BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2593
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32392|ARP3_DROME Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=2
SV=3
Length = 418
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 55/60 (91%)
Query: 35 SSGCFYFYPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
++G YPVRHGLVEDWDLMERF EQC+FKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 69 ATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
ERE+GIPPEQSLETAKAIKE++ YICPDIAKEFAKYD +PGKW+R
Sbjct: 210 EREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIR 254
>sp|Q61WW9|ARP3_CAEBR Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3
SV=1
Length = 426
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 53/53 (100%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+RHG+VEDWDLMER++EQCIFKYLRAEPEDH+FLLTEPPLNTPENREYTAE
Sbjct: 84 YPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAE 136
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
ERE IP EQS E AK IKE++ Y+CPD+ KEF KYD D KW+R
Sbjct: 218 EREHTIPAEQSYEVAKTIKEKFCYVCPDVMKEFVKYDTDSSKWLR 262
>sp|Q9N4I0|ARP3_CAEEL Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=3
SV=1
Length = 425
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 53/53 (100%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+RHG+VEDWDLMER++EQCIFKYLRAEPEDH+FLLTEPPLNTPENREYTAE
Sbjct: 83 YPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAE 135
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
+RE IP EQS E AK IKE++ Y+CPD+ KEF KYD D KW+R
Sbjct: 217 DREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLR 261
>sp|Q4V7C7|ARP3_RAT Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D KW+++
Sbjct: 210 DREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|Q5R8R1|ARP3_PONAB Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D KW+++
Sbjct: 210 DREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|Q99JY9|ARP3_MOUSE Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D KW+++
Sbjct: 210 DREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|P61158|ARP3_HUMAN Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D KW+++
Sbjct: 210 DREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|P61157|ARP3_BOVIN Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D KW+++
Sbjct: 210 DREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|Q90WD0|ARP3_CHICK Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1
Length = 418
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
ERE+GIPPEQSLETAKA+KER+SY+CPD+ KEF KYD D KW+++
Sbjct: 210 EREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNKYDTDGTKWIKQ 255
>sp|O73723|ARP3_TAKRU Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1
Length = 418
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ IFKYLRAEPEDHYFLLTEPPLNTPENREYTAE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 88 NREYTAEREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
++ ERE+GIPPEQSLETAKA+KER+SY+CPD+ KEF KYD D KW+++
Sbjct: 204 TQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNKYDTDGSKWIKQ 255
>sp|Q641P0|ARP3B_MOUSE Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1
Length = 418
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG+VEDWDLMERF EQ +FKYLRAEPEDHYFL+TEPPLNTPENREY AE
Sbjct: 76 WPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAE 128
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
ERE+GIPPEQSLETAKAIKE+Y YICPDI +EFAKYD DP KW+++
Sbjct: 210 EREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQ 255
>sp|Q9P1U1|ARP3B_HUMAN Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=2 SV=1
Length = 418
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
+P+RHG++EDWDLMERF EQ +FKYLRAEPEDHYFL+TEPPLNTPENREY AE
Sbjct: 76 WPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAE 128
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
ERE+GIPPEQSLETAKAIKE+Y YICPDI KEFAKYD DP KW+++
Sbjct: 210 EREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQ 255
>sp|P47117|ARP3_YEAST Actin-related protein 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARP3 PE=1 SV=1
Length = 449
Score = 99.4 bits (246), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 45/53 (84%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+RHG VE+WD MERF+E IFKYLR EPEDH+FLLTEPPLN PENRE AE
Sbjct: 114 YPIRHGQVENWDHMERFWENSIFKYLRTEPEDHFFLLTEPPLNPPENREQVAE 166
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 102 EQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
+ SL TA+ IK+ Y Y+CPDI KEF K+D DP K+ +
Sbjct: 253 DTSLRTAEKIKQEYCYVCPDIVKEFNKFDKDPSKFAQ 289
>sp|P78712|ARP3_NEUCR Actin-related protein 3 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=arp-3
PE=2 SV=2
Length = 439
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/53 (75%), Positives = 45/53 (84%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+RHG +E+WD MERF+ IFKYLR EPEDH+FLLTEPPLN PENRE TAE
Sbjct: 101 YPIRHGQIENWDHMERFWSNSIFKYLRVEPEDHHFLLTEPPLNPPENRENTAE 153
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 101 PEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
P+ SL+TA+ IKE Y Y+CPDI KEFAKYD D ++++
Sbjct: 239 PDSSLKTAQEIKEEYCYVCPDIVKEFAKYDRDRSRFLK 276
>sp|P32390|ARP3_SCHPO Actin-related protein 3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=act2 PE=1 SV=1
Length = 427
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 35 SSGCFYFYPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
S+G YP+RHG +E+WD MERF++Q +FKYLR EPEDHYFLLTEPPLN PENRE TAE
Sbjct: 85 SAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAE 144
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 101 PEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
P+ SL+TA+ IKE Y+CPDI KEF+++D +P ++++
Sbjct: 230 PDSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLK 267
>sp|Q9SAF1|ARP3_ARATH Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1
Length = 427
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+ HG VEDWD MER+++QCIF YLR +PEDHYFLLTE PL PE+REYT E
Sbjct: 88 YPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGE 140
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
ER IPPE S + A+ +KE Y Y C DI KEF K+D +P K++++
Sbjct: 219 ERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQ 264
>sp|P53490|ARP3_ACACA Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2
SV=1
Length = 427
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 46/52 (88%)
Query: 43 PVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
PVRHG VE+W ME+F+E CIFKYLR EPEDH+FLLTEPPLN PENREYTAE
Sbjct: 85 PVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAE 136
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
ER IPP ++LE AK IKE +SY+CPDI KEF KYD +P KW +
Sbjct: 218 ERNEKIPPAETLEVAKRIKETFSYVCPDIVKEFKKYDTEPDKWFK 262
>sp|P42528|ARP3_DICDI Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1
SV=1
Length = 418
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 43 PVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
PV+HG +E+W ME+++E C+FKYLR EPEDHYFLLTEPPLN PENRE+TAE
Sbjct: 78 PVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENREFTAE 129
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 94 EREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
ERE IPP +SLE AK +KE+YSY+CPDI KEF KYD++P KW++
Sbjct: 210 EREPNIPPAESLEIAKRVKEQYSYVCPDIVKEFGKYDSEPDKWIK 254
>sp|Q6K908|ARP3_ORYSJ Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3
PE=2 SV=1
Length = 428
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+ +G VE+WD MERF++QCIF YLR +PEDHYFLLTE PL PE REYT E
Sbjct: 89 YPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGE 141
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 89 REYTAEREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
++ ER IPPE+S + A+ +KE Y Y C DI KEF K+D +P K+++
Sbjct: 215 QQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIK 264
>sp|A2X6S3|ARP3_ORYSI Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2
SV=2
Length = 428
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+ +G VE+WD MERF++QCIF YLR +PEDHYFLLTE PL PE REYT E
Sbjct: 89 YPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGE 141
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 89 REYTAEREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMR 138
++ ER IPPE+S + A+ +KE Y Y C DI KEF K+D +P K+++
Sbjct: 215 QQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIK 264
>sp|Q9C0K3|ARP3C_HUMAN Actin-related protein 3C OS=Homo sapiens GN=ACTR3C PE=2 SV=1
Length = 210
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 89 REYTAEREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRK 139
++ ERE+GIPPEQSLETAKAIKE+Y YICPDI KEFAKYD DP KW+++
Sbjct: 76 QQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPQKWIKQ 126
>sp|P51775|ACT_GIAIN Actin OS=Giardia intestinalis PE=3 SV=1
Length = 375
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG ++DWD+ME+ + C F LRA+P DH LLTE P N NRE
Sbjct: 69 YPIEHGQIKDWDMMEKVWHHCYFNELRAQPSDHAVLLTEAPKNPKANRE 117
>sp|P53469|ACT2_OXYTR Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=1
Length = 375
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 KNSSAHRRENIDRDCSGQWRWCHPCHSSGCF-YFYPVRHGLVEDWDLMERFFEQCIFKYL 67
KN SA I D + ++ G FYP+ HG+V+DWD ME+ + + L
Sbjct: 38 KNVSAL----IGVDSASEYLGDEAQQKRGVLKIFYPIEHGIVKDWDDMEKIWNHTFYVEL 93
Query: 68 RAEPEDHYFLLTEPPLNTPENRE 90
R +P++H LLTE PLN NRE
Sbjct: 94 RVQPDEHPILLTEAPLNPKTNRE 116
>sp|P53468|ACT1_OXYTR Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=1
Length = 375
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 KNSSAHRRENIDRDCSGQWRWCHPCHSSGCF-YFYPVRHGLVEDWDLMERFFEQCIFKYL 67
KN SA I D + ++ G FYP+ HG+V+DWD ME+ + + L
Sbjct: 38 KNVSAL----IGVDSASEYLGDEAQQKRGVLKIFYPIEHGIVKDWDDMEKIWNHTFYVEL 93
Query: 68 RAEPEDHYFLLTEPPLNTPENRE 90
R +P++H LLTE PLN NRE
Sbjct: 94 RVQPDEHPILLTEAPLNPKTNRE 116
>sp|O00937|ACT_HISCA Actin OS=Histriculus cavicola PE=3 SV=2
Length = 375
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 9 KNSSAHRRENIDRDCSGQWRWCHPCHSSGCF-YFYPVRHGLVEDWDLMERFFEQCIFKYL 67
KN SA I D + ++ G FYP+ HG+V+DWD ME+ + + L
Sbjct: 38 KNVSAL----IGVDSASEYLGDEAQQKRGVLKIFYPIEHGIVKDWDDMEKIWNHTFYVEL 93
Query: 68 RAEPEDHYFLLTEPPLNTPENRE 90
R P++H LLTE PLN NRE
Sbjct: 94 RVSPDEHPVLLTEAPLNPKVNRE 116
>sp|Q96481|ACT4_SOLLC Actin-105 (Fragment) OS=Solanum lycopersicum PE=3 SV=1
Length = 336
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+RHG+V++WD ME+ + + LR PED LLTE PLN NRE
Sbjct: 51 YPIRHGIVDNWDDMEKIWHHTFYNELRVAPEDDSILLTEAPLNPKANRE 99
>sp|P12715|ACT1_OXYNO Actin, cytoplasmic OS=Oxytricha nova PE=3 SV=1
Length = 375
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 KNSSAHRRENIDRDCSGQWRWCHPCHSSGCF-YFYPVRHGLVEDWDLMERFFEQCIFKYL 67
KN SA I D + ++ G FYP+ HG+++DW+ ME+ + + L
Sbjct: 38 KNVSAL----IGVDSASEYIGDEAQQKRGVLKIFYPIEHGIIKDWEDMEKIWNHTFYVEL 93
Query: 68 RAEPEDHYFLLTEPPLNTPENRE 90
R +P++H LLTE PLN NRE
Sbjct: 94 RVQPDEHPVLLTEAPLNPKTNRE 116
>sp|P55805|ACT2_OXYNO Actin, cytoplasmic OS=Oxytricha nova GN=MIC-ACT-1 PE=3 SV=1
Length = 375
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 KNSSAHRRENIDRDCSGQWRWCHPCHSSGCF-YFYPVRHGLVEDWDLMERFFEQCIFKYL 67
KN SA I D + ++ G FYP+ HG+++DW+ ME+ + + L
Sbjct: 38 KNVSAL----IGVDSASEYIGDEAQQKRGVLKIFYPIEHGIIKDWEDMEKIWNHTFYVEL 93
Query: 68 RAEPEDHYFLLTEPPLNTPENRE 90
R +P++H LLTE PLN NRE
Sbjct: 94 RVQPDEHPVLLTEAPLNPKTNRE 116
>sp|P20904|ACT_VOLCA Actin OS=Volvox carteri PE=3 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + F LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANRE 119
>sp|P53498|ACT_CHLRE Actin OS=Chlamydomonas reinhardtii PE=2 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + F LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANRE 119
>sp|P10988|ACT1_PLAFO Actin-1 OS=Plasmodium falciparum (isolate NF54) PE=2 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LRA PE+H LLTE PLN NRE
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRE 118
>sp|P86287|ACT1_PLAFX Actin-1 OS=Plasmodium falciparum (isolate HB3) PE=1 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LRA PE+H LLTE PLN NRE
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRE 118
>sp|Q8I4X0|ACT1_PLAF7 Actin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PFL2215w PE=3
SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LRA PE+H LLTE PLN NRE
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRE 118
>sp|Q7RME1|ACT1_PLAYO Actin-1 OS=Plasmodium yoelii yoelii GN=PY02240 PE=3 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LRA PE+H LLTE PLN NRE
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRE 118
>sp|P93374|ACT2_TOBAC Actin-53 (Fragment) OS=Nicotiana tabacum PE=3 SV=1
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 94
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE E
Sbjct: 51 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPLLLTEAPLNPKANREKMTE 103
>sp|P27132|ACT2_NAEFO Actin-2 (Fragment) OS=Naegleria fowleri PE=2 SV=1
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 37 GCFYF-YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
G F YP++HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 59 GILIFKYPIQHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 113
>sp|Q4YU79|ACT2_PLABA Actin-2 OS=Plasmodium berghei (strain Anka) GN=PB001050.02.0 PE=3
SV=1
Length = 376
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + F LR PE+H LLTE PLN NRE
Sbjct: 69 YPIEHGIVTNWDDMEKIWRHTFFNELRVSPEEHPVLLTEAPLNPKTNRE 117
>sp|Q7RPB4|ACT2_PLAYO Actin-2 OS=Plasmodium yoelii yoelii GN=PY01545 PE=3 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + F LR PE+H LLTE PLN NRE
Sbjct: 69 YPIEHGIVTNWDDMEKIWRHTFFNELRVSPEEHPVLLTEAPLNPKTNRE 117
>sp|Q8RYC2|ACT5_ARATH Putative actin-5 OS=Arabidopsis thaliana GN=ACT5 PE=5 SV=1
Length = 378
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR EPE+H LLTE PLN NRE
Sbjct: 72 YPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNRE 120
>sp|P48465|ACT_CRYNH Actin OS=Cryptococcus neoformans var. grubii serotype A (strain H99
/ ATCC 208821 / CBS 10515 / FGSC 9487) GN=CNAG_00483
PE=3 SV=2
Length = 375
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN +NRE
Sbjct: 69 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKQNRE 117
>sp|P53500|ACT_CYAME Actin OS=Cyanidioschyzon merolae PE=3 SV=1
Length = 377
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PEDH LLTE PLN NRE
Sbjct: 70 YPIEHGIVTNWDDMEKIWYHTFYNELRISPEDHPVLLTEAPLNPKANRE 118
>sp|A3C6D7|ACT2_ORYSJ Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
>sp|P0C539|ACT2_ORYSI Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
>sp|P30171|ACT11_SOLTU Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1
Length = 377
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
>sp|P93584|ACT9_SOLTU Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1
Length = 336
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 51 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 99
>sp|P0CJ47|ACT3_ARATH Actin-3 OS=Arabidopsis thaliana GN=ACT3 PE=1 SV=1
Length = 377
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
>sp|P0CJ46|ACT1_ARATH Actin-1 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=1
Length = 377
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
>sp|P81228|ACT5_SOLTU Actin-66 (Fragment) OS=Solanum tuberosum PE=3 SV=1
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 51 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 99
>sp|P30164|ACT1_PEA Actin-1 OS=Pisum sativum PE=2 SV=1
Length = 376
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 70 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
>sp|P53496|ACT11_ARATH Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1
Length = 377
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 42 YPVRHGLVEDWDLMERFFEQCIFKYLRAEPEDHYFLLTEPPLNTPENRE 90
YP+ HG+V +WD ME+ + + LR PE+H LLTE PLN NRE
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,334,351
Number of Sequences: 539616
Number of extensions: 2274534
Number of successful extensions: 5684
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 5157
Number of HSP's gapped (non-prelim): 542
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)