dssp CEEE-----------------EESSHHHHHHHHHHTCSEEEECCC-TTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHH
T ss_pred eEEE-----------------EeCCHHHHHHHHhCCCCEEEECCC-cCCCchHHHHHHHHHhhhhhhhhccccccccccc
Q ss_pred -HhhhhhhHHHHHHhhcCCCCCC--hHHHH-HHHHHHHHHhcCCcEEEE
Q psy259 244 -EAAIWHTKLLTELKSMLPLPID--SAHSV-AIAAVEAASKVFAGAIVV 288 (398)
Q Consensus 244 -E~~~~~~~~~~~~~~~~~~~~~--~~~~i-a~aav~~A~~~~A~aIIv 288 (398)
-.......+...+....+.|.- ..-.| ...-+....+.+|+++++
T Consensus 189 ~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlV 237 (297)
T 4adt_A 189 AKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFV 237 (297)
T ss_dssp HHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEE
T ss_pred cccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEE
No 132
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=43.71 E-value=1e+02 Score=31.09 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=58.5
Q ss_pred ccc-EEEeecChHHHhcHHHHHHh-----cCeeEEcCC-----CC---CCCC----ChhhHHHHHHHHHHHHHHc--CCC
Q psy259 122 HIK-IIAKIENHQGVKNLDEIIAE-----ADGIMVARG-----DL---GIEI----PPWKVFLAQKQMIAKCNKV--GKP 181 (398)
Q Consensus 122 ~~~-iiaKIE~~~~v~n~deIl~~-----sDgimvaRg-----DL---g~e~----~~~~v~~~qk~ii~~c~~~--gkp 181 (398)
++. |+.||=--..-+++.+|++. +|||.+.-. |+ ..+. +...-+..-+.|-+..+.. ..|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 567 89999532222245555554 799988621 11 1111 1222333444444444444 478
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhh
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~ 246 (398)
+|.. ...=| ..|+..++..|||+||+.. +.=. +--.+..+|.++.+..
T Consensus 348 IIg~---------GGI~s---~eDa~e~l~aGAd~VqIgr--a~l~---~GP~~~~~i~~~L~~~ 395 (415)
T 3i65_A 348 IIAS---------GGIFS---GLDALEKIEAGASVCQLYS--CLVF---NGMKSAVQIKRELNHL 395 (415)
T ss_dssp EEEC---------SSCCS---HHHHHHHHHHTEEEEEESH--HHHH---HGGGHHHHHHHHHHHH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEEcH--HHHh---cCHHHHHHHHHHHHHH
Confidence 8863 22222 3589999999999999952 2100 0013456666666653
No 133
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=43.47 E-value=97 Score=29.39 Aligned_cols=91 Identities=19% Similarity=0.195 Sum_probs=47.5
Q ss_pred HHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhcCC
Q psy259 206 VANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSA-HSVAIAAVEAASKVFA 283 (398)
Q Consensus 206 Vanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~-~~ia~aav~~A~~~~A 283 (398)
+-.-+.+|||.+=+.||+. -|.-|+..-+.|.++...+|.-. .. ..+...|+. ..++ ++|.+.++
T Consensus 35 a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~------~~---~~piSIDT~~~~va----~aAl~aGa 101 (280)
T 1eye_A 35 GLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELA------AQ---GITVSIDTMRADVA----RAALQNGA 101 (280)
T ss_dssp HHHHHHTTCSEEEEECC--------------HHHHHHHHHHHH------HT---TCCEEEECSCHHHH----HHHHHTTC
T ss_pred HHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhh------cC---CCEEEEeCCCHHHH----HHHHHcCC
Confidence 4556789999999999865 47777888888888887777531 10 122222222 2333 34444477
Q ss_pred cEEEEECCCc-----hHHHHHHhhCCCCCEEEEeC
Q psy259 284 GAIVVLTTTG-----TSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 284 ~aIIv~T~SG-----~tA~~iSkyRP~~PIIAVT~ 313 (398)
..| -.-|| ..+..+++|. ||++....
T Consensus 102 ~iI--Ndvsg~~~d~~m~~~~a~~~--~~vVlmh~ 132 (280)
T 1eye_A 102 QMV--NDVSGGRADPAMGPLLAEAD--VPWVLMHW 132 (280)
T ss_dssp CEE--EETTTTSSCTTHHHHHHHHT--CCEEEECC
T ss_pred CEE--EECCCCCCCHHHHHHHHHhC--CeEEEEcC
Confidence 633 34444 3778888884 88887754
No 134
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=43.39 E-value=1.5e+02 Score=29.02 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=58.5
Q ss_pred CcccEEEeecChHHHhcHHHHHHh-----cCeeEEc-----CCCC-----CCCCC----hhhHHHHHHHHHHHHHHc--C
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE-----ADGIMVA-----RGDL-----GIEIP----PWKVFLAQKQMIAKCNKV--G 179 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~-----sDgimva-----RgDL-----g~e~~----~~~v~~~qk~ii~~c~~~--g 179 (398)
.++.|+.||=--...+++.+|++. +|||.+. |-++ +.+.+ ...-+..-+.+-+..+.. .
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 468999999532112345555553 7999875 2111 11111 122233333333334444 5
Q ss_pred CCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCC-CCChHHHHHHHHHHHHHHHhh
Q psy259 180 KPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAK-GDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 180 kpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~-G~yP~eaV~~m~~I~~~aE~~ 246 (398)
.|||.. ...=| ..|+..++..|||+||+..---. | | .+..+|.++.+..
T Consensus 299 ipvI~~---------GGI~s---~~da~~~l~~GAd~V~vgra~l~~g--P----~~~~~i~~~l~~~ 348 (367)
T 3zwt_A 299 VPIIGV---------GGVSS---GQDALEKIRAGASLVQLYTALTFWG--P----PVVGKVKRELEAL 348 (367)
T ss_dssp SCEEEE---------SSCCS---HHHHHHHHHHTCSEEEESHHHHHHC--T----HHHHHHHHHHHHH
T ss_pred ceEEEE---------CCCCC---HHHHHHHHHcCCCEEEECHHHHhcC--c----HHHHHHHHHHHHH
Confidence 899873 22323 35888999999999999632211 2 3 3456666655543
No 135
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=43.28 E-value=89 Score=23.79 Aligned_cols=62 Identities=13% Similarity=0.069 Sum_probs=40.6
Q ss_pred HHHHHHhcCCcEEEEEC----CCchH-HHHHHhh--CCCCCEEEEeCChhhhhhccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVLT----TTGTS-ARLISKY--RPRCPIISVTRFPQVARQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T----~SG~t-A~~iSky--RP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.||+-. .+|.. ++.+.+. .|.+|||++|..........+..|+.-++.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~ 107 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPI 107 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCC
Confidence 33444556678777643 23433 3455555 689999999998776655567788888887653
No 136
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=43.26 E-value=20 Score=33.38 Aligned_cols=59 Identities=17% Similarity=0.365 Sum_probs=38.3
Q ss_pred hcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCC
Q psy259 136 KNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGA 214 (398)
Q Consensus 136 ~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~ 214 (398)
+.++.+.+. +|+|||| |-.|+. .+++... ++++++...|++. |..+ . +.+..|+
T Consensus 22 ~~~~~~~~~GtD~i~vG-Gs~gvt--~~~~~~~----v~~ik~~~~Pvvl-------fp~~-----~------~~v~~ga 76 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIG-GSDGVT--EDNVLRM----MSKVRRFLVPCVL-------EVSA-----I------EAIVPGF 76 (228)
T ss_dssp THHHHHHTSSCSEEEEC-CCSCCC--HHHHHHH----HHHHTTSSSCEEE-------ECSC-----G------GGCCSCC
T ss_pred HHHHHHHHcCCCEEEEC-CcCCCC--HHHHHHH----HHHhhccCCCEEE-------eCCC-----H------HHccccC
Confidence 345566666 8999999 655554 4666544 4444558999998 2233 2 1244799
Q ss_pred cEEEe
Q psy259 215 DCVML 219 (398)
Q Consensus 215 D~vmL 219 (398)
|+++.
T Consensus 77 D~~l~ 81 (228)
T 3vzx_A 77 DLYFI 81 (228)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99875
No 137
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=42.88 E-value=58 Score=29.65 Aligned_cols=51 Identities=16% Similarity=0.153 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHH-HHHhCCcEEEecCccCCCCChHHHHHHHHH
Q psy259 168 QKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVAN-AVLDGADCVMLSGETAKGDYPVECVRAMHN 238 (398)
Q Consensus 168 qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVan-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~ 238 (398)
-+..++.++++|++|.+-|= + +..+... .+..|+|+|+- +||-.+.+....
T Consensus 183 ~~~~v~~~~~~G~~v~~wTv------n-------~~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~ 234 (248)
T 1zcc_A 183 RPGIIEASRKAGLEIMVYYG------G-------DDMAVHREIATSDVDYINL-------DRPDLFAAVRSG 234 (248)
T ss_dssp SHHHHHHHHHHTCEEEEECC------C-------CCHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEECC------C-------CHHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHH
Confidence 56789999999999999871 2 1245677 78889999886 689887766654
No 138
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=42.74 E-value=1e+02 Score=29.48 Aligned_cols=121 Identities=12% Similarity=0.061 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...++. .| -++.+...+++.+....++.
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 4667788999999884 233333345567777899988875432 12 34555444444332211000
Q ss_pred hHHHHHHhhcCCCCCChHH--H-HHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAH--S-VAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~--~-ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
. ..-.++.. + ....+ ++..+++ .++|++.+-+|.++.-+++ .+|...|++|.+...
T Consensus 157 ~----------~~~~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 157 A----------NQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp C----------CTTTCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred C----------CCCCChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 0 00012221 1 22334 7777774 6899999999999866554 579999999998654
No 139
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=42.69 E-value=1.1e+02 Score=29.68 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.++++- .|..+...-+...-..|++.+...+ .| -++.+...+++++-...++-
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~~~ 169 (364)
T 4h27_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWVYI 169 (364)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeEEe
Confidence 4666789999999874 2333333345556668999877643 33 35666555554322111111
Q ss_pred hHHHHHHhhcCCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hC-CCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDS--AHSVAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YR-PRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~--~~~ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yR-P~~PIIAVT~n~ 315 (398)
.+ | .++ ...-...+.++..+++ .++||+.+=+|.+..-+++ .. |+++||+|-++.
T Consensus 170 ~~-~----------~np~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~ 233 (364)
T 4h27_A 170 PP-F----------DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFG 233 (364)
T ss_dssp CS-S----------CSHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred CC-C----------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 10 1 122 1222234567777764 6999999999998765543 33 889999997643
No 140
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=42.41 E-value=58 Score=32.87 Aligned_cols=123 Identities=13% Similarity=0.097 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...++. .| -++++...+++++-+..++.
T Consensus 189 AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~i 253 (430)
T 4aec_A 189 GLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYML 253 (430)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEEe
Confidence 4566789999999874 244444455677778899988775431 12 24555444444322111111
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+ |+ .+..+..--...+.++..++ ..++||+..=+|.+.--+++ ..|.+.||+|.+..
T Consensus 254 ~~-~~-------np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~ 317 (430)
T 4aec_A 254 QQ-FD-------NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTE 317 (430)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred cC-CC-------CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 00 10 01111112223456666665 47899999999998766554 48999999997744
No 141
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=42.00 E-value=2.1e+02 Score=26.85 Aligned_cols=103 Identities=14% Similarity=0.131 Sum_probs=55.6
Q ss_pred HHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH-
Q psy259 133 QGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA- 207 (398)
Q Consensus 133 ~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa- 207 (398)
++++++ +-.++. +|||++. |--| ..+..++-..+.+..++.++....|||+- -...+-.|+-+.+
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~~t~~ai~la~ 97 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSNATHEAVGLAK 97 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCCCHHHHHHHHH
Confidence 444433 444444 8999986 3221 12222332233333333333224788873 3344444554444
Q ss_pred HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 208 NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
.|-..|+|++|+..=--..--+-+.++....|+..+.-
T Consensus 98 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 98 FAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 45567999999975433333356777888888776643
No 142
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=41.50 E-value=97 Score=28.95 Aligned_cols=60 Identities=18% Similarity=0.148 Sum_probs=34.9
Q ss_pred HHHHHHHH-c--CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhh
Q psy259 170 QMIAKCNK-V--GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 170 ~ii~~c~~-~--gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~ 246 (398)
..++.+++ . ..|||.. -..=| ..|+..++..|||+||+..---. .-| .+..+|.++.+..
T Consensus 230 ~~i~~v~~~~~~~ipvi~~---------GGI~~---~~da~~~l~~GAd~V~vg~~~l~-~~p----~~~~~i~~~l~~~ 292 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGT---------GGIET---GQDAFEHLLCGATMLQIGTALHK-EGP----AIFDRIIKELEEI 292 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECHHHHH-HCT----HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEchHHHh-cCc----HHHHHHHHHHHHH
Confidence 44555544 4 6888863 22222 35888889999999999632221 113 3456666655543
No 143
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=41.31 E-value=1.9e+02 Score=26.96 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.++++- .|..+.-.-+...-..|++.+...+ .| -++.+...+++.+ +...+
T Consensus 68 alA~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~~~~~- 128 (318)
T 2rkb_A 68 AAAYAARKLGIPATIV-----------LPESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-DGWEN- 128 (318)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-TTEEE-
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCCEE-
Confidence 3567789999999873 2222222344556678999877542 23 4555444444332 11111
Q ss_pred hHHHHHHhhcCCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCchHHHHHHhh-----CCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDS--AHSVAIAAVEAASKVF--AGAIVVLTTTGTSARLISKY-----RPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~--~~~ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSky-----RP~~PIIAVT~n~ 315 (398)
.....++ ...-...+.++..+++ .++|++.+-+|.++.-++++ .|...|++|.+..
T Consensus 129 ----------~~~~~n~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 129 ----------VPPFDHPLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp ----------CCSSCSHHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred ----------eCCCCChhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 0011122 1222334566766664 69999999999998766653 3889999999854
No 144
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=41.21 E-value=77 Score=29.79 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhh-hh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAA-IW 248 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~-~~ 248 (398)
-+...|++.|.++++- .|..+.-.-+...-..|++.+...++. .| -++.+...+++++-... ++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 4667788999999873 233233345566777899988765431 12 34555444443322111 11
Q ss_pred hhHHHHHHhhcCCCCCChHHH---HHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hC-CCCCEEEEeCChh
Q psy259 249 HTKLLTELKSMLPLPIDSAHS---VAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YR-PRCPIISVTRFPQ 316 (398)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~---ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yR-P~~PIIAVT~n~~ 316 (398)
.+.-.++... -...+.++..+++ .++||+.+-+|.++.-+++ .+ |...|++|.+...
T Consensus 141 -----------~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 141 -----------LKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp -----------CCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 0001122211 2233567777764 6899999999999876665 34 9999999998653
No 145
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=41.14 E-value=53 Score=33.09 Aligned_cols=127 Identities=16% Similarity=0.075 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+.-.-+...-..|++.+...++...+ .+..+++...+++++....++.
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4566788999999873 233333345566677899988765432111 1112334444433322211110
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
.+ |. .+.++.......+.++..++ ..++||+.+=+|.++.-+++ ..|.+.||+|.+...
T Consensus 243 ~q-~~-------n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 243 DQ-YR-------NASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred Cc-cC-------CcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 00 10 00011111122356666666 37999999999999866554 479999999988544
No 146
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=41.10 E-value=2.4e+02 Score=26.82 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=44.8
Q ss_pred HHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhcccc-------ccceEEecCCCCCCCcccCHHHHHH
Q psy259 277 AASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHLH-------RSIIPLVYEEPSPADWLRDVDTRVA 349 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~-------wGV~Pvl~~~~~~~~w~~d~d~~I~ 349 (398)
+-.+.+|.+|++--..-..++.+++-= ++|+|.+-.-+.+=-|...+ .|-.|-+.+.. .|....+.
T Consensus 187 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y------~~~~~~~~ 259 (281)
T 1oy0_A 187 AVAEAGAFAVVMEMVPAELATQITGKL-TIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRY------ADVGGELR 259 (281)
T ss_dssp HHHHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEESSCSCSSEEEECHHHHTTCSCSCCCTTCCCC------CCHHHHHH
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEeCCCCCCCcceeeHhhhcCCCCCCCCCchhhh------hhhHHHHH
Confidence 334569999998776656788888765 49999998777666555443 34344333322 46666666
Q ss_pred HHH
Q psy259 350 HGI 352 (398)
Q Consensus 350 ~ai 352 (398)
.|+
T Consensus 260 ~a~ 262 (281)
T 1oy0_A 260 RAA 262 (281)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 147
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=41.02 E-value=93 Score=29.08 Aligned_cols=123 Identities=12% Similarity=0.080 Sum_probs=68.9
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...++. .| -++++...+++.+-.. ++
T Consensus 79 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~~- 141 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLV-----------MPDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-FM- 141 (308)
T ss_dssp HHHHHHHHHTCEEEEE-----------EESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-BC-
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-Cc-
Confidence 4667788999999873 233222335566677899988776532 12 3566655555443221 11
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
..-|++ +.....-....+.++..++ ..+.|++.+=+|.++.-+++ ..|...|++|.+...
T Consensus 142 ~~~~~n-------~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 142 PQQFKN-------EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp C---------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred CCcCCC-------hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 111211 1111011122334555555 37899999999999766554 469999999987543
No 148
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=40.99 E-value=1.1e+02 Score=28.79 Aligned_cols=131 Identities=16% Similarity=0.236 Sum_probs=68.0
Q ss_pred ceeEEEeCCCCCCHHHHHHHHHhcccccccCCCCCCCCC--CCCCCCCCCCccc---HHHHHHHHHHhhchhcCCcccEE
Q psy259 52 TGIICTIGPASVAVDMLEKIIETESNSDECSEKPRECPS--EPEPPHCKEPNLY---ESNVRLIEKLMATGEQGKHIKII 126 (398)
Q Consensus 52 t~Iictigp~~~~~e~l~~~i~~Gmnvr~~~~~~~pgp~--~~~~~k~~~~~~~---vddV~~ir~~~~l~~~~~~~~ii 126 (398)
.+|||=+=.+|.|...|..-.+-.--.+.|..+ |-. .+++ ++-.| .+|+.++|+. . ++.|+
T Consensus 52 ~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~~~---GA~~isvlt----d~~~f~Gs~~~l~~ir~~--v-----~lPvl 117 (272)
T 3qja_A 52 IGVIAEVKRASPSAGALATIADPAKLAQAYQDG---GARIVSVVT----EQRRFQGSLDDLDAVRAS--V-----SIPVL 117 (272)
T ss_dssp CEEEEEEC-------------CHHHHHHHHHHT---TCSEEEEEC----CGGGHHHHHHHHHHHHHH--C-----SSCEE
T ss_pred CeEEEEEecCCCCCCccCCCCCHHHHHHHHHHc---CCCEEEEec----ChhhcCCCHHHHHHHHHh--C-----CCCEE
Confidence 789999988887765443210000000001111 221 2232 22222 4478888876 4 46777
Q ss_pred EeecChHHHh---cHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchh
Q psy259 127 AKIENHQGVK---NLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAE 202 (398)
Q Consensus 127 aKIE~~~~v~---n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraE 202 (398)
.| ..+- .+++-.+. +|||.+.-.+|. .+. -+.+++.|++.|..+++.+. |.
T Consensus 118 ~k----dfiid~~qv~~A~~~GAD~VlLi~a~l~----~~~----l~~l~~~a~~lGl~~lvev~-----------t~-- 172 (272)
T 3qja_A 118 RK----DFVVQPYQIHEARAHGADMLLLIVAALE----QSV----LVSMLDRTESLGMTALVEVH-----------TE-- 172 (272)
T ss_dssp EE----SCCCSHHHHHHHHHTTCSEEEEEGGGSC----HHH----HHHHHHHHHHTTCEEEEEES-----------SH--
T ss_pred EC----ccccCHHHHHHHHHcCCCEEEEecccCC----HHH----HHHHHHHHHHCCCcEEEEcC-----------CH--
Confidence 66 1222 24554445 899999766663 333 45678899999999987431 22
Q ss_pred hhhHHHHHHhCCcEEEecCc
Q psy259 203 ISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS~E 222 (398)
.++..|...|+|.+-.++.
T Consensus 173 -ee~~~A~~~Gad~IGv~~r 191 (272)
T 3qja_A 173 -QEADRALKAGAKVIGVNAR 191 (272)
T ss_dssp -HHHHHHHHHTCSEEEEESB
T ss_pred -HHHHHHHHCCCCEEEECCC
Confidence 2346677789999988753
No 149
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=40.90 E-value=1e+02 Score=30.24 Aligned_cols=76 Identities=16% Similarity=0.296 Sum_probs=45.9
Q ss_pred cEEEeec-ChHHHhcHHHHHHh-cCeeEE--cCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCC
Q psy259 124 KIIAKIE-NHQGVKNLDEIIAE-ADGIMV--ARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPR 197 (398)
Q Consensus 124 ~iiaKIE-~~~~v~n~deIl~~-sDgimv--aRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~ 197 (398)
.+.+-+- +.+..+.++..++. +|+|-+ +-|| | ....++++.+++. ++||++-
T Consensus 143 ~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~-----~-----~~~~e~i~~ir~~~~~~pviv~------------ 200 (404)
T 1eep_A 143 RVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGH-----S-----TRIIELIKKIKTKYPNLDLIAG------------ 200 (404)
T ss_dssp CCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCS-----S-----HHHHHHHHHHHHHCTTCEEEEE------------
T ss_pred eEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCC-----h-----HHHHHHHHHHHHHCCCCeEEEc------------
Confidence 3444442 23345556666665 799987 3332 2 2233456666666 8999862
Q ss_pred CCchhhhhHHHHHHhCCcEEEecCc
Q psy259 198 ATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 198 PtraEvsDVanav~dG~D~vmLS~E 222 (398)
.-....++..+...|+|+|.++++
T Consensus 201 -~v~~~~~a~~a~~~Gad~I~vg~~ 224 (404)
T 1eep_A 201 -NIVTKEAALDLISVGADCLKVGIG 224 (404)
T ss_dssp -EECSHHHHHHHHTTTCSEEEECSS
T ss_pred -CCCcHHHHHHHHhcCCCEEEECCC
Confidence 111235677888899999999654
No 150
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=40.87 E-value=51 Score=31.33 Aligned_cols=58 Identities=22% Similarity=0.378 Sum_probs=43.1
Q ss_pred HhcHHHHHHh---cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHH
Q psy259 135 VKNLDEIIAE---ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAV 210 (398)
Q Consensus 135 v~n~deIl~~---sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav 210 (398)
..+++++++. .|.|+|+ .|. ..-..++.+|-++||+|+| ++| ..+.+|+..+..+.
T Consensus 69 ~~~~~~ll~~~~~vD~V~i~-------tp~----~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSLC-------MPP----QYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEALA 128 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEEC-------SCH----HHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhCCCCCCEEEEe-------CCc----HHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHHH
Confidence 4688999986 8999987 232 2345678888999999998 677 46777777776665
Q ss_pred Hh
Q psy259 211 LD 212 (398)
Q Consensus 211 ~d 212 (398)
..
T Consensus 129 ~~ 130 (330)
T 4ew6_A 129 NK 130 (330)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 151
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=40.65 E-value=79 Score=32.04 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=49.6
Q ss_pred Cccc-EEEeecChHHHhcHHHHHHh-----cCeeEEcCCCC--------CCCCCh---hhHHHHHHHHHHHHHH-c--CC
Q psy259 121 KHIK-IIAKIENHQGVKNLDEIIAE-----ADGIMVARGDL--------GIEIPP---WKVFLAQKQMIAKCNK-V--GK 180 (398)
Q Consensus 121 ~~~~-iiaKIE~~~~v~n~deIl~~-----sDgimvaRgDL--------g~e~~~---~~v~~~qk~ii~~c~~-~--gk 180 (398)
.+.. |+.||=--...+++.+|++. +|||.+.-+-. ..+.+- .-+....-.+++..++ . ..
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 3567 89999432112245555544 79998874411 011110 1122223344555544 4 68
Q ss_pred CEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 181 PVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 181 pvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
|||... ..-| ..|+..++..|||+||+.
T Consensus 375 PVIg~G---------GI~s---~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 375 PIIASG---------GIFS---GLDALEKIEAGASVCQLY 402 (443)
T ss_dssp CEEEES---------SCCS---HHHHHHHHHTTEEEEEES
T ss_pred cEEEEC---------CCCC---HHHHHHHHHcCCCEEEEc
Confidence 998742 2222 358899999999999995
No 152
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=40.38 E-value=1.4e+02 Score=23.67 Aligned_cols=58 Identities=9% Similarity=0.133 Sum_probs=38.4
Q ss_pred HHHhcCCcEEEEECC----Cch-HHHHHHhhCCCCCEEEEeCChhhhh-hccccccceEEecCC
Q psy259 277 AASKVFAGAIVVLTT----TGT-SARLISKYRPRCPIISVTRFPQVAR-QLHLHRSIIPLVYEE 334 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~----SG~-tA~~iSkyRP~~PIIAVT~n~~taR-qL~L~wGV~Pvl~~~ 334 (398)
...+...+.||+--. +|. ..+.+.+..|.+|||.+|....... .-.+--|+.-++.++
T Consensus 56 ~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp 119 (152)
T 3eul_A 56 LIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKD 119 (152)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecC
Confidence 334456787776432 443 3456777789999999998765433 334567888888865
No 153
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=40.24 E-value=94 Score=29.23 Aligned_cols=150 Identities=16% Similarity=0.173 Sum_probs=82.5
Q ss_pred ceeEEEeCCCCCCHHHHHHHHHhccccc-ccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeec
Q psy259 52 TGIICTIGPASVAVDMLEKIIETESNSD-ECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIE 130 (398)
Q Consensus 52 t~Iictigp~~~~~e~l~~~i~~Gmnvr-~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE 130 (398)
-++|+.. +.++..+.+.++|...- .+. |.| ...-...+....-..+.+.++++. . ++.++.|+=
T Consensus 22 ~g~i~~~----~~~~~a~~~~~~Ga~~I~~l~--p~~--~~~~~~~G~~~~~~~~~i~~I~~~--~-----~iPv~~k~r 86 (305)
T 2nv1_A 22 GGVIMDV----INAEQAKIAEEAGAVAVMALE--RVP--ADIRAAGGVARMADPTIVEEVMNA--V-----SIPVMAKAR 86 (305)
T ss_dssp TCEEEEE----SSHHHHHHHHHTTCSEEEECC--C---------CCCCCCCCCHHHHHHHHHH--C-----SSCEEEEEC
T ss_pred CCeeecC----CHHHHHHHHHHcCCCEEEEcC--CCc--chhhhccCcccCCCHHHHHHHHHh--C-----CCCEEeccc
Confidence 4577655 44788999999996653 221 111 000000111122234556666665 3 567888764
Q ss_pred ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHH
Q psy259 131 NHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANA 209 (398)
Q Consensus 131 ~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVana 209 (398)
.- -++..+...+. +|+|. .-.+|.. +++ +.+++ |++.|.|+++... ...+...+
T Consensus 87 ~g-~~~~~~~~~a~GAd~V~-~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~--------------~~~e~~~a 141 (305)
T 2nv1_A 87 IG-HIVEARVLEAMGVDYID-ESEVLTP----ADE----EFHLN-KNEYTVPFVCGCR--------------DLGEATRR 141 (305)
T ss_dssp TT-CHHHHHHHHHHTCSEEE-ECTTSCC----SCS----SCCCC-GGGCSSCEEEEES--------------SHHHHHHH
T ss_pred cc-chHHHHHHHHCCCCEEE-EeccCCH----HHH----HHHHH-HhccCCcEEEEeC--------------CHHHHHHH
Confidence 31 02233344444 89996 4344422 221 12233 5577999998542 12355777
Q ss_pred HHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 210 VLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 210 v~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
+..|+|.|.++||+..| -..+++...+.+..+
T Consensus 142 ~~~Gad~V~~~G~~g~g-~~~~~~~h~rt~~~~ 173 (305)
T 2nv1_A 142 IAEGASMLRTKGEPGTG-NIVEAVRHMRKVNAQ 173 (305)
T ss_dssp HHTTCSEEEECCCTTSC-CTHHHHHHHHHHHHH
T ss_pred HHCCCCEEEeccccCcc-chHHHHhhhhhhhcc
Confidence 88999999999998777 456676666554333
No 154
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=40.07 E-value=1.1e+02 Score=27.65 Aligned_cols=81 Identities=6% Similarity=-0.052 Sum_probs=48.0
Q ss_pred HHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHH
Q psy259 277 AASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTR 347 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~ 347 (398)
.+.+.+++.||+-+.. |.++..+.+.-| ||++.+-+.... ......+++.-. ........
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~~------~~~~~~Ilv~~d----~s~~s~~a 186 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIFKHDMVV------NSLFDRVLVAYD----FSKWADRA 186 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEECCCTTT------TCTTSEEEEECC----SSHHHHHH
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEecCcccc------CccCCEEEEEEC----CCHHHHHH
Confidence 6677899998887653 455667777766 999999876531 122223333221 12344556
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEecc
Q psy259 348 VAHGIKYGRDRKFLNQGDPVIVVTGW 373 (398)
Q Consensus 348 I~~ai~~ake~Glik~GD~VVVvsG~ 373 (398)
+.++...++..| ..+.++.-+
T Consensus 187 l~~a~~la~~~~-----~~l~ll~v~ 207 (294)
T 3loq_A 187 LEYAKFVVKKTG-----GELHIIHVS 207 (294)
T ss_dssp HHHHHHHHHHHT-----CEEEEEEEC
T ss_pred HHHHHHHhhhcC-----CEEEEEEEc
Confidence 777777766543 445555443
No 155
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=39.75 E-value=57 Score=27.12 Aligned_cols=44 Identities=20% Similarity=0.328 Sum_probs=32.0
Q ss_pred HHHHHHHHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEEeCCh
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISVTRFP 315 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAVT~n~ 315 (398)
+...++.|.+.+++.||+-+.. |.++..+.+.-| |||+.|-+..
T Consensus 113 ~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv~~~~ 165 (175)
T 2gm3_A 113 KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTIKRNA 165 (175)
T ss_dssp HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEEECCG
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEEcCCc
Confidence 3445677788899999988752 556777777765 9999997654
No 156
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=39.66 E-value=1.9e+02 Score=29.15 Aligned_cols=65 Identities=20% Similarity=0.210 Sum_probs=42.2
Q ss_pred HHhcHHHHHHh-cCeeEE--cCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCCCCchhhhhHHH
Q psy259 134 GVKNLDEIIAE-ADGIMV--ARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPRATRAEISDVAN 208 (398)
Q Consensus 134 ~v~n~deIl~~-sDgimv--aRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~PtraEvsDVan 208 (398)
..+.++..++. +|+|.| +-|+. .....+++.+++. +.||+.-+ .-| ..+...
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~----------~~~~~~i~~i~~~~~~~pvi~~~----------v~t---~~~a~~ 312 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS----------VYQIAMVHYIKQKYPHLQVIGGN----------VVT---AAQAKN 312 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS----------HHHHHHHHHHHHHCTTCEEEEEE----------ECS---HHHHHH
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc----------hhHHHHHHHHHHhCCCCceEecc----------cch---HHHHHH
Confidence 45566666666 899998 44432 2334566777766 89998521 122 234677
Q ss_pred HHHhCCcEEEecC
Q psy259 209 AVLDGADCVMLSG 221 (398)
Q Consensus 209 av~dG~D~vmLS~ 221 (398)
+...|+|+|.++.
T Consensus 313 l~~aGad~I~vg~ 325 (514)
T 1jcn_A 313 LIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHTCSEEEECS
T ss_pred HHHcCCCEEEECC
Confidence 8888999999964
No 157
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=39.52 E-value=99 Score=28.26 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=61.2
Q ss_pred chhcCCcccEEEeecChHHHhcHHHHHH--hcCeeEEcC---CCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhH
Q psy259 116 TGEQGKHIKIIAKIENHQGVKNLDEIIA--EADGIMVAR---GDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLE 190 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v~n~deIl~--~sDgimvaR---gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLe 190 (398)
+.+.|..+.+--+-.|+ ++.++++++ ..|.|++-. |==|..+....+..+. ++-+... +.++.+.
T Consensus 110 i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~-~lr~~~~--~~~I~Vd----- 179 (227)
T 1tqx_A 110 IRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVS-FLRKKYK--NLNIQVD----- 179 (227)
T ss_dssp HHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHH-HHHHHCT--TCEEEEE-----
T ss_pred HHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHH-HHHHhcc--CCeEEEE-----
Confidence 45557666666555554 888999999 799996643 4223334433332222 2221111 4555543
Q ss_pred HhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHH
Q psy259 191 SMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTC 240 (398)
Q Consensus 191 SMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~ 240 (398)
+-=+. ..+..++.-|+|.+...+---...-|.++++.+++.+
T Consensus 180 -----GGI~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~ 221 (227)
T 1tqx_A 180 -----GGLNI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSV 221 (227)
T ss_dssp -----SSCCH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred -----CCCCH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 12222 2445666679999998643333446999998887644
No 158
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=39.49 E-value=1.8e+02 Score=25.94 Aligned_cols=108 Identities=20% Similarity=0.278 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeec-Ch---HH-HhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIE-NH---QG-VKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV 178 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE-~~---~~-v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~ 178 (398)
+.|+++|+. . ++.|..++- ++ .+ .+.++..++. +|+|.+. |+.. ++ -+.+++.|+++
T Consensus 70 ~~i~~i~~~--~-----~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~ 132 (248)
T 1geq_A 70 WIVKEFRRH--S-----STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREE 132 (248)
T ss_dssp HHHHHHHTT--C-----CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHH
T ss_pred HHHHHHHhh--C-----CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHh
Confidence 355666655 3 345666663 32 11 2344555555 8999995 6643 33 24678889999
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEE--ec--CccCCC-CChHHHHHHHHHHHH
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVM--LS--GETAKG-DYPVECVRAMHNTCK 241 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vm--LS--~ETA~G-~yP~eaV~~m~~I~~ 241 (398)
|..++++- +|. |.. +...++..++|++. +| |-|... .++....+.+.++..
T Consensus 133 g~~~~~~i--------~~~-t~~---e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~ 188 (248)
T 1geq_A 133 GIKTVFLA--------APN-TPD---ERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKR 188 (248)
T ss_dssp TCEEEEEE--------CTT-CCH---HHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHH
T ss_pred CCCeEEEE--------CCC-CHH---HHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHh
Confidence 99888742 221 222 34566777777332 22 212110 155566666666554
No 159
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=39.46 E-value=23 Score=30.19 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=26.3
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|-+ .+|+|++|.++.
T Consensus 96 ~~d~vI~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 134 (183)
T 2xhz_A 96 PQDVVIAISNSGESSEITALIPVLKRL-HVPLICITGRPE 134 (183)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHTT-TCCEEEEESCTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 457899999999987554 3433 699999999763
No 160
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=39.36 E-value=79 Score=30.29 Aligned_cols=90 Identities=17% Similarity=0.256 Sum_probs=59.0
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
++.++++ ..+. .+.+++-+-+++.++-+. +.+|.+-|+-+++ ...+ +++.+-+.||||++.|
T Consensus 80 L~~L~~~--~~e~--Glp~~Tev~d~~~v~~l~---~~vd~lqIgA~~~------~n~~-----LLr~va~~gkPVilK~ 141 (285)
T 3sz8_A 80 LKIFAEV--KARF--GVPVITDVHEAEQAAPVA---EIADVLQVPAFLA------RQTD-----LVVAIAKAGKPVNVKK 141 (285)
T ss_dssp HHHHHHH--HHHH--CCCEEEECCSGGGHHHHH---TTCSEEEECGGGT------TCHH-----HHHHHHHTSSCEEEEC
T ss_pred HHHHHHH--HHhc--CCeEEEEeCCHHHHHHHH---HhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeC
Confidence 3455665 4433 588999888877766554 4599999996654 2222 5556668999999854
Q ss_pred hhhHHhhcCCCCCchhhhhHHHHHHh-CCcEEEecCc
Q psy259 187 QMLESMIKKPRATRAEISDVANAVLD-GADCVMLSGE 222 (398)
Q Consensus 187 QmLeSMi~~~~PtraEvsDVanav~d-G~D~vmLS~E 222 (398)
-|- -|-.|+-..+..+.. |.+=|+|..-
T Consensus 142 G~~--------~t~~ei~~ave~i~~~Gn~~i~L~er 170 (285)
T 3sz8_A 142 PQF--------MSPTQLKHVVSKCGEVGNDRVMLCER 170 (285)
T ss_dssp CTT--------SCGGGTHHHHHHHHHTTCCCEEEEEC
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 332 466677666776654 7777777533
No 161
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=39.22 E-value=1.3e+02 Score=23.01 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=36.7
Q ss_pred HHHHHhcCCcEEEEEC----CCchH-HHHHHhh--CCCCCEEEEeCChhhhhhccccccceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLT----TTGTS-ARLISKY--RPRCPIISVTRFPQVARQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T----~SG~t-A~~iSky--RP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~ 335 (398)
.+...+...+.||+-. .+|.. .+.+.+. .|.+|||++|........-.+-.|+.-++.++.
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~ 107 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPV 107 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccC
Confidence 3444556778777643 24443 3444444 468999999987655556667888888887753
No 162
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=39.21 E-value=40 Score=27.47 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=30.2
Q ss_pred HHHHHHH-HHhcCCcEEEEECCC--------chHHHHHHhhCCCCCEEEE
Q psy259 271 AIAAVEA-ASKVFAGAIVVLTTT--------GTSARLISKYRPRCPIISV 311 (398)
Q Consensus 271 a~aav~~-A~~~~A~aIIv~T~S--------G~tA~~iSkyRP~~PIIAV 311 (398)
+...++. |.+.+++.||+-++. |.++..+.+.-| ||++.|
T Consensus 107 ~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 107 DDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp HHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 3444666 778899999998762 778888887764 999876
No 163
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=39.04 E-value=1.1e+02 Score=28.36 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=26.8
Q ss_pred HHHHHHH-HcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 170 QMIAKCN-KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 170 ~ii~~c~-~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
..++.++ ....|||.+.- .-+ ..|+..++..|||+|++..-
T Consensus 231 ~~i~~i~~~~~ipvia~GG---------I~~---~~d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMGG---------VAN---AQDVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHTTCSSCEEECSS---------CCS---HHHHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHHhcCCCEEEECC---------cCC---HHHHHHHHHcCCCEEEECHH
Confidence 3444444 34889997422 222 34888899899999999643
No 164
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=38.80 E-value=1.2e+02 Score=23.58 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=45.3
Q ss_pred HHHHhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHHHHH
Q psy259 276 EAASKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVAH 350 (398)
Q Consensus 276 ~~A~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ 350 (398)
+...+...+.||+-- .+|.. ++.+.+..|..|||.+|....... -.+-.|+.-++.++.. .++....+..
T Consensus 49 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~g~~~~l~KP~~----~~~l~~~i~~ 123 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAV-EAFELEAFDYILKPYQ----ESRIINMLQK 123 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHH-HHHHTTCSEEEESSCC----HHHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHH-HHHhCCcceEEeCCCC----HHHHHHHHHH
Confidence 333445677666532 24433 455666667788999998765433 3467888888877531 1233445555
Q ss_pred HHHHHHHc
Q psy259 351 GIKYGRDR 358 (398)
Q Consensus 351 ai~~ake~ 358 (398)
+++...+.
T Consensus 124 ~~~~~~~~ 131 (143)
T 2qv0_A 124 LTTAWEQQ 131 (143)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 55544443
No 165
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=38.69 E-value=1.3e+02 Score=23.07 Aligned_cols=59 Identities=8% Similarity=0.101 Sum_probs=37.6
Q ss_pred HHHHhcCCcEEEEEC---------CCch-HHHHHHhhCCCCCEEEEeCChhhhh-hccccccceEEecCC
Q psy259 276 EAASKVFAGAIVVLT---------TTGT-SARLISKYRPRCPIISVTRFPQVAR-QLHLHRSIIPLVYEE 334 (398)
Q Consensus 276 ~~A~~~~A~aIIv~T---------~SG~-tA~~iSkyRP~~PIIAVT~n~~taR-qL~L~wGV~Pvl~~~ 334 (398)
+...+...+.||+-- .+|. ..+.+.+..|.+|||++|....... .-.+-.|+.-++.++
T Consensus 41 ~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp 110 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKP 110 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEES
T ss_pred HHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCC
Confidence 334455667666642 2333 2456666779999999998766433 334566888888765
No 166
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=38.53 E-value=65 Score=29.45 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=42.8
Q ss_pred HHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 108 RLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 108 ~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+++. +.+.+..+.|.+--+... -+|++++++-.|.|+.+-++. .....+.+.|.+.|+|++.+
T Consensus 88 ~~~~~~--l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 88 ESARDA--LTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDNV----------AVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHH--HHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSSH----------HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHH--HHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEe
Confidence 444444 555455565554333322 257888888899999884332 24567888899999999975
No 167
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=38.48 E-value=73 Score=29.17 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=39.5
Q ss_pred cCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCC------CCCC----CC--hhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGD------LGIE----IP--PWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgD------Lg~e----~~--~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.|..+.++.-.+.. + +++.++..|||++.=|. ++-+ ++ .+.-......+++.+.+.|||++-
T Consensus 40 aG~~pv~lp~~~~~---~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLG 113 (254)
T 3fij_A 40 VGGFPIALPIDDPS---T-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFA 113 (254)
T ss_dssp HTCEEEEECCCCGG---G-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeCCCch---H-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEE
Confidence 46555555543332 3 77888899999999772 1111 00 123334567889999999999964
No 168
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=38.36 E-value=2.1e+02 Score=26.83 Aligned_cols=42 Identities=21% Similarity=0.149 Sum_probs=31.5
Q ss_pred HHHHHHHhc-----CCcEEEEECCCchHHHHHHhh-----CCCCCEEEEeCCh
Q psy259 273 AAVEAASKV-----FAGAIVVLTTTGTSARLISKY-----RPRCPIISVTRFP 315 (398)
Q Consensus 273 aav~~A~~~-----~A~aIIv~T~SG~tA~~iSky-----RP~~PIIAVT~n~ 315 (398)
.+.++..++ ..++||+.+=+|.|+.-++++ .|. .|++|.+..
T Consensus 175 ~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~ 226 (338)
T 1tzj_A 175 FAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASA 226 (338)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSS
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccC
Confidence 344555444 579999999999998777653 688 999999854
No 169
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=38.25 E-value=1.7e+02 Score=27.93 Aligned_cols=126 Identities=18% Similarity=0.184 Sum_probs=66.9
Q ss_pred HHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhcCC
Q psy259 206 VANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSA-HSVAIAAVEAASKVFA 283 (398)
Q Consensus 206 Vanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~-~~ia~aav~~A~~~~A 283 (398)
.-.-+.+|||.+=+.||+. -|.-|+..-+.|.|+....|.-.. . ..+...|+. -.++.+|+++ ++
T Consensus 58 a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~------~---~vpiSIDT~~~~Va~aAl~a----Ga 124 (294)
T 2dqw_A 58 AREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLS------L---GVPVSVDTRKPEVAEEALKL----GA 124 (294)
T ss_dssp HHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHT------T---CSCEEEECSCHHHHHHHHHH----TC
T ss_pred HHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHh------C---CCeEEEECCCHHHHHHHHHh----CC
Confidence 3456789999999999865 466677777788888777665310 0 122222222 2444444443 77
Q ss_pred cEEEEECCCc----hHHHHHHhhCCCCCEEEEeCC---hhhhhhccccccceEEecCCCCCCCcccCHHHHHHHHHHHHH
Q psy259 284 GAIVVLTTTG----TSARLISKYRPRCPIISVTRF---PQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIKYGR 356 (398)
Q Consensus 284 ~aIIv~T~SG----~tA~~iSkyRP~~PIIAVT~n---~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~~ak 356 (398)
+ ++-.-|| ..+..+++|. ||++..... +++..+..-|-.| .+++-+.+...++.+.
T Consensus 125 ~--iINdVsg~~d~~m~~v~a~~~--~~vVlmh~~eG~p~tm~~~~~y~dv-------------~~ev~~~l~~~i~~a~ 187 (294)
T 2dqw_A 125 H--LLNDVTGLRDERMVALAARHG--VAAVVMHMPVPDPATMMAHARYRDV-------------VAEVKAFLEAQARRAL 187 (294)
T ss_dssp S--EEECSSCSCCHHHHHHHHHHT--CEEEEECCSSSCTTTGGGGCCCSSH-------------HHHHHHHHHHHHHHHH
T ss_pred C--EEEECCCCCChHHHHHHHHhC--CCEEEEcCCCCCCccccccCccccH-------------HHHHHHHHHHHHHHHH
Confidence 7 3445444 4567788884 898887753 4444332211111 1233445566677788
Q ss_pred HcCCC
Q psy259 357 DRKFL 361 (398)
Q Consensus 357 e~Gli 361 (398)
+.|+-
T Consensus 188 ~~Gi~ 192 (294)
T 2dqw_A 188 SAGVP 192 (294)
T ss_dssp HTTCS
T ss_pred HCCCC
Confidence 88863
No 170
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=38.21 E-value=1.2e+02 Score=26.27 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=50.2
Q ss_pred HHHHHHHHhhchhcCCcccEEE-eecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEE
Q psy259 106 NVRLIEKLMATGEQGKHIKIIA-KIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVI 183 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iia-KIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 183 (398)
.+.++|+. ++ .+..|-+ -+.+++- .++-++. +|.| +.++- + ..+++.|++.|+|++
T Consensus 51 ~i~~ir~~--~~---~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~-----~--------~~~~~~~~~~g~~vi 108 (205)
T 1wa3_A 51 VIKELSFL--KE---KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL-----D--------EEISQFCKEKGVFYM 108 (205)
T ss_dssp HHHHTHHH--HH---TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC-----C--------HHHHHHHHHHTCEEE
T ss_pred HHHHHHHH--CC---CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC-----C--------HHHHHHHHHcCCcEE
Confidence 47778877 53 2233323 4455442 3333334 8999 77661 2 357889999999998
Q ss_pred EeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 184 CATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 184 ~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
.-. .| .+|+..|...|+|.+.+.
T Consensus 109 ~g~-----------~t---~~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 109 PGV-----------MT---PTELVKAMKLGHTILKLF 131 (205)
T ss_dssp CEE-----------CS---HHHHHHHHHTTCCEEEET
T ss_pred CCc-----------CC---HHHHHHHHHcCCCEEEEc
Confidence 521 12 235788999999999874
No 171
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=38.01 E-value=59 Score=30.06 Aligned_cols=103 Identities=12% Similarity=0.015 Sum_probs=59.4
Q ss_pred CCcccEEEeecChHHHhcHHHHHHhcCeeEE---cCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhc
Q psy259 120 GKHIKIIAKIENHQGVKNLDEIIAEADGIMV---ARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIK 194 (398)
Q Consensus 120 ~~~~~iiaKIE~~~~v~n~deIl~~sDgimv---aRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~ 194 (398)
|..+.+..+-+|+ ++.++++++.+|.|.+ .+| +|-.--.+....-.+++-+...+. +.|+.+.
T Consensus 126 g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~pg-fggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vd--------- 193 (237)
T 3cu2_A 126 PVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDPR-NGTKYPSELILDRVIQVEKRLGNRRVEKLINID--------- 193 (237)
T ss_dssp ECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEETT-TTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEE---------
T ss_pred CceEEEEEeCCCh--HHHHHHHhhcCceeeeeeeccC-cCCeecChhHHHHHHHHHHHHHhcCCCceEEEE---------
Confidence 5555555555554 7778888888998877 666 332222233333334444444333 4666542
Q ss_pred CCCCCchhhhhHHHHHH--hCCcEEEecCccCCCCChHHHHHHHHHH
Q psy259 195 KPRATRAEISDVANAVL--DGADCVMLSGETAKGDYPVECVRAMHNT 239 (398)
Q Consensus 195 ~~~PtraEvsDVanav~--dG~D~vmLS~ETA~G~yP~eaV~~m~~I 239 (398)
.-=+. ..+..++. -|+|++...+---.. -|.++++.+++.
T Consensus 194 -GGI~~---~~~~~~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 194 -GSMTL---ELAKYFKQGTHQIDWLVSGSALFSG-ELKTNLKVWKSS 235 (237)
T ss_dssp -SSCCH---HHHHHHHHSSSCCCCEEECGGGGSS-CHHHHHHHHHHH
T ss_pred -CCcCH---HHHHHHHHhCCCCcEEEEeeHHhCC-CHHHHHHHHHHh
Confidence 11121 23456666 799999986443333 688888887653
No 172
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=37.96 E-value=1.3e+02 Score=28.99 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=50.2
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecCh----------HHHhcHHHHHHh-cCeeEEcCCCCCCC--CChhhHHHHHHHHH
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENH----------QGVKNLDEIIAE-ADGIMVARGDLGIE--IPPWKVFLAQKQMI 172 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~----------~~v~n~deIl~~-sDgimvaRgDLg~e--~~~~~v~~~qk~ii 172 (398)
=|+++|+. + |.+..|..||--. +.++-...+-+. .|.|-|.-|...-. +|... ..+...+
T Consensus 208 iv~aVR~a--v---G~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~ 280 (349)
T 3hgj_A 208 VAQAVREV--V---PRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP--GFQVPFA 280 (349)
T ss_dssp HHHHHHHH--S---CTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT--TTTHHHH
T ss_pred HHHHHHHH--h---cCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc--cccHHHH
Confidence 45666666 5 5567788888531 222222222222 79998875543222 11100 0122233
Q ss_pred HHHH-HcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhC-CcEEEec
Q psy259 173 AKCN-KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDG-ADCVMLS 220 (398)
Q Consensus 173 ~~c~-~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG-~D~vmLS 220 (398)
+..+ ..+.|||..-- .-|. .|...++..| +|+|++.
T Consensus 281 ~~ir~~~~iPVi~~Gg---------i~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 281 DAVRKRVGLRTGAVGL---------ITTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHCCEEEECSS---------CCCH---HHHHHHHHTTSCSEEEES
T ss_pred HHHHHHcCceEEEECC---------CCCH---HHHHHHHHCCCceEEEec
Confidence 3333 34889986322 1222 3456778888 9999995
No 173
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=37.67 E-value=38 Score=31.54 Aligned_cols=45 Identities=24% Similarity=0.369 Sum_probs=34.0
Q ss_pred HhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 135 VKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 135 v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
++.+.++++.+|.+.|+.|=+ .++.....+.+++.+++.++|+++
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVl 91 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEE
Confidence 456788888999999987733 344444556677888999999998
No 174
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=37.44 E-value=2.8e+02 Score=26.38 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=33.4
Q ss_pred HHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccc
Q psy259 277 AASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHL 323 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L 323 (398)
+-.+.+|.+|++--..-..++.+++-= ++|+|.+-.-+.+=-|...
T Consensus 169 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGaG~~~dgQvLV 214 (275)
T 1o66_A 169 AHDDAGAAVVLMECVLAELAKKVTETV-SCPTIGIGAGADCDGQVLV 214 (275)
T ss_dssp HHHHTTCSEEEEESCCHHHHHHHHHHC-SSCEEEESSCSCSSEEEEC
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEECCCCCCCcceee
Confidence 445679999998776656788888765 4999999877666555433
No 175
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=37.43 E-value=1.3e+02 Score=23.37 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=37.8
Q ss_pred hcCCcEEEEECC----Cch-HHHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 280 KVFAGAIVVLTT----TGT-SARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 280 ~~~A~aIIv~T~----SG~-tA~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
....+.||+-.. +|. ..+.+.+..|.+|||.+|...... ..-.+-.|+.-++.++.
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~ 108 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPV 108 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSC
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCC
Confidence 346777776543 343 345667778999999999876543 33346778888887753
No 176
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=37.35 E-value=2.7e+02 Score=26.27 Aligned_cols=130 Identities=14% Similarity=0.055 Sum_probs=71.2
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCC-Cc--hh----hhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRA-TR--AE----ISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~P-tr--aE----vsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
-+...|+..|.++.+- |-.. .| .. .| -.-+...-..|++.+...+.... ..+-++.+...++..+
T Consensus 83 alA~~a~~~G~~~~iv------~p~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~ 154 (341)
T 1f2d_A 83 MVAALAAKLGKKCVLI------QEDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDI-GMRKSFANALQELEDA 154 (341)
T ss_dssp HHHHHHHHHTCEEEEE------EECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCS-SCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCceEEE------eccC-CCccccccccccccccHHHHHhCCCEEEEeCCccch-hHHHHHHHHHHHHHhc
Confidence 4567789999998873 1111 11 00 11 23556777789998877543211 1123444444444432
Q ss_pred HHhhhhh-hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc-----CCcEEEEECCCchHHHHHHh----hCCCCCEEEEe
Q psy259 243 AEAAIWH-TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV-----FAGAIVVLTTTGTSARLISK----YRPRCPIISVT 312 (398)
Q Consensus 243 aE~~~~~-~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~-----~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT 312 (398)
-...++. .+.|+ .+... ......+.++..++ ..++||+..=+|.|+.-+++ ++|.+.|++|-
T Consensus 155 ~~~~~~i~~~~~~-----np~~~---~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe 226 (341)
T 1f2d_A 155 GHKPYPIPAGCSE-----HKYGG---LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAID 226 (341)
T ss_dssp TCCEEEECGGGTT-----STTTT---THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEE
T ss_pred CCcEEEeCCCcCC-----CCccH---HHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEE
Confidence 1111111 11021 11111 12233345555544 47999999999999776664 56899999999
Q ss_pred CCh
Q psy259 313 RFP 315 (398)
Q Consensus 313 ~n~ 315 (398)
+..
T Consensus 227 ~~~ 229 (341)
T 1f2d_A 227 ASF 229 (341)
T ss_dssp CSS
T ss_pred ecC
Confidence 854
No 177
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=37.26 E-value=30 Score=27.55 Aligned_cols=41 Identities=5% Similarity=-0.194 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEE
Q psy259 270 VAIAAVEAASKVFAGAIVVLTTTGTSARLISKYRPRCPIISV 311 (398)
Q Consensus 270 ia~aav~~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAV 311 (398)
.+...++.|.+.+++.||+-+..-.++..+.+.-| ||++.|
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 34455678888899988877653356677777665 998865
No 178
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=37.03 E-value=96 Score=23.72 Aligned_cols=62 Identities=11% Similarity=0.145 Sum_probs=40.2
Q ss_pred HHHHHHhcCCcEEEEECC----Cch-HHHHHHhhCCCCCEEEEeCChhhhh-hccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVLTT----TGT-SARLISKYRPRCPIISVTRFPQVAR-QLHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T~----SG~-tA~~iSkyRP~~PIIAVT~n~~taR-qL~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.||+-.. +|. ..+.+.+..|.+|||.+|....... .-.+-.|+.-++.++.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPV 110 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCC
Confidence 334445556777766432 343 3456667779999999998776543 3346678888887753
No 179
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=36.88 E-value=2e+02 Score=26.74 Aligned_cols=119 Identities=14% Similarity=0.097 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|....-.-+...-..|++.+...+. | -++.+...+++.+- ..++-
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GYALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-CcEec
Confidence 4566788999999873 23333333566777789997754432 3 24555555544331 11110
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc-----CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV-----FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~-----~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+ |++ + .....-...+.++..++ ..+.|++.+=+|.|+.-+++ ..|...|++|.+..
T Consensus 141 ~~-~~n-------~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 141 HP-FDD-------P-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp CS-SSS-------H-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred CC-CCC-------c-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 00 100 0 11122222334555444 47899999999999766554 47999999999864
No 180
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=36.36 E-value=77 Score=30.58 Aligned_cols=89 Identities=10% Similarity=0.170 Sum_probs=58.3
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
++.++++ ..+. .+.+++-+-+++.++-+++ .+|.+-|+-+++ ...+ +++.+-+.||||++.|
T Consensus 101 L~~L~~~--~~e~--GLpv~Tev~D~~~v~~l~~---~vd~lkIgA~~~------~n~~-----LLr~va~~gkPVilK~ 162 (298)
T 3fs2_A 101 LEVFSDL--KKEY--GFPVLTDIHTEEQCAAVAP---VVDVLQIPAFLC------RQTD-----LLIAAARTGRVVNVKK 162 (298)
T ss_dssp HHHHHHH--HHHH--CCCEEEECCSHHHHHHHTT---TCSEEEECGGGT------TCHH-----HHHHHHHTTSEEEEEC
T ss_pred HHHHHHH--HHhc--CCeEEEEeCCHHHHHHHHh---hCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeC
Confidence 3455555 4333 5889999988887766544 499999986654 2222 4445568899999854
Q ss_pred hhhHHhhcCCCCCchhhhhHHHHHHh-CCcEEEecC
Q psy259 187 QMLESMIKKPRATRAEISDVANAVLD-GADCVMLSG 221 (398)
Q Consensus 187 QmLeSMi~~~~PtraEvsDVanav~d-G~D~vmLS~ 221 (398)
-|- -|-.|+-..+..+.. |.+=|+|.-
T Consensus 163 Gms--------~t~~ei~~ave~i~~~Gn~~iiL~e 190 (298)
T 3fs2_A 163 GQF--------LAPWDMKNVLAKITESGNPNVLATE 190 (298)
T ss_dssp CTT--------CCGGGHHHHHHHHHTTTCCCEEEEE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 431 466677666666654 777677753
No 181
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=36.35 E-value=1.6e+02 Score=27.67 Aligned_cols=119 Identities=15% Similarity=0.109 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+.-..+...-..|++.+...+. | -++.+...+++.+-. .++-
T Consensus 88 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~~i 149 (323)
T 1v71_A 88 AIALSAKILGIPAKII-----------MPLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LTII 149 (323)
T ss_dssp HHHHHHHHTTCCEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CBCC
T ss_pred HHHHHHHHcCCCEEEE-----------CCCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CEec
Confidence 4566789999999874 22222233466777789998866543 2 134554444433211 1110
Q ss_pred hHHHHHHhhcCCCCCChHHHHHHHHHHHHHhc-CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPIDSAHSVAIAAVEAASKV-FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~-~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+ |++ + .....-...+.++..++ ..++|++.+=+|.|+.-+++ ++|.+.|++|.+..
T Consensus 150 ~~-~~n-------~-~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 150 PP-YDH-------P-HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp CS-SSS-------H-HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred CC-CCC-------c-chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 00 100 0 11112223355666665 47999999999999866554 57999999999854
No 182
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=36.22 E-value=1.4e+02 Score=27.82 Aligned_cols=119 Identities=12% Similarity=0.107 Sum_probs=69.9
Q ss_pred HHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhhh
Q psy259 171 MIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWHT 250 (398)
Q Consensus 171 ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~ 250 (398)
+...|+..|.++++- .|..+...-+...-..|++.+...++. .| -++++...+++.+-...++
T Consensus 82 lA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~~-- 144 (313)
T 2q3b_A 82 LAMVCAARGYRCVLT-----------MPETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYFV-- 144 (313)
T ss_dssp HHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEC--
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEEe--
Confidence 567788999999873 232222334566667899988776531 12 2455444444332111010
Q ss_pred HHHHHHhhcCCCCCChHH--H-HHHHHHHHHHhc--CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 251 KLLTELKSMLPLPIDSAH--S-VAIAAVEAASKV--FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~--~-ia~aav~~A~~~--~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
...-.++.. . ....+.++..++ ..++|++.+=+|.++.-+++ ..|...|++|.+..
T Consensus 145 ---------~~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~ 209 (313)
T 2q3b_A 145 ---------PQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAA 209 (313)
T ss_dssp ---------CCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred ---------CCCCCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 000112221 1 222356777766 47899999999999866554 46999999998754
No 183
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=36.01 E-value=94 Score=29.07 Aligned_cols=120 Identities=9% Similarity=-0.005 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.++++- .|..+...-+...-..|++.+...++ |.| -++.+...+++++.+.. +.
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~~-~~~~~~a~~~~~~~~~~-~~ 138 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QGM-EGARDLALEMANRGEGK-LL 138 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---THH-HHHHHHHHHHHHTTSCE-EC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCc-cc
Confidence 4667788999999873 23333334556677789998887642 222 24444433333221111 10
Q ss_pred hHHHHHHhhcCCCCCChH--H-HHHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hCCCCCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSA--H-SVAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YRPRCPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~--~-~ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~~ 316 (398)
.+ | .++. . --...+.++..+++ .++|++.+=+|.++.-+++ ..|...|++|.+...
T Consensus 139 ~~-~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 139 DQ-F----------NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp CT-T----------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred CC-c----------CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 00 1 1221 1 11223466777664 7999999999999866654 469999999988543
No 184
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=35.89 E-value=1.1e+02 Score=28.73 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=34.5
Q ss_pred HHHHHHHH-c-CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 170 QMIAKCNK-V-GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 170 ~ii~~c~~-~-gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
..++.+++ . ..|||.. -..-| ..|+..++..|||+||+..---. .-| .+..++.++.+.
T Consensus 233 ~~i~~v~~~~~~ipvi~~---------GGI~~---~~da~~~l~~GAd~V~ig~~~l~-~~p----~~~~~i~~~l~~ 293 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGC---------GGVYS---GEDAFLHILAGASMVQVGTALQE-EGP----GIFTRLEDELLE 293 (314)
T ss_dssp HHHHHHHHHCTTSEEEEE---------SSCCS---HHHHHHHHHHTCSSEEECHHHHH-HCT----THHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEchhhHh-cCc----HHHHHHHHHHHH
Confidence 44444444 4 7888863 22222 34888989999999999643222 113 345566655544
No 185
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=35.78 E-value=80 Score=26.02 Aligned_cols=41 Identities=29% Similarity=0.212 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CchHHHHHHhhCCCCCEEEE
Q psy259 270 VAIAAVEAASKVFAGAIVVLTT---------TGTSARLISKYRPRCPIISV 311 (398)
Q Consensus 270 ia~aav~~A~~~~A~aIIv~T~---------SG~tA~~iSkyRP~~PIIAV 311 (398)
.+...++.|.+.+++.||+-+. -|.++..+.+.- +||++.|
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a-~~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKA-NKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhC-CCCEEEe
Confidence 3445567788889999998764 377888888865 5999876
No 186
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=35.27 E-value=77 Score=27.63 Aligned_cols=88 Identities=23% Similarity=0.251 Sum_probs=52.3
Q ss_pred HHHHHHHHhhchhcCCcccEEE--eecChHHHhc-HHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCC
Q psy259 106 NVRLIEKLMATGEQGKHIKIIA--KIENHQGVKN-LDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKP 181 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iia--KIE~~~~v~n-~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkp 181 (398)
-|+++|+. . .+..|.+ |+.. +.+. +++..+. +|+|.+. ++. .+ ..-+.+++.|+++|++
T Consensus 43 ~i~~ir~~--~----~~~~i~~~~~~~~--~~~~~~~~~~~~Gad~v~v~--~~~----~~---~~~~~~~~~~~~~g~~ 105 (211)
T 3f4w_A 43 AIKAIKEK--Y----PHKEVLADAKIMD--GGHFESQLLFDAGADYVTVL--GVT----DV---LTIQSCIRAAKEAGKQ 105 (211)
T ss_dssp HHHHHHHH--C----TTSEEEEEEEECS--CHHHHHHHHHHTTCSEEEEE--TTS----CH---HHHHHHHHHHHHHTCE
T ss_pred HHHHHHHh--C----CCCEEEEEEEecc--chHHHHHHHHhcCCCEEEEe--CCC----Ch---hHHHHHHHHHHHcCCe
Confidence 45666665 2 2344544 4543 3344 5666666 8999994 332 11 2236788889999999
Q ss_pred EEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 182 VICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 182 vi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
+++. |. +| .|. ...+..+...|+|.|.+.
T Consensus 106 ~~v~------~~-~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 106 VVVD------MI-CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EEEE------CT-TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred EEEE------ec-CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 9863 11 11 121 233567778899998774
No 187
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=34.98 E-value=1.4e+02 Score=22.74 Aligned_cols=56 Identities=11% Similarity=0.037 Sum_probs=35.9
Q ss_pred HhcCCcEEEEECC----CchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 279 SKVFAGAIVVLTT----TGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 279 ~~~~A~aIIv~T~----SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
.+...+.|++-.. +|.. .+.+-+..|.+|||.+|...... ..-.+-.|+.-++.++
T Consensus 43 ~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp 104 (134)
T 3f6c_A 43 ETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKK 104 (134)
T ss_dssp HHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGG
T ss_pred HhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCC
Confidence 4456787777543 4433 45677778999999999877643 2334567888888765
No 188
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=34.89 E-value=75 Score=28.95 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHH
Q psy259 169 KQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMH 237 (398)
Q Consensus 169 k~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~ 237 (398)
+..++.|+++|++|.+-|= + +..+....+..|+|+|+- +||-.+.+.+.
T Consensus 200 ~~~v~~~~~~G~~v~~WTv------n-------~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 200 VQQVSDIKAAGYKVLAFTI------N-------DESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp HHHHHHHHHTTCEEEEECC------C-------CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcC------C-------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 5788999999999999651 1 334667888899999997 78988776654
No 189
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=34.82 E-value=49 Score=31.33 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=34.8
Q ss_pred HhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 135 VKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 135 v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+-++|+++.+|++.|..|=| .++-...-...++.+++.++|+++
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l-----~~~~~~~~~~a~~~a~~~~~PvVl 93 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHL-----SQEREQSLLAASDYARQVNKLTVV 93 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSC-----CHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHCCeEEEecCCC-----ChHHHHHHHHHHHHHHHcCCcEEE
Confidence 567888999999999998854 233344555667889999999997
No 190
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=34.77 E-value=18 Score=36.17 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=29.8
Q ss_pred cCCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCC
Q psy259 281 VFAGAIVVLTTTGTSARLISK----YRPRCPIISVTRF 314 (398)
Q Consensus 281 ~~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n 314 (398)
..++.+||-|.||.||..+|- ..|..+.+.+||-
T Consensus 227 ~~~DGliVsTPTGSTAYslSAGGpIv~P~~~~~~ltPI 264 (388)
T 3afo_A 227 TTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPI 264 (388)
T ss_dssp EEEEEEEEECTGGGGTHHHHTTCCEECTTSCEEEEEEE
T ss_pred ecCCeEEEeCCCcHHHHHHhccCCcccCCCCceEEeee
Confidence 578999999999999999996 5788888888873
No 191
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=34.73 E-value=31 Score=32.53 Aligned_cols=39 Identities=21% Similarity=0.405 Sum_probs=28.3
Q ss_pred cCCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChhhhhh
Q psy259 281 VFAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQVARQ 320 (398)
Q Consensus 281 ~~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~taRq 320 (398)
..-+.+|++|.||.|+..+ +|-+ .+++|++|++...+|.
T Consensus 78 ~~~dlvI~iS~SG~T~e~~~a~~~ak~~-g~~~iaIT~~~~La~~ 121 (302)
T 1tzb_A 78 ARDGLLIAVSYSGNTIETLYTVEYAKRR-RIPAVAITTGGRLAQM 121 (302)
T ss_dssp CSSSEEEEECSSSCCHHHHHHHHHHHHT-TCCEEEEESSTTGGGS
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEECCCchHHHC
Confidence 3457889999999987544 3444 6899999998833443
No 192
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=34.61 E-value=1.4e+02 Score=27.15 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=50.0
Q ss_pred HhcHHHHHHh-cCee--EEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH-HHHH
Q psy259 135 VKNLDEIIAE-ADGI--MVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV-ANAV 210 (398)
Q Consensus 135 v~n~deIl~~-sDgi--mvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV-anav 210 (398)
++.+++.++. +|.| .+--|.+ +.+.+...-+.+.+.|++.|.|+++-+-.-.--+.. .-+..++.+. ..|.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~----~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~-~~~~~~~~~~a~~a~ 176 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSD----EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQN-ERDPELVAHAARLGA 176 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETST----THHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCC----CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCC-CCCHhHHHHHHHHHH
Confidence 4566777777 8888 3333433 556676777889999999999999832000000000 0122344454 5677
Q ss_pred HhCCcEEEec
Q psy259 211 LDGADCVMLS 220 (398)
Q Consensus 211 ~dG~D~vmLS 220 (398)
..|+|.|-++
T Consensus 177 ~~Gad~i~~~ 186 (273)
T 2qjg_A 177 ELGADIVKTS 186 (273)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 8899999987
No 193
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.57 E-value=1e+02 Score=24.42 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=39.2
Q ss_pred HHHHHhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 275 VEAASKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
.+...+...+.||+-. .+|.. ++.+.+..|.+|||++|...... ..-.+-.|+.-++.++
T Consensus 59 l~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp 124 (150)
T 4e7p_A 59 IQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKE 124 (150)
T ss_dssp HHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT
T ss_pred HHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecC
Confidence 3444556677776643 24433 45666778999999999876542 2334667888888765
No 194
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=34.42 E-value=75 Score=29.92 Aligned_cols=85 Identities=20% Similarity=0.321 Sum_probs=54.8
Q ss_pred HHhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHH
Q psy259 134 GVKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav 210 (398)
+..+++|+|+- .|+|+|+ .|.. .-..++.+|-++||+|+| ++|. .|.+|+..+..+.
T Consensus 74 ~y~d~~ell~~~~iDaV~I~-------tP~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 133 (350)
T 4had_A 74 AFGSYEEMLASDVIDAVYIP-------LPTS----QHIEWSIKAADAGKHVVC---------EKPLALKAGDIDAVIAAR 133 (350)
T ss_dssp EESSHHHHHHCSSCSEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCCCSSGGGGHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEe-------CCCc----hhHHHHHHHHhcCCEEEE---------eCCcccchhhHHHHHHHH
Confidence 35689999975 7999997 2433 234567788899999998 7775 6777887777765
Q ss_pred HhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 211 LDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 211 ~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
..- ..+..-+..-. -+| .++.+.+++.+
T Consensus 134 ~~~-~~~l~v~~~~R-~~p--~~~~~k~~i~~ 161 (350)
T 4had_A 134 DRN-KVVVTEAYMIT-YSP--VWQKVRSLIDE 161 (350)
T ss_dssp HHH-TCCEEECCGGG-GSH--HHHHHHHHHHT
T ss_pred HHc-CCceeEeeeee-cCH--HHHHhhHhhhc
Confidence 432 23333332211 123 56677776653
No 195
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=34.21 E-value=2.8e+02 Score=26.20 Aligned_cols=115 Identities=14% Similarity=0.151 Sum_probs=70.6
Q ss_pred CcccEEEeecChHHHhcHHHHHHh-cCeeEEc--CCCC----CCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhh
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE-ADGIMVA--RGDL----GIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMI 193 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~-sDgimva--RgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi 193 (398)
.++.+.+-..+..+ ++.-++. .|.|.|. -.|+ -+....++.....+.+++.+++.|+.|-..=-+ ..
T Consensus 73 ~~~~~~~l~~~~~~---i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~---~~ 146 (307)
T 1ydo_A 73 KGVTYAALVPNQRG---LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLST---VF 146 (307)
T ss_dssp TTCEEEEECCSHHH---HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC---TT
T ss_pred CCCeEEEEeCCHHh---HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---Ee
Confidence 45555555555444 4444444 6766553 2332 223445777788889999999999998532000 01
Q ss_pred cCCC---CCchhhhhHHHH-HHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 194 KKPR---ATRAEISDVANA-VLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 194 ~~~~---PtraEvsDVana-v~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.+|. -+..++-+++.+ ...|+|.|.|. +|.=...|-+.-+.+..+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 147 GCPYEKDVPIEQVIRLSEALFEFGISELSLG-DTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CSSCCCCHHHHHHHHHHHHTT
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-CCCCCcCHHHHHHHHHHHHHh
Confidence 2232 234455555544 46799999997 787788999887777776553
No 196
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=34.03 E-value=1.5e+02 Score=26.27 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=42.2
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChH-HHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEE
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQ-GVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVI 183 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~-~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 183 (398)
=+..+.+. +.+.|-++.+..-=.+.+ -.+.++.++.. .|||++...|- + .-...++++.+.|.||+
T Consensus 23 ~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~------~----~~~~~~~~~~~~~iPvV 90 (291)
T 3l49_A 23 AYQAQIAE--IERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL------D----VLNPWLQKINDAGIPLF 90 (291)
T ss_dssp HHHHHHHH--HHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH------H----HHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHH--HHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh------h----hhHHHHHHHHHCCCcEE
Confidence 34566666 777777666653222222 24455666555 89999985541 1 22345778889999999
Q ss_pred Ee
Q psy259 184 CA 185 (398)
Q Consensus 184 ~A 185 (398)
+.
T Consensus 91 ~~ 92 (291)
T 3l49_A 91 TV 92 (291)
T ss_dssp EE
T ss_pred Ee
Confidence 84
No 197
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=33.91 E-value=1.7e+02 Score=32.50 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=50.0
Q ss_pred cccEEEee---cChHHHhcHHHHHHh--cCeeEEcCC--------CCCCCCChhhHHHHHHHHHHHHHHc-CCCEEEeeh
Q psy259 122 HIKIIAKI---ENHQGVKNLDEIIAE--ADGIMVARG--------DLGIEIPPWKVFLAQKQMIAKCNKV-GKPVICATQ 187 (398)
Q Consensus 122 ~~~iiaKI---E~~~~v~n~deIl~~--sDgimvaRg--------DLg~e~~~~~v~~~qk~ii~~c~~~-gkpvi~ATQ 187 (398)
+..+++-| .+++.....-+.++. +|+|-|.=| ++|..+. .-+..-.++++..+++ ++||++=
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~--~~~~~~~~iv~~v~~~~~~Pv~vK-- 709 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACG--QDPELVRNICRWVRQAVQIPFFAK-- 709 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGG--GCHHHHHHHHHHHHHHCSSCEEEE--
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccc--cCHHHHHHHHHHHHHhhCCceEEE--
Confidence 34566655 345555555444432 799998522 2232221 2244555677777765 8999972
Q ss_pred hhHHhhcCCCCCchhhhhHHHH-HHhCCcEEEec
Q psy259 188 MLESMIKKPRATRAEISDVANA-VLDGADCVMLS 220 (398)
Q Consensus 188 mLeSMi~~~~PtraEvsDVana-v~dG~D~vmLS 220 (398)
-+|+-.++.+++.+ ...|+|+|.+|
T Consensus 710 --------~~~~~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 710 --------LTPNVTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp --------ECSCSSCHHHHHHHHHHHTCSEEEEC
T ss_pred --------eCCChHHHHHHHHHHHHcCCCEEEEe
Confidence 24544455666555 46799999995
No 198
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=33.88 E-value=30 Score=29.56 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=25.8
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|-| .+|||++|.++.
T Consensus 87 ~~d~~i~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 125 (187)
T 3sho_A 87 PTDLMIGVSVWRYLRDTVAALAGAAER-GVPTMALTDSSV 125 (187)
T ss_dssp TTEEEEEECCSSCCHHHHHHHHHHHHT-TCCEEEEESCTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 457889999999987543 4444 699999998653
No 199
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=33.80 E-value=90 Score=26.75 Aligned_cols=55 Identities=16% Similarity=0.072 Sum_probs=42.3
Q ss_pred hHHHhcHHHHHHh---cCeeEEc--CCCC----CCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 132 HQGVKNLDEIIAE---ADGIMVA--RGDL----GIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 132 ~~~v~n~deIl~~---sDgimva--RgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
...+.+++.+++. .|.|+|. --|+ .-..+.+.+....+.+++.+++.|..+++.|
T Consensus 57 ~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 57 RWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 5677788888764 6766654 4488 4567788888888999999999998888754
No 200
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=33.52 E-value=66 Score=30.68 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=45.9
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHH-----------hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHH
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIA-----------EADGIMVARGDLGIEIPPWKVFLAQKQMIAKC 175 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~-----------~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c 175 (398)
+..+++. |.+.+.++.|.+--++....+|++++++ -.|.|+-+-.+ +.....|-+.|
T Consensus 91 a~aa~~~--L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn----------~~~R~~in~~c 158 (292)
T 3h8v_A 91 VQAAEHT--LRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN----------FEARMTINTAC 158 (292)
T ss_dssp HHHHHHH--HHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS----------HHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc----------hhhhhHHHHHH
Confidence 4556666 6666888888887666666677887763 36777655222 23445688899
Q ss_pred HHcCCCEEEe
Q psy259 176 NKVGKPVICA 185 (398)
Q Consensus 176 ~~~gkpvi~A 185 (398)
.+.|||.+.+
T Consensus 159 ~~~~~Pli~~ 168 (292)
T 3h8v_A 159 NELGQTWMES 168 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHhCCCEEEe
Confidence 9999999853
No 201
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=33.50 E-value=1.3e+02 Score=27.47 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=43.9
Q ss_pred HHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 108 RLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 108 ~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+++. +.+.+.++.|.+--+... -+|++++++-.|.|+-+-.++ .....+.+.|.+.|+|+|.+
T Consensus 85 ~~~~~~--l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 85 QVSQQR--LTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDNM----------ATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHH--HHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSSH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH--HHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCCH----------HHHHHHHHHHHHhCCCEEEE
Confidence 445555 555566666665433322 257889999999998774322 24567888999999999875
No 202
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=33.41 E-value=3e+02 Score=25.70 Aligned_cols=115 Identities=12% Similarity=0.058 Sum_probs=69.7
Q ss_pred CcccEEEeecChHHHhcHHHHHHh-cCeeEEc-CC-CC----CCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhh
Q psy259 121 KHIKIIAKIENHQGVKNLDEIIAE-ADGIMVA-RG-DL----GIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMI 193 (398)
Q Consensus 121 ~~~~iiaKIE~~~~v~n~deIl~~-sDgimva-Rg-DL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi 193 (398)
.++.+.+-+.+.+ .++.-++. .|.|+|. .. |+ -+..+.++....-+++++.|+++|+.|-..=-+ ..
T Consensus 75 ~~~~~~~l~~~~~---~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~---~~ 148 (302)
T 2ftp_A 75 PGVTYAALAPNLK---GFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISC---VL 148 (302)
T ss_dssp TTSEEEEECCSHH---HHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC---TT
T ss_pred CCCEEEEEeCCHH---HHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEE---Ee
Confidence 4566655554443 33334444 7888873 11 31 122577888888899999999999998421000 01
Q ss_pred cCC---CCCchhhhhHHH-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 194 KKP---RATRAEISDVAN-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 194 ~~~---~PtraEvsDVan-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.++ +-+..++-+++. +..-|+|.+.|. .|.=...|-+.-+.+..+.+.
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLG-DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-ESSSCCCHHHHHHHHHHHTTT
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCCcCHHHHHHHHHHHHHh
Confidence 112 222334445444 336899999998 666667898877777776553
No 203
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=33.34 E-value=1.9e+02 Score=26.81 Aligned_cols=87 Identities=6% Similarity=-0.004 Sum_probs=55.2
Q ss_pred HHHHhhchhcCC-cccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeeh
Q psy259 110 IEKLMATGEQGK-HIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQ 187 (398)
Q Consensus 110 ir~~~~l~~~~~-~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQ 187 (398)
+|+. |.. |. .+.....+.+++.++. .... .|.+++..-|-..+ .+ .++. .+..+...|+|+++=+.
T Consensus 9 ~k~~--l~~-g~~~~g~~~~~~~p~~~e~---a~~~GaD~v~lDlE~~~~~--~~---~~~~-~~~a~~~~~~~~~VRv~ 76 (267)
T 2vws_A 9 FKER--LRK-GEVQIGLWLSSTTAYMAEI---AATSGYDWLLIDGEHAPNT--IQ---DLYH-QLQAVAPYASQPVIRPV 76 (267)
T ss_dssp HHHH--HHT-TCCEEEEEECSCCHHHHHH---HHTTCCSEEEEETTTSCCC--HH---HHHH-HHHHHTTSSSEEEEECS
T ss_pred HHHH--HHC-CCCEEEEEEeCCCHHHHHH---HHhCCCCEEEEcCCCCCCC--HH---HHHH-HHHHHHhCCCcEEEEeC
Confidence 5555 543 54 5788888887765532 2233 79999998885322 22 2222 23444557899998542
Q ss_pred hhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 188 MLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 188 mLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
. .+-.|+..++..|+|+||+.
T Consensus 77 ---------~---~~~~~i~~~l~~g~~~I~~P 97 (267)
T 2vws_A 77 ---------E---GSKPLIKQVLDIGAQTLLIP 97 (267)
T ss_dssp ---------S---CCHHHHHHHHHTTCCEEEEC
T ss_pred ---------C---CCHHHHHHHHHhCCCEEEeC
Confidence 1 12368888888899999995
No 204
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=33.09 E-value=2.5e+02 Score=24.57 Aligned_cols=113 Identities=14% Similarity=0.080 Sum_probs=58.5
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHH-hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIA-EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~-~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.++|++ .. ...+..-+.+.+-+ .+..+ -+|.|+++..--+...|-.. +.--..+-+.++..+.|++.
T Consensus 100 ~~~~~~~~--~~----~~~ig~sv~t~~~~---~~a~~~gaD~i~~~~~f~~~~~~g~~-~~~~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 100 SPKQIRAR--FP----HLHIGRSVHSLEEA---VQAEKEDADYVLFGHVFETDCKKGLE-GRGVSLLSDIKQRISIPVIA 169 (221)
T ss_dssp CHHHHHHH--CT----TCEEEEEECSHHHH---HHHHHTTCSEEEEECCC-----------CHHHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHH--CC----CCEEEEEcCCHHHH---HHHHhCCCCEEEECCccccCCCCCCC-CCCHHHHHHHHHhCCCCEEE
Confidence 35777777 42 33444445443322 22222 28999997631111111000 11112222233445899987
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
+- .. +. .++..++.-|+|+|.+++---..+.|.++++.+.+.++
T Consensus 170 ~G---------GI-~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 170 IG---------GM-TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp ES---------SC-CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred EC---------CC-CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 42 22 32 46788888899999997654434457777776655443
No 205
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=32.50 E-value=1.6e+02 Score=27.50 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=70.9
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|++.|.++++- .|..+...-+...-..|++.+...++. .| -++++...++.++- ..++
T Consensus 79 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~-~~~~- 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGEL---GM-KGAVEKALEISRET-GAHM- 141 (303)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHH-CCBC-
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHhc-CeEe-
Confidence 4567788999999873 233233345566777899988765421 12 35555444443322 1110
Q ss_pred hHHHHHHhhcCCCCCChHHH---HHHHHHHHHHhcC--CcEEEEECCCchHHHHHHh----hCCC-CCEEEEeCChh
Q psy259 250 TKLLTELKSMLPLPIDSAHS---VAIAAVEAASKVF--AGAIVVLTTTGTSARLISK----YRPR-CPIISVTRFPQ 316 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~---ia~aav~~A~~~~--A~aIIv~T~SG~tA~~iSk----yRP~-~PIIAVT~n~~ 316 (398)
...-.++... -...+.++..+++ .++|++.+-+|.++.-+++ ..|. ..|++|.+...
T Consensus 142 ----------~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 142 ----------LNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp ----------CCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 0001122211 1223567777764 7999999999999866664 3588 99999988553
No 206
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=32.41 E-value=55 Score=30.21 Aligned_cols=118 Identities=19% Similarity=0.086 Sum_probs=68.5
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHH------HHh-cCeeEEcCCCCCCCCC------hhhHHHHHHHHHH
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEI------IAE-ADGIMVARGDLGIEIP------PWKVFLAQKQMIA 173 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deI------l~~-sDgimvaRgDLg~e~~------~~~v~~~qk~ii~ 173 (398)
|...++. |+ | ++|.+-|==|.|-.+.+.. ++. +|.| |+.+.++ .+.+..-.+.+.+
T Consensus 41 v~~a~~~--l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI-----D~Vinig~~~~g~~~~v~~ei~~v~~ 109 (226)
T 1vcv_A 41 APVVRPL--LR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADEI-----DVVAPIGLVKSRRWAEVRRDLISVVG 109 (226)
T ss_dssp HHHHGGG--CS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE-----EEECCHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHH--hC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE-----EEecchhhhcCCCHHHHHHHHHHHHH
Confidence 4566666 63 2 7777766444433333322 333 4444 1222222 2556666667777
Q ss_pred HHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHH-HHHhCCcEEEecCccC----------CCCChHHHHHHHHHHHHH
Q psy259 174 KCNKVGKPVICATQMLESMIKKPRATRAEISDVAN-AVLDGADCVMLSGETA----------KGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 174 ~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVan-av~dG~D~vmLS~ETA----------~G~yP~eaV~~m~~I~~~ 242 (398)
.|...+-|||+.|-.| |..|+...+. ++.-|+|.|=-|.--. .|.--+|.|+.|++.+++
T Consensus 110 a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~ 180 (226)
T 1vcv_A 110 AAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE 180 (226)
T ss_dssp HTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 7766677899876666 5566544443 3457999998762211 233457899999988775
Q ss_pred HH
Q psy259 243 AE 244 (398)
Q Consensus 243 aE 244 (398)
+-
T Consensus 181 ~g 182 (226)
T 1vcv_A 181 KG 182 (226)
T ss_dssp HT
T ss_pred hC
Confidence 44
No 207
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.24 E-value=1.7e+02 Score=22.50 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=40.6
Q ss_pred HHHHHHhcCCcEEEEECC----CchH-HHHHHh--hCCCCCEEEEeCChhhhhh--ccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVLTT----TGTS-ARLISK--YRPRCPIISVTRFPQVARQ--LHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T~----SG~t-A~~iSk--yRP~~PIIAVT~n~~taRq--L~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.||+-.. +|.. .+.+.+ ..|.+|||.+|........ ..+..|+.-++.++.
T Consensus 42 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~ 112 (140)
T 3grc_A 42 ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPI 112 (140)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCC
Confidence 344445567787776432 3433 345555 5689999999998765432 567779998888753
No 208
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=32.14 E-value=1.9e+02 Score=27.51 Aligned_cols=80 Identities=21% Similarity=0.211 Sum_probs=46.4
Q ss_pred cccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCC-hhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIP-PWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~-~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt 199 (398)
.++++.++-+.+-... ..+. +|+|.+--.+.|-..+ ...+. .-+++ ....+.|||.+-- .=+
T Consensus 124 g~~v~~~v~s~~~a~~---a~~~GaD~i~v~g~~~GG~~G~~~~~~-ll~~i---~~~~~iPviaaGG---------I~~ 187 (326)
T 3bo9_A 124 GTKVIPVVASDSLARM---VERAGADAVIAEGMESGGHIGEVTTFV-LVNKV---SRSVNIPVIAAGG---------IAD 187 (326)
T ss_dssp TCEEEEEESSHHHHHH---HHHTTCSCEEEECTTSSEECCSSCHHH-HHHHH---HHHCSSCEEEESS---------CCS
T ss_pred CCcEEEEcCCHHHHHH---HHHcCCCEEEEECCCCCccCCCccHHH-HHHHH---HHHcCCCEEEECC---------CCC
Confidence 5788888877655443 3344 8999993212222111 11221 11122 2345899998532 111
Q ss_pred chhhhhHHHHHHhCCcEEEec
Q psy259 200 RAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 200 raEvsDVanav~dG~D~vmLS 220 (398)
..|++.++..|+|+|+++
T Consensus 188 ---~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 188 ---GRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp ---HHHHHHHHHHTCSEEEES
T ss_pred ---HHHHHHHHHhCCCEEEec
Confidence 358899999999999995
No 209
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.12 E-value=1.7e+02 Score=22.46 Aligned_cols=56 Identities=18% Similarity=0.166 Sum_probs=36.1
Q ss_pred HhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 279 SKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 279 ~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
.+...+.|++-- .+|.. .+.+.+..|.+|||.+|...... ..-.+-.|+.-++.++
T Consensus 46 ~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp 107 (133)
T 3b2n_A 46 EEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKE 107 (133)
T ss_dssp HHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT
T ss_pred hhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEECC
Confidence 344567666532 34543 45666667999999999866532 2234557888888775
No 210
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=32.10 E-value=1.8e+02 Score=26.38 Aligned_cols=107 Identities=10% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHHHHHhhchhcCCcccEEEee-cChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEE
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKI-ENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVI 183 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKI-E~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 183 (398)
.++++|+. . ++.++.+. .++.-...++...++ +||+++ .|+..+ .-+++++.|+++|.+.+
T Consensus 85 ~i~~ir~~--~-----~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v--~d~~~~--------~~~~~~~~~~~~g~~~i 147 (262)
T 1rd5_A 85 MLREVTPE--L-----SCPVVLLSYYKPIMFRSLAKMKEAGVHGLIV--PDLPYV--------AAHSLWSEAKNNNLELV 147 (262)
T ss_dssp HHHHHGGG--C-----SSCEEEECCSHHHHSCCTHHHHHTTCCEEEC--TTCBTT--------THHHHHHHHHHTTCEEC
T ss_pred HHHHHHhc--C-----CCCEEEEecCcHHHHHHHHHHHHcCCCEEEE--cCCChh--------hHHHHHHHHHHcCCceE
Q ss_pred EeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCC------CChHHHHHHHHHHHHH
Q psy259 184 CATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKG------DYPVECVRAMHNTCKE 242 (398)
Q Consensus 184 ~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G------~yP~eaV~~m~~I~~~ 242 (398)
.. .........+.....++.+.+.+ .|..| .+|....+.+.++.+.
T Consensus 148 ~~-----------~a~~t~~e~~~~~~~~~~g~v~~--~s~~G~tG~~~~~~~~~~~~i~~v~~~ 199 (262)
T 1rd5_A 148 LL-----------TTPAIPEDRMKEITKASEGFVYL--VSVNGVTGPRANVNPRVESLIQEVKKV 199 (262)
T ss_dssp EE-----------ECTTSCHHHHHHHHHHCCSCEEE--ECSSCCBCTTSCBCTHHHHHHHHHHHH
T ss_pred EE-----------ECCCCCHHHHHHHHhcCCCeEEE--ecCCCCCCCCcCCCchHHHHHHHHHhh
No 211
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=32.02 E-value=86 Score=29.42 Aligned_cols=85 Identities=15% Similarity=0.207 Sum_probs=53.6
Q ss_pred HHhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHH
Q psy259 134 GVKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav 210 (398)
...+++++++ ..|.|+|+= |... ...++.+|-++||+|+| ++| ..+.+|...+..+.
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~t-------p~~~----h~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a 114 (329)
T 3evn_A 55 AYDKLEDMLADESIDVIYVAT-------INQD----HYKVAKAALLAGKHVLV---------EKPFTLTYDQANELFALA 114 (329)
T ss_dssp EESCHHHHHTCTTCCEEEECS-------CGGG----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEECC-------CcHH----HHHHHHHHHHCCCeEEE---------ccCCcCCHHHHHHHHHHH
Confidence 3568899998 589999872 3322 23456678899999998 777 56778887777766
Q ss_pred HhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 211 LDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 211 ~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
... ..++..+.. .--+| +++.+.+++.+
T Consensus 115 ~~~-~~~~~v~~~-~r~~p--~~~~~~~~i~~ 142 (329)
T 3evn_A 115 ESC-NLFLMEAQK-SVFIP--MTQVIKKLLAS 142 (329)
T ss_dssp HHT-TCCEEEECS-SCSSH--HHHHHHHHHHT
T ss_pred HHc-CCEEEEEEc-ccCCH--HHHHHHHHHhC
Confidence 543 333332221 11224 56677776653
No 212
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=32.01 E-value=2.1e+02 Score=27.40 Aligned_cols=144 Identities=18% Similarity=0.152 Sum_probs=0.0
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC------------------CCchhhhhHHHHHHhCCc
Q psy259 154 DLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR------------------ATRAEISDVANAVLDGAD 215 (398)
Q Consensus 154 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~------------------PtraEvsDVanav~dG~D 215 (398)
|+++ +.++.-..-.++++++|++.|--.+|-..-.=....... |+..-+..+..|+.+|||
T Consensus 63 DhTl-L~p~~T~~dI~~lc~eA~~~g~aaVCV~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 141 (288)
T 3oa3_A 63 DHTQ-LSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGAS 141 (288)
T ss_dssp EEEC-CCTTCCHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCS
T ss_pred Cccc-CCCCCCHHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCC
Q ss_pred EEEecCccCC---CCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCC
Q psy259 216 CVMLSGETAK---GDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTT 292 (398)
Q Consensus 216 ~vmLS~ETA~---G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~S 292 (398)
.|-.-=--.. |+|. +..+-+..+.+.+.... +.-......-..+.+.. |+++|.+.+|+ +|=|.|
T Consensus 142 EIDmVINig~lk~g~~~-~v~~eI~~V~~a~~~~~--------lKVIlEt~~Lt~eei~~-A~~ia~eaGAD--fVKTST 209 (288)
T 3oa3_A 142 ELDMVMNYPWLSEKRYT-DVFQDIRAVRLAAKDAI--------LKVILETSQLTADEIIA-GCVLSSLAGAD--YVKTST 209 (288)
T ss_dssp EEEEECCHHHHHTTCHH-HHHHHHHHHHHHTTTSE--------EEEECCGGGCCHHHHHH-HHHHHHHTTCS--EEECCC
T ss_pred EEEEEeehhhhcCCcHH-HHHHHHHHHHHHhcCCC--------ceEEEECCCCCHHHHHH-HHHHHHHcCCC--EEEcCC
Q ss_pred ch--------HHHHHHhh----CCCCCEEE
Q psy259 293 GT--------SARLISKY----RPRCPIIS 310 (398)
Q Consensus 293 G~--------tA~~iSky----RP~~PIIA 310 (398)
|. ..+++.+. .+++||.|
T Consensus 210 Gf~~~GAT~edv~lmr~~v~~~g~~v~VKA 239 (288)
T 3oa3_A 210 GFNGPGASIENVSLMSAVCDSLQSETRVKA 239 (288)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCceEEE
No 213
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=31.95 E-value=1.1e+02 Score=28.85 Aligned_cols=85 Identities=16% Similarity=0.210 Sum_probs=54.5
Q ss_pred HHhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHH
Q psy259 134 GVKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav 210 (398)
...+++++++ ..|.|+|+ .|... ...++..|-++||+|+| ++| ..+.+|...+..+.
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~~gk~vl~---------EKP~~~~~~e~~~l~~~a 114 (330)
T 3e9m_A 55 AYGSYEELCKDETIDIIYIP-------TYNQG----HYSAAKLALSQGKPVLL---------EKPFTLNAAEAEELFAIA 114 (330)
T ss_dssp CBSSHHHHHHCTTCSEEEEC-------CCGGG----HHHHHHHHHHTTCCEEE---------CSSCCSSHHHHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEc-------CCCHH----HHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 3468899998 68999997 23332 23456678899999998 677 66778888877776
Q ss_pred HhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 211 LDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 211 ~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
... ..++.-+-.- --+| +++.+.+++.+
T Consensus 115 ~~~-g~~~~v~~~~-r~~p--~~~~~k~~i~~ 142 (330)
T 3e9m_A 115 QEQ-GVFLMEAQKS-VFLP--ITQKVKATIQE 142 (330)
T ss_dssp HHT-TCCEEECCSG-GGCH--HHHHHHHHHHT
T ss_pred HHc-CCeEEEEEhh-hhCH--HHHHHHHHHhC
Confidence 553 2333322211 1234 56667776653
No 214
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.91 E-value=61 Score=31.14 Aligned_cols=131 Identities=13% Similarity=0.142 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchh-hhhHHHHHHhC--CcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 169 KQMIAKCNKVGKPVICATQMLESMIKKPRATRAE-ISDVANAVLDG--ADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 169 k~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraE-vsDVanav~dG--~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
+..++++++.|.|+++. .+.+.+ ...+..++..| +|++-+. ++.| +|....+.+..+.+....
T Consensus 84 ~~~i~~~~~~g~~v~v~-----------~g~~~~~~~~a~~~~~~g~~~~~i~i~--~~~G-~~~~~~~~i~~lr~~~~~ 149 (336)
T 1ypf_A 84 ISFIRDMQSRGLIASIS-----------VGVKEDEYEFVQQLAAEHLTPEYITID--IAHG-HSNAVINMIQHIKKHLPE 149 (336)
T ss_dssp HHHHHHHHHTTCCCEEE-----------ECCSHHHHHHHHHHHHTTCCCSEEEEE--CSSC-CSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCCeEEEe-----------CCCCHHHHHHHHHHHhcCCCCCEEEEE--CCCC-CcHHHHHHHHHHHHhCCC
Confidence 44567788889888763 122222 23334455667 8888763 3456 666666666555543211
Q ss_pred hhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCch---------------HHHHHHhh--CCCCCE
Q psy259 246 AIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTTGT---------------SARLISKY--RPRCPI 308 (398)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~SG~---------------tA~~iSky--RP~~PI 308 (398)
... ........ ..++.+.+.+|++|++-...|+ +...+... .-++||
T Consensus 150 ~~v-----------i~G~v~s~-----e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipV 213 (336)
T 1ypf_A 150 SFV-----------IAGNVGTP-----EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPI 213 (336)
T ss_dssp SEE-----------EEEEECSH-----HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCE
T ss_pred CEE-----------EECCcCCH-----HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcE
Confidence 000 00000111 2345566779999988544433 33333322 127999
Q ss_pred EE---EeCChhhhhhccccccceEEe
Q psy259 309 IS---VTRFPQVARQLHLHRSIIPLV 331 (398)
Q Consensus 309 IA---VT~n~~taRqL~L~wGV~Pvl 331 (398)
|+ +.+-..+++-|.| |.--+.
T Consensus 214 Ia~GGI~~g~Dv~kalal--GAdaV~ 237 (336)
T 1ypf_A 214 IADGGIRTNGDVAKSIRF--GATMVM 237 (336)
T ss_dssp EEESCCCSTHHHHHHHHT--TCSEEE
T ss_pred EEeCCCCCHHHHHHHHHc--CCCEEE
Confidence 98 3445566666654 444433
No 215
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=31.90 E-value=88 Score=28.52 Aligned_cols=49 Identities=20% Similarity=0.098 Sum_probs=33.5
Q ss_pred cCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 178 VGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 178 ~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
.+.|||.. ...-|. .|+..+...|+|+|+.. |+..+ |-+..+.+.+..+
T Consensus 180 ~~ipvIA~---------GGI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~~i~ 228 (232)
T 3igs_A 180 AGCRVIAE---------GRYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYNDALK 228 (232)
T ss_dssp TTCCEEEE---------SCCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHHHHH
T ss_pred cCCcEEEE---------CCCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHHHHH
Confidence 38999973 334343 47788888899999995 56555 7666666655443
No 216
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=31.90 E-value=77 Score=30.08 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=55.0
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++. .|.|+|+- |... -..++.+|-++||+|+| ++| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~i~t-------p~~~----H~~~~~~al~aGkhV~~---------EKPla~~~~e~~~l~~~a~ 115 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVIPT-------PNDT----HFPLAQSALAAGKHVVV---------DKPFTVTLSQANALKEHAD 115 (352)
T ss_dssp ESCHHHHHHCSSCCEEEECS-------CTTT----HHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEeC-------ChHH----HHHHHHHHHHCCCcEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4689999986 89999972 2222 13456778899999998 788 688888888887776
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
..-=.+|. +..- --+| .++.+.+++.+
T Consensus 116 ~~g~~~~v-~~~~-r~~p--~~~~~~~~i~~ 142 (352)
T 3kux_A 116 DAGLLLSV-FHNR-RWDS--DFLTLKTLLAE 142 (352)
T ss_dssp HTTCCEEE-CCGG-GGCH--HHHHHHHHHHH
T ss_pred HcCCeEEE-Eeec-ccCH--HHHHHHHHHhc
Confidence 53222333 2111 1124 56667776654
No 217
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=31.66 E-value=3.3e+02 Score=27.78 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=34.3
Q ss_pred cccccceeEEEeCCCCCCHH--HHHHHHHhcccccc--cCCCC
Q psy259 47 SYVRLTGIICTIGPASVAVD--MLEKIIETESNSDE--CSEKP 85 (398)
Q Consensus 47 ~~~r~t~Iictigp~~~~~e--~l~~~i~~Gmnvr~--~~~~~ 85 (398)
...|+|||||||||+|+++| +|++|+++ |||-+ |||+.
T Consensus 12 ~~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~ 53 (461)
T 3qtg_A 12 RARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHAS 53 (461)
T ss_dssp CCSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCC
T ss_pred hccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCC
Confidence 35799999999999999999 99999999 99944 99973
No 218
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=31.63 E-value=1.1e+02 Score=29.43 Aligned_cols=115 Identities=13% Similarity=0.125 Sum_probs=70.2
Q ss_pred cccEEEeecChHHHhcHHHHHHh-cCeeEEc--CCCC----CCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhc
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE-ADGIMVA--RGDL----GIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIK 194 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~-sDgimva--RgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~ 194 (398)
++.+.+-.=+.. .++..++. .|.|-|. -.|+ -+....++.....+.+++.|+++|+.|.+.... .-.
T Consensus 89 ~~~i~~l~~~~~---~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~ 162 (337)
T 3ble_A 89 RIEILGFVDGNK---TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSN 162 (337)
T ss_dssp GEEEEEESSTTH---HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHH
T ss_pred CCeEEEEccchh---hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCC
Confidence 455655554444 45555554 5665442 2221 112345666777788999999999998875332 100
Q ss_pred CCCCCchhhhhHHHHH-HhCCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 195 KPRATRAEISDVANAV-LDGADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 195 ~~~PtraEvsDVanav-~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
.++-+...+-+++.++ ..|+|.|.|. +|.=...|.+.-+....+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 163 GFRNSPDYVKSLVEHLSKEHIERIFLP-DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHCHHHHHHHHHHHHTSCCSEEEEE-CTTCCCCHHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHHcCCCEEEEe-cCCCCcCHHHHHHHHHHHHHhc
Confidence 1222334455666644 4599999996 6777788988888777776543
No 219
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=31.61 E-value=1.7e+02 Score=25.82 Aligned_cols=78 Identities=21% Similarity=0.350 Sum_probs=46.4
Q ss_pred CcccHHHHHHHHHHhhchhcCCcccEEEeecChHH-HhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy259 100 PNLYESNVRLIEKLMATGEQGKHIKIIAKIENHQG-VKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK 177 (398)
Q Consensus 100 ~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~-v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~ 177 (398)
+-.|..=+..+.+. +.+.|.++.+..-=++.+. .+.++.+++- .|||++...+-...-+.. ..++.+.+
T Consensus 27 ~~~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~-------~~~~~~~~ 97 (298)
T 3tb6_A 27 DYIFPSIIRGIESY--LSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNI-------GYYLNLEK 97 (298)
T ss_dssp STTHHHHHHHHHHH--HHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTH-------HHHHHHHH
T ss_pred chHHHHHHHHHHHH--HHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcH-------HHHHHHHh
Confidence 33443344566666 7777777666543333332 3445555554 899999876643222222 24566788
Q ss_pred cCCCEEEee
Q psy259 178 VGKPVICAT 186 (398)
Q Consensus 178 ~gkpvi~AT 186 (398)
.|.||++..
T Consensus 98 ~~iPvV~~~ 106 (298)
T 3tb6_A 98 NGIPFAMIN 106 (298)
T ss_dssp TTCCEEEES
T ss_pred cCCCEEEEe
Confidence 999999743
No 220
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=31.45 E-value=1.8e+02 Score=22.41 Aligned_cols=79 Identities=14% Similarity=0.207 Sum_probs=45.6
Q ss_pred HHHHHhcCCcEEEEECC----CchH-HHHHHh--hCCCCCEEEEeCChhhh-hhccccccceEEecCCCCCCCcccCHHH
Q psy259 275 VEAASKVFAGAIVVLTT----TGTS-ARLISK--YRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEPSPADWLRDVDT 346 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T~----SG~t-A~~iSk--yRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~~~~~w~~d~d~ 346 (398)
.+...+...+.||+-.. +|.. .+.+.+ ..|.+|||++|...... ..-.+-.|+.-++.++.. .++...
T Consensus 44 ~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~----~~~l~~ 119 (142)
T 3cg4_A 44 IDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFD----NEDLIE 119 (142)
T ss_dssp HHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCC----HHHHHH
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCC----HHHHHH
Confidence 34444556677666432 4433 455655 67899999999876543 333456788888876531 123344
Q ss_pred HHHHHHHHHHH
Q psy259 347 RVAHGIKYGRD 357 (398)
Q Consensus 347 ~I~~ai~~ake 357 (398)
.+..+++..+.
T Consensus 120 ~i~~~~~~~~~ 130 (142)
T 3cg4_A 120 KTTFFMGFVRN 130 (142)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 45555544433
No 221
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=31.37 E-value=17 Score=36.03 Aligned_cols=41 Identities=10% Similarity=0.056 Sum_probs=30.1
Q ss_pred CCcEEEEECCCchHHHHH-----HhhC-CCCCEEEEeCChh--hhhhcc
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYR-PRCPIISVTRFPQ--VARQLH 322 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyR-P~~PIIAVT~n~~--taRqL~ 322 (398)
.-+.+|++|.||.|+..+ +|-+ +.+++|++|+++. .+|...
T Consensus 108 ~~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD 156 (393)
T 3odp_A 108 EPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAK 156 (393)
T ss_dssp SCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGG
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhc
Confidence 346889999999998654 5554 5899999999653 455443
No 222
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=31.31 E-value=2.3e+02 Score=25.50 Aligned_cols=85 Identities=8% Similarity=0.067 Sum_probs=53.1
Q ss_pred HHHHHHHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCccc
Q psy259 272 IAAVEAASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLR 342 (398)
Q Consensus 272 ~aav~~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~ 342 (398)
...++.+.+.+++.||+-+.. |.++..+.+.- +||++.+-+.... ....+++.-. ...
T Consensus 79 ~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~-~~PVlvv~~~~~~--------~~~~Ilva~D----~s~ 145 (290)
T 3mt0_A 79 QTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFA-PCPVLMTKTARPW--------TGGKILAAVD----VGN 145 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHC-SSCEEEECCCSCS--------TTCEEEEEEC----TTC
T ss_pred HHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcC-CCCEEEecCCCCC--------CCCeEEEEEC----CCC
Confidence 344556667789999887752 67788777765 5999999754321 2233333221 123
Q ss_pred C-------HHHHHHHHHHHHHHcCCCCCCCeEEEEeccC
Q psy259 343 D-------VDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 374 (398)
Q Consensus 343 d-------~d~~I~~ai~~ake~Glik~GD~VVVvsG~~ 374 (398)
. .+..++++.+.++..| ..+.+++-+.
T Consensus 146 ~~~~~~~~s~~al~~a~~la~~~~-----a~l~ll~v~~ 179 (290)
T 3mt0_A 146 NDGEHRSLHAGIISHAYDIAGLAK-----ATLHVISAHP 179 (290)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEEEEC
T ss_pred cchhhhHHHHHHHHHHHHHHHHcC-----CeEEEEEEec
Confidence 3 5778888888887743 5566665543
No 223
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=31.09 E-value=1.9e+02 Score=28.16 Aligned_cols=90 Identities=19% Similarity=0.188 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCC--CCChhhHHHHHHHHHHHHH-Hc--
Q psy259 105 SNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGI--EIPPWKVFLAQKQMIAKCN-KV-- 178 (398)
Q Consensus 105 ddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~--e~~~~~v~~~qk~ii~~c~-~~-- 178 (398)
++|.++|+. . ++.++.|.=. ..+......+. +|+|.|+-. .|- .-+... -..+..+. ..
T Consensus 215 ~~i~~l~~~--~-----~~pv~vK~~~--~~e~a~~a~~~Gad~I~vs~~-ggr~~~~~~~~-----~~~l~~v~~~~~~ 279 (370)
T 1gox_A 215 KDVAWLQTI--T-----SLPILVKGVI--TAEDARLAVQHGAAGIIVSNH-GARQLDYVPAT-----IMALEEVVKAAQG 279 (370)
T ss_dssp HHHHHHHHH--C-----CSCEEEECCC--SHHHHHHHHHTTCSEEEECCG-GGTSSTTCCCH-----HHHHHHHHHHTTT
T ss_pred HHHHHHHHH--h-----CCCEEEEecC--CHHHHHHHHHcCCCEEEECCC-CCccCCCcccH-----HHHHHHHHHHhCC
Confidence 467777776 4 4678887532 12333333444 899999421 111 111111 11122222 23
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecC
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSG 221 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ 221 (398)
..|||.. ...-+ ..|+..++..|||+||+..
T Consensus 280 ~ipvia~---------GGI~~---~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 280 RIPVFLD---------GGVRR---GTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp SSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEECH
T ss_pred CCEEEEE---------CCCCC---HHHHHHHHHcCCCEEeecH
Confidence 5788863 22222 3599999999999999964
No 224
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=30.99 E-value=34 Score=29.25 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=25.4
Q ss_pred CCcEEEEECCCchHHHH-----HHhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARL-----ISKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~-----iSkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|... .+|-| .+|+|++|.++.
T Consensus 79 ~~d~vI~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 117 (186)
T 1m3s_A 79 EGDLVIIGSGSGETKSLIHTAAKAKSL-HGIVAALTINPE 117 (186)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CCCEEEEEcCCCCcHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 34688999999998644 33444 699999999753
No 225
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=30.98 E-value=1.4e+02 Score=28.34 Aligned_cols=134 Identities=13% Similarity=0.191 Sum_probs=77.9
Q ss_pred ceeEEEeCCCCC-----CHHHHHHHHHhcccc------cc-cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhc
Q psy259 52 TGIICTIGPASV-----AVDMLEKIIETESNS------DE-CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQ 119 (398)
Q Consensus 52 t~Iictigp~~~-----~~e~l~~~i~~Gmnv------r~-~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~ 119 (398)
.-||+ ||-+. ..+..+++.++|.+. |. |.+.|+ +..|..++-+ + -+..+.++++ ..+.
T Consensus 19 ~~vIA--Gpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~pr---ts~~sf~g~~--l-~~gl~~l~~~--~~~~ 88 (292)
T 1o60_A 19 FVLFG--GMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANR---SSIHSYRGPG--M-EEGLKIFQEL--KDTF 88 (292)
T ss_dssp CEEEE--EEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTC---SSTTSCCCSC--H-HHHHHHHHHH--HHHH
T ss_pred eEEEE--ecCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCC---CChHHhhhhh--H-HHHHHHHHHH--HHHc
Confidence 44666 77555 345566677777555 11 433221 1233222211 1 2245556666 4433
Q ss_pred CCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC
Q psy259 120 GKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 120 ~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt 199 (398)
.+.+++-+-+++.++-+.+ .+|.+-|+-+++- ..+ +++.+-+.||||++.|-|- -|
T Consensus 89 --Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~G~~--------~t 144 (292)
T 1o60_A 89 --GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKKPQF--------LS 144 (292)
T ss_dssp --CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEECCTT--------SC
T ss_pred --CCcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeCCCC--------CC
Confidence 5889998888887777665 5899999966552 222 5555568899999954432 25
Q ss_pred chhhhhHHHHHH-hCCcEEEe
Q psy259 200 RAEISDVANAVL-DGADCVML 219 (398)
Q Consensus 200 raEvsDVanav~-dG~D~vmL 219 (398)
-.|+-+.+..+. .|.+-++|
T Consensus 145 ~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 145 PSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp GGGHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEE
Confidence 557777777665 46643333
No 226
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=30.94 E-value=1e+02 Score=29.35 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=42.8
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++. .|.|+|+ .|.. ....++.+|-++||+|+| ++| ..+.+|+..+..+..
T Consensus 57 ~~~~~~ll~~~~vD~V~i~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMA-------GPPQ----LHFEMGLLAMSKGVNVFV---------EKPPCATLEELETLIDAAR 116 (359)
T ss_dssp ESSHHHHHHHSCCSEEEEC-------SCHH----HHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEc-------CCcH----HHHHHHHHHHHCCCeEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4688999986 5999997 2332 345667788899999998 777 567778777776665
Q ss_pred h
Q psy259 212 D 212 (398)
Q Consensus 212 d 212 (398)
.
T Consensus 117 ~ 117 (359)
T 3m2t_A 117 R 117 (359)
T ss_dssp H
T ss_pred H
Confidence 4
No 227
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=30.80 E-value=1.1e+02 Score=29.56 Aligned_cols=116 Identities=7% Similarity=0.072 Sum_probs=67.6
Q ss_pred ccceeEEEeCCCCCCHHHHHHHHHhccc-ccccCCCCCCCCC----CC-CCCCCCCCcccHHHHHHHHHHhhchhcCCcc
Q psy259 50 RLTGIICTIGPASVAVDMLEKIIETESN-SDECSEKPRECPS----EP-EPPHCKEPNLYESNVRLIEKLMATGEQGKHI 123 (398)
Q Consensus 50 r~t~Iictigp~~~~~e~l~~~i~~Gmn-vr~~~~~~~pgp~----~~-~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~ 123 (398)
++.+| +=+|--.--.|.++.|..+|.. +.-+..+.. .++ -. +.+.+-.. .-+..+++. |.+.+..+
T Consensus 35 ~~~~V-livG~GGlG~~ia~~La~~Gvg~itlvD~d~V-~~sNL~rq~~~~~~diG~----~Ka~~~~~~--l~~lnp~v 106 (346)
T 1y8q_A 35 RASRV-LLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV-TPEDPGAQFLIRTGSVGR----NRAEASLER--AQNLNPMV 106 (346)
T ss_dssp HTCEE-EEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-CSSCGGGCTTSCSSCTTS----BHHHHHHHH--HHHTCTTS
T ss_pred hCCeE-EEECCCHHHHHHHHHHHHcCCCEEEEEECCCc-chhhCCCCCccccccCcC----CHHHHHHHH--HHhHCCCe
Confidence 34433 3366656677889999999952 211111100 000 00 11111100 023455555 66667777
Q ss_pred cEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 124 KIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 124 ~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
.|-+--+.... +.++++.-.|.|+.+-.+ +..+..+-+.|+++++|+|.+
T Consensus 107 ~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 107 DVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp EEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 77776555443 567888889999887432 245667899999999999975
No 228
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=30.63 E-value=2.7e+02 Score=24.65 Aligned_cols=141 Identities=9% Similarity=0.042 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCccc-HHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHH
Q psy259 63 VAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLY-ESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEI 141 (398)
Q Consensus 63 ~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~-vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deI 141 (398)
+..|.++.+.++|.+.-.|--.- |+. . .++-+ .+-++++|+. . .....+--++.+++ +.++..
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~D--g~f---v----~~~~~~~~~~~~lr~~--~---~~~~~v~lmv~d~~--~~i~~~ 83 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMD--GHF---V----PNLTIGAPVIQSLRKH--T---KAYLDCHLMVTNPS--DYVEPL 83 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEB--SSS---S----SCBCBCHHHHHHHHTT--C---CSEEEEEEESSCGG--GGHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEec--CCc---C----cchhhCHHHHHHHHhh--c---CCcEEEEEEecCHH--HHHHHH
Confidence 44577888888887652211000 110 0 01111 2445666665 4 12334446777763 458888
Q ss_pred HHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHh---CCcEE
Q psy259 142 IAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLD---GADCV 217 (398)
Q Consensus 142 l~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~d---G~D~v 217 (398)
+++ +|||.+--+. .+.+ + ...++.+++.|+.++++. +|. |..| ...++.+ ++|.|
T Consensus 84 ~~agad~v~vH~~~--~~~~---~----~~~~~~i~~~g~~igv~~--------~p~-t~~e---~~~~~~~~~~~~d~v 142 (228)
T 1h1y_A 84 AKAGASGFTFHIEV--SRDN---W----QELIQSIKAKGMRPGVSL--------RPG-TPVE---EVFPLVEAENPVELV 142 (228)
T ss_dssp HHHTCSEEEEEGGG--CTTT---H----HHHHHHHHHTTCEEEEEE--------CTT-SCGG---GGHHHHHSSSCCSEE
T ss_pred HHcCCCEEEECCCC--cccH---H----HHHHHHHHHcCCCEEEEE--------eCC-CCHH---HHHHHHhcCCCCCEE
Confidence 887 8999766221 1111 0 245677788899999853 221 2122 1346667 99999
Q ss_pred EecC-c--cCCCCChHHHHHHHHHHH
Q psy259 218 MLSG-E--TAKGDYPVECVRAMHNTC 240 (398)
Q Consensus 218 mLS~-E--TA~G~yP~eaV~~m~~I~ 240 (398)
.+-+ + +..-+|+-+.++.++++.
T Consensus 143 l~~sv~pg~~g~~~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 143 LVMTVEPGFGGQKFMPEMMEKVRALR 168 (228)
T ss_dssp EEESSCTTCSSCCCCGGGHHHHHHHH
T ss_pred EEEeecCCCCcccCCHHHHHHHHHHH
Confidence 8821 1 112346655555554443
No 229
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=30.43 E-value=4e+02 Score=26.57 Aligned_cols=81 Identities=15% Similarity=0.218 Sum_probs=48.1
Q ss_pred cccEEEeecC-hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHhhcCCC
Q psy259 122 HIKIIAKIEN-HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESMIKKPR 197 (398)
Q Consensus 122 ~~~iiaKIE~-~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSMi~~~~ 197 (398)
...+.+-+.. .+..+.++.+++. .|+|.+.-+ .| .+ + .+..+++..++. ++||++-+ .
T Consensus 225 ~l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~-~G--~~-~----~~~e~i~~i~~~~p~~pvi~g~----------~ 286 (494)
T 1vrd_A 225 RLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTA-HG--HS-R----RVIETLEMIKADYPDLPVVAGN----------V 286 (494)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCS-CC--SS-H----HHHHHHHHHHHHCTTSCEEEEE----------E
T ss_pred hhccccccCcCHhHHHHHHHHHHhCCCEEEEEec-CC--ch-H----HHHHHHHHHHHHCCCceEEeCC----------c
Confidence 4455555543 4455667777776 799998422 11 11 2 223445555554 79998621 2
Q ss_pred CCchhhhhHHHHHHhCCcEEEecCcc
Q psy259 198 ATRAEISDVANAVLDGADCVMLSGET 223 (398)
Q Consensus 198 PtraEvsDVanav~dG~D~vmLS~ET 223 (398)
-| ..|...+...|+|+|.+|++.
T Consensus 287 ~t---~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 287 AT---PEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp CS---HHHHHHHHHTTCSEEEECSSC
T ss_pred CC---HHHHHHHHHcCCCEEEEcCCC
Confidence 22 234467778899999998764
No 230
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.42 E-value=2e+02 Score=22.67 Aligned_cols=61 Identities=11% Similarity=0.175 Sum_probs=38.4
Q ss_pred HHHHHhcCCcEEEEECC----Cch-HHHHHHhhCCCCCEEEEeCChhhhhhcc-cccc-ceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLTT----TGT-SARLISKYRPRCPIISVTRFPQVARQLH-LHRS-IIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T~----SG~-tA~~iSkyRP~~PIIAVT~n~~taRqL~-L~wG-V~Pvl~~~~ 335 (398)
.....+...+.||+-.. +|. ..+.+.+..|.+|||.+|.......... +-.| +.-++.++.
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~ 111 (154)
T 2rjn_A 44 LEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPW 111 (154)
T ss_dssp HHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSC
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCC
Confidence 34444556787776432 443 3456667779999999999876443333 3344 888777653
No 231
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=30.40 E-value=69 Score=28.76 Aligned_cols=71 Identities=18% Similarity=0.295 Sum_probs=43.3
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEeecChH-HHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcC
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKIENHQ-GVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVG 179 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~-~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~g 179 (398)
.|..=+..+.+. +.+.|-++.++.- .+.+ -.+.++.+++. .|||++.+.|. + .....++.+++.|
T Consensus 16 ~~~~~~~gi~~~--a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~------~----~~~~~~~~~~~~~ 82 (306)
T 8abp_A 16 WFQTEWKFADKA--GKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDP------K----LGSAIVAKARGYD 82 (306)
T ss_dssp HHHHHHHHHHHH--HHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCG------G----GHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH--HHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCc------h----hhHHHHHHHHHCC
Confidence 343334556666 6666766655543 3333 34556666655 89999986543 1 1233456778899
Q ss_pred CCEEEe
Q psy259 180 KPVICA 185 (398)
Q Consensus 180 kpvi~A 185 (398)
.||++.
T Consensus 83 iPvV~~ 88 (306)
T 8abp_A 83 MKVIAV 88 (306)
T ss_dssp CEEEEE
T ss_pred CcEEEe
Confidence 999973
No 232
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=30.25 E-value=80 Score=29.75 Aligned_cols=84 Identities=10% Similarity=0.059 Sum_probs=53.9
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav~ 211 (398)
..+++++++- .|.|+|+ .|.. ....++.+|-++||+|+| ++|. .+.+|+..+..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~I~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 115 (337)
T 3ip3_A 56 YNNWWEMLEKEKPDILVIN-------TVFS----LNGKILLEALERKIHAFV---------EKPIATTFEDLEKIRSVYQ 115 (337)
T ss_dssp CSSHHHHHHHHCCSEEEEC-------SSHH----HHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEe-------CCcc----hHHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 4688999985 8999998 3432 345678889999999998 7775 45677777766655
Q ss_pred h-CCcE-EEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 D-GADC-VMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 d-G~D~-vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
. |.-+ +|. +..- --+| +++.+.+++.+
T Consensus 116 ~~g~~~~~~v-~~~~-R~~p--~~~~~k~~i~~ 144 (337)
T 3ip3_A 116 KVRNEVFFTA-MFGI-RYRP--HFLTAKKLVSE 144 (337)
T ss_dssp HHTTTCCEEE-CCGG-GGSH--HHHHHHHHHHH
T ss_pred HhCCceEEEe-cccc-cCCH--HHHHHHHHHhc
Confidence 4 4332 222 2221 1223 56666666654
No 233
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.86 E-value=97 Score=29.68 Aligned_cols=85 Identities=12% Similarity=0.165 Sum_probs=55.0
Q ss_pred HHhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHH
Q psy259 134 GVKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav 210 (398)
...+++++++. .|.|+|+ .|.. ....++.+|-++||+|+| ++| ..+.+|+..+..+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AVSS----ERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CCHH----HHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CChH----HHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 34689999986 8999997 2332 345677889999999998 777 56788888887776
Q ss_pred HhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 211 LDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 211 ~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
.. ...+..-+..-.-.+| +++.+.+++.
T Consensus 136 ~~-~g~~l~v~~~~R~~~p--~~~~~k~~i~ 163 (361)
T 3u3x_A 136 AE-TGRIFSILYSEHFESP--ATVKAGELVA 163 (361)
T ss_dssp HT-TCCCEEEECHHHHTCH--HHHHHHHHHH
T ss_pred HH-cCCEEEEechHhhCCH--HHHHHHHHHH
Confidence 54 3333332221111124 5566666664
No 234
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=29.82 E-value=1.2e+02 Score=28.42 Aligned_cols=88 Identities=11% Similarity=0.061 Sum_probs=53.5
Q ss_pred hhhHHHHHHhCCcEEEecCccC-------CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcC--C--CCCChHHHHH
Q psy259 203 ISDVANAVLDGADCVMLSGETA-------KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSML--P--LPIDSAHSVA 271 (398)
Q Consensus 203 vsDVanav~dG~D~vmLS~ETA-------~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~--~--~~~~~~~~ia 271 (398)
..|+-.|+..|+|.|+++.-++ .+.=+-|.++.+.++++.+-+.-..-+ -++.... + ...++ .-+
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~--~~l~~~~~~e~~~~~~~--~~~ 157 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR--GYVSCVVECPYDGPVTP--QAV 157 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE--EEEECSSEETTTEECCH--HHH
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE--EEEEEEecCCcCCCCCH--HHH
Confidence 4688899999999999975444 355567788888888776654211000 0000000 0 01222 234
Q ss_pred HHHHHHHHhcCCcEEEEECCCch
Q psy259 272 IAAVEAASKVFAGAIVVLTTTGT 294 (398)
Q Consensus 272 ~aav~~A~~~~A~aIIv~T~SG~ 294 (398)
...++.+.+.+++.|-+..+.|.
T Consensus 158 ~~~~~~~~~~G~d~i~l~Dt~G~ 180 (295)
T 1ydn_A 158 ASVTEQLFSLGCHEVSLGDTIGR 180 (295)
T ss_dssp HHHHHHHHHHTCSEEEEEETTSC
T ss_pred HHHHHHHHhcCCCEEEecCCCCC
Confidence 45556667889999988887775
No 235
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=29.77 E-value=74 Score=31.24 Aligned_cols=85 Identities=21% Similarity=0.371 Sum_probs=56.3
Q ss_pred HHhcHHHHHHh-------cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhh
Q psy259 134 GVKNLDEIIAE-------ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISD 205 (398)
Q Consensus 134 ~v~n~deIl~~-------sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsD 205 (398)
...+++++++. .|.|+|+= |.. ....++.+|-++||+|+| ++| ..+.+|+..
T Consensus 93 ~~~~~~~ll~~~~~~~~~vD~V~I~t-------p~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~ 152 (417)
T 3v5n_A 93 VYSDFKEMAIREAKLKNGIEAVAIVT-------PNH----VHYAAAKEFLKRGIHVIC---------DKPLTSTLADAKK 152 (417)
T ss_dssp BCSCHHHHHHHHHHCTTCCSEEEECS-------CTT----SHHHHHHHHHTTTCEEEE---------ESSSCSSHHHHHH
T ss_pred ccCCHHHHHhcccccCCCCcEEEECC-------CcH----HHHHHHHHHHhCCCeEEE---------ECCCcCCHHHHHH
Confidence 45689999987 89999973 222 224577788899999998 777 567788888
Q ss_pred HHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 206 VANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 206 Vanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
+..+...- ..+...+..-.. +| .++.+.+++.+
T Consensus 153 l~~~a~~~-g~~~~v~~~~R~-~p--~~~~~k~~i~~ 185 (417)
T 3v5n_A 153 LKKAADES-DALFVLTHNYTG-YP--MVRQAREMIEN 185 (417)
T ss_dssp HHHHHHHC-SSCEEEECGGGG-SH--HHHHHHHHHHT
T ss_pred HHHHHHHc-CCEEEEEecccC-CH--HHHHHHHHHhc
Confidence 87776553 333333333222 34 66777777753
No 236
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=29.68 E-value=86 Score=25.86 Aligned_cols=55 Identities=15% Similarity=0.194 Sum_probs=43.8
Q ss_pred hHHHhcHHHHHH--hcCeeEEcCC--CCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 132 HQGVKNLDEIIA--EADGIMVARG--DLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 132 ~~~v~n~deIl~--~sDgimvaRg--DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
.+.+.+++..+. -.|.|+|.=| |+.-..+.+.+...-+.+++.+++.|.++++.+
T Consensus 52 ~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 52 GGALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 456777877766 3788888755 776778889999999999999999998888753
No 237
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=29.63 E-value=1.9e+02 Score=27.33 Aligned_cols=134 Identities=14% Similarity=0.200 Sum_probs=78.9
Q ss_pred ceeEEEeCCCCC-----CHHHHHHHHHhcccc------cc-cCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhc
Q psy259 52 TGIICTIGPASV-----AVDMLEKIIETESNS------DE-CSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQ 119 (398)
Q Consensus 52 t~Iictigp~~~-----~~e~l~~~i~~Gmnv------r~-~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~ 119 (398)
.-||+ ||-+. ..+..+++.++|.+. |. |.+.|+ +.+|..++-+ + -+..+.++++ ..+.
T Consensus 16 ~~vIA--Gpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~pr---ts~~~~~g~~--l-~~gl~~l~~~--~~~~ 85 (280)
T 2qkf_A 16 FVLFG--GINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANR---SSIHSYRGVG--L-EEGLKIFEKV--KAEF 85 (280)
T ss_dssp CEEEE--EEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSC---SSSSSCCCSC--H-HHHHHHHHHH--HHHH
T ss_pred eEEEE--ecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCC---CChHHhhccc--h-HHHHHHHHHH--HHHc
Confidence 44666 88766 455567777777554 11 333221 1222222211 1 2245566666 4443
Q ss_pred CCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC
Q psy259 120 GKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT 199 (398)
Q Consensus 120 ~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt 199 (398)
.+.+++-+=+++.++-+.+. +|.+=|+-+++ ...+ +++.+-+.||||++.|-|- -|
T Consensus 86 --Gl~~~te~~d~~~~~~l~~~---~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~G~~--------~t 141 (280)
T 2qkf_A 86 --GIPVITDVHEPHQCQPVAEV---CDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKKPQF--------LS 141 (280)
T ss_dssp --CCCEEEECCSGGGHHHHHHH---CSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEECCTT--------SC
T ss_pred --CCcEEEecCCHHHHHHHHhh---CCEEEECcccc------cCHH-----HHHHHHcCCCcEEEECCCC--------CC
Confidence 58899988888887777664 79999996654 2222 5555567899999854432 25
Q ss_pred chhhhhHHHHHH-hCCcEEEe
Q psy259 200 RAEISDVANAVL-DGADCVML 219 (398)
Q Consensus 200 raEvsDVanav~-dG~D~vmL 219 (398)
-.|+-+.+..+. .|.+-++|
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEE
Confidence 567777777665 47643343
No 238
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=29.51 E-value=1e+02 Score=27.84 Aligned_cols=105 Identities=12% Similarity=0.163 Sum_probs=56.7
Q ss_pred hcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCC---CCCChhhHHHHHHHHHHHHHHc--CCCEEEeehhhHHh
Q psy259 118 EQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLG---IEIPPWKVFLAQKQMIAKCNKV--GKPVICATQMLESM 192 (398)
Q Consensus 118 ~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg---~e~~~~~v~~~qk~ii~~c~~~--gkpvi~ATQmLeSM 192 (398)
+.|..+.+...-.|+ ++.++++++.+|.|.+..-.-| -.++ +......+++-+.+.+. +.|+.+.
T Consensus 110 ~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~-~~~~~~i~~lr~~~~~~~~~~~I~v~------- 179 (230)
T 1tqj_A 110 ELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI-PEVLPKIRALRQMCDERGLDPWIEVD------- 179 (230)
T ss_dssp HTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC-GGGHHHHHHHHHHHHHHTCCCEEEEE-------
T ss_pred HcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc-HHHHHHHHHHHHHHHhcCCCCcEEEE-------
Confidence 345555554444554 5667788888998866533222 1222 22222333444444333 5677652
Q ss_pred hcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHH
Q psy259 193 IKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHN 238 (398)
Q Consensus 193 i~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~ 238 (398)
-.-.+.. +.....-|+|++...+---...-|.++++.+.+
T Consensus 180 -GGI~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 180 -GGLKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp -SSCCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred -CCcCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 2223332 244555599999986443344468888887754
No 239
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=29.47 E-value=47 Score=26.24 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCcEEEEECCC--------chHHHHHHhhCCCCCEEEE
Q psy259 272 IAAVEAASKVFAGAIVVLTTT--------GTSARLISKYRPRCPIISV 311 (398)
Q Consensus 272 ~aav~~A~~~~A~aIIv~T~S--------G~tA~~iSkyRP~~PIIAV 311 (398)
...++.|. +++.||+-+.. |.++..+.+.-| ||++.|
T Consensus 93 ~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 93 EMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred HHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 33445555 89999888753 677777777765 999876
No 240
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=29.22 E-value=1.1e+02 Score=28.67 Aligned_cols=84 Identities=17% Similarity=0.317 Sum_probs=53.7
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+ .|... ...++.+|-++||+|+| ++| ..+.+|+..+..+..
T Consensus 55 ~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~~GkhVl~---------EKP~a~~~~e~~~l~~~a~ 114 (334)
T 3ohs_X 55 YGSYEELAKDPNVEVAYVG-------TQHPQ----HKAAVMLCLAAGKAVLC---------EKPMGVNAAEVREMVTEAR 114 (334)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------CCGGG----HHHHHHHHHHTTCEEEE---------ESSSSSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEC-------CCcHH----HHHHHHHHHhcCCEEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 468899998 48999998 24332 23456678899999998 777 457778877777765
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.. ..+...+-.- --+| +++.+.+++.+
T Consensus 115 ~~-~~~~~v~~~~-r~~p--~~~~~k~~i~~ 141 (334)
T 3ohs_X 115 SR-GLFLMEAIWT-RFFP--ASEALRSVLAQ 141 (334)
T ss_dssp HT-TCCEEEECGG-GGSH--HHHHHHHHHHH
T ss_pred Hh-CCEEEEEEhH-hcCH--HHHHHHHHHhc
Confidence 53 2233322211 1123 56677776654
No 241
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=28.98 E-value=3.2e+02 Score=25.30 Aligned_cols=19 Identities=5% Similarity=-0.031 Sum_probs=13.3
Q ss_pred HHHHHHHhcCCcEEEEECC
Q psy259 273 AAVEAASKVFAGAIVVLTT 291 (398)
Q Consensus 273 aav~~A~~~~A~aIIv~T~ 291 (398)
..++.+.+.++++|++..+
T Consensus 176 ~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 176 IMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp HHHHHHTTSCCCEEEECCC
T ss_pred HHHHHHHHcCCcEEEecCC
Confidence 3456667789999887543
No 242
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=28.94 E-value=95 Score=30.11 Aligned_cols=93 Identities=23% Similarity=0.215 Sum_probs=49.7
Q ss_pred hHHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCCh-HHHHHHHHHHHHHhcC
Q psy259 205 DVANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDS-AHSVAIAAVEAASKVF 282 (398)
Q Consensus 205 DVanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aav~~A~~~~ 282 (398)
-.-..+.+|||.+=+.||+. -| -|+..-+.|.|+.--.|.-.. .+. ..+...|+ .-.++.+|+++ +
T Consensus 70 ~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~---~~~----~vpISIDT~~~~VaeaAl~a----G 137 (318)
T 2vp8_A 70 AVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRG---AYP----DQLISVDTWRAQVAKAACAA----G 137 (318)
T ss_dssp HHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHH---HST----TCEEEEECSCHHHHHHHHHH----T
T ss_pred HHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHh---hCC----CCeEEEeCCCHHHHHHHHHh----C
Confidence 34557889999999999965 57 777777888887665554210 000 11222222 23444444443 7
Q ss_pred CcEEEEECCCc----hHHHHHHhhCCCCCEEEEeC
Q psy259 283 AGAIVVLTTTG----TSARLISKYRPRCPIISVTR 313 (398)
Q Consensus 283 A~aIIv~T~SG----~tA~~iSkyRP~~PIIAVT~ 313 (398)
|+ ++-.-|| ..+..+++| .||++....
T Consensus 138 a~--iINDVsg~~d~~m~~vaa~~--g~~vVlmh~ 168 (318)
T 2vp8_A 138 AD--LINDTWGGVDPAMPEVAAEF--GAGLVCAHT 168 (318)
T ss_dssp CC--EEEETTSSSSTTHHHHHHHH--TCEEEEECC
T ss_pred CC--EEEECCCCCchHHHHHHHHh--CCCEEEECC
Confidence 77 3344443 567788888 589888764
No 243
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=28.71 E-value=1.5e+02 Score=26.20 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=41.8
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEeecChHHH-hcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcC
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKIENHQGV-KNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVG 179 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v-~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~g 179 (398)
.|-.=+..+.+. +.+.|.++.+..-=++.+.- +.++.++.- .|||++...+. ...++.+.+.|
T Consensus 21 ~~~~~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-------------~~~~~~l~~~~ 85 (276)
T 3jy6_A 21 FSTELFKGISSI--LESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN-------------PQTVQEILHQQ 85 (276)
T ss_dssp HHHHHHHHHHHH--HHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC-------------HHHHHHHHTTS
T ss_pred HHHHHHHHHHHH--HHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc-------------HHHHHHHHHCC
Confidence 333334556666 77777776665433333322 334444443 89999986553 23566778899
Q ss_pred CCEEEe
Q psy259 180 KPVICA 185 (398)
Q Consensus 180 kpvi~A 185 (398)
.||++.
T Consensus 86 iPvV~i 91 (276)
T 3jy6_A 86 MPVVSV 91 (276)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 999974
No 244
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=28.58 E-value=1.8e+02 Score=27.22 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=43.4
Q ss_pred hcCCcccEEEee---cChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 118 EQGKHIKIIAKI---ENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 118 ~~~~~~~iiaKI---E~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+.++.||+-+ -+.++++....--+. +||+|+.+-...- .+.+.+...-+.|.+.+ +.|+++-
T Consensus 67 ~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 67 LVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp HHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred HhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 345678999977 356666655555555 8999998665432 34577777777776655 8999973
No 245
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.55 E-value=3.4e+02 Score=25.37 Aligned_cols=98 Identities=8% Similarity=0.100 Sum_probs=55.1
Q ss_pred hHHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHc---CCCEEEeehhhHHhhcCCCCCchhhh
Q psy259 132 HQGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKV---GKPVICATQMLESMIKKPRATRAEIS 204 (398)
Q Consensus 132 ~~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~---gkpvi~ATQmLeSMi~~~~PtraEvs 204 (398)
.++++++ +-.++. +|||++. |=-| ..+..++ .+++++.+.+. ..|||+-| ...+-.|+-
T Consensus 23 ~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~E----r~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ai 88 (294)
T 3b4u_A 23 IDAMIAHARRCLSNGCDSVTLF-GTTGEGCSVGSRE----RQAILSSFIAAGIAPSRIVTGV---------LVDSIEDAA 88 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHH----HHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHH----HHHHHHHHHHHhCCCCcEEEeC---------CCccHHHHH
Confidence 3445433 444555 8999986 3211 1222333 23444444432 35888632 334445555
Q ss_pred hHHH-HHHhCCcEEEecCccCCC-CChHHHHHHHHHHHHHH
Q psy259 205 DVAN-AVLDGADCVMLSGETAKG-DYPVECVRAMHNTCKEA 243 (398)
Q Consensus 205 DVan-av~dG~D~vmLS~ETA~G-~yP~eaV~~m~~I~~~a 243 (398)
+.+. |-..|+|++|+..=--.. --+-+.++....|+..+
T Consensus 89 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 89 DQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 5554 445699999997543333 23567788888888777
No 246
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=28.50 E-value=3.7e+02 Score=25.19 Aligned_cols=101 Identities=17% Similarity=0.058 Sum_probs=55.4
Q ss_pred HHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHH
Q psy259 133 QGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVAN 208 (398)
Q Consensus 133 ~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVan 208 (398)
++++++ +-.++. +|||++. |=-| ..+..++-..+-+..++.++ -..|||+- -...+-.|+-+.+.
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~ 100 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAH---------VGCVSTAESQQLAA 100 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHH
Confidence 444333 444555 8999986 4221 12223333333333333332 24688863 23444455555444
Q ss_pred -HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 209 -AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 209 -av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
|-..|+|++|+..=--..-=+-+.++....|+..+.
T Consensus 101 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 101 SAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 445699999997543333335667788888887776
No 247
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=28.27 E-value=2.3e+02 Score=26.12 Aligned_cols=137 Identities=15% Similarity=0.185 Sum_probs=84.1
Q ss_pred HHHcCCCEEEeehhhHHhhcCCCC-----Cchhh----hhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 175 CNKVGKPVICATQMLESMIKKPRA-----TRAEI----SDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 175 c~~~gkpvi~ATQmLeSMi~~~~P-----traEv----sDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
|+....||.+ ||. ||. +..|+ .|+..+..-|+|+|.+..=|..|.--.++.+.+-..+...+-
T Consensus 50 ~~~~~ipV~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~v 121 (224)
T 2bdq_A 50 LHEKGISVAV-------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPL 121 (224)
T ss_dssp HHHTTCEEEE-------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCE
T ss_pred hhhcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeE
Confidence 7888999998 765 443 34455 799999999999999999999999988887777665554332
Q ss_pred hhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCchH-----------HHHHHhhCCCCCEEEEeC-
Q psy259 246 AIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTTGTS-----------ARLISKYRPRCPIISVTR- 313 (398)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~SG~t-----------A~~iSkyRP~~PIIAVT~- 313 (398)
. +|+. |+. .+ ..++.+ |.+...+++.+-|+ |..|.. .+++.++.++.-|++-.-
T Consensus 122 T-FHRA-FD~----~~-~~d~~~-----ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV 187 (224)
T 2bdq_A 122 V-FHMA-FDV----IP-KSDQKK-----SIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGV 187 (224)
T ss_dssp E-ECGG-GGG----SC-TTTHHH-----HHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSC
T ss_pred E-EECc-hhc----cC-CcCHHH-----HHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCC
Confidence 2 2332 332 21 123333 45666778899876 433222 245666666666665321
Q ss_pred ChhhhhhccccccceEEecC
Q psy259 314 FPQVARQLHLHRSIIPLVYE 333 (398)
Q Consensus 314 n~~taRqL~L~wGV~Pvl~~ 333 (398)
+..-+.++.=.-||.-++..
T Consensus 188 ~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 188 TAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp CTTTHHHHHHHHTCCEEEET
T ss_pred CHHHHHHHHHhhCCCEEccc
Confidence 22222333223466666653
No 248
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=28.23 E-value=2.8e+02 Score=25.10 Aligned_cols=87 Identities=20% Similarity=0.189 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhchhcCCcccEEE--eecCh-------HHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHH
Q psy259 104 ESNVRLIEKLMATGEQGKHIKIIA--KIENH-------QGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIA 173 (398)
Q Consensus 104 vddV~~ir~~~~l~~~~~~~~iia--KIE~~-------~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~ 173 (398)
.+|++++|+. . +++|+. |..-. .-++.+++.++. +|.|.+.=..+ .-| + ..+.+++
T Consensus 58 ~~~i~~ir~~--v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~--~~p-~----~l~~~i~ 123 (232)
T 3igs_A 58 IDNLRMTRSL--V-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTAR--QRP-V----AVEALLA 123 (232)
T ss_dssp HHHHHHHHTT--C-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSS--CCS-S----CHHHHHH
T ss_pred HHHHHHHHHh--c-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECcccc--CCH-H----HHHHHHH
Confidence 4578888876 3 355664 32100 013346666666 89998763321 112 2 3456788
Q ss_pred HHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEE
Q psy259 174 KCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVM 218 (398)
Q Consensus 174 ~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vm 218 (398)
.+++.|.++++- ..|.. +.-.+...|+|.|-
T Consensus 124 ~~~~~g~~v~~~-----------v~t~e---ea~~a~~~Gad~Ig 154 (232)
T 3igs_A 124 RIHHHHLLTMAD-----------CSSVD---DGLACQRLGADIIG 154 (232)
T ss_dssp HHHHTTCEEEEE-----------CCSHH---HHHHHHHTTCSEEE
T ss_pred HHHHCCCEEEEe-----------CCCHH---HHHHHHhCCCCEEE
Confidence 889999999873 22333 34577888999995
No 249
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=28.22 E-value=1.7e+02 Score=27.88 Aligned_cols=127 Identities=24% Similarity=0.321 Sum_probs=68.2
Q ss_pred HHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCCh-HHHHHHHHHHHHHhcCCc
Q psy259 207 ANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDS-AHSVAIAAVEAASKVFAG 284 (398)
Q Consensus 207 anav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aav~~A~~~~A~ 284 (398)
-..+.+|||.+=+.+|+. -|.-|+..-+.+.+++--.|.-. ... ..+...|+ .-.++.+|+++ ++.
T Consensus 70 ~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~------~~~--~vpiSIDT~~~~V~~aAl~a----Ga~ 137 (297)
T 1tx2_A 70 KEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVS------KEV--KLPISIDTYKAEVAKQAIEA----GAH 137 (297)
T ss_dssp HHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHH------HHS--CSCEEEECSCHHHHHHHHHH----TCC
T ss_pred HHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHH------hcC--CceEEEeCCCHHHHHHHHHc----CCC
Confidence 455789999999999875 56556666666776665444321 000 12222222 23444455444 776
Q ss_pred EEEEECCCchH-----HHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHHHHHHHHHHHHcC
Q psy259 285 AIVVLTTTGTS-----ARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIKYGRDRK 359 (398)
Q Consensus 285 aIIv~T~SG~t-----A~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~~ake~G 359 (398)
.| -.-||.. +..+++|. +|++..... |. |- |.+ -.+++.+.+...++.+.+.|
T Consensus 138 iI--Ndvsg~~~d~~m~~~aa~~g--~~vVlmh~~-----------G~-p~-y~d-----~v~ev~~~l~~~i~~a~~~G 195 (297)
T 1tx2_A 138 II--NDIWGAKAEPKIAEVAAHYD--VPIILMHNR-----------DN-MN-YRN-----LMADMIADLYDSIKIAKDAG 195 (297)
T ss_dssp EE--EETTTTSSCTHHHHHHHHHT--CCEEEECCC-----------SC-CC-CSS-----HHHHHHHHHHHHHHHHHHTT
T ss_pred EE--EECCCCCCCHHHHHHHHHhC--CcEEEEeCC-----------CC-CC-cch-----HHHHHHHHHHHHHHHHHHcC
Confidence 43 4555543 67788885 898887641 21 11 111 11334455566677777777
Q ss_pred CCCCCCeEEE
Q psy259 360 FLNQGDPVIV 369 (398)
Q Consensus 360 lik~GD~VVV 369 (398)
+ ++ +.+++
T Consensus 196 I-~~-~~Iil 203 (297)
T 1tx2_A 196 V-RD-ENIIL 203 (297)
T ss_dssp C-CG-GGEEE
T ss_pred C-Ch-hcEEE
Confidence 6 22 44544
No 250
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=28.18 E-value=95 Score=29.22 Aligned_cols=84 Identities=20% Similarity=0.286 Sum_probs=54.5
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav~ 211 (398)
..+++|+|+- .|+|+|+ .|.. ....++.+|-++||+|+| ++|. .|.+|+..+..+..
T Consensus 83 y~d~~ell~~~~iDaV~Ia-------tP~~----~H~~~a~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 142 (393)
T 4fb5_A 83 TADWRALIADPEVDVVSVT-------TPNQ----FHAEMAIAALEAGKHVWC---------EKPMAPAYADAERMLATAE 142 (393)
T ss_dssp ESCHHHHHHCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCcEEEEC-------CChH----HHHHHHHHHHhcCCeEEE---------ccCCcccHHHHHHhhhhHH
Confidence 4689999975 7999998 2332 334567788899999998 7774 67778777777765
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.- ..+..-|..-. -+| .++.+.+++.+
T Consensus 143 ~~-g~~l~vg~~~R-~~p--~~~~~k~~i~~ 169 (393)
T 4fb5_A 143 RS-GKVAALGYNYI-QNP--VMRHIRKLVGD 169 (393)
T ss_dssp HS-SSCEEECCGGG-GCH--HHHHHHHHHHT
T ss_pred hc-CCccccccccc-cCh--HHHHHHHHHHc
Confidence 43 33333333221 123 56667766654
No 251
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=28.12 E-value=2.2e+02 Score=25.82 Aligned_cols=88 Identities=8% Similarity=-0.013 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcCCcEEEEECCC---------chHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcc
Q psy259 271 AIAAVEAASKVFAGAIVVLTTT---------GTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWL 341 (398)
Q Consensus 271 a~aav~~A~~~~A~aIIv~T~S---------G~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~ 341 (398)
+.+.++.+.+.+++.||+-++. |.++..+.+.-| ||++.+-+.... ....+++.-. ..
T Consensus 100 ~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~~--------~~~~Ilva~D----~s 166 (319)
T 3olq_A 100 YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMVKDKEWP--------EYGTIVVAAN----LS 166 (319)
T ss_dssp HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEEESSCCC--------TTCEEEEECC----CS
T ss_pred HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEecCcccc--------cCCeEEEEEC----CC
Confidence 3444566677789999987653 778888877664 999999865421 1233443321 11
Q ss_pred c-------CHHHHHHHHHHHHHHcCCCCCCCeEEEEeccC
Q psy259 342 R-------DVDTRVAHGIKYGRDRKFLNQGDPVIVVTGWK 374 (398)
Q Consensus 342 ~-------d~d~~I~~ai~~ake~Glik~GD~VVVvsG~~ 374 (398)
. .....+.++...++.. .+|..+.+++-+.
T Consensus 167 ~~~~~~~~~s~~al~~a~~la~~~---~~~a~l~ll~v~~ 203 (319)
T 3olq_A 167 NEESYHDALNLKLIELTNDLSHRI---QKDPDVHLLSAYP 203 (319)
T ss_dssp CCSTHHHHHHHHHHHHHHHHHHHH---CSSCCEEEEEEEC
T ss_pred CcchhHHHHHHHHHHHHHHHHHhc---cCCCeEEEEEeec
Confidence 2 1356788888888764 1245566665554
No 252
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=28.09 E-value=2.8e+02 Score=23.68 Aligned_cols=52 Identities=10% Similarity=0.171 Sum_probs=33.8
Q ss_pred HcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 177 KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 177 ~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
...+|++.+- --+ ..|+..+...|+|+|.+++---..+-|.+.++.+.+.++
T Consensus 160 ~~~~pvia~G----------GI~---~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 160 SVKIPVVAIG----------GIN---KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HCSSCEEEES----------SCC---TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred hCCCCEEEEC----------CcC---HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 3478998752 222 136677778899999997644444557677766655544
No 253
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=28.07 E-value=35 Score=29.09 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=26.2
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|-| .+|+|++|.++.
T Consensus 110 ~~Dvvi~iS~sG~t~~~~~~~~~ak~~-g~~vi~iT~~~~ 148 (188)
T 1tk9_A 110 EKDVLIGISTSGKSPNVLEALKKAKEL-NMLCLGLSGKGG 148 (188)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEEEGGG
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 457899999999987543 4444 699999999753
No 254
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=27.95 E-value=1.3e+02 Score=27.85 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=42.4
Q ss_pred HHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHH----------------HHHHHHHHc--CCCEEEeehhhHHhhc
Q psy259 134 GVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQK----------------QMIAKCNKV--GKPVICATQMLESMIK 194 (398)
Q Consensus 134 ~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk----------------~ii~~c~~~--gkpvi~ATQmLeSMi~ 194 (398)
.++-+.++.+. +|+|.++ .-+ .=|..+=|.+|+ .+++..++. ..|+++-| -.
T Consensus 33 ~~~~~~~l~~~G~D~IElG-~P~--sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~------y~ 103 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIG-FPF--SDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMT------YY 103 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEE-CCC--SCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEC------CH
T ss_pred HHHHHHHHHHcCCCEEEEC-CCC--CCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEe------cC
Confidence 44555666666 8999995 111 113323344443 346666655 89999821 11
Q ss_pred CCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 195 KPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 195 ~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
||.=....-..+..+..-|+|++.+.
T Consensus 104 n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 104 NPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 22111111234455667799999996
No 255
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=27.79 E-value=2e+02 Score=21.73 Aligned_cols=61 Identities=20% Similarity=0.160 Sum_probs=37.3
Q ss_pred HHHHHHhcCCcEEEEECC----CchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVLTT----TGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T~----SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.|++--. +|.. .+.+. -++.+|||.+|...... ..-.+--|+.-++.++.
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr-~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~ 104 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREVR-KKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPF 104 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHHH-TTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHH-hcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCC
Confidence 344445567787776432 3433 23343 35679999999765443 33456779998888753
No 256
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=27.77 E-value=1.5e+02 Score=27.76 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=30.1
Q ss_pred hhhcccc-ccceE--EecCCCCCCCcccCHHHHHHHHHHHHHHcCCCCCCCeEEEEec
Q psy259 318 ARQLHLH-RSIIP--LVYEEPSPADWLRDVDTRVAHGIKYGRDRKFLNQGDPVIVVTG 372 (398)
Q Consensus 318 aRqL~L~-wGV~P--vl~~~~~~~~w~~d~d~~I~~ai~~ake~Glik~GD~VVVvsG 372 (398)
.++...- +||-+ ++.+.. +.+..+-..++.+.++++|+ +++.+++|+.
T Consensus 102 m~~~l~~~~GVp~~~IllE~~-----S~nT~ENa~~s~~ll~~~g~--~~~~iiLVTs 152 (266)
T 3ca8_A 102 LADIAHQFWHIPHEKIWIEDQ-----STNCGENARFSIALLNQAVE--RVHTAIVVQD 152 (266)
T ss_dssp HHHHHHHTTCCCGGGEEEECC-----CCSHHHHHHHHHHHHHTCSS--CCSCEEEECC
T ss_pred HHHHHHHhcCCCHHHEEeCCC-----CccHHHHHHHHHHHHHhcCC--CCCeEEEECC
Confidence 3444444 48843 455544 35666777888889998887 4455666654
No 257
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=27.64 E-value=3.3e+02 Score=25.53 Aligned_cols=62 Identities=24% Similarity=0.279 Sum_probs=41.0
Q ss_pred hcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCC
Q psy259 136 KNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGA 214 (398)
Q Consensus 136 ~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~ 214 (398)
+.++.+++. +|+|.+.-|+ | ..+++.+++.|.|++.-. .| ..+...+...|+
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t---~~~a~~~~~~Ga 139 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TA---VRHALKAERLGV 139 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SS---HHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCEEEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CC---HHHHHHHHHcCC
Confidence 445555555 8999987442 3 245677788899998521 12 234567888999
Q ss_pred cEEEecCccC
Q psy259 215 DCVMLSGETA 224 (398)
Q Consensus 215 D~vmLS~ETA 224 (398)
|++.++|=++
T Consensus 140 D~i~v~g~~~ 149 (328)
T 2gjl_A 140 DAVSIDGFEC 149 (328)
T ss_dssp SEEEEECTTC
T ss_pred CEEEEECCCC
Confidence 9999976443
No 258
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.64 E-value=4e+02 Score=25.22 Aligned_cols=96 Identities=15% Similarity=0.175 Sum_probs=52.5
Q ss_pred HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH-HHHHhCC
Q psy259 139 DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA-NAVLDGA 214 (398)
Q Consensus 139 deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa-nav~dG~ 214 (398)
+-.++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||+- -...+-.|+-+.+ .|-..|+
T Consensus 51 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~eai~la~~A~~~Ga 119 (314)
T 3qze_A 51 DFHLQEGTNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAG---------TGANSTREAVALTEAAKSGGA 119 (314)
T ss_dssp HHHHHHTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCC
Confidence 334444 8999986 3221 12223333333333344332 23688873 3344445554444 4556799
Q ss_pred cEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 215 DCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 215 D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
|++|+..=--..--+-+.++....|+..+.-
T Consensus 120 davlv~~P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 120 DACLLVTPYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 9999975433333356677888888776643
No 259
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=27.40 E-value=16 Score=30.17 Aligned_cols=53 Identities=26% Similarity=0.451 Sum_probs=35.8
Q ss_pred chhcCCcccEEEeecChHHH--hcH--HHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 116 TGEQGKHIKIIAKIENHQGV--KNL--DEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v--~n~--deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
|....++..+=.|+|++.++ +|- ++-++.+|+|+++ +|-.++ .+ |-.|||++-
T Consensus 25 L~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA-~d~~v~--~~-------------RF~GK~v~~ 81 (106)
T 2r48_A 25 LQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIA-ADRSVN--KD-------------RFIGKKLLS 81 (106)
T ss_dssp HHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEE-ESSCCC--CG-------------GGTTSBEEE
T ss_pred HHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEE-eCCccC--Hh-------------HcCCCeEEE
Confidence 44444455566788887654 442 4456899999999 887766 23 357888885
No 260
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=27.31 E-value=2.5e+02 Score=26.86 Aligned_cols=156 Identities=13% Similarity=0.103 Sum_probs=87.4
Q ss_pred CHHHHHHHHHhcccccccCCCC-CCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEee-cChHHHhcHHHH
Q psy259 64 AVDMLEKIIETESNSDECSEKP-RECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKI-ENHQGVKNLDEI 141 (398)
Q Consensus 64 ~~e~l~~~i~~Gmnvr~~~~~~-~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKI-E~~~~v~n~deI 141 (398)
..+.++.|.++|...-+..|+- .||.+..+-. ..+ |+...+|++ .. ...++++.+.. =+..-.+.++.-
T Consensus 32 k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~-~~~-----~~~e~l~~i--~~-~~~~~~i~~l~~p~~~~~~~i~~a 102 (345)
T 1nvm_A 32 VRAIARALDKAKVDSIEVAHGDGLQGSSFNYGF-GRH-----TDLEYIEAV--AG-EISHAQIATLLLPGIGSVHDLKNA 102 (345)
T ss_dssp HHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBC-CSS-----CHHHHHHHH--HT-TCSSSEEEEEECBTTBCHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCCcccC-CCC-----CHHHHHHHH--Hh-hCCCCEEEEEecCCcccHHHHHHH
Confidence 4566888999998887765432 3331111100 000 123445555 32 23456666652 111112345555
Q ss_pred HHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHH-hCCcEEEe
Q psy259 142 IAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVL-DGADCVML 219 (398)
Q Consensus 142 l~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~-dG~D~vmL 219 (398)
.+. +|++.|. + +..++ ..-+..++.|+++|+.++..- ...++-+...+-+++.++. -|+|+|-|
T Consensus 103 ~~aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 103 YQAGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHHTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 555 8998885 2 22111 124567889999999988752 1223444455667766544 57999999
Q ss_pred cCccCCCCChHHHHHHHHHHHHHH
Q psy259 220 SGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 220 S~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
.+=|-.. .|-+.-+.+..+.+..
T Consensus 169 ~DT~G~~-~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 169 ADSGGAM-SMNDIRDRMRAFKAVL 191 (345)
T ss_dssp ECTTCCC-CHHHHHHHHHHHHHHS
T ss_pred CCCcCcc-CHHHHHHHHHHHHHhc
Confidence 7544444 5988777777776544
No 261
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=27.30 E-value=2.7e+02 Score=26.44 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=32.9
Q ss_pred HHHHHHHhc----CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 273 AAVEAASKV----FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 273 aav~~A~~~----~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
.+.++..++ ..++||+.+=+|.|+.-+++ ..|.+.||+|-+..
T Consensus 186 ~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~ 236 (342)
T 4d9b_A 186 SALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSR 236 (342)
T ss_dssp HHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecC
Confidence 455666664 47899999999988766654 57999999998754
No 262
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=27.19 E-value=2.1e+02 Score=21.75 Aligned_cols=62 Identities=19% Similarity=0.186 Sum_probs=37.4
Q ss_pred HHHHHHhcCCcEEEEEC----CCchHH-HHHHhh--CCCCCEEEEeCChhh-hhhccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVLT----TTGTSA-RLISKY--RPRCPIISVTRFPQV-ARQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T----~SG~tA-~~iSky--RP~~PIIAVT~n~~t-aRqL~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.|++-- .+|... +.+.+. .|.+|||++|..... ...-.+-.|+.-++.++.
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~ 107 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPF 107 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCC
Confidence 33444556778766632 245432 334322 378999999986543 334456788988888753
No 263
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=27.14 E-value=3e+02 Score=24.81 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=30.2
Q ss_pred chhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHH
Q psy259 200 RAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTC 240 (398)
Q Consensus 200 raEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~ 240 (398)
|++-.|...|+..|+|.+....--..-..|.++.+.+.+-+
T Consensus 167 ~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i 207 (222)
T 4dbe_A 167 GSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKII 207 (222)
T ss_dssp STTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred ccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHH
Confidence 44445778899999999998666666678988876665444
No 264
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=27.11 E-value=1e+02 Score=29.05 Aligned_cols=45 Identities=24% Similarity=0.369 Sum_probs=33.6
Q ss_pred HhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 135 VKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 135 v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+-.+|+.+.+|++.|.-|-| ..+. .......++.+++.|||++.
T Consensus 47 ~~E~~e~~~~a~al~iNiGtl----~~~~-~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 47 EEELEEMIRLADAVVINIGTL----DSGW-RRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC----CHHH-HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCeEEEECCCC----ChHH-HHHHHHHHHHHHHcCCCEEE
Confidence 356788999999999998865 2333 33444567889999999997
No 265
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=27.06 E-value=3.4e+02 Score=24.21 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=36.8
Q ss_pred CCchH-HHHHHhhCC--CCCEEEEeCChhhh-hhccccccceEEecCCCCCCCcccCHHHHHHHHHHHHH
Q psy259 291 TTGTS-ARLISKYRP--RCPIISVTRFPQVA-RQLHLHRSIIPLVYEEPSPADWLRDVDTRVAHGIKYGR 356 (398)
Q Consensus 291 ~SG~t-A~~iSkyRP--~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~~ai~~ak 356 (398)
.+|.. .+.+-+..| .+|||++|.+.... +.-.+--|+.-++.++.. .+....+++..++...
T Consensus 182 ~dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~yl~KP~~----~~~L~~~i~~~l~~~~ 247 (259)
T 3luf_A 182 IDGISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDFLNQPFE----PEELQCRVSHNLEALE 247 (259)
T ss_dssp SCHHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEEEESSCC----HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhheEcCCCC----HHHHHHHHHHHHHhHh
Confidence 36655 345555444 68999999876543 333467799998887641 1233445555555443
No 266
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=26.83 E-value=1.2e+02 Score=28.03 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=38.5
Q ss_pred HhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHHHh
Q psy259 135 VKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAVLD 212 (398)
Q Consensus 135 v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav~d 212 (398)
..+++++++..|.|+|+ .|.... ..++..|-++||+|+| ++|. .+.+|...+..+...
T Consensus 57 ~~~~~~ll~~~D~V~i~-------tp~~~h----~~~~~~al~~gk~vl~---------EKP~~~~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 57 FDSIESLAKKCDCIFLH-------SSTETH----YEIIKILLNLGVHVYV---------DKPLASTVSQGEELIELSTK 115 (308)
T ss_dssp CSCHHHHHTTCSEEEEC-------CCGGGH----HHHHHHHHHTTCEEEE---------CSSSSSSHHHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCEEEEe-------CCcHhH----HHHHHHHHHCCCcEEE---------cCCCCCCHHHHHHHHHHHHH
Confidence 35788888889999997 333332 3455677889999997 5554 455555555555443
No 267
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=26.75 E-value=1.7e+02 Score=26.78 Aligned_cols=89 Identities=7% Similarity=-0.043 Sum_probs=52.6
Q ss_pred HHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeeh
Q psy259 109 LIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQ 187 (398)
Q Consensus 109 ~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQ 187 (398)
.+|+. |......+.....+.+++-++ ..... +|.|++..-|- |.++ ..+... +..+...|+|+++=+.
T Consensus 9 ~~k~~--l~~g~~~~~~~l~v~~p~~~e---~a~~~gaD~v~lDlEd~----p~~~-~~a~~~-~~~~~~~~~~~~VRv~ 77 (256)
T 1dxe_A 9 KFKAA--LAAKQVQIGCWSALSNPISTE---VLGLAGFDWLVLDGEHA----PNDI-STFIPQ-LMALKGSASAPVVRVP 77 (256)
T ss_dssp HHHHH--HHTTCCEEEEEECSCSHHHHH---HHTTSCCSEEEEESSSS----SCCH-HHHHHH-HHHTTTCSSEEEEECS
T ss_pred HHHHH--HHCCCCeEEEEEeCCCHHHHH---HHHhCCCCEEEEcCCCC----CCCH-HHHHHH-HHHHHhCCCcEEEECC
Confidence 35666 543222467778886665443 22222 79999998885 4333 223322 2334457888988433
Q ss_pred hhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 188 MLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 188 mLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
.+. -.++..++..|+|+||+.
T Consensus 78 ---------~~~---~~~i~~~l~~g~~gI~~P 98 (256)
T 1dxe_A 78 ---------TNE---PVIIKRLLDIGFYNFLIP 98 (256)
T ss_dssp ---------SSC---HHHHHHHHHTTCCEEEES
T ss_pred ---------CCC---HHHHHHHHhcCCceeeec
Confidence 122 234777788899999995
No 268
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=26.68 E-value=2.1e+02 Score=27.20 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=40.2
Q ss_pred hhcCCcccEEEeec--ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 117 GEQGKHIKIIAKIE--NHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 117 ~~~~~~~~iiaKIE--~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
+..+.++.||+-+- +.++++.....-+. +||+|+-.-.. ...+.+.+...-+.|.+.+ +.|+++-
T Consensus 76 ~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y-~~~s~~~l~~~f~~va~a~---~lPiilY 143 (316)
T 3e96_A 76 EYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH-PYVTAGGVYAYFRDIIEAL---DFPSLVY 143 (316)
T ss_dssp HHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC-SCCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred HHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 33456788998873 33333333333333 89999975443 2335677777777776655 6899874
No 269
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=26.61 E-value=1e+02 Score=28.68 Aligned_cols=144 Identities=10% Similarity=0.056 Sum_probs=0.0
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC------------------CCchhhhhHHHHHHhCCc
Q psy259 154 DLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR------------------ATRAEISDVANAVLDGAD 215 (398)
Q Consensus 154 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~------------------PtraEvsDVanav~dG~D 215 (398)
|+++ +.++.-..-.+++++++++.|--.+|-..-.=....... |+.+-+..+..|+.+|||
T Consensus 32 DhTl-L~p~~t~~~i~~lc~eA~~~~~~aVcV~p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 110 (239)
T 3ngj_A 32 DHTL-LKADATEEQIRKLCSEAAEYKFASVCVNPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAE 110 (239)
T ss_dssp EEEE-CCTTCCHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred Cccc-CCCCCCHHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCC
Q ss_pred EEEecCccCC---CCChHHHHHHHHHHHHHHHhhhhhhHHHHHHhhcCCCCCChHHHHHHHHHHHHHhcCCcEEEEECCC
Q psy259 216 CVMLSGETAK---GDYPVECVRAMHNTCKEAEAAIWHTKLLTELKSMLPLPIDSAHSVAIAAVEAASKVFAGAIVVLTTT 292 (398)
Q Consensus 216 ~vmLS~ETA~---G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~A~aIIv~T~S 292 (398)
.|-.-=--.. |+|.. ..+-+..+.+.+......- --......+.--..+++++.+.+|+ +|=|.|
T Consensus 111 EIDmViNig~lk~g~~~~-v~~eI~~v~~a~~~~~lKV---------IlEt~~Lt~eei~~a~~ia~~aGAD--fVKTST 178 (239)
T 3ngj_A 111 EVDMVINIGMVKAKKYDD-VEKDVKAVVDASGKALTKV---------IIECCYLTNEEKVEVCKRCVAAGAE--YVKTST 178 (239)
T ss_dssp EEEEECCHHHHHTTCHHH-HHHHHHHHHHHHTTSEEEE---------ECCGGGSCHHHHHHHHHHHHHHTCS--EEECCC
T ss_pred EEEEEeehHHhccccHHH-HHHHHHHHHHHhcCCceEE---------EEecCCCCHHHHHHHHHHHHHHCcC--EEECCC
Q ss_pred chH---------HHHHHhhCCCCCEEE
Q psy259 293 GTS---------ARLISKYRPRCPIIS 310 (398)
Q Consensus 293 G~t---------A~~iSkyRP~~PIIA 310 (398)
|.+ ..+-.-..++++|.|
T Consensus 179 Gf~~ggAt~~dv~lmr~~vg~~v~VKa 205 (239)
T 3ngj_A 179 GFGTHGATPEDVKLMKDTVGDKALVKA 205 (239)
T ss_dssp SSSSCCCCHHHHHHHHHHHGGGSEEEE
T ss_pred CCCCCCCCHHHHHHHHHhhCCCceEEE
No 270
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=26.44 E-value=3.1e+02 Score=23.64 Aligned_cols=81 Identities=14% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHHHhhchhcCCcccE-EEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEE
Q psy259 106 NVRLIEKLMATGEQGKHIKI-IAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVI 183 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~i-iaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 183 (398)
.+..+|++ ....+.++.| ...+.+.+ .++..++. +|+|.++--| ..+++.|++.|.+++
T Consensus 45 ~~~~i~~i--~~~~~~~l~vg~g~~~~~~---~i~~a~~~Gad~V~~~~~~--------------~~~~~~~~~~g~~~~ 105 (212)
T 2v82_A 45 WEQSIPAI--VDAYGDKALIGAGTVLKPE---QVDALARMGCQLIVTPNIH--------------SEVIRRAVGYGMTVC 105 (212)
T ss_dssp HHHHHHHH--HHHHTTTSEEEEECCCSHH---HHHHHHHTTCCEEECSSCC--------------HHHHHHHHHTTCEEE
T ss_pred HHHHHHHH--HHhCCCCeEEEeccccCHH---HHHHHHHcCCCEEEeCCCC--------------HHHHHHHHHcCCCEE
Q ss_pred EeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEe
Q psy259 184 CATQMLESMIKKPRATRAEISDVANAVLDGADCVML 219 (398)
Q Consensus 184 ~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmL 219 (398)
+... ...++..+...|+|.|.+
T Consensus 106 ~g~~--------------t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 106 PGCA--------------TATEAFTALEAGAQALKI 127 (212)
T ss_dssp CEEC--------------SHHHHHHHHHTTCSEEEE
T ss_pred eecC--------------CHHHHHHHHHCCCCEEEE
No 271
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.36 E-value=4.1e+02 Score=25.00 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=54.2
Q ss_pred HHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH-
Q psy259 133 QGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA- 207 (398)
Q Consensus 133 ~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa- 207 (398)
++++.+ +-.++. +|||++. |=-| ..+..++-..+-+..++.+ -..|||+- -...+-+|+-+.+
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaG---------vg~~~t~~ai~la~ 96 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVG---------VSAPGFAAMRRLAR 96 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEE---------CCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEe---------cCCCCHHHHHHHHH
Confidence 344333 444444 8999986 4222 1222333223333333333 25788863 3444555565544
Q ss_pred HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 208 NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
.|-..|+|++|+..=-.. .-+-+.++....|+..+.
T Consensus 97 ~A~~~Gadavlv~~P~~~-~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 97 LSMDAGAAGVMIAPPPSL-RTDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHHHHTCSEEEECCCTTC-CSHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEECCCCCC-CCHHHHHHHHHHHHHhCC
Confidence 445569999999643321 224667778888887776
No 272
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=26.23 E-value=1e+02 Score=28.50 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=32.2
Q ss_pred hcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 136 KNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 136 ~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
+.+.++++.+|.+.|..|=+ + +.....-..+++.+++.|+|+++=
T Consensus 50 ~e~~~~~~~a~~lvi~~G~~----~-~~~~~~~~~~~~~a~~~~~pvVlD 94 (272)
T 1ekq_A 50 EEVADMAKIAGALVLNIGTL----S-KESVEAMIIAGKSANEHGVPVILD 94 (272)
T ss_dssp TTHHHHHHHSSEEEEECTTC----C-HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCEEEEECCCC----C-HHHHHHHHHHHHHHHhcCCeEEEe
Confidence 34467778899999975532 2 344455667888899999999983
No 273
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=26.08 E-value=3.6e+02 Score=24.25 Aligned_cols=78 Identities=21% Similarity=0.196 Sum_probs=47.0
Q ss_pred cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCC-chhhh-hHHHHHHhCCcEEEecCc
Q psy259 145 ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRAT-RAEIS-DVANAVLDGADCVMLSGE 222 (398)
Q Consensus 145 sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~Pt-raEvs-DVanav~dG~D~vmLS~E 222 (398)
+|.|-+..+ .+.+.+ +++ +...+.|++.. --..+. ..++- .+..++.-|+|+++....
T Consensus 180 ad~i~~~~~-----~~~~~l----~~i---~~~~~ipvva~--------GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GDIDSF----RDV---VKGCPAPVVVA--------GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SSHHHH----HHH---HHHCSSCEEEE--------CCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CCHHHH----HHH---HHhCCCCEEEE--------eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 788888731 222222 222 33457899874 222221 22211 167777889999999766
Q ss_pred cCCCCChHHHHHHHHHHHHH
Q psy259 223 TAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 223 TA~G~yP~eaV~~m~~I~~~ 242 (398)
--....|.++++.+.+++++
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66667898888887776653
No 274
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=25.95 E-value=96 Score=28.04 Aligned_cols=50 Identities=18% Similarity=0.326 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHH
Q psy259 168 QKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMH 237 (398)
Q Consensus 168 qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~ 237 (398)
-+.+++.|+++|++|.+-| ++ +..+....+..|+|+|+- +||-.+.+.+.
T Consensus 185 ~~~~v~~~~~~G~~v~~WT------Vn-------~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 234 (238)
T 3no3_A 185 HPDWVKDCKVLGMTSNVWT------VD-------DPKLMEEMIDMGVDFITT-------DLPEETQKILH 234 (238)
T ss_dssp STTHHHHHHHTTCEEEEEC------CC-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEC------CC-------CHHHHHHHHHcCCCEEEC-------CCHHHHHHHHH
Confidence 3578999999999999976 11 234667888889999986 78988777664
No 275
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=25.92 E-value=1.7e+02 Score=28.42 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=48.7
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecCh-------HHHhcHHHHHHh-----cCeeEEcCCCCCCC--CCh-hhHHHHHHH
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENH-------QGVKNLDEIIAE-----ADGIMVARGDLGIE--IPP-WKVFLAQKQ 170 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~-------~~v~n~deIl~~-----sDgimvaRgDLg~e--~~~-~~v~~~qk~ 170 (398)
=|+.+|+. + |.+..|..||--- ..++..-++++. .|.|-|.-|...-. +|. +. .+..
T Consensus 214 iv~aVr~a--v---g~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~---~~~~ 285 (363)
T 3l5l_A 214 TLAAVREV--W---PENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPA---FMGP 285 (363)
T ss_dssp HHHHHHTT--S---CTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTT---TTHH
T ss_pred HHHHHHHH--c---CCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcc---hhHH
Confidence 34555555 4 5567788888321 122333333322 69998876543211 111 11 1112
Q ss_pred HHHHHH-HcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhC-CcEEEec
Q psy259 171 MIAKCN-KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDG-ADCVMLS 220 (398)
Q Consensus 171 ii~~c~-~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG-~D~vmLS 220 (398)
.++..+ ..+.|||....+ -|. .|...++..| +|+|++.
T Consensus 286 ~~~~ir~~~~iPVi~~GgI---------~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 286 IAERVRREAKLPVTSAWGF---------GTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHTCCEEECSST---------TSH---HHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHcCCcEEEeCCC---------CCH---HHHHHHHHCCCccEEEec
Confidence 222222 347999974321 122 3456778888 9999985
No 276
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.92 E-value=4.3e+02 Score=25.01 Aligned_cols=102 Identities=14% Similarity=0.042 Sum_probs=0.0
Q ss_pred ChHHHhcHHHHHHh--cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 131 NHQGVKNLDEIIAE--ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 131 ~~~~v~n~deIl~~--sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
+.++++++=+-+-. +|||++. |=-| ..+..++-..+.+..++.++.. .|||+ .-...+-.|+-+.
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~gr-vpVia---------Gvg~~~t~~ai~l 111 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAHR-VPTIV---------SVSDLTTAKTVRR 111 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTTS-SCBEE---------ECCCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCC-CcEEE---------ecCCCCHHHHHHH
Q ss_pred HHHHHh-CCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 207 ANAVLD-GADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 207 anav~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
+....+ |+|++|+..=--..--+-+.++....|+..+
T Consensus 112 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 112 AQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp HHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
No 277
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=25.81 E-value=1.4e+02 Score=28.03 Aligned_cols=58 Identities=22% Similarity=0.473 Sum_probs=41.0
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+= |... -..++..|-++||+|+| ++| ..+.+|...+..+..
T Consensus 53 ~~~~~~ll~~~~~D~V~i~t-------p~~~----h~~~~~~al~~gk~v~~---------EKP~~~~~~e~~~l~~~a~ 112 (344)
T 3ezy_A 53 YKDPHELIEDPNVDAVLVCS-------STNT----HSELVIACAKAKKHVFC---------EKPLSLNLADVDRMIEETK 112 (344)
T ss_dssp ESSHHHHHHCTTCCEEEECS-------CGGG----HHHHHHHHHHTTCEEEE---------ESCSCSCHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEcC-------CCcc----hHHHHHHHHhcCCeEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 467899998 689999982 3332 23455577889999997 666 567777777766654
Q ss_pred h
Q psy259 212 D 212 (398)
Q Consensus 212 d 212 (398)
.
T Consensus 113 ~ 113 (344)
T 3ezy_A 113 K 113 (344)
T ss_dssp H
T ss_pred H
Confidence 4
No 278
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=25.81 E-value=30 Score=30.41 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=25.5
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||+|...+ +|-+ .+|||++|.++.
T Consensus 89 ~~DvvI~iS~SG~t~~~i~~~~~ak~~-g~~vI~IT~~~~ 127 (200)
T 1vim_A 89 DQDVLVGISGSGETTSVVNISKKAKDI-GSKLVAVTGKRD 127 (200)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHH-TCEEEEEESCTT
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHC-CCeEEEEECCCC
Confidence 347899999999987543 3333 699999999763
No 279
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=25.72 E-value=45 Score=28.25 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=25.6
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|-| .+|+|++|.++.
T Consensus 82 ~~d~vi~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 120 (180)
T 1jeo_A 82 KDDLLILISGSGRTESVLTVAKKAKNI-NNNIIAIVCECG 120 (180)
T ss_dssp TTCEEEEEESSSCCHHHHHHHHHHHTT-CSCEEEEESSCC
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 346889999999986543 3433 699999999765
No 280
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=25.67 E-value=91 Score=29.74 Aligned_cols=84 Identities=20% Similarity=0.208 Sum_probs=52.7
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+= |... ...++.+|-++||+|+| ++| ..+.+|+..+..+..
T Consensus 54 ~~~~~~ll~~~~vD~V~i~t-------p~~~----H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a~ 113 (358)
T 3gdo_A 54 VHELEEITNDPAIELVIVTT-------PSGL----HYEHTMACIQAGKHVVM---------EKPMTATAEEGETLKRAAD 113 (358)
T ss_dssp ESSTHHHHTCTTCCEEEECS-------CTTT----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEcC-------CcHH----HHHHHHHHHHcCCeEEE---------ecCCcCCHHHHHHHHHHHH
Confidence 357889988 589999983 3222 23466688899999998 777 577888877777665
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
..-=.+|. +..- --+| +++.+.+++.+
T Consensus 114 ~~g~~~~v-~~~~-r~~p--~~~~~k~~i~~ 140 (358)
T 3gdo_A 114 EKGVLLSV-YHNR-RWDN--DFLTIKKLISE 140 (358)
T ss_dssp HHTCCEEE-ECGG-GGSH--HHHHHHHHHHT
T ss_pred HcCCeEEE-eeec-ccCH--HHHHHHHHHhc
Confidence 42112232 2111 1123 56667766653
No 281
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.56 E-value=3.7e+02 Score=24.20 Aligned_cols=105 Identities=12% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecCh---------HHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHH
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENH---------QGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKC 175 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~---------~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c 175 (398)
|++++|+. . +++||..+=.. .-++.+++.++. +|.|.+.=..+.-.-...+ +++.+
T Consensus 60 ~i~~ir~~--v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~-------~i~~~ 125 (229)
T 3q58_A 60 NLRTVRPH--L-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDS-------LLTRI 125 (229)
T ss_dssp HHHHHGGG--C-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHH-------HHHHH
T ss_pred HHHHHHHh--c-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHH-------HHHHH
Q ss_pred HHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEE-----ecCccCCCCChHHHHHHHHH
Q psy259 176 NKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVM-----LSGETAKGDYPVECVRAMHN 238 (398)
Q Consensus 176 ~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vm-----LS~ETA~G~yP~eaV~~m~~ 238 (398)
++.|.++++ ....+.-+ -.|...|+|.|- +++.+-.+....+.++.+.+
T Consensus 126 ~~~g~~v~~---------~v~t~eea-----~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~ 179 (229)
T 3q58_A 126 RLHGLLAMA---------DCSTVNEG-----ISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSH 179 (229)
T ss_dssp HHTTCEEEE---------ECSSHHHH-----HHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHT
T ss_pred HHCCCEEEE---------ecCCHHHH-----HHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHH
No 282
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=25.53 E-value=1.1e+02 Score=27.33 Aligned_cols=70 Identities=13% Similarity=0.213 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcC
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVG 179 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~g 179 (398)
.|..=+..+.+. +.+.|.++.+..--.+.+....+.+.+. -.|||++...+. +. ..++.+.+.|
T Consensus 24 ~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----~~--------~~~~~l~~~~ 89 (288)
T 3gv0_A 24 FTSQMVFGITEV--LSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEP----ND--------PRVRFMTERN 89 (288)
T ss_dssp HHHHHHHHHHHH--HTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCT----TC--------HHHHHHHHTT
T ss_pred HHHHHHHHHHHH--HHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCC----Cc--------HHHHHHhhCC
Confidence 443345566666 7777766555432222222333444443 389999985442 11 2356677899
Q ss_pred CCEEEe
Q psy259 180 KPVICA 185 (398)
Q Consensus 180 kpvi~A 185 (398)
.|+++.
T Consensus 90 iPvV~i 95 (288)
T 3gv0_A 90 MPFVTH 95 (288)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999974
No 283
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=25.50 E-value=78 Score=30.21 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=53.3
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++. .|.|+|+= |... ...++.+|-++||+|+| ++| ..+.+|+..+..+..
T Consensus 54 ~~~~~~ll~~~~vD~V~i~t-------p~~~----H~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a~ 113 (362)
T 3fhl_A 54 VRSFKELTEDPEIDLIVVNT-------PDNT----HYEYAGMALEAGKNVVV---------EKPFTSTTKQGEELIALAK 113 (362)
T ss_dssp ESCSHHHHTCTTCCEEEECS-------CGGG----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEeC-------ChHH----HHHHHHHHHHCCCeEEE---------ecCCCCCHHHHHHHHHHHH
Confidence 4678999987 89999982 3322 23466788899999998 777 577888887777765
Q ss_pred h-CCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 D-GADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
. |. .+|. +..- .| -.+++.+.+++.+
T Consensus 114 ~~g~-~~~v-~~~~--R~-~p~~~~~k~~i~~ 140 (362)
T 3fhl_A 114 KKGL-MLSV-YQNR--RW-DADFLTVRDILAK 140 (362)
T ss_dssp HHTC-CEEE-ECGG--GG-SHHHHHHHHHHHT
T ss_pred HcCC-EEEE-Eecc--ee-CHHHHHHHHHHHc
Confidence 4 33 2232 2211 11 1356677776654
No 284
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=25.33 E-value=2.5e+02 Score=27.34 Aligned_cols=122 Identities=16% Similarity=0.134 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- .|..+...-+...-..|++.+...+ .| -++++...+++++- ..++-
T Consensus 126 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~~~~~~-g~~~v 187 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIY-----------MPKGSAQERVDAILNLGAECIVTDM-----NY-DDTVRLTMQHAQQH-GWEVV 187 (398)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECTTCCHHHHHHHHTTTCEEEECSS-----CH-HHHHHHHHHHHHHH-TCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------EeCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHHc-CCEEe
Confidence 4566789999999874 2333333455666778999876654 23 46666655554432 11110
Q ss_pred hH----HHHHHhhcCCCCCChHHHHHHHHHHHHHhcC-----CcEEEEECCCchHHHHHHhh------CCCCCEEEEeCC
Q psy259 250 TK----LLTELKSMLPLPIDSAHSVAIAAVEAASKVF-----AGAIVVLTTTGTSARLISKY------RPRCPIISVTRF 314 (398)
Q Consensus 250 ~~----~~~~~~~~~~~~~~~~~~ia~aav~~A~~~~-----A~aIIv~T~SG~tA~~iSky------RP~~PIIAVT~n 314 (398)
.+ -|++. +......-...+.++..+++ .++||+.+=+|.++.-++++ .|...||+|-+.
T Consensus 188 ~~~~~~g~~~~------~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~ 261 (398)
T 4d9i_A 188 QDTAWEGYTKI------PTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPD 261 (398)
T ss_dssp CSSCBTTBCHH------HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEET
T ss_pred cCcccCCcCCC------CchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeC
Confidence 00 00000 00011111223345555442 68999999999987766654 367889999764
Q ss_pred h
Q psy259 315 P 315 (398)
Q Consensus 315 ~ 315 (398)
.
T Consensus 262 ~ 262 (398)
T 4d9i_A 262 K 262 (398)
T ss_dssp T
T ss_pred C
Confidence 4
No 285
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=25.32 E-value=1.1e+02 Score=27.90 Aligned_cols=74 Identities=9% Similarity=0.091 Sum_probs=44.3
Q ss_pred CcccHHHHHHHHHHhhchhcCCcccEE--EeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHH
Q psy259 100 PNLYESNVRLIEKLMATGEQGKHIKII--AKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCN 176 (398)
Q Consensus 100 ~~~~vddV~~ir~~~~l~~~~~~~~ii--aKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~ 176 (398)
+-.|......+++. +.+.|-++.+. +.=....-.+.++.++.. .|||+|...|... + ..++++++
T Consensus 15 ~~~~~~~~~g~~~~--~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~------~----~~~~~~a~ 82 (316)
T 1tjy_A 15 VGFFTSGGNGAQEA--GKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDG------L----CPALKRAM 82 (316)
T ss_dssp SHHHHHHHHHHHHH--HHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSST------T----HHHHHHHH
T ss_pred ChHHHHHHHHHHHH--HHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH------H----HHHHHHHH
Confidence 34454456667776 66667554443 111112334567776655 8999998765421 1 12456778
Q ss_pred HcCCCEEEe
Q psy259 177 KVGKPVICA 185 (398)
Q Consensus 177 ~~gkpvi~A 185 (398)
+.|.||++.
T Consensus 83 ~~gipvV~~ 91 (316)
T 1tjy_A 83 QRGVKILTW 91 (316)
T ss_dssp HTTCEEEEE
T ss_pred HCcCEEEEe
Confidence 899999985
No 286
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=25.22 E-value=1.4e+02 Score=28.53 Aligned_cols=90 Identities=13% Similarity=0.255 Sum_probs=57.8
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEee
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICAT 186 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~AT 186 (398)
++.++++ ..+. .+.+++-+-+++.++-+++ .+|.+-|+-+++ ...+ +++.+-+.||||++.|
T Consensus 77 L~~L~~~--~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~------~n~~-----LLr~~a~~gkPVilK~ 138 (288)
T 3tml_A 77 LRILSEV--KRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC------RQTD-----FIHACARSGKPVNIKK 138 (288)
T ss_dssp HHHHHHH--HHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT------TCHH-----HHHHHHTSSSCEEEEC
T ss_pred HHHHHHH--HHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc------cCHH-----HHHHHHccCCcEEEeC
Confidence 4556666 4433 5889999988877776655 499999996644 2222 3445668999999854
Q ss_pred hhhHHhhcCCCCCchhhhhHHHHHHh-CC------cEEEecCc
Q psy259 187 QMLESMIKKPRATRAEISDVANAVLD-GA------DCVMLSGE 222 (398)
Q Consensus 187 QmLeSMi~~~~PtraEvsDVanav~d-G~------D~vmLS~E 222 (398)
-|- -|-.|+-..+..+.. |. +=|+|..-
T Consensus 139 G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~er 173 (288)
T 3tml_A 139 GQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACER 173 (288)
T ss_dssp CTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEEC
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeC
Confidence 331 355666666666654 54 55776533
No 287
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=24.97 E-value=61 Score=29.55 Aligned_cols=49 Identities=18% Similarity=0.327 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHH
Q psy259 168 QKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAM 236 (398)
Q Consensus 168 qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m 236 (398)
-+..++.++++|++|.+-|- + +-.+....+..|+|+|+- +||-.+.+.+
T Consensus 200 ~~~~v~~~~~~G~~v~~wTv------n-------~~~~~~~l~~~GvdgIiT-------D~P~~~~~~l 248 (252)
T 2pz0_A 200 IPELVEGCKKNGVKLFPWTV------D-------RKEDMERMIKAGVDGIIT-------DDPETLINLV 248 (252)
T ss_dssp CHHHHHHHHHTTCEECCBCC------C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEECC------C-------CHHHHHHHHHcCCCEEEc-------CCHHHHHHHH
Confidence 36788999999999998761 1 224667788889999886 7898776654
No 288
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=24.73 E-value=3.4e+02 Score=23.50 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHH
Q psy259 63 VAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEII 142 (398)
Q Consensus 63 ~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl 142 (398)
++.+.++.++++|.+.-.+... ... +.+..+.+-+.++|+. + .+..++..+-+.+-.. ...
T Consensus 76 ~~~~~i~~~~~~Gad~v~l~~~-------~~~---~p~~~~~~~i~~~~~~--~----~~~~v~~~~~t~~e~~---~~~ 136 (223)
T 1y0e_A 76 ATSKEVDELIESQCEVIALDAT-------LQQ---RPKETLDELVSYIRTH--A----PNVEIMADIATVEEAK---NAA 136 (223)
T ss_dssp CSHHHHHHHHHHTCSEEEEECS-------CSC---CSSSCHHHHHHHHHHH--C----TTSEEEEECSSHHHHH---HHH
T ss_pred CcHHHHHHHHhCCCCEEEEeee-------ccc---CcccCHHHHHHHHHHh--C----CCceEEecCCCHHHHH---HHH
Confidence 3677888899999654222111 000 0111112234666665 4 1355666665543322 222
Q ss_pred Hh-cCeeEEcCCCCCC-CC----ChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcE
Q psy259 143 AE-ADGIMVARGDLGI-EI----PPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADC 216 (398)
Q Consensus 143 ~~-sDgimvaRgDLg~-e~----~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~ 216 (398)
+. +|.|++......- .. ....+. .+-+.+...+.|++.. ...-+. .|+..+...|+|+
T Consensus 137 ~~G~d~i~~~~~g~t~~~~~~~~~~~~~~----~~~~~~~~~~ipvia~---------GGI~~~---~~~~~~~~~Gad~ 200 (223)
T 1y0e_A 137 RLGFDYIGTTLHGYTSYTQGQLLYQNDFQ----FLKDVLQSVDAKVIAE---------GNVITP---DMYKRVMDLGVHC 200 (223)
T ss_dssp HTTCSEEECTTTTSSTTSTTCCTTHHHHH----HHHHHHHHCCSEEEEE---------SSCCSH---HHHHHHHHTTCSE
T ss_pred HcCCCEEEeCCCcCcCCCCCCCCCcccHH----HHHHHHhhCCCCEEEe---------cCCCCH---HHHHHHHHcCCCE
Confidence 23 7999886432211 11 112221 2222234458999873 233333 4677778889999
Q ss_pred EEecCccCCCCChHHHHHHHH
Q psy259 217 VMLSGETAKGDYPVECVRAMH 237 (398)
Q Consensus 217 vmLS~ETA~G~yP~eaV~~m~ 237 (398)
|++. |+.-+ |-++.+.+.
T Consensus 201 v~vG--~al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 201 SVVG--GAITR-PKEITKRFV 218 (223)
T ss_dssp EEEC--HHHHC-HHHHHHHHH
T ss_pred EEEC--hHHcC-cHHHHHHHH
Confidence 9996 34333 655555443
No 289
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=24.69 E-value=2e+02 Score=27.33 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=36.0
Q ss_pred chhcCCcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc-----CCCEEE
Q psy259 116 TGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV-----GKPVIC 184 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~-----gkpvi~ 184 (398)
|.+.|..+.++.--++ .+.++++++..|||++.-|.-.+. | .......+.+++.+.+. +||+.-
T Consensus 61 l~~~G~~~~vv~~~~~---~~~i~~~l~~~dglil~GG~~~v~-p-~~~~~~~~~l~~~~~~~~~~g~~~PiLG 129 (315)
T 1l9x_A 61 LESAGARVVPVRLDLT---EKDYEILFKSINGILFPGGSVDLR-R-SDYAKVAKIFYNLSIQSFDDGDYFPVWG 129 (315)
T ss_dssp HHHTTCEEEEECSSCC---HHHHHHHHHHSSEEEECCCCCCTT-T-CHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHCCCEEEEEecCCC---HHHHHHHHhcCCEEEEeCCCcccC-h-hhhhHHHHHHHHHHHHHHhcCCCceEEE
Confidence 4445666666543333 345666678899999976633322 2 22222234555555555 699874
No 290
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=24.60 E-value=28 Score=33.19 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=27.5
Q ss_pred hcCCcEEEEECCCchHHHHHHhh----CCCCCEEEEeC
Q psy259 280 KVFAGAIVVLTTTGTSARLISKY----RPRCPIISVTR 313 (398)
Q Consensus 280 ~~~A~aIIv~T~SG~tA~~iSky----RP~~PIIAVT~ 313 (398)
...++.+||-|.+|.||..+|-- .|..+.+.+||
T Consensus 170 ~~~~DGlIVsTPTGSTAY~lSAGGpIv~P~~~~l~ltP 207 (278)
T 1z0s_A 170 RIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIP 207 (278)
T ss_dssp EEEESEEEEEESGGGGTHHHHTTCCEECTTSCCEEEEE
T ss_pred EEecCeEEEecCCchhHHHhhCCCceeCCCCCeEEEEE
Confidence 34689999999999999999964 45667777776
No 291
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.55 E-value=2.7e+02 Score=26.25 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=42.6
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++.....-+. +||+|+.+-.+.- .+.+.+...-+.|.+.+. +.|+++
T Consensus 77 ~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~--~lPiil 143 (303)
T 2wkj_A 77 AKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP-FSFEEHCDHYRAIIDSAD--GLPMVV 143 (303)
T ss_dssp HTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHHT--TCCEEE
T ss_pred hCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCC-CCHHHHHHHHHHHHHhCC--CCCEEE
Confidence 3557899998754 6677666665555 8999987655422 256777777777765442 289987
No 292
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=24.51 E-value=84 Score=28.22 Aligned_cols=72 Identities=15% Similarity=0.234 Sum_probs=42.9
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEee-cC-hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHc
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKI-EN-HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKV 178 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKI-E~-~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~ 178 (398)
.|..=+..+++. +.+.|.++.++.-- .+ ..-.+.++.+++. .|||++...+.. . ....++++.+.
T Consensus 18 ~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~------~----~~~~~~~~~~~ 85 (305)
T 3g1w_A 18 YWKRCLKGFEDA--AQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPV------E----LTDTINKAVDA 85 (305)
T ss_dssp HHHHHHHHHHHH--HHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTT------T----THHHHHHHHHT
T ss_pred HHHHHHHHHHHH--HHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHH------H----HHHHHHHHHHC
Confidence 343344566666 77777777664311 12 2233456665555 899999865431 1 12345677889
Q ss_pred CCCEEEe
Q psy259 179 GKPVICA 185 (398)
Q Consensus 179 gkpvi~A 185 (398)
|.||++.
T Consensus 86 ~iPvV~~ 92 (305)
T 3g1w_A 86 GIPIVLF 92 (305)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 9999984
No 293
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.44 E-value=1.3e+02 Score=28.42 Aligned_cols=84 Identities=14% Similarity=0.255 Sum_probs=53.0
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+ .|... ...++.+|-++||+|+| ++| ..+.+|...+..+..
T Consensus 64 ~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~~gk~v~~---------EKP~a~~~~~~~~l~~~a~ 123 (354)
T 3q2i_A 64 HASLTDMLAQTDADIVILT-------TPSGL----HPTQSIECSEAGFHVMT---------EKPMATRWEDGLEMVKAAD 123 (354)
T ss_dssp ESCHHHHHHHCCCSEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEC-------CCcHH----HHHHHHHHHHCCCCEEE---------eCCCcCCHHHHHHHHHHHH
Confidence 468899998 58999997 23332 23455678889999998 667 567778777776665
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.- .....-+.. .--+| +++.+.+++.+
T Consensus 124 ~~-g~~~~v~~~-~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 124 KA-KKHLFVVKQ-NRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp HH-TCCEEECCG-GGGSH--HHHHHHHHHHT
T ss_pred Hh-CCeEEEEEc-ccCCH--HHHHHHHHHhc
Confidence 42 222222222 12234 67777777664
No 294
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.39 E-value=2.3e+02 Score=21.65 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=33.5
Q ss_pred CcEEEEEC----CCchH-HHHHHhh-CCCCCEEEEeCChhhhh-hccccccceEEecCCC
Q psy259 283 AGAIVVLT----TTGTS-ARLISKY-RPRCPIISVTRFPQVAR-QLHLHRSIIPLVYEEP 335 (398)
Q Consensus 283 A~aIIv~T----~SG~t-A~~iSky-RP~~PIIAVT~n~~taR-qL~L~wGV~Pvl~~~~ 335 (398)
.+.||+-. .+|.. .+.+.+. .|.+|||.+|....... .-.+-.|+.-++.++.
T Consensus 53 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (136)
T 3hdv_A 53 IGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPV 112 (136)
T ss_dssp EEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred CcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCC
Confidence 56665532 23433 3455555 68999999998765432 2345678888887753
No 295
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=24.34 E-value=1.8e+02 Score=27.62 Aligned_cols=63 Identities=11% Similarity=0.146 Sum_probs=42.0
Q ss_pred cCCcccEEEeec---ChHHHhcHHHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIE---NHQGVKNLDEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE---~~~~v~n~deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.++.||+-+= +.++++....--+. +||+|+-+-... ...+.+.+...-+.|.+. .+.|+++
T Consensus 74 ~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a---~~lPiil 142 (309)
T 3fkr_A 74 VAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA---IAIPIMV 142 (309)
T ss_dssp HTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH---CSSCEEE
T ss_pred hCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHh---cCCCEEE
Confidence 356788998763 55666655555444 899999876543 344567777777766544 4788886
No 296
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=24.13 E-value=4e+02 Score=24.08 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=62.6
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
-|+++|+. . +..+-+=-||++++. -++...++ +|+|.+- .|-+ -. .-++.++.++++|+-+++
T Consensus 48 ~v~~lr~~--~---~~~~dvhLmv~dp~~--~i~~~~~aGAd~itvh-----~Ea~---~~-~~~~~i~~i~~~G~k~gv 111 (231)
T 3ctl_A 48 FVSQVKKL--A---TKPLDCHLMVTRPQD--YIAQLARAGADFITLH-----PETI---NG-QAFRLIDEIRRHDMKVGL 111 (231)
T ss_dssp HHHHHHTT--C---CSCEEEEEESSCGGG--THHHHHHHTCSEEEEC-----GGGC---TT-THHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhc--c---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEEC-----cccC---Cc-cHHHHHHHHHHcCCeEEE
Confidence 46677765 3 234556669998754 36777777 8999876 1220 11 124788999999999999
Q ss_pred eehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEe-cCccCCC--CChHHHHHHHHHH
Q psy259 185 ATQMLESMIKKPRATRAEISDVANAVLDGADCVML-SGETAKG--DYPVECVRAMHNT 239 (398)
Q Consensus 185 ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmL-S~ETA~G--~yP~eaV~~m~~I 239 (398)
+. ||. |..| ....+++++|-|++ |-+...| +|.-++++-++++
T Consensus 112 ~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~l 157 (231)
T 3ctl_A 112 IL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAEL 157 (231)
T ss_dssp EE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHH
T ss_pred EE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHH
Confidence 62 442 2221 23455679998863 5554333 3443444333333
No 297
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=24.04 E-value=1.9e+02 Score=22.78 Aligned_cols=59 Identities=5% Similarity=0.023 Sum_probs=32.3
Q ss_pred HHHHh-cCCcEEEEEC----CCch-HHHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 276 EAASK-VFAGAIVVLT----TTGT-SARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 276 ~~A~~-~~A~aIIv~T----~SG~-tA~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
....+ ...+.||+-. .+|. ..+.+.+..|.+|||.+|...... ..-.+-.|+.-++.++
T Consensus 43 ~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp 108 (154)
T 2qsj_A 43 AFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKS 108 (154)
T ss_dssp HHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTT
T ss_pred HHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCC
Confidence 33344 5677766532 2343 356666778999999999876432 2234567887777654
No 298
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=24.01 E-value=1.3e+02 Score=28.79 Aligned_cols=83 Identities=14% Similarity=0.300 Sum_probs=52.2
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+ .|... ...++.+|-++||+|+| ++| ..+.+|+..+..+..
T Consensus 54 ~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a~ 113 (359)
T 3e18_A 54 YESYEAVLADEKVDAVLIA-------TPNDS----HKELAISALEAGKHVVC---------EKPVTMTSEDLLAIMDVAK 113 (359)
T ss_dssp CSCHHHHHHCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEc-------CCcHH----HHHHHHHHHHCCCCEEe---------eCCCcCCHHHHHHHHHHHH
Confidence 467899998 58999998 23322 33456678899999998 677 567777777766654
Q ss_pred h-CCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 D-GADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
. |. ++.-+..- --+| .++.+.+++.+
T Consensus 114 ~~g~--~~~v~~~~-r~~p--~~~~~k~~i~~ 140 (359)
T 3e18_A 114 RVNK--HFMVHQNR-RWDE--DFLIIKEMFEQ 140 (359)
T ss_dssp HHTC--CEEEECGG-GGCH--HHHHHHHHHHH
T ss_pred HhCC--eEEEEeee-ccCH--HHHHHHHHHHc
Confidence 4 33 22222211 1123 56677777664
No 299
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=24.00 E-value=33 Score=33.27 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=27.7
Q ss_pred CCcEEEEECCCchHHHHHH-----hhCCCCCEEEEeCCh--hhhhhc
Q psy259 282 FAGAIVVLTTTGTSARLIS-----KYRPRCPIISVTRFP--QVARQL 321 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~iS-----kyRP~~PIIAVT~n~--~taRqL 321 (398)
.-+.+|++|.||.|+..+. |-+-++++|++|+++ ..+|..
T Consensus 99 ~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~a 145 (368)
T 1moq_A 99 RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRES 145 (368)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhC
Confidence 3468899999999986543 333128999999975 344444
No 300
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.99 E-value=4.4e+02 Score=24.54 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=0.0
Q ss_pred ChHHHhcHHHHHHh--cCeeEE-cCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 131 NHQGVKNLDEIIAE--ADGIMV-ARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 131 ~~~~v~n~deIl~~--sDgimv-aRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
+.++++++=+-+-. +|||++ |---=+..+..++-..+-+..++.++.. .|||+ .-...+-.|+-+.+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr-vpvia---------Gvg~~~t~~ai~la 95 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKR-VPVIA---------GTGANNTVEAIALS 95 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTS-SCEEE---------ECCCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCC-CcEEE---------eCCCcCHHHHHHHH
Q ss_pred HHHHh-CCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 208 NAVLD-GADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 208 nav~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
....+ |+|++|+..=--..--+-+.++....|+..+
T Consensus 96 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
No 301
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=23.93 E-value=1.1e+02 Score=29.51 Aligned_cols=84 Identities=21% Similarity=0.391 Sum_probs=53.8
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++|+++. .|.|+|+ .|... -..++.+|-++||+|+| ++| ..+.+|...+..+..
T Consensus 53 ~~~~~ell~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a~ 112 (387)
T 3moi_A 53 FATLAEMMQHVQMDAVYIA-------SPHQF----HCEHVVQASEQGLHIIV---------EKPLTLSRDEADRMIEAVE 112 (387)
T ss_dssp ESSHHHHHHHSCCSEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSCCCSCHHHHHHHHHHHH
T ss_pred ECCHHHHHcCCCCCEEEEc-------CCcHH----HHHHHHHHHHCCCceee---------eCCccCCHHHHHHHHHHHH
Confidence 4578999986 8999997 23322 23566788899999998 777 567778777776654
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.- ...+..+-. ..-.| .++.+.+++.+
T Consensus 113 ~~-g~~~~v~~~-~R~~p--~~~~~k~~i~~ 139 (387)
T 3moi_A 113 RA-GVHLVVGTS-RSHDP--VVRTLRAIVQE 139 (387)
T ss_dssp HH-TCCEEECCC-GGGSH--HHHHHHHHHHH
T ss_pred Hh-CCeEEEEec-cccCH--HHHHHHHHHhc
Confidence 42 222222221 12224 57777777764
No 302
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=23.91 E-value=1.1e+02 Score=29.14 Aligned_cols=84 Identities=11% Similarity=0.130 Sum_probs=54.1
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+ .|... -..++.+|-++||+|+| ++| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~~D~V~i~-------tp~~~----H~~~~~~al~aGk~Vl~---------EKPla~~~~e~~~l~~~a~ 115 (364)
T 3e82_A 56 IASPEAAVQHPDVDLVVIA-------SPNAT----HAPLARLALNAGKHVVV---------DKPFTLDMQEARELIALAE 115 (364)
T ss_dssp ESCHHHHHTCTTCSEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHCCCcEEE---------eCCCcCCHHHHHHHHHHHH
Confidence 468899998 58999998 23322 23456678899999998 777 567788888877765
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
..-=.+|. +..- --+| +++.+.+++.+
T Consensus 116 ~~g~~~~v-~~~~-r~~p--~~~~~~~~i~~ 142 (364)
T 3e82_A 116 EKQRLLSV-FHNR-RWDS--DYLGIRQVIEQ 142 (364)
T ss_dssp HTTCCEEE-CCCC-TTCH--HHHHHHHHHHH
T ss_pred HhCCeEEE-Eeec-ccCH--HHHHHHHHHHc
Confidence 53222232 2211 1224 56777777764
No 303
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.89 E-value=2.6e+02 Score=21.78 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=35.9
Q ss_pred HHHHHhcCCcEEEEEC----CCch-HHHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLT----TTGT-SARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T----~SG~-tA~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
.+...+...+.|++-- .+|. .++.+.+..|.+|||.+|...... ..-.+-.|+.-++.++.
T Consensus 42 l~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~ 108 (141)
T 3cu5_A 42 IQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPI 108 (141)
T ss_dssp HHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCC
Confidence 3444445667776532 2454 345666677999999999876543 23345678888887653
No 304
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=23.86 E-value=1.5e+02 Score=28.00 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=53.5
Q ss_pred HHhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHH
Q psy259 134 GVKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav 210 (398)
...+++++++. .|.|+|+ .|... -..++.+|-++||+|+| ++|. .|.+|...+..+.
T Consensus 70 ~~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 129 (340)
T 1zh8_A 70 VFDSYEELLESGLVDAVDLT-------LPVEL----NLPFIEKALRKGVHVIC---------EKPISTDVETGKKVVELS 129 (340)
T ss_dssp EESCHHHHHHSSCCSEEEEC-------CCGGG----HHHHHHHHHHTTCEEEE---------ESSSSSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CCchH----HHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHH
Confidence 34679999974 8999998 23332 24566788899999998 6764 5778888887776
Q ss_pred HhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 211 LDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 211 ~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
...-=-+|. +..- --+| +++.+.+++++
T Consensus 130 ~~~g~~~~v-~~~~-R~~p--~~~~~k~~i~~ 157 (340)
T 1zh8_A 130 EKSEKTVYI-AENF-RHVP--AFWKAKELVES 157 (340)
T ss_dssp HHCSSCEEE-ECGG-GGCH--HHHHHHHHHHT
T ss_pred HHcCCeEEE-Eecc-cCCH--HHHHHHHHHhc
Confidence 543222332 2211 1123 56666666653
No 305
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=23.77 E-value=2.5e+02 Score=21.65 Aligned_cols=61 Identities=13% Similarity=0.097 Sum_probs=38.1
Q ss_pred HHHHHHhcCCcEEEEECC----CchH-HHHHHh--hCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 274 AVEAASKVFAGAIVVLTT----TGTS-ARLISK--YRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T~----SG~t-A~~iSk--yRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
|.+...+...+.||+-.. +|.. .+.+.+ ..|.+|||++|...... ..-.+--|+.-++.++
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp 111 (144)
T 3kht_A 43 ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKS 111 (144)
T ss_dssp HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECC
T ss_pred HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECC
Confidence 344445566787776443 3332 345555 56899999999765433 2334567888888765
No 306
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=23.69 E-value=4.5e+02 Score=24.44 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=55.9
Q ss_pred hHHHhc-HHHHHH-h-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhH
Q psy259 132 HQGVKN-LDEIIA-E-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDV 206 (398)
Q Consensus 132 ~~~v~n-~deIl~-~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDV 206 (398)
.+++++ ++-.++ . +|||++. |=-| ..+..++-..+-+..++.++ -..|||+- -...+-.|+-+.
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~l 91 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQ---------VGSVNLKEAVEL 91 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------cCCCCHHHHHHH
Confidence 345544 455566 4 8999986 4211 12233333333333333332 24688863 234444555554
Q ss_pred HH-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 207 AN-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 207 an-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
+. |-..|+|++|+..=--..--+-+.++....|+..+.-
T Consensus 92 a~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (293)
T 1f6k_A 92 GKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGS 131 (293)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 44 4456999999975433333356667777788776653
No 307
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=23.63 E-value=2.9e+02 Score=25.75 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=68.2
Q ss_pred ccEEEeecChHHHhcHHHHHHh-cCeeEEc--CCCC----CCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcC
Q psy259 123 IKIIAKIENHQGVKNLDEIIAE-ADGIMVA--RGDL----GIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKK 195 (398)
Q Consensus 123 ~~iiaKIE~~~~v~n~deIl~~-sDgimva--RgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~ 195 (398)
+++.+-+.+.++ ++..++. .|.|.|. -.|. -+....++.....+..++.|+++|++|-+..-+- ..+
T Consensus 74 ~~~~~l~~~~~~---i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~---~~~ 147 (298)
T 2cw6_A 74 INYPVLTPNLKG---FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCA---LGC 147 (298)
T ss_dssp CBCCEECCSHHH---HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETT---TCB
T ss_pred CEEEEEcCCHHh---HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE---eeC
Confidence 333333345443 4444444 6766553 1221 0123456777778889999999999986532111 222
Q ss_pred C---CCCchhhhhHHHH-HHhCCcEEEecCccCCCCChHHHHHHHHHHHHHH
Q psy259 196 P---RATRAEISDVANA-VLDGADCVMLSGETAKGDYPVECVRAMHNTCKEA 243 (398)
Q Consensus 196 ~---~PtraEvsDVana-v~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~a 243 (398)
| +-+..++-+++.+ ...|+|.+.|. +|.=...|.+.-+.+..+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 148 PYEGKISPAKVAEVTKKFYSMGCYEISLG-DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTTBSCCHHHHHHHHHHHHHTTCSEEEEE-ETTSCCCHHHHHHHHHHHHHHS
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 2 2233445555543 45799999997 6777778999888888776644
No 308
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=23.50 E-value=2.3e+02 Score=21.01 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=37.0
Q ss_pred HhcCCcEEEEEC----CCch-HHHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 279 SKVFAGAIVVLT----TTGT-SARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 279 ~~~~A~aIIv~T----~SG~-tA~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
.+...+.|++=- .+|. ..+.+.+..|..||+.+|...... ..-.+-.|+.-++.++.
T Consensus 44 ~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~ 106 (120)
T 1tmy_A 44 KELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPF 106 (120)
T ss_dssp HHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSC
T ss_pred HhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeCCC
Confidence 344567666543 2443 345666677999999999876543 23345678888887653
No 309
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=23.39 E-value=1.1e+02 Score=28.69 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=52.6
Q ss_pred HHhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHH
Q psy259 134 GVKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAV 210 (398)
Q Consensus 134 ~v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav 210 (398)
...+++++++. .|.|+|+ .|... ...++.+|-++||+|+| ++| ..+.+|+..+..+.
T Consensus 54 ~~~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~~Gk~vl~---------EKP~a~~~~e~~~l~~~a 113 (344)
T 3mz0_A 54 VYPNDDSLLADENVDAVLVT-------SWGPA----HESSVLKAIKAQKYVFC---------EKPLATTAEGCMRIVEEE 113 (344)
T ss_dssp EESSHHHHHHCTTCCEEEEC-------SCGGG----HHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEC-------CCchh----HHHHHHHHHHCCCcEEE---------cCCCCCCHHHHHHHHHHH
Confidence 34678999986 8999997 23332 23455678899999998 777 56777777776665
Q ss_pred Hh-CCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 211 LD-GADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 211 ~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.. |.-.+|..--. --+| +++.+.+++.+
T Consensus 114 ~~~g~~~~~v~~~~--r~~p--~~~~~k~~i~~ 142 (344)
T 3mz0_A 114 IKVGKRLVQVGFMR--RYDS--GYVQLKEALDN 142 (344)
T ss_dssp HHHSSCCEEECCGG--GGSH--HHHHHHHHHHT
T ss_pred HHHCCEEEEEeccc--ccCH--HHHHHHHHHHc
Confidence 43 44333442111 1123 56666666653
No 310
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=23.37 E-value=1.8e+02 Score=26.07 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEee--cChH-HHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKI--ENHQ-GVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK 177 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKI--E~~~-~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~ 177 (398)
.|..=+..+++. +.+.|-++.+..-= ++.+ -.+.++.++.. .|||++...|.. .+ ...++++++
T Consensus 17 ~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~------~~----~~~~~~~~~ 84 (297)
T 3rot_A 17 YWTSLFQGAKKA--AEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDT------AF----SKSLQRANK 84 (297)
T ss_dssp HHHHHHHHHHHH--HHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSS------TT----HHHHHHHHH
T ss_pred hHHHHHHHHHHH--HHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHH------HH----HHHHHHHHH
Confidence 343334556666 66667666554411 1322 33556666655 899999865431 11 234667888
Q ss_pred cCCCEEEe
Q psy259 178 VGKPVICA 185 (398)
Q Consensus 178 ~gkpvi~A 185 (398)
.|.||++.
T Consensus 85 ~giPvV~~ 92 (297)
T 3rot_A 85 LNIPVIAV 92 (297)
T ss_dssp HTCCEEEE
T ss_pred CCCCEEEE
Confidence 99999984
No 311
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.37 E-value=2.5e+02 Score=21.39 Aligned_cols=57 Identities=18% Similarity=0.076 Sum_probs=36.2
Q ss_pred HHHhcCCcEEEEEC-----CCchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 277 AASKVFAGAIVVLT-----TTGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 277 ~A~~~~A~aIIv~T-----~SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
...+...+.||+-. .+|.. .+.+.+. |.+|||++|...... ..-.+-.|+.-++.++
T Consensus 49 ~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp 112 (140)
T 3cg0_A 49 CAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFITSSQDVETFQRAKRVNPFGYLAKP 112 (140)
T ss_dssp HHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEEECCCCHHHHHHHHTTCCSEEEEES
T ss_pred HHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHhcCCCEEEeCC
Confidence 33444677777642 23432 3455555 999999999876543 3345678888888765
No 312
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=23.23 E-value=1.2e+02 Score=26.77 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=35.5
Q ss_pred ChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHH-------HcCCCEEEe
Q psy259 131 NHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCN-------KVGKPVICA 185 (398)
Q Consensus 131 ~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~-------~~gkpvi~A 185 (398)
.++.+..+-+-++.+||++|+--..--.+| -.-|..+.-+- -.||||.+.
T Consensus 54 ~p~~~~~l~~~i~~aD~~ii~tPeYn~s~p-----g~LKn~iDwlsr~~~~~~~~gKpv~~v 110 (190)
T 3u7r_A 54 APESVLRLKDRIEHSDAVLAITPEYNRSYP-----GMIKNAIDWATRPYGQNSWKGKPAAVI 110 (190)
T ss_dssp CCHHHHHHHHHHHTSSEEEEECCCBTTBCC-----HHHHHHHHHHHCSTTCCTTTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCcEEEechhhcccCC-----HHHHHHHHHhcccccCCccCCCEEEEE
Confidence 467888888999999999999555544444 34455665552 368999874
No 313
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=23.13 E-value=1.4e+02 Score=28.38 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=54.1
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsDVanav~ 211 (398)
..+++++++- .|.|+|+=.. . .-..++.+|-++||+|+| ++|. .+.+|...+..+..
T Consensus 72 ~~~~~~ll~~~~iD~V~i~tp~-------~----~h~~~~~~al~~Gk~V~~---------EKP~a~~~~~~~~l~~~a~ 131 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFFDAATT-------Q----ARPGLLTQAINAGKHVYC---------EKPIATNFEEALEVVKLAN 131 (383)
T ss_dssp ESCHHHHHHCSSCCEEEECSCS-------S----SSHHHHHHHHTTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEECCCc-------h----HHHHHHHHHHHCCCeEEE---------cCCCCCCHHHHHHHHHHHH
Confidence 3689999986 8999998332 1 114467888899999998 7775 67778877777665
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.- .....-+... .-+| .++.+.+++.+
T Consensus 132 ~~-~~~~~v~~~~-r~~p--~~~~~~~~i~~ 158 (383)
T 3oqb_A 132 SK-GVKHGTVQDK-LFLP--GLKKIAFLRDS 158 (383)
T ss_dssp HT-TCCEEECCGG-GGSH--HHHHHHHHHHT
T ss_pred Hc-CCeEEEEecc-ccCH--HHHHHHHHHHc
Confidence 42 2233333322 2234 56667766654
No 314
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=23.13 E-value=1.5e+02 Score=26.90 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=45.1
Q ss_pred CcccHHHHHHHHHHhhchhcCCcccEEEeecCh-HHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy259 100 PNLYESNVRLIEKLMATGEQGKHIKIIAKIENH-QGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK 177 (398)
Q Consensus 100 ~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~-~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~ 177 (398)
+-.|..=+..+.+. +.+.|-++.+..-=.+. .-.+.++.+++. .|||++...|- + .....++++.+
T Consensus 15 ~~~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~------~----~~~~~~~~~~~ 82 (330)
T 3uug_A 15 SARWIDDGNNIVKQ--LQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG------T----TLSDVLKQAGE 82 (330)
T ss_dssp STHHHHHHHHHHHH--HHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG------G----GGHHHHHHHHH
T ss_pred chHHHHHHHHHHHH--HHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc------h----hHHHHHHHHHH
Confidence 33444445566666 77777776665422222 234556666655 89999986541 1 12235677889
Q ss_pred cCCCEEEe
Q psy259 178 VGKPVICA 185 (398)
Q Consensus 178 ~gkpvi~A 185 (398)
.|.||++-
T Consensus 83 ~giPvV~~ 90 (330)
T 3uug_A 83 QGIKVIAY 90 (330)
T ss_dssp TTCEEEEE
T ss_pred CCCCEEEE
Confidence 99999974
No 315
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=23.00 E-value=19 Score=33.22 Aligned_cols=55 Identities=22% Similarity=0.236 Sum_probs=37.1
Q ss_pred ccHH--HHHHHHHHhhchh---cC--CcccEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhh
Q psy259 102 LYES--NVRLIEKLMATGE---QG--KHIKIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWK 163 (398)
Q Consensus 102 ~~vd--dV~~ir~~~~l~~---~~--~~~~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~ 163 (398)
+|+| |+.++|++ +.. .| -+..|++| +...=-+.+.||++..|| ||++++|+...+
T Consensus 3 ~~~Dtad~~~i~~~--~~~g~i~GvTTNPsii~k-~~~~~~~~i~ei~~~v~G----~~~VS~EV~a~d 64 (220)
T 1l6w_A 3 LYLDTSDVVAVKAL--SRIFPLAGVTTNPSIIAA-GKKPLDVVLPQLHEAMGG----QGRLFAQVMATT 64 (220)
T ss_dssp EEEECCCHHHHHHH--HTTSCCCEEECCHHHHHH-HCSCHHHHHHHHHHHTTT----CSEEEEECCCSS
T ss_pred EEecCCCHHHHHHH--HhcCCcCceeeCHHHHHh-cCCCHHHHHHHHHHhcCC----CceEEEEEccCC
Confidence 5677 89999998 533 12 36788888 543334556777777776 667888886533
No 316
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=22.97 E-value=53 Score=31.22 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=26.5
Q ss_pred cEEEEECCCchHHHHHH---hhCCCCCEEEEeCC-hhhhhhc
Q psy259 284 GAIVVLTTTGTSARLIS---KYRPRCPIISVTRF-PQVARQL 321 (398)
Q Consensus 284 ~aIIv~T~SG~tA~~iS---kyRP~~PIIAVT~n-~~taRqL 321 (398)
+.+|++|.||.|+..+. ..| +++|++|++ -..++..
T Consensus 81 dlvI~iS~SG~T~e~l~a~~~ak--a~viaIT~~~S~La~~a 120 (325)
T 2e5f_A 81 ELAVGISRSGETTEILLALEKIN--VKKLGITTRESSLTRMC 120 (325)
T ss_dssp SEEEEECSSSCCHHHHHHHHTCC--SCEEEEESSSCHHHHHS
T ss_pred eEEEEEeCCCCCHHHHHHHHHhC--CCEEEEECCCCHHHHhc
Confidence 68999999999986544 334 999999996 2334443
No 317
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=22.95 E-value=1.9e+02 Score=21.85 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=34.3
Q ss_pred CcEEEEECC----CchH-HHHHHhhCCCCCEEEEeCChhh------hhhccccccceEEecCCC
Q psy259 283 AGAIVVLTT----TGTS-ARLISKYRPRCPIISVTRFPQV------ARQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 283 A~aIIv~T~----SG~t-A~~iSkyRP~~PIIAVT~n~~t------aRqL~L~wGV~Pvl~~~~ 335 (398)
.+.||+-.. +|.. .+.+.+..|.+|||.+|..... .....+--|+.-++.++.
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~ 110 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPI 110 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCC
Confidence 566665432 2322 4556667799999999988762 223356678888887753
No 318
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=22.94 E-value=81 Score=31.54 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=42.5
Q ss_pred cEEEeecChHHHhcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 124 KIIAKIENHQGVKNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 124 ~iiaKIE~~~~v~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+-||-.--.-+||+.++-+|-|+-+=|=|=-+.-.-|+|. .+.+.|+++|||||.
T Consensus 267 ~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPvia 324 (383)
T 3cwc_A 267 QLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIG 324 (383)
T ss_dssp EEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEE
T ss_pred EEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEE
Confidence 4555566666666999999999999999887766666677764 456689999999996
No 319
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.92 E-value=16 Score=30.14 Aligned_cols=53 Identities=28% Similarity=0.319 Sum_probs=34.5
Q ss_pred chhcCCcccEEEeecChHHH--hcH--HHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 116 TGEQGKHIKIIAKIENHQGV--KNL--DEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 116 l~~~~~~~~iiaKIE~~~~v--~n~--deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
|....++..+=.|+|++.++ +|- ++-++.+|+|+++ +|-.++ .+ |-.|||++-
T Consensus 25 L~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA-~d~~v~--~~-------------RF~GK~v~~ 81 (106)
T 2r4q_A 25 LKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVA-ADKQVE--ME-------------RFKGKRVLQ 81 (106)
T ss_dssp HHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEE-ESSCCC--CG-------------GGTTSBEEE
T ss_pred HHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEE-eCCccC--Hh-------------HcCCCeEEE
Confidence 33333344455677877654 442 4456889999999 887766 33 457888886
No 320
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=22.91 E-value=1.3e+02 Score=29.11 Aligned_cols=85 Identities=11% Similarity=0.145 Sum_probs=55.6
Q ss_pred HHhcHHHHHHh-------cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCC-CCchhhhh
Q psy259 134 GVKNLDEIIAE-------ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPR-ATRAEISD 205 (398)
Q Consensus 134 ~v~n~deIl~~-------sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~-PtraEvsD 205 (398)
...+++++++. .|.|+|+= |.. ....++.+|-++||+|+| ++|. .+.+|+..
T Consensus 68 ~~~~~~~ll~~~~~~~~~vD~V~i~t-------p~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~ 127 (398)
T 3dty_A 68 CYADYLSMFEQEARRADGIQAVSIAT-------PNG----THYSITKAALEAGLHVVC---------EKPLCFTVEQAEN 127 (398)
T ss_dssp BCSSHHHHHHHHTTCTTCCSEEEEES-------CGG----GHHHHHHHHHHTTCEEEE---------CSCSCSCHHHHHH
T ss_pred eeCCHHHHHhcccccCCCCCEEEECC-------CcH----HHHHHHHHHHHCCCeEEE---------eCCCcCCHHHHHH
Confidence 45689999986 89999972 322 234567788899999998 7775 56677777
Q ss_pred HHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 206 VANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 206 Vanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
+..+...- ..+..-+..-.. +| +++.+++++.+
T Consensus 128 l~~~a~~~-g~~~~v~~~~r~-~p--~~~~~k~~i~~ 160 (398)
T 3dty_A 128 LRELSHKH-NRIVGVTYGYAG-HQ--LIEQAREMIAA 160 (398)
T ss_dssp HHHHHHHT-TCCEEECCGGGG-SH--HHHHHHHHHHT
T ss_pred HHHHHHHc-CCeEEEEecccC-CH--HHHHHHHHHhc
Confidence 77776553 333333333222 23 66777777654
No 321
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=22.78 E-value=87 Score=29.45 Aligned_cols=83 Identities=12% Similarity=0.090 Sum_probs=50.9
Q ss_pred hcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCc
Q psy259 136 KNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGAD 215 (398)
Q Consensus 136 ~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D 215 (398)
++++++++.+|.|+-. . ++ ..-...+..|.++|||+++.|- -.+..+...+..+... =
T Consensus 65 ~dl~~ll~~~DVVIDf----T---~p----~a~~~~~~~al~~G~~vVigTT---------G~s~~~~~~L~~aa~~--~ 122 (272)
T 4f3y_A 65 DDIERVCAEADYLIDF----T---LP----EGTLVHLDAALRHDVKLVIGTT---------GFSEPQKAQLRAAGEK--I 122 (272)
T ss_dssp CCHHHHHHHCSEEEEC----S---CH----HHHHHHHHHHHHHTCEEEECCC---------CCCHHHHHHHHHHTTT--S
T ss_pred CCHHHHhcCCCEEEEc----C---CH----HHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHHhcc--C
Confidence 6789988889988743 2 22 3345678899999999999652 2344445555555443 3
Q ss_pred EEEecCccCCCCChHHHHHHHHHHHHHHHhh
Q psy259 216 CVMLSGETAKGDYPVECVRAMHNTCKEAEAA 246 (398)
Q Consensus 216 ~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~ 246 (398)
.++.|.=.+ +-++ .|.++++.+=+.
T Consensus 123 ~vv~a~N~s-----~Gv~-l~~~~~~~aa~~ 147 (272)
T 4f3y_A 123 ALVFSANMS-----VGVN-VTMKLLEFAAKQ 147 (272)
T ss_dssp EEEECSCCC-----HHHH-HHHHHHHHHHHH
T ss_pred CEEEECCCC-----HHHH-HHHHHHHHHHHh
Confidence 466665444 4444 444555544443
No 322
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=22.74 E-value=3.3e+02 Score=25.44 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=43.4
Q ss_pred hcCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 118 EQGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 118 ~~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
..+.+++||+-+=. .++++....--+. +||+|+.+-.+.-..+.+.+...-+.|.+.+-+-+.|+++
T Consensus 68 ~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiil 138 (294)
T 3b4u_A 68 AGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILV 138 (294)
T ss_dssp TTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEE
T ss_pred HhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 34567899998754 6666666655555 8999998765533135577776666665433111799997
No 323
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=22.70 E-value=3.3e+02 Score=23.89 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=39.9
Q ss_pred hcCCcEEEEECCC----------chHHHHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCCCCCCcccCHHHHHH
Q psy259 280 KVFAGAIVVLTTT----------GTSARLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEPSPADWLRDVDTRVA 349 (398)
Q Consensus 280 ~~~A~aIIv~T~S----------G~tA~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~~~~~w~~d~d~~I~ 349 (398)
+.+++.||+-+.. |.++..+.+.-| ||++.+-+... ....+++.-. .....+..+.
T Consensus 107 ~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~-~PVlvv~~~~~---------~~~~ilv~~d----~s~~~~~al~ 172 (268)
T 3ab8_A 107 ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASP-VPVLLAPGEPV---------ELEGALLGYD----ASESAVRALH 172 (268)
T ss_dssp HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCS-SCEEEECSSCC---------CCCEEEEECC----SCHHHHHHHH
T ss_pred ccCCCEEEEeccCCCccccccccchhHHHHHHhCC-CCEEEECCCCC---------CCCEEEEEEC----CCHHHHHHHH
Confidence 6689999988752 457788887765 99999876543 1223444321 1233445666
Q ss_pred HHHHHHHHc
Q psy259 350 HGIKYGRDR 358 (398)
Q Consensus 350 ~ai~~ake~ 358 (398)
++.+.++..
T Consensus 173 ~a~~la~~~ 181 (268)
T 3ab8_A 173 ALAPLARAL 181 (268)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhhcC
Confidence 666666553
No 324
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=22.64 E-value=5.1e+02 Score=24.71 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=50.9
Q ss_pred HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHH-HHHhCC
Q psy259 139 DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVAN-AVLDGA 214 (398)
Q Consensus 139 deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVan-av~dG~ 214 (398)
+-.++. +|||++. |=-| ..+..++-..+-+..++.++ -..|||+-| ...+-.|+-+.+. |-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGI---------GALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 444455 8999986 4221 12223332233333333332 247888632 2344455555554 445699
Q ss_pred cEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 215 DCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 215 D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
|++|+..=--..-=+-+.++....|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997543333234566777777776554
No 325
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=22.61 E-value=3.7e+02 Score=25.29 Aligned_cols=19 Identities=16% Similarity=0.064 Sum_probs=9.6
Q ss_pred HHHHHHHcCCCCCCCeEEEEec
Q psy259 351 GIKYGRDRKFLNQGDPVIVVTG 372 (398)
Q Consensus 351 ai~~ake~Glik~GD~VVVvsG 372 (398)
+.+...+.+ .-|.||+-.|
T Consensus 168 ~~Ei~~q~~---~~d~vv~pvG 186 (325)
T 3dwg_A 168 GPELLADLP---EITHFVAGLG 186 (325)
T ss_dssp HHHHHHHCT---TCCEEEEECS
T ss_pred HHHHHHhcC---CCCEEEEecC
Confidence 345555543 1466665544
No 326
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=22.53 E-value=1.3e+02 Score=25.62 Aligned_cols=60 Identities=7% Similarity=-0.030 Sum_probs=37.9
Q ss_pred HHHHHHhcCCcEEEEECCCchH-HHHHHhhCC-CCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 274 AVEAASKVFAGAIVVLTTTGTS-ARLISKYRP-RCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 274 av~~A~~~~A~aIIv~T~SG~t-A~~iSkyRP-~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
|.+...+...+.|+....+|.. ++.+-+. | .+|||.+|...... ..-.+-.|+.-++.++
T Consensus 36 al~~l~~~~~dlvilp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp 98 (223)
T 2hqr_A 36 GEYLMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKP 98 (223)
T ss_dssp HHHHHTTSCCSEEEECCTTHHHHHHHHHHH-CTTSEEEEEESSCCHHHHHHHHHHTCSEEEETT
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCCCcEEEEECCCCHHHHHHHHHcCCCEEEECC
Confidence 3344445567877733345544 3445455 7 89999999875443 3334677888888765
No 327
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=22.52 E-value=2.3e+02 Score=27.90 Aligned_cols=118 Identities=14% Similarity=0.007 Sum_probs=67.1
Q ss_pred HHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHhhhhh
Q psy259 170 QMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEAAIWH 249 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 249 (398)
-+...|+..|.++++- | |....-.-+...-..|++.+++.+ .|.|. +++....+++.+ +..+ +
T Consensus 159 AlA~aaa~~Gl~~~iv------m-----p~~~~~~k~~~~~~~GAeVv~~v~---~~~~~-da~~~a~~~~~~-~g~~-~ 221 (389)
T 1wkv_A 159 ALSAVARLYGYRARVY------L-----PGAAEEFGKLLPRLLGAQVIVDPE---APSTV-HLLPRVMKDSKN-EGFV-H 221 (389)
T ss_dssp HHHHHHHHTTCEEEEE------E-----ETTSCHHHHHHHHHTTCEEEEETT---CSSSG-GGHHHHHHHHHH-HCCE-E
T ss_pred HHHHHHHHcCCeEEEE------E-----CCCCCHHHHHHHHHcCCEEEEEcC---CCCHH-HHHHHHHHHHHc-cCcE-e
Confidence 4567789999999884 1 211122345666778999883332 13443 455544444332 1111 1
Q ss_pred hHHHHHHhhcCCCCC-ChHHHHH---HHHHHHHHhc-----CCcEEEEECCCchHHHHHHh----hCCCCCEEEEeCCh
Q psy259 250 TKLLTELKSMLPLPI-DSAHSVA---IAAVEAASKV-----FAGAIVVLTTTGTSARLISK----YRPRCPIISVTRFP 315 (398)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~~~~ia---~aav~~A~~~-----~A~aIIv~T~SG~tA~~iSk----yRP~~PIIAVT~n~ 315 (398)
..+- ++...++ ..+.++..++ ..++||+.+=+|.++.-+++ ..|.+.|++|.+..
T Consensus 222 -----------~~p~~N~~~~~~~~~t~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~ 289 (389)
T 1wkv_A 222 -----------VNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQ 289 (389)
T ss_dssp -----------CCTTTCHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECT
T ss_pred -----------cCcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCC
Confidence 0111 1222222 1233444444 46899999999999876654 37999999999853
No 328
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.49 E-value=2.5e+02 Score=26.40 Aligned_cols=62 Identities=15% Similarity=0.197 Sum_probs=41.6
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++.....-+. +||+|+.+-...- .+.+.+...-+.|.+ ..+.|+++
T Consensus 66 ~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~---a~~lPiil 131 (297)
T 2rfg_A 66 AQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNR-PSQEGLYQHFKMVHD---AIDIPIIV 131 (297)
T ss_dssp HTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTC-CCHHHHHHHHHHHHH---HCSSCEEE
T ss_pred hCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHH---hcCCCEEE
Confidence 3557889988754 6677666665555 8999998665422 255667666666654 45788886
No 329
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=22.45 E-value=2.6e+02 Score=21.30 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=37.0
Q ss_pred HhcCCcEEEEECC----Cch-HHHHHHhhCCCCCEEEEeCChhh-hhhccccccceEEecCC
Q psy259 279 SKVFAGAIVVLTT----TGT-SARLISKYRPRCPIISVTRFPQV-ARQLHLHRSIIPLVYEE 334 (398)
Q Consensus 279 ~~~~A~aIIv~T~----SG~-tA~~iSkyRP~~PIIAVT~n~~t-aRqL~L~wGV~Pvl~~~ 334 (398)
.+...+.||+-.. +|. ..+.+.+..|.+|||++|..... ...-.+-.|+.-++.++
T Consensus 48 ~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP 109 (137)
T 3hdg_A 48 GLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKP 109 (137)
T ss_dssp HHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSS
T ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCC
Confidence 4446777666432 343 34566777799999999987653 23334677888887765
No 330
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.42 E-value=2.5e+02 Score=21.01 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=36.0
Q ss_pred HhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 279 SKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 279 ~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
.+...+.|++-- .+|.. ++.+.+..|.+||+.+|...... ..-.+-.|+..++.++
T Consensus 44 ~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP 105 (124)
T 1srr_A 44 TKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKP 105 (124)
T ss_dssp HHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESS
T ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCC
Confidence 344677777642 24543 45666678999999999865432 2334556888888764
No 331
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=22.28 E-value=4.7e+02 Score=24.26 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=54.3
Q ss_pred hHHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 132 HQGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 132 ~~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
.++++++ +-.++. +|||++. |=-| ..+..++-..+-+..++.++. ..|||+- -...+-.|+-+.+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~~~t~~ai~la 88 (294)
T 2ehh_A 20 YEALGNLIEFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAG---------TGGNATHEAVHLT 88 (294)
T ss_dssp HHHHHHHHHHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEE---------CCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEe---------cCCCCHHHHHHHH
Confidence 3455443 444444 8999986 3211 122233322333333333321 4688863 3344555665555
Q ss_pred H-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 208 N-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 208 n-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
. |-..|+|++|+..=--..-=+-+.++....|+..+.
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 89 AHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4 455699999997543333334566777777776554
No 332
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=22.25 E-value=2.1e+02 Score=27.92 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=24.5
Q ss_pred hhHHHHHHhCCcEEEecCccC-CCCChHHHHHHHHHHHHHHHhhh
Q psy259 204 SDVANAVLDGADCVMLSGETA-KGDYPVECVRAMHNTCKEAEAAI 247 (398)
Q Consensus 204 sDVanav~dG~D~vmLS~ETA-~G~yP~eaV~~m~~I~~~aE~~~ 247 (398)
.|+..++..|||+||+..--- .| | .+..+|.++.+..+
T Consensus 290 ~da~~~l~aGAd~V~vgra~l~~G--P----~~~~~i~~~l~~~m 328 (354)
T 4ef8_A 290 EDAFLHVLAGASMVQVGTALQEEG--P----SIFERLTSELLGVM 328 (354)
T ss_dssp HHHHHHHHHTEEEEEECHHHHHHC--T----THHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEhHHHHHhC--H----HHHHHHHHHHHHHH
Confidence 588999999999999953211 01 2 34566666666543
No 333
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=22.23 E-value=3e+02 Score=26.38 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=49.1
Q ss_pred HHHHHHHHhhchhcCCcccEEEeecChH------HHhcHHHHHH----h-cCeeEEcCCCCCCC-CC-hhhHHHHHHHHH
Q psy259 106 NVRLIEKLMATGEQGKHIKIIAKIENHQ------GVKNLDEIIA----E-ADGIMVARGDLGIE-IP-PWKVFLAQKQMI 172 (398)
Q Consensus 106 dV~~ir~~~~l~~~~~~~~iiaKIE~~~------~v~n~deIl~----~-sDgimvaRgDLg~e-~~-~~~v~~~qk~ii 172 (398)
=|+.+|+. + +..|..||---+ .++..-++++ . +|.|-|.-|.+.-. ++ .+. .+..++
T Consensus 200 iv~avr~~--v-----~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~---~~~~~~ 269 (340)
T 3gr7_A 200 VIDAVREV--W-----DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPG---YQVPFA 269 (340)
T ss_dssp HHHHHHHH--C-----CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT---TTHHHH
T ss_pred HHHHHHHh--c-----CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcc---ccHHHH
Confidence 45566666 4 456777885321 1233333333 2 79998865533211 11 011 122233
Q ss_pred HHHH-HcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhC-CcEEEec
Q psy259 173 AKCN-KVGKPVICATQMLESMIKKPRATRAEISDVANAVLDG-ADCVMLS 220 (398)
Q Consensus 173 ~~c~-~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG-~D~vmLS 220 (398)
+..+ ..+.|||....+ -|. .|...++..| +|+|++.
T Consensus 270 ~~ik~~~~iPVi~~GgI---------~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 270 ELIRREADIPTGAVGLI---------TSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp HHHHHHTTCCEEEESSC---------CCH---HHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHcCCcEEeeCCC---------CCH---HHHHHHHHCCCeeEEEec
Confidence 3333 358999974322 122 3556788888 9999995
No 334
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=22.22 E-value=54 Score=31.55 Aligned_cols=33 Identities=12% Similarity=0.322 Sum_probs=23.3
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCCh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFP 315 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~ 315 (398)
.-+.+|++|.||.|+..+ +|-+ .+++|++|+++
T Consensus 102 ~~dlvI~iS~SG~t~e~~~a~~~ak~~-Ga~vi~IT~~~ 139 (355)
T 2a3n_A 102 KDSVVITLSKSGDTKESVAIAEWCKAQ-GIRVVAITKNA 139 (355)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEESCT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 346788888888877543 3444 68888888864
No 335
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=22.19 E-value=49 Score=29.26 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.9
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|-+ .+|+|++|.++.
T Consensus 114 ~~Dvvi~iS~SG~t~~~~~~~~~ak~~-g~~vi~iT~~~~ 152 (201)
T 3trj_A 114 EDDILLVITTSGDSENILSAVEEAHDL-EMKVIALTGGSG 152 (201)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEEETTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 447899999999987543 4444 799999998653
No 336
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=22.13 E-value=4.9e+02 Score=24.40 Aligned_cols=46 Identities=17% Similarity=0.088 Sum_probs=33.8
Q ss_pred HHHhcCCcEEEEECCCchHHHHHHhhCCCCCEEEEeCChhhhhhccc
Q psy259 277 AASKVFAGAIVVLTTTGTSARLISKYRPRCPIISVTRFPQVARQLHL 323 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~SG~tA~~iSkyRP~~PIIAVT~n~~taRqL~L 323 (398)
+-.+.+|.+|++--..-..++.+++-= ++|+|.+-..+.+=-|...
T Consensus 169 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGag~~~dgQvLV 214 (264)
T 1m3u_A 169 ALEAAGAQLLVLECVPVELAKRITEAL-AIPVIGIGAGNVTDGQILV 214 (264)
T ss_dssp HHHHHTCCEEEEESCCHHHHHHHHHHC-SSCEEEESSCTTSSEEEEC
T ss_pred HHHHCCCcEEEEecCCHHHHHHHHHhC-CCCEEEeCCCCCCCcceee
Confidence 334569999998776657788888765 4999999887766666544
No 337
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=22.12 E-value=86 Score=32.42 Aligned_cols=66 Identities=6% Similarity=-0.028 Sum_probs=46.6
Q ss_pred HHHHHHhhchhcCCcccEEEeecChHHH-hcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 108 RLIEKLMATGEQGKHIKIIAKIENHQGV-KNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 108 ~~ir~~~~l~~~~~~~~iiaKIE~~~~v-~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+++. |.+.+..+.|.+--+....+ +|.++++.-.|.|+.+-.+ +..+..+-+.|.++|+|+|.+
T Consensus 89 ~~a~~~--l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~----------~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 89 EAAMEF--LQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP----------ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHH--HHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCC----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH--HHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 455555 66667777777766665544 4566777778999888332 235677889999999999987
No 338
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=22.09 E-value=2.8e+02 Score=25.87 Aligned_cols=62 Identities=8% Similarity=0.049 Sum_probs=42.0
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++....--+. +||+|+.+-... ..+.+.+...-+.|.+ ..+.|+++
T Consensus 66 ~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~-~~s~~~l~~~f~~ia~---a~~lPiil 131 (289)
T 2yxg_A 66 VNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYN-KPTQEGLRKHFGKVAE---SINLPIVL 131 (289)
T ss_dssp HTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS-CCCHHHHHHHHHHHHH---HCSSCEEE
T ss_pred hCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCCHHHHHHHHHHHHH---hcCCCEEE
Confidence 3557899998744 6666666655555 899999766542 2355777777766654 45789987
No 339
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=22.03 E-value=5e+02 Score=24.44 Aligned_cols=60 Identities=25% Similarity=0.255 Sum_probs=39.2
Q ss_pred hcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCC
Q psy259 136 KNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGA 214 (398)
Q Consensus 136 ~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~ 214 (398)
+.++.+++. +|+|.++-|+ | . .+++.+++.|.|++... .+ ..+...+...|+
T Consensus 93 ~~~~~~~~~g~d~V~l~~g~-----p-~-------~~~~~l~~~g~~v~~~v-----------~s---~~~a~~a~~~Ga 145 (326)
T 3bo9_A 93 DLVKVCIEEKVPVVTFGAGN-----P-T-------KYIRELKENGTKVIPVV-----------AS---DSLARMVERAGA 145 (326)
T ss_dssp HHHHHHHHTTCSEEEEESSC-----C-H-------HHHHHHHHTTCEEEEEE-----------SS---HHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEECCCC-----c-H-------HHHHHHHHcCCcEEEEc-----------CC---HHHHHHHHHcCC
Confidence 344444444 8999987553 4 2 24566778899998731 22 234566778899
Q ss_pred cEEEecCc
Q psy259 215 DCVMLSGE 222 (398)
Q Consensus 215 D~vmLS~E 222 (398)
|+|.++|=
T Consensus 146 D~i~v~g~ 153 (326)
T 3bo9_A 146 DAVIAEGM 153 (326)
T ss_dssp SCEEEECT
T ss_pred CEEEEECC
Confidence 99999763
No 340
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=22.01 E-value=2.4e+02 Score=26.56 Aligned_cols=66 Identities=14% Similarity=0.042 Sum_probs=42.2
Q ss_pred hhcCCcccEEEee---cChHHHhcHHHHHHh-cCeeEEcCCCC-CCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 117 GEQGKHIKIIAKI---ENHQGVKNLDEIIAE-ADGIMVARGDL-GIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 117 ~~~~~~~~iiaKI---E~~~~v~n~deIl~~-sDgimvaRgDL-g~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
+..+.++.||+-+ -+.++++....--+. +|++|+-.-.. ......+.+...-+.|.+ ..+.|+++-
T Consensus 78 ~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~---a~~lPiilY 148 (307)
T 3s5o_A 78 QAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVAD---LSPIPVVLY 148 (307)
T ss_dssp HTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred HHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHh---hcCCCEEEE
Confidence 3345678899876 445566555555455 89999864433 223456777777777744 457999873
No 341
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=21.98 E-value=64 Score=31.31 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=33.6
Q ss_pred HHHHHHh-cCeeEEcCCCCCC-CCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhc
Q psy259 138 LDEIIAE-ADGIMVARGDLGI-EIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIK 194 (398)
Q Consensus 138 ~deIl~~-sDgimvaRgDLg~-e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~ 194 (398)
++.+++. .+||.+. | +|. .+| ......++++.+.|+||+.+||-.+-.+.
T Consensus 232 l~~~~~~g~~GiVle-~-~G~Gn~p-----~~~~~~l~~a~~~gi~VV~~Sr~~~G~v~ 283 (330)
T 1wsa_A 232 VNAALQAGAKGIIHA-G-MGNGNPF-----PLTQNALEKAAKSGVVVARSSRVGSGSTT 283 (330)
T ss_dssp HHHHHHTTCSEEEEE-E-BTTTBCC-----HHHHHHHHHHHHTTCEEEEEESSSSSCBC
T ss_pred HHHHHhCCCCEEEEe-e-ECCCCCC-----HHHHHHHHHHHHCCCEEEEECCCCCCCcC
Confidence 5666665 8999997 1 121 223 23344566778899999999998776554
No 342
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=21.98 E-value=1.1e+02 Score=29.11 Aligned_cols=84 Identities=18% Similarity=0.202 Sum_probs=53.4
Q ss_pred HhcHHHHHHh--cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIAE--ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~~--sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++. .|.|+|+= |... ...++.+|-++||+|+| ++| ..|.+|...+..+..
T Consensus 54 ~~~~~~ll~~~~~D~V~i~t-------p~~~----h~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a~ 113 (349)
T 3i23_A 54 TADLNELLTDPEIELITICT-------PAHT----HYDLAKQAILAGKSVIV---------EKPFCDTLEHAEELFALGQ 113 (349)
T ss_dssp ESCTHHHHSCTTCCEEEECS-------CGGG----HHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEeC-------CcHH----HHHHHHHHHHcCCEEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 3578899886 89999982 3322 24566788899999998 777 567888888777765
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
..==.+|. +..- --.| .++.+.+++.+
T Consensus 114 ~~g~~~~v-~~~~-r~~p--~~~~~~~~i~~ 140 (349)
T 3i23_A 114 EKGVVVMP-YQNR-RFDG--DYLAMKQVVEQ 140 (349)
T ss_dssp HTTCCEEE-CCGG-GGCH--HHHHHHHHHHH
T ss_pred HcCCeEEE-Eecc-cCCH--HHHHHHHHHhc
Confidence 53212232 2211 1123 56667776654
No 343
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=21.98 E-value=63 Score=31.34 Aligned_cols=50 Identities=12% Similarity=0.349 Sum_probs=33.7
Q ss_pred HHHHHHh-cCeeEEcCCCCCC-CCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhc
Q psy259 138 LDEIIAE-ADGIMVARGDLGI-EIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIK 194 (398)
Q Consensus 138 ~deIl~~-sDgimvaRgDLg~-e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~ 194 (398)
++.+++. .+||.++ | +|. .+| ......++++.+.|+||+.+||-.+-.+.
T Consensus 235 l~~~~~~g~~GiVle-~-~G~Gn~p-----~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~ 286 (332)
T 2wlt_A 235 FQASLNSHAKGVVIA-G-VGNGNVS-----AGFLKAMQEASQMGVVIVRSSRVGSGGVT 286 (332)
T ss_dssp HHHHHHTTCSEEEEE-E-BTTTBCC-----HHHHHHHHHHHHTTCEEEEEESSSSSCCC
T ss_pred HHHHHhCCCCEEEEe-e-ECCCCCC-----HHHHHHHHHHHHCCCEEEEECCCCCCCcC
Confidence 5667665 8999997 1 221 223 23344566777899999999998776554
No 344
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=21.94 E-value=3.2e+02 Score=25.66 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=44.0
Q ss_pred cccEEEeecChHHHhcHHHHHHh-cCeeEE-cCCCCCCCCC---hhhHHHHHHHHHHHHH-HcCCCEEEeehhhHHhhcC
Q psy259 122 HIKIIAKIENHQGVKNLDEIIAE-ADGIMV-ARGDLGIEIP---PWKVFLAQKQMIAKCN-KVGKPVICATQMLESMIKK 195 (398)
Q Consensus 122 ~~~iiaKIE~~~~v~n~deIl~~-sDgimv-aRgDLg~e~~---~~~v~~~qk~ii~~c~-~~gkpvi~ATQmLeSMi~~ 195 (398)
.++++.++-+.+... ...+. +|+|.+ +++ -|-..+ ...+ ..+...+ ....||+.+--+
T Consensus 118 gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~~-~GG~~G~~~~~~~-----~~l~~v~~~~~iPviaaGGI------- 181 (328)
T 2gjl_A 118 GVKVIHKCTAVRHAL---KAERLGVDAVSIDGFE-CAGHPGEDDIPGL-----VLLPAAANRLRVPIIASGGF------- 181 (328)
T ss_dssp TCEEEEEESSHHHHH---HHHHTTCSEEEEECTT-CSBCCCSSCCCHH-----HHHHHHHTTCCSCEEEESSC-------
T ss_pred CCCEEeeCCCHHHHH---HHHHcCCCEEEEECCC-CCcCCCCccccHH-----HHHHHHHHhcCCCEEEECCC-------
Confidence 578888887654332 22222 899999 431 111111 1111 1222222 347999986322
Q ss_pred CCCCchhhhhHHHHHHhCCcEEEec
Q psy259 196 PRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 196 ~~PtraEvsDVanav~dG~D~vmLS 220 (398)
-+ -.|++.++..|+|+|+++
T Consensus 182 --~~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 182 --AD---GRGLVAALALGADAINMG 201 (328)
T ss_dssp --CS---HHHHHHHHHHTCSEEEES
T ss_pred --CC---HHHHHHHHHcCCCEEEEC
Confidence 11 247888888999999995
No 345
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=21.91 E-value=1.2e+02 Score=28.43 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=45.6
Q ss_pred hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHHhCCcEEEecCc
Q psy259 144 EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVLDGADCVMLSGE 222 (398)
Q Consensus 144 ~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~dG~D~vmLS~E 222 (398)
..|.|+|+ .|.. ....++.+|-++||+|+| ++| ..|.+|+..+..+... ...+...+.
T Consensus 72 ~vD~V~I~-------tP~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~-~g~~~~v~~ 130 (312)
T 3o9z_A 72 GVDYLSIA-------SPNH----LHYPQIRMALRLGANALS---------EKPLVLWPEEIARLKELEAR-TGRRVYTVL 130 (312)
T ss_dssp CCSEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSSSCSCHHHHHHHHHHHHH-HCCCEEECC
T ss_pred CCcEEEEC-------CCch----hhHHHHHHHHHCCCeEEE---------ECCCCCCHHHHHHHHHHHHH-cCCEEEEEe
Confidence 37999987 2332 235677888899999998 777 4677777777666543 233333333
Q ss_pred cCCCCChHHHHHHHHHHHHH
Q psy259 223 TAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 223 TA~G~yP~eaV~~m~~I~~~ 242 (398)
.-. -+| +++.+.+++.+
T Consensus 131 ~~R-~~p--~~~~~k~~i~~ 147 (312)
T 3o9z_A 131 QLR-VHP--SLLALKERLGQ 147 (312)
T ss_dssp GGG-GCH--HHHHHHHHHHT
T ss_pred ehh-cCH--HHHHHHHHHHc
Confidence 221 223 56666666654
No 346
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.84 E-value=4e+02 Score=23.17 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=40.2
Q ss_pred HHHHhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 276 EAASKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 276 ~~A~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
+...+...+.||+-- .+|.. ++.+-+..|.+|||++|...... ..-.+-.|+.-++.++.
T Consensus 61 ~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 61 DRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPF 126 (250)
T ss_dssp HHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSC
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCC
Confidence 334445677777643 34543 45666667899999999876543 33457789999888753
No 347
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=21.83 E-value=2.1e+02 Score=27.57 Aligned_cols=29 Identities=14% Similarity=0.054 Sum_probs=19.2
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
+.|||.. ...-|. .|+..++. |+|+||+.
T Consensus 197 ~iPVian---------GgI~s~---eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 197 QLTFVTN---------GGIRSL---EEALFHLK-RVDGVMLG 225 (350)
T ss_dssp TSEEEEE---------SSCCSH---HHHHHHHT-TSSEEEEC
T ss_pred CCeEEEE---------CCcCCH---HHHHHHHh-CCCEEEEC
Confidence 7899974 333343 35555554 99999995
No 348
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.81 E-value=2.8e+02 Score=21.35 Aligned_cols=61 Identities=13% Similarity=0.165 Sum_probs=36.9
Q ss_pred HHHHHhcCCcEEEEEC----CCchH-HHHHHhhCCCCCEEEEeCChhhhhhccc-c-ccceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLT----TTGTS-ARLISKYRPRCPIISVTRFPQVARQLHL-H-RSIIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T----~SG~t-A~~iSkyRP~~PIIAVT~n~~taRqL~L-~-wGV~Pvl~~~~ 335 (398)
.........+.|++-. .+|.. .+.+.+..|.+|||.+|........... . -|+.-++.++.
T Consensus 37 ~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~KP~ 104 (139)
T 2jk1_A 37 IAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLTKPW 104 (139)
T ss_dssp HHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhccCCC
Confidence 3333445567666542 34543 4566666799999999987654333332 2 35888887653
No 349
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=21.71 E-value=65 Score=31.20 Aligned_cols=51 Identities=20% Similarity=0.241 Sum_probs=33.2
Q ss_pred HHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhc
Q psy259 138 LDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIK 194 (398)
Q Consensus 138 ~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~ 194 (398)
++.+++. .+||.++=--.| .+| ......++++.+.|+||+.+||-.+-.+.
T Consensus 234 l~~~~~~g~~GiVle~~G~G-n~p-----~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~ 285 (327)
T 1o7j_A 234 YDAAIQHGVKGIVYAGMGAG-SVS-----VRGIAGMRKALEKGVVVMRSTRTGNGIVP 285 (327)
T ss_dssp HHHHHHTTCSEEEEEEBTTT-BCC-----HHHHHHHHHHHHTTCEEEEEESSSBSCBC
T ss_pred HHHHHhCCCCEEEEeeECCC-CCC-----HHHHHHHHHHHHCCceEEEECCCCCCCcC
Confidence 5666665 899998711111 223 23344566777899999999998776553
No 350
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=21.47 E-value=4.9e+02 Score=24.11 Aligned_cols=102 Identities=17% Similarity=0.173 Sum_probs=54.5
Q ss_pred HHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH-
Q psy259 133 QGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA- 207 (398)
Q Consensus 133 ~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa- 207 (398)
++++.+ +-.++. +||+++. |=-| ..+..++-...-+..++.++ -..|||+- -...+-.|+-+.+
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~ 90 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAG---------TGANSTREAIELTK 90 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHH
Confidence 444433 444444 8999886 4222 12223333333333333333 23688873 3344445554444
Q ss_pred HHHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHHh
Q psy259 208 NAVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAEA 245 (398)
Q Consensus 208 nav~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE~ 245 (398)
.|-..|+|++|+..=--..--+-+.++....|+..+.-
T Consensus 91 ~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~l 128 (291)
T 3tak_A 91 AAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVEL 128 (291)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 45556999999974433322345677777777776643
No 351
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=21.46 E-value=50 Score=31.96 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=25.8
Q ss_pred CCcEEEEECCCchHHHH-----HHhhCCCCCEEEEeCCh
Q psy259 282 FAGAIVVLTTTGTSARL-----ISKYRPRCPIISVTRFP 315 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~-----iSkyRP~~PIIAVT~n~ 315 (398)
.-+.+|++|.||.|+.. .+|-+ .+++|++|+++
T Consensus 82 ~~dlvI~iS~SG~T~e~l~a~~~ak~~-ga~~iaIT~~~ 119 (352)
T 3g68_A 82 ENTLVVGVSQGGSSYSTYNAMKLAEDK-GCKIASMAGCK 119 (352)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 35688999999999754 44555 79999999865
No 352
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=21.45 E-value=1.8e+02 Score=22.48 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=28.0
Q ss_pred HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 296 ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 296 A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
.+.+.+..|.+|||.+|...... ..-.+-.|+.-++.++
T Consensus 71 ~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP 110 (136)
T 3kto_A 71 LETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKP 110 (136)
T ss_dssp HHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred HHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCC
Confidence 45566667999999999876542 3334677898888775
No 353
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=21.36 E-value=1.6e+02 Score=27.43 Aligned_cols=84 Identities=20% Similarity=0.394 Sum_probs=51.7
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+ .|.... ..++..|-++||+|+| ++| ..+.+|...+..+..
T Consensus 52 ~~~~~~~l~~~~~D~V~i~-------tp~~~h----~~~~~~al~~gk~v~~---------EKP~~~~~~~~~~l~~~a~ 111 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVIC-------TPTDTH----ADLIERFARAGKAIFC---------EKPIDLDAERVRACLKVVS 111 (331)
T ss_dssp ECCHHHHHHCTTCCEEEEC-------SCGGGH----HHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEe-------CCchhH----HHHHHHHHHcCCcEEE---------ecCCCCCHHHHHHHHHHHH
Confidence 357889998 68999997 233322 3455678889999997 666 567777777777665
Q ss_pred hCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 212 DGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 212 dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
.- ..+...+..- --+| .++.+.+++.+
T Consensus 112 ~~-g~~~~v~~~~-r~~p--~~~~~~~~i~~ 138 (331)
T 4hkt_A 112 DT-KAKLMVGFNR-RFDP--HFMAVRKAIDD 138 (331)
T ss_dssp HT-TCCEEECCGG-GGCH--HHHHHHHHHHT
T ss_pred Hc-CCeEEEcccc-cCCH--HHHHHHHHHHc
Confidence 43 2222222221 1123 56666666653
No 354
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=21.35 E-value=51 Score=28.31 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=25.7
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||+|...+ +|-| .+++|++|.++.
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~~-g~~vI~IT~~~~ 147 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVTR-DMTIVALTGYDG 147 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 457899999999987543 3444 699999999753
No 355
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=21.33 E-value=2.9e+02 Score=26.44 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=42.2
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++....--+. +||+|+.+-.+. ..+.+.+...-+.|.+ ..+.|+++
T Consensus 100 ~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~-~~s~~~l~~~f~~VA~---a~~lPiil 165 (332)
T 2r8w_A 100 LRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYT-PLTQEEAYHHFAAVAG---ATALPLAI 165 (332)
T ss_dssp HTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSS-CCCHHHHHHHHHHHHH---HCSSCEEE
T ss_pred hCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCCHHHHHHHHHHHHH---hcCCCEEE
Confidence 3557899987744 6677666655555 899999866542 2355777777766654 45789987
No 356
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.25 E-value=3.5e+02 Score=23.75 Aligned_cols=60 Identities=17% Similarity=0.101 Sum_probs=38.5
Q ss_pred HHHHHhcCCcEEEEECC----CchH-HHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLTT----TGTS-ARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T~----SG~t-A~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
.+.......+.||+--. +|.. ++.+.+ .|.+|||++|...... ..-.+-.|+.-++.++.
T Consensus 74 l~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~-~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~ 139 (249)
T 3q9s_A 74 LIKAREDHPDLILLDLGLPDFDGGDVVQRLRK-NSALPIIVLTARDTVEEKVRLLGLGADDYLIKPF 139 (249)
T ss_dssp HHHHHHSCCSEEEEECCSCHHHHHHHHHHHHT-TCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSC
T ss_pred HHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHc-CCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCC
Confidence 34445556787776543 3333 344444 6899999999876543 33456779999888753
No 357
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=21.22 E-value=5e+02 Score=24.10 Aligned_cols=49 Identities=24% Similarity=0.430 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEecCccCCCCChHHHHHHHH
Q psy259 169 KQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLSGETAKGDYPVECVRAMH 237 (398)
Q Consensus 169 k~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS~ETA~G~yP~eaV~~m~ 237 (398)
+..++.|+++|++|.+-| . + +-.+....+..|+|+|+- +||-.+.+.+.
T Consensus 258 ~~~v~~~~~~Gl~V~~WT--V----n-------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~ 306 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWT--V----N-------EPEDIRRMATTGVDGIVT-------DYPGRTQRILI 306 (313)
T ss_dssp HHHHHHHHHTTCEEEEBC--C----C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEc--C----C-------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 578999999999999976 1 1 234677888889999996 79988776664
No 358
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=21.17 E-value=3e+02 Score=26.12 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=43.5
Q ss_pred hhcCCcccEEEeec---ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 117 GEQGKHIKIIAKIE---NHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 117 ~~~~~~~~iiaKIE---~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
+..+.++.||+-+= +.++++.....-+. +||+|+.+-... ....+.+...-+.|.+. .+.|+++-
T Consensus 87 ~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~-~~s~~~l~~~f~~va~a---~~lPiilY 155 (314)
T 3qze_A 87 DQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYN-KPTQEGMYQHFRHIAEA---VAIPQILY 155 (314)
T ss_dssp HHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS-CCCHHHHHHHHHHHHHH---SCSCEEEE
T ss_pred HHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHh---cCCCEEEE
Confidence 33456789998764 46666666665555 899999865443 23456777776666554 48999973
No 359
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=20.98 E-value=69 Score=31.01 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=34.0
Q ss_pred cHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhc
Q psy259 137 NLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIK 194 (398)
Q Consensus 137 n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~ 194 (398)
-++.+++. .+||.++=--.| .+| ......++++.+.|+||+.+||-.+-.+.
T Consensus 227 ~l~~~~~~g~~GiVl~~~G~G-n~p-----~~~~~~l~~a~~~gi~VV~~Sr~~~G~v~ 279 (326)
T 1nns_A 227 PAKALVDAGYDGIVSAGVGNG-NLY-----KSVFDTLATAAKTGTAVVRSSRVPTGATT 279 (326)
T ss_dssp HHHHHHHTTCSEEEEEEBTTT-BCC-----HHHHHHHHHHHHTTCEEEEEESSSSSCBC
T ss_pred HHHHHHhCCCCEEEEeeECCC-CCC-----HHHHHHHHHHHHCCCEEEEECCCCCCCcC
Confidence 35667765 899999721111 223 23344566778899999999998776553
No 360
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.97 E-value=53 Score=29.36 Aligned_cols=35 Identities=14% Similarity=0.386 Sum_probs=26.2
Q ss_pred CCcEEEEECCCchHHHHH-----Hhh-CCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKY-RPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----Sky-RP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||.|...+ +|- +-.++||++|.++.
T Consensus 106 ~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~ 146 (220)
T 3etn_A 106 ENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPD 146 (220)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 447899999999987543 343 25799999998653
No 361
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=20.92 E-value=36 Score=33.31 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=28.1
Q ss_pred CCcEEEEECCCchHHHHHH-----hhC-CCCCEEEEeCCh--hhhhhc
Q psy259 282 FAGAIVVLTTTGTSARLIS-----KYR-PRCPIISVTRFP--QVARQL 321 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~iS-----kyR-P~~PIIAVT~n~--~taRqL 321 (398)
.-+.+|++|.||.|+..+. |-+ +.+++|++|.++ .++|..
T Consensus 103 ~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La~~a 150 (384)
T 3c3j_A 103 HPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNA 150 (384)
T ss_dssp SCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHHH
T ss_pred CCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHhhh
Confidence 3468899999999876543 333 579999999865 344443
No 362
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.90 E-value=2.7e+02 Score=21.31 Aligned_cols=57 Identities=7% Similarity=-0.008 Sum_probs=35.3
Q ss_pred HHHhcCCcEEEEECCCchH-HHHHHhhCC-CCCEEEEeCChhhh-hhccccccceEEecCC
Q psy259 277 AASKVFAGAIVVLTTTGTS-ARLISKYRP-RCPIISVTRFPQVA-RQLHLHRSIIPLVYEE 334 (398)
Q Consensus 277 ~A~~~~A~aIIv~T~SG~t-A~~iSkyRP-~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~ 334 (398)
...+...+.||....+|.. .+.+-+. | .+|||.+|...... ..-.+-.|+.-++.++
T Consensus 57 ~l~~~~~dlvi~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP 116 (137)
T 2pln_A 57 LMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKP 116 (137)
T ss_dssp HHHHSCCSEEEECSTTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred HHHcCCCCEEEEcCccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCC
Confidence 3344567877722234543 3455555 8 99999999876433 2334567888888764
No 363
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=20.88 E-value=1.3e+02 Score=28.17 Aligned_cols=58 Identities=26% Similarity=0.517 Sum_probs=40.7
Q ss_pred HhcHHHHHH--hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCC-CCCchhhhhHHHHHH
Q psy259 135 VKNLDEIIA--EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKP-RATRAEISDVANAVL 211 (398)
Q Consensus 135 v~n~deIl~--~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~-~PtraEvsDVanav~ 211 (398)
..+++++++ ..|.|+|+= |... ...++..|-++||+|+| ++| ..+.+|...+..+..
T Consensus 54 ~~~~~~~l~~~~~D~V~i~t-------p~~~----h~~~~~~al~~gk~v~~---------EKP~~~~~~~~~~l~~~a~ 113 (344)
T 3euw_A 54 VASPDEVFARDDIDGIVIGS-------PTST----HVDLITRAVERGIPALC---------EKPIDLDIEMVRACKEKIG 113 (344)
T ss_dssp ESSHHHHTTCSCCCEEEECS-------CGGG----HHHHHHHHHHTTCCEEE---------CSCSCSCHHHHHHHHHHHG
T ss_pred eCCHHHHhcCCCCCEEEEeC-------Cchh----hHHHHHHHHHcCCcEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 367889988 689999972 3332 23455678899999998 666 566777777766654
Q ss_pred h
Q psy259 212 D 212 (398)
Q Consensus 212 d 212 (398)
.
T Consensus 114 ~ 114 (344)
T 3euw_A 114 D 114 (344)
T ss_dssp G
T ss_pred h
Confidence 3
No 364
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=20.80 E-value=1.9e+02 Score=26.66 Aligned_cols=72 Identities=13% Similarity=0.287 Sum_probs=45.6
Q ss_pred cccHHHHHHHHHHhhchhcCCcccEEEeecChH-HHhcHHHHHH---hcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHH
Q psy259 101 NLYESNVRLIEKLMATGEQGKHIKIIAKIENHQ-GVKNLDEIIA---EADGIMVARGDLGIEIPPWKVFLAQKQMIAKCN 176 (398)
Q Consensus 101 ~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~-~v~n~deIl~---~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~ 176 (398)
-.|..-+..+++. +.+.|-++.+..-=.+.+ -.+.++.+++ -.|||++.. +- . ....+++++.
T Consensus 17 ~f~~~~~~g~~~~--a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~------~----~~~~~~~~~~ 83 (350)
T 3h75_A 17 TFWVSYSQFMQAA--ARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQ------Y----VAPQILRLSQ 83 (350)
T ss_dssp HHHHHHHHHHHHH--HHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CS------S----HHHHHHHHHT
T ss_pred hHHHHHHHHHHHH--HHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-ch------h----hHHHHHHHHH
Confidence 3444445566666 666776666553222222 2567888888 589999974 21 1 2234677888
Q ss_pred HcCCCEEEe
Q psy259 177 KVGKPVICA 185 (398)
Q Consensus 177 ~~gkpvi~A 185 (398)
+.|.||++.
T Consensus 84 ~~giPvV~~ 92 (350)
T 3h75_A 84 GSGIKLFIV 92 (350)
T ss_dssp TSCCEEEEE
T ss_pred hCCCcEEEE
Confidence 999999984
No 365
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=20.71 E-value=3.4e+02 Score=24.87 Aligned_cols=60 Identities=22% Similarity=0.222 Sum_probs=39.6
Q ss_pred HHHHHHhcCCcEEEEE-----CCCchHH-HHHHhhCCCCCEEEEeCChhhhhhccccccceEEecCCC
Q psy259 274 AVEAASKVFAGAIVVL-----TTTGTSA-RLISKYRPRCPIISVTRFPQVARQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 274 av~~A~~~~A~aIIv~-----T~SG~tA-~~iSkyRP~~PIIAVT~n~~taRqL~L~wGV~Pvl~~~~ 335 (398)
|.+...+...+.|++= --+|..+ +.+-+. +.+|||++|.+... +.-.+--|+.-++.++.
T Consensus 197 Al~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~-~~~piI~lT~~~~~-~~~~~~~G~~~~l~KP~ 262 (286)
T 3n0r_A 197 ALEAVTRRTPGLVLADIQLADGSSGIDAVKDILGR-MDVPVIFITAFPER-LLTGERPEPTFLITKPF 262 (286)
T ss_dssp HHHHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHH-TTCCEEEEESCGGG-GCCSSSCCCSSEEESSC
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhc-CCCCEEEEeCCHHH-HHHHHhCCCcEEEeCCC
Confidence 4445556677877663 3467654 444333 39999999998764 33366779988888753
No 366
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.66 E-value=2.1e+02 Score=22.52 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=38.8
Q ss_pred HHHHHhcCCcEEEEEC----CCch-HHHHHHhhCCCCCEEEEeCChhhh-hhccccccceEEecCCC
Q psy259 275 VEAASKVFAGAIVVLT----TTGT-SARLISKYRPRCPIISVTRFPQVA-RQLHLHRSIIPLVYEEP 335 (398)
Q Consensus 275 v~~A~~~~A~aIIv~T----~SG~-tA~~iSkyRP~~PIIAVT~n~~ta-RqL~L~wGV~Pvl~~~~ 335 (398)
.+...+...+.||+-. .+|. ..+.+.+..|.+|||++|...... ..-.+-.|+.-++..+.
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~ 110 (153)
T 3cz5_A 44 YRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSS 110 (153)
T ss_dssp HHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTS
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCC
Confidence 3444455677777632 2343 356666778999999999875432 23345678888887653
No 367
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=20.64 E-value=3.6e+02 Score=25.07 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=48.8
Q ss_pred hHHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 132 HQGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 132 ~~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
.++++++ +-.++. +|||++. |=-| ..+..++-..+-+..++.++ -..|||+- -...+-.|+-+.+
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pvi~G---------vg~~~t~~ai~la 89 (291)
T 3a5f_A 21 FDKLSELIEWHIKSKTDAIIVC-GTTGEATTMTETERKETIKFVIDKVN-KRIPVIAG---------TGSNNTAASIAMS 89 (291)
T ss_dssp HHHHHHHHHHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCcccHHHHHHHH
Confidence 3444433 444455 8999986 3211 12233333333333333332 24788873 3344445555544
Q ss_pred H-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 208 N-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 208 n-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
. |-..|+|++|+..=--..-=+-+.++....|+.
T Consensus 90 ~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~ 124 (291)
T 3a5f_A 90 KWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSD 124 (291)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGG
T ss_pred HHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH
Confidence 4 445699999997433222223344445555544
No 368
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=20.62 E-value=2.9e+02 Score=24.48 Aligned_cols=72 Identities=19% Similarity=0.338 Sum_probs=41.3
Q ss_pred CcccHHHHHHHHHHhhchhcCCcccEEEeecChHH-HhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy259 100 PNLYESNVRLIEKLMATGEQGKHIKIIAKIENHQG-VKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNK 177 (398)
Q Consensus 100 ~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~~-v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~ 177 (398)
+-.|..=+..+.+. +.+.|.++.+..-=++.+. .+.++.+++- .|||++...+. +. ..++.+.+
T Consensus 28 ~~~~~~~~~gi~~~--a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----~~--------~~~~~l~~ 93 (289)
T 2fep_A 28 SIFYSELARGIEDI--ATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNI----TD--------EHVAEFKR 93 (289)
T ss_dssp SHHHHHHHHHHHHH--HHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCC----CH--------HHHHHHHH
T ss_pred CchHHHHHHHHHHH--HHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCC----CH--------HHHHHHHh
Confidence 33443334566666 6667776655432223322 3345555544 89999986543 21 13455667
Q ss_pred cCCCEEEe
Q psy259 178 VGKPVICA 185 (398)
Q Consensus 178 ~gkpvi~A 185 (398)
.|.|+++.
T Consensus 94 ~~iPvV~~ 101 (289)
T 2fep_A 94 SPVPIVLA 101 (289)
T ss_dssp SSSCEEEE
T ss_pred cCCCEEEE
Confidence 89999974
No 369
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=20.62 E-value=3.2e+02 Score=25.69 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHhcccccccCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhchhcCCcccEEEeecC-hHHHhcHHHH
Q psy259 63 VAVDMLEKIIETESNSDECSEKPRECPSEPEPPHCKEPNLYESNVRLIEKLMATGEQGKHIKIIAKIEN-HQGVKNLDEI 141 (398)
Q Consensus 63 ~~~e~l~~~i~~Gmnvr~~~~~~~pgp~~~~~~k~~~~~~~vddV~~ir~~~~l~~~~~~~~iiaKIE~-~~~v~n~deI 141 (398)
..++.++.|.++|...-+... | .. . =+|-..+|.+ .. ..+++.+.+-.-+ ..++ +..
T Consensus 28 ~K~~i~~~L~~~Gv~~IE~g~---p----~~----~-----~~d~e~v~~i--~~-~~~~~~i~~l~~~~~~di---~~a 85 (293)
T 3ewb_X 28 EKIQIALQLEKLGIDVIEAGF---P----IS----S-----PGDFECVKAI--AK-AIKHCSVTGLARCVEGDI---DRA 85 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC---G----GG----C-----HHHHHHHHHH--HH-HCCSSEEEEEEESSHHHH---HHH
T ss_pred HHHHHHHHHHHcCCCEEEEeC---C----CC----C-----ccHHHHHHHH--HH-hcCCCEEEEEecCCHHHH---HHH
Confidence 445567778888855433111 0 00 0 0244555554 22 2345566555533 2333 333
Q ss_pred HHh-----cCe--eEEcCCCCC----CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHH-
Q psy259 142 IAE-----ADG--IMVARGDLG----IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANA- 209 (398)
Q Consensus 142 l~~-----sDg--imvaRgDLg----~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVana- 209 (398)
++. .|. ++++=.|+- +....+++....+.+++.|++.|..|.+... ..++-+...+-+++.+
T Consensus 86 ~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~ 159 (293)
T 3ewb_X 86 EEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTA 159 (293)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHH
T ss_pred HHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHH
Confidence 332 232 344444432 2445677777888999999999999987532 1223333445566664
Q ss_pred HHhCCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 210 VLDGADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 210 v~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
...|+|.|-|. +|.=...|.+.-+.+..+.+.
T Consensus 160 ~~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 160 IDAGATVINIP-DTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp HHTTCCEEEEE-CSSSCCCHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEec-CCCCCCCHHHHHHHHHHHHHh
Confidence 45789999996 788788898877777766543
No 370
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=20.62 E-value=4.5e+02 Score=23.38 Aligned_cols=60 Identities=18% Similarity=0.173 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCCEEEeeh-------------hhHHhhcC-CCCCchh-----hhhHHHHHHhCCcEEEecCccCCCCCh
Q psy259 170 QMIAKCNKVGKPVICATQ-------------MLESMIKK-PRATRAE-----ISDVANAVLDGADCVMLSGETAKGDYP 229 (398)
Q Consensus 170 ~ii~~c~~~gkpvi~ATQ-------------mLeSMi~~-~~PtraE-----vsDVanav~dG~D~vmLS~ETA~G~yP 229 (398)
+.++.+.+.|.-.|+.|. ++..+... ..|--|+ ..|+..+...|+|+|++..---.+.++
T Consensus 160 e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~ 238 (266)
T 2w6r_A 160 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREID 238 (266)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-----
T ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCC
Confidence 344556667766666543 23333321 3454443 267888877899999996544444433
No 371
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=20.58 E-value=5.2e+02 Score=24.08 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=54.4
Q ss_pred hHHHhcH-HHHHHh-cCeeEEcCCCCC--CCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 132 HQGVKNL-DEIIAE-ADGIMVARGDLG--IEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 132 ~~~v~n~-deIl~~-sDgimvaRgDLg--~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
.++++++ +-.++. +|||++. |=-| ..+..++-..+-+..++.++. ..|||+- -...+-.|+-+.+
T Consensus 20 ~~~l~~lv~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~~~t~~ai~la 88 (297)
T 2rfg_A 20 EKALAGLVDWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAG---------AGSNNPVEAVRYA 88 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEE---------CCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEc---------cCCCCHHHHHHHH
Confidence 3455443 444555 8999986 4211 122233323333333333322 4788863 3344445665555
Q ss_pred H-HHHhCCcEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 208 N-AVLDGADCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 208 n-av~dG~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
. |-..|+|++|+..=--..-=+-+.++....|+..+.
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 89 QHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp HHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4 445699999997543322234556677777776554
No 372
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=20.57 E-value=2.9e+02 Score=26.47 Aligned_cols=92 Identities=13% Similarity=0.150 Sum_probs=0.0
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHHHhcHHHHHHhcCeeEE-cC------CCCCCCCChhhHHHH-HHHHHHHHHHc
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQGVKNLDEIIAEADGIMV-AR------GDLGIEIPPWKVFLA-QKQMIAKCNKV 178 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~v~n~deIl~~sDgimv-aR------gDLg~e~~~~~v~~~-qk~ii~~c~~~ 178 (398)
++.+|+. +++++.++-+.+-.....+ .-+|+|.+ ++ |......+....+.. ...+-+.....
T Consensus 138 i~~~~~~--------g~~v~~~v~t~~~a~~a~~--~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~ 207 (369)
T 3bw2_A 138 IARLRRA--------GTLTLVTATTPEEARAVEA--AGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV 207 (369)
T ss_dssp HHHHHHT--------TCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHC--------CCeEEEECCCHHHHHHHHH--cCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc
Q ss_pred CCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCcEEEec
Q psy259 179 GKPVICATQMLESMIKKPRATRAEISDVANAVLDGADCVMLS 220 (398)
Q Consensus 179 gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D~vmLS 220 (398)
..|||. ....-+.. |+..++..|+|+|+++
T Consensus 208 ~iPVia---------aGGI~~~~---~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 208 DIPVVA---------AGGIMRGG---QIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCEEE---------ESSCCSHH---HHHHHHHTTCSEEEES
T ss_pred CceEEE---------ECCCCCHH---HHHHHHHcCCCEEEEC
No 373
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=20.50 E-value=50 Score=31.69 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=27.6
Q ss_pred cEEEEECCCchHHHHH-----HhhCCCCCEEEEeCCh--hhhhhcc
Q psy259 284 GAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFP--QVARQLH 322 (398)
Q Consensus 284 ~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~--~taRqL~ 322 (398)
+.+|++|.||.|+..+ +|-+ .+++|++|.++ ..++...
T Consensus 102 dlvI~iS~SG~T~e~l~a~~~ak~~-Ga~vIaIT~~~~S~La~~ad 146 (342)
T 1j5x_A 102 GLAFLFSRTGNTTEVLLANDVLKKR-NHRTIGITIEEESRLAKESD 146 (342)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHT-TEEEEEEESCTTSHHHHHSS
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHhcC
Confidence 6889999999987554 3444 78999999865 3455443
No 374
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=20.42 E-value=50 Score=32.23 Aligned_cols=40 Identities=13% Similarity=0.050 Sum_probs=28.9
Q ss_pred cCCcEEEEECCCchHHHH-----HHhhCCCCCEEEEeCCh--hhhhhc
Q psy259 281 VFAGAIVVLTTTGTSARL-----ISKYRPRCPIISVTRFP--QVARQL 321 (398)
Q Consensus 281 ~~A~aIIv~T~SG~tA~~-----iSkyRP~~PIIAVT~n~--~taRqL 321 (398)
..-+.+|++|.||.|+.. .+|-+ .+++|++|+++ ..+|..
T Consensus 96 ~~~dlvI~iS~SGeT~e~l~a~~~ak~~-Ga~~IaIT~~~~S~La~~a 142 (366)
T 3knz_A 96 SGKALVVGISQGGGSLSTLAAMERARNV-GHITASMAGVAPATIDRAA 142 (366)
T ss_dssp SCSEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESSSSCGGGGGC
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHc-CCCEEEEECCCCChhhhhc
Confidence 355788999999999754 44555 79999999865 334443
No 375
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=20.41 E-value=2.5e+02 Score=26.16 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=42.3
Q ss_pred hcCCcccEEEeec---ChHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEe
Q psy259 118 EQGKHIKIIAKIE---NHQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICA 185 (398)
Q Consensus 118 ~~~~~~~iiaKIE---~~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~A 185 (398)
..+.+++||+-+= +.++++....--+. +|++|+.+-.+. ..+.+.+...-+.|.+. .+.|+++-
T Consensus 66 ~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~-~~~~~~l~~~f~~ia~a---~~lPiilY 133 (291)
T 3tak_A 66 VANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN-KPTQEGLYQHYKAIAEA---VELPLILY 133 (291)
T ss_dssp HHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS-CCCHHHHHHHHHHHHHH---CCSCEEEE
T ss_pred HhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHh---cCCCEEEE
Confidence 3455789998764 45566655555455 899999866543 23456777766666554 48999973
No 376
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=20.37 E-value=53 Score=28.14 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=25.4
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCCh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFP 315 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~ 315 (398)
.-+.+|++|.||.|...+ +|-| .+|+|++|.++
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~-g~~vI~IT~~~ 153 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAK-GMTCVGFTGNR 153 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 457899999999886543 4444 69999999865
No 377
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=20.36 E-value=5.2e+02 Score=23.96 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=0.0
Q ss_pred ChHHHhcHHHHHHh--cCeeEE-cCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 131 NHQGVKNLDEIIAE--ADGIMV-ARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 131 ~~~~v~n~deIl~~--sDgimv-aRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
+.++++++=+-+-. +|||++ |---=+..+..++-..+-+..++.++. ..|||+ .-...+-+|+-+.+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvia---------Gvg~~~t~~ai~la 88 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIA---------GAGSNSTAEAIAFV 88 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEE---------ECCCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE---------ecCCccHHHHHHHH
Q ss_pred HHHHh-CCcEEEecCccCCCCChHHHHHHHHHHHHH
Q psy259 208 NAVLD-GADCVMLSGETAKGDYPVECVRAMHNTCKE 242 (398)
Q Consensus 208 nav~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~ 242 (398)
....+ |+|++|+..=--..-=+-+.++....|+..
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 124 (292)
T 2vc6_A 89 RHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAA 124 (292)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
No 378
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=20.36 E-value=1.7e+02 Score=25.89 Aligned_cols=72 Identities=19% Similarity=0.249 Sum_probs=40.4
Q ss_pred ccHHHHHHHHHHhhchhcCCcccEEEeecChH-HHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcC
Q psy259 102 LYESNVRLIEKLMATGEQGKHIKIIAKIENHQ-GVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVG 179 (398)
Q Consensus 102 ~~vddV~~ir~~~~l~~~~~~~~iiaKIE~~~-~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~g 179 (398)
.|..=+..+.+. +.+.|.++.+..--++.+ -.+.++.++.. .|||++...+. +.+ ...++++++.|
T Consensus 15 f~~~~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~------~~~----~~~~~~~~~~~ 82 (283)
T 2ioy_A 15 FFVTLKNGAEEK--AKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDS------DAV----VTAIKEANSKN 82 (283)
T ss_dssp HHHHHHHHHHHH--HHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSST------TTT----HHHHHHHHHTT
T ss_pred HHHHHHHHHHHH--HHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCch------hhh----HHHHHHHHHCC
Confidence 343334555555 666676665543222222 24456666655 89999975432 111 11345667889
Q ss_pred CCEEEe
Q psy259 180 KPVICA 185 (398)
Q Consensus 180 kpvi~A 185 (398)
.|+++.
T Consensus 83 iPvV~~ 88 (283)
T 2ioy_A 83 IPVITI 88 (283)
T ss_dssp CCEEEE
T ss_pred CeEEEe
Confidence 999874
No 379
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=20.27 E-value=4.1e+02 Score=25.09 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred ChHHHhcHHHHHHh--cCeeEE-cCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 131 NHQGVKNLDEIIAE--ADGIMV-ARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 131 ~~~~v~n~deIl~~--sDgimv-aRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
+.++++++=+-+-. +|||++ |---=+..+..++-..+-+..++.++. ..|||+ .-.. +-.|+-+.+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpVia---------Gvg~-st~~ai~la 99 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATVVA---------GIGY-SVDTAIELG 99 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEE---------EECS-SHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeEEe---------cCCc-CHHHHHHHH
Q ss_pred HHHHh-CCcEEEecCccCCCCChHHHHHHHHHHHHHHH
Q psy259 208 NAVLD-GADCVMLSGETAKGDYPVECVRAMHNTCKEAE 244 (398)
Q Consensus 208 nav~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~~aE 244 (398)
....+ |+|++|+..=--..--+-+.++....|+..+.
T Consensus 100 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 100 KSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp HHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred HHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
No 380
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.24 E-value=2.4e+02 Score=21.68 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=29.8
Q ss_pred cCCcEEEEECC----CchH-HHHHHhhCCCCCEEEEe-CChhhhhhccccccceEEecCC
Q psy259 281 VFAGAIVVLTT----TGTS-ARLISKYRPRCPIISVT-RFPQVARQLHLHRSIIPLVYEE 334 (398)
Q Consensus 281 ~~A~aIIv~T~----SG~t-A~~iSkyRP~~PIIAVT-~n~~taRqL~L~wGV~Pvl~~~ 334 (398)
...+.|++-.. +|.. .+.+-+..|.+|||.+| ....... .... +..++.++
T Consensus 59 ~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~-~~~~--~~~~l~KP 115 (138)
T 2b4a_A 59 STCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTGRHELIE-SSEH--NLSYLQKP 115 (138)
T ss_dssp GSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESCC--CCC-CSSS--CEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCCHHH-HHHH--HHheeeCC
Confidence 46677766432 3432 34555566899999999 7665544 3333 66666654
No 381
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=20.24 E-value=4.2e+02 Score=24.61 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=41.9
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++....--+. +||+|+.+-... ..+.+.+...-+.|.+ ..+.|+++
T Consensus 70 ~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~-~~~~~~l~~~f~~va~---a~~lPiil 135 (293)
T 1f6k_A 70 AKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYY-KFSFPEIKHYYDTIIA---ETGSNMIV 135 (293)
T ss_dssp HTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS-CCCHHHHHHHHHHHHH---HHCCCEEE
T ss_pred hCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCCHHHHHHHHHHHHH---hCCCCEEE
Confidence 4557899998744 6667666655555 899999766542 2245777777777655 44789987
No 382
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=20.23 E-value=39 Score=33.16 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=41.5
Q ss_pred hcHHHHHHhcCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHHHHHHhCCc
Q psy259 136 KNLDEIIAEADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVANAVLDGAD 215 (398)
Q Consensus 136 ~n~deIl~~sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVanav~dG~D 215 (398)
.+++++++-.|.+.|+ +|..--...--.+..+|-++||+|+| ++|. |..|+..+..+...-==
T Consensus 58 ~~~~~l~~~~D~v~i~-------~p~~~h~~~~~~~a~~al~aGkhVl~---------EKPl-~~~ea~~l~~~A~~~g~ 120 (372)
T 4gmf_A 58 TSPEQITGMPDIACIV-------VRSTVAGGAGTQLARHFLARGVHVIQ---------EHPL-HPDDISSLQTLAQEQGC 120 (372)
T ss_dssp SSGGGCCSCCSEEEEC-------CC--CTTSHHHHHHHHHHHTTCEEEE---------ESCC-CHHHHHHHHHHHHHHTC
T ss_pred CCHHHHhcCCCEEEEE-------CCCcccchhHHHHHHHHHHcCCcEEE---------ecCC-CHHHHHHHHHHHHHcCC
Confidence 3555666668998886 22211111113567788899999998 8996 88888777765543322
Q ss_pred EEEe
Q psy259 216 CVML 219 (398)
Q Consensus 216 ~vmL 219 (398)
.+|.
T Consensus 121 ~~~v 124 (372)
T 4gmf_A 121 CYWI 124 (372)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 3344
No 383
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=20.17 E-value=56 Score=28.19 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=25.6
Q ss_pred CCcEEEEECCCchHHHHH-----HhhCCCCCEEEEeCChh
Q psy259 282 FAGAIVVLTTTGTSARLI-----SKYRPRCPIISVTRFPQ 316 (398)
Q Consensus 282 ~A~aIIv~T~SG~tA~~i-----SkyRP~~PIIAVT~n~~ 316 (398)
.-+.+|++|.||+|...+ +|-| .+++|++|.++.
T Consensus 113 ~~DvvI~iS~SG~t~~~i~~~~~ak~~-g~~vI~IT~~~~ 151 (199)
T 1x92_A 113 PGDVLLAISTSGNSANVIQAIQAAHDR-EMLVVALTGRDG 151 (199)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 457899999999987543 3433 699999999753
No 384
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.12 E-value=3.2e+02 Score=25.46 Aligned_cols=62 Identities=23% Similarity=0.261 Sum_probs=41.2
Q ss_pred cCCcccEEEeecC---hHHHhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 119 QGKHIKIIAKIEN---HQGVKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 119 ~~~~~~iiaKIE~---~~~v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
.+.+++||+-+=. .++++....--+. +||+|+.+-... ..+.+.+...-+.|. ...+.|+++
T Consensus 66 ~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~-~~s~~~l~~~f~~va---~a~~lPiil 131 (294)
T 2ehh_A 66 AAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYN-KPTQRGLYEHFKTVA---QEVDIPIII 131 (294)
T ss_dssp HTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS-CCCHHHHHHHHHHHH---HHCCSCEEE
T ss_pred hCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC-CCCHHHHHHHHHHHH---HhcCCCEEE
Confidence 3557889987743 6666666655555 899999766542 225566666666664 455889987
No 385
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=20.03 E-value=2.7e+02 Score=24.27 Aligned_cols=65 Identities=9% Similarity=0.093 Sum_probs=39.0
Q ss_pred HHHHHHHhhchhcCCcccEEEeecChHH-HhcHHHHHHh-cCeeEEcCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q psy259 107 VRLIEKLMATGEQGKHIKIIAKIENHQG-VKNLDEIIAE-ADGIMVARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVIC 184 (398)
Q Consensus 107 V~~ir~~~~l~~~~~~~~iiaKIE~~~~-v~n~deIl~~-sDgimvaRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 184 (398)
+..+.+. +.+.|.++.+..-=++.+. .+.++.++.- .|||++...+. + + ..++.+.+.|.|+++
T Consensus 22 ~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~----~-~-------~~~~~l~~~~iPvV~ 87 (275)
T 3d8u_A 22 LPSFQQA--LNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEH----S-Q-------RTHQLLEASNTPVLE 87 (275)
T ss_dssp HHHHHHH--HHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCC----C-H-------HHHHHHHHHTCCEEE
T ss_pred HHHHHHH--HHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC----C-H-------HHHHHHHhCCCCEEE
Confidence 4555666 6667776666543233332 2345555544 89999986553 1 1 235566778999997
Q ss_pred e
Q psy259 185 A 185 (398)
Q Consensus 185 A 185 (398)
.
T Consensus 88 ~ 88 (275)
T 3d8u_A 88 I 88 (275)
T ss_dssp E
T ss_pred E
Confidence 4
No 386
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=20.00 E-value=5.8e+02 Score=24.41 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=0.0
Q ss_pred ChHHHhcHHHHHHh--cCeeEE-cCCCCCCCCChhhHHHHHHHHHHHHHHcCCCEEEeehhhHHhhcCCCCCchhhhhHH
Q psy259 131 NHQGVKNLDEIIAE--ADGIMV-ARGDLGIEIPPWKVFLAQKQMIAKCNKVGKPVICATQMLESMIKKPRATRAEISDVA 207 (398)
Q Consensus 131 ~~~~v~n~deIl~~--sDgimv-aRgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ATQmLeSMi~~~~PtraEvsDVa 207 (398)
+.++++++=+-+-. +|||++ |---=+..+..++-..+-+..++.++. ..|||+ .-...+-.|+-+.+
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpVia---------Gvg~~st~eai~la 119 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLI---------GTGGTNARETIELS 119 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEE---------ECCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEE---------ecCCCCHHHHHHHH
Q ss_pred HHHHh-CCcEEEecCccCCCCChHHHHHHHHHHHH
Q psy259 208 NAVLD-GADCVMLSGETAKGDYPVECVRAMHNTCK 241 (398)
Q Consensus 208 nav~d-G~D~vmLS~ETA~G~yP~eaV~~m~~I~~ 241 (398)
....+ |+|++|+..=--..-=+-+.++....|+.
T Consensus 120 ~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~ 154 (343)
T 2v9d_A 120 QHAQQAGADGIVVINPYYWKVSEANLIRYFEQVAD 154 (343)
T ss_dssp HHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Done!