BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2594
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32392|ARP3_DROME Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=2
SV=3
Length = 418
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/84 (90%), Positives = 79/84 (94%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRDIKR VD RL++SE LS G IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTKAAYEEYGPSICRHNPVFGTMT
Sbjct: 395 HTKAAYEEYGPSICRHNPVFGTMT 418
>sp|Q9P1U1|ARP3B_HUMAN Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=2 SV=1
Length = 418
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 79/84 (94%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KRVVDARL+LSE LSGG IKPKP++VQV+THHMQRYAVWFGGSMLASTPEF++VC
Sbjct: 335 LQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEEYGPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEYGPSICRHNPVFGVMS 418
>sp|Q90WD0|ARP3_CHICK Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1
Length = 418
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|Q4V7C7|ARP3_RAT Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1
Length = 418
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|Q99JY9|ARP3_MOUSE Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3
Length = 418
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|Q5R8R1|ARP3_PONAB Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3
Length = 418
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|P61158|ARP3_HUMAN Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3
Length = 418
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|P61157|ARP3_BOVIN Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3
Length = 418
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLKLSE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|Q641P0|ARP3B_MOUSE Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1
Length = 418
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 79/84 (94%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KRVVDARLKLS+ LSGG IKPKP++VQV+THHMQRYAVWFGGSMLASTPEF++VC
Sbjct: 335 LQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEEYGPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEYGPSICRHNPVFGVMS 418
>sp|O73723|ARP3_TAKRU Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1
Length = 418
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 77/84 (91%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VDARLK+SE LSGG +KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY+VC
Sbjct: 335 LQRDLKRTVDARLKMSEELSGGKLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK YEE GPSICRHNPVFG M+
Sbjct: 395 HTKKDYEEIGPSICRHNPVFGVMS 418
>sp|Q61WW9|ARP3_CAEBR Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3
SV=1
Length = 426
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 75/84 (89%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR+ DARL++SETLSGG +KPKPIDVQVI+H MQRYAVWFGGSMLAST EFY+V
Sbjct: 343 LQRDVKRLSDARLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVS 402
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
H+KA Y E GPSICR+NPVFG +T
Sbjct: 403 HSKAEYMEKGPSICRYNPVFGALT 426
>sp|Q9N4I0|ARP3_CAEEL Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=3
SV=1
Length = 425
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 74/84 (88%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR+ D RL++SETLSGG +KPKPIDVQVI+H MQRYAVWFGGSMLAST EFY+V
Sbjct: 342 LQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVS 401
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTKA Y E GPSICR+NPVFG +T
Sbjct: 402 HTKAEYMERGPSICRYNPVFGALT 425
>sp|P53490|ARP3_ACACA Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2
SV=1
Length = 427
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 72/84 (85%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRDIKR VD R+K SE LS G IK K +DV+VI+HHMQR+AVWFGGSMLASTPEFY+VC
Sbjct: 343 LQRDIKRAVDYRIKRSEELSQGRIKSKAVDVKVISHHMQRFAVWFGGSMLASTPEFYKVC 402
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTK Y+E GPSICRHNPVFG MT
Sbjct: 403 HTKQQYDEVGPSICRHNPVFGAMT 426
>sp|P42528|ARP3_DICDI Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1
SV=1
Length = 418
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 67/84 (79%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR VD R+K SE LSGG IK P+ V VI+H+MQRYAVWFGGSMLASTPEFY VC
Sbjct: 335 LQRDVKRSVDYRIKRSEELSGGKIKAVPLAVNVISHNMQRYAVWFGGSMLASTPEFYNVC 394
Query: 94 HTKAAYEEYGPSICRHNPVFGTMT 117
HTKA Y+E GPSICR N V G +
Sbjct: 395 HTKAQYDEIGPSICRFNTVIGGIN 418
>sp|Q6K908|ARP3_ORYSJ Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3
PE=2 SV=1
Length = 428
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 65/83 (78%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+K++VDAR+ S GG K +PI+V V++H +QRYAVWFGGS+LAST EFYE C
Sbjct: 345 LQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEAC 404
Query: 94 HTKAAYEEYGPSICRHNPVFGTM 116
HTKA YEEYG SICR NPVF M
Sbjct: 405 HTKAEYEEYGASICRTNPVFKGM 427
>sp|A2X6S3|ARP3_ORYSI Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2
SV=2
Length = 428
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 65/83 (78%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+K++VDAR+ S GG K +PI+V V++H +QRYAVWFGGS+LAST EFYE C
Sbjct: 345 LQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEAC 404
Query: 94 HTKAAYEEYGPSICRHNPVFGTM 116
HTKA YEEYG SICR NPVF M
Sbjct: 405 HTKAEYEEYGASICRTNPVFKGM 427
>sp|Q9SAF1|ARP3_ARATH Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1
Length = 427
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+K++VDAR+ + +GG I +P++V V++H +QR+AVWFGGS+L+STPEF+ C
Sbjct: 344 LQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASC 403
Query: 94 HTKAAYEEYGPSICRHNPVFGTM 116
TK YEEYG SICR NPVF M
Sbjct: 404 RTKEEYEEYGASICRTNPVFKGM 426
>sp|P32390|ARP3_SCHPO Actin-related protein 3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=act2 PE=1 SV=1
Length = 427
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+KR+VD R+ SE LSG K +DV VI+H QR AVWFGGS+LA TPEF C
Sbjct: 346 LQRDLKRIVDERIHRSEMLSGA--KSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYC 403
Query: 94 HTKAAYEEYGPSICRHNPVFGT 115
HTKA YEEYG SI R +FG
Sbjct: 404 HTKADYEEYGASIARRYQIFGN 425
>sp|P78712|ARP3_NEUCR Actin-related protein 3 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=arp-3
PE=2 SV=2
Length = 439
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRDIK++VD R+K SE SGG K +DVQVITH QR+ WFGGS+L TPEF C
Sbjct: 355 LQRDIKQLVDTRIKASEVRSGG-AKSGGLDVQVITHKRQRHGPWFGGSLLGQTPEFRSYC 413
Query: 94 HTKAAYEEYGPSICRHNPVFG 114
HTKA Y+EYGPSI R + G
Sbjct: 414 HTKAEYQEYGPSIVRRFALLG 434
>sp|P47117|ARP3_YEAST Actin-related protein 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARP3 PE=1 SV=1
Length = 449
Score = 92.8 bits (229), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 34 LQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVC 93
LQRD+K +V+ R+ SE LSG K +DV VI+H QR AVWFGGS+LA T EF C
Sbjct: 369 LQRDLKSIVNNRIAQSELLSG--TKSTGVDVSVISHRKQRNAVWFGGSLLAQTAEFKGYC 426
Query: 94 HTKAAYEEYGPSICRHNPVF 113
HTK YEEYGP I R+ +F
Sbjct: 427 HTKKDYEEYGPEIVRNFSLF 446
>sp|Q8LGE3|ARP6_ARATH Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1
Length = 421
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 47 KLSETLSGGY--IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGP 104
+L E L G + P DV++ T VW GGS+LAS+P+F +C TKA YEE G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 105 SICR 108
+ CR
Sbjct: 413 ARCR 416
>sp|P53500|ACT_CYAME Actin OS=Cyanidioschyzon merolae PE=3 SV=1
Length = 377
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++++ ++Y+VW GGS+LAS F ++ +KA Y+E+GPS+
Sbjct: 322 VAPSSVKIKLVAPAERKYSVWIGGSILASLSTFQQMWISKAEYDEFGPSVV 372
>sp|Q9UVZ8|ACT_CANDC Actin OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS
7987 / NCPF 3949 / NRRL Y-17841) GN=ACT1 PE=3 SV=1
Length = 376
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 321 LAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHH 373
>sp|P14235|ACT_CANAX Actin OS=Candida albicans GN=ACT1 PE=3 SV=1
Length = 376
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 321 LAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHH 373
>sp|P30165|ACT2_PEA Actin-2 OS=Pisum sativum PE=2 SV=1
Length = 376
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ +RY+VW GGS+LAS F ++ +KA Y+E GPSI
Sbjct: 321 LAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDERGPSIV 371
>sp|A5DQP9|ACT_PICGU Actin OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 /
DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=ACT1
PE=3 SV=1
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 305 LAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHH 357
>sp|O74258|ACT_PICAD Actin OS=Pichia angusta (strain ATCC 26012 / NRRL Y-7560 / DL-1)
GN=ACT PE=3 SV=2
Length = 376
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 321 LAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHH 373
>sp|P53483|ACTX_TAKRU Actin, alpha anomalous OS=Takifugu rubripes PE=2 SV=1
Length = 376
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSI 106
+ P + +Q+I ++Y+VW GGS+LAS F ++ +K YEE GPSI
Sbjct: 321 LAPSTMKIQIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYEEIGPSI 370
>sp|P07829|ACT3_DICDI Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3
Length = 376
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + +++I ++Y+VW GGS+LAS P F ++ +K Y+E GPSI
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLPTFQQMWISKEEYDESGPSIV 371
>sp|P60010|ACT_YEAST Actin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ACT1 PE=1 SV=1
Length = 375
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 320 LAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHH 372
>sp|P60011|ACT_SACBA Actin OS=Saccharomyces bayanus GN=ACT1 PE=3 SV=1
Length = 375
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 320 LAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHH 372
>sp|P60009|ACT_CANGA Actin OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 /
NBRC 0622 / NRRL Y-65) GN=ACT1 PE=3 SV=1
Length = 375
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 320 LAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHH 372
>sp|Q75D00|ACT_ASHGO Actin OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=ACT1 PE=2 SV=1
Length = 376
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRH 109
+ P + V++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI H
Sbjct: 321 LAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHH 373
>sp|P10993|ACT2_TETPY Actin, cytoplasmic OS=Tetrahymena pyriformis PE=3 SV=2
Length = 376
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 47 KLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSI 106
+LS+ +S + P + ++V+ +RY+VW GGS+L+S F + TKA Y+E GPSI
Sbjct: 313 RLSKEVSA--LAPSSMKIKVVAPPERRYSVWIGGSILSSLSTFQTMWITKAEYDESGPSI 370
>sp|Q554S6|ACT17_DICDI Actin-17 OS=Dictyostelium discoideum GN=act17 PE=3 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSI 106
+ P + +++I ++Y+VW GGSML+S F ++ +K Y+E GPSI
Sbjct: 319 LAPSTMKIKIIAPPERKYSVWIGGSMLSSLSTFQQMWISKEEYDESGPSI 368
>sp|P10992|ACT1_TETTH Actin, macronuclear OS=Tetrahymena thermophila PE=1 SV=3
Length = 376
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 47 KLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSI 106
+LS+ +S + P + ++V+ +RY+VW GGS+L+S F + TKA Y+E GPSI
Sbjct: 313 RLSKEVSA--LAPSSMKIKVVAPPERRYSVWIGGSILSSLSTFQTMWITKAEYDESGPSI 370
>sp|Q8SWN8|ACT_ENCCU Actin OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU01_0460 PE=1
SV=2
Length = 375
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P I + V+ ++Y+VW GGS+LAS F ++ +KA Y+E+GPSI
Sbjct: 320 LAPPVIKIGVVAPPERKYSVWIGGSILASLSTFQQMWVSKAEYQEHGPSIV 370
>sp|P30164|ACT1_PEA Actin-1 OS=Pisum sativum PE=2 SV=1
Length = 376
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ +KA Y+E GPSI
Sbjct: 321 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIV 371
>sp|P30161|ACT_COSCS Actin (Fragment) OS=Costaria costata PE=3 SV=2
Length = 331
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ +KA Y+E GPSI
Sbjct: 276 LAPSTMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIV 326
>sp|O65314|ACT_SCHDU Actin OS=Scherffelia dubia PE=2 SV=1
Length = 378
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ KA Y+E GPSI
Sbjct: 323 VAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 373
>sp|P30173|ACT13_SOLTU Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1
Length = 377
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ TK Y+E GPSI
Sbjct: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIV 372
>sp|Q39758|ACT_FUCVE Actin OS=Fucus vesiculosus PE=2 SV=1
Length = 376
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ +KA Y+E GPSI
Sbjct: 321 LAPSTMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIV 371
>sp|P30172|ACT12_SOLTU Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1
Length = 357
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ TK Y+E GPSI
Sbjct: 302 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIV 352
>sp|P53502|ACT_FUCDI Actin OS=Fucus distichus PE=2 SV=1
Length = 375
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ +KA Y+E GPSI
Sbjct: 320 LAPSTMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPSIV 370
>sp|P53467|ACTM_MOLOC Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1
Length = 378
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + +++I ++Y+VW GGS+L+S F ++ TKA Y+E GPSI
Sbjct: 323 LAPSTMKIKIIAPPERKYSVWIGGSILSSLSTFNQMWITKAEYDEAGPSIV 373
>sp|P46258|ACT3_PEA Actin-3 OS=Pisum sativum PE=2 SV=1
Length = 377
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ KA Y+E GPSI
Sbjct: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
>sp|P53494|ACT4_ARATH Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1
Length = 377
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ KA Y+E GPSI
Sbjct: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
>sp|P41339|ACTA_LIMPO Actin, acrosomal process isoform OS=Limulus polyphemus PE=2 SV=1
Length = 376
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 55 GYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSI 106
G + P + +++I ++Y+VW GGS+LAS F ++ +K Y+E GPSI
Sbjct: 319 GALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>sp|P30171|ACT11_SOLTU Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1
Length = 377
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ KA Y+E GPSI
Sbjct: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
>sp|P30167|ACT3_SOLTU Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1
Length = 377
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 57 IKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSIC 107
+ P + ++V+ ++Y+VW GGS+LAS F ++ KA Y+E GPSI
Sbjct: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,993,974
Number of Sequences: 539616
Number of extensions: 1721982
Number of successful extensions: 3606
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3168
Number of HSP's gapped (non-prelim): 446
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)