Query psy2594
Match_columns 117
No_of_seqs 147 out of 1091
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 20:09:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 4.5E-33 1.5E-37 220.6 3.6 113 2-116 305-426 (427)
2 3qb0_A Actin-related protein 4 100.0 1.1E-30 3.7E-35 210.5 3.7 93 2-111 392-497 (498)
3 1k8k_A ARP3, actin-like protei 100.0 5.8E-30 2E-34 200.3 7.2 115 2-116 294-417 (418)
4 4fo0_A Actin-related protein 8 100.0 4.5E-30 1.5E-34 208.2 5.1 102 1-113 477-591 (593)
5 2fxu_A Alpha-actin-1, actin, a 99.9 7.8E-27 2.7E-31 180.8 5.7 94 2-111 272-374 (375)
6 1k8k_B ARP2, actin-like protei 99.9 8.8E-27 3E-31 181.9 3.9 103 2-109 276-388 (394)
7 4am6_A Actin-like protein ARP8 99.8 1.2E-19 4.2E-24 149.3 4.6 110 2-114 475-654 (655)
8 1jce_A ROD shape-determining p 98.3 2.6E-07 9E-12 69.8 2.3 64 3-90 256-330 (344)
9 3h1q_A Ethanolamine utilizatio 98.0 2.7E-06 9.1E-11 62.1 2.5 58 3-84 212-272 (272)
10 1dkg_D Molecular chaperone DNA 97.9 5.2E-06 1.8E-10 63.4 3.2 60 3-86 315-381 (383)
11 3qfu_A 78 kDa glucose-regulate 97.6 1.1E-05 3.9E-10 61.5 0.4 60 3-85 325-391 (394)
12 2v7y_A Chaperone protein DNAK; 97.3 6.3E-05 2.1E-09 60.1 1.9 59 3-85 284-349 (509)
13 3i33_A Heat shock-related 70 k 97.2 9.8E-05 3.3E-09 56.6 1.3 60 4-86 334-400 (404)
14 1yuw_A Heat shock cognate 71 k 96.0 0.0021 7E-08 51.9 1.4 58 5-85 314-378 (554)
15 2kho_A Heat shock protein 70; 96.0 0.0024 8.2E-08 52.1 1.8 58 4-85 316-380 (605)
16 3d2f_A Heat shock protein homo 95.0 0.011 3.7E-07 49.0 2.6 58 4-85 317-381 (675)
17 4gni_A Putative heat shock pro 94.9 0.0071 2.4E-07 46.4 1.0 62 4-87 327-401 (409)
18 2ych_A Competence protein PILM 91.9 0.046 1.6E-06 41.2 1.1 37 4-40 287-332 (377)
19 4ehu_A Activator of 2-hydroxyi 90.6 0.25 8.4E-06 35.7 3.8 42 20-85 212-253 (276)
20 4b9q_A Chaperone protein DNAK; 89.8 0.13 4.6E-06 41.8 2.0 34 5-38 317-357 (605)
21 4a2a_A Cell division protein F 89.2 0.2 6.9E-06 39.0 2.6 37 4-40 305-354 (419)
22 2ews_A Pantothenate kinase; PA 81.7 3.2 0.00011 30.9 5.7 44 20-84 242-286 (287)
23 4db3_A Glcnac kinase, N-acetyl 73.4 3.8 0.00013 30.3 4.1 65 5-84 258-324 (327)
24 1hux_A Activator of (R)-2-hydr 72.2 1.7 5.9E-05 31.5 1.9 59 3-85 194-255 (270)
25 2gup_A ROK family protein; sug 72.1 5.9 0.0002 28.4 4.8 68 5-84 216-285 (292)
26 2aa4_A Mannac kinase, putative 65.3 4.2 0.00014 29.1 2.7 63 5-84 222-286 (289)
27 2zgy_A Plasmid segregation pro 64.2 4.6 0.00016 29.6 2.8 57 5-84 260-319 (320)
28 3r8e_A Hypothetical sugar kina 64.2 4 0.00014 30.0 2.5 66 5-84 249-317 (321)
29 4htl_A Beta-glucoside kinase; 59.2 9.9 0.00034 27.5 3.9 63 5-85 226-290 (297)
30 3epq_A Putative fructokinase; 57.5 12 0.0004 27.4 4.0 72 4-85 212-288 (302)
31 2qm1_A Glucokinase; alpha-beta 52.0 8.4 0.00029 27.9 2.4 67 5-85 251-320 (326)
32 2hoe_A N-acetylglucosamine kin 51.7 19 0.00066 26.9 4.5 65 5-85 303-370 (380)
33 3vov_A Glucokinase, hexokinase 49.4 13 0.00046 26.9 3.2 65 5-85 226-294 (302)
34 4apw_A ALP12; actin-like prote 47.4 14 0.00047 27.4 3.0 54 6-85 263-323 (329)
35 1saz_A Probable butyrate kinas 46.5 34 0.0011 25.8 5.1 86 4-109 281-376 (381)
36 3vgl_A Glucokinase; ROK family 45.6 24 0.00082 25.7 4.1 67 5-85 241-311 (321)
37 3htv_A D-allose kinase, alloki 45.2 20 0.0007 26.1 3.6 72 7-91 230-304 (310)
38 2yhx_A Hexokinase B; transfera 44.8 52 0.0018 25.8 6.1 52 20-86 389-442 (457)
39 3qbx_A Anhydro-N-acetylmuramic 43.1 9.6 0.00033 29.5 1.6 34 5-38 270-307 (371)
40 1bdg_A Hexokinase; phosphotran 41.2 31 0.0011 26.9 4.3 60 8-86 382-446 (451)
41 3cqy_A Anhydro-N-acetylmuramic 41.2 10 0.00034 29.3 1.4 34 5-38 277-313 (370)
42 2ap1_A Putative regulator prot 40.7 9.5 0.00032 27.8 1.2 22 63-84 303-324 (327)
43 2jsh_A Appetite-regulating hor 40.2 4.4 0.00015 19.4 -0.5 15 91-105 8-22 (26)
44 2yhw_A Bifunctional UDP-N-acet 39.6 46 0.0016 24.3 4.8 37 4-41 272-309 (343)
45 2i7n_A Pantothenate kinase 1; 38.9 37 0.0013 26.0 4.3 49 18-84 308-358 (360)
46 2lc0_A Putative uncharacterize 34.2 4.8 0.00016 26.6 -1.2 73 29-108 35-107 (132)
47 2ch5_A NAGK protein; transfera 32.6 45 0.0015 24.2 3.8 65 4-84 245-322 (347)
48 1ghh_A DINI, DNA-damage-induci 32.1 64 0.0022 19.3 3.8 22 25-46 11-33 (81)
49 3eno_A Putative O-sialoglycopr 30.5 38 0.0013 25.2 3.1 35 6-40 239-275 (334)
50 2q2r_A Glucokinase 1, putative 29.6 40 0.0014 25.0 3.1 37 5-41 293-334 (373)
51 1yrv_A Ubiquitin-conjugating l 29.1 82 0.0028 21.1 4.4 24 20-43 14-37 (169)
52 2r0j_A Ubiquitin carrier prote 27.5 41 0.0014 22.0 2.5 14 29-42 1-14 (149)
53 2fsj_A Hypothetical protein TA 27.4 7.1 0.00024 29.2 -1.5 17 69-85 327-343 (346)
54 2kp7_A Crossover junction endo 25.6 88 0.003 18.7 3.6 35 8-42 43-82 (87)
55 2e2o_A Hexokinase; acetate and 25.2 49 0.0017 23.5 2.8 13 73-85 274-286 (299)
56 1abz_A Alpha-T-alpha, ATA; de 24.5 52 0.0018 16.6 2.0 13 30-42 4-16 (40)
57 2ivn_A O-sialoglycoprotein end 24.2 53 0.0018 24.2 2.9 21 20-40 250-270 (330)
58 3js6_A Uncharacterized PARM pr 22.5 12 0.00041 28.2 -1.0 16 70-85 320-335 (355)
59 2ygw_A Malonyl-COA decarboxyla 22.1 2.7 9.2E-05 33.5 -4.8 55 7-82 256-312 (460)
60 3f9m_A Glucokinase; hexokinase 21.4 1.2E+02 0.0041 24.0 4.5 47 20-86 413-460 (470)
61 1z6r_A MLC protein; transcript 20.1 70 0.0024 23.9 2.9 66 5-84 323-391 (406)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.5e-33 Score=220.56 Aligned_cols=113 Identities=47% Similarity=0.720 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHhcCCCce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCc
Q psy2594 2 PPLVATRLKWLLNCPDEA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQ 72 (117)
Q Consensus 2 ~gl~~~i~~si~~cp~d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 72 (117)
+||+++|.+||++||+|+ |+||+|+||||.+||++||+.+++.+++.+....+. .|..++|+|.++++|
T Consensus 305 ~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~--~p~~~~vkv~~~~~r 382 (427)
T 3dwl_A 305 TPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGA--KSGGVDVNVISHKRQ 382 (427)
T ss_dssp SCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC---------------CCCCCEECCTTC
T ss_pred CCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhcccccccccc--CCCceeEEEecCCcc
Confidence 689999999999999997 999999999999999999999986544322221111 256778999999999
Q ss_pred ccchhhhhhhhcCCcccccceecHHHHhhhCCceEEecCCCCCC
Q psy2594 73 RYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRHNPVFGTM 116 (117)
Q Consensus 73 ~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~~~~~~~~~f~~~ 116 (117)
.|++|+||||||+++.|+++||||+||+|+|++++|+++.|++.
T Consensus 383 ~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~~~~~ 426 (427)
T 3dwl_A 383 RNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQIFGNS 426 (427)
T ss_dssp TTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC----
T ss_pred ccceecCceeeccccchhheeEEHHHHhhhChHhheecccccCC
Confidence 99999999999999999999999999999999999999999874
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-30 Score=210.45 Aligned_cols=93 Identities=19% Similarity=0.335 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHhcCCCce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeC---
Q psy2594 2 PPLVATRLKWLLNCPDEA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITH--- 69 (117)
Q Consensus 2 ~gl~~~i~~si~~cp~d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--- 69 (117)
+||+++|++||++||+|+ |+||+|+||||.+||++||+.++ | .++|+|.++
T Consensus 392 ~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~----------------p-~~~i~v~~~~~~ 454 (498)
T 3qb0_A 392 IGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKIL----------------P-SLKFRILTTGHT 454 (498)
T ss_dssp CCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHS----------------T-TSCCCEECCSCT
T ss_pred CCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhC----------------C-CCeeEEEcCCCC
Confidence 799999999999999998 99999999999999999999984 5 678899987
Q ss_pred CCcccchhhhhhhhcCCcccccceecHHHHhhhCC-ceEEecC
Q psy2594 70 HMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGP-SICRHNP 111 (117)
Q Consensus 70 ~~~~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~-~~~~~~~ 111 (117)
++|.|++|+||||||+++.|+++||||+||+|+|+ +++++||
T Consensus 455 ~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 455 IERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp GGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred CccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 78999999999999999999999999999999999 8887765
No 3
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.96 E-value=5.8e-30 Score=200.28 Aligned_cols=115 Identities=68% Similarity=1.091 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHhcCCCce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCc
Q psy2594 2 PPLVATRLKWLLNCPDEA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQ 72 (117)
Q Consensus 2 ~gl~~~i~~si~~cp~d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 72 (117)
.||+++|.++|++||.|+ |+||+|++|||.+||++||..+++.+.+.++++.|....|...+|+|..+++|
T Consensus 294 ~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~ 373 (418)
T 1k8k_A 294 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQ 373 (418)
T ss_dssp CCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTC
T ss_pred CCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCcc
Confidence 589999999999999885 99999999999999999999998776655555555433466778999999999
Q ss_pred ccchhhhhhhhcCCcccccceecHHHHhhhCCceEEecCCCCCC
Q psy2594 73 RYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRHNPVFGTM 116 (117)
Q Consensus 73 ~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~~~~~~~~~f~~~ 116 (117)
.+++|+|||++|+++.|+++||||+||+|+|++++++|++|+..
T Consensus 374 ~~~~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~f~~~ 417 (418)
T 1k8k_A 374 RYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVM 417 (418)
T ss_dssp TTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCCCSCC
T ss_pred ccceeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhccccCC
Confidence 99999999999999999999999999999999999999999864
No 4
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.96 E-value=4.5e-30 Score=208.20 Aligned_cols=102 Identities=20% Similarity=0.275 Sum_probs=90.5
Q ss_pred CCCHHHHHHHHHhcCCC-ce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCC
Q psy2594 1 MPPLVATRLKWLLNCPD-EA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHH 70 (117)
Q Consensus 1 ~~gl~~~i~~si~~cp~-d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~ 70 (117)
+.||+++|++||.+||. |+ |+||+|+||||.+||++||+.++|...+. ...+|+|++++
T Consensus 477 ~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~-----------~~~~v~v~~~p 545 (593)
T 4fo0_A 477 ALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRR-----------IIENVDVITRP 545 (593)
T ss_dssp CCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHH-----------HSSCCEEESSG
T ss_pred CCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhcc-----------ccceEEEECCC
Confidence 36999999999999995 75 99999999999999999999997653321 12358899876
Q ss_pred ---CcccchhhhhhhhcCCcccccceecHHHHhhhCCceEEecCCC
Q psy2594 71 ---MQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRHNPVF 113 (117)
Q Consensus 71 ---~~~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~~~~~~~~~f 113 (117)
+|++++|+||||||+++.|+++||||+||+|+|++++++||.|
T Consensus 546 ~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~f 591 (593)
T 4fo0_A 546 KDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAAF 591 (593)
T ss_dssp GGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCSS
T ss_pred CCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCCc
Confidence 7999999999999999999999999999999999999999988
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=7.8e-27 Score=180.80 Aligned_cols=94 Identities=26% Similarity=0.492 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHhcCCCce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCc
Q psy2594 2 PPLVATRLKWLLNCPDEA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQ 72 (117)
Q Consensus 2 ~gl~~~i~~si~~cp~d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 72 (117)
+||+++|.++|++||.|+ |+||+|++|||.+||++||..++ |...+++|..+++|
T Consensus 272 ~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~----------------p~~~~v~v~~~~~p 335 (375)
T 2fxu_A 272 AGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPER 335 (375)
T ss_dssp CCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS----------------CTTCCCCEECCTTT
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC----------------CCCeeEEEEcCCCC
Confidence 689999999999999875 99999999999999999999884 55567888888999
Q ss_pred ccchhhhhhhhcCCcccccceecHHHHhhhCCceEEecC
Q psy2594 73 RYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICRHNP 111 (117)
Q Consensus 73 ~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~~~~~~~~ 111 (117)
.+++|+|||++|+++.|+++||||+||+|+|++++++||
T Consensus 336 ~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~ 374 (375)
T 2fxu_A 336 KYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC 374 (375)
T ss_dssp TSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC---
T ss_pred CccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhc
Confidence 999999999999999999999999999999999998764
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.93 E-value=8.8e-27 Score=181.94 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHhcCCCce---------eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCc
Q psy2594 2 PPLVATRLKWLLNCPDEA---------ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQ 72 (117)
Q Consensus 2 ~gl~~~i~~si~~cp~d~---------l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 72 (117)
+||+++|.++|++||.|+ |+||+|++|||.+||++||..++..+. ..+....|..++|+|..+++|
T Consensus 276 ~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~-----~~~~~~~p~~~~v~v~~~~~~ 350 (394)
T 1k8k_B 276 VGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERV-----LKGDVEKLSKFKIRIEDPPRR 350 (394)
T ss_dssp CCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHT-----CSSCCCTTCCCCC--------
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhh-----cccccCCCCceEEEEecCCCc
Confidence 589999999999999986 999999999999999999999863221 111112255668899989999
Q ss_pred ccchhhhhhhhcCCcccc-cceecHHHHhhhCCceEEe
Q psy2594 73 RYAVWFGGSMLASTPEFY-EVCHTKAAYEEYGPSICRH 109 (117)
Q Consensus 73 ~~~aW~Ggsila~l~~~~-~~~itr~eY~E~G~~~~~~ 109 (117)
.+++|+|||++|+++.|+ ++||||+||+|+|++++++
T Consensus 351 ~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 351 KHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp --------------------------------------
T ss_pred ceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 999999999999999999 9999999999999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.77 E-value=1.2e-19 Score=149.28 Aligned_cols=110 Identities=21% Similarity=0.214 Sum_probs=83.8
Q ss_pred CCHHHHHHHHHhc-CCC-ce-----------eecCCCCcccHHHHHHHHHHhh---------HHHhhhh-------h---
Q psy2594 2 PPLVATRLKWLLN-CPD-EA-----------ECTPNSKHRAKKTWLQRDIKRV---------VDARLKL-------S--- 49 (117)
Q Consensus 2 ~gl~~~i~~si~~-cp~-d~-----------l~GG~s~~~Gf~~RL~~EL~~~---------~~~~~~~-------~--- 49 (117)
-+|.++|++||.+ |.. |. |+||+++||||...|...|... ++.-++. .
T Consensus 475 ~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~ 554 (655)
T 4am6_A 475 APLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGH 554 (655)
T ss_dssp CCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHST
T ss_pred ccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhh
Confidence 3799999999994 533 65 8999999999998887777651 1110000 0
Q ss_pred -----------------------------------hhccCCCCCCCceeEEEEeCCCc---ccchhhhhhhhcCCccccc
Q psy2594 50 -----------------------------------ETLSGGYIKPKPIDVQVITHHMQ---RYAVWFGGSMLASTPEFYE 91 (117)
Q Consensus 50 -----------------------------------~~~~~~~~~~~~~~v~v~~~~~~---~~~aW~Ggsila~l~~~~~ 91 (117)
+...+ .....+|+|.++|++ ++++|+|||+||+++.|++
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e 631 (655)
T 4am6_A 555 YVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNG---NEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEE 631 (655)
T ss_dssp TCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTS---CCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHH
T ss_pred hccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccc---cCCceeeEEeCCccccCcceeEEecceeeeecccHhh
Confidence 00011 122356899999865 8999999999999999999
Q ss_pred ceecHHHHhhhCCceEEecCCCC
Q psy2594 92 VCHTKAAYEEYGPSICRHNPVFG 114 (117)
Q Consensus 92 ~~itr~eY~E~G~~~~~~~~~f~ 114 (117)
+||||+||+|.|++++++||+|.
T Consensus 632 ~wIt~~Eyde~G~~il~~k~~f~ 654 (655)
T 4am6_A 632 LFITNSDWDVHGSRILQYKCIFT 654 (655)
T ss_dssp HCEEHHHHHHHGGGGGGTSCSSC
T ss_pred eeecHHHHhhhcchheEeccccC
Confidence 99999999999999999999884
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.27 E-value=2.6e-07 Score=69.80 Aligned_cols=64 Identities=23% Similarity=0.143 Sum_probs=50.8
Q ss_pred CHHHHHHHHHhcCCCc---------e-eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCc
Q psy2594 3 PLVATRLKWLLNCPDE---------A-ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQ 72 (117)
Q Consensus 3 gl~~~i~~si~~cp~d---------~-l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 72 (117)
+|.+.|.++|.+|+.+ + |+||+|++|||.+||++++.. ++..+.+|
T Consensus 256 ~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~------------------------~v~~~~~p 311 (344)
T 1jce_A 256 AIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI------------------------SVIRSEEP 311 (344)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS------------------------CEEECSST
T ss_pred HHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC------------------------CccccCCh
Confidence 4778899999999742 2 999999999999999988731 13345678
Q ss_pred ccchhhhhhhhcCC-cccc
Q psy2594 73 RYAVWFGGSMLAST-PEFY 90 (117)
Q Consensus 73 ~~~aW~Ggsila~l-~~~~ 90 (117)
.+++|+|+++++.. +.|+
T Consensus 312 ~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 312 LTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp TTHHHHHHHHGGGCHHHHT
T ss_pred HHHHHHHHHHHHhChHHHH
Confidence 99999999999974 5453
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.98 E-value=2.7e-06 Score=62.08 Aligned_cols=58 Identities=7% Similarity=-0.054 Sum_probs=46.8
Q ss_pred CHHHHHHHHHhcCC-Cce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhh
Q psy2594 3 PLVATRLKWLLNCP-DEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFG 79 (117)
Q Consensus 3 gl~~~i~~si~~cp-~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~G 79 (117)
++.+.|.++|.+++ +|- |+||++++||+.++|++++.. .+..+++|.++.|+|
T Consensus 212 ~i~~~i~~~l~~~~~~~~ivL~GG~a~~~~l~~~l~~~l~~------------------------~v~~~~~p~~a~a~G 267 (272)
T 3h1q_A 212 KMALIVKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFLGK------------------------EVQVPIHPLLVTPLG 267 (272)
T ss_dssp HHHHHHHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHHSS------------------------CCBCCSSGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCccchhhHHHHHHHHhCC------------------------CccccCChHHHHHHH
Confidence 46778888899998 664 999999999999999988732 123356889999999
Q ss_pred hhhhc
Q psy2594 80 GSMLA 84 (117)
Q Consensus 80 gsila 84 (117)
++++|
T Consensus 268 aal~a 272 (272)
T 3h1q_A 268 IALFG 272 (272)
T ss_dssp HHTTC
T ss_pred HHhcC
Confidence 99865
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=97.92 E-value=5.2e-06 Score=63.42 Aligned_cols=60 Identities=7% Similarity=-0.086 Sum_probs=47.6
Q ss_pred CHHHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccc
Q psy2594 3 PLVATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYA 75 (117)
Q Consensus 3 gl~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~ 75 (117)
.+.+.|.++|.+++.+ + |+||+|++|++.++|++++.. .+..+.+|.++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~------------------------~v~~~~~p~~a 370 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK------------------------EPRKDVNPDEA 370 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSS------------------------CCBCSSCTTTH
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCC------------------------CCCCCcChHHH
Confidence 4677888999988642 2 999999999999999988732 12345678999
Q ss_pred hhhhhhhhcCC
Q psy2594 76 VWFGGSMLAST 86 (117)
Q Consensus 76 aW~Ggsila~l 86 (117)
+|+|++++|.+
T Consensus 371 va~Gaa~~a~~ 381 (383)
T 1dkg_D 371 VAIGAAVQGGV 381 (383)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.58 E-value=1.1e-05 Score=61.48 Aligned_cols=60 Identities=13% Similarity=0.025 Sum_probs=46.1
Q ss_pred CHHHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccc
Q psy2594 3 PLVATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYA 75 (117)
Q Consensus 3 gl~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~ 75 (117)
.+.+.|.++|.+++.+ + |+||+|++|++.++|++.+... ++..+.+|.++
T Consensus 325 ~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-----------------------~v~~~~~p~~a 381 (394)
T 3qfu_A 325 KTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGK-----------------------KASKGINPDEA 381 (394)
T ss_dssp HTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTC-----------------------CCBCCSCTTTH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCC-----------------------CCCCCcCHHHH
Confidence 3567788888877643 2 9999999999999999876321 23345578899
Q ss_pred hhhhhhhhcC
Q psy2594 76 VWFGGSMLAS 85 (117)
Q Consensus 76 aW~Ggsila~ 85 (117)
+|+|++++|.
T Consensus 382 va~Gaa~~a~ 391 (394)
T 3qfu_A 382 VAYGAAVQAG 391 (394)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 12
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=97.34 E-value=6.3e-05 Score=60.10 Aligned_cols=59 Identities=8% Similarity=0.001 Sum_probs=45.7
Q ss_pred CHHHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccc
Q psy2594 3 PLVATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYA 75 (117)
Q Consensus 3 gl~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~ 75 (117)
.+.+.|.++|..++.+ + |+||+|++|++.++|++++..- +....+|..+
T Consensus 284 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~------------------------~~~~~~p~~a 339 (509)
T 2v7y_A 284 RTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKE------------------------PHKGVNPDEV 339 (509)
T ss_dssp TTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSC------------------------CBCCSCTTTH
T ss_pred HHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCC------------------------cCcCCCchhh
Confidence 4667788888887643 2 9999999999999999877321 2234578899
Q ss_pred hhhhhhhhcC
Q psy2594 76 VWFGGSMLAS 85 (117)
Q Consensus 76 aW~Ggsila~ 85 (117)
+|.||+++|.
T Consensus 340 Va~Gaa~~a~ 349 (509)
T 2v7y_A 340 VAIGAAIQGG 349 (509)
T ss_dssp HHHHHHHHHH
T ss_pred hHhhHHHHHH
Confidence 9999999885
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=97.17 E-value=9.8e-05 Score=56.65 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccch
Q psy2594 4 LVATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAV 76 (117)
Q Consensus 4 l~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~a 76 (117)
+.+.|.++|.++..+ + |+||+|++|++.++|++.+... .+..+.+|..++
T Consensus 334 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-----------------------~v~~~~~p~~av 390 (404)
T 3i33_A 334 TLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK-----------------------ELNKSINPDEAV 390 (404)
T ss_dssp THHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-----------------------CCBCSSCTTTHH
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCC-----------------------CCCCCcCHHHHH
Confidence 567778888876543 2 9999999999999999766221 133455788999
Q ss_pred hhhhhhhcCC
Q psy2594 77 WFGGSMLAST 86 (117)
Q Consensus 77 W~Ggsila~l 86 (117)
+.|++++|.+
T Consensus 391 a~Gaa~~a~~ 400 (404)
T 3i33_A 391 AYGAAVQAAI 400 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.97 E-value=0.0021 Score=51.93 Aligned_cols=58 Identities=14% Similarity=0.032 Sum_probs=41.6
Q ss_pred HHHHHHHHhcCCC---ce----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchh
Q psy2594 5 VATRLKWLLNCPD---EA----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVW 77 (117)
Q Consensus 5 ~~~i~~si~~cp~---d~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW 77 (117)
.+.|.++|..+.. |+ |+||+|.+|++.++|++.+... .+....+|..+++
T Consensus 314 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~-----------------------~v~~~~np~~aVA 370 (554)
T 1yuw_A 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-----------------------ELNKSINPDEAVA 370 (554)
T ss_dssp THHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-----------------------CCBCCSCTTTHHH
T ss_pred HHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCC-----------------------ccccCCCchhHHH
Confidence 4556677776543 22 9999999999999998765321 1233457889999
Q ss_pred hhhhhhcC
Q psy2594 78 FGGSMLAS 85 (117)
Q Consensus 78 ~Ggsila~ 85 (117)
.|++++|.
T Consensus 371 ~Gaa~~a~ 378 (554)
T 1yuw_A 371 YGAAVQAA 378 (554)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.95 E-value=0.0024 Score=52.12 Aligned_cols=58 Identities=7% Similarity=-0.082 Sum_probs=43.3
Q ss_pred HHHHHHHHHhcCCC---ce----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccch
Q psy2594 4 LVATRLKWLLNCPD---EA----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAV 76 (117)
Q Consensus 4 l~~~i~~si~~cp~---d~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~a 76 (117)
+.+.|.++|..+.. |+ |+||+|.+|++.++|++.+..- +....+|..++
T Consensus 316 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~------------------------~~~~~npd~aV 371 (605)
T 2kho_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE------------------------PRKDVNPDEAV 371 (605)
T ss_dssp GTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSC------------------------CBCSSCTTTHH
T ss_pred HHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCC------------------------cCcCCCcchHH
Confidence 45667778887653 22 9999999999999998776221 22345678999
Q ss_pred hhhhhhhcC
Q psy2594 77 WFGGSMLAS 85 (117)
Q Consensus 77 W~Ggsila~ 85 (117)
+.|+++.|.
T Consensus 372 A~GAa~~a~ 380 (605)
T 2kho_A 372 AIGAAVQGG 380 (605)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999985
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=95.03 E-value=0.011 Score=49.02 Aligned_cols=58 Identities=14% Similarity=0.065 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCCC---ce----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccch
Q psy2594 4 LVATRLKWLLNCPD---EA----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAV 76 (117)
Q Consensus 4 l~~~i~~si~~cp~---d~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~a 76 (117)
+.+.|.++|..+.. |+ |+||+|.+|++.++|++.+.. .+....+|..++
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~------------------------~~~~~~nPdeaV 372 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK------------------------PLSTTLNQDEAI 372 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS------------------------CEECCSCTTTHH
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCC------------------------CccccCCcchHH
Confidence 44566677766532 23 999999999999999877621 123455678899
Q ss_pred hhhhhhhcC
Q psy2594 77 WFGGSMLAS 85 (117)
Q Consensus 77 W~Ggsila~ 85 (117)
.+|+++.|.
T Consensus 373 A~GAa~~a~ 381 (675)
T 3d2f_A 373 AKGAAFICA 381 (675)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=94.86 E-value=0.0071 Score=46.38 Aligned_cols=62 Identities=6% Similarity=-0.141 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEE------EeCC
Q psy2594 4 LVATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQV------ITHH 70 (117)
Q Consensus 4 l~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v------~~~~ 70 (117)
+.+.|.++|.++..+ + |+||+|.+|++.++|++.+... ++| ....
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~----------------------~~v~~P~~~~~~~ 384 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPES----------------------TRILAPSTDPSAL 384 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTT----------------------SEEESTTTCTTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCc----------------------cccccccccCCCc
Confidence 556777777776432 2 9999999999999998765321 233 2234
Q ss_pred CcccchhhhhhhhcCCc
Q psy2594 71 MQRYAVWFGGSMLASTP 87 (117)
Q Consensus 71 ~~~~~aW~Ggsila~l~ 87 (117)
+|..++=.|+++.+...
T Consensus 385 ~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 385 NPSELQARGAALQASLI 401 (409)
T ss_dssp CTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhhh
Confidence 67888889999998754
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=91.91 E-value=0.046 Score=41.23 Aligned_cols=37 Identities=19% Similarity=0.035 Sum_probs=27.5
Q ss_pred HHHHHHHHHhcC-------CCc-e-eecCCCCcccHHHHHHHHHHh
Q psy2594 4 LVATRLKWLLNC-------PDE-A-ECTPNSKHRAKKTWLQRDIKR 40 (117)
Q Consensus 4 l~~~i~~si~~c-------p~d-~-l~GG~s~~~Gf~~RL~~EL~~ 40 (117)
|.+.|.++|..+ +++ + |+||+|++||+.++|++++..
T Consensus 287 i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~ 332 (377)
T 2ych_A 287 LTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV 332 (377)
T ss_dssp HHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC
Confidence 455666777643 222 2 999999999999999998853
No 19
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=90.57 E-value=0.25 Score=35.68 Aligned_cols=42 Identities=12% Similarity=0.189 Sum_probs=32.6
Q ss_pred eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhhcC
Q psy2594 20 ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLAS 85 (117)
Q Consensus 20 l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsila~ 85 (117)
|+||.+..|++.++|++++.. +++.|++|.+..=+|++++|.
T Consensus 212 l~GGva~n~~lr~~l~~~~g~------------------------~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 212 MVGGVARNSGIVRAMAREINT------------------------EIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp EESGGGGCHHHHHHHHHHHTS------------------------CEECCSSGGGHHHHHHHHHHH
T ss_pred EecCccchHHHHHHHHHHHCC------------------------CeeeCCCcchHHHHHHHHHHH
Confidence 999999999999998765421 245566778877789999873
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=89.79 E-value=0.13 Score=41.76 Aligned_cols=34 Identities=3% Similarity=-0.155 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCc---e----eecCCCCcccHHHHHHHHH
Q psy2594 5 VATRLKWLLNCPDE---A----ECTPNSKHRAKKTWLQRDI 38 (117)
Q Consensus 5 ~~~i~~si~~cp~d---~----l~GG~s~~~Gf~~RL~~EL 38 (117)
.+.|.++|.....+ + |+||+|.+|++.++|++.+
T Consensus 317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f 357 (605)
T 4b9q_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357 (605)
T ss_dssp THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh
Confidence 45566677665432 2 9999999999999998776
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=89.25 E-value=0.2 Score=39.01 Aligned_cols=37 Identities=8% Similarity=0.008 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCC-------c-----e-eecCCCCcccHHHHHHHHHHh
Q psy2594 4 LVATRLKWLLNCPD-------E-----A-ECTPNSKHRAKKTWLQRDIKR 40 (117)
Q Consensus 4 l~~~i~~si~~cp~-------d-----~-l~GG~s~~~Gf~~RL~~EL~~ 40 (117)
|.+.|.++|..++. + + |+||+|++||+.+.+++.+..
T Consensus 305 i~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~ 354 (419)
T 4a2a_A 305 IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS 354 (419)
T ss_dssp HHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC
Confidence 45667777776653 1 2 999999999999999988743
No 22
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=81.66 E-value=3.2 Score=30.86 Aligned_cols=44 Identities=5% Similarity=-0.108 Sum_probs=35.4
Q ss_pred eecC-CCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhhc
Q psy2594 20 ECTP-NSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLA 84 (117)
Q Consensus 20 l~GG-~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsila 84 (117)
++|| .+..|++.++|.+.+... ..++..+++++|..=+||++++
T Consensus 242 f~Gg~l~~n~~l~~~l~~~~~~~---------------------~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 242 YIGSSFHNNALLRKVVEDYTVLR---------------------GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp EESGGGTTCHHHHHHHHHHHHHT---------------------TCEEEECTTGGGHHHHHHHHTC
T ss_pred EeCCchhcCHHHHHHHHHHHhhC---------------------CceEEECCCccHHHHHHHHHhC
Confidence 8999 899999999999655442 2467778889999999999875
No 23
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=73.42 E-value=3.8 Score=30.31 Aligned_cols=65 Identities=6% Similarity=-0.097 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
...|.+.+...+++. |.||-+..+-|-+++++.+++.+ .+....++|....-...+.=+||+.
T Consensus 258 a~~i~~l~~~l~p~~IvlgGgi~~~~~l~~~l~~~l~~~~---------------~~~~~~~~i~~s~lg~~a~~~GAa~ 322 (327)
T 4db3_A 258 AICFGNIFTANDPHVVALGGGLSNFELIYEEMPKRVPKYL---------------LSVAKCPKIIKAKHGDSGGVRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHCCSEEEEESGGGGCTHHHHHHHHHGGGGS---------------CTTCCCCEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCcccchHHHHHHHHHHHHHHh---------------ccccCCCEEEECCCCCcHHHHHHHH
Confidence 345555556556665 56666655555555555554432 1122345566655556677789987
Q ss_pred hc
Q psy2594 83 LA 84 (117)
Q Consensus 83 la 84 (117)
++
T Consensus 323 l~ 324 (327)
T 4db3_A 323 LN 324 (327)
T ss_dssp TT
T ss_pred HH
Confidence 76
No 24
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=72.20 E-value=1.7 Score=31.48 Aligned_cols=59 Identities=8% Similarity=0.079 Sum_probs=39.8
Q ss_pred CHHHHHHHHHhcCCC-c-e-eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhh
Q psy2594 3 PLVATRLKWLLNCPD-E-A-ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFG 79 (117)
Q Consensus 3 gl~~~i~~si~~cp~-d-~-l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~G 79 (117)
+|...+.+.+...++ + + ++||.+..+++.+.+.+.+.. .|..++.+.+..=+|
T Consensus 194 ~Va~~i~~~~~~~~~~~~i~~~GG~a~n~~~~~~~~~~lg~------------------------~v~~p~~~~~~~AlG 249 (270)
T 1hux_A 194 SVASRVIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLGV------------------------EIKTSPLAQYNGALG 249 (270)
T ss_dssp HHHHHHHHHHHTTCCCSSEEEESGGGGCHHHHHHHHHHHCS------------------------CEECCGGGGGHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCccccCHHHHHHHHHHHCC------------------------CeEeCCCcchHhHHH
Confidence 344445555555553 3 3 999999999999888766522 144455677777789
Q ss_pred hhhhcC
Q psy2594 80 GSMLAS 85 (117)
Q Consensus 80 gsila~ 85 (117)
++++|.
T Consensus 250 AAl~A~ 255 (270)
T 1hux_A 250 AALYAY 255 (270)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 25
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=72.10 E-value=5.9 Score=28.41 Aligned_cols=68 Identities=10% Similarity=-0.013 Sum_probs=37.1
Q ss_pred HHHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
...+.+.+...+++. |.||.+..+-|.+++++.+++..... ......+.|........+.-+||+.
T Consensus 216 ~~~i~~l~~~l~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~------------~~~~~~~~i~~~~~~~~a~~~GAa~ 283 (292)
T 2gup_A 216 AQGLLNIQYLIDPGVISLGGSISQNPDFIQGVKKAVEDFVDAY------------EEYTVAPVIQACTYHADANLYGALV 283 (292)
T ss_dssp HHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHHHHHHHHHC------------TTCCSCCCEEECSCSTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCccccchHHHHHHHHHHHHhhccc------------ccccCCCeEEEcccCChhhHHHHHH
Confidence 344555555555564 66666555667777777776654221 0000123444443344567789887
Q ss_pred hc
Q psy2594 83 LA 84 (117)
Q Consensus 83 la 84 (117)
++
T Consensus 284 ~~ 285 (292)
T 2gup_A 284 NW 285 (292)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 26
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=65.28 E-value=4.2 Score=29.14 Aligned_cols=63 Identities=10% Similarity=0.051 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
...+.+.+...+++. |.||.+..+-|.+++++.+++.. .+ ..+.+........++-+||+.
T Consensus 222 ~~~i~~l~~~l~p~~ivlgG~~~~~~~~~~~l~~~l~~~~---------------~~--~~~~i~~~~~~~~a~~~GAa~ 284 (289)
T 2aa4_A 222 ARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEP---------------AA--FHVDLLAAHYRHDAGLLGAAL 284 (289)
T ss_dssp HHHHHHHHHHHCCSEEEEEHHHHTSTTHHHHHHHHHTTSC---------------GG--GCCEEEECSCSSCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccHHHHHHHHHHHHHhc---------------Cc--cCCEEEECCCCCchHHHHHHH
Confidence 344555555556665 56665555667777776665531 01 134455444445667789987
Q ss_pred hc
Q psy2594 83 LA 84 (117)
Q Consensus 83 la 84 (117)
++
T Consensus 285 l~ 286 (289)
T 2aa4_A 285 LA 286 (289)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 27
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=64.21 E-value=4.6 Score=29.60 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=32.8
Q ss_pred HHHHHHHHhcC-CCc-e-eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhh
Q psy2594 5 VATRLKWLLNC-PDE-A-ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGS 81 (117)
Q Consensus 5 ~~~i~~si~~c-p~d-~-l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggs 81 (117)
.+-|.+.|.+. +++ + |+||++.+ + .+.|++.+ +.. .-++..+++|.++.=+|+.
T Consensus 260 ~~~i~~~i~~~~~~~~vvl~GGga~l--l----~~~l~~~~----------------~~~-~~~~~~~~~P~~a~A~G~~ 316 (320)
T 2zgy_A 260 EQRVLNTLNEFSGYTHVMVIGGGAEL--I----CDAVKKHT----------------QIR-DERFFKTNNSQYDLVNGMY 316 (320)
T ss_dssp HHHHHHHHTTCCCCCEEEEESTTHHH--H----HHHHHHTS----------------CCC-GGGEECCSCGGGHHHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEECChHHH--H----HHHHHHHh----------------CCC-CCceeeCCCcHHHHHHHHH
Confidence 34556666553 233 2 99999976 3 33333332 110 0023446678999999998
Q ss_pred hhc
Q psy2594 82 MLA 84 (117)
Q Consensus 82 ila 84 (117)
+++
T Consensus 317 ~~~ 319 (320)
T 2zgy_A 317 LIG 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 28
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=64.21 E-value=4 Score=29.98 Aligned_cols=66 Identities=9% Similarity=-0.091 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCCCce--eecCCCCc-ccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKH-RAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGS 81 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~-~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggs 81 (117)
...|.+.+.-.+++. |.||-+.. +-|.+++++.+++.+... ....++|........+.-+||+
T Consensus 249 a~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~--------------~~~~~~i~~s~l~~~a~~~GAa 314 (321)
T 3r8e_A 249 GESLVNIVRVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTY--------------YTDDMYIGKATLENDAGLLGAA 314 (321)
T ss_dssp HHHHHHHHHHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHH--------------HHTTCEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccc--------------cCCCCEEEEcCCCCcHHHHHHH
Confidence 345555566666665 55665544 556677777776653110 0112456665555677888998
Q ss_pred hhc
Q psy2594 82 MLA 84 (117)
Q Consensus 82 ila 84 (117)
.++
T Consensus 315 ~l~ 317 (321)
T 3r8e_A 315 GLI 317 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 29
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=59.21 E-value=9.9 Score=27.53 Aligned_cols=63 Identities=8% Similarity=-0.064 Sum_probs=38.8
Q ss_pred HHHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
...|.+.+.-.+++. |.||-+..+.|-+++++.++... .. .+.|....-...+.=+||+.
T Consensus 226 a~~i~~l~~~~~p~~IvlgGgi~~~~~~~~~l~~~l~~~~----------------~~--~~~i~~s~lg~~a~~~GAa~ 287 (297)
T 4htl_A 226 CTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFG----------------LR--DTIIETATHKNQAGLLGAVY 287 (297)
T ss_dssp HHHHHHHHHHHCCSEEEEESGGGGSTTHHHHHHHHHTTTC----------------CT--TCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCcccccHHHHHHHHHHHHHhc----------------cC--CCeEEECCcCChHHHHhHHH
Confidence 345555556556665 67777776777777776665431 11 23455555456677889987
Q ss_pred hcC
Q psy2594 83 LAS 85 (117)
Q Consensus 83 la~ 85 (117)
++.
T Consensus 288 l~~ 290 (297)
T 4htl_A 288 HFL 290 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 30
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=57.48 E-value=12 Score=27.42 Aligned_cols=72 Identities=10% Similarity=0.108 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCC---CceeEEEEeCCCcccchhh
Q psy2594 4 LVATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKP---KPIDVQVITHHMQRYAVWF 78 (117)
Q Consensus 4 l~~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~~~~~~aW~ 78 (117)
|...|.+.+.-.++|. |.||-+..+.|-+++++.+++.+.... ..| ...++.|....-...+.-+
T Consensus 212 La~~i~nl~~~ldPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~----------~~~~~~~~~~~~I~~s~lg~~a~l~ 281 (302)
T 3epq_A 212 IAQALAQYILILAPXXIILGGGVMQQXQVFSYIYQYVPKIMNSYL----------DFSELSDDISDYIVPPRLGSNAGII 281 (302)
T ss_dssp HHHHHHHHHHHTCCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCS----------CCGGGTTTGGGTEECCTTGGGHHHH
T ss_pred HHHHHHHHHHHHCchhhhcCchhhhhHHHHHHHHHHHHHHHhhhc----------cCcccccccCceEEECCcCChHHHH
Confidence 4456777777788886 566666666677888888877652100 001 0112345555555677888
Q ss_pred hhhhhcC
Q psy2594 79 GGSMLAS 85 (117)
Q Consensus 79 Ggsila~ 85 (117)
||+.++-
T Consensus 282 GAa~l~~ 288 (302)
T 3epq_A 282 GTLVLAH 288 (302)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998763
No 31
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=51.99 E-value=8.4 Score=27.90 Aligned_cols=67 Identities=7% Similarity=-0.067 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCce--eecCCCC-cccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSK-HRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGS 81 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~-~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggs 81 (117)
...|.+.+...+++. |.||.+. .+-|.+++++.+++...... ...+.|........++-+||+
T Consensus 251 ~~~i~~l~~~l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~--------------~~~~~i~~~~~~~~a~~~GAa 316 (326)
T 2qm1_A 251 GLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQV--------------RNSTKIKLAELGNEAGVIGAA 316 (326)
T ss_dssp HHHHHHHHHHHCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHH--------------HTTSEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhcc--------------CCCcEEEEcCcCchHHHHHHH
Confidence 344555555555564 5566543 45666777776665421100 012345544444566778998
Q ss_pred hhcC
Q psy2594 82 MLAS 85 (117)
Q Consensus 82 ila~ 85 (117)
.++.
T Consensus 317 ~l~~ 320 (326)
T 2qm1_A 317 SLAL 320 (326)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 8763
No 32
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=51.68 E-value=19 Score=26.95 Aligned_cols=65 Identities=11% Similarity=-0.038 Sum_probs=34.6
Q ss_pred HHHHHHHHhcCCCce--eecCCCCc-ccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKH-RAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGS 81 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~-~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggs 81 (117)
...+.+.+...+++. |.||.+.. +-|.+++++.+.+.. .+. ..+.|........++-+||+
T Consensus 303 a~~i~~l~~~ldP~~IvlgG~~~~~~~~l~~~l~~~l~~~~---------------~~~-~~~~i~~s~~~~~a~~~GAa 366 (380)
T 2hoe_A 303 SIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHL---------------LYK-HSVDMSFSKVQEPVIAFGAA 366 (380)
T ss_dssp HHHHHHHHHHHCCCEEEEEEGGGGGHHHHHHHHHHHHHHHC---------------SSS-CCCEEEECCCCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcCchhhhhHHHHHHHHHHHHHhc---------------CCC-CCcEEEEcCCCCcHHHHHHH
Confidence 345555555556665 55555432 445555555555432 111 23455544444556778988
Q ss_pred hhcC
Q psy2594 82 MLAS 85 (117)
Q Consensus 82 ila~ 85 (117)
.++.
T Consensus 367 ~l~~ 370 (380)
T 2hoe_A 367 VHAL 370 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 33
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=49.39 E-value=13 Score=26.93 Aligned_cols=65 Identities=8% Similarity=-0.103 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCCCce--eecCCC-C-cccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNS-K-HRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGG 80 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s-~-~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Gg 80 (117)
...|.+.+.-.+++. |.||.+ . .+-|.+++++++++.+.. .....|....-...++-+||
T Consensus 226 ~~~i~~l~~~~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~----------------~~~~~i~~s~lg~~a~~~GA 289 (302)
T 3vov_A 226 GIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQG----------------WEAPPLRRARLGAEAGLLGA 289 (302)
T ss_dssp HHHHHHHHHHHCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTT----------------SCCCCEEECSSGGGHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcch----------------hcCCcEEEcCCCCcHHHHHH
Confidence 344555555556665 555544 3 355778888887775311 11112444444556777899
Q ss_pred hhhcC
Q psy2594 81 SMLAS 85 (117)
Q Consensus 81 sila~ 85 (117)
+.++-
T Consensus 290 a~l~~ 294 (302)
T 3vov_A 290 ALTAY 294 (302)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88763
No 34
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=47.37 E-value=14 Score=27.37 Aligned_cols=54 Identities=11% Similarity=0.097 Sum_probs=32.6
Q ss_pred HHHHHHHh--cCCCce-----eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhh
Q psy2594 6 ATRLKWLL--NCPDEA-----ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWF 78 (117)
Q Consensus 6 ~~i~~si~--~cp~d~-----l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~ 78 (117)
+.|++.|. .+|.+. |+||.+.+ +.+.|++++ +. ++.-.++|.++.=+
T Consensus 263 ~~I~~~i~~~~~~~~~~~~IvltGGGA~l--~~~~l~~~~--------------------~~----~v~v~~~P~~a~a~ 316 (329)
T 4apw_A 263 KDAIKLIEKRGFKLDQLDSLIFIGGTTQK--LKEQISKTY--------------------PN----NSIITNNSQWTTCE 316 (329)
T ss_dssp HHHHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHS--------------------TT----CEECCSSGGGHHHH
T ss_pred HHHHHHHHHcCCCHHHccEEEEECChHHH--HHHHHHHHc--------------------CC----CCEecCCChhhHHH
Confidence 44555555 366662 99999998 334444332 11 13346678888888
Q ss_pred hhhhhcC
Q psy2594 79 GGSMLAS 85 (117)
Q Consensus 79 Ggsila~ 85 (117)
|.-.++.
T Consensus 317 G~~~~~~ 323 (329)
T 4apw_A 317 GLYKVAV 323 (329)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776653
No 35
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=46.54 E-value=34 Score=25.81 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcC--CCce--eecCCCCccc-HHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhh
Q psy2594 4 LVATRLKWLLNC--PDEA--ECTPNSKHRA-KKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWF 78 (117)
Q Consensus 4 l~~~i~~si~~c--p~d~--l~GG~s~~~G-f~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~ 78 (117)
|...|.+.+... ++|. |.||-+...- |.+++++.+... . .+.|........+.-+
T Consensus 281 la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~----------------~----~~~i~~~~~~~~a~~~ 340 (381)
T 1saz_A 281 IAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFI----------------A----PVLVFPGSNEEKALAL 340 (381)
T ss_dssp HHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTT----------------S----CEEEEEBCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhh----------------c----CeEEEecCcchhHHHH
Confidence 345566666666 6775 7777665444 667777666543 1 3456555444456678
Q ss_pred hhhhhcCCccccc-----ceecHHHHhhhCCceEEe
Q psy2594 79 GGSMLASTPEFYE-----VCHTKAAYEEYGPSICRH 109 (117)
Q Consensus 79 Ggsila~l~~~~~-----~~itr~eY~E~G~~~~~~ 109 (117)
|++.++....-.. .---|+-|+.++.-++++
T Consensus 341 GAa~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T 1saz_A 341 SALRVLRGEEKPKNYSEESRRWRERYDSYLDGILRH 376 (381)
T ss_dssp HHHHHHTTSSCCEEHHHHHHHHHHHHHHHTGGGCC-
T ss_pred HHHHHHcCCcccccchhHhHHHHHHHHhhhhhhhhc
Confidence 8888775431000 111356677777766654
No 36
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=45.64 E-value=24 Score=25.69 Aligned_cols=67 Identities=15% Similarity=-0.015 Sum_probs=37.7
Q ss_pred HHHHHHHHhcCCCce--eecCCCCc-ccHHHHHHHHHHhhHH-HhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSKH-RAKKTWLQRDIKRVVD-ARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGG 80 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~~-~Gf~~RL~~EL~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Gg 80 (117)
...|.+.+...+++. |.||.+.. +-|.+++++.+++.+. . +....++|....-...+.=+||
T Consensus 241 a~~i~~l~~~l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~--------------~~~~~~~i~~s~l~~~a~l~GA 306 (321)
T 3vgl_A 241 GAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGG--------------EWRPHAQVLAAQLGGKAGLVGA 306 (321)
T ss_dssp HHHHHHHHHHHCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTG--------------GGSCCCEEEECTTGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeChhhcchHHHHHHHHHHHHHhcccc--------------cccCCCEEEECCCCCcHHHHHH
Confidence 345555556656665 55665544 3345666666665431 0 0112345666555567778899
Q ss_pred hhhcC
Q psy2594 81 SMLAS 85 (117)
Q Consensus 81 sila~ 85 (117)
+.++.
T Consensus 307 a~l~~ 311 (321)
T 3vgl_A 307 ADLAR 311 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 37
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=45.15 E-value=20 Score=26.11 Aligned_cols=72 Identities=11% Similarity=-0.047 Sum_probs=41.6
Q ss_pred HHHHHHhcCCCce--eecCCCCccc-HHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhh
Q psy2594 7 TRLKWLLNCPDEA--ECTPNSKHRA-KKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSML 83 (117)
Q Consensus 7 ~i~~si~~cp~d~--l~GG~s~~~G-f~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsil 83 (117)
.+.+.+.-.++|. |.||-+..+. +.++|.+.+++.+... ....+++|....-...+.-+||+.+
T Consensus 230 ~la~l~~~~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~-------------~~~~~~~i~~s~lg~~ag~~GAa~l 296 (310)
T 3htv_A 230 AIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRP-------------LPHQVVRFIAASSSDFNGAQGAAIL 296 (310)
T ss_dssp HHHHHHHHHCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTT-------------TTTTTCEEEECCCCTTHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCchhccchhHHHHHHHHHHHHhhcc-------------cccCCcEEEEcCCCCcHHHHHHHHH
Confidence 4445555566665 5666665543 4677887777664110 0112456666555567788999988
Q ss_pred cCCccccc
Q psy2594 84 ASTPEFYE 91 (117)
Q Consensus 84 a~l~~~~~ 91 (117)
+....|.+
T Consensus 297 a~~~~~~~ 304 (310)
T 3htv_A 297 AHQRFLPQ 304 (310)
T ss_dssp HHHHHCC-
T ss_pred HHHHhhcc
Confidence 75444433
No 38
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=44.78 E-value=52 Score=25.80 Aligned_cols=52 Identities=2% Similarity=-0.134 Sum_probs=37.5
Q ss_pred eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCC--CceeEEEEeCCCcccchhhhhhhhcCC
Q psy2594 20 ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKP--KPIDVQVITHHMQRYAVWFGGSMLAST 86 (117)
Q Consensus 20 l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~~~~~~aW~Ggsila~l 86 (117)
+-||....|+|.+++++.|+.++... .+ ...+|.+....| .+=+||+++|..
T Consensus 389 vdGsv~~~p~f~~~l~~~l~~l~~~~------------~~~~~~~~v~~~~~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 389 AXGSXRSYSGFSXNSATXNXNIYGWP------------QSAXXSKPIXITPAID---GXGAASXVIXSI 442 (457)
T ss_dssp EESTTTTSTTHHHHHHHHHHHHHCCC------------CSSGGGSSEEEEECCC---TTTHHHHHHHHH
T ss_pred EECCcccCchHHHHHHHHHHHhhCcc------------cccccCcceEEEECCC---chhhhHHHHHHH
Confidence 78888999999999999999986320 00 134677776654 456899998764
No 39
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=43.14 E-value=9.6 Score=29.45 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCC---ce-eecCCCCcccHHHHHHHHH
Q psy2594 5 VATRLKWLLNCPD---EA-ECTPNSKHRAKKTWLQRDI 38 (117)
Q Consensus 5 ~~~i~~si~~cp~---d~-l~GG~s~~~Gf~~RL~~EL 38 (117)
.+.|.+++.+++. ++ +|||...-|-+.+||++.|
T Consensus 270 A~sIa~~~~~~~~~~~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 270 ARSISESLLDAQPDCEEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESGGGGCHHHHHHHHHHC
T ss_pred HHHHHHHHHhccCCCceEEEECCccCcHHHHHHHHHhC
Confidence 3567777776543 33 9999999999999998655
No 40
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=41.24 E-value=31 Score=26.94 Aligned_cols=60 Identities=7% Similarity=-0.078 Sum_probs=38.4
Q ss_pred HHHHHhcCCCc---eeecCCC--CcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 8 RLKWLLNCPDE---AECTPNS--KHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 8 i~~si~~cp~d---~l~GG~s--~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
|...+.+.+.+ +.+||+. ..|.|.+++++.+++++ .+ ..+|.+... ...+-+||++
T Consensus 382 ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~---------------~~-~~~i~~~l~---~dgs~iGAAl 442 (451)
T 1bdg_A 382 IACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLK---------------PK-NTRFCLRLS---EDGSGKGAAA 442 (451)
T ss_dssp HHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHS---------------CT-TCEEEEEEC---TTHHHHHHHH
T ss_pred HHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHh---------------CC-CCcEEEEEC---CCccHHHHHH
Confidence 33334444444 2444443 68899999999998874 12 335665533 5678999999
Q ss_pred hcCC
Q psy2594 83 LAST 86 (117)
Q Consensus 83 la~l 86 (117)
+|..
T Consensus 443 lA~~ 446 (451)
T 1bdg_A 443 IAAS 446 (451)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8864
No 41
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=41.18 E-value=10 Score=29.32 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCC--ce-eecCCCCcccHHHHHHHHH
Q psy2594 5 VATRLKWLLNCPD--EA-ECTPNSKHRAKKTWLQRDI 38 (117)
Q Consensus 5 ~~~i~~si~~cp~--d~-l~GG~s~~~Gf~~RL~~EL 38 (117)
.+.|.+++.+++. ++ +|||...-|-+.+||+..|
T Consensus 277 A~sIa~~~~~~~~~~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 277 CHSIAQDILKLAQEGELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp HHHHHHHHHHHCSSEEEEEESGGGGCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCEEEEECCCcCCHHHHHHHHHhC
Confidence 4567788876552 23 9999999999999998654
No 42
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=40.71 E-value=9.5 Score=27.82 Aligned_cols=22 Identities=9% Similarity=0.012 Sum_probs=13.8
Q ss_pred eEEEEeCCCcccchhhhhhhhc
Q psy2594 63 DVQVITHHMQRYAVWFGGSMLA 84 (117)
Q Consensus 63 ~v~v~~~~~~~~~aW~Ggsila 84 (117)
.+.|........++-+||+.++
T Consensus 303 ~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 303 APRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp CCEEEECSCTTTHHHHHHHHTT
T ss_pred CCEEEEcCCCCcHHHHHHHHHH
Confidence 3455554444556778988776
No 43
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=40.17 E-value=4.4 Score=19.41 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.2
Q ss_pred cceecHHHHhhhCCc
Q psy2594 91 EVCHTKAAYEEYGPS 105 (117)
Q Consensus 91 ~~~itr~eY~E~G~~ 105 (117)
...+|-++|+|+|..
T Consensus 8 Gi~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 8 GIKLSGAQYQQHGRA 22 (26)
T ss_dssp TGGGHHHHCSCSSSC
T ss_pred eeEecHHHHHHHhHH
Confidence 456789999999975
No 44
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=39.57 E-value=46 Score=24.26 Aligned_cols=37 Identities=8% Similarity=-0.120 Sum_probs=20.3
Q ss_pred HHHHHHHHHhcCCCce-eecCCCCcccHHHHHHHHHHhh
Q psy2594 4 LVATRLKWLLNCPDEA-ECTPNSKHRAKKTWLQRDIKRV 41 (117)
Q Consensus 4 l~~~i~~si~~cp~d~-l~GG~s~~~Gf~~RL~~EL~~~ 41 (117)
|..+|.+.+...+++. +.||.- .+-|.+.|++.+++.
T Consensus 272 La~~i~~l~~~l~P~~IvlgG~i-~~~~~~~l~~~l~~~ 309 (343)
T 2yhw_A 272 LGLGVVNILHTMNPSLVILSGVL-ASHYIHIVKDVIRQQ 309 (343)
T ss_dssp HHHHHHHHHHHTCCSEEEEESTT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCc-HHHHHHHHHHHHHHh
Confidence 3445556666666665 444432 355666666666554
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=38.88 E-value=37 Score=25.96 Aligned_cols=49 Identities=6% Similarity=-0.099 Sum_probs=36.1
Q ss_pred ce-eecC-CCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhhc
Q psy2594 18 EA-ECTP-NSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLA 84 (117)
Q Consensus 18 d~-l~GG-~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsila 84 (117)
++ ++|| .+..|++.+.|++.|.--- ...+++..+++++|+.=+||++.+
T Consensus 308 ~IvftGgfla~n~~~~~~L~~~l~~ws------------------~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 308 RVVFVGNFLRINMVSMKLLAYAMDFWS------------------KGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CEEEESGGGCSSSHHHHHHHHHHHHHT------------------TTSCCEEEETTTTCHHHHHHHHHH
T ss_pred eEEEeCcccccCHHHHHHHHHHHhhhh------------------cCCeeEEEcCCccHHHHHHHHHHh
Confidence 44 8999 9999999999998886431 112345556678899889998764
No 46
>2lc0_A Putative uncharacterized protein TB39.8; FHAA, kinase substrate, protein binding; NMR {Mycobacterium tuberculosis}
Probab=34.16 E-value=4.8 Score=26.55 Aligned_cols=73 Identities=10% Similarity=0.137 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhhcCCcccccceecHHHHhhhCCceEE
Q psy2594 29 AKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYEVCHTKAAYEEYGPSICR 108 (117)
Q Consensus 29 Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsila~l~~~~~~~itr~eY~E~G~~~~~ 108 (117)
=+..+|++|+..... ....|..+.|+.+.|.+.+....++++|-. .+-..+..+-...+..+.|.=.|+-.++
T Consensus 35 EIa~~L~RE~d~~~~------~~~~~r~~aPN~y~V~Ls~~D~~~l~~~~~-~l~~el~~~l~~~a~~qgy~~~G~v~V~ 107 (132)
T 2lc0_A 35 EVEALLRREAADGIQ------SLQGNRLLAPNEYIITLGVHDFEKLGADPE-LKSTGFARDLADYIQEQGWQTYGDVVVR 107 (132)
T ss_dssp HHHHHHHHHHHHTCB------CCCTTCCBCCCEEEEEEEHHHHHHHCSCSH-HHHHHHHHHHHHHHHHHTCBCSSCCEEE
T ss_pred HHHHHHHHHHHhCCe------EcCCCcEEcCceEEEEeCHHHHHHHHhhhH-HHHHHHHHHHHHHHHHCCCeecCCeEEE
Confidence 355666666654320 011234567888889888877677888864 4444455555667777888888876553
No 47
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=32.56 E-value=45 Score=24.18 Aligned_cols=65 Identities=12% Similarity=-0.012 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCCc--------e--eecCCCC-cccHHHHHHHHHHhhH--HHhhhhhhhccCCCCCCCceeEEEEeCC
Q psy2594 4 LVATRLKWLLNCPDE--------A--ECTPNSK-HRAKKTWLQRDIKRVV--DARLKLSETLSGGYIKPKPIDVQVITHH 70 (117)
Q Consensus 4 l~~~i~~si~~cp~d--------~--l~GG~s~-~~Gf~~RL~~EL~~~~--~~~~~~~~~~~~~~~~~~~~~v~v~~~~ 70 (117)
|...|.+.+...+++ . |.||-+. .+-|.+++++.+++.. +. ......|.+...
T Consensus 245 La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~-------------~~~~~~i~~~~~- 310 (347)
T 2ch5_A 245 LGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQA-------------QNFFSSFTLMKL- 310 (347)
T ss_dssp HHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---C-------------CCSCSEEEEEEE-
T ss_pred HHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccc-------------cccCCceEEEec-
Confidence 445667777777777 4 4455432 2445555555555442 10 011234444433
Q ss_pred Ccccchhhhhhhhc
Q psy2594 71 MQRYAVWFGGSMLA 84 (117)
Q Consensus 71 ~~~~~aW~Ggsila 84 (117)
.. ++-+||+.++
T Consensus 311 -~~-a~~~GAa~la 322 (347)
T 2ch5_A 311 -RH-SSALGGASLG 322 (347)
T ss_dssp -SS-CTHHHHHHHH
T ss_pred -CC-ChHHHHHHHH
Confidence 23 6778998876
No 48
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=32.07 E-value=64 Score=19.34 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=17.9
Q ss_pred CCcc-cHHHHHHHHHHhhHHHhh
Q psy2594 25 SKHR-AKKTWLQRDIKRVVDARL 46 (117)
Q Consensus 25 s~~~-Gf~~RL~~EL~~~~~~~~ 46 (117)
..+| |-.+.|+.||.+.+..++
T Consensus 11 ~~lp~ga~~aL~~EL~kRl~~~f 33 (81)
T 1ghh_A 11 SPLPAGAIDALAGELSRRIQYAF 33 (81)
T ss_dssp SCCCTTHHHHHHHHHHHHHHHHC
T ss_pred CCCChhHHHHHHHHHHHHHHhhC
Confidence 4666 999999999999886654
No 49
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=30.48 E-value=38 Score=25.22 Aligned_cols=35 Identities=6% Similarity=-0.031 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHh
Q psy2594 6 ATRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKR 40 (117)
Q Consensus 6 ~~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~ 40 (117)
+.+.+++++++.+- |+||...-..+.++|.+++..
T Consensus 239 ~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L~~~l~~ 275 (334)
T 3eno_A 239 EVLERALYVSGKDEILMAGGVALNRRLRDMVTNMARE 275 (334)
T ss_dssp HHHHHHHHHHTCSEEEEESSGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEcCCHHHHHHHHHHHHHHHHH
Confidence 33344444456553 999999988888888887754
No 50
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=29.61 E-value=40 Score=25.02 Aligned_cols=37 Identities=0% Similarity=-0.235 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCCce-ee-cC-CCCcccHHH--HHHHHHHhh
Q psy2594 5 VATRLKWLLNCPDEA-EC-TP-NSKHRAKKT--WLQRDIKRV 41 (117)
Q Consensus 5 ~~~i~~si~~cp~d~-l~-GG-~s~~~Gf~~--RL~~EL~~~ 41 (117)
...+.+.+...+.+. +. || .+..+-|-+ .+++++++.
T Consensus 293 ~~~i~~l~~~l~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~ 334 (373)
T 2q2r_A 293 MRVGSEASMALLPLTIVLVGDNIVNNAFFYRNPQNLKEMHHE 334 (373)
T ss_dssp HHHHHHHHHHHCCSEEEECSHHHHHTHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEeCChHhCchhhhcchhHHHHHHHH
Confidence 344555555555554 44 66 444455555 555566554
No 51
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=29.07 E-value=82 Score=21.10 Aligned_cols=24 Identities=21% Similarity=0.180 Sum_probs=18.3
Q ss_pred eecCCCCcccHHHHHHHHHHhhHH
Q psy2594 20 ECTPNSKHRAKKTWLQRDIKRVVD 43 (117)
Q Consensus 20 l~GG~s~~~Gf~~RL~~EL~~~~~ 43 (117)
|.++.+|-..-..||++|++.+..
T Consensus 14 ~~~~~~M~~~a~~RL~kEl~~l~~ 37 (169)
T 1yrv_A 14 LVPRGSMHGRAYLLLHRDFCDLKE 37 (169)
T ss_dssp -CCTTGGGCHHHHHHHHHHHHHHH
T ss_pred ccccCccChHHHHHHHHHHHHHHh
Confidence 566777776677999999999853
No 52
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=27.50 E-value=41 Score=22.00 Aligned_cols=14 Identities=0% Similarity=0.176 Sum_probs=11.0
Q ss_pred cHHHHHHHHHHhhH
Q psy2594 29 AKKTWLQRDIKRVV 42 (117)
Q Consensus 29 Gf~~RL~~EL~~~~ 42 (117)
|...||++|++.+.
T Consensus 1 g~~~RL~kEl~~l~ 14 (149)
T 2r0j_A 1 GIPRRITKETQNLA 14 (149)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 44589999999985
No 53
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=27.40 E-value=7.1 Score=29.16 Aligned_cols=17 Identities=18% Similarity=0.016 Sum_probs=12.2
Q ss_pred CCCcccchhhhhhhhcC
Q psy2594 69 HHMQRYAVWFGGSMLAS 85 (117)
Q Consensus 69 ~~~~~~~aW~Ggsila~ 85 (117)
..+|.++.=+|...++.
T Consensus 327 ~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 327 PEDLQFANALGYRDAAE 343 (346)
T ss_dssp TTTTTTHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHh
Confidence 45788888888876653
No 54
>2kp7_A Crossover junction endonuclease MUS81; helix-hairpin-helix, tumour suppressor, DNA damage, DNA recombination, DNA repair, hydrolase, magnesium; NMR {Mus musculus}
Probab=25.62 E-value=88 Score=18.75 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=20.5
Q ss_pred HHHHHhcCCCceeecC-CCCc----ccHHHHHHHHHHhhH
Q psy2594 8 RLKWLLNCPDEAECTP-NSKH----RAKKTWLQRDIKRVV 42 (117)
Q Consensus 8 i~~si~~cp~d~l~GG-~s~~----~Gf~~RL~~EL~~~~ 42 (117)
.++||.+||..+-+|= .-.+ +.+.++|...|+..+
T Consensus 43 A~~sLk~~P~~i~s~~e~~~L~giG~ki~~~L~e~L~~~c 82 (87)
T 2kp7_A 43 ALRSLQRYPLPLRSGKEAKILQHFGDRLCRMLDEKLKQHL 82 (87)
T ss_dssp HHHHHHHCCSCCCSHHHHHTCTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 5789999999881111 1234 445555555555554
No 55
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=25.18 E-value=49 Score=23.50 Aligned_cols=13 Identities=23% Similarity=0.258 Sum_probs=9.2
Q ss_pred ccchhhhhhhhcC
Q psy2594 73 RYAVWFGGSMLAS 85 (117)
Q Consensus 73 ~~~aW~Ggsila~ 85 (117)
..++-+||+.++.
T Consensus 274 ~~~~~~GAa~la~ 286 (299)
T 2e2o_A 274 KRSPEIGAVILAY 286 (299)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHH
Confidence 4566789888763
No 56
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=24.49 E-value=52 Score=16.62 Aligned_cols=13 Identities=8% Similarity=0.294 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhhH
Q psy2594 30 KKTWLQRDIKRVV 42 (117)
Q Consensus 30 f~~RL~~EL~~~~ 42 (117)
++.|+++||+.+-
T Consensus 4 lkarveqelqale 16 (40)
T 1abz_A 4 LKARVEQELQALE 16 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6789999999873
No 57
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=24.24 E-value=53 Score=24.18 Aligned_cols=21 Identities=5% Similarity=-0.096 Sum_probs=18.8
Q ss_pred eecCCCCcccHHHHHHHHHHh
Q psy2594 20 ECTPNSKHRAKKTWLQRDIKR 40 (117)
Q Consensus 20 l~GG~s~~~Gf~~RL~~EL~~ 40 (117)
++||...-..+.++|.+.++.
T Consensus 250 lsGGVa~N~~l~~~l~~~l~~ 270 (330)
T 2ivn_A 250 LVGGVAANNRLREMLRIMTED 270 (330)
T ss_dssp EESGGGGCHHHHHHHHHHHHH
T ss_pred EEccHHHHHHHHHHHHHHHHH
Confidence 999999999999999988855
No 58
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=22.51 E-value=12 Score=28.17 Aligned_cols=16 Identities=13% Similarity=0.073 Sum_probs=13.2
Q ss_pred CCcccchhhhhhhhcC
Q psy2594 70 HMQRYAVWFGGSMLAS 85 (117)
Q Consensus 70 ~~~~~~aW~Ggsila~ 85 (117)
++|.++.=.|..+++.
T Consensus 320 ~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 320 DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp SSGGGHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 6889998888888765
No 59
>2ygw_A Malonyl-COA decarboxylase, mitochondrial; lyase; 2.80A {Homo sapiens}
Probab=22.13 E-value=2.7 Score=33.46 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=28.4
Q ss_pred HHHHHHhcCCCce--eecCCCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhh
Q psy2594 7 TRLKWLLNCPDEA--ECTPNSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSM 82 (117)
Q Consensus 7 ~i~~si~~cp~d~--l~GG~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsi 82 (117)
+||.||++|..-+ +.=|+.+|+-..+.|++|+-.+ +.=+.-.|-|.|..|+.+..
T Consensus 256 AIFYSISntQ~GL~GIsfGnfLIKrVV~~L~~E~P~l---------------------ktF~TLSPIPGF~~WL~~~l 312 (460)
T 2ygw_A 256 AIFYSISLTQQGLQGVELGTFLIKRVVKELQREFPHL---------------------GVFSSLSPIPGFTKWLLGLL 312 (460)
T ss_dssp EEEEEEEESCGGGTTSCHHHHHHHHHHHHHHHHCTTC---------------------CEEEECBC-CCHHHHHHHHC
T ss_pred EEEEeecccccccccccchhHHHHHHHHHHHHhCcCc---------------------cceeecCCCccHHHHHHHHh
Confidence 3455666666555 5555555554444444443221 11123356788999986543
No 60
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=21.40 E-value=1.2e+02 Score=24.00 Aligned_cols=47 Identities=13% Similarity=0.229 Sum_probs=34.0
Q ss_pred eecC-CCCcccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhhhhcCC
Q psy2594 20 ECTP-NSKHRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGSMLAST 86 (117)
Q Consensus 20 l~GG-~s~~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggsila~l 86 (117)
+.|+ --.+|+|.+|+++-|+.++ | ..+|.+.... ..+=+||+++|..
T Consensus 413 vDGsv~~~yp~f~~~~~~~l~~l~----------------~-~~~v~l~~a~---DGSg~GAAliAa~ 460 (470)
T 3f9m_A 413 VDGSVYKLHPSFKERFHASVRRLT----------------P-SCEITFIESE---EGSGRGAALVSAV 460 (470)
T ss_dssp EECHHHHHCTTHHHHHHHHHHHHC----------------T-TEEEEEEECS---SHHHHHHHHHHHH
T ss_pred EeccHHHhCchHHHHHHHHHHHHc----------------C-CCeEEEEEcC---CCcHHHHHHHHHH
Confidence 4555 2358999999999999884 2 3467776665 3567899998864
No 61
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=20.07 E-value=70 Score=23.88 Aligned_cols=66 Identities=9% Similarity=0.001 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCCce--eecCCCC-cccHHHHHHHHHHhhHHHhhhhhhhccCCCCCCCceeEEEEeCCCcccchhhhhh
Q psy2594 5 VATRLKWLLNCPDEA--ECTPNSK-HRAKKTWLQRDIKRVVDARLKLSETLSGGYIKPKPIDVQVITHHMQRYAVWFGGS 81 (117)
Q Consensus 5 ~~~i~~si~~cp~d~--l~GG~s~-~~Gf~~RL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~aW~Ggs 81 (117)
...|.+.+.-.+++. |.||.+. .+-|.+++++.+.+..... ....+.|........+.-+||+
T Consensus 323 ~~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~--------------~~~~~~i~~s~l~~~a~~~GAa 388 (406)
T 1z6r_A 323 GRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPA--------------YSQHISVESTQFSNQGTMAGAA 388 (406)
T ss_dssp HHHHHHHHHHHCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHH--------------HHTTCEEEECSCCCCTTTTHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCccchhhHHHHHHHHHHHHHhcccc--------------cCCCcEEEEeCCCChHHHHHHH
Confidence 344555555555664 5555433 2445556666555542000 0012344444334456678887
Q ss_pred hhc
Q psy2594 82 MLA 84 (117)
Q Consensus 82 ila 84 (117)
++.
T Consensus 389 ~~~ 391 (406)
T 1z6r_A 389 LVK 391 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
Done!