BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2590
(504 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NWL|A Chain A, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|B Chain B, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|C Chain C, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|D Chain D, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
Length = 527
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH ++PLI VG+LVL++NP NYFAEVEQ+AF PS++ PGIEPSPDKMLQGRLF+YPD
Sbjct: 301 KVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPD 360
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMA-FNNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYLQ+PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSFS P+
Sbjct: 361 THRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEHQPSALE 420
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
SGDV R+NS+++DN +Q F+ +L++++R RL +NI G LK+A IQ
Sbjct: 421 HRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDAQLFIQ 475
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 98 QDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGY 154
+D +F FI + P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHM+GY
Sbjct: 156 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMDGY 215
Query: 155 GSHTFKLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCECGAASHK 198
GSHTFKLVNA+G+AVYCKFHYK Q +N S+ + +H+
Sbjct: 216 GSHTFKLVNADGEAVYCKFHYKT---DQGIKNLSVEDAARLAHE 256
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q PD LTT GNP+ DK N LT GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 19 RAAQKPDVLTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 78
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 79 AGAFGYFEVTHDITRYSKAKVF 100
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 169 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 202
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI + P++ +D DM WDF SLRPES HQ +F
Sbjct: 144 DLVGNNT---PIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 200
Query: 59 WD 60
D
Sbjct: 201 SD 202
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 35 QDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 71
+D +F FI + P++ +D DM WDF SLRPES HQ
Sbjct: 156 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQ 195
>pdb|7CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
pdb|4BLC|A Chain A, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|B Chain B, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|C Chain C, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|D Chain D, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|1TGU|A Chain A, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|B Chain B, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|C Chain C, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|D Chain D, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TH2|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH3|A Chain A, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|B Chain B, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|C Chain C, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|D Chain D, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH4|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|7CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
Length = 506
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH ++PLI VG+LVL++NP NYFAEVEQ+AF PS++ PGIEPSPDKMLQGRLF+YPD
Sbjct: 300 KVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPD 359
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMA-FNNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYLQ+PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSFS P+
Sbjct: 360 THRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEHQPSALE 419
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
SGDV R+NS+++DN +Q F+ +L++++R RL +NI G LK+A IQ
Sbjct: 420 HRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDAQLFIQ 474
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 98 QDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGY 154
+D +F FI P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHM+GY
Sbjct: 155 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMDGY 214
Query: 155 GSHTFKLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCECGAASHK 198
GSHTFKLVNA+G+AVYCKFHYK Q +N S+ + +H+
Sbjct: 215 GSHTFKLVNADGEAVYCKFHYKT---DQGIKNLSVEDAARLAHE 255
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q PD LTT GNP+ DK N LT GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 18 RAAQKPDVLTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 77
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 78 AGAFGYFEVTHDITRYSKAKVF 99
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 168 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 201
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI P++ +D DM WDF SLRPES HQ +F
Sbjct: 143 DLVGNNT---PIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 199
Query: 59 WD 60
D
Sbjct: 200 SD 201
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 35 QDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQ 71
+D +F FI P++ +D DM WDF SLRPES HQ
Sbjct: 155 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQ 194
>pdb|1QQW|A Chain A, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|B Chain B, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|C Chain C, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|D Chain D, Crystal Structure Of Human Erythrocyte Catalase
pdb|1F4J|A Chain A, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|B Chain B, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|C Chain C, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|D Chain D, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
Length = 527
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH+++PLI VG+LVL++NP NYFAEVEQIAF PS++ PGIE SPDKMLQGRLF+YPD
Sbjct: 301 KVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPD 360
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMAF-NNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYL +PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSF P++
Sbjct: 361 THRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALE 420
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
+ SG+V R+N++++DN +Q F+ N+L++++R RL +NI G LK+A IQ
Sbjct: 421 HSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQ 475
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 56/67 (83%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHMNGYGSHTFKLVNA G+AVY
Sbjct: 172 PQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY 231
Query: 171 CKFHYKV 177
CKFHYK
Sbjct: 232 CKFHYKT 238
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q D LTT GNP+ DK NV+T GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 19 RAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 78
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 79 AGAFGYFEVTHDITKYSKAKVF 100
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 169 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 202
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI + P++ +D DM WDF SLRPES HQ +F
Sbjct: 144 DLVGNNT---PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 200
Query: 59 WD 60
D
Sbjct: 201 SD 202
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 48 PESTHQDWDMFWDFISLRPESTHQ 71
P++ +D DM WDF SLRPES HQ
Sbjct: 172 PQTHLKDPDMVWDFWSLRPESLHQ 195
>pdb|3RGP|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGS|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RE8|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
Length = 499
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH ++PLI VG+LVL++NP NYFAEVEQ+AF PS++ PGIEPSPDKMLQGRLF+YPD
Sbjct: 298 KVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPD 357
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMA-FNNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYLQ+PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSFS P+
Sbjct: 358 THRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEHQPSALE 417
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
SGDV R+NS+++DN +Q F+ +L++++R RL +NI G LK+A IQ
Sbjct: 418 HRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDAQLFIQ 472
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
Query: 98 QDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGY 154
+D +F FI P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHMNGY
Sbjct: 153 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGY 212
Query: 155 GSHTFKLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCECGAASHK 198
GSHTFKLVNA G+AVYCKFHYK Q +N S+ + +H+
Sbjct: 213 GSHTFKLVNANGEAVYCKFHYKT---DQGIKNLSVEDAARLAHE 253
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q PD LTT GNP+ DK N LT GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 16 RAAQKPDVLTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 75
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 76 AGAFGYFEVTHDITRYSKAKVF 97
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 166 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 199
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI P++ +D DM WDF SLRPES HQ +F
Sbjct: 141 DLVGNNT---PIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 197
Query: 59 WD 60
D
Sbjct: 198 SD 199
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 35 QDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQ 71
+D +F FI P++ +D DM WDF SLRPES HQ
Sbjct: 153 RDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQ 192
>pdb|1DGG|A Chain A, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|B Chain B, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|C Chain C, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|D Chain D, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGF|A Chain A, Human Erythrocyte Catalase
pdb|1DGF|B Chain B, Human Erythrocyte Catalase
pdb|1DGF|C Chain C, Human Erythrocyte Catalase
pdb|1DGF|D Chain D, Human Erythrocyte Catalase
Length = 497
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH+++PLI VG+LVL++NP NYFAEVEQIAF PS++ PGIE SPDKMLQGRLF+YPD
Sbjct: 297 KVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPD 356
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMAF-NNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYL +PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSF P++
Sbjct: 357 THRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALE 416
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
+ SG+V R+N++++DN +Q F+ N+L++++R RL +NI G LK+A IQ
Sbjct: 417 HSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQ 471
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 56/67 (83%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHMNGYGSHTFKLVNA G+AVY
Sbjct: 168 PQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY 227
Query: 171 CKFHYKV 177
CKFHYK
Sbjct: 228 CKFHYKT 234
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q D LTT GNP+ DK NV+T GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 15 RAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 74
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 75 AGAFGYFEVTHDITKYSKAKVF 96
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 165 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 198
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI P++ +D DM WDF SLRPES HQ +F
Sbjct: 140 DLVGNNT---PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 196
Query: 59 WD 60
D
Sbjct: 197 SD 198
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 48 PESTHQDWDMFWDFISLRPESTHQ 71
P++ +D DM WDF SLRPES HQ
Sbjct: 168 PQTHLKDPDMVWDFWSLRPESLHQ 191
>pdb|1DGH|A Chain A, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|C Chain C, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGB|A Chain A, Human Erythrocyte Catalase
pdb|1DGB|B Chain B, Human Erythrocyte Catalase
pdb|1DGB|C Chain C, Human Erythrocyte Catalase
pdb|1DGB|D Chain D, Human Erythrocyte Catalase
Length = 498
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH+++PLI VG+LVL++NP NYFAEVEQIAF PS++ PGIE SPDKMLQGRLF+YPD
Sbjct: 298 KVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPD 357
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMAF-NNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYL +PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSF P++
Sbjct: 358 THRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALE 417
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
+ SG+V R+N++++DN +Q F+ N+L++++R RL +NI G LK+A IQ
Sbjct: 418 HSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQ 472
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 56/67 (83%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHMNGYGSHTFKLVNA G+AVY
Sbjct: 169 PQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY 228
Query: 171 CKFHYKV 177
CKFHYK
Sbjct: 229 CKFHYKT 235
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q D LTT GNP+ DK NV+T GP+GP+L+QD + DE++HFDRERIPERVVHAKG
Sbjct: 16 RAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKG 75
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 76 AGAFGYFEVTHDITKYSKAKVF 97
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 166 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 199
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI P++ +D DM WDF SLRPES HQ +F
Sbjct: 141 DLVGNNT---PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 197
Query: 59 WD 60
D
Sbjct: 198 SD 199
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 48 PESTHQDWDMFWDFISLRPESTHQ 71
P++ +D DM WDF SLRPES HQ
Sbjct: 169 PQTHLKDPDMVWDFWSLRPESLHQ 192
>pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|D Chain D, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
Length = 498
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH+++PLI VG+LVL++NP NYFAEVEQIAF PS++ PGIE SPDKMLQGRLF+YPD
Sbjct: 298 KVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPD 357
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMAF-NNQGGAPNYFPNSFSGPQESERGRL 446
THRHRLGPNYL +PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSF P++
Sbjct: 358 THRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALE 417
Query: 447 STFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQ 500
+ SG+V R+N++++DN +Q F+ N+L++++R RL +NI G LK+A IQ
Sbjct: 418 HSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQ 472
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 56/67 (83%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P++ +D DM WDF SLRPES HQ LFSDRGIPDG+RHMNGYGSHTFKLVNA G+AVY
Sbjct: 169 PQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY 228
Query: 171 CKFHYKV 177
CKFHYK
Sbjct: 229 CKFHYKT 235
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 227 RFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKG 286
R Q D LTT GNP+ DK NV+T GP+GP+L+QD + DE++HFDRERIPERVV AKG
Sbjct: 16 RAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVXAKG 75
Query: 287 AGELFLLSLSYD---YRKGKEF 305
AG +++D Y K K F
Sbjct: 76 AGAFGYFEVTHDITKYSKAKVF 97
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
KRNP THLKD DM WDF SLRPES HQ +F D
Sbjct: 166 KRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSD 199
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI---SLRPESTHQDWDMFWDFISLRPESTHQDWDMF 58
DLV + P+ ++D +F FI P++ +D DM WDF SLRPES HQ +F
Sbjct: 141 DLVGNNT---PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLF 197
Query: 59 WD 60
D
Sbjct: 198 SD 199
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 48 PESTHQDWDMFWDFISLRPESTHQ 71
P++ +D DM WDF SLRPES HQ
Sbjct: 169 PQTHLKDPDMVWDFWSLRPESLHQ 192
>pdb|1SI8|A Chain A, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|B Chain B, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|C Chain C, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|D Chain D, Crystal Structure Of E. Faecalis Catalase
Length = 484
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 333 REFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTHRHR 392
+E+PLIEVG + L++NP NYFAEVEQ+ FSP + VPGIE SPDK+LQGRLF+Y D HRHR
Sbjct: 285 KEYPLIEVGTMTLNRNPENYFAEVEQVTFSPGNFVPGIEASPDKLLQGRLFAYGDAHRHR 344
Query: 393 LGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFS-GPQESERGRLSTFAV 451
+G N QLP+N A V NYQ+DG M FNN NY PNS++ P+E ++S+F V
Sbjct: 345 VGANSHQLPINQAKA-PVNNYQKDGNMRFNNGNSEINYEPNSYTETPKEDPTAKISSFEV 403
Query: 452 SGDVARYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGAL 492
G+V Y S ++D+F+Q +N+L +E++ L++NI +L
Sbjct: 404 EGNVGNY-SYNQDHFTQANALYNLLPSEEKENLINNIAASL 443
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 98 QDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGY 154
+D F DFI + P + + + WDF S PES HQ IL SDRGIP +RHM+G+
Sbjct: 135 RDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSDRGIPLSFRHMHGF 194
Query: 155 GSHTFKLVNAEGKAVYCKFHYKVRK 179
GSHTFK VNA G+ + K+H+K +
Sbjct: 195 GSHTFKWVNAAGEVFFVKYHFKTNQ 219
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGE--LFL 292
LTT+ G+P+ D N LTAG GPVL+QD + L++++HF+RER+PERVVHAKGAG +F
Sbjct: 6 LTTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGIFK 65
Query: 293 LSLSYDYRKGKEFL 306
+S S +FL
Sbjct: 66 VSQSMAQYTKADFL 79
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
D + SQ KRNP THLK + WDF S PES HQ + D
Sbjct: 142 DFIHSQ-KRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSD 181
>pdb|2XQ1|A Chain A, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|B Chain B, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|C Chain C, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|D Chain D, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|E Chain E, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|F Chain F, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|G Chain G, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|H Chain H, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|I Chain I, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|J Chain J, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|K Chain K, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|L Chain L, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|M Chain M, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|N Chain N, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|O Chain O, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|P Chain P, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
Length = 509
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWPH++FPL G+ L++NP NY+AE EQIAFSPSH VPG+EPS D +LQ RLFSYPD
Sbjct: 293 KVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAFSPSHTVPGMEPSNDPVLQSRLFSYPD 352
Query: 388 THRHRLGPNYLQLPVNCPFATKVAN-YQRDGPMAFN-NQGGAPNYFPNSFSGPQE----- 440
THRHRLGPNY Q+PVNCP + N RDGPM + N GG PNY N+++ P +
Sbjct: 353 THRHRLGPNYHQIPVNCPLKSGSFNPINRDGPMCVDGNLGGTPNY-ANAYNCPIQYAVSP 411
Query: 441 SERGRLSTFAVSGDVARYNSSDED-NFSQCTMFWNILSQ--DERDRLVDNIVGALKNAND 497
G +G+V Y+ D ++ Q MFW +L + E++ LV N+ + A++
Sbjct: 412 KASGNKPDEKYTGEVVPYHWEHTDYDYFQPKMFWKVLGRTPGEQESLVKNVANHVSAADE 471
Query: 498 LIQ 500
IQ
Sbjct: 472 FIQ 474
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P + +D +MFWD+++ ES HQ M LFS+RG P YR MNGY HT+K N++G+ VY
Sbjct: 164 PATNLKDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVY 223
Query: 171 CKFHY 175
+ H+
Sbjct: 224 VQVHF 228
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 229 VQNPDTLTTATGNPIDD----------KNNVLTAGPKGPVLLQDFNYLDEISHFDRERIP 278
+ NP TT+ G P+ D A P GP+LLQDF +D +SHFDRERIP
Sbjct: 3 MANPPVFTTSQGCPVSDPFTTQRIPLDSTGYKYAPPIGPLLLQDFKLIDTLSHFDRERIP 62
Query: 279 ERVVHAKGAGELFLLSLSYD 298
ERVVHAKGAG + ++ D
Sbjct: 63 ERVVHAKGAGAYGVFEVTDD 82
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQDWDMF 40
KRNP T+LKD +MFWD+++ ES HQ +F
Sbjct: 161 KRNPATNLKDPNMFWDYLTANDESLHQVMYLF 192
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQDWDM 57
+DLV + P+ ++D F FI + P + +D +MFWD+++ ES HQ +
Sbjct: 135 LDLVYNNT---PIFFIRDPIKFPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYL 191
Query: 58 F 58
F
Sbjct: 192 F 192
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A
Recombinant Catalase Depleted In Iron
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQG
Sbjct: 273 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQG 332
Query: 381 RLFSYPDTHRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFS 436
RLFSY D HR+RLG N+ Q+PVN CPF NY RDG M + N G Y PNS
Sbjct: 333 RLFSYGDAHRYRLGVNHHQIPVNAPKCPF----HNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 437 GPQESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA 495
QE + ++ G +N DED FSQ + +LS DE R+ I G L A
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQA 448
Query: 496 NDLIQ 500
+ Q
Sbjct: 449 SKETQ 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER HAKG+G +
Sbjct: 6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTFT 65
Query: 295 LSYDYRKGKEFLLSLHYRKGAAPFTNYSSI 324
+++D K + K F +S++
Sbjct: 66 VTHDITKYTRAKIFSEVGKKTEMFARFSTV 95
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 17 KDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
K +MF F ++ E D + +L+ + +WDM + PV
Sbjct: 84 KKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGN------------NTPV 131
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTM 136
+L+D F P+ H + P + ++ WDF S PES HQ
Sbjct: 132 FYLRDPLKF-------PDLNH--------IVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 176
Query: 137 ILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
I SDRG+P YR ++G+GSHT+ +N + + + KFH++ ++
Sbjct: 177 IDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQ 219
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
VKR+P T++++ WDF S PES HQ
Sbjct: 147 VKRDPRTNMRNMAYKWDFFSHLPESLHQ 174
>pdb|3HB6|A Chain A, Inactive Mutant H54f Of Proteus Mirabilis Catalase
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQG
Sbjct: 273 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQG 332
Query: 381 RLFSYPDTHRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFS 436
RLFSY D HR+RLG N+ Q+PVN CPF NY RDG M + N G Y PNS
Sbjct: 333 RLFSYGDAHRYRLGVNHHQIPVNAPKCPF----HNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 437 GPQESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA 495
QE + ++ G +N DED FSQ + +LS DE R+ I G L A
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQA 448
Query: 496 NDLIQ 500
+ Q
Sbjct: 449 SKETQ 453
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER + AKG+G +
Sbjct: 6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMFAKGSGAFGTFT 65
Query: 295 LSYDYRKGKEFLLSLHYRKGAAPFTNYSSI 324
+++D K + K F +S++
Sbjct: 66 VTHDITKYTRAKIFSEVGKKTEMFARFSTV 95
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 17 KDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
K +MF F ++ E D + +L+ + +WDM + PV
Sbjct: 84 KKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGN------------NTPV 131
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTM 136
+L+D F P+ H + P + ++ WDF S PES HQ
Sbjct: 132 FYLRDPLKF-------PDLNH--------IVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 176
Query: 137 ILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
I SDRG+P YR ++G+GSHT+ +N + + + KFH++ ++
Sbjct: 177 IDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQ 219
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
VKR+P T++++ WDF S PES HQ
Sbjct: 147 VKRDPRTNMRNMAYKWDFFSHLPESLHQ 174
>pdb|1H7K|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 483
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQG
Sbjct: 272 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQG 331
Query: 381 RLFSYPDTHRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFS 436
RLFSY D HR+RLG N+ Q+PVN CPF NY RDG M + N G Y PNS
Sbjct: 332 RLFSYGDAHRYRLGVNHHQIPVNAPKCPF----HNYHRDGAMRVDGNSGNGITYEPNSGG 387
Query: 437 GPQESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA 495
QE + ++ G +N DED FSQ + +LS DE R+ I G L A
Sbjct: 388 VFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQA 447
Query: 496 NDLIQ 500
+ Q
Sbjct: 448 SKETQ 452
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER HAKG+G +
Sbjct: 5 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTFT 64
Query: 295 LSYDYRKGKEFLLSLHYRKGAAPFTNYSSI 324
+++D K + K F +S++
Sbjct: 65 VTHDITKYTRAKIFSEVGKKTEMFARFSTV 94
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 17 KDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
K +MF F ++ E D + +L+ + +WDM + PV
Sbjct: 83 KKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGN------------NTPV 130
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTM 136
+L+D F P+ H + P + ++ WDF S PES HQ
Sbjct: 131 FYLRDPLKF-------PDLNH--------IVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 175
Query: 137 ILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
I SDRG+P YR ++G+GSHT+ +N + + + KFHY+ ++
Sbjct: 176 IDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHYRCQQ 218
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
VKR+P T++++ WDF S PES HQ
Sbjct: 146 VKRDPRTNMRNMAYKWDFFSHLPESLHQ 173
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native
Form
pdb|1MQF|A Chain A, Compound I From Proteus Mirabilis Catalase
pdb|1NM0|A Chain A, Proteus Mirabilis Catalase In Complex With Formiate
pdb|2CAG|A Chain A, Catalase Compound Ii
pdb|2CAH|A Chain A, Structure Of Proteus Mirabilis Pr Catalase For The Native
Form (e- Fe(iii)) Complexed With Nadph
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQG
Sbjct: 273 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQG 332
Query: 381 RLFSYPDTHRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFS 436
RLFSY D HR+RLG N+ Q+PVN CPF NY RDG M + N G Y PNS
Sbjct: 333 RLFSYGDAHRYRLGVNHHQIPVNAPKCPF----HNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 437 GPQESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA 495
QE + ++ G +N DED FSQ + +LS DE R+ I G L A
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQA 448
Query: 496 NDLIQ 500
+ Q
Sbjct: 449 SKETQ 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER HAKG+G +
Sbjct: 6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTFT 65
Query: 295 LSYDYRKGKEFLLSLHYRKGAAPFTNYSSI 324
+++D K + K F +S++
Sbjct: 66 VTHDITKYTRAKIFSEVGKKTEMFARFSTV 95
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 17 KDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
K +MF F ++ E D + +L+ + +WDM + PV
Sbjct: 84 KKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGN------------NTPV 131
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTM 136
+L+D F P+ H + P + ++ WDF S PES HQ
Sbjct: 132 FYLRDPLKF-------PDLNH--------IVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 176
Query: 137 ILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
I SDRG+P YR ++G+GSHT+ +N + + + KFH++ ++
Sbjct: 177 IDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQ 219
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
VKR+P T++++ WDF S PES HQ
Sbjct: 147 VKRDPRTNMRNMAYKWDFFSHLPESLHQ 174
>pdb|1H6N|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQG
Sbjct: 273 YNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQG 332
Query: 381 RLFSYPDTHRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFS 436
RLFSY D HR+RLG N+ Q+PVN CPF NY RDG M + N G Y PNS
Sbjct: 333 RLFSYGDAHRYRLGVNHHQIPVNAPKCPF----HNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 437 GPQESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA 495
QE + ++ G +N DED FSQ + +LS DE R+ I G L A
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQA 448
Query: 496 NDLIQ 500
+ Q
Sbjct: 449 SKETQ 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER HAKG+G +
Sbjct: 6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTFT 65
Query: 295 LSYDYRKGKEFLLSLHYRKGAAPFTNYSSI 324
+++D K + K F +S++
Sbjct: 66 VTHDITKYTRAKIFSEVGKKTEMFARFSTV 95
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 17 KDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
K +MF F ++ E D + +L+ + +WDM + PV
Sbjct: 84 KKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGN------------NTPV 131
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTM 136
+L+D F P+ H + P + ++ WDF S PES HQ
Sbjct: 132 FYLRDPLKF-------PDLNH--------IVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 176
Query: 137 ILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
I SDRG+P YR ++GYGSHT+ +N + + + KFH++ ++
Sbjct: 177 IDMSDRGLPLSYRFVHGYGSHTYSFINKDNERFWVKFHFRCQQ 219
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
VKR+P T++++ WDF S PES HQ
Sbjct: 147 VKRDPRTNMRNMAYKWDFFSHLPESLHQ 174
>pdb|2J2M|A Chain A, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|B Chain B, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|C Chain C, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|D Chain D, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
Length = 491
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 330 WPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTH 389
W P VG + L+KN NYFAE E + F+P LVPG+ PS DK+LQGRLFSY DT
Sbjct: 284 WFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLVPGMLPSEDKLLQGRLFSYSDTQ 343
Query: 390 RHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG-PQESERGRLST 448
RHR+GPNY QLP+NCPFA +V NYQRDG M F Q + NY PN + P+++ T
Sbjct: 344 RHRIGPNYQQLPINCPFA-QVNNYQRDGAMPFKQQTSSVNYEPNRYQDEPKQTPEYTEDT 402
Query: 449 FAVSGDV-ARYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGALK 493
+ D+ R +NF Q + ++++E+ L++N+V L+
Sbjct: 403 QPLHDDIHGRLEIEKTNNFGQAGEVYRRMTEEEQMALLNNLVNDLQ 448
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 86 WDFISLR-PESTHQDWDMFWDFI-SLRPE--STHQDWDMFWDFISLRPESTHQTMILFSD 141
WDF+ P +D F D + SL+P+ + QD D +WDF++LRPEST+ M +F+D
Sbjct: 124 WDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTD 183
Query: 142 RGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHY 175
GIP YR M G H+FK VNA G VY K +
Sbjct: 184 EGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRW 217
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 230 QNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGE 289
+N LTT G PI D N TAG +GP LL+D+ +++I+HFDRER+PERVVHA+G G
Sbjct: 3 ENEKKLTTNQGVPIGDNQNSRTAGRRGPTLLEDYQLIEKIAHFDRERVPERVVHARGFGA 62
Query: 290 LFLLSLSYDYRK 301
+ + +K
Sbjct: 63 HGVFKVKNSMKK 74
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 12 PVTHLKDWDMFWDFI-SLRPE--STHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPES 68
PV ++D F D + SL+P+ + QD D +WDF++LRPEST+ +F D P S
Sbjct: 132 PVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTD--EGIPAS 189
Query: 69 THQKRNPVTHLKDW 82
+ R H W
Sbjct: 190 YRKMRGSSVHSFKW 203
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWD 42
D+V S +K +P T+++D D +WDF++LRPEST+ +F D
Sbjct: 144 DMVHS-LKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTD 183
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase
pdb|1QWL|B Chain B, Structure Of Helicobacter Pylori Catalase
pdb|1QWM|A Chain A, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
pdb|1QWM|B Chain B, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
Length = 505
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 14/175 (8%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++W +++PL+EVG + L+KNP NYFAEVEQ AF+P+++VPGI SPD+MLQGRLFSY D
Sbjct: 282 KIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGD 341
Query: 388 THRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERG 444
THR+RLG NY Q+PVN CPF + RDG M G NY P+S G +E +
Sbjct: 342 THRYRLGVNYPQIPVNKPRCPFHSS----SRDGYMQNGYYGSLQNYTPSSLPGYKEDKSA 397
Query: 445 RLSTFAVSGDVAR-------YNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGAL 492
R F ++ Y + D D ++Q ++ L DE++RL D I +L
Sbjct: 398 RDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESL 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 236 TTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLSL 295
TTA G P+ D NNV+TAGP+GPVLLQ +L++++ FDRERIPERVVHAKG+G ++
Sbjct: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
Query: 296 SYD---YRKGKEF 305
+ D Y K K F
Sbjct: 69 TKDITKYTKAKIF 81
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 103 FWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTF 159
F DFI + P++ + DM WDF S PES +Q + SDRGIP +RHM+G+GSHTF
Sbjct: 142 FPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTF 201
Query: 160 KLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCEC 192
L+NA+G+ + KFH+ + + N E
Sbjct: 202 SLINAKGERFWVKFHFHTMQGVKHLTNEEAAEI 234
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQ 35
D + +Q KR+P T+L + DM WDF S PES +Q
Sbjct: 144 DFIHTQ-KRDPQTNLPNHDMVWDFWSNVPESLYQ 176
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + PV ++D F DFI + P++ + DM WDF S PES +Q
Sbjct: 125 DLVGNNT---PVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQ 176
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I
pdb|2A9E|B Chain B, Helicobacter Pylori Catalase Compound I
pdb|2IQF|A Chain A, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
pdb|2IQF|B Chain B, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
Length = 505
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 105/175 (60%), Gaps = 14/175 (8%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++W +++PL EVG + L+KNP NYFAEVEQ AF+P+++VPGI SPD+MLQGRLFSY D
Sbjct: 282 KIWYTQDYPLXEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGD 341
Query: 388 THRHRLGPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERG 444
THR+RLG NY Q+PVN CPF + RDG G NY P+S G +E +
Sbjct: 342 THRYRLGVNYPQIPVNKPRCPFHSS----SRDGYXQNGYYGSLQNYTPSSLPGYKEDKSA 397
Query: 445 RLSTFAVSGDVAR-------YNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGAL 492
R F ++ Y + D D ++Q ++ L DE++RL D I +L
Sbjct: 398 RDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESL 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 236 TTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLSL 295
TTA G P+ D NNV+TAGP+GPVLLQ +L++++ FDRERIPERVVHAKG+G ++
Sbjct: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
Query: 296 SYD---YRKGKEF 305
+ D Y K K F
Sbjct: 69 TKDITKYTKAKIF 81
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 103 FWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTF 159
F DFI + P++ + D WDF S PES +Q + SDRGIP +RHM+G+GSHTF
Sbjct: 142 FPDFIHTQKRDPQTNLPNHDXVWDFWSNVPESLYQVTWVXSDRGIPKSFRHMDGFGSHTF 201
Query: 160 KLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCEC 192
L+NA+G+ + KFH+ + + N E
Sbjct: 202 SLINAKGERFWVKFHFHTMQGVKHLTNEEAAEI 234
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQ 35
D + +Q KR+P T+L + D WDF S PES +Q
Sbjct: 144 DFIHTQ-KRDPQTNLPNHDXVWDFWSNVPESLYQ 176
>pdb|2ISA|A Chain A, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|B Chain B, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|C Chain C, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|D Chain D, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|E Chain E, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|F Chain F, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|G Chain G, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|H Chain H, Crystal Structure Of Vibrio Salmonicida Catalase
Length = 483
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
Query: 321 YSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQG 380
Y+ +VWPH+++PLIEVG+ L++NP NYFAEVEQ AF+P+++VPGI SPDKMLQG
Sbjct: 272 YNPFDLTKVWPHKDYPLIEVGEFELNRNPQNYFAEVEQAAFNPANVVPGISFSPDKMLQG 331
Query: 381 RLFSYPDTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFSGPQ 439
RLF+Y D R+RLG N+ +PVN P V +Y RDG M + N G Y PN
Sbjct: 332 RLFAYGDAQRYRLGVNHQHIPVNAP-RCPVHSYHRDGAMRVDGNFGSTLGYEPNDQGQWA 390
Query: 440 ESERGRLSTFAVSGDVARYN-SSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNANDL 498
E + G A ++ DED FSQ + +++ +++ L DN L
Sbjct: 391 EQPDFSEPPLNLDGAAAHWDHREDEDYFSQPGDLFGLMTAEKQAILFDNTARNLNGVPKE 450
Query: 499 IQ 500
IQ
Sbjct: 451 IQ 452
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLS 294
LTTA G P+ NV TAG +GP LLQD +L++++HFDRE IPER HAKG+G +
Sbjct: 5 LTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRXHAKGSGAYGTFT 64
Query: 295 LSYD---YRKGKEF 305
+++D Y K K F
Sbjct: 65 VTHDITKYTKAKIF 78
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 122 WDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRKRH 181
WDF + PE+ HQ I+ SDRGIP YRHM+G+GSHTF +N++ + + KFH+ +
Sbjct: 161 WDFWTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERYWVKFHFVSQ--- 217
Query: 182 QKRQNTSLCECG 193
Q +N S E G
Sbjct: 218 QGIKNLSDAEAG 229
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWP +FPL VG++VL++NP N+FA+VEQ AF+PS VP E S D +LQ RLFSY D
Sbjct: 284 KVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYAD 343
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQ-RDGPMAFN-NQGGAPNYFPNSFS 436
HR+RLGPN+ Q+PVNCP+A+K N RDGPM N N G P Y N S
Sbjct: 344 AHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKS 394
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 111 PESTHQDWDMFWDFISLRPE---STHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGK 167
P++ +D DMFWDF++ PE + HQ MILFSDRG P YR M+GY HT+K N G
Sbjct: 153 PQTNLRDADMFWDFLTT-PENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGD 211
Query: 168 AVYCKFHYKV 177
Y + H K
Sbjct: 212 WHYVQVHIKT 221
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 229 VQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
V+ +T +TGNPI++ G GP+LLQD+N +D ++HF+RE IP+R HA G+G
Sbjct: 2 VREDRVVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSG 61
Query: 289 ELFLLSLSYD 298
++ D
Sbjct: 62 AFGYFEVTDD 71
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPE---STHQDWDMFWD 42
KRNP T+L+D DMFWDF++ PE + HQ +F D
Sbjct: 150 KRNPQTNLRDADMFWDFLTT-PENQVAIHQVMILFSD 185
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 12 PVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPE---STHQDWDMFWD 60
PV ++D F FI + P++ +D DMFWDF++ PE + HQ +F D
Sbjct: 132 PVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTT-PENQVAIHQVMILFSD 185
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|B Chain B, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|C Chain C, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|D Chain D, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
Length = 484
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 320 NYSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQ 379
++ + ++WP + P ++GQ+VL+KN N+F E EQ+A +P++LVPGIEPS D++LQ
Sbjct: 269 DFDPLDATKIWP--DVPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQ 326
Query: 380 GRLFSYPDTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQ 439
GR+FSY DT +RLG N L LPVN P V N +DG + + NY P+
Sbjct: 327 GRVFSYADTQMYRLGANGLSLPVNQP-KVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRP 385
Query: 440 ESERGRLSTFAVSGDVARYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNA---- 495
++ R S +SG + + E NF Q + S E+ LV +L +
Sbjct: 386 ADDKARYSELPLSGTTQQAKITREQNFKQAGDLYRSYSAKEKTDLVQKFGESLADTLTES 445
Query: 496 -NDLIQYLY 503
N ++ YLY
Sbjct: 446 KNIMLSYLY 454
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 38/56 (67%)
Query: 233 DTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
DTLT G + D N TAG +GPVLLQD L ++ FDRERIPERVVHA+G G
Sbjct: 2 DTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTG 57
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 66 PESTHQKRNPVTHLKDWDMFWDFISLR-PESTHQDWDMFWDFI-SLRPE-STHQDWD-MF 121
PE+ T D WD + P +D F D + + +P+ T+ D D
Sbjct: 99 PETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRR 158
Query: 122 WDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYK 176
+DF S PE+T +L+S+ G P GYR M+G G H +KLVNA+G+ Y KFH+K
Sbjct: 159 FDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWK 213
>pdb|1GWH|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase Complexed With Nadph
pdb|1GWE|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 289 ELFLLSLSYDYRKGKEFLLSLHYRKGAA----PFTNYSSIFCHQVWPHREFPLIEVGQLV 344
+LF D+ K ++ ++ Y +G PF +I +++P I+VG L
Sbjct: 249 DLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTI------SQKDYPRIKVGTLT 302
Query: 345 LDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTHRHRLGPNYLQLPVNC 404
L++NP N+FA++E AFSPS+ VPGI SPD+ML GR F+Y D +R+G + QLPVN
Sbjct: 303 LNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNR 362
Query: 405 PFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRL-STFAVSGDVARYNS--- 460
P V NY +G M +++ G Y PNS E G + + G + R
Sbjct: 363 P-KNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALR 421
Query: 461 SDEDNFSQC-TMFWNILSQDERDRLVDNIVGALKNANDLIQ 500
+D+D+F Q T+ + S ERD V+ + GALK +Q
Sbjct: 422 ADDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQ 462
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P+S +D M WDF + PES HQ L RG+P +R MNGYGSHT+ VNA+G+ +
Sbjct: 157 PDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHW 216
Query: 171 CKFHY 175
K+H+
Sbjct: 217 VKYHF 221
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 236 TTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLSL 295
T G P LT G +GP++L D + L+ HF+R IPER HAKG+G +
Sbjct: 14 TRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEV 73
Query: 296 SYDYRKGKEFLL 307
+ D K + L+
Sbjct: 74 TEDVSKYTKALV 85
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQ 35
KR P + L+D M WDF + PES HQ
Sbjct: 154 KRLPDSGLRDATMQWDFWTNNPESAHQ 180
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + P+ L+D F FI + P+S +D M WDF + PES HQ
Sbjct: 129 DLVGNNT---PIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQ 180
>pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu
Length = 498
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 289 ELFLLSLSYDYRKGKEFLLSLHYRKGAA----PFTNYSSIFCHQVWPHREFPLIEVGQLV 344
+LF D+ K ++ ++ Y +G PF +I +++P I+VG L
Sbjct: 244 DLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTI------SQKDYPRIKVGTLT 297
Query: 345 LDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTHRHRLGPNYLQLPVNC 404
L++NP N+FA++E AFSPS+ VPGI SPD+ML GR F+Y D +R+G + QLPVN
Sbjct: 298 LNRNPKNHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNR 357
Query: 405 PFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRL-STFAVSGDVARYNS--- 460
P V NY +G M +++ G Y PNS E G + + G + R
Sbjct: 358 P-KNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALR 416
Query: 461 SDEDNFSQC-TMFWNILSQDERDRLVDNIVGALKNANDLIQ 500
+D+D+F Q T+ + S ERD V+ + GALK +Q
Sbjct: 417 ADDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQ 457
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P+S +D M WDF + PES HQ L RG+P +R MNGYGSHT+ VNA+G+ +
Sbjct: 152 PDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHW 211
Query: 171 CKFHY 175
K+H+
Sbjct: 212 VKYHF 216
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 236 TTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLSL 295
T G P LT G +GP++L D + L+ HF+R IPER HAKG+G +
Sbjct: 9 TRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEV 68
Query: 296 SYDYRKGKEFLL 307
+ D K + L+
Sbjct: 69 TEDVSKYTKALV 80
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 9 KRNPVTHLKDWDMFWDFISLRPESTHQ 35
KR P + L+D M WDF + PES HQ
Sbjct: 149 KRLPDSGLRDATMQWDFWTNNPESAHQ 175
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + P+ L+D F FI + P+S +D M WDF + PES HQ
Sbjct: 124 DLVGNNT---PIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQ 175
>pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 289 ELFLLSLSYDYRKGKEFLLSLHYRKGAA----PFTNYSSIFCHQVWPHREFPLIEVGQLV 344
+LF D+ K ++ ++ Y +G PF +I +++P I+VG L
Sbjct: 249 DLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTI------SQKDYPRIKVGTLT 302
Query: 345 LDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTHRHRLGPNYLQLPVNC 404
L++NP N+FA++E AFSPS+ VPGI SPD+ML GR F+Y D +R+G + QLPVN
Sbjct: 303 LNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNR 362
Query: 405 PFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRL-STFAVSGDVARYNS--- 460
P V NY +G +++ G Y PNS E G + + G + R
Sbjct: 363 P-KNAVHNYAFEGQXWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALR 421
Query: 461 SDEDNFSQC-TMFWNILSQDERDRLVDNIVGALKNANDLIQ 500
+D+D+F Q T+ + S ERD V+ + GALK +Q
Sbjct: 422 ADDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQ 462
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 111 PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVY 170
P+S +D WDF + PES HQ L RG+P +R MNGYGSHT+ VNA+G+ +
Sbjct: 157 PDSGLRDATXQWDFWTNNPESAHQVTYLXGPRGLPRTWREMNGYGSHTYLWVNAQGEKHW 216
Query: 171 CKFHY 175
K+H+
Sbjct: 217 VKYHF 221
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 236 TTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAGELFLLSL 295
T G P LT G +GP++L D + L+ HF+R IPER HAKG+G +
Sbjct: 14 TRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRXNIPERRPHAKGSGAFGEFEV 73
Query: 296 SYDYRKGKEFLL 307
+ D K + L+
Sbjct: 74 TEDVSKYTKALV 85
>pdb|1SY7|A Chain A, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution.
pdb|1SY7|B Chain B, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution
Length = 715
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++WP P+ +G++ L++NP +F + EQIAF SH+V GI S D +LQGR FSY D
Sbjct: 301 KIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSDDPLLQGRNFSYFD 360
Query: 388 THRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQESERGR 445
T RLG N+ +LP+N P V N+ RDG M G NY+PN F P + G
Sbjct: 361 TQISRLGVNFQELPINRP-VCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEGG 419
Query: 446 LSTFA--VSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNIVGALKNANDLIQY 501
+A V+G AR S+ +++FSQ +F+N +S E+ +++ L + D + Y
Sbjct: 420 YLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMINAFGFELDHCEDPVVY 478
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 121 FWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHY 175
FWDF E+TH SDR IP R M G+G +T+ L+NA+GK + KFH+
Sbjct: 182 FWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGVNTYTLINAQGKRHFVKFHW 236
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 244 DDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
DD +++ GP LL+D + I FD ERIPERVVHA+G+G
Sbjct: 32 DDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSG 76
>pdb|4ENP|A Chain A, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|B Chain B, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|C Chain C, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|D Chain D, Structure Of E530a Variant E. Coli Kate
Length = 753
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 17/178 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDNIVGAL 492
+RG ++ V G+ R S S + +S +FW + E+ +VD AL
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFAL 531
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3P9Q|A Chain A, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|B Chain B, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|C Chain C, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|D Chain D, Structure Of I274c Variant Of E. Coli Kate
pdb|3PQ2|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ3|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ4|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ5|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ6|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ7|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ8|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
Length = 753
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES--- 441
T RL GPN+ ++P+N P A N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTA-PYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPG 476
Query: 442 -ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 477 PKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGCHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|B Chain B, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|C Chain C, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|D Chain D, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
Length = 753
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFQPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4ENU|A Chain A, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|B Chain B, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|C Chain C, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|D Chain D, Structure Of The S234d Variant Of E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPES-----THQDW-DMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE QD D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQDAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPES-----THQDW-DMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE QD D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQDAHDTFWDYVSLQPETLH 251
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 35 QDWDMFWDFI-SLRPES-----THQDW-DMFWDFISLRPESTH 70
QD F DF+ +++PE QD D FWD++SL+PE+ H
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQDAHDTFWDYVSLQPETLH 251
>pdb|4ENT|A Chain A, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|B Chain B, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|C Chain C, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|D Chain D, Structure Of The S234a Variant Of E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQAAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQAAHDTFWDYVSLQPETLH 251
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 35 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 70
QD F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQAAHDTFWDYVSLQPETLH 251
>pdb|1P7Z|A Chain A, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|B Chain B, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|C Chain C, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|D Chain D, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1P81|A Chain A, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|B Chain B, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|C Chain C, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|D Chain D, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Query: 11 NPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 203 TPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 35 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 70
QD F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4ENR|A Chain A, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|B Chain B, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|C Chain C, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|D Chain D, Structure Of E530i Variant E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1P80|A Chain A, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|B Chain B, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|C Chain C, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|D Chain D, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1P7Y|A Chain A, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|B Chain B, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|C Chain C, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|D Chain D, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4ENV|A Chain A, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|B Chain B, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|C Chain C, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|D Chain D, Structure Of The S234i Variant Of E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQIAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQIAHDTFWDYVSLQPETLH 251
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 35 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 70
QD F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQIAHDTFWDYVSLQPETLH 251
>pdb|4ENQ|A Chain A, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|B Chain B, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|C Chain C, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|D Chain D, Structure Of E530d Variant E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3P9S|A Chain A, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|B Chain B, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|C Chain C, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|D Chain D, Structure Of I274a Variant Of E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G+HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGAHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGANT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+V A+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVAARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4ENW|A Chain A, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|B Chain B, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|C Chain C, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|D Chain D, Structure Of The S234n Variant Of E. Coli Kate
Length = 753
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQNAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQNAHDTFWDYVSLQPETLH 251
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 35 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 70
QD F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQNAHDTFWDYVSLQPETLH 251
>pdb|1QWS|A Chain A, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|B Chain B, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|C Chain C, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|D Chain D, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|B Chain B, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|C Chain C, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|D Chain D, Structure Of Catalase Hpii From Escherichia Coli
pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3P9R|A Chain A, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|B Chain B, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|C Chain C, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|D Chain D, Structure Of I274g Variant Of E. Coli Kate
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGGHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GGF|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+V+A+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVNARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3P9P|A Chain A, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|B Chain B, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|C Chain C, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|D Chain D, Structure Of I274v Variant Of E. Coli Kate
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGVHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|B Chain B, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|C Chain C, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|D Chain D, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4ENS|A Chain A, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|B Chain B, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|C Chain C, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|D Chain D, Structure Of E530q Variant Of E. Coli Kate
Length = 753
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|2IUF|A Chain A, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
pdb|2IUF|E Chain E, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
Length = 688
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 97/178 (54%), Gaps = 29/178 (16%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ +G++ L++NP NYFAE EQ+ F P H+V G++ + D +LQGRLFSY D
Sbjct: 293 KIVPEELVPVTILGKMQLNRNPXNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLD 352
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYF----PNSFS------ 436
T +R GPN+ QLP+N P A P+ NN+ GA F PN++S
Sbjct: 353 TQLNRHGGPNFEQLPINRPRA----------PIHNNNRDGAGQMFIPLDPNAYSPNTENK 402
Query: 437 -GPQESERGRLSTF------AVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVD 486
P+++ F SG + R S+ E+N+SQ +FWN L +++ +VD
Sbjct: 403 GSPKQANETVGKGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVD 460
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+N+ L+AG +G LLQDF + ++I FD ER+PER VHA+G G
Sbjct: 16 LTSNVGGPIQDENS-LSAGQRGATLLQDFIFREKIQRFDHERVPERAVHARGTG 68
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD +F D I +++P +Q D WDF S +P H + + GIP +RH
Sbjct: 144 QDAILFPDLIHAVKPRGDNQIPQAATAHDSAWDFFSQQPSVLHTLLWAXAGHGIPRSFRH 203
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
+NG+G HTF+LV +GK KFH+K
Sbjct: 204 VNGFGVHTFRLVTDDGKTKLVKFHWK 229
>pdb|2XF2|A Chain A, Pvc-At
pdb|2XF2|E Chain E, Pvc-At
Length = 688
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 29/180 (16%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ +G++ L++NP NYFAE EQ+ F P H+V G++ + D +LQGRLFSY D
Sbjct: 293 KIVPEELVPVTILGKMQLNRNPMNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLD 352
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYF----PNSFS------ 436
T +R GPN+ QLP+N P A P+ NN+ GA F PN++S
Sbjct: 353 TQLNRHGGPNFEQLPINRPRA----------PIHNNNRDGAGQMFIPLDPNAYSPNTENK 402
Query: 437 -GPQESERGRLSTF------AVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNI 488
P+++ F SG + R S+ E+N+SQ +FWN L +++ +VD +
Sbjct: 403 GSPKQANETVGKGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVDAM 462
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD +F D I +++P +Q D WDF S +P H + + GIP +RH
Sbjct: 144 QDAILFPDLIHAVKPRGDNQIPQAATAHDSAWDFFSQQPSVLHTLLWAMAGHGIPRSFRH 203
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
+NG+G HTF+LV +GK KFH+K
Sbjct: 204 VNGFGVHTFRLVTDDGKTKLVKFHWK 229
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+N+ L+AG +G LLQDF + ++I FD ER+PER VHA+G G
Sbjct: 16 LTSNVGGPIQDENS-LSAGQRGATLLQDFIFREKIQRFDHERVPERAVHARGTG 68
>pdb|3TTV|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRL+SY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLYSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKIAHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3TTT|A Chain A, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|B Chain B, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|C Chain C, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|D Chain D, Structure Of F413y Variant Of E. Coli Kate
Length = 753
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRL+SY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLYSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|3TTU|A Chain A, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|B Chain B, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|C Chain C, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|D Chain D, Structure Of F413y/h128n Double Variant Of E. Coli Kate
Length = 753
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRL+SY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLYSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+V+A+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVNARGSA 133
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|1YE9|E Chain E, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|F Chain F, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|G Chain G, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|H Chain H, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|M Chain M, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|N Chain N, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|O Chain O, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|P Chain P, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 259
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 50 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 109
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFS------G 437
T RL GPN+ ++P+N CP+ N+QRDG NY PNS +
Sbjct: 110 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 165
Query: 438 PQESERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVD 486
P +RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 166 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVD 217
>pdb|3TTX|A Chain A, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|B Chain B, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|C Chain C, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|D Chain D, Structure Of The F413k Variant Of E. Coli Kate
Length = 753
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRL SY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLKSYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4AUN|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|E Chain E, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|F Chain F, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|G Chain G, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|H Chain H, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P PL ++G L LD+NP+NYFAE EQ+ F P H+V GI+ + D +LQGRLFSY D
Sbjct: 333 KIIPEEYAPLTKLGLLKLDRNPTNYFAETEQVMFQPGHIVRGIDFTEDPLLQGRLFSYLD 392
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGP-MAFNNQGGAPNYFPNSFS------GPQ 439
T +R GPN+ QLP+N P + N RDG F ++ P Y PN+ + Q
Sbjct: 393 TQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPNTLNSGYPRQANQ 450
Query: 440 ESERGRLST--FAVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNI 488
+ RG + SG + R S D++SQ +F+N L+ E+ LV+ +
Sbjct: 451 NAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSLTPVEQQFLVNAM 502
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+ + L AG +GP LL+DF + +I HFD ER+PER VHA+GAG
Sbjct: 56 LTSDVGGPIQDQTS-LKAGIRGPTLLEDFMFRQKIQHFDHERVPERAVHARGAG 108
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F D I S++P ++ D WDF S +P + H S GIP YRH
Sbjct: 184 QDAIQFPDLIHSVKPRPDNEIPQAATAHDSAWDFFSQQPSTMHTLFWAMSGHGIPRSYRH 243
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
M+G+G HTF+ V +G + K+H+K R+
Sbjct: 244 MDGFGVHTFRFVKDDGSSKLIKWHFKSRQ 272
>pdb|3TTW|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 17/173 (9%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRL SY D
Sbjct: 358 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLESYTD 417
Query: 388 THRHRL-GPNYLQLPVN---CPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG--PQES 441
T RL GPN+ ++P+N CP+ N+QRDG NY PNS + P+E+
Sbjct: 418 TQISRLGGPNFHEIPINRPTCPY----HNFQRDGMHRMGIDTNPANYEPNSINDNWPRET 473
Query: 442 ----ERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDN 487
+RG ++ V G+ R S S + +S +FW + E+ +VD
Sbjct: 474 PPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDG 526
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 209 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 268
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 269 MEGFGIHTFRLINAEGKATFVRFHWK 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 79 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 133
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 2 DLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 197 DLVGNNT---PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251
>pdb|4AUM|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P PL ++G L LD+NP+NYFAE EQ+ F P H+V GI+ + D +LQGRLFSY D
Sbjct: 333 KIIPEEYAPLTKLGLLKLDRNPTNYFAETEQVMFQPGHIVRGIDFTEDPLLQGRLFSYLD 392
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGP-MAFNNQGGAPNYFPNSFS------GPQ 439
T +R GPN+ QLP+N P + N RDG F ++ P Y PN+ + Q
Sbjct: 393 TQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPNTLNSGYPRQANQ 450
Query: 440 ESERGRLST--FAVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNI 488
+ RG + SG + R S D++SQ +F+N L+ E+ LV+ +
Sbjct: 451 NAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSLTPVEQQFLVNAM 502
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+ + L AG +GP LL+DF + +I HFD ER+PER VHA+GAG
Sbjct: 56 LTSDVGGPIQDQTS-LKAGIRGPTLLEDFMFRQKIQHFDHERVPERAVHARGAG 108
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F D I S++P ++ D WDF S +P + H S GIP YRH
Sbjct: 184 QDAIQFPDLIHSVKPRPDNEIPQAATAHDSAWDFFSQQPSTMHTLFWAMSGHGIPRSYRH 243
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
M+G+G HTF+ V +G + K+H+K R+
Sbjct: 244 MDGFGVHTFRFVKDDGSSKLIKWHFKSRQ 272
>pdb|4AUL|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P PL ++G L LD+NP+NYFAE EQ+ F P H+V GI+ + D +LQGRLFSY D
Sbjct: 333 KIIPEEYAPLTKLGLLKLDRNPTNYFAETEQVMFQPGHIVRGIDFTEDPLLQGRLFSYLD 392
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGP-MAFNNQGGAPNYFPNSFS------GPQ 439
T +R GPN+ QLP+N P + N RDG F ++ P Y PN+ + Q
Sbjct: 393 TQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPNTLNSGYPRQANQ 450
Query: 440 ESERGRLST--FAVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNI 488
+ RG + SG + R S D++SQ +F+N L+ E+ LV+ +
Sbjct: 451 NAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSLTPVEQQFLVNAM 502
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+ + L AG +GP LL+DF + +I HFD ER+PER V+A+GAG
Sbjct: 56 LTSDVGGPIQDQTS-LKAGIRGPTLLEDFMFRQKIQHFDHERVPERAVNARGAG 108
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F D I S++P ++ D WDF S +P + H S GIP YRH
Sbjct: 184 QDAIQFPDLIHSVKPRPDNEIPQAATAHDSAWDFFSQQPSTMHTLFWAMSGHGIPRSYRH 243
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
M+G+G HTF+ V +G + K+H+K R+
Sbjct: 244 MDGFGVHTFRFVKDDGSSKLIKWHFKSRQ 272
>pdb|4AUE|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 717
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P PL ++G L LD+NP+NYFAE EQ+ F P H+V GI+ + D +LQGRLFSY D
Sbjct: 331 KIIPEEYAPLTKLGLLKLDRNPTNYFAETEQVMFQPGHIVRGIDFTEDPLLQGRLFSYLD 390
Query: 388 THRHR-LGPNYLQLPVNCPFATKVANYQRDGP-MAFNNQGGAPNYFPNSFS------GPQ 439
T +R GPN+ QLP+N P + N RDG F ++ P Y PN+ + Q
Sbjct: 391 TQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPNTLNSGYPRQANQ 448
Query: 440 ESERGRLST--FAVSGDVARYNSSD-EDNFSQCTMFWNILSQDERDRLVDNI 488
+ RG + SG + R S D++SQ +F+N L+ E+ LV+ +
Sbjct: 449 NAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSLTPVEQQFLVNAM 500
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LT+ G PI D+ + L AG +GP LL+DF + +I HFD ER+PER VHA+GAG
Sbjct: 54 LTSDVGGPIQDQTS-LKAGIRGPTLLEDFMFRQKIQHFDHERVPERAVHARGAG 106
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 98 QDWDMFWDFI-SLRPESTHQ------DWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F D I S++P ++ D WDF S +P + H S GIP YRH
Sbjct: 182 QDAIQFPDLIHSVKPRPDNEIPQAATAHDSAWDFFSQQPSTMHTLFWAMSGHGIPRSYRH 241
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
M+G+G HTF+ V +G + K+H+K R+
Sbjct: 242 MDGFGVHTFRFVKDDGSSKLIKWHFKSRQ 270
>pdb|3EJ6|A Chain A, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|B Chain B, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|C Chain C, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|D Chain D, Neurospora Crassa Catalase-3 Crystal Structure
Length = 688
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 15/170 (8%)
Query: 331 PHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDT-- 388
P PL +G++ L++NP NYFAE EQI+F P H+V G++ + D +LQGRL+SY DT
Sbjct: 304 PEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTEDPLLQGRLYSYLDTQL 363
Query: 389 HRHRLGPNYLQLPVNCPFATKVANYQRDGP----MAFNNQGGAPNYFPNSFSGPQESERG 444
+RHR GPN+ QLP+N P + V N RDG + N +P+Y + G
Sbjct: 364 NRHR-GPNFEQLPINRP-VSGVHNNHRDGQGQAWIHKNIHHYSPSYLNKGYPAQANQTVG 421
Query: 445 RLSTFAVSGDVA------RYNSSDEDNFSQCTMFWNILSQDERDRLVDNI 488
R F G A +++ +D+++Q +F+N L+ E+ +++ I
Sbjct: 422 R-GFFTTPGRTASGVLNRELSATFDDHYTQPRLFFNSLTPVEQQFVINAI 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 119 DMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVR 178
D WDF S +P + H S GIP YRHM+G+G HTF+LV +GK+ K+H+K +
Sbjct: 180 DSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTK 239
Query: 179 K 179
+
Sbjct: 240 Q 240
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 231 NPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
N +TT G I+++ + L AG +G LL+DF + ++ HFD ERIPERVVHA+GAG
Sbjct: 20 NGQFMTTDFGGNIEEQFS-LKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAG 76
>pdb|1YE9|A Chain A, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|B Chain B, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|C Chain C, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|D Chain D, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|I Chain I, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|J Chain J, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|K Chain K, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|L Chain L, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 226
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 98 QDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRH 150
QD F DF+ +++PE D FWD++SL+PE+ H M SDRGIP YR
Sbjct: 135 QDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRT 194
Query: 151 MNGYGSHTFKLVNAEGKAVYCKFHYK 176
M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 195 MEGFGIHTFRLINAEGKATFVRFHWK 220
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT G I D N L AG +GP LL+DF ++I+HFD ERIPER+VHA+G+
Sbjct: 5 ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSA 59
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFI-SLRPE------STHQDWDMFWDFISLRPESTH 52
DLV + P+ ++D F DF+ +++PE D FWD++SL+PE+ H
Sbjct: 122 FDLVGNN---TPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 177
>pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine
pdb|3VAQ|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine
pdb|4DC3|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
2- Fluoroadenosine
pdb|4DC3|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
2- Fluoroadenosine
Length = 372
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 246 KNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPE-RVVHAKGAGELFLLSLSYDYRKGKE 304
K V+ K P+L D + EI F E+ + +++ GAG+ F DY +GK
Sbjct: 279 KRLVIITRGKNPLLYTDSSD-SEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP 337
Query: 305 FLLSLHYRKGAAPFTNYSSIF 325
+ SLH AA + S F
Sbjct: 338 MITSLHAAVKAAAYIICRSGF 358
>pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine In Occluded Loop Conformation
pdb|3VAS|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine In Occluded Loop Conformation
Length = 370
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 246 KNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPE-RVVHAKGAGELFLLSLSYDYRKGKE 304
K V+ K P+L D + EI F E+ + +++ GAG+ F DY +GK
Sbjct: 277 KRLVIITRGKNPLLYTDSSD-SEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP 335
Query: 305 FLLSLHYRKGAAPFTNYSSIF 325
+ SLH AA + S F
Sbjct: 336 MITSLHAAVKAAAYIICRSGF 356
>pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine And Amp
pdb|3UQ6|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine And Amp
pdb|3UQ9|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Tubercidin
pdb|3UQ9|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Tubercidin
Length = 372
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 246 KNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPE-RVVHAKGAGELFLLSLSYDYRKGKE 304
K V+ K P+L D + EI F E+ + +++ GAG+ F DY +GK
Sbjct: 279 KRLVIITRGKNPLLYTDSSD-SEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP 337
Query: 305 FLLSLHYRKGAAPFTNYSSIF 325
+ SLH AA + S F
Sbjct: 338 MITSLHAAVKAAAYIICRSGF 358
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 280 RVVHAKGAGELFLLSLSYDYRKGKEFLLSLHYRKGAAPFTNYSSIFCHQVWPHREF---- 335
R+V G G L L DYRKG + + + KG + SI +V +E
Sbjct: 388 RLVKEWGVG----LGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNA 443
Query: 336 ------PLIEVGQLVLDKNPSN 351
LI VG+L+ D SN
Sbjct: 444 VVDGGSSLISVGKLIDDITGSN 465
>pdb|2RR7|A Chain A, Microtubule Binding Domain Of Dynein-C
Length = 155
Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 237 TATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVV 282
TA+G +DD A K +L +F++LD + FD++ IP V+
Sbjct: 62 TASGRMVDD---YWEASKK---MLMEFDFLDSLRKFDKDHIPPEVI 101
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 59/163 (36%), Gaps = 31/163 (19%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYL---------DEISHFDRERIPERVVHAK 285
L AT P D K N P DF ++ DE++ + RVV
Sbjct: 20 LMEATSIPFDGKKNCWVPDP-------DFGFVGAEIQSTKGDEVTVKTDKTQETRVVKKD 72
Query: 286 GAG-------ELFLLSLSYDYRKGKEFLLSLHYRKGAAPFTNYSSIFCHQVWPHREFPLI 338
G E+ + + + L +L R + YS +FC + P+R P+
Sbjct: 73 DIGQRNPPKFEMNMDMANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIY 132
Query: 339 EVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGR 381
G ++DK AE+ P HL + + MLQ R
Sbjct: 133 TQG--LVDKYRGKRRAEM------PPHLFSIADNAYQYMLQDR 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,140,172
Number of Sequences: 62578
Number of extensions: 769348
Number of successful extensions: 1950
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1388
Number of HSP's gapped (non-prelim): 406
length of query: 504
length of database: 14,973,337
effective HSP length: 103
effective length of query: 401
effective length of database: 8,527,803
effective search space: 3419649003
effective search space used: 3419649003
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)