RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2590
(504 letters)
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 226 bits (577), Expect = 1e-68
Identities = 106/178 (59%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 326 CHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSY 385
+VWPH+++PLI VG+LVL++NP NYFAEVEQIAF PS++ PGIE SPDKMLQGRLF+Y
Sbjct: 295 LTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAY 354
Query: 386 PDTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAF-NNQGGAPNYFPNSFSGPQESERG 444
PDTHRHRLGPNYL +PVNCP+ +VANYQRDGPM +NQGGAPNY+PNSF P++
Sbjct: 355 PDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSA 414
Query: 445 RLSTFAVSGDVARYNSSDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQY 501
+ SG+V R+N++++DN +Q F+ N+L++++R RL +NI G LK+A IQ
Sbjct: 415 LEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQK 472
Score = 108 bits (271), Expect = 6e-26
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 210 PEKNQSEDQESAGEEGGRFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEI 269
P +Q + + R Q D LTT GNP+ DK NV+T GP+GP+L+QD + DE+
Sbjct: 3 PASDQMQHWKEQ-----RAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEM 57
Query: 270 SHFDRERIPERVVHAKGAG 288
+HFDRERIPERVVHAKGAG
Sbjct: 58 AHFDRERIPERVVHAKGAG 76
Score = 101 bits (252), Expect = 2e-23
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 93 PESTHQDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYR 149
P +D +F FI + P++ +D DM WDF SLRPES HQ LFSDRGIPDG+R
Sbjct: 147 PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHR 206
Query: 150 HMNGYGSHTFKLVNAEGKAVYCKFHYK 176
HMNGYGSHTFKLVNA G+AVYCKFHYK
Sbjct: 207 HMNGYGSHTFKLVNANGEAVYCKFHYK 233
Score = 44.5 bits (105), Expect = 2e-05
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQ 35
+ SQ KRNP THLKD DM WDF SLRPES HQ
Sbjct: 158 PSFIHSQ-KRNPQTHLKDPDMVWDFWSLRPESLHQ 191
Score = 39.1 bits (91), Expect = 0.001
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + P+ ++D +F FI + P++ +D DM WDF SLRPES HQ
Sbjct: 139 WDLVGNNT---PIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQ 191
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId:
1351]}
Length = 474
Score = 224 bits (573), Expect = 3e-68
Identities = 84/186 (45%), Positives = 117/186 (62%), Gaps = 9/186 (4%)
Query: 326 CHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSY 385
+ +E+PLIEVG + L++NP NYFAEVEQ+ FSP + VPGIE SPDK+LQGRLF+Y
Sbjct: 275 VTKTVSQKEYPLIEVGTMTLNRNPENYFAEVEQVTFSPGNFVPGIEASPDKLLQGRLFAY 334
Query: 386 PDTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFS-GPQESERG 444
D HRHR+G N QLP+N A V NYQ+DG M FNN NY PNS++ P+E
Sbjct: 335 GDAHRHRVGANSHQLPINQAKA-PVNNYQKDGNMRFNNGNSEINYEPNSYTETPKEDPTA 393
Query: 445 RLSTFAVSGDVARYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNAND------L 498
++S+F V G+V Y S ++D+F+Q +N+L +E++ L++NI +L +
Sbjct: 394 KISSFEVEGNVGNY-SYNQDHFTQANALYNLLPSEEKENLINNIAASLGQVKNQEIIARQ 452
Query: 499 IQYLYN 504
I
Sbjct: 453 IDLFTR 458
Score = 101 bits (252), Expect = 2e-23
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 235 LTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTT+ G+P+ D N LTAG GPVL+QD + L++++HF+RER+PERVVHAKGAG
Sbjct: 3 LTTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAG 56
Score = 98.0 bits (244), Expect = 2e-22
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 93 PESTHQDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYR 149
P +D F DFI + P + + + WDF S PES HQ IL SDRGIP +R
Sbjct: 127 PIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSDRGIPLSFR 186
Query: 150 HMNGYGSHTFKLVNAEGKAVYCKFHYK 176
HM+G+GSHTFK VNA G+ + K+H+K
Sbjct: 187 HMHGFGSHTFKWVNAAGEVFFVKYHFK 213
Score = 42.2 bits (99), Expect = 1e-04
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
KRNP THLK + WDF S PES HQ
Sbjct: 144 QKRNPRTHLKSPEAVWDFWSHSPESLHQ 171
Score = 36.4 bits (84), Expect = 0.007
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + P+ ++D F DFI + P + + + WDF S PES HQ
Sbjct: 119 YDLVGNN---TPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQ 171
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
Length = 476
Score = 221 bits (565), Expect = 4e-67
Identities = 82/177 (46%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 326 CHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSY 385
+VWPH ++PL++VG L++NP NYF++VEQ AFSP+++VPGI SPDKMLQGRLFSY
Sbjct: 275 LTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSY 334
Query: 386 PDTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFN-NQGGAPNYFPNSFSGPQESERG 444
D HR+RLG N+ Q+PVN P NY RDG M + N G Y PNS QE
Sbjct: 335 GDAHRYRLGVNHHQIPVNAPKCP-FHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDF 393
Query: 445 RLSTFAVSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNANDLIQ 500
+ ++ G +N DED FSQ + +LS DE R+ I G L A+ Q
Sbjct: 394 KEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQASKETQ 450
Score = 101 bits (254), Expect = 7e-24
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 234 TLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
LTTA G P+ D NNV+TAGP+GP+LLQD +L++++HFDRE IPER +HAKG+G
Sbjct: 2 KLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSG 56
Score = 97.3 bits (242), Expect = 3e-22
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 93 PESTHQDWDMFWDFISL---RPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYR 149
P +D F D + P + ++ WDF S PES HQ I SDRG+P YR
Sbjct: 127 PVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYR 186
Query: 150 HMNGYGSHTFKLVNAEGKAVYCKFHYK 176
++G+GSHT+ +N + + + KFH++
Sbjct: 187 FVHGFGSHTYSFINKDNERFWVKFHFR 213
Score = 42.6 bits (100), Expect = 8e-05
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQ 35
DL KR+P T++++ WDF S PES HQ
Sbjct: 138 PDLNHIV-KRDPRTNMRNMAYKWDFFSHLPESLHQ 171
Score = 36.4 bits (84), Expect = 0.008
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISL---RPESTHQDWDMFWDFISLRPESTHQ 53
D+V + PV +L+D F D + P + ++ WDF S PES HQ
Sbjct: 119 WDMVGNN---TPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQ 171
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId: 317]}
Length = 484
Score = 211 bits (538), Expect = 4e-63
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 331 PHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDTHR 390
+ P ++GQ+VL+KN N+F E EQ+A +P++LVPGIEPS D++LQGR+FSY DT
Sbjct: 278 IWPDVPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQM 337
Query: 391 HRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRLSTFA 450
+RLG N L LPVN P V N +DG + + NY P+ ++ R S
Sbjct: 338 YRLGANGLSLPVNQPKV-AVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELP 396
Query: 451 VSGDVARYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNANDLIQY 501
+SG + + E NF Q + S E+ LV +L + +
Sbjct: 397 LSGTTQQAKITREQNFKQAGDLYRSYSAKEKTDLVQKFGESLADTLTESKN 447
Score = 105 bits (263), Expect = 5e-25
Identities = 33/56 (58%), Positives = 38/56 (67%)
Query: 233 DTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
DTLT G + D N TAG +GPVLLQD L ++ FDRERIPERVVHA+G G
Sbjct: 2 DTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTG 57
Score = 97.7 bits (243), Expect = 2e-22
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 93 PESTHQDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYR 149
P +D F D + P + + +DF S PE+T +L+S+ G P GYR
Sbjct: 127 PTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYR 186
Query: 150 HMNGYGSHTFKLVNAEGKAVYCKFHYK 176
M+G G H +KLVNA+G+ Y KFH+K
Sbjct: 187 FMDGNGVHAYKLVNAKGEVHYVKFHWK 213
Score = 43.0 bits (101), Expect = 7e-05
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLRPESTHQ 35
D+V + K +P T+L + +DF S PE+T
Sbjct: 138 PDMVHAF-KPDPRTNLDNDSRRFDFFSHVPEATRT 171
Score = 38.7 bits (90), Expect = 0.001
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + P ++D F D + P + + +DF S PE+T
Sbjct: 119 WDLVGNNF---PTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRT 171
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId: 210]}
Length = 491
Score = 209 bits (534), Expect = 2e-62
Identities = 76/191 (39%), Positives = 109/191 (57%), Gaps = 14/191 (7%)
Query: 327 HQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYP 386
++W +++PL+EVG + L+KNP NYFAEVEQ AF+P+++VPGI SPD+MLQGRLFSY
Sbjct: 281 TKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYG 340
Query: 387 DTHRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRL 446
DTHR+RLG NY Q+PVN P + RDG M G NY P+S G +E + R
Sbjct: 341 DTHRYRLGVNYPQIPVNKPRCP-FHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARD 399
Query: 447 STFAVSGDVA-------RYNSSDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNANDL- 498
F ++ Y + D D ++Q ++ L DE++RL D I +L +
Sbjct: 400 PKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKE 459
Query: 499 -----IQYLYN 504
+++
Sbjct: 460 IVDKQLEHFKK 470
Score = 103 bits (257), Expect = 4e-24
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 229 VQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
V TTA G P+ D NNV+TAGP+GPVLLQ +L++++ FDRERIPERVVHAKG+G
Sbjct: 2 VNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSG 61
Score = 100 bits (249), Expect = 3e-23
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 93 PESTHQDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYR 149
P +D F DFI + P++ + DM WDF S PES +Q + SDRGIP +R
Sbjct: 132 PVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFR 191
Query: 150 HMNGYGSHTFKLVNAEGKAVYCKFHYK 176
HM+G+GSHTF L+NA+G+ + KFH+
Sbjct: 192 HMDGFGSHTFSLINAKGERFWVKFHFH 218
Score = 46.1 bits (109), Expect = 7e-06
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
KR+P T+L + DM WDF S PES +Q
Sbjct: 149 QKRDPQTNLPNHDMVWDFWSNVPESLYQ 176
Score = 42.2 bits (99), Expect = 1e-04
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISLR---PESTHQDWDMFWDFISLRPESTHQ 53
DLV + PV ++D F DFI + P++ + DM WDF S PES +Q
Sbjct: 124 WDLVGNNT---PVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQ 176
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus [TaxId:
1270]}
Length = 498
Score = 204 bits (521), Expect = 2e-60
Identities = 67/178 (37%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 329 VWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPDT 388
+++P I+VG L L++NP N+FA++E AFSPS+ VPGI SPD+ML GR F+Y D
Sbjct: 282 TISQKDYPRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDA 341
Query: 389 HRHRLGPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSGPQESERGRL-S 447
+R+G + QLPVN P V NY +G M +++ G Y PNS E G +
Sbjct: 342 QLYRVGAHVNQLPVNRPKNA-VHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDD 400
Query: 448 TFAVSGDVARYNS---SDEDNFSQCTMFW-NILSQDERDRLVDNIVGALKNANDLIQY 501
+ G + R +D+D+F Q + S ERD V+ + GALK +Q
Sbjct: 401 GWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQA 458
Score = 102 bits (255), Expect = 6e-24
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 231 NPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
+ T G P LT G +GP++L D + L+ HF+R IPER HAKG+G
Sbjct: 4 HATGSTRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSG 61
Score = 96.6 bits (240), Expect = 6e-22
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 98 QDWDMFWDFISL---RPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGY 154
+D F FI P+S +D M WDF + PES HQ L RG+P +R MNGY
Sbjct: 136 RDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGY 195
Query: 155 GSHTFKLVNAEGKAVYCKFHYK 176
GSHT+ VNA+G+ + K+H+
Sbjct: 196 GSHTYLWVNAQGEKHWVKYHFI 217
Score = 43.0 bits (101), Expect = 7e-05
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQ 35
KR P + L+D M WDF + PES HQ
Sbjct: 148 QKRLPDSGLRDATMQWDFWTNNPESAHQ 175
Score = 37.2 bits (86), Expect = 0.004
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 12 PVTHLKDWDMFWDFISL---RPESTHQDWDMFWDFISLRPESTHQ 53
P+ L+D F FI P+S +D M WDF + PES HQ
Sbjct: 131 PIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQ 175
Score = 34.2 bits (78), Expect = 0.038
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 35 QDWDMFWDFISL---RPESTHQDWDMFWDFISLRPESTHQ 71
+D F FI P+S +D M WDF + PES HQ
Sbjct: 136 RDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQ 175
>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII
[TaxId: 562]}
Length = 571
Score = 201 bits (513), Expect = 1e-58
Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
++ P P+ VG++VL++NP N+FAE EQ AF P H+VPG++ + D +LQGRLFSY D
Sbjct: 332 KLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTD 391
Query: 388 THRHRL-GPNYLQLPVNCPFATKVANYQRDGPMAFNNQGGAPNYFPNSFSG------PQE 440
T RL GPN+ ++P+N P N+QRDG NY PNS + P
Sbjct: 392 TQISRLGGPNFHEIPINRPTCP-YHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPG 450
Query: 441 SERGRLSTFA--VSGDVARYNS-SDEDNFSQCTMFWNILSQDERDRLVDNIVGALKNAND 497
+RG ++ V G+ R S S + +S +FW + E+ +VD L
Sbjct: 451 PKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVR 510
Query: 498 ------LIQYLYN 504
++ L +
Sbjct: 511 PYIRERVVDQLAH 523
Score = 104 bits (261), Expect = 2e-24
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 209 TPEKNQSEDQESAGEEGGRFVQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDE 268
EK S + G E LTT G I D N L AG +GP LL+DF ++
Sbjct: 35 RNEKLNSLEDVRKGSEN-------YALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREK 87
Query: 269 ISHFDRERIPERVVHAKGAG 288
I+HFD ERIPER+VHA+G+
Sbjct: 88 ITHFDHERIPERIVHARGSA 107
Score = 97.7 bits (243), Expect = 3e-22
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 93 PESTHQDWDMFWDFISLRPESTHQ-------DWDMFWDFISLRPESTHQTMILFSDRGIP 145
P QD F DF+ H D FWD++SL+PE+ H M SDRGIP
Sbjct: 178 PIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIP 237
Query: 146 DGYRHMNGYGSHTFKLVNAEGKAVYCKFHYK 176
YR M G+G HTF+L+NAEGKA + +FH+K
Sbjct: 238 RSYRTMEGFGIHTFRLINAEGKATFVRFHWK 268
Score = 39.6 bits (92), Expect = 0.001
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 1 MDLVASQVKRNPVTHLKD----WDMFWDFISLRPESTHQ 35
D V + K P + D FWD++SL+PE+ H
Sbjct: 189 PDFVHAV-KPEPHWAIPQGQSAHDTFWDYVSLQPETLHN 226
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 488
Score = 199 bits (506), Expect = 2e-58
Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKMLQGRLFSYPD 387
+VWP +FPL VG++VL++NP N+FA+VEQ AF+PS VP E S D +LQ RLFSY D
Sbjct: 284 KVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYAD 343
Query: 388 THRHRLGPNYLQLPVNCPFATKVAN-YQRDGPMAFN-NQGGAPNYFPNSFSG--PQESER 443
HR+RLGPN+ Q+PVNCP+A+K N RDGPM N N G P Y N S Q+
Sbjct: 344 AHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRP 403
Query: 444 GRLSTFAVSGDVARYN---SSDEDNFSQCTMFWNILSQD--ERDRLVDNIVGALKNANDL 498
+ +G Y+ S + +F Q + +L + ++ L NI ++ A
Sbjct: 404 IQQHQEVWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQKNLAYNIGIHVEGACPQ 463
Query: 499 IQ 500
IQ
Sbjct: 464 IQ 465
Score = 104 bits (260), Expect = 1e-24
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 229 VQNPDTLTTATGNPIDDKNNVLTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
V+ +T +TGNPI++ G GP+LLQD+N +D ++HF+RE IP+R HA G+G
Sbjct: 2 VREDRVVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSG 61
Score = 94.6 bits (235), Expect = 2e-21
Identities = 42/140 (30%), Positives = 51/140 (36%), Gaps = 41/140 (29%)
Query: 44 ISLRPESTHQDWDM-------FWDFISLRPESTHQKRNPVTHLKDWDMFWDFISLRPEST 96
E + DW D QKRNP T+L+D DMFWDF++
Sbjct: 115 TKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPEN-- 172
Query: 97 HQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGS 156
+ HQ MILFSDRG P YR M+GY
Sbjct: 173 --------------------------------QVAIHQVMILFSDRGTPANYRSMHGYSG 200
Query: 157 HTFKLVNAEGKAVYCKFHYK 176
HT+K N G Y + H K
Sbjct: 201 HTYKWSNKNGDWHYVQVHIK 220
Score = 38.4 bits (89), Expect = 0.002
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 8 VKRNPVTHLKDWDMFWDFISL--RPESTHQ 35
KRNP T+L+D DMFWDF++ + HQ
Sbjct: 149 QKRNPQTNLRDADMFWDFLTTPENQVAIHQ 178
Score = 31.4 bits (71), Expect = 0.28
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 1 MDLVASQVKRNPVTHLKDWDMFWDFISL---RPESTHQDWDMFWDFISL--RPESTHQ 53
+D V + PV ++D F FI P++ +D DMFWDF++ + HQ
Sbjct: 124 LDWVYNNT---PVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQ 178
Score = 28.4 bits (63), Expect = 2.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 30 PESTHQDWDMFWDFISL---RPESTHQDWDMFWDFISL--RPESTHQ 71
P +D F FI P++ +D DMFWDF++ + HQ
Sbjct: 132 PVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQ 178
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein,
N-terminal domain {Black sea rod (Plexaura homomalla)
[TaxId: 47982]}
Length = 366
Score = 93.1 bits (231), Expect = 3e-21
Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 328 QVWPHREFPLIEVGQLVLDKNPSNYFAEVEQIAFSPSHLVPGIEPSPDKM-------LQG 380
+W P ++ ++ + S +E+ AF+ ++ + K +
Sbjct: 289 ILWDKETHPWFDLAKVSIKTPLSP--DVLEKTAFNIANQPASLGLLEAKSPEDYNSIGEL 346
Query: 381 RLFSYPDTHRHRLGPN 396
R+ Y R
Sbjct: 347 RVAVYTWVQHLRKLKI 362
Score = 90.8 bits (225), Expect = 2e-20
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 103 FWDFISLRPESTH-QDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKL 161
FW+ SL + ++ D +++ P + + + R PD + H+ Y T
Sbjct: 142 FWNSPSL-EDFVPVEEGDAAEEYVYKNPYYYYNLV--EALRRAPDTFAHLYYYSQVTMPF 198
Query: 162 VNAEGKAVYCKFHYK 176
+GK YC++
Sbjct: 199 KAKDGKVRYCRYRAL 213
Score = 36.9 bits (85), Expect = 0.004
Identities = 5/39 (12%), Positives = 10/39 (25%)
Query: 250 LTAGPKGPVLLQDFNYLDEISHFDRERIPERVVHAKGAG 288
+ L+ + + + R H G G
Sbjct: 32 SPVFGGLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTG 70
Score = 31.1 bits (70), Expect = 0.34
Identities = 4/45 (8%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 12 PVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWD 56
+ DF+ + ++ D +++ P + +
Sbjct: 138 EANIFWNSPSLEDFVPV------EEGDAAEEYVYKNPYYYYNLVE 176
Score = 26.9 bits (59), Expect = 5.8
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 40 FWDFISLRPESTH-QDWDMFWDFISLRPESTHQ 71
FW+ SL + ++ D +++ P +
Sbjct: 142 FWNSPSL-EDFVPVEEGDAAEEYVYKNPYYYYN 173
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain
{Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Length = 382
Score = 33.5 bits (75), Expect = 0.052
Identities = 18/190 (9%), Positives = 49/190 (25%)
Query: 8 VKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPE 67
+ + V + F L+ + D F+ +++ +++ F + P+
Sbjct: 116 IILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPK 175
Query: 68 STHQKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISL 127
+ +L D FW + ++ F +
Sbjct: 176 LRTENPEVKEYLFDVARFWMEQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEI 235
Query: 128 RPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRKRHQKRQNT 187
+++ M D + +R T ++ A + ++ +
Sbjct: 236 WHDASGWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWN 295
Query: 188 SLCECGAASH 197
L
Sbjct: 296 LLDSHDTERF 305
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId:
562]}
Length = 288
Score = 32.1 bits (72), Expect = 0.15
Identities = 17/115 (14%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 249 VLTAGPKGPVLLQDFNYL----DEISHFDRERIPERVVHAKGAGELFLLSLSYDYRKGKE 304
++ + F L DE H R + + G G++ L +G
Sbjct: 180 LVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGAT 239
Query: 305 FLLSLHYRKGAAPFTNYSSIFCHQVWPHREFPLIEVGQLVLDKNPSNYFAEVEQI 359
+L + A Y + + E ++ + P +YF ++
Sbjct: 240 LQEALEHVTAAV----YEIMVTTKAMQEYELQVVAAQDRI--AKPEHYF-SATKL 287
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia
coli [TaxId: 562]}
Length = 305
Score = 31.6 bits (70), Expect = 0.21
Identities = 12/198 (6%), Positives = 39/198 (19%), Gaps = 1/198 (0%)
Query: 33 THQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPVTHLKDWDMFWDFISLR 92
+H D + L + + + D + + +
Sbjct: 63 SHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIG 122
Query: 93 PESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMN 152
D L + + + + +
Sbjct: 123 AGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGK 182
Query: 153 GYGSHTFKLVNAEGKAVYCKFHYKVRKRHQKRQNTSLCECGAASHKRLLYFSRMIITPEK 212
+ +N + + + A +++ + + IT E
Sbjct: 183 TITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDL-AKGVDVMVHEATLDITMEA 241
Query: 213 NQSEDQESAGEEGGRFVQ 230
+ S+ + +
Sbjct: 242 KANSRGHSSTRQAATLAR 259
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii
[TaxId: 5811]}
Length = 350
Score = 30.5 bits (67), Expect = 0.45
Identities = 26/254 (10%), Positives = 56/254 (22%), Gaps = 12/254 (4%)
Query: 60 DFISLRPESTHQKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWD 119
D + K T + + +
Sbjct: 88 DPRGQVLKELCDKEGLATRFMVAPGQSTGVC-----AVLINEKERTLCTHLGACGSFRLP 142
Query: 120 MFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRK 179
W + + T + +G + + +
Sbjct: 143 EDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQ 202
Query: 180 RHQKRQNTSLCECGAASHKRLLYFSRMIITPEKNQSEDQESAGEEGGRFVQNPDTLTTAT 239
N + + +++ ++ + E L TA
Sbjct: 203 SLLLHTNILFGN-----EEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAG 257
Query: 240 GNPIDDKNNVLTAGPKGPVLL-QDFNYLDEISHFDRERIP-ERVVHAKGAGELFLLSLSY 297
N K V+T G + Q + + + E++V GAG+ F+ Y
Sbjct: 258 QNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLY 317
Query: 298 DYRKGKEFLLSLHY 311
+GK +
Sbjct: 318 ALSQGKTVKQCIMC 331
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus
subtilis [TaxId: 1423]}
Length = 307
Score = 30.1 bits (66), Expect = 0.61
Identities = 10/77 (12%), Positives = 17/77 (22%)
Query: 51 THQDWDMFWDFISLRPESTHQKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLR 110
TH D + L + Q + FI T +
Sbjct: 62 THMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIE 121
Query: 111 PESTHQDWDMFWDFISL 127
+D +S+
Sbjct: 122 EGIVFEDDQFIVTAVSV 138
Score = 27.8 bits (60), Expect = 2.8
Identities = 14/151 (9%), Positives = 31/151 (20%), Gaps = 5/151 (3%)
Query: 33 THQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPVTHLKDWDMFWDFISLR 92
TH D + L + Q + + + + +
Sbjct: 62 THMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIE 121
Query: 93 PESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIPDGYRHMN 152
+D +S+ H + + + +L P
Sbjct: 122 EGIVFEDDQFIVTAVSVI----HGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKI 177
Query: 153 GYGSH-TFKLVNAEGKAVYCKFHYKVRKRHQ 182
G T + + + K R
Sbjct: 178 KKGETVTLEDGRIINGNDFLEPPKKGRSVVF 208
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE
{Enterococcus faecalis [TaxId: 1351]}
Length = 127
Score = 27.8 bits (61), Expect = 1.5
Identities = 8/110 (7%), Positives = 29/110 (26%), Gaps = 10/110 (9%)
Query: 60 DFISLRPESTHQKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWD 119
+F+S+ T + ++ Q+ + + +D
Sbjct: 10 EFVSIVANQTVRS---AMYVLKNQADMAETIYYVYVVDQENHLVGVI-------SLRDLI 59
Query: 120 MFWDFISLRPESTHQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAV 169
+ D + + + + D + + Y + + + +
Sbjct: 60 VNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLL 109
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum
vulgare), AMY1 isozyme [TaxId: 4513]}
Length = 347
Score = 28.0 bits (61), Expect = 2.5
Identities = 13/135 (9%), Positives = 29/135 (21%), Gaps = 1/135 (0%)
Query: 19 WDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPVTH 78
D+ + + + + +F S D +
Sbjct: 87 ADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAA 146
Query: 79 LKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFW-DFISLRPESTHQTMI 137
D D D + + F + R + +I S +
Sbjct: 147 APDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEV 206
Query: 138 LFSDRGIPDGYRHMN 152
+ DG + +
Sbjct: 207 WDNMATGGDGKPNYD 221
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase
{Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis) [TaxId: 228]}
Length = 354
Score = 27.9 bits (61), Expect = 2.8
Identities = 10/110 (9%), Positives = 28/110 (25%), Gaps = 1/110 (0%)
Query: 18 DWDMFWDFISLRPESTHQDWDM-FWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPV 76
+ F P+ H+ + D+ + R + + D + + +
Sbjct: 101 NSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYI 160
Query: 77 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFIS 126
L+ + D ++ P + D + +
Sbjct: 161 NDLQAIGVKGFRFDASKHVAASDIQSLMAKVNGSPVVFQEVIDQGGEAVG 210
Score = 26.8 bits (58), Expect = 6.8
Identities = 6/113 (5%), Positives = 23/113 (20%)
Query: 18 DWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKRNPVT 77
+ + + D + + + + + +
Sbjct: 95 GTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQN 154
Query: 78 HLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPE 130
+ + I ++ + I + +F + I E
Sbjct: 155 TIAAYINDLQAIGVKGFRFDASKHVAASDIQSLMAKVNGSPVVFQEVIDQGGE 207
>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus
[TaxId: 5724]}
Length = 146
Score = 27.0 bits (59), Expect = 3.2
Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 70 HQKRNPVTHLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRP 129
Q + + D R + +D I D + D S++P
Sbjct: 46 GQSPDTRSQKVCKSNGVDISKQRARQITKADFSKFDVI------AALDQSILSDINSMKP 99
Query: 130 ESTHQTMILFSD-RGIPDGYRHMNGYGSHTFKLVNAEGKA 168
+ ++LF+ G+ D Y +G+ F ++ E K
Sbjct: 100 SNCRAKVVLFNPPNGVDDPYYSSDGF-PTMFASISKEMKP 138
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale
cress (Arabidopsis thaliana), mitochondrial isoform
[TaxId: 3702]}
Length = 270
Score = 27.7 bits (60), Expect = 3.6
Identities = 13/159 (8%), Positives = 28/159 (17%), Gaps = 5/159 (3%)
Query: 18 DWDMFWDFI----SLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKR 73
+ W + T D M + + Q F+
Sbjct: 17 GVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDE 76
Query: 74 NPVTHLKDWDMFWDFISLRPESTHQDWDMFW-DFISLRPESTHQDWDMFWDFISLRPEST 132
+ K F + + +D + + + +
Sbjct: 77 ALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQL 136
Query: 133 HQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYC 171
L +N H +G
Sbjct: 137 ICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAA 175
>d1pgja1 a.100.1.1 (A:179-478) 6-phosphogluconate dehydrogenase
(6PGD) {Trypanosoma brucei [TaxId: 5691]}
Length = 300
Score = 27.0 bits (59), Expect = 5.0
Identities = 6/98 (6%), Positives = 22/98 (22%), Gaps = 28/98 (28%)
Query: 101 DMFWDFISLRPESTHQDWDMFWDFISLRPESTHQTMILFSDRGIP-----------DGYR 149
+ P ++ + + ++ S +
Sbjct: 202 KPMTEAFEKNPNISNLMCAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASLNYVTAMF 261
Query: 150 H------------MNGYGSHTFKLVNAEGKAVYCKFHY 175
+ +G H ++ V+ +G + +
Sbjct: 262 TPTLKYGQLVSLQRDVFGRHGYERVDKDG-----RESF 294
>d2hevf1 b.22.1.1 (F:58-183) Tumor necrosis factor ligand
superfamily member 4, OX40L {Human (Homo sapiens)
[TaxId: 9606]}
Length = 126
Score = 26.0 bits (57), Expect = 6.8
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
Query: 290 LFLLSLSYDYRKG---KEFLLSLHYRKGAAPF 318
+L+SL KG +E +SLHY+K P
Sbjct: 43 FYLISL-----KGYFSQEVDISLHYQKDEEPL 69
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA
methyltransferase {Rhodobacter sphaeroides [TaxId:
1063]}
Length = 279
Score = 26.6 bits (57), Expect = 7.9
Identities = 17/169 (10%), Positives = 41/169 (24%), Gaps = 4/169 (2%)
Query: 14 THLKDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQKR 73
L DWD D+I + + S+ + + S S
Sbjct: 35 IMLADWDDHMDYIGWAKRWLAEAERVLSPTGSI---AIFGGLQYQGEAGSGDLISIISHM 91
Query: 74 NPVTHLK-DWDMFWDFISLRPESTHQDWDMFWDFISLRPESTHQDWDMFWDFISLRPEST 132
+ + + W++ + + + D D + ++
Sbjct: 92 RQNSKMLLANLIIWNYPNGMSAQRFFANRHEEIAWFAKTKKYFFDLDAVREPYDEETKAA 151
Query: 133 HQTMILFSDRGIPDGYRHMNGYGSHTFKLVNAEGKAVYCKFHYKVRKRH 181
+ + + G N + + E + V +R
Sbjct: 152 YMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGHPTQKPAAVIERL 200
>d2fmma1 b.34.13.2 (A:108-175) Heterochromatin protein 1, HP1 {Mouse
(Mus musculus), HP1 beta (MOD1, M31) [TaxId: 10090]}
Length = 68
Score = 24.2 bits (53), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 272 FDRERIPERVVHA-KGAGELFLL 293
F R PER++ A +GEL L
Sbjct: 6 FARGLEPERIIGATDSSGELMFL 28
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.440
Gapped
Lambda K H
0.267 0.0479 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,024,022
Number of extensions: 98349
Number of successful extensions: 360
Number of sequences better than 10.0: 1
Number of HSP's gapped: 311
Number of HSP's successfully gapped: 99
Length of query: 504
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 415
Effective length of database: 1,185,626
Effective search space: 492034790
Effective search space used: 492034790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.6 bits)