BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2599
(78 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328714843|ref|XP_003245469.1| PREDICTED: ras-related protein Rab-28-like [Acyrthosiphon pisum]
Length = 223
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC +RY D++TRQY PT G +F+LK IQ V++ +WD G +N GL+ Y
Sbjct: 26 GKSCIVSRYCHDDYTRQYIPTCGVEFYLKRTQIQGHNVRINIWDTSGSSN----GLLSKY 81
Query: 72 LSSAN 76
+ +A+
Sbjct: 82 IYNAD 86
>gi|242013615|ref|XP_002427498.1| RAB-28, putative [Pediculus humanus corporis]
gi|212511893|gb|EEB14760.1| RAB-28, putative [Pediculus humanus corporis]
Length = 224
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + RY ++FTRQY+PT G DF LK LT+Q +R V L +WD+GG + S+ L+
Sbjct: 24 GKTSLVKRYCNNDFTRQYFPTVGVDFFLKRLTLQKSRNVTLKIWDVGGSSQNSN--LLDK 81
Query: 71 YLSSANI 77
Y+ +NI
Sbjct: 82 YIFGSNI 88
>gi|145494628|ref|XP_001433308.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834364|emb|CAI44525.1| rab_B48 [Paramecium tetraurelia]
gi|124400425|emb|CAK65911.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RY+++ FT QYY T G DF +++ I N+ VKL +WD G+ E L Y
Sbjct: 23 GKSCILMRYSENYFTSQYYNTIGVDFKTRVIKIGNQDVKLQIWDTAGQ--ERFKALTNNY 80
Query: 72 LSSA 75
A
Sbjct: 81 YRDA 84
>gi|322788802|gb|EFZ14370.1| hypothetical protein SINV_10021 [Solenopsis invicta]
Length = 722
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGG 58
G + ++ ++FTRQY PT+G DF LK +TI N+ V L LWD+GG
Sbjct: 507 GKTSIVQKFCNNDFTRQYVPTAGIDFFLKNITIGNNKNVNLHLWDVGG 554
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY ++ FT+ +Y T G DF +K + +Q + +KL +WD G+
Sbjct: 28 GKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQIWDTAGQ 75
>gi|145543689|ref|XP_001457530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834249|emb|CAI44495.1| rab_C45 [Paramecium tetraurelia]
gi|124425347|emb|CAK90133.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 6 IKVLTEGTS-----CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKA 60
IKV+T G S TR T+D+F+ Y T G DF +K L I N+ VKL +WD G+
Sbjct: 14 IKVITLGASGAGKTSLLTRMTRDQFSENYIATIGCDFAIKRLFINNQPVKLQIWDTAGQE 73
Query: 61 NESSAGLVKTYLSSAN 76
+A + K+Y AN
Sbjct: 74 RFRTA-ISKSYYRGAN 88
>gi|403367106|gb|EJY83362.1| GTP-binding protein ypt2 [Oxytricha trifallax]
Length = 174
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S RY +EFT QY T G DF +K L + R VKL +WD G+
Sbjct: 21 GKSSLMLRYCDNEFTEQYLATIGVDFKIKALEVNGRQVKLQIWDTAGQ 68
>gi|156543810|ref|XP_001606519.1| PREDICTED: ras-related protein Rab-28-like [Nasonia vitripennis]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + + ++ DEF+RQY PT+G DF LK L++ + V L LWD+ G A + ++
Sbjct: 24 GKTSIAVKFCNDEFSRQYSPTAGIDFFLKNLSLGIYKNVNLHLWDVSGLALRGN--MLDK 81
Query: 71 YLSSANI 77
Y+ ANI
Sbjct: 82 YVYEANI 88
>gi|145509727|ref|XP_001440802.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834486|emb|CAI44560.1| rab_A48 [Paramecium tetraurelia]
gi|124408030|emb|CAK73405.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RY+++ FT QYY T G DF +++ I + VKL +WD G+ E L Y
Sbjct: 23 GKSCILMRYSENYFTSQYYNTIGVDFKTRVIKIGHLNVKLQIWDTAGQ--ERFKALTNNY 80
Query: 72 LSSAN 76
A+
Sbjct: 81 YRDAH 85
>gi|281210797|gb|EFA84963.1| hypothetical protein PPL_01956 [Polysphondylium pallidum PN500]
Length = 795
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L + L G + R+ DEF +Y PT G DFH K + + N V L LWDI G+ E
Sbjct: 18 LVVGKLACGKTSIIQRFCHDEFQSKYKPTIGVDFHTKEMEVMNIKVILQLWDIAGQ--ER 75
Query: 64 SAGLVKTYLSSAN 76
+ + Y +A+
Sbjct: 76 FGHMTRVYFQNAD 88
>gi|229593818|ref|XP_001026663.2| Ras family protein [Tetrahymena thermophila]
gi|225567282|gb|EAS06418.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777760|dbj|BAJ21276.1| Rab-family small GTPase Rab1D [Tetrahymena thermophila]
Length = 223
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY++++FT +Y T G DF +K L ++++ +KL +WD G+
Sbjct: 31 GKTCMLMRYSENQFTYNFYNTIGVDFKIKALRLEDKNIKLQIWDTAGQ 78
>gi|383856774|ref|XP_003703882.1| PREDICTED: ras-related protein Rab-28-like [Megachile rotundata]
Length = 238
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
G + + ++ +EFTRQY PTSG DF LK ++I + V L LWD+GG A
Sbjct: 24 GKTSIAQKFCNNEFTRQYTPTSGIDFFLKNISIGYYKNVNLHLWDVGGLA 73
>gi|328791722|ref|XP_001120659.2| PREDICTED: ras-related protein Rab-28-like [Apis mellifera]
Length = 182
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + + ++ +EFTRQY PTSG DF LK +++ + V L LWD+GG A ++
Sbjct: 24 GKTSIAQKFCNNEFTRQYTPTSGIDFFLKNISVGYYKNVNLHLWDVGGLA--LHGNMLDK 81
Query: 71 YLSSANI 77
Y+ A+I
Sbjct: 82 YIFGAHI 88
>gi|145508774|ref|XP_001440331.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831449|emb|CAI39308.1| rab_C36 [Paramecium tetraurelia]
gi|124407548|emb|CAK72934.1| unnamed protein product [Paramecium tetraurelia]
Length = 184
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RY DEF ++PT G DF LK L + +KL +WD G+ E +V +Y
Sbjct: 19 GKSSLILRYCNDEFKEDFFPTIGVDFKLKQLEFNGKAIKLQIWDTAGQ--ERFMTIVSSY 76
Query: 72 LSSAN 76
A+
Sbjct: 77 YKGAH 81
>gi|290561803|gb|ADD38299.1| Ras-related protein Rab-32 [Lepeophtheirus salmonis]
Length = 308
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
+ I + G S F R+ D F YY T G DFHLK+L ++ V+L LWDI G+ E
Sbjct: 21 IVIGEVNSGKSAFIRRFIDDSFCENYYATVGVDFHLKVLQFKKDLEVRLQLWDIAGQ--E 78
Query: 63 SSAGLVKTYLSSA 75
+ + + Y +
Sbjct: 79 RFSKMTRAYFKGS 91
>gi|380028583|ref|XP_003697974.1| PREDICTED: ras-related protein Rab-28-like [Apis florea]
Length = 239
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
G + + ++ +EFTRQY PTSG DF LK +++ + V L LWD+GG A
Sbjct: 24 GKTSIAQKFCNNEFTRQYTPTSGIDFFLKNISVGYYKNVNLHLWDVGGLA 73
>gi|350412962|ref|XP_003489831.1| PREDICTED: ras-related protein Rab-28-like [Bombus impatiens]
Length = 239
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
G + + ++ +EFTRQY PTSG DF LK + + + V L LWD+GG A
Sbjct: 24 GKTSIAQKFCNNEFTRQYTPTSGIDFFLKNVNVGFYKNVNLHLWDVGGLA 73
>gi|145535806|ref|XP_001453636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421358|emb|CAK86239.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++++FT +Y T G DF +K+ I VKL +WD G+
Sbjct: 27 GKSCMLMRFSENQFTNHFYNTIGVDFKIKVFQIDKSTVKLQIWDTAGQ 74
>gi|390358358|ref|XP_789541.3| PREDICTED: ras-related protein Rab-28-like [Strongylocentrotus
purpuratus]
Length = 224
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
G + +TRY+Q++F +QY T G DF LK + I N V L +WDIGG+
Sbjct: 26 GKTSLATRYSQEQFGKQYQQTVGLDFFLKRICIADNTHVSLQVWDIGGQ 74
>gi|340502771|gb|EGR29423.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 207
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY +++FT ++Y T G DF K L I ++ +KL +WD G+
Sbjct: 21 GKTCMVMRYCENQFTNEFYATIGVDFKTKNLQIDDKIIKLQIWDTAGQ 68
>gi|145518399|ref|XP_001445075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412512|emb|CAK77678.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY++++FT +Y T G DF K + I VKL +WD G+
Sbjct: 22 GKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWDTAGQ 69
>gi|145545648|ref|XP_001458508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834260|emb|CAI44498.1| rab_C41 [Paramecium tetraurelia]
gi|124426328|emb|CAK91111.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY++++FT +Y T G DF K + I VKL +WD G+
Sbjct: 22 GKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGENNVKLQIWDTAGQ 69
>gi|74831253|emb|CAI39271.1| rab_C85 [Paramecium tetraurelia]
Length = 219
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY++++FT +Y T G DF K + I VKL +WD G+
Sbjct: 22 GKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWDTAGQ 69
>gi|307169869|gb|EFN62378.1| Ras-related protein Rab-28 [Camponotus floridanus]
Length = 238
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
G + ++ ++FTRQY PT+G DF LK +TI + V L LWD+GG A
Sbjct: 24 GKTSIVQKFCNNDFTRQYVPTAGIDFFLKNITIGCYKNVNLHLWDVGGLA 73
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKA 60
G S T++T+DEF Q PT G DF +K + + + VKL ++D G A
Sbjct: 21 GKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGNA 69
>gi|340375477|ref|XP_003386261.1| PREDICTED: hypothetical protein LOC100637165 [Amphimedon
queenslandica]
Length = 472
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVK 69
T G SC R+TQ + PT G DFH K++ + +KL LWD G+ E + +
Sbjct: 27 TVGKSCLLRRFTQGRWIEHNDPTVGVDFHTKMVQVDGHNLKLQLWDTAGQ--ERFRAITR 84
Query: 70 TYLSSA 75
+Y +A
Sbjct: 85 SYFRNA 90
>gi|328716362|ref|XP_003245910.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Acyrthosiphon pisum]
Length = 260
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLV 68
T G + F RY Q F+R+Y T G DF LK++ + + +KL LWDI G+ E +
Sbjct: 74 TVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKLQLWDIAGQ--ERFTWMT 131
Query: 69 KTYLSSAN 76
+ Y A+
Sbjct: 132 RVYYKDAH 139
>gi|340506305|gb|EGR32473.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 211
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++++FT +Y T G DF +K + + + +KL +WD G+
Sbjct: 24 GKSCMLMRFSENQFTNNFYNTIGVDFKIKTIQLNGKNIKLQIWDTAGQ 71
>gi|307191675|gb|EFN75149.1| Ras-related protein Rab-28 [Harpegnathos saltator]
Length = 238
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGKANESSAGLVKT 70
G + ++ ++F RQY PT+G DF LK LTI + V L LWD+GG A + ++
Sbjct: 24 GKTSIVQKFCNNDFARQYVPTAGIDFFLKNLTIGGCKNVNLHLWDVGGLALHGN--MLDK 81
Query: 71 YLSSANI 77
Y+ A+I
Sbjct: 82 YIFGAHI 88
>gi|340503276|gb|EGR29879.1| Ras-related gtp-binding protein, putative [Ichthyophthirius
multifiliis]
Length = 224
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
T G +C + R+ D+F+ + T G DF LK L IQ + +KL +WD G+
Sbjct: 21 TVGKTCIALRFCDDKFSLSHTNTVGIDFQLKYLEIQGKKIKLQIWDTAGQ 70
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
>gi|225709988|gb|ACO10840.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 321
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G S F RYT F Y T G DFHLK++ ++ N ++L LWDI G+ E + + +
Sbjct: 29 GKSAFIRRYTDGSFAENYLATVGVDFHLKVIQLEHNVEIRLQLWDIAGQ--ERFSRMTRA 86
Query: 71 YLSSA 75
Y + +
Sbjct: 87 YFTGS 91
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T D F PT G DF K+LT+ + VKL +WD G+
Sbjct: 19 GKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWDTAGQ 66
>gi|145524900|ref|XP_001448272.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833759|emb|CAI39349.1| rab_B04 [Paramecium tetraurelia]
gi|124415816|emb|CAK80875.1| unnamed protein product [Paramecium tetraurelia]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G SC RYT+DEF +Y T G +F K + I QN +KL +WD G+ ES +V++
Sbjct: 23 GKSCLLLRYTKDEFVSEYNVTIGVEFSSKTVEIDQNSKIKLQIWDTAGQ--ESFRSIVRS 80
Query: 71 Y 71
+
Sbjct: 81 F 81
>gi|291227891|ref|XP_002733914.1| PREDICTED: RAB28, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 223
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TRY+Q++F RQY T G DF LK L + N V L +WDIGG+
Sbjct: 24 GKTSLATRYSQEQFGRQYKQTVGLDFFLKRLILPGNVHVTLQVWDIGGQ 72
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
>gi|332017230|gb|EGI58013.1| Ras-related protein Rab-28 [Acromyrmex echinatior]
Length = 239
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGKA 60
G + ++ ++FTRQY PT+G DF LK ++I + + V L LWD+GG A
Sbjct: 24 GKTSIVQKFCNNDFTRQYIPTAGIDFFLKNISIGSYKNVNLHLWDVGGLA 73
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + +PT G DF K +TI + ++L LWD G+ E L+ +Y
Sbjct: 33 GKTCIIERFMYDVFDEKSHPTIGVDFLAKTITIDEKSIRLQLWDTAGQ--ERFRSLIPSY 90
Query: 72 LSSA 75
L A
Sbjct: 91 LRDA 94
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS
4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS
4309]
Length = 218
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +++F + T G DF +K L IQ R +KL LWD G+
Sbjct: 38 GKSCLLVRFVENKFNPSFITTIGIDFKIKTLDIQGRKIKLQLWDTAGQ 85
>gi|403366301|gb|EJY82950.1| Small GTP-binding protein domain-containing protein [Oxytricha
trifallax]
Length = 174
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S RY DEF QY T G D+ +K L + R VKL +WD G+
Sbjct: 21 GKSSLMLRYFDDEFREQYLATIGVDYKIKALEVNGRQVKLQIWDTAGQ 68
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT Y T G DF ++ + ++ R VKL +WD G+
Sbjct: 20 GKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQIWDTAGQ 67
>gi|307777904|dbj|BAJ21348.1| Rab-family small GTPase RabX3B [Tetrahymena thermophila]
Length = 212
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RY++++F Y T G +F K++ I + VKL +WD G+ ES +VK++
Sbjct: 14 GKSCMLIRYSKNDFVTDYNATIGVEFQSKIVKINDASVKLQIWDTAGQ--ESFRSIVKSF 71
>gi|123493606|ref|XP_001326325.1| Ras-like GTP-binding protein RYL1 [Trichomonas vaginalis G3]
gi|62736308|gb|AAX97483.1| small Rab GTPase RabX5 [Trichomonas vaginalis]
gi|121909238|gb|EAY14102.1| Ras-like GTP-binding protein RYL1, putative [Trichomonas
vaginalis G3]
Length = 209
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ +D+F + T G DF ++ +TI + VKL +WD G+ E + K Y
Sbjct: 19 GKSCLLLRFAEDKFNENFLTTIGIDFKVRKVTIDDAKVKLQIWDTAGQ--EKFRTITKAY 76
Query: 72 LSSAN 76
AN
Sbjct: 77 YRGAN 81
>gi|225719646|gb|ACO15669.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG--VKLILWDIGGKAN 61
L I+ + G S + RYT+ F+ Y T G DFHLK+L + RG ++L LWDI G+
Sbjct: 21 LVIRDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLL-RGLEIRLQLWDIAGQ-- 77
Query: 62 ESSAGLVKTYL 72
E + + + Y
Sbjct: 78 ERFSKMTRAYF 88
>gi|145493011|ref|XP_001432502.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831508|emb|CAI39319.1| rab_A65 [Paramecium tetraurelia]
gi|124399614|emb|CAK65105.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY++++FT +Y T G DF K + + VKL +WD G+
Sbjct: 31 GKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQIWDTAGQ 78
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium
muris RN66]
Length = 203
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ +T++N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWDTAGQ 67
>gi|145495635|ref|XP_001433810.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831504|emb|CAI39318.1| rab_B65 [Paramecium tetraurelia]
gi|124400930|emb|CAK66413.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY++++FT +Y T G DF K + + VKL +WD G+
Sbjct: 31 GKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQIWDTAGQ 78
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF +K + I N+ +KL +WD G+
Sbjct: 23 GKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKLQIWDTAGQ 70
>gi|330841763|ref|XP_003292861.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
gi|325076873|gb|EGC30626.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
Length = 206
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T + F Q T G DF K++ IQ R VKL +WD G+
Sbjct: 19 GKSCLLHRFTDNRFKSQSSHTIGVDFASKIIDIQGRAVKLQIWDTAGQ 66
>gi|17550768|ref|NP_508523.1| Protein TAG-312 [Caenorhabditis elegans]
gi|74966415|sp|Q22908.2|RASEF_CAEEL RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
gi|373254121|emb|CCD66473.1| Protein TAG-312 [Caenorhabditis elegans]
Length = 656
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R + +FT Q T G DFH+K + + R V L LWD G+ E L K+Y
Sbjct: 473 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ--ERFRSLCKSY 530
Query: 72 LSSAN 76
A+
Sbjct: 531 FRRAD 535
>gi|268578667|ref|XP_002644316.1| C. briggsae CBR-TAG-312 protein [Caenorhabditis briggsae]
gi|74790193|sp|Q619T5.1|RASEF_CAEBR RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
Length = 634
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R + +FT Q T G DFH+K + + R V L LWD G+ E L K+Y
Sbjct: 451 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ--ERFRSLCKSY 508
Query: 72 LSSAN 76
A+
Sbjct: 509 FRRAD 513
>gi|399163173|gb|AFP33162.1| rab-45, partial [Caenorhabditis elegans]
Length = 633
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R + +FT Q T G DFH+K + + R V L LWD G+ E L K+Y
Sbjct: 450 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ--ERFRSLCKSY 507
Query: 72 LSSAN 76
A+
Sbjct: 508 FRRAD 512
>gi|341874611|gb|EGT30546.1| CBN-TAG-312 protein [Caenorhabditis brenneri]
Length = 632
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R + +FT Q T G DFH+K + + R V L LWD G+ E L K+Y
Sbjct: 449 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ--ERFRSLCKSY 506
Query: 72 LSSAN 76
A+
Sbjct: 507 FRRAD 511
>gi|308512109|ref|XP_003118237.1| CRE-TAG-312 protein [Caenorhabditis remanei]
gi|308238883|gb|EFO82835.1| CRE-TAG-312 protein [Caenorhabditis remanei]
Length = 650
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R + +FT Q T G DFH+K + + R V L LWD G+ E L K+Y
Sbjct: 467 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ--ERFRSLCKSY 524
Query: 72 LSSAN 76
A+
Sbjct: 525 FRRAD 529
>gi|326435833|gb|EGD81403.1| hypothetical protein PTSG_02125 [Salpingoeca sp. ATCC 50818]
Length = 442
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLV 68
+ G + TRY QD F Y T G DF LK + + +++ V + LWD+GG++ ++
Sbjct: 18 STGKTSIITRYCQDAFAPAYNQTVGLDFFLKRVDLPKDKHVTMQLWDVGGQS--IGGKML 75
Query: 69 KTYLSSANI 77
KTYL +A +
Sbjct: 76 KTYLENAQV 84
>gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila]
gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210]
Length = 681
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RY++++F Y T G +F K++ I + VKL +WD G+ ES +VK++
Sbjct: 478 GKSCMLIRYSKNDFVTDYNATIGVEFQSKIVKINDASVKLQIWDTAGQ--ESFRSIVKSF 535
>gi|70953492|ref|XP_745844.1| Rab1 protein [Plasmodium chabaudi chabaudi]
gi|56526291|emb|CAH76774.1| Rab1 protein, putative [Plasmodium chabaudi chabaudi]
Length = 207
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + L + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDTAGQ 71
>gi|340500595|gb|EGR27462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 169
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + +PT G DF K L I ++ ++L LWD G+ E L+ +Y
Sbjct: 31 GKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLQLWDTAGQ--ERFRSLIPSY 88
Query: 72 LSSA 75
L A
Sbjct: 89 LRDA 92
>gi|403362358|gb|EJY80906.1| Ras-related gtp-binding protein [Oxytricha trifallax]
Length = 224
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +CF R+ D FT + T G DF +K + I + VKL +WD G+ E + +TY
Sbjct: 23 GKTCFLLRFADDNFTSSHISTIGIDFKIKTINIDGKNVKLQIWDTAGQ--ERFRTITQTY 80
Query: 72 LSSA 75
A
Sbjct: 81 YKGA 84
>gi|118386344|ref|XP_001026291.1| Ras family protein [Tetrahymena thermophila]
gi|89308058|gb|EAS06046.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777822|dbj|BAJ21307.1| Rab-family small GTPase RabX12 [Tetrahymena thermophila]
Length = 233
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 4 LYIKVL-----TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
++IK++ G +C RY++D+F PT G DF KLL + + ++L LWDI G
Sbjct: 5 VFIKIIVVGEQNVGKTCILARYSRDQFDTTCPPTLGMDFQSKLLEYKGKTIRLQLWDIAG 64
Query: 59 KANESSAGLVKTYLSSA 75
+ E + K Y+ A
Sbjct: 65 Q--ERYNSVSKLYVRGA 79
>gi|83315332|ref|XP_730748.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490566|gb|EAA22313.1| Rab1 protein [Plasmodium yoelii yoelii]
Length = 207
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + L + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDTAGQ 71
>gi|158343285|gb|ABW35315.1| Rab1A1 [Gymnochlora stellata]
gi|193875838|gb|ACF24555.1| Ras-related small GTPase Rab 1a [Gymnochlora stellata]
Length = 207
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + L I + VKL +WD G+
Sbjct: 28 GKSCLLLRFADDSFTDSYISTIGVDFRFRTLKINKKTVKLQIWDTAGQ 75
>gi|307777884|dbj|BAJ21338.1| Rab-family small GTPase RabX25 [Tetrahymena thermophila]
Length = 227
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + F R+++D+F + + G DF + L +QN+ +KL +WD G+ N S + K Y
Sbjct: 38 GKTSFLIRFSEDQFLKNVNTSVGIDFRFRSLILQNKQIKLKIWDTAGQENFRS--ISKKY 95
Query: 72 LSSAN 76
A+
Sbjct: 96 FQKAD 100
>gi|145509136|ref|XP_001440512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407729|emb|CAK73115.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++++F +Y T G DF +K+ I VKL +WD G+
Sbjct: 24 GKSCMLMRFSENQFRNHFYNTIGVDFKIKVFQIDRSTVKLQIWDTAGQ 71
>gi|340505510|gb|EGR31830.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 337
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RYT++EF Y T G +F K + I + VKL +WD G+ ES ++K++
Sbjct: 145 GKSCLLIRYTKNEFASDYNATIGVEFQSKTIKISDAQVKLQIWDTAGQ--ESFRSIIKSF 202
>gi|440297033|gb|ELP89763.1| hypothetical protein EIN_424850 [Entamoeba invadens IP1]
Length = 209
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + RYT D F Y PT G DF K + I + +KL +WD G +E +V TY
Sbjct: 29 GKTSLLCRYTDDAFNPVYVPTIGVDFKFKTIEIDKKQIKLQMWDTAG--SERFKAIVTTY 86
Query: 72 LSSAN 76
++
Sbjct: 87 FKGSH 91
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+FT + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLWDTAGQ 79
>gi|290997916|ref|XP_002681527.1| rab family small GTPase [Naegleria gruberi]
gi|284095151|gb|EFC48783.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S T++T+DEF Q PT G DF +K + + + VKL ++D G+
Sbjct: 8 GKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGQ 55
>gi|403223777|dbj|BAM41907.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 210
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + N+ +KL +WD G+
Sbjct: 24 GKSCLLLRFADDSFTDSYITTIGVDFRFRTVIVNNKRIKLQIWDTAGQ 71
>gi|312080726|ref|XP_003142724.1| small GTP binding protein RAB28 [Loa loa]
gi|307762116|gb|EFO21350.1| small GTP binding protein RAB28 [Loa loa]
Length = 226
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + R+ QD F RQY T G DF + LT+ N V L +WDIGG++ S +++
Sbjct: 23 GKTSLCARFAQDNFGRQYQQTVGLDFFTRRLTLPGNVSVLLQIWDIGGQSIASP--MLEK 80
Query: 71 YLSSAN 76
Y+S A+
Sbjct: 81 YISGAH 86
>gi|193631807|ref|XP_001951808.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Acyrthosiphon pisum]
Length = 201
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLV 68
T G + F RY Q F+R+Y T G DF LK++ + + +KL LWDI G+ E +
Sbjct: 15 TVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKLQLWDIAGQ--ERFTWMT 72
Query: 69 KTYLSSAN 76
+ Y A+
Sbjct: 73 RVYYKDAH 80
>gi|145476227|ref|XP_001424136.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833844|emb|CAI39375.1| rab_A04 [Paramecium tetraurelia]
gi|124391199|emb|CAK56738.1| unnamed protein product [Paramecium tetraurelia]
Length = 217
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G SC RYT+DEF +Y T G +F K + + QN +KL +WD G+ ES +V++
Sbjct: 23 GKSCLLLRYTKDEFLSEYNVTIGVEFSSKTVEVDQNTKIKLQIWDTAGQ--ESFRSIVRS 80
Query: 71 Y 71
+
Sbjct: 81 F 81
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + N VKL +WD G+
Sbjct: 25 GKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQ 72
>gi|237831479|ref|XP_002365037.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962701|gb|EEA97896.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487113|gb|EEE25359.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
gi|221506799|gb|EEE32416.1| rab12, putative [Toxoplasma gondii VEG]
Length = 238
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + N VKL +WD G+
Sbjct: 46 GKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQ 93
>gi|330791055|ref|XP_003283610.1| Rab GTPase [Dictyostelium purpureum]
gi|325086470|gb|EGC39859.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L + L G + RY + F +Y PT G DF KLL I + V L LWDI G+ E
Sbjct: 17 LVVGKLACGKTSIIQRYCHNHFQPKYKPTIGVDFQQKLLEIMGQKVLLQLWDIAGQ--ER 74
Query: 64 SAGLVKTYLSSAN 76
+ + Y +A+
Sbjct: 75 FGHMTRVYFQNAH 87
>gi|260809841|ref|XP_002599713.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
gi|229284994|gb|EEN55725.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
Length = 168
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
L I T G + F RY D F R+Y T G DF LK++ I + V+ LWD+ G+ E
Sbjct: 9 LIIGDATVGKTSFVQRYVNDSFKREYKATVGVDFALKVIQISEEDTVRFQLWDVAGQ--E 66
Query: 63 SSAGLVKTYLSSAN 76
+ + Y A+
Sbjct: 67 RFTSMTRVYYKDAS 80
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D F+ Y T G DF +K L I R +KL +WD G+
Sbjct: 20 GKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWDTAGQ 67
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ ++++N+ VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 68
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F+ + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|407038223|gb|EKE39000.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 187
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D F+ Y T G DF +K L I R +KL +WD G+
Sbjct: 8 GKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWDTAGQ 55
>gi|340500436|gb|EGR27313.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + +PT G DF K L + ++ ++L LWD G+ E L+ +Y
Sbjct: 32 GKTCIIERFMYDVFDEKSHPTVGVDFLAKTLHVDDKTIRLQLWDTAGQ--ERFRSLIPSY 89
Query: 72 LSSA 75
L A
Sbjct: 90 LRDA 93
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKTVKLQIWDTAGQ 67
>gi|340373098|ref|XP_003385079.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 219
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C +R+ +EF + T G DF LKL TI+++ +++ +WD G+
Sbjct: 24 GKTCLISRFADNEFRHTHINTIGIDFKLKLFTIRDKKIRMQIWDTAGQ 71
>gi|409046611|gb|EKM56091.1| hypothetical protein PHACADRAFT_257157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIDLEGKTVKLQIWDTAGQ 67
>gi|330791931|ref|XP_003284044.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
gi|330827546|ref|XP_003291835.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325077958|gb|EGC31637.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325085973|gb|EGC39370.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
Length = 208
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T + F Q T G DF +++ IQ R VKL +WD G+
Sbjct: 19 GKSCLLHRFTDNRFKSQSSHTIGVDFASRIIDIQGRAVKLQIWDTAGQ 66
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium
parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ ++++N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 67
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 6 IKVLTEGTSC-----FSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
+K+L G SC R+T+D F ++ T G DF +K +T+Q VKL +WD G+
Sbjct: 12 LKLLIIGESCVGKSSLQLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 70
>gi|198427845|ref|XP_002120167.1| PREDICTED: similar to RAB12, member RAS oncogene family [Ciona
intestinalis]
Length = 223
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +CF RYT D F + T G DF +K +T+ R ++L +WD G+
Sbjct: 38 GKTCFLERYTDDLFREESKSTVGIDFRIKTVTVGGRRIRLQIWDTAGQ 85
>gi|240849344|ref|NP_001155696.1| RAB18B, member RAS oncogene family-like [Acyrthosiphon pisum]
gi|328718584|ref|XP_003246519.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon
pisum]
gi|328718586|ref|XP_003246520.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon
pisum]
gi|239789319|dbj|BAH71290.1| ACYPI007125 [Acyrthosiphon pisum]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T D F T G DF ++ +T+ N +KL LWD G+
Sbjct: 20 GKSCLLCRFTDDTFNVDNAVTIGVDFKMRKITVDNNNIKLALWDTAGQ 67
>gi|225719728|gb|ACO15710.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 164
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG--VKLILWDIGGK 59
L I + G S + RYT+ F+ Y T G DFHLK+L + RG ++L LWDI G+
Sbjct: 21 LVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLL-RGLEIRLQLWDIAGQ 77
>gi|405978593|gb|EKC42971.1| Ras-related protein Rab-28 [Crassostrea gigas]
Length = 222
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TRY+Q++F R Y T G DF LK + + N V L +WDIGG+
Sbjct: 24 GKTSLATRYSQEQFGRNYVQTIGVDFFLKRIVLPGNVHVALQVWDIGGQ 72
>gi|149394773|gb|ABR27273.1| Rab A61 [Nyctotherus ovalis]
Length = 206
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY ++ FT ++ T G DF +K T+ ++ +KL +WD G+
Sbjct: 24 GKSCLLMRYAENTFTENFFNTIGVDFKIKTTTLDSKIIKLQIWDTAGQ 71
>gi|68063113|ref|XP_673566.1| GTPase [Plasmodium berghei strain ANKA]
gi|56491507|emb|CAH96785.1| GTPase, putative [Plasmodium berghei]
Length = 83
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + L + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDTAGQ 71
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS
421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS
421]
Length = 207
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 25 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 72
>gi|145536137|ref|XP_001453796.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831462|emb|CAI39310.1| rab_C28 [Paramecium tetraurelia]
gi|124421529|emb|CAK86399.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G SC RY +D+FT +Y T G +F K++ + QN VKL +WD G+ ES +V++
Sbjct: 21 GKSCLLMRYMKDDFTTEYNVTIGVEFLSKIVKVDQNTQVKLQIWDTAGQ--ESFRSVVRS 78
Query: 71 Y 71
+
Sbjct: 79 F 79
>gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578226|gb|ABO96291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D+FT + T G DF +K + I + VKL +WD G+
Sbjct: 18 GKSCLLLRFSDDQFTTSFITTIGIDFKIKTVEIDGKRVKLQIWDTAGQ 65
>gi|439556|gb|AAA57064.1| guanine nucleotide regulatory protein [Paramecium tetraurelia]
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 14 SCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
SC RY++++FT +Y T G DF K + I VKL +WD G+
Sbjct: 2 SCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWDTAGQ 47
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I + VKL +WD G+
Sbjct: 27 GKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 74
>gi|168057732|ref|XP_001780867.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162667723|gb|EDQ54346.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 210
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F + Y PT G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSIITRFMYDKFDQTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+FT + T G DF ++ + I N+ VKL +WD G+
Sbjct: 23 GKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQ 70
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS
2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS
2517]
Length = 206
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F+ + T G DF +K + I + VKL LWD G+
Sbjct: 23 GKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 70
>gi|4585808|emb|CAB40900.1| putative Rab1A protein [Plasmodium falciparum]
Length = 207
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDTAGQ 71
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIWDTAGQ 67
>gi|225717948|gb|ACO14820.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG--VKLILWDIGGKAN 61
L I + G S + RYT+ F+ Y T G DFHLK+L + RG ++L LWDI G+
Sbjct: 21 LVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLL-RGLEIRLQLWDIAGQ-- 77
Query: 62 ESSAGLVKTYL 72
E + + + Y
Sbjct: 78 ERFSKMTRAYF 88
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|124506197|ref|XP_001351696.1| PfRab1a [Plasmodium falciparum 3D7]
gi|6525224|gb|AAF15358.1|AF201953_1 Rab1 protein [Plasmodium falciparum]
gi|23504624|emb|CAD51503.1| PfRab1a [Plasmodium falciparum 3D7]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDTAGQ 71
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS
2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS
2517]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F+ + T G DF +K + I + +KL LWD G+
Sbjct: 28 GKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLWDTAGQ 75
>gi|428185803|gb|EKX54655.1| hypothetical protein GUITHDRAFT_100130 [Guillardia theta
CCMP2712]
Length = 170
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKA 60
T G + + R+T DEF +QY T G DF L+ L + N V L +WDIGG++
Sbjct: 21 TVGKTSIAMRFTNDEFGQQYKQTIGVDFMLRRLELPGNTRVALQIWDIGGQS 72
>gi|225718210|gb|ACO14951.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 194
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLL-TIQNRGVKLILWDIGGKANE 62
L I + G S + RYT+ F+ Y T G DFHLK+L ++ ++L LWDI G+ E
Sbjct: 21 LVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAGQ--E 78
Query: 63 SSAGLVKTYLSSA 75
+ + + Y +
Sbjct: 79 RFSKMTRAYFKGS 91
>gi|45201075|ref|NP_986645.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|44985858|gb|AAS54469.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|374109896|gb|AEY98801.1| FAGL021Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F+ + T G DF +K + I + +KL LWD G+
Sbjct: 31 GKSCLLVRFVEDKFSPSFITTIGIDFKIKAVDINGKKIKLQLWDTAGQ 78
>gi|32492048|gb|AAP85296.1| Rab1a [Babesia bovis]
Length = 214
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + ++ R VKL +WD G+
Sbjct: 24 GKSCVLLRFADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQIWDTAGQ 71
>gi|225709744|gb|ACO10718.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G S F RYT F Y T G DFHLK + ++ N ++L LWDI G+ E + + +
Sbjct: 29 GKSAFIRRYTDGSFAENYLATVGVDFHLKDIQLEHNVEIRLQLWDIAGQ--ERFSRMTRA 86
Query: 71 YLSSA 75
Y + +
Sbjct: 87 YFTGS 91
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|449543332|gb|EMD34308.1| hypothetical protein CERSUDRAFT_117186 [Ceriporiopsis
subvermispora B]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIWDTAGQ 67
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D+FT + T G DF +K + + + VK+ +WD G+
Sbjct: 26 GKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDLDQKKVKMQIWDTAGQ 73
>gi|403372762|gb|EJY86287.1| Rab family GTPase [Oxytricha trifallax]
Length = 223
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+++D F + PT G DF +K + + ++ VKL +WD G+ E + +TY
Sbjct: 24 GKTCLLLRFSEDSFPVSHMPTIGIDFKIKKINVDDKRVKLQVWDTAGQ--ERFRTITQTY 81
Query: 72 LSSA 75
A
Sbjct: 82 YKGA 85
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|149241639|pdb|2EQB|A Chain A, Crystal Structure Of The Rab Gtpase Sec4p, The Sec2p Gef
Domain, And Phosphate Complex
Length = 174
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 19 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 66
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor
of RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|429329505|gb|AFZ81264.1| Ras related Rab1a small GTP-binding protein [Babesia equi]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCLLLRFADDSFTDSYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQ 71
>gi|1613773|gb|AAB16753.1| Rab1 [Plasmodium falciparum]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDTAGQ 71
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T D F PT G DF LK LT+ + +KL +WD G+
Sbjct: 20 GKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTIWDTAGQ 67
>gi|134105123|pdb|2OCY|C Chain C, Complex Of The Guanine Exchange Factor Sec2p And The Rab
Gtpase Sec4p
Length = 170
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 15 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 62
>gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena thermophila]
gi|146142676|gb|EAR82398.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777804|dbj|BAJ21298.1| Rab-family small GTPase Rab6D [Tetrahymena thermophila]
Length = 265
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + +PT G DF K L I ++ ++L LWD G+ E L+ +Y
Sbjct: 32 GKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLSLWDTAGQ--ERFRSLIPSY 89
Query: 72 LSSA 75
L A
Sbjct: 90 LRDA 93
>gi|300120787|emb|CBK21029.2| unnamed protein product [Blastocystis hominis]
Length = 188
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RY Q F+ ++Y T G D+ K+ TI ++ +L +WD G+ E + K+Y
Sbjct: 18 GKTCLLNRYIQGTFSSEFYTTIGIDYRTKIETIDDKVCRLEVWDTAGQ--ERFRAITKSY 75
Query: 72 L 72
L
Sbjct: 76 L 76
>gi|209733696|gb|ACI67717.1| Ras-related protein Rab-28 [Salmo salar]
Length = 82
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I V+ +G S +TR+ Q+ F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 13 LKIVVIGDGASGKTSLATRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQ 72
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQ 68
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + I+++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS
4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS
4309]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 28 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 75
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + I+++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + I+++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQ 67
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|156095566|ref|XP_001613818.1| small GTPase Rab1 [Plasmodium vivax Sal-1]
gi|148802692|gb|EDL44091.1| small GTPase Rab1, putative [Plasmodium vivax]
Length = 207
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRRIKVGDKMVKLQIWDTAGQ 71
>gi|407409243|gb|EKF32227.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi
marinkellei]
Length = 283
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F +QY T G DF K + + NR V+L +WD G+ E L+ +Y
Sbjct: 53 GKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTAGQ--ERFRSLIPSY 110
Query: 72 LSSAN 76
+ +++
Sbjct: 111 IRNSS 115
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC +R+T+D+F+ + PT G +F K + I ++ +K +WD G+
Sbjct: 1111 GKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQ 1158
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 1 MAPLYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
M L I G SC R+ +D+F+ + T G DF +K + I + +KL LWD G+
Sbjct: 15 MKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKIKLQLWDTAGQ 73
>gi|432876709|ref|XP_004073074.1| PREDICTED: ras-related protein Rab-28-like [Oryzias latipes]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +++ N+ V L +WDIGG+
Sbjct: 24 GKTSLATRFAQESFGKQYKQTIGLDFFLKRISLPGNQNVTLQVWDIGGQ 72
>gi|367007798|ref|XP_003688628.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS
4417]
gi|357526938|emb|CCE66194.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS
4417]
Length = 214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D+F + T G DF +K + I R +KL LWD G+
Sbjct: 31 GKSCLLVRFVDDKFNPSFITTIGIDFKIKTVEINGRKIKLQLWDTAGQ 78
>gi|340387066|ref|XP_003392029.1| PREDICTED: ras-like GTP-binding protein YPT1-like, partial
[Amphimedon queenslandica]
Length = 104
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SCF TR + FT +Y T G DF+ + L I ++ V L WD G+ E + K Y
Sbjct: 20 GKSCFLTRLCTNTFTTKYASTIGVDFYSRALVIDDKTVALQFWDTAGQ--ERFQSVTKAY 77
Query: 72 LSSAN 76
A+
Sbjct: 78 YRGAD 82
>gi|323446136|gb|EGB02421.1| hypothetical protein AURANDRAFT_35265 [Aureococcus
anophagefferens]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 29 GKTCIINRFVYDSFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 86
Query: 72 LSSANIS 78
+ ++++
Sbjct: 87 IRDSSVA 93
>gi|156088917|ref|XP_001611865.1| Rab1a [Babesia bovis]
gi|154799119|gb|EDO08297.1| Rab1a [Babesia bovis]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + ++ R VKL +WD G+
Sbjct: 24 GKSCVLLRFADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQIWDTAGQ 71
>gi|401842530|gb|EJT44700.1| SEC4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 115
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQ 67
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|118356223|ref|XP_001011370.1| Ras family protein [Tetrahymena thermophila]
gi|89293137|gb|EAR91125.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777752|dbj|BAJ21272.1| Rab-family small GTPase Rab1E [Tetrahymena thermophila]
Length = 250
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R++ D+F+ Y T G DF K L I R VKL +WD G+
Sbjct: 21 GKSSVLLRFSDDQFSESYLTTIGVDFRFKTLNIDGRKVKLQIWDTAGQ 68
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQ 67
>gi|340367925|ref|XP_003382503.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SCF TR + FT +Y T G DF+ + L I ++ V L WD G+ E + K Y
Sbjct: 20 GKSCFLTRLCTNTFTTKYASTIGVDFYSRALVIDDKTVALQFWDTAGQ--ERFQSVTKAY 77
Query: 72 LSSAN 76
A+
Sbjct: 78 YRGAD 82
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQ 67
>gi|145527983|ref|XP_001449791.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833702|emb|CAI39328.1| rab_B55 [Paramecium tetraurelia]
gi|124417380|emb|CAK82394.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+ D F+ Y T G DF K L + N+G+KL +WD G+
Sbjct: 21 GKSALLLRFADDTFSENYITTIGVDFRFKTLKVDNKGLKLQIWDTAGQ 68
>gi|111226256|ref|XP_635210.2| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208508|sp|P34141.2|RABA_DICDI RecName: Full=Ras-related protein RabA; Flags: Precursor
gi|90970434|gb|EAL61600.2| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T+D FT Y T G DF +K + I+ + +KL +WD G+
Sbjct: 20 GKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQ 67
>gi|318067918|ref|NP_001188206.1| ras-related protein Rab-28 [Ictalurus punctatus]
gi|308324152|gb|ADO29211.1| ras-related protein rab-28 [Ictalurus punctatus]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 24 GKTSVATRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQ 72
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + N+ +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQIWDTAGQ 70
>gi|66819641|ref|XP_643480.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017350|sp|Q8MXQ2.2|RB32C_DICDI RecName: Full=Ras-related protein Rab-32C
gi|60471632|gb|EAL69588.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L + L G + RY + F +Y PT G DF K+L I + V L LWDI G+ E
Sbjct: 32 LVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQ--ER 89
Query: 64 SAGLVKTYLSSAN 76
+ + Y +A+
Sbjct: 90 FGHMTRVYFQNAH 102
>gi|304602|gb|AAC37382.1| RabA, partial [Dictyostelium discoideum]
gi|739976|prf||2004272C rabA gene
Length = 199
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T+D FT Y T G DF +K + I+ + +KL +WD G+
Sbjct: 18 GKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQ 65
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF +K + ++ + VKL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQ 67
>gi|221057075|ref|XP_002259675.1| Rab1 protein [Plasmodium knowlesi strain H]
gi|193809747|emb|CAQ40449.1| Rab1 protein, putative [Plasmodium knowlesi strain H]
Length = 207
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRRIKVGDKMVKLQIWDTAGQ 71
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC +R+T+D+F+ + PT G +F K + I ++ +K +WD G+
Sbjct: 25 GKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQ 72
>gi|297798016|ref|XP_002866892.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312728|gb|EFH43151.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y PT G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|389584195|dbj|GAB66928.1| small GTPase Rab1 [Plasmodium cynomolgi strain B]
Length = 205
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 24 GKSCILLRFSDDHFTESYITTIGVDFRFRRIKVGDKMVKLQIWDTAGQ 71
>gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener]
gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 268
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F +QY T G DF K + + NR V+L +WD G+ E L+ +Y
Sbjct: 46 GKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTAGQ--ERFRSLIPSY 103
Query: 72 LSSAN 76
+ +++
Sbjct: 104 IRNSS 108
>gi|403216653|emb|CCK71149.1| hypothetical protein KNAG_0G00930 [Kazachstania naganishii CBS
8797]
Length = 213
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D F + T G DF +K + I + VKL LWD G+
Sbjct: 30 GKSCLLVRFVEDRFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 77
>gi|440803956|gb|ELR24839.1| Rab8/RabEfamily small GTPase, putative [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ FT + PT G DF ++ + I+ + +KL LWD G+
Sbjct: 22 GKSCLLQRFSDGTFTHSFMPTIGIDFKVRTVPIEGKEIKLQLWDTAGQ 69
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T D FT + T G DF +K + ++ + VKL +WD G+
Sbjct: 24 GKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDTAGQ 71
>gi|312283531|dbj|BAJ34631.1| unnamed protein product [Thellungiella halophila]
Length = 213
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y PT G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|126331906|ref|XP_001363710.1| PREDICTED: ras-related protein Rab-28-like isoform 2 [Monodelphis
domestica]
Length = 220
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
T G + +TR+ Q+ F +QY T G DF LK +T+ N L +WDIGG+
Sbjct: 22 TSGKTSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNLNATLQVWDIGGQ 72
>gi|440300546|gb|ELP92993.1| hypothetical protein EIN_051580 [Entamoeba invadens IP1]
Length = 208
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D F++ Y T G DF +K + I + KL +WD G+
Sbjct: 25 GKSCLLLRFADDVFSKTYITTIGVDFKIKTMKIDGKNAKLQIWDTAGQ 72
>gi|126331904|ref|XP_001363631.1| PREDICTED: ras-related protein Rab-28-like isoform 1 [Monodelphis
domestica]
Length = 221
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
T G + +TR+ Q+ F +QY T G DF LK +T+ N L +WDIGG+
Sbjct: 22 TSGKTSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNLNATLQVWDIGGQ 72
>gi|12084567|pdb|1G17|A Chain A, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
gi|12084568|pdb|1G17|B Chain B, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
Length = 170
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL +WD G+
Sbjct: 15 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 62
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIWDTAGQ 67
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + N+ +KL +WD G+
Sbjct: 25 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIWDTAGQ 72
>gi|15236081|ref|NP_195699.1| Ras-related protein RABH1C [Arabidopsis thaliana]
gi|75337423|sp|Q9SMR4.1|RAH1C_ARATH RecName: Full=Ras-related protein RABH1c; Short=AtRABH1c
gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|332661734|gb|AEE87134.1| Ras-related protein RABH1C [Arabidopsis thaliana]
Length = 214
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y PT G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|294885227|ref|XP_002771233.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
gi|239874713|gb|EER03049.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
Length = 214
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 22 GKSCLLLRFADDSFTESYITTIGVDFRFRTIPVSDKTVKLQIWDTAGQ 69
>gi|363755488|ref|XP_003647959.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891995|gb|AET41142.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 213
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F+ + T G DF +K + I + +KL LWD G+
Sbjct: 32 GKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDIDGKKIKLQLWDTAGQ 79
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQ 67
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum
JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum
JPCM5]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQ 67
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQ 67
>gi|145519165|ref|XP_001445449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833780|emb|CAI39355.1| rab_A55 [Paramecium tetraurelia]
gi|124412904|emb|CAK78052.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+ D F+ Y T G DF K L + N+G+KL +WD G+
Sbjct: 21 GKSALLLRFADDTFSENYITTIGVDFRFKTLKVDNKGLKLQIWDTAGQ 68
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS
2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS
2517]
Length = 212
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQIWDTAGQ 67
>gi|194890059|ref|XP_001977225.1| GG18360 [Drosophila erecta]
gi|190648874|gb|EDV46152.1| GG18360 [Drosophila erecta]
Length = 218
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT +Y T G DF ++ + + + VKL LWD G+
Sbjct: 19 GKSCLLMRFSDDRFTGKYLCTVGVDFKVRSVEVAGQPVKLQLWDTAGE 66
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQ 67
>gi|313227767|emb|CBY22916.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RYT D FT +Y T G DF LK + + + + L LWD G+ E LV+++
Sbjct: 18 GKSSILIRYTDDTFTEKYTGTIGVDFKLKKIFRKGQEINLQLWDTAGQ--ERFKSLVRSF 75
Query: 72 LSSAN 76
AN
Sbjct: 76 YKGAN 80
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDTAGQ 67
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + N+ +KL +WD G+
Sbjct: 25 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIWDTAGQ 72
>gi|325188016|emb|CCA22559.1| Rbjlike protein putative [Albugo laibachii Nc14]
Length = 196
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 3 PLYIKV-----LTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIG 57
P IK+ L+ G SC R+ +++F +Y T G D+ +K L + NR V++ WD
Sbjct: 30 PQRIKIISMGNLSVGKSCMIKRFCEEKFVNKYISTIGIDYGVKSLLMSNREVRVNFWDFS 89
Query: 58 GK 59
G+
Sbjct: 90 GQ 91
>gi|12084563|pdb|1G16|A Chain A, Crystal Structure Of Sec4-Gdp
gi|12084564|pdb|1G16|B Chain B, Crystal Structure Of Sec4-Gdp
gi|12084565|pdb|1G16|C Chain C, Crystal Structure Of Sec4-Gdp
gi|12084566|pdb|1G16|D Chain D, Crystal Structure Of Sec4-Gdp
Length = 170
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF +K + I + VKL +WD G+
Sbjct: 15 GKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 62
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus
anophagefferens]
Length = 204
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQ 68
>gi|313218156|emb|CBY41456.1| unnamed protein product [Oikopleura dioica]
gi|313222707|emb|CBY41703.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RYT D FT +Y T G DF LK + + + + L LWD G+ E LV+++
Sbjct: 18 GKSSILIRYTDDTFTEKYTGTIGVDFKLKKIFRKGQEINLQLWDTAGQ--ERFKSLVRSF 75
Query: 72 LSSAN 76
AN
Sbjct: 76 YKGAN 80
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ D F + +PT G DF K + + ++ ++L LWD G+ E L+ +Y
Sbjct: 33 GKTCIIERFMYDVFDEKSHPTVGVDFLAKSIKLDDKNIRLQLWDTAGQ--ERFRSLIPSY 90
Query: 72 LSSA 75
L A
Sbjct: 91 LRDA 94
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++ + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQIWDTAGQ 67
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIRTIKLDNKTVKLQIWDTAGQ 67
>gi|294934541|ref|XP_002781132.1| hypothetical protein Pmar_PMAR000662 [Perkinsus marinus ATCC 50983]
gi|239891438|gb|EER12927.1| hypothetical protein Pmar_PMAR000662 [Perkinsus marinus ATCC 50983]
Length = 518
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + ++ VKL +WD G+
Sbjct: 326 GKSCLLLRFADDSFTESYITTIGVDFRFRTIPVSDKTVKLQIWDTAGQ 373
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T D FT + T G DF +++ + + +KL +WD G+
Sbjct: 27 GKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQIWDTAGQ 74
>gi|444319260|ref|XP_004180287.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS
6284]
gi|387513329|emb|CCH60768.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS
6284]
Length = 217
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D+F + T G DF +K + I + +KL LWD G+
Sbjct: 32 GKSCLLVRFVDDKFNPSFITTIGIDFKIKTIDINGKKIKLQLWDTAGQ 79
>gi|327283245|ref|XP_003226352.1| PREDICTED: ras-related protein Rab-28-like [Anolis carolinensis]
Length = 246
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +T+ N V L +WD+GG+
Sbjct: 58 GRTSLATRFAQEAFGKQYKQTIGLDFFLKRITLPGNVNVTLQVWDVGGQ 106
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T+D F ++ T G DF +K +T+Q VKL +WD G+
Sbjct: 21 GKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 68
>gi|71410660|ref|XP_807614.1| small GTP-binding protein Rab1 [Trypanosoma cruzi strain CL
Brener]
gi|70871653|gb|EAN85763.1| small GTP-binding protein Rab1, putative [Trypanosoma cruzi]
Length = 210
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIWDTAGQ 67
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS
6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS
6284]
Length = 210
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D ++ Y T G DF +K + I + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWDTAGQ 67
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium
distachyon]
Length = 212
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + I + +KL +WD G+
Sbjct: 20 GKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIWDTAGQ 67
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + +KL +WD G+
Sbjct: 22 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQ 69
>gi|223997454|ref|XP_002288400.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220975508|gb|EED93836.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 202
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F R Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 41 GKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 98
Query: 72 LSSANIS 78
+ ++++
Sbjct: 99 IRDSSVA 105
>gi|111226539|ref|XP_639353.2| Rab GTPase [Dictyostelium discoideum AX4]
gi|122056630|sp|Q54RY4.2|RABV_DICDI RecName: Full=Ras-related protein RabV
gi|90970635|gb|EAL66029.2| Rab GTPase [Dictyostelium discoideum AX4]
Length = 233
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWD 55
G S R T+DEF QY PT G DF K++ I+ KL +WD
Sbjct: 20 GKSSLLIRATKDEFNSQYIPTIGIDFDYKIMEIKGEKYKLQIWD 63
>gi|323448668|gb|EGB04563.1| hypothetical protein AURANDRAFT_32238 [Aureococcus anophagefferens]
Length = 241
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 3 PLYIKVLTE---GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
P+ I VL + G + + +DEFT +Y T+G DF LK + + + V+L LWD+ G
Sbjct: 42 PVKILVLGDKAVGKTALIRQLVRDEFTSRYKSTTGVDFALKEIDVDGQTVRLQLWDVAG- 100
Query: 60 ANESSAGLVKTY 71
A + + K Y
Sbjct: 101 AETTLGSIAKVY 112
>gi|219122405|ref|XP_002181536.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406812|gb|EEC46750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 236
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F R Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 45 GKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 102
Query: 72 LSSANIS 78
+ ++++
Sbjct: 103 IRDSSVA 109
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTAGQ 67
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + I ++ +KL +WD G+
Sbjct: 24 GKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIKLQIWDTAGQ 71
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L I + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWDTAGQ 67
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIWDTAGQ 67
>gi|407835694|gb|EKF99361.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 206
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIWDTAGQ 67
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + +KL +WD G+
Sbjct: 22 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQ 69
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS
4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS
4417]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS
421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS
421]
Length = 210
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ +D F+ Y T G DF ++ + + + +KL +WD G+ E + K+Y
Sbjct: 21 GKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQIWDTAGQ--ERFRTITKSY 78
Query: 72 LSSAN 76
+N
Sbjct: 79 YRGSN 83
>gi|340502213|gb|EGR28924.1| hypothetical protein IMG5_166730 [Ichthyophthirius multifiliis]
Length = 218
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC +++ + +F ++ T G +F ++L+I N+ +KL +WD G+ ES + ++Y
Sbjct: 18 GKSCVLSQFIEKKFKEKHDVTIGVEFGARMLSIDNKNIKLQIWDTAGQ--ESFRSITRSY 75
Query: 72 LSSA 75
SA
Sbjct: 76 YRSA 79
>gi|328700247|ref|XP_001948288.2| PREDICTED: ras and EF-hand domain-containing protein homolog
[Acyrthosiphon pisum]
Length = 582
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +CF R+ + FT + T G DF +K + + +R V L LWD G+ E + K Y
Sbjct: 400 GKTCFIHRFCKGTFTTKLGSTLGVDFQVKTIRVDDRNVALQLWDTAGQ--ERFRSITKAY 457
Query: 72 LSSAN 76
A+
Sbjct: 458 FRRAD 462
>gi|387017960|gb|AFJ51098.1| ras-related protein Rab-28-like isoform 2 [Crotalus adamanteus]
Length = 233
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
G + +TR+ D F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 26 GKTSLATRFVHDTFGKQYKQTIGLDFFLKRITLPGNINVTLHVWDIGGQ 74
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 1 MAPLYIKVL-----TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLT-IQNRGVKLILW 54
M+ + KVL T G + F RY R+Y PT G DF LK++ Q+ V+L LW
Sbjct: 1 MSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQLW 60
Query: 55 DIGGKANESSAGLVKTYLSSA 75
DI G+ E + + Y A
Sbjct: 61 DIAGQ--ERFTSMTRVYYKGA 79
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWDTAGQ 67
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|111143508|gb|ABH06562.1| small Rab GTPase [Trichomonas vaginalis]
gi|111143526|gb|ABH06563.1| small Rab GTPase [Trichomonas vaginalis]
Length = 200
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+T+D F Y T G DF ++ + + VKL +WD G+ E + K+Y
Sbjct: 20 GKSCLLLRFTEDLFIENYISTIGVDFKIRTIEQEGAKVKLQIWDTAGQ--ERFRAITKSY 77
Query: 72 LSSAN 76
+N
Sbjct: 78 YHGSN 82
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWDTAGQ 67
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta
CCMP2712]
Length = 200
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWDTAGQ 67
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQ 67
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWDTAGQ 67
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|328354607|emb|CCA41004.1| GTP-binding protein YPT6 [Komagataella pastoris CBS 7435]
Length = 250
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K L + ++ V+L LWD G+ E LV +Y
Sbjct: 64 GKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDTAGQ--ERFRSLVPSY 121
Query: 72 LSSANIS 78
+ +N++
Sbjct: 122 IRDSNVA 128
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D FT + T G DF +K + I + VKL +WD G+
Sbjct: 23 GKSCLLLRFAEDSFTSSFITTIGIDFKIKKVLIDGKWVKLQIWDTAGQ 70
>gi|195558515|ref|XP_002077302.1| GD11278 [Drosophila simulans]
gi|194202401|gb|EDX15977.1| GD11278 [Drosophila simulans]
Length = 215
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R++ D FT +Y T G DF ++ + + R V L +WD G +E L+ +Y
Sbjct: 19 GKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAG--DERFKSLLPSY 76
Query: 72 LSSA 75
A
Sbjct: 77 YRGA 80
>gi|315045802|ref|XP_003172276.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
gi|311342662|gb|EFR01865.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
Length = 209
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ ++N++
Sbjct: 86 IQNSNVA 92
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQIWDTAGQ 67
>gi|189066586|dbj|BAG35836.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F+R Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSRHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1297 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1344
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D+F + T G DF +K + I + +KL LWD G+
Sbjct: 31 GKSCLLVRFVDDKFNPSFITTIGIDFKIKTVEINGKKIKLQLWDTAGQ 78
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 22 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 69
>gi|327304701|ref|XP_003237042.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326460040|gb|EGD85493.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326472998|gb|EGD97007.1| Ras small monomeric GTPase [Trichophyton tonsurans CBS 112818]
Length = 209
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ ++N++
Sbjct: 86 IQNSNVA 92
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1353 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1400
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1354 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1401
>gi|296806631|ref|XP_002844115.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
gi|238845417|gb|EEQ35079.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
Length = 209
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ ++N++
Sbjct: 86 IQNSNVA 92
>gi|340501713|gb|EGR28462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 585
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ D F + + T G DF K L ++ V+L LWD G+ E L+ +Y
Sbjct: 381 GKSCIIERFMYDVFDEKSHSTVGVDFLAKTLHTGDKSVRLQLWDTAGQ--ERFRSLIPSY 438
Query: 72 LSSAN 76
L AN
Sbjct: 439 LRDAN 443
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1326 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1373
>gi|397611796|gb|EJK61478.1| hypothetical protein THAOC_18027, partial [Thalassiosira oceanica]
Length = 307
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F R Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 115 GKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 172
Query: 72 LSSANIS 78
+ ++++
Sbjct: 173 IRDSSVA 179
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQ 67
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D+F + T G DF +K + I + +KL LWD G+
Sbjct: 32 GKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKIKLQLWDTAGQ 79
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein
YP2; AltName: Full=Rab GTPase YPT1; AltName:
Full=Transport GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex
With Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1324 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1371
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1326 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1373
>gi|313241573|emb|CBY33817.1| unnamed protein product [Oikopleura dioica]
Length = 180
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F + Y T G DF K L I + V+L LWD G+ E L+ +Y
Sbjct: 24 GKTSLITRFMYDSFDQHYQATIGIDFLSKTLQIDDNTVRLQLWDTAGQ--ERFRSLIPSY 81
Query: 72 LSSANI 77
+ +N+
Sbjct: 82 IRDSNV 87
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS
4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS
4309]
Length = 211
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1353 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1400
>gi|225718126|gb|ACO14909.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG--VKLILWDIGGK 59
L I + G S + RYT F+ Y T G DFHLK+L + RG ++L LWDI G+
Sbjct: 21 LVIGDVNAGKSAYIRRYTGGNFSEDYLATVGVDFHLKVLHLL-RGLEIRLQLWDIAGQ 77
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTVKLQIWDTAGQ 67
>gi|145541710|ref|XP_001456543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424355|emb|CAK89146.1| unnamed protein product [Paramecium tetraurelia]
Length = 359
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G SC RY +D+FT +Y T G +F K++ I ++ VKL +WD G+ ES +V++
Sbjct: 162 GKSCLLMRYMKDDFTTEYNVTIGVEFLSKVVNINEDTKVKLQIWDTAGQ--ESFRSVVRS 219
Query: 71 Y 71
+
Sbjct: 220 F 220
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1381 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1428
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 20 GKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWDTAGQ 67
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 24 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 71
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ R +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDTAGQ 70
>gi|195350792|ref|XP_002041922.1| GM11275 [Drosophila sechellia]
gi|194123727|gb|EDW45770.1| GM11275 [Drosophila sechellia]
Length = 215
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R++ D FT +Y T G DF ++ + + R V L +WD G +E L+ +Y
Sbjct: 19 GKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAG--DERFKSLLPSY 76
Query: 72 LSSA 75
A
Sbjct: 77 YRGA 80
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|221111768|ref|XP_002162570.1| PREDICTED: ras-related protein Rab-3C-like [Hydra magnipapillata]
Length = 213
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +CF RY++D FT + T G DF +K + ++ +KL +WD G+
Sbjct: 30 GKTCFLFRYSEDSFTSGFVSTVGIDFKVKTVFRNDKQIKLQIWDTAGQ 77
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis
niloticus]
Length = 200
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQ 67
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC RY+ D FT + T G DF +K + + + VKL +WD G+
Sbjct: 1378 GKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDTAGQ 1425
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D+FT + T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQ 70
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 33 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 80
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQ 67
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|348515407|ref|XP_003445231.1| PREDICTED: ras-related protein Rab-28-like [Oreochromis
niloticus]
Length = 221
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +++ N V L +WDIGG+
Sbjct: 24 GKTSLATRFAQEAFGKQYKQTIGLDFFLKRISLPGNLNVTLQVWDIGGQ 72
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|145513861|ref|XP_001442841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834271|emb|CAI44501.1| rab_C34 [Paramecium tetraurelia]
gi|124410202|emb|CAK75444.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + T++ +F++ Y T G DF +K+L +Q++ +KL +WD G+ E + +TY
Sbjct: 21 GKTNILTQFCDQKFSQNYTATIGVDFKIKILNVQDKKIKLQIWDTAGQ--ERFRNITQTY 78
Query: 72 LSSA 75
A
Sbjct: 79 YKGA 82
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQ 67
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T D FT + T G DF +K + + + VKL +WD G+
Sbjct: 25 GKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQ 72
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + R VKL +WD G+
Sbjct: 28 GKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQ 75
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D +T+ Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
>gi|229594642|ref|XP_001033234.3| Ras family protein [Tetrahymena thermophila]
gi|225566726|gb|EAR85571.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777756|dbj|BAJ21274.1| Rab-family small GTPase Rab1F [Tetrahymena thermophila]
Length = 211
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S R+T D F PT G DF ++ T+ N+ VKL +WD G+ E ++K Y
Sbjct: 22 GKSSLMMRFTDDVFNVVLIPTIGVDFKIRSFTVDNKIVKLNIWDTAGQ--ERFDAIIKAY 79
>gi|414587347|tpg|DAA37918.1| TPA: hypothetical protein ZEAMMB73_495042 [Zea mays]
Length = 254
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SCF R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 48 GKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTTGQ 95
>gi|169806162|ref|XP_001827826.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
gi|161779274|gb|EDQ31297.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
Length = 200
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RYT + + + T G DF +K + + + VKL +WD G+ E +V Y
Sbjct: 20 GKTCLLQRYTDNVYNESFQSTIGVDFKIKTIKLNGKKVKLQIWDTAGQ--ERFKSIVSNY 77
Query: 72 LSSAN 76
AN
Sbjct: 78 YRGAN 82
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D +T+ Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDTAGQ 67
>gi|343475422|emb|CCD13178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDTAGQ 67
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
>gi|260812870|ref|XP_002601143.1| hypothetical protein BRAFLDRAFT_279031 [Branchiostoma floridae]
gi|229286434|gb|EEN57155.1| hypothetical protein BRAFLDRAFT_279031 [Branchiostoma floridae]
Length = 224
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + + RY+Q+ F +QY T G DF L+ + + N V L LWDIGG+ G++
Sbjct: 24 GKTSLAVRYSQENFGKQYKQTVGLDFFLRRIVLPGNIHVALQLWDIGGQT--LGGGMLDK 81
Query: 71 YLSSAN 76
Y+ A+
Sbjct: 82 YIFGAH 87
>gi|439532|gb|AAA57052.1| guanine nucleotide regulatory protein [Paramecium tetraurelia]
Length = 126
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 19 RYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
R+ D F+ Y T G DF K L + N+G+KL +WD G+
Sbjct: 7 RFADDTFSENYITTIGVDFRFKTLKVDNKGLKLQIWDTAGQ 47
>gi|167522685|ref|XP_001745680.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776029|gb|EDQ89651.1| predicted protein [Monosiga brevicollis MX1]
Length = 201
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
T G S + RY+++EF Q T G DF LK + + ++ +K+ +WD G+
Sbjct: 16 TVGKSSMAARYSRNEFYEQAISTIGVDFVLKTMQVDSKTIKMQVWDTAGQ 65
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|340508208|gb|EGR33965.1| hypothetical protein IMG5_029320 [Ichthyophthirius multifiliis]
Length = 225
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + F R+++D+F + + G DF + L I N+ +KL +WD G+ E+ + K Y
Sbjct: 33 GKTSFLIRFSEDQFFKNVNTSVGIDFRYRSLIIDNKQIKLKIWDTAGQ--ENYRAISKRY 90
Query: 72 LSSAN 76
A+
Sbjct: 91 FQKAD 95
>gi|328774170|gb|EGF84207.1| hypothetical protein BATDEDRAFT_5975, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 156
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
G SC RY + F +Y T G DF +K + ++ +K+ WD+GG
Sbjct: 12 GKSCLVKRYCEGRFILEYVATIGIDFGVKAIQCNDKEIKVNFWDVGG 58
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|239791411|dbj|BAH72176.1| ACYPI000150 [Acyrthosiphon pisum]
Length = 102
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + N+ VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDSYISTIGVDFKIRTIKLDNKTVKLQIWDTAGQ 67
>gi|343470855|emb|CCD16567.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDTAGQ 67
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|89258437|gb|ABD65442.1| Rab28 [Suberites domuncula]
Length = 226
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
T G + TRY+Q+ F + Y T G DF +K L I + V L +WDIGG+A
Sbjct: 24 TTGKTSLVTRYSQNHFGKTYQQTLGLDFFMKRLKIPGDVNVTLQVWDIGGQA 75
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 67
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T+D F + T G DF +K LT+Q VKL +WD G+
Sbjct: 21 GKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKTIKLQIWDTAGQ 67
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii
H99]
Length = 205
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + +Q + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F +QY T G DF K L I NR +L +WD G+ E L+ +Y
Sbjct: 39 GKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRLHVWDTAGQ--ERFRSLIPSY 96
Query: 72 LSSA 75
+ ++
Sbjct: 97 IRNS 100
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + R VKL +WD G+
Sbjct: 28 GKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDTAGQ 75
>gi|439534|gb|AAA57053.1| guanine nucleotide regulatory protein [Paramecium tetraurelia]
Length = 125
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 18 TRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTYLSSA 75
T+Y +F++ Y T G DF +K +T++++ +KL +WD G+ E + +TY A
Sbjct: 6 TQYCDQKFSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQ--ERFRNITQTYYKGA 61
>gi|145531481|ref|XP_001451507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834559|emb|CAI44582.1| rab_A01 [Paramecium tetraurelia]
gi|124419162|emb|CAK84110.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S RYT D F+ Y T G DF K + +G+KL +WD G+
Sbjct: 21 GKSSLLVRYTDDTFSENYISTIGVDFKFKTFRLDGKGLKLQIWDTAGQ 68
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|340373941|ref|XP_003385498.1| PREDICTED: ras-related protein RIC1-like [Amphimedon
queenslandica]
Length = 254
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RYTQD F + PT G DF K++ + KL LWD G+
Sbjct: 44 GKTCLILRYTQDVFRESFLPTIGVDFKSKIVEEGEKRYKLQLWDTAGQ 91
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|145494342|ref|XP_001433165.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834436|emb|CAI44545.1| rab_B11 [Paramecium tetraurelia]
gi|124400282|emb|CAK65768.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + T+Y +F++ Y T G DF +K +T++++ +KL +WD G+ E + +TY
Sbjct: 21 GKTNILTQYCDQKFSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQ--ERFRNITQTY 78
Query: 72 LSSA 75
A
Sbjct: 79 YKGA 82
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|340502000|gb|EGR28722.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 175
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R++ D+F Y T G DF + L I + VKL +WD G+
Sbjct: 20 GKSSLLLRFSDDQFNENYLTTIGVDFRFRTLNIDQKQVKLQIWDTAGQ 67
>gi|407854096|gb|EKG06642.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 272
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F +QY T G DF K + + NR V+L +WD G+ E L+ +Y
Sbjct: 49 GKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTAGQ--ERFRSLIPSY 106
Query: 72 LSSAN 76
+ +++
Sbjct: 107 IRNSS 111
>gi|290983700|ref|XP_002674566.1| rab family small GTPase [Naegleria gruberi]
gi|284088157|gb|EFC41822.1| rab family small GTPase [Naegleria gruberi]
Length = 217
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G SC RY+ D+F + T G DF +K T+ NR K+ LWD G+ E +V
Sbjct: 28 GKSCLLVRYSDDDFFESHLTTIGVDFKIKTQTLPDNRVAKIQLWDTAGQ--ERFNSIVSG 85
Query: 71 YLSSAN 76
Y S+N
Sbjct: 86 YYRSSN 91
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T+D F + T G DF +K LT+Q VKL +WD G+
Sbjct: 21 GKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 12 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 59
>gi|145509483|ref|XP_001440680.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834542|emb|CAI44578.1| rab_A11 [Paramecium tetraurelia]
gi|124407908|emb|CAK73283.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + T+Y +F++ Y T G DF +K +T++++ +KL +WD G+ E + +TY
Sbjct: 21 GKTNILTQYCDQKFSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQ--ERFRNITQTY 78
Query: 72 LSSA 75
A
Sbjct: 79 YKGA 82
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|340502668|gb|EGR29335.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R++ D+F Y T G DF + L I+ + VKL +WD G+
Sbjct: 20 GKSSLLLRFSDDQFNENYLTTIGVDFRFRTLNIEGKSVKLQIWDTAGQ 67
>gi|126306731|ref|XP_001365593.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Monodelphis domestica]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY QD F+R Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYCQDSFSRHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName:
Full=GTP-binding protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + ++ + +KL +WD G+
Sbjct: 27 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 74
>gi|41054307|ref|NP_956046.1| ras-related protein Rab-28 [Danio rerio]
gi|28277631|gb|AAH45389.1| RAB28, member RAS oncogene family [Danio rerio]
Length = 221
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + + R+ Q+ F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 24 GKTSLAIRFAQEAFGKQYKQTIGLDFFLKRITLPGNLNVTLQVWDIGGQ 72
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 70
>gi|225718460|gb|ACO15076.1| Ras-related protein Rab-10 [Caligus clemensi]
Length = 225
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C + R+T + F + T G DF +K L I + VKL +WD G+
Sbjct: 39 GKTCITLRFTDESFKSNFTHTLGVDFKIKTLEIHGKRVKLQIWDTAGQ 86
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 44 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 91
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + ++ + +KL +WD G+
Sbjct: 30 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 77
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
>gi|70888341|gb|AAZ13769.1| Rab protein [Euplotes octocarinatus]
Length = 220
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D+F Y T G DF + L I VKL +WD G+
Sbjct: 23 GKSCLLIRFSDDDFNDNYVTTIGVDFRFRTLRIGEYSVKLQIWDTAGQ 70
>gi|346468105|gb|AEO33897.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D FT Y T G DF +K + + + +KL +WD G+
Sbjct: 23 GKTCLVRRFAEDTFTSGYKLTVGVDFKIKTIDLHGKTIKLQIWDTAGE 70
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + ++ + +KL +WD G+
Sbjct: 30 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 77
>gi|324514540|gb|ADY45900.1| Ras-related protein Rab-43 [Ascaris suum]
Length = 210
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L I+ + VKL +WD GG+ E + ++Y
Sbjct: 22 GKTCVVQRFKNGTFIERQGTTIGVDFTMKTLVIEGKRVKLQIWDTGGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ DEF + T G DF +K L++ + +KL +WD G+
Sbjct: 21 GKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWDTAGQ 68
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 61 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 108
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|189529263|ref|XP_001342875.2| PREDICTED: ras-related protein Rab-38 [Danio rerio]
Length = 211
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L I L G + RY F+ Y T G DF LK+L + V+L LWDI G+ E
Sbjct: 14 LVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETVRLQLWDIAGQ--ER 71
Query: 64 SAGLVKTYLSSA 75
+ + Y A
Sbjct: 72 FGNMTRVYYREA 83
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T + T G DF +K + I + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQ 67
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 210
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C TR+ D F + T G DF +K +++ ++ VKL +WD G+
Sbjct: 25 GKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYDKRVKLTVWDTAGQ 72
>gi|156378540|ref|XP_001631200.1| predicted protein [Nematostella vectensis]
gi|156218236|gb|EDO39137.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ DEF + + T G DF +K L + + +++ +WD G+
Sbjct: 20 GKTCILCRFANDEFNKSHISTIGIDFKMKTLMVDGKRIRIQMWDTAGQ 67
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|308804045|ref|XP_003079335.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus
tauri]
gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus
tauri]
Length = 213
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D+FT + T G DF +K + + + VKL +WD G+
Sbjct: 33 GKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIWDTAGQ 80
>gi|340502549|gb|EGR29228.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 219
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + R+ D FT PT G DF K LT+ N+ ++L LWD G+ E L+ +Y
Sbjct: 24 GKTSIINRFIYDNFTGSEQPTVGIDFICKTLTLDNKTLRLQLWDTAGQ--ERFKSLIPSY 81
Query: 72 LSSAN 76
+ +N
Sbjct: 82 IRDSN 86
>gi|152012618|gb|AAI50366.1| LOC100003274 protein [Danio rerio]
Length = 202
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L I L G + RY F+ Y T G DF LK+L + V+L LWDI G+ E
Sbjct: 5 LVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETVRLQLWDIAGQ--ER 62
Query: 64 SAGLVKTYLSSA 75
+ + Y A
Sbjct: 63 FGNMTRVYYREA 74
>gi|410914279|ref|XP_003970615.1| PREDICTED: ras-related protein Rab-28-like isoform 1 [Takifugu
rubripes]
Length = 221
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +++ N V L +WDIGG+
Sbjct: 24 GKTSIATRFAQEAFGKQYKQTIGLDFFLKRISLPGNVNVTLQVWDIGGQ 72
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + ++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDTAGQ 67
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D +T Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173
SS5]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 67
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + + VKL +WD G+
Sbjct: 27 GKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQIWDTAGQ 74
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K +T+ ++ VKL +WD G+ E + ++Y
Sbjct: 35 GKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDDKKVKLQIWDTAGQ--ERFRTITQSY 92
Query: 72 LSSAN 76
SAN
Sbjct: 93 YRSAN 97
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY D F+ + T G DF +K + + N+ VKL +WD G+
Sbjct: 23 GKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQ 70
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 25 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 73
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F +QY T G DF K L + NR V L +WD G+ E L+ +Y
Sbjct: 41 GKTSLVTRFMYDTFDQQYQATIGIDFFSKTLHVDNRAVWLHVWDTAGQ--ERFRSLIPSY 98
Query: 72 LSSA 75
+ ++
Sbjct: 99 IRNS 102
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + ++ + +KL +WD G+
Sbjct: 30 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 77
>gi|403373891|gb|EJY86873.1| Ras-related protein rab28-like protein [Oxytricha trifallax]
Length = 243
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLV 68
T G + R+ +D F R Y T G DF +K L + N V L +WDIGG++ ++
Sbjct: 37 TVGKTSIIMRFCEDHFARSYKQTIGVDFFVKRLEMPGNVHVALQVWDIGGQS--IFGKMI 94
Query: 69 KTYLSSAN 76
+TY+ AN
Sbjct: 95 QTYIYEAN 102
>gi|183231256|ref|XP_655064.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802558|gb|EAL49676.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +F Y T G DF K +T QN+ ++L +WD G+ E L+ +Y
Sbjct: 18 GKTCIIGRFMNGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ--ERYRSLIPSY 75
Query: 72 LSSA 75
+ +
Sbjct: 76 IRDS 79
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ ++ + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 70
>gi|431913720|gb|ELK15210.1| Ras-related protein Rab-43 [Pteropus alecto]
Length = 212
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQSSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|47226163|emb|CAG08310.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +++ N V L +WDIGG+
Sbjct: 24 GKTSLATRFAQEAFGKQYKQTIGLDFFLKRISLPGNMNVTLQVWDIGGQ 72
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWDIAGQ 67
>gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573631|gb|EAW53246.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573632|gb|EAW53247.1| hCG1996054, isoform CRA_d [Homo sapiens]
Length = 166
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T + T G DF +K + I + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQ 67
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 58 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 105
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWDTAGQ 67
>gi|312065340|ref|XP_003135743.1| Ras family protein [Loa loa]
gi|307769102|gb|EFO28336.1| Ras family protein [Loa loa]
Length = 209
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L I+ + VKL +WD GG+ E + ++Y
Sbjct: 22 GKTCVVQRFKNGTFIERQGTTIGVDFSMKTLIIEGKRVKLQIWDTGGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|395516732|ref|XP_003762541.1| PREDICTED: ras-related protein Rab-43-like [Sarcophilus harrisii]
Length = 212
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|354478103|ref|XP_003501255.1| PREDICTED: ras-related protein Rab-7L1-like [Cricetulus griseus]
Length = 204
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY D F+ + T G DF +K + + N+ VKL +WD G+
Sbjct: 23 GKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQ 70
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|344277036|ref|XP_003410311.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Loxodonta
africana]
Length = 204
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 1848 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 1895
>gi|395543031|ref|XP_003773426.1| PREDICTED: ras-related protein Rab-28 [Sarcophilus harrisii]
Length = 204
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 14 SCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
+ +TR+ Q+ F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 9 TSLATRFAQEAFGKQYKQTVGLDFFLKRITLPGNLNVTLQVWDIGGQ 55
>gi|378755061|gb|EHY65088.1| GTP-binding protein YPTM2 [Nematocida sp. 1 ERTm2]
Length = 201
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RYT + Y T G DF +K +T+ ++ VKL LWD G+ E + +Y
Sbjct: 19 GKTCILLRYTDSIYKETYGTTIGVDFKMKNITVDDKVVKLQLWDTAGQ--ERFRTITSSY 76
Query: 72 LSSAN 76
+AN
Sbjct: 77 YRNAN 81
>gi|167389639|ref|XP_001739030.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897453|gb|EDR24605.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +F+ Y T G DF K +T QN+ ++L +WD G+ E L+ +Y
Sbjct: 18 GKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ--ERYRSLIPSY 75
Query: 72 LSSA 75
+ +
Sbjct: 76 IRDS 79
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWDTAGQ 67
>gi|407040921|gb|EKE40414.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 186
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
++I + G +C R+T F Y T G DF +++ + N+ ++L +WD G+ E
Sbjct: 10 VFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTAGQ--ER 67
Query: 64 SAGLVKTYLSSANI 77
L+ Y+ A++
Sbjct: 68 YRSLIPNYIRGASV 81
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGL 67
G +C ++ +FT QY T G DF K + + N+ + L +WD G+ S G+
Sbjct: 20 GKTCLMNQFVSKKFTNQYKATIGADFQTKEVMVDNKLITLQIWDTAGQERFQSLGV 75
>gi|342873298|gb|EGU75501.1| hypothetical protein FOXB_13988 [Fusarium oxysporum Fo5176]
Length = 214
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 32 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 79
>gi|410914281|ref|XP_003970616.1| PREDICTED: ras-related protein Rab-28-like isoform 2 [Takifugu
rubripes]
Length = 222
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
G + +TR+ Q+ F +QY T G DF LK +++ N V L +WDIGG+
Sbjct: 24 GKTSIATRFAQEAFGKQYKQTIGLDFFLKRISLPGNVNVTLQVWDIGGQ 72
>gi|390340009|ref|XP_003725147.1| PREDICTED: dnaJ homolog subfamily C member 27-like
[Strongylocentrotus purpuratus]
Length = 191
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKAN 61
G +C + +D+F+ Y PT G D+ K+ I N +++ LWD+ G ++
Sbjct: 33 GKTCIIKHFCEDKFSHGYQPTVGVDYGFKIQNISNVDLRVHLWDLSGHSD 82
>gi|67469385|ref|XP_650671.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467319|gb|EAL45284.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790150|dbj|BAD82871.1| small GTPase EhRabX23 [Entamoeba histolytica]
gi|449705577|gb|EMD45593.1| small GTPase EhRabX23, putative [Entamoeba histolytica KU27]
Length = 186
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
++I + G +C R+T F Y T G DF +++ + N+ ++L +WD G+ E
Sbjct: 10 VFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTAGQ--ER 67
Query: 64 SAGLVKTYLSSANI 77
L+ Y+ A++
Sbjct: 68 YRSLIPNYIRGASV 81
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWDTAGQ 67
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + +Q + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
>gi|395838749|ref|XP_003792270.1| PREDICTED: ras-related protein Rab-7L1 [Otolemur garnettii]
Length = 204
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F Y T G DF ++ I+ + +KL +WD G+
Sbjct: 20 GKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQ 67
>gi|47028277|gb|AAT09071.1| RAS related GTP binding protein [Bigelowiella natans]
Length = 210
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L + + G + RYT D F + Y T G +F LK + + ++ V + LWDI G+ +
Sbjct: 10 LVVGDVAVGKTSIIQRYTNDSFRKDYKTTIGVEFALKPIEVDDKCVNIQLWDIAGQ--DR 67
Query: 64 SAGLVKTYLSSAN 76
GL++ + +A+
Sbjct: 68 FIGLLRNFYRNAS 80
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|167389097|ref|XP_001738817.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897808|gb|EDR24880.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +F+ Y T G DF K +T QN+ ++L +WD G+ E L+ +Y
Sbjct: 18 GKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ--ERYRSLIPSY 75
Query: 72 LSSA 75
+ +
Sbjct: 76 IRDS 79
>gi|440792164|gb|ELR13392.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 264
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVK-T 70
G S R+ DE++ Y T G DF ++ + I ++ VKL +WD G+ +V T
Sbjct: 18 GKSALLLRFADDEYSESYISTIGVDFKIRTINIDDKSVKLQIWDTAGQGRSPLPIIVAPT 77
Query: 71 YLSSANIS 78
LSS S
Sbjct: 78 ALSSPTTS 85
>gi|332261803|ref|XP_003279956.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Nomascus
leucogenys]
Length = 155
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|51859426|gb|AAH81732.1| Rab7l1 protein [Rattus norvegicus]
Length = 167
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|195481939|ref|XP_002101841.1| GE17848 [Drosophila yakuba]
gi|194189365|gb|EDX02949.1| GE17848 [Drosophila yakuba]
Length = 219
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R++ D FT +Y T G DF ++ + + + VKL +WD G+ E L+ Y
Sbjct: 19 GKSCLLMRFSDDRFTGKYLCTVGVDFKVRSVEVAGQVVKLQVWDTAGE--ERFKSLLPAY 76
Query: 72 LSSAN 76
A+
Sbjct: 77 YRGAH 81
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 8 VLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
+L G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 44 ILGLGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 95
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius
furo]
Length = 202
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWDTAGQ 67
>gi|241998682|ref|XP_002433984.1| RAS-related protein, putative [Ixodes scapularis]
gi|215495743|gb|EEC05384.1| RAS-related protein, putative [Ixodes scapularis]
Length = 155
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 70
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + I + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWDTAGQ 67
>gi|281350978|gb|EFB26562.1| hypothetical protein PANDA_011856 [Ailuropoda melanoleuca]
Length = 209
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGKANE 62
L I L G + RY F++ Y T G DF LK+L NR V+L LWDI G+ E
Sbjct: 12 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDIAGR-QE 70
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 71 RFGNMTRVYYREA 83
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F Y T G DF ++ I+ + +KL +WD G+
Sbjct: 20 GKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAGQ 67
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC ++T F +Q+ T G +F + + IQN+ +KL +WD G+ ES + ++Y
Sbjct: 18 GKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQNKNIKLQIWDTAGQ--ESFKSITRSY 75
Query: 72 LSSA 75
A
Sbjct: 76 YRGA 79
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWDTAGQ 67
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + ++ + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRVKLQIWDTAGQ 69
>gi|260797685|ref|XP_002593832.1| hypothetical protein BRAFLDRAFT_214835 [Branchiostoma floridae]
gi|229279062|gb|EEN49843.1| hypothetical protein BRAFLDRAFT_214835 [Branchiostoma floridae]
Length = 163
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R D++ + T G DFHLK + +N+ + + LWD G+ E + K+Y
Sbjct: 13 GKSTFIYRVCHDDYKATFSSTIGVDFHLKTVVAKNQKITMQLWDTAGQ--ERFRSITKSY 70
Query: 72 LSSAN 76
A+
Sbjct: 71 FRKAD 75
>gi|386781459|ref|NP_001247882.1| ras-related protein Rab-7L1 [Macaca mulatta]
gi|402857442|ref|XP_003893264.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|402857444|ref|XP_003893265.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|355558842|gb|EHH15622.1| hypothetical protein EGK_01737 [Macaca mulatta]
gi|355745985|gb|EHH50610.1| hypothetical protein EGM_01467 [Macaca fascicularis]
gi|380786041|gb|AFE64896.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
gi|383411345|gb|AFH28886.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
Length = 203
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDIAGQ 67
>gi|354491721|ref|XP_003508003.1| PREDICTED: ras-related protein Rab-28-like [Cricetulus griseus]
gi|344252867|gb|EGW08971.1| Ras-related protein Rab-28 [Cricetulus griseus]
Length = 221
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTVGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|325910899|ref|NP_001191816.1| ras-related protein Rab-43 isoform b [Homo sapiens]
gi|426342032|ref|XP_004036320.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Gorilla gorilla
gorilla]
Length = 155
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1 MAPLYIKVLTE---GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIG 57
+A I ++ E G S R+T+D+F + T G DF K++ I N VKL +WD
Sbjct: 7 LATFKILIIGESGVGKSSLMLRFTEDDFDKDQALTIGVDFKTKIVEIDNVKVKLAIWDTA 66
Query: 58 GK 59
G+
Sbjct: 67 GQ 68
>gi|32398960|emb|CAD98425.1| rab1a protein, probable [Cryptosporidium parvum]
Length = 213
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDE-FTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ QD+ FT Y T G DF + + I ++ +KL +WD G+
Sbjct: 24 GKSCLLLRFAQDDSFTDSYITTIGVDFRFRTIKIDDKIIKLQIWDTAGQ 72
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F+ Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 20 GKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAGQ 67
>gi|298707324|emb|CBJ25951.1| Rab6, RAB family GTPase [Ectocarpus siliculosus]
Length = 217
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F + Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 33 GKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 90
Query: 72 LSSANIS 78
+ ++++
Sbjct: 91 IRDSSVA 97
>gi|154331448|ref|XP_001561542.1| small GTP binding protein rab6-like protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134058860|emb|CAM41428.1| small GTP binding protein rab6-like protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 118
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + TR+ D F +QY PT G DF K + ++ +R V+L LWD G+ E L+ +
Sbjct: 36 GKTSILTRFMYDTFDQQYQPTIGIDFFSKTIHLEDDRDVRLHLWDTAGQ--ERFHSLIPS 93
Query: 71 YL--SSANI 77
Y+ SSA +
Sbjct: 94 YIRNSSATV 102
>gi|417397029|gb|JAA45548.1| Putative gtp-binding protein-like ras superfamily [Desmodus
rotundus]
Length = 203
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|321448228|gb|EFX61364.1| hypothetical protein DAPPUDRAFT_69789 [Daphnia pulex]
Length = 141
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S R+ ++EF + PT G DF K +T++ + V+L LWD G+ E L+ Y
Sbjct: 13 GKSSIINRFIKNEFDSAHNPTVGIDFVSKNVTVKEKSVRLQLWDTAGQ--ERFRSLIPGY 70
Query: 72 LSSAN 76
L ++
Sbjct: 71 LRDSH 75
>gi|296230574|ref|XP_002760764.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Callithrix
jacchus]
Length = 203
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDIAGQ 67
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|432116090|gb|ELK37217.1| Ras-related protein Rab-7L1 [Myotis davidii]
Length = 203
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 27 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 74
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + I+ + +KL +WD G+
Sbjct: 20 GKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWDTAGQ 67
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda
melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 67
>gi|224050100|ref|XP_002195228.1| PREDICTED: ras-related protein Rab-28 [Taeniopygia guttata]
Length = 222
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLK-LLTIQNRGVKLILWDIGGK 59
T G + +TR+ Q+ F +QY T G DF LK +L N V L +WD+GG+
Sbjct: 23 TTGKTSLATRFAQETFGKQYKQTLGLDFFLKRILLPGNLNVTLQVWDVGGQ 73
>gi|322698527|gb|EFY90296.1| small GTP-binding protein YPTI [Metarhizium acridum CQMa 102]
Length = 208
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 26 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 73
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis
niloticus]
Length = 212
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQ 67
>gi|149728237|ref|XP_001488993.1| PREDICTED: ras-related protein Rab-43-like [Equus caballus]
Length = 212
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLV 68
G S +Y ++F+ QY T G DF K LT++ R V + +WD G+ S GL
Sbjct: 20 GKSSLMQQYVNNKFSTQYKATIGADFLNKELTLEGRKVNMQIWDTAGQERFQSLGLA 76
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T + T G DF +K + I + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIWDTAGQ 67
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQIWDTAGQ 67
>gi|239918920|gb|ACS34807.1| RJL family GTPase [Guillardia theta]
gi|428167968|gb|EKX36919.1| hypothetical protein GUITHDRAFT_155108 [Guillardia theta
CCMP2712]
Length = 185
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
G SC RY +++F +Y T G D+ +K + + N+ VK WD+ G
Sbjct: 30 GKSCLIKRYCEEKFVSKYISTIGVDYGVKSVVVSNQQVKANFWDLAG 76
>gi|440790218|gb|ELR11501.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 237
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ DEF + PT G DF ++ + ++ ++L +WD G+ E + K Y
Sbjct: 41 GKSCLLLRFADDEFKPSFLPTIGIDFRVREVAVEGARLRLQIWDTAGQ--ERFRTITKAY 98
Query: 72 LSSA 75
A
Sbjct: 99 YRGA 102
>gi|355714954|gb|AES05174.1| ras-related protein Rab-43-like protein [Mustela putorius furo]
Length = 211
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus
scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus
scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus
scrofa]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWDIAGQ 67
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 24 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 71
>gi|126649339|ref|XP_001388341.1| rab1a protein [Cryptosporidium parvum Iowa II]
gi|126117435|gb|EAZ51535.1| rab1a protein, putative [Cryptosporidium parvum Iowa II]
Length = 208
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDE-FTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ QD+ FT Y T G DF + + I ++ +KL +WD G+
Sbjct: 19 GKSCLLLRFAQDDSFTDSYITTIGVDFRFRTIKIDDKIIKLQIWDTAGQ 67
>gi|431897221|gb|ELK06483.1| Ras-related protein Rab-28 [Pteropus alecto]
Length = 221
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTVGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|19424290|ref|NP_598274.1| ras-related protein Rab-7L1 [Rattus norvegicus]
gi|81910561|sp|Q63481.1|RAB7L_RAT RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1; AltName: Full=Ras-related
protein Rab-29
gi|1235593|emb|CAA65444.1| GTPase [Rattus norvegicus]
gi|149058655|gb|EDM09812.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
gi|149058656|gb|EDM09813.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 204
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 70
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|359322066|ref|XP_003639768.1| PREDICTED: ras-related protein Rab-43-like [Canis lupus
familiaris]
Length = 212
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|323455023|gb|EGB10892.1| hypothetical protein AURANDRAFT_21828 [Aureococcus
anophagefferens]
Length = 226
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKA 60
G + +TR++ DEFT+ Y T G DF +K L + + V + +WDIGG++
Sbjct: 23 GKTSIATRFSSDEFTQSYKQTIGLDFFIKHLILPGDVHVAMQMWDIGGQS 72
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 38 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 85
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName:
Full=Ras-related protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|395847163|ref|XP_003796253.1| PREDICTED: ras-related protein Rab-43 [Otolemur garnettii]
Length = 212
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLDIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|334342428|ref|XP_001378446.2| PREDICTED: ras-related protein Rab-43-like [Monodelphis
domestica]
Length = 210
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 28 GKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 85
Query: 72 LSSAN 76
SAN
Sbjct: 86 YRSAN 90
>gi|301786128|ref|XP_002928478.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Ailuropoda
melanoleuca]
gi|281339455|gb|EFB15039.1| hypothetical protein PANDA_018438 [Ailuropoda melanoleuca]
Length = 203
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|254572922|ref|XP_002493570.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
gi|238033369|emb|CAY71391.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
Length = 203
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K L + ++ V+L LWD G+ E LV +Y
Sbjct: 17 GKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDTAGQ--ERFRSLVPSY 74
Query: 72 LSSANIS 78
+ +N++
Sbjct: 75 IRDSNVA 81
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 33 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 80
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 26 GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 83
Query: 72 LSSANIS 78
+ ++++
Sbjct: 84 IRDSSVA 90
>gi|402887099|ref|XP_003906942.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Papio anubis]
gi|402887101|ref|XP_003906943.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Papio anubis]
Length = 212
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 56 GKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 103
>gi|238581626|ref|XP_002389670.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
gi|215452189|gb|EEB90600.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
Length = 120
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 68
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + ++ +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQ 67
>gi|114794557|pdb|2HUP|A Chain A, Crystal Structure Of Human Rab43 In Complex With Gdp
gi|114794558|pdb|2HUP|B Chain B, Crystal Structure Of Human Rab43 In Complex With Gdp
Length = 201
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 41 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 98
Query: 72 LSSAN 76
SAN
Sbjct: 99 YRSAN 103
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQ 67
>gi|323455818|gb|EGB11686.1| hypothetical protein AURANDRAFT_69665 [Aureococcus
anophagefferens]
Length = 208
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + RY +D F+ +Y T G D+ K +TI ++ VKL +WD G+
Sbjct: 21 GKTSLVVRYDEDTFSTKYMTTIGVDYRDKFVTIDDQNVKLQIWDTAGQ 68
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC
A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC
A4]
Length = 200
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 19 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 66
>gi|417397375|gb|JAA45721.1| Putative gtp-binding protein [Desmodus rotundus]
Length = 221
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTVGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ L + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWDTAGQ 67
>gi|348675957|gb|EGZ15775.1| hypothetical protein PHYSODRAFT_561505 [Phytophthora sojae]
Length = 218
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 6 IKVL-----TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKA 60
IKVL G + RY D F+ + T G DF LK +T+ V+L LWDI G+
Sbjct: 14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ- 72
Query: 61 NESSAGLVKTYLSSA 75
E L + Y A
Sbjct: 73 -EHFRALNRVYYKDA 86
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 40 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 87
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|118376794|ref|XP_001021578.1| Ras family protein [Tetrahymena thermophila]
gi|89303345|gb|EAS01333.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777810|dbj|BAJ21301.1| Rab-family small GTPase RabX10 [Tetrahymena thermophila]
Length = 207
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC +Y F + T G DF +K+L IQ+ VK+ LWD G+
Sbjct: 19 GKSCLLLQYCDQTFQPTHVATVGIDFKMKVLQIQDSTVKMQLWDTAGQ 66
>gi|145532455|ref|XP_001451983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834449|emb|CAI44549.1| rab_B01 [Paramecium tetraurelia]
gi|124419660|emb|CAK84586.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S RY D+F+ Y T G DF K + +G+KL +WD G+
Sbjct: 21 GKSSLLIRYADDKFSENYISTIGVDFKFKTFQLDGKGLKLQIWDTAGQ 68
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 68
>gi|183232546|ref|XP_655103.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801978|gb|EAL49717.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709304|gb|EMD48591.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +F Y T G DF K +T QN+ ++L +WD G+ E L+ +Y
Sbjct: 18 GKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ--ERYRSLIPSY 75
Query: 72 LSSA 75
+ +
Sbjct: 76 IRDS 79
>gi|145516685|ref|XP_001444231.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834389|emb|CAI44532.1| rab_B33 [Paramecium tetraurelia]
gi|124411642|emb|CAK76834.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+ D+F Y T G DF K L + +GVKL +WD G+
Sbjct: 17 GKSSLLIRFCDDQFRDMYLSTIGVDFRFKSLRVNGQGVKLQIWDTAGQ 64
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 21 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 68
>gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe 972h-]
gi|134131|sp|P17608.1|RYH1_SCHPO RecName: Full=GTP-binding protein ryh1
gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe]
gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe]
Length = 201
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum
CS3096]
Length = 202
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 16 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 63
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis
UAMH 10762]
Length = 201
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|117939067|dbj|BAF36687.1| Small G Protein RAB [Symbiotic protist of Reticulitermes
speratus]
Length = 193
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D FT Y T G DF + + + + +KL +WD G+
Sbjct: 10 GKSCLLLRFADDSFTESYISTIGVDFKFRTVEVDGKIIKLQIWDTAGQ 57
>gi|56790148|dbj|BAD82870.1| small GTPase EhRabX22 [Entamoeba histolytica]
Length = 192
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +F Y T G DF K +T QN+ ++L +WD G+ E L+ +Y
Sbjct: 14 GKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ--ERYRSLIPSY 71
Query: 72 LSSAN 76
+ ++
Sbjct: 72 IRDSS 76
>gi|73951461|ref|XP_535076.2| PREDICTED: ras-related protein Rab-28 isoform 2 [Canis lupus
familiaris]
Length = 221
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|281347015|gb|EFB22599.1| hypothetical protein PANDA_006037 [Ailuropoda melanoleuca]
Length = 196
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 14 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 71
Query: 72 LSSAN 76
SAN
Sbjct: 72 YRSAN 76
>gi|145526450|ref|XP_001449036.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834509|emb|CAI44567.1| rab_A33 [Paramecium tetraurelia]
gi|124416602|emb|CAK81639.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+ D+F Y T G DF K L + +GVKL +WD G+
Sbjct: 17 GKSSLLIRFCDDQFRDMYLSTIGVDFRFKSLRVNGQGVKLQIWDTAGQ 64
>gi|58037191|ref|NP_081571.1| ras-related protein Rab-28 [Mus musculus]
gi|46577110|sp|Q99KL7.1|RAB28_MOUSE RecName: Full=Ras-related protein Rab-28; Flags: Precursor
gi|13435428|gb|AAH04580.1| RAB28, member RAS oncogene family [Mus musculus]
gi|74197162|dbj|BAE35127.1| unnamed protein product [Mus musculus]
gi|112293017|dbj|BAF02886.1| Rab28 [Mus musculus]
Length = 221
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 24 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 71
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|410971408|ref|XP_003992161.1| PREDICTED: uncharacterized protein LOC101087341 [Felis catus]
Length = 832
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 649 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 706
Query: 72 LSSANIS 78
+ + ++
Sbjct: 707 IRDSTVA 713
>gi|213410657|ref|XP_002176098.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
gi|212004145|gb|EEB09805.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|290983208|ref|XP_002674321.1| rab family small GTPase [Naegleria gruberi]
gi|284087910|gb|EFC41577.1| rab family small GTPase [Naegleria gruberi]
Length = 224
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 4 LYIKVLTEGTS-----CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGV-KLILWDIG 57
L++K+L G S C RYT +E+ Y T G DF +K +QN+ V ++ LWD
Sbjct: 8 LFVKILLVGDSGAGKTCLILRYTDNEYNDTYQSTIGVDFKIKNKLMQNQKVARMQLWDTA 67
Query: 58 GKANESSAGLVKTYLSSAN 76
G+ E +V +Y N
Sbjct: 68 GQ--ERFNSIVVSYYRGVN 84
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|12848935|dbj|BAB28144.1| unnamed protein product [Mus musculus]
gi|148705628|gb|EDL37575.1| RAB28, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 193
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|388514011|gb|AFK45067.1| unknown [Lotus japonicus]
Length = 210
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D+F + T G DF +K + + ++ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAGQ 67
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|123401208|ref|XP_001301812.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736246|gb|AAX97452.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121883039|gb|EAX88882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + R DEF+ QY T G DF K + +Q R V L +WD G+ E L+ +Y
Sbjct: 16 GKTSLLNRLMTDEFSNQYNTTIGVDFFTKPVQVQGRTVTLQIWDTAGQ--ERFKSLMPSY 73
Query: 72 LSSANIS 78
+ ++++
Sbjct: 74 IRDSSVA 80
>gi|326431353|gb|EGD76923.1| Ras family domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 228
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RY + FTR+Y T G DF K L+++ ++L++WD G+ E L K Y
Sbjct: 21 GKSSMIQRYCKGIFTREYKKTIGVDFLEKKLSVKGEELRLMIWDTAGQ--EEFDSLTKAY 78
Query: 72 LSSAN 76
A
Sbjct: 79 YRDAE 83
>gi|302838089|ref|XP_002950603.1| hypothetical protein VOLCADRAFT_104739 [Volvox carteri f.
nagariensis]
gi|300264152|gb|EFJ48349.1| hypothetical protein VOLCADRAFT_104739 [Volvox carteri f.
nagariensis]
Length = 207
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKAN 61
G SC RY +++F +Y PT G D+ +K + V++ LWD+ G A+
Sbjct: 31 GKSCLIKRYCEEKFVSKYIPTIGVDYGVKPNKYNDYEVRVNLWDLAGGAD 80
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 32 GKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 89
Query: 72 LSSAN 76
SAN
Sbjct: 90 YRSAN 94
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|290986863|ref|XP_002676143.1| rab family small GTPase [Naegleria gruberi]
gi|284089743|gb|EFC43399.1| rab family small GTPase [Naegleria gruberi]
Length = 201
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVK 69
G SC RY+ D F + T G DF LK ++ N K+ +WD G + +AG K
Sbjct: 22 GKSCMLLRYSDDRFLENHMATIGVDFKLKKESVGNYKAKIQIWDTGYRFRSITAGYYK 79
>gi|301122745|ref|XP_002909099.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099861|gb|EEY57913.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 6 IKVL-----TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKA 60
IKVL G + RY D F+ + T G DF LK +T+ V+L LWDI G+
Sbjct: 14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVSGTTVRLQLWDIAGQ- 72
Query: 61 NESSAGLVKTYLSSA 75
E L + Y A
Sbjct: 73 -EHFRALNRVYYKDA 86
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGL 67
G + ++ ++F+ QY T G DF K LTI N+ V L +WD G+ S G+
Sbjct: 20 GKTSLMQQFVNNKFSHQYKATIGADFLTKDLTIDNKTVSLQIWDTAGQERFQSLGV 75
>gi|198432465|ref|XP_002125663.1| PREDICTED: similar to RAB28, member RAS oncogene family [Ciona
intestinalis]
Length = 210
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTSCFS---TRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +G S + TRYTQD+F + Y T G DF+LK + + N V L + D+GG+
Sbjct: 14 LKIVVLGDGGSGKTSTITRYTQDQFVKSYDQTLGVDFYLKRIVLPGNHNVTLQVCDVGGQ 73
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|340371509|ref|XP_003384288.1| PREDICTED: ras-related protein Rab-28-like [Amphimedon
queenslandica]
Length = 228
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNR-GVKLILWDIGGKANESSAGLV 68
T G + +TR +Q+ FT++Y T G DF+L+ L + V L +WDIGG+ ++
Sbjct: 20 TTGKTSLATRISQNNFTKKYDQTLGVDFYLRRLELPGAVQVTLQVWDIGGQT--VGGKML 77
Query: 69 KTYLSSAN 76
+ Y+ AN
Sbjct: 78 ENYIYGAN 85
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+T+D + Y T G DF +K + + + +K +WD G+
Sbjct: 21 GKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWDTAGQ 68
>gi|178056548|ref|NP_001116647.1| ras-related protein Rab-28 [Sus scrofa]
gi|115394770|gb|ABI97179.1| RB28 [Sus scrofa]
Length = 221
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|403268268|ref|XP_003926200.1| PREDICTED: ras-related protein Rab-43 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|344275963|ref|XP_003409780.1| PREDICTED: ras-related protein Rab-43-like [Loxodonta africana]
Length = 212
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGNTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|340501363|gb|EGR28156.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + R+ D FT PT G DF K ++++N+ ++L LWD G+ E L+ +Y
Sbjct: 24 GKTSIINRFIYDNFTGSEQPTVGIDFICKTISLENKTLRLQLWDTAGQ--ERFKSLIPSY 81
Query: 72 LSSAN 76
+ +N
Sbjct: 82 IRDSN 86
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|148705630|gb|EDL37577.1| RAB28, member RAS oncogene family, isoform CRA_e [Mus musculus]
Length = 192
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|167533239|ref|XP_001748299.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773111|gb|EDQ86754.1| predicted protein [Monosiga brevicollis MX1]
Length = 228
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 6 IKVLTEGTSCFST---RYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKAN 61
I VL GTS ++ RY QD F Y T G DF +K L + ++ V L +WDIGG+A
Sbjct: 13 IVVLGNGTSGKTSVIRRYCQDGFGNAYNQTIGLDFFMKRLNLPGDKYVTLQIWDIGGQA- 71
Query: 62 ESSAGLVKTYLSSA 75
+++ YL +A
Sbjct: 72 -IGGKMIRNYLENA 84
>gi|170588923|ref|XP_001899223.1| Ras family protein [Brugia malayi]
gi|158593436|gb|EDP32031.1| Ras family protein [Brugia malayi]
Length = 209
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K + I+ + VKL +WD GG+ E + ++Y
Sbjct: 22 GKTCVVQRFKNGTFIERQGTTIGVDFSMKTMIIEGKRVKLQIWDTGGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|432889390|ref|XP_004075253.1| PREDICTED: ras-related protein Rab-1A-like [Oryzias latipes]
Length = 221
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 28 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQ 75
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 48 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQ 95
>gi|149058657|gb|EDM09814.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGKANESSAGLVKT 70
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+ E + +
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ--ERFTSMTRL 76
Query: 71 YLSSAN 76
Y A+
Sbjct: 77 YYRDAS 82
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 110 GKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 157
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 43 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 90
>gi|440297920|gb|ELP90561.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + +Y F + Y PT G DF +K+ T+ ++ V+L LWDI G+ E + + Y
Sbjct: 21 GKTSTIRKYCHGVFDQLYRPTIGVDFAVKMTTVDDKDVELRLWDIAGQ--EKYIAMTRVY 78
Query: 72 LSSAN 76
+ A+
Sbjct: 79 YNGAH 83
>gi|410957907|ref|XP_003985565.1| PREDICTED: ras-related protein Rab-28 isoform 1 [Felis catus]
Length = 221
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|19114436|ref|NP_593524.1| GTPase Ypt71 [Schizosaccharomyces pombe 972h-]
gi|74698144|sp|Q9HDY0.1|YPT71_SCHPO RecName: Full=GTP-binding protein ypt71
gi|12188974|emb|CAC21483.1| GTPase Ypt71 [Schizosaccharomyces pombe]
Length = 208
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGL 67
G +C ++ +F+R+Y T G DF K + + ++ V L LWD G+ S G+
Sbjct: 20 GKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGM 75
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|60834171|gb|AAX37082.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67
>gi|16758874|ref|NP_446430.1| ras-related protein Rab-28 [Rattus norvegicus]
gi|1710025|sp|P51158.1|RAB28_RAT RecName: Full=Ras-related protein Rab-28; Flags: Precursor
gi|1154901|emb|CAA55340.1| ras-homologous GTPase rab28 [Rattus norvegicus]
gi|149047304|gb|EDL99973.1| RAB28, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
gi|149047309|gb|EDL99978.1| RAB28, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQ 67
>gi|194227608|ref|XP_001496437.2| PREDICTED: hypothetical protein LOC100065954 [Equus caballus]
Length = 430
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGKANE 62
L I L G + RY F++ Y T G DF LK+L NR V+L LWDI G+ E
Sbjct: 234 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDIAGQ--E 291
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 292 RFGNMTRVYYKEA 304
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 25 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAG 66
G + +Y FT+QY T G DF K +TI +R V L +WD G+ S G
Sbjct: 21 GKTSLMNQYVNQRFTQQYRATVGADFMAKEVTIDDRMVTLQIWDTAGQERFQSLG 75
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|403072080|pdb|4FMD|F Chain F, Espg-Rab1 Complex Structure At 3.05 A
Length = 164
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 11 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 58
>gi|344279086|ref|XP_003411322.1| PREDICTED: ras-related protein Rab-28-like isoform 1 [Loxodonta
africana]
Length = 221
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|149703164|ref|XP_001500973.1| PREDICTED: ras-related protein Rab-28-like isoform 1 [Equus
caballus]
Length = 221
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|149047308|gb|EDL99977.1| RAB28, member RAS oncogene family, isoform CRA_e [Rattus
norvegicus]
Length = 193
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|149047307|gb|EDL99976.1| RAB28, member RAS oncogene family, isoform CRA_d [Rattus
norvegicus]
Length = 194
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|73951459|ref|XP_862740.1| PREDICTED: ras-related protein Rab-28 isoform 3 [Canis lupus
familiaris]
Length = 220
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|4506375|ref|NP_003920.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|197101399|ref|NP_001126387.1| ras-related protein Rab-7L1 [Pongo abelii]
gi|208609962|ref|NP_001129134.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|114572136|ref|XP_001162514.1| PREDICTED: uncharacterized protein LOC469654 isoform 4 [Pan
troglodytes]
gi|332248154|ref|XP_003273227.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Nomascus
leucogenys]
gi|332248156|ref|XP_003273228.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Nomascus
leucogenys]
gi|332811507|ref|XP_001162387.2| PREDICTED: uncharacterized protein LOC469654 isoform 1 [Pan
troglodytes]
gi|397504834|ref|XP_003822985.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|397504836|ref|XP_003822986.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|13633364|sp|O14966.1|RAB7L_HUMAN RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|75054849|sp|Q5R7A4.1|RAB7L_PONAB RecName: Full=Ras-related protein Rab-7L1; AltName:
Full=Rab-7-like protein 1
gi|2388544|dbj|BAA22160.1| small GTP-binding protein [Homo sapiens]
gi|12803517|gb|AAH02585.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|49456973|emb|CAG46807.1| RAB7L1 [Homo sapiens]
gi|54695950|gb|AAV38347.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|55731284|emb|CAH92356.1| hypothetical protein [Pongo abelii]
gi|61357258|gb|AAX41360.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
gi|119611986|gb|EAW91580.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|119611987|gb|EAW91581.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|123982028|gb|ABM82843.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|124000657|gb|ABM87837.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|157928318|gb|ABW03455.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|261859934|dbj|BAI46489.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|410211350|gb|JAA02894.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211352|gb|JAA02895.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211354|gb|JAA02896.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211356|gb|JAA02897.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211358|gb|JAA02898.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211360|gb|JAA02899.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211362|gb|JAA02900.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256832|gb|JAA16383.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256834|gb|JAA16384.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256836|gb|JAA16385.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256838|gb|JAA16386.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287094|gb|JAA22147.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287096|gb|JAA22148.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287098|gb|JAA22149.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287100|gb|JAA22150.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287102|gb|JAA22151.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329207|gb|JAA33550.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329209|gb|JAA33551.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329211|gb|JAA33552.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
Length = 203
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67
>gi|118361951|ref|XP_001014203.1| Ras family protein [Tetrahymena thermophila]
gi|89295970|gb|EAR93958.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777808|dbj|BAJ21300.1| Rab-family small GTPase Rab8B [Tetrahymena thermophila]
Length = 204
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +CF Y + FTR + PT G D+ K + + VKL +WD G+
Sbjct: 22 GKTCFLVNYCKKSFTRIHLPTIGIDYEHKYEDVDGKHVKLQIWDTAGQ 69
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I + +KL +WD G+
Sbjct: 45 GKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWDTAGQ 92
>gi|355714887|gb|AES05150.1| RAB28, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 921 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 968
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQ 67
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D + Y T G DF ++ + +Q + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWDTAGQ 67
>gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 248
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 37 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 84
>gi|301774833|ref|XP_002922840.1| PREDICTED: ras-related protein Rab-32-like [Ailuropoda melanoleuca]
Length = 281
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGKANE 62
L I L G + RY F++ Y T G DF LK+L NR V+L LWDI G+ E
Sbjct: 85 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDIAGQ--E 142
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 143 RFGNMTRVYYREA 155
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQ 70
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 995 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 1042
>gi|76154260|gb|AAX25750.2| SJCHGC02927 protein [Schistosoma japonicum]
Length = 200
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
L I + G S RY D F++ Y T G DF +K + I N VKL +WD G+
Sbjct: 14 LLIGDMNVGKSSLLFRYIDDGFSKTYMSTIGVDFKVKTVMIGNTRVKLQIWDTAGQ 69
>gi|55731507|emb|CAH92465.1| hypothetical protein [Pongo abelii]
Length = 203
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67
>gi|348553989|ref|XP_003462808.1| PREDICTED: ras-related protein Rab-43-like [Cavia porcellus]
Length = 210
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 28 GKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 85
Query: 72 LSSAN 76
SAN
Sbjct: 86 YRSAN 90
>gi|345306404|ref|XP_001509675.2| PREDICTED: hypothetical protein LOC100078661 [Ornithorhynchus
anatinus]
Length = 666
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 7 KVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
K++ + TS + R+ Q+ F +QY T G DF LK +T+ N V L +WDIGG+
Sbjct: 18 KLVIDETS-LAIRFAQEAFGKQYKQTVGLDFFLKRITLPGNLNVTLQVWDIGGQ 70
>gi|157835119|pdb|2HXS|A Chain A, Crystal Structure Of Rab28a Gtpase In The Inactive
(Gdp-3'p- Bound) Form
gi|197305216|pdb|3E5H|A Chain A, Crystal Structure Of Rab28 Gtpase In The Active
(Gppnhp-Bound) Form
Length = 178
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 1 MAPLYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDI 56
M L I VL +G S +T + Q+ F +QY T G DF L+ +T+ N V L +WDI
Sbjct: 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDI 63
Query: 57 GGK 59
GG+
Sbjct: 64 GGQ 66
>gi|344279088|ref|XP_003411323.1| PREDICTED: ras-related protein Rab-28-like isoform 2 [Loxodonta
africana]
Length = 220
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|54696028|gb|AAV38386.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|61367282|gb|AAX42976.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGGDFALKVLQWSDYEIVRLQLWDIAGQ 67
>gi|340505433|gb|EGR31760.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 223
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
++I + G S R+ D FT PT G DF K L ++N+ ++L LWD G+ E
Sbjct: 16 VFIGDQSVGKSSIINRFMYDNFTGTQQPTVGIDFVAKTLHLENKTIRLQLWDTAGQ--ER 73
Query: 64 SAGLVKTYLSSAN 76
L+ +Y+ ++
Sbjct: 74 FRSLIPSYIRDSD 86
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 51 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 98
>gi|149047303|gb|EDL99972.1| RAB28, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149047306|gb|EDL99975.1| RAB28, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 192
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|301764549|ref|XP_002917698.1| PREDICTED: ras-related protein Rab-43-like [Ailuropoda
melanoleuca]
Length = 218
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 36 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 93
Query: 72 LSSAN 76
SAN
Sbjct: 94 YRSAN 98
>gi|432892465|ref|XP_004075794.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 212
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L I L G + RY F+ Y T G DF LK+L + V+L LWDI G+ E
Sbjct: 14 LVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWEQETVRLQLWDIAGQ--ER 71
Query: 64 SAGLVKTYLSSA 75
+ + Y A
Sbjct: 72 FGNMTRVYYREA 83
>gi|50747208|ref|XP_420785.1| PREDICTED: ras-related protein Rab-28 [Gallus gallus]
Length = 222
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
T G + + R+ Q+ F +QY T G DF+LK + + N V L +WD+GG+
Sbjct: 23 TAGKTSLAMRFAQETFGKQYKQTIGLDFYLKRIILPGNLNVTLQVWDVGGQ 73
>gi|412986644|emb|CCO15070.1| predicted protein [Bathycoccus prasinos]
Length = 258
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 IKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSA 65
IK G SC ++T F R + T G +F +++TI N+ VKL +WD G+ ES
Sbjct: 36 IKNARVGKSCLLLQFTDKRFQRVHDLTIGVEFGSRMVTINNQQVKLQIWDTAGQ--ESFR 93
Query: 66 GLVKTYLSSA 75
+ ++Y A
Sbjct: 94 SITRSYYRGA 103
>gi|410957909|ref|XP_003985566.1| PREDICTED: ras-related protein Rab-28 isoform 2 [Felis catus]
Length = 220
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|395859510|ref|XP_003802081.1| PREDICTED: ras-related protein Rab-28 [Otolemur garnettii]
Length = 220
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|340500975|gb|EGR27802.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 254
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S R++ D+F Y T G DF K L I + +KL +WD G+ E + Y
Sbjct: 21 GKSSILMRFSDDQFNESYLTTIGVDFRFKTLNIDQKLIKLQIWDTAGQ--ERFRTITNAY 78
Query: 72 LSSANI 77
A++
Sbjct: 79 YKGADV 84
>gi|338723745|ref|XP_003364786.1| PREDICTED: ras-related protein Rab-28-like isoform 2 [Equus
caballus]
Length = 220
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|297263149|ref|XP_001094209.2| PREDICTED: ras-related protein Rab-43-like [Macaca mulatta]
Length = 270
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RY ++ F ++ T G DF +K + + + VKL +WD G+ E L +Y
Sbjct: 44 GKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTAGQ--ERFRTLTSSY 101
Query: 72 LSSAN 76
A+
Sbjct: 102 YRGAH 106
>gi|222619160|gb|EEE55292.1| hypothetical protein OsJ_03242 [Oryza sativa Japonica Group]
Length = 538
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 17 STRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGL 67
S RY +F++QY T G DF K + I++R V L +WD G+ S G+
Sbjct: 378 SVRYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGV 428
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 183
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
L + L G + RY + F+R+Y T G DF KL+ I +++ V+L LWDI G+ E
Sbjct: 5 LVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAGQ--E 62
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 63 RYGNMTRVYYREA 75
>gi|47938972|gb|AAH72512.1| Rab28 protein [Rattus norvegicus]
Length = 220
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 1 MAPLYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
M L I G SC R+ D+F + T G DF +K + I + KL LWD G+
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKTKLQLWDTAGQ 79
>gi|255640576|gb|ACU20573.1| unknown [Glycine max]
Length = 213
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K +T+ + VKL +WD G+ E + ++Y
Sbjct: 33 GKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDGKKVKLQIWDTAGQ--ERFRTITQSY 90
Query: 72 LSSAN 76
SAN
Sbjct: 91 YRSAN 95
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4
homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 21 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 68
>gi|410986335|ref|XP_003999466.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Felis catus]
Length = 203
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY+QD F + Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFNKHYKSTVGVDFALKVLQWSDSEVVRLQLWDIAGQ 67
>gi|356541335|ref|XP_003539133.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 236
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 70
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 66 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 113
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
Length = 181
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K +T+ + VKL +WD G+ E + ++Y
Sbjct: 33 GKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDGKKVKLQIWDTAGQ--ERFRTITQSY 90
Query: 72 LSSAN 76
SAN
Sbjct: 91 YRSAN 95
>gi|168002794|ref|XP_001754098.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162694652|gb|EDQ80999.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 27 GKTSIITRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 84
Query: 72 LSSANIS 78
+ ++++
Sbjct: 85 IRDSSVA 91
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
Length = 175
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
>gi|1154852|emb|CAA64364.1| rab28 [Homo sapiens]
Length = 220
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 72
>gi|387593477|gb|EIJ88501.1| rab-protein 1-PB [Nematocida parisii ERTm3]
gi|387597129|gb|EIJ94749.1| rab-protein 1-PB [Nematocida parisii ERTm1]
Length = 201
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RYT + Y T G DF +K + + ++ VKL LWD G+ E + +Y
Sbjct: 19 GKTCILLRYTDSIYKETYGTTIGVDFKMKNILVNDKAVKLQLWDTAGQ--ERFRTITSSY 76
Query: 72 LSSAN 76
+AN
Sbjct: 77 YRNAN 81
>gi|340500338|gb|EGR27225.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 419
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R++ D+F Y T G DF K L I + +KL +WD G+
Sbjct: 20 GKSSLLLRFSDDQFNENYLATIGVDFRFKKLQIDGKKIKLQIWDTAGQ 67
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|321443485|gb|EFX60106.1| hypothetical protein DAPPUDRAFT_9923 [Daphnia pulex]
Length = 78
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC +RY ++FT +Y T G DF K + + KL +WD G+
Sbjct: 12 GKSCILSRYCDNKFTEAFYNTIGVDFKTKTQLVDGKKCKLQIWDTAGQ 59
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|123436113|ref|XP_001309109.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736280|gb|AAX97469.1| small Rab GTPase RabC3 [Trichomonas vaginalis]
gi|121890821|gb|EAX96179.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC RYTQ F PT G F K+++ + V+L LWD G+ E L Y
Sbjct: 15 GKSCIGARYTQGTFDGDTTPTIGAAFLTKVISTEKGSVRLQLWDTAGQ--EKFKSLAPMY 72
Query: 72 LSSANI 77
SA +
Sbjct: 73 NRSAGV 78
>gi|417408694|gb|JAA50887.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 212
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 30 GKTCVVQRFKTGVFSERQSSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 87
Query: 72 LSSAN 76
SAN
Sbjct: 88 YRSAN 92
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 18 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 65
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F ++ T G DF +K + ++ + VKL +WD G+ E + ++Y
Sbjct: 33 GKTCIVERFKTGNFVERHGNTIGVDFSMKTIAVEGKQVKLQIWDTAGQ--ERFRTITQSY 90
Query: 72 LSSAN 76
SAN
Sbjct: 91 YRSAN 95
>gi|225427294|ref|XP_002281823.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
gi|147782540|emb|CAN75036.1| hypothetical protein VITISV_014840 [Vitis vinifera]
Length = 208
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|146181225|ref|XP_001022351.2| Ras family protein [Tetrahymena thermophila]
gi|146144246|gb|EAS02106.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777818|dbj|BAJ21305.1| Rab-family small GTPase Rab2F [Tetrahymena thermophila]
Length = 235
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ D F Y T G +F K++ + N +K+ +WD G+ ES + ++Y
Sbjct: 19 GKSCMLLRFVDDRFREDYDATIGVEFGSKIIDVANLAIKIQIWDTAGQ--ESFRSITRSY 76
Query: 72 LSSA 75
A
Sbjct: 77 YKGA 80
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + ++ + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQ 70
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|391337022|ref|XP_003742873.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Metaseiulus occidentalis]
Length = 571
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S R+ Q +F + T G DF +K +T++ R V L LWD G+ E + K Y
Sbjct: 397 GKSSLINRFCQGQFVPSFNATIGVDFRVKSVTVEGRPVALQLWDTAGQ--ERFRSITKQY 454
Query: 72 LSSAN 76
A+
Sbjct: 455 FRKAD 459
>gi|341890273|gb|EGT46208.1| hypothetical protein CAEBREN_29374 [Caenorhabditis brenneri]
Length = 210
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L I + VKL +WD GG+ E + ++Y
Sbjct: 22 GKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNIDGKRVKLQIWDTGGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D F Y T G DF ++ + I + +KL +WD G+
Sbjct: 20 GKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWDTAGQ 67
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 26 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 73
>gi|403294870|ref|XP_003938385.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 203
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRG-VKLILWDIGGK 59
G + RY QD F++ Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYCQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWDIAGQ 67
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQ 69
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis]
Length = 186
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
L + L G + RY + F+R+Y T G DF KL+ I +++ V+L LWDI G+ E
Sbjct: 5 LVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAGQ--E 62
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 63 RYGNMTRVYYREA 75
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + TR+ D F +QY T G DF K++T+ + ++L LWD G+
Sbjct: 32 GKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 240 GKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 297
Query: 72 LSSAN 76
SAN
Sbjct: 298 YRSAN 302
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|340960222|gb|EGS21403.1| hypothetical protein CTHT_0032610 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 174
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 70
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|357116841|ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 293
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 106 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 163
Query: 72 LSSANIS 78
+ ++++
Sbjct: 164 IRDSSVA 170
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 75 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 122
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQ 69
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 21 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 68
>gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis]
gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis]
gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
L + L G + RY + F+R+Y T G DF KL+ I +++ V+L LWDI G+ E
Sbjct: 5 LVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAGQ--E 62
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 63 RYGNMTRVYYREA 75
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQ 69
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQ 68
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 28 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 75
>gi|384247403|gb|EIE20890.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 24 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 81
Query: 72 LSSANIS 78
+ ++++
Sbjct: 82 IRDSSVA 88
>gi|344257913|gb|EGW14017.1| Ras-related protein Rab-23 [Cricetulus griseus]
Length = 236
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RY +D FT+ Y T G DF + + + + V+L+LWD G+ E + K Y
Sbjct: 20 GKSSMIQRYCKDIFTKDYNKTIGVDFLERQIQVNDEDVRLMLWDTAGQ--EEFDAITKAY 77
Query: 72 LSSA 75
A
Sbjct: 78 YRGA 81
>gi|301767354|ref|XP_002919097.1| PREDICTED: ras-related protein Rab-28-like [Ailuropoda
melanoleuca]
Length = 221
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSVATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|66801327|ref|XP_629589.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996490|sp|Q54DA7.1|RAB4_DICDI RecName: Full=Ras-related protein Rab-4
gi|60462986|gb|EAL61182.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC R+ ++F Q T G DF +++ IQ + VKL +WD G+ S ++ Y
Sbjct: 19 GKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSV-VISYY 77
Query: 72 LSSANIS 78
SA ++
Sbjct: 78 RGSAGVA 84
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 18 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 65
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWDTAGQ 67
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 30 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 77
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+ +D + Y T G DF +K + + + VKL +WD G+
Sbjct: 20 GKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQ 67
>gi|354491629|ref|XP_003507957.1| PREDICTED: ras-related protein Rab-23-like [Cricetulus griseus]
Length = 237
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RY +D FT+ Y T G DF + + + + V+L+LWD G+ E + K Y
Sbjct: 21 GKSSMIQRYCKDIFTKDYNKTIGVDFLERQIQVNDEDVRLMLWDTAGQ--EEFDAITKAY 78
Query: 72 LSSA 75
A
Sbjct: 79 YRGA 82
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|198436228|ref|XP_002119506.1| PREDICTED: similar to Rab3 [Ciona intestinalis]
Length = 220
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 34 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 81
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|351723117|ref|NP_001235476.1| uncharacterized protein LOC100527651 [Glycine max]
gi|255632858|gb|ACU16782.1| unknown [Glycine max]
Length = 213
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 27 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQ 74
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 15 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|15224916|ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|297828175|ref|XP_002881970.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|75318653|sp|O80501.1|RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b;
AltName: Full=Ras-related protein Rab6A; Short=AtRab6A
gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana]
gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|297327809|gb|EFH58229.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|741994|prf||2008312A GTP-binding protein
Length = 208
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 55 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 102
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + R+ FT +Y T G DF +K + I+ + VKL +WD G+ E + ++Y
Sbjct: 29 GKTSLVQRFKSGVFTERYTNTIGVDFAMKTIVIEGKQVKLQIWDTAGQ--ERFRTITQSY 86
Query: 72 LSSAN 76
SAN
Sbjct: 87 YRSAN 91
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T D F PT G DF LKL+TI + +KL +WD G+
Sbjct: 25 GKSSLLLRFTSDSFD-DLSPTIGVDFKLKLMTIAGKRLKLTIWDTAGQ 71
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|398009439|ref|XP_003857919.1| small GTP binding protein rab6-like protein [Leishmania donovani]
gi|322496122|emb|CBZ31193.1| small GTP binding protein rab6-like protein [Leishmania donovani]
Length = 274
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + TR+ D F +QY PT G DF K + ++ +R V+L LWD G+ E L+ +
Sbjct: 36 GKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQ--ERFHSLIPS 93
Query: 71 YLSSA 75
Y+ ++
Sbjct: 94 YIRNS 98
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGL 67
G + RY +F++QY T G DF K L I +R V L +WD G+ S G+
Sbjct: 20 GKTSLMNRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGV 75
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1
[Oryctolagus cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda
melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|414590929|tpg|DAA41500.1| TPA: hypothetical protein ZEAMMB73_483526 [Zea mays]
Length = 209
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 1 MAPLYIKVLTE-----------GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGV 49
MAP + L + G + TR+ D+F Y T G DF K + +++R V
Sbjct: 1 MAPAVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV 60
Query: 50 KLILWDIGGKANESSAGLVKTYLSSANIS 78
+L LWD G+ E L+ +Y+ ++++
Sbjct: 61 RLQLWDTAGQ--ERFRSLIPSYIRDSSVA 87
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 16 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 63
>gi|340376610|ref|XP_003386825.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + + +R V+L LWD G+ E LV Y
Sbjct: 21 GKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRTVRLQLWDTAGQ--ERFKALVPAY 78
Query: 72 LSSANIS 78
+ + I+
Sbjct: 79 IRDSAIA 85
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T D F + T G DF +KL+ I VKL +WD G+
Sbjct: 20 GKSSLLLRFTDDTFDNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQ 67
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D F Y T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDTAGQ 69
>gi|242046344|ref|XP_002461043.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
gi|241924420|gb|EER97564.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
Length = 209
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 1 MAPLYIKVLTE-----------GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGV 49
MAP + L + G + TR+ D+F Y T G DF K + +++R V
Sbjct: 1 MAPAVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV 60
Query: 50 KLILWDIGGKANESSAGLVKTYLSSANIS 78
+L LWD G+ E L+ +Y+ ++++
Sbjct: 61 RLQLWDTAGQ--ERFRSLIPSYIRDSSVA 87
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ + ++ T G DF +K LT++ + VKL +WD G+ E + ++Y
Sbjct: 22 GKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIWDTAGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|148705626|gb|EDL37573.1| RAB28, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 149
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 4 LYIKVLTEGTS---CFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
L I VL +GTS +T + Q+ F +QY T G DF L+ +T+ N V L +WDIGG+
Sbjct: 13 LKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQ 72
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 33 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 80
>gi|410972687|ref|XP_003992789.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Felis catus]
Length = 208
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
+++ V G + TR+ D F Y T G DF K + +++R V+L LWD G+ E
Sbjct: 17 VFLGVQDVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ER 74
Query: 64 SAGLVKTYLSSANIS 78
L+ +Y+ + ++
Sbjct: 75 FRSLIPSYIRDSTVA 89
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRVKLQIWDTAGQ 69
>gi|340501433|gb|EGR28223.1| hypothetical protein IMG5_181520 [Ichthyophthirius multifiliis]
Length = 735
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RY++ +F PT G DF KLL ++L LWDI G+ E + K Y
Sbjct: 19 GKTCILARYSRGQFDNSCPPTLGMDFSSKLLEYNGNTIRLQLWDIAGQ--ERYTSVSKLY 76
Query: 72 LSSA 75
+ A
Sbjct: 77 VRGA 80
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQ 68
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 15 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis
domestica]
Length = 201
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum
CS3096]
Length = 203
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila
ATCC 42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila
ATCC 42464]
Length = 205
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|218199658|gb|EEC82085.1| hypothetical protein OsI_26083 [Oryza sativa Indica Group]
Length = 244
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|242013254|ref|XP_002427327.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511676|gb|EEB14589.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGKANESSAGLV 68
T G + F RY ++ + R Y T G DF LK+L + + +KL LWDI G+ E +
Sbjct: 28 TVGKTSFVQRYVENTYKRDYKGTVGVDFALKILKWSDTQTIKLQLWDIAGQ--ERFTWMT 85
Query: 69 KTYLSSAN 76
+ Y A+
Sbjct: 86 RVYYKDAH 93
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY D F++ + T G DF +K + + ++ +KL +WD G+
Sbjct: 23 GKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQ 70
>gi|62858653|ref|NP_001016330.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266921|emb|CAJ82248.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 209
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 27 GKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 84
Query: 72 LSSAN 76
SAN
Sbjct: 85 YRSAN 89
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis]
Length = 207
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|441621491|ref|XP_003265428.2| PREDICTED: uncharacterized protein LOC100590410 [Nomascus
leucogenys]
Length = 474
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 308 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 365
Query: 72 LSSANIS 78
+ + ++
Sbjct: 366 IRDSTVA 372
>gi|440803267|gb|ELR24175.1| RabE family small GTPase, partial [Acanthamoeba castellanii str.
Neff]
Length = 155
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + ++ + +KL +WD G+
Sbjct: 29 GKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQ 76
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ + ++ T G DF +K LT++ + VKL +WD G+ E + ++Y
Sbjct: 22 GKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIWDTAGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 45 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 92
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 15 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|86476069|ref|NP_001034483.1| ras-related protein Rab-43 isoform a [Mus musculus]
gi|81914382|sp|Q8CG50.1|RAB43_MOUSE RecName: Full=Ras-related protein Rab-43
gi|26986192|emb|CAD58914.1| Ras-related protein Rab [Mus musculus]
gi|112293049|dbj|BAF02902.1| Rab41 [Mus musculus]
gi|148666805|gb|EDK99221.1| RIKEN cDNA 1810048P08, isoform CRA_c [Mus musculus]
Length = 210
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 28 GKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 85
Query: 72 LSSAN 76
SAN
Sbjct: 86 YRSAN 90
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|66730539|ref|NP_001019502.1| ras-related protein Rab-43 [Rattus norvegicus]
gi|81887426|sp|Q53B90.1|RAB43_RAT RecName: Full=Ras-related protein Rab-43
gi|50898338|gb|AAT86135.1| Ras-related protein RAB43 [Rattus norvegicus]
Length = 210
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 28 GKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 85
Query: 72 LSSAN 76
SAN
Sbjct: 86 YRSAN 90
>gi|321478953|gb|EFX89909.1| hypothetical protein DAPPUDRAFT_39774 [Daphnia pulex]
Length = 175
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G + F RY Q+ F Y T G DF LK++ +N+ +KL LWDI G+ E + +
Sbjct: 27 GKTSFIRRYVQNAFRGDYKATIGVDFALKIVRWSENQTIKLQLWDIAGQ--ERFTWMTRV 84
Query: 71 YLSSAN 76
Y A
Sbjct: 85 YYKEAQ 90
>gi|302833886|ref|XP_002948506.1| RabH/Rab6 [Volvox carteri f. nagariensis]
gi|300266193|gb|EFJ50381.1| RabH/Rab6 [Volvox carteri f. nagariensis]
Length = 211
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|242022587|ref|XP_002431721.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212517036|gb|EEB18983.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+TQ F T G DF +K L I N VKL +WD G+ E + ++Y
Sbjct: 19 GKTCLVRRFTQGLFPPGQGATIGVDFMIKTLEIDNEKVKLQIWDTAGQ--ERFRSITQSY 76
Query: 72 LSSAN 76
SA+
Sbjct: 77 YRSAH 81
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D F + T G DF +K + +Q + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQIWDTAGQ 68
>gi|225453266|ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|32401324|gb|AAP80834.1| GTP-binding protein [Griffithsia japonica]
Length = 154
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 70
>gi|325297096|ref|NP_001191556.1| Rab3 [Aplysia californica]
gi|392973|gb|AAA03315.1| Rab3 [Aplysia californica]
Length = 219
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 37 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 84
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGE 70
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D+F + T G DF +K + I + +KL +WD G+
Sbjct: 24 GKSCLLLRFVDDKFNPSFITTIGIDFKIKTIDINGKRIKLQVWDTAGQ 71
>gi|346321156|gb|EGX90756.1| GTP-binding protein SAS1 [Cordyceps militaris CM01]
Length = 227
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 38 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 85
>gi|222637080|gb|EEE67212.1| hypothetical protein OsJ_24329 [Oryza sativa Japonica Group]
Length = 244
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 67
>gi|154421544|ref|XP_001583785.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918029|gb|EAY22799.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 197
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RYT D F+ Q+ T G DF + + + ++ VK+ +WD G+ E + ++Y
Sbjct: 21 GKSNILLRYTDDLFSNQFISTIGVDFRIHTIDVDDKKVKMQIWDTAGQ--ERFLAITRSY 78
Query: 72 LSSANIS 78
++++
Sbjct: 79 FGYSHVA 85
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 17 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 64
>gi|356563429|ref|XP_003549965.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 213
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|260830581|ref|XP_002610239.1| hypothetical protein BRAFLDRAFT_245828 [Branchiostoma floridae]
gi|229295603|gb|EEN66249.1| hypothetical protein BRAFLDRAFT_245828 [Branchiostoma floridae]
Length = 168
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ +D+FT + T G DF LK + + + +++ +WD G+ E + K Y
Sbjct: 28 GKTCILYRFVEDDFTMSHISTIGIDFKLKTVEVNGKRIRVQIWDTAGQ--ERYETITKQY 85
Query: 72 LSSAN 76
A
Sbjct: 86 YRRAQ 90
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|439536|gb|AAA57054.1| guanine nucleotide regulatory protein [Paramecium tetraurelia]
Length = 126
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 14 SCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
S RYT D F+ Y T G DF K + +G+KL +WD G+
Sbjct: 2 SSLLVRYTDDTFSENYISTIGVDFKFKTFRLDGKGLKLQIWDTAGQ 47
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 140 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 187
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|340504917|gb|EGR31311.1| rab2 gtpase, putative [Ichthyophthirius multifiliis]
Length = 200
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G SC +++ +F ++ T G +F +++ +QN+ +K+ +WD G+ E + ++Y
Sbjct: 2 GKSCVLSQFIDKKFKEKHDVTIGVEFGARMINVQNKNIKIQIWDTAGQ--ECFRSITRSY 59
Query: 72 LSSA 75
SA
Sbjct: 60 YRSA 63
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici
IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici
IPO323]
Length = 207
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|307104270|gb|EFN52525.1| GTP binding protein [Chlorella variabilis]
Length = 211
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|255571107|ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 22 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 69
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDTAGQ 70
>gi|302769738|ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffii]
gi|302788640|ref|XP_002976089.1| rab family GTPase [Selaginella moellendorffii]
gi|300156365|gb|EFJ22994.1| rab family GTPase [Selaginella moellendorffii]
gi|300163932|gb|EFJ30542.1| rab family GTPase [Selaginella moellendorffii]
Length = 209
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 25 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 82
Query: 72 LSSANIS 78
+ ++++
Sbjct: 83 IRDSSVA 89
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C RY D F++ + T G DF +K + + ++ +KL +WD G+
Sbjct: 23 GKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQ 70
>gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
Length = 274
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGKANESSAGLVKT 70
G + TR+ D F +QY PT G DF K + ++ +R V+L LWD G+ E L+ +
Sbjct: 36 GKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQ--ERFHSLIPS 93
Query: 71 YLSSA 75
Y+ ++
Sbjct: 94 YIRNS 98
>gi|148225612|ref|NP_001089457.1| uncharacterized protein LOC734507 [Xenopus laevis]
gi|67678420|gb|AAH97569.1| MGC114765 protein [Xenopus laevis]
Length = 209
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 27 GKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 84
Query: 72 LSSAN 76
SAN
Sbjct: 85 YRSAN 89
>gi|449280941|gb|EMC88156.1| Ras-related protein Rab-7L1, partial [Columba livia]
Length = 169
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 10 TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
T G + RY D F R Y T G DF LK++ ++ V+L LWDI G+
Sbjct: 17 TVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLWDIAGQ 67
>gi|403337670|gb|EJY68057.1| Rab6 [Oxytricha trifallax]
gi|403366411|gb|EJY83007.1| Rab6 [Oxytricha trifallax]
Length = 235
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + R+TQD F Y T G DF K + + ++ V+L LWD G+ E L+ +Y
Sbjct: 25 GKTSLILRFTQDTFDGNYQATIGIDFLSKTMYVDDKMVRLQLWDTAGQ--ERFRSLIPSY 82
Query: 72 LSSANIS 78
+ ++++
Sbjct: 83 IKDSSVA 89
>gi|388519757|gb|AFK47940.1| unknown [Lotus japonicus]
Length = 191
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|388500442|gb|AFK38287.1| unknown [Lotus japonicus]
Length = 106
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|346976474|gb|EGY19926.1| GTP-binding protein SAS1 [Verticillium dahliae VdLs.17]
Length = 208
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|340386562|ref|XP_003391777.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + + +R V+L LWD G+ E LV Y
Sbjct: 21 GKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRMVRLQLWDTAGQ--ERFKALVPAY 78
Query: 72 LSSANIS 78
+ + I+
Sbjct: 79 IRDSAIA 85
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 990 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQ 1037
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQ 67
>gi|240281309|gb|EER44812.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 204
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 21 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 68
>gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 184
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANE 62
L + L G + RY + F+R+Y T G DF KL+ I +++ V+L LWDI G+ E
Sbjct: 5 LVVGDLGVGKTSLIQRYVHNIFSREYKTTIGVDFAYKLIPIAEDKVVRLQLWDIAGQ--E 62
Query: 63 SSAGLVKTYLSSA 75
+ + Y A
Sbjct: 63 RYGNMTRVYYREA 75
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium
castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 67
>gi|390343455|ref|XP_794320.3| PREDICTED: ras-related protein Rab-43-like [Strongylocentrotus
purpuratus]
Length = 220
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + + T G DF +K L I + VKL +WD G+ E + ++Y
Sbjct: 38 GKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLNIDGKKVKLQVWDTAGQ--ERFRTITQSY 95
Query: 72 LSSAN 76
SAN
Sbjct: 96 YRSAN 100
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D F + T G DF +K + +Q + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQIWDTAGQ 68
>gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 211
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 23 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 80
Query: 72 LSSANIS 78
+ ++++
Sbjct: 81 IRDSSVA 87
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|388498202|gb|AFK37167.1| unknown [Medicago truncatula]
Length = 206
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 19 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 66
>gi|327265909|ref|XP_003217750.1| PREDICTED: ras-related protein Rab-43-like [Anolis carolinensis]
Length = 221
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 39 GKTCLVQRFKTGAFAERQGNTIGVDFTMKSLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 96
Query: 72 LSSAN 76
SAN
Sbjct: 97 YRSAN 101
>gi|239918918|gb|ACS34806.1| RJL family GTPase [Bigelowiella natans]
Length = 185
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 4 LYIKVLT-----EGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
L IK+L+ G SC R+ + +F +Y PT G DF ++ + I ++ K+ WD+ G
Sbjct: 14 LRIKILSMGDAQTGKSCLIKRHCEHKFVSKYIPTIGVDFGVRPVKIDDKLAKVNFWDLSG 73
>gi|224067425|ref|XP_002302484.1| predicted protein [Populus trichocarpa]
gi|222844210|gb|EEE81757.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|167383306|ref|XP_001736482.1| rab6 [Entamoeba dispar SAW760]
gi|165901130|gb|EDR27285.1| rab6, putative [Entamoeba dispar SAW760]
Length = 186
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
++I + G +C R+T F Y T G DF +++ + N+ ++L +WD G+ E
Sbjct: 10 VFIGDCSVGKTCIIGRFTSKIFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTAGQ--ER 67
Query: 64 SAGLVKTYLSSANI 77
L+ Y+ A++
Sbjct: 68 YRSLIPNYIRGASV 81
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa Japonica Group]
gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa Japonica Group]
Length = 208
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 64 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 111
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQ 67
>gi|397776464|gb|AFO64930.1| Rab3 [Ruditapes philippinarum]
Length = 219
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDTAGQ 70
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|167998402|ref|XP_001751907.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697005|gb|EDQ83342.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 25 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 82
Query: 72 LSSANIS 78
+ ++++
Sbjct: 83 IRDSSVA 89
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|1845598|gb|AAB47925.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|328868471|gb|EGG16849.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 207
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
>gi|327286112|ref|XP_003227775.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 138
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 46 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQ 93
>gi|225710138|gb|ACO10915.1| Ras-related protein Rab-3 [Caligus rogercresseyi]
Length = 217
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 31 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 78
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 22 GKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 69
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|219879825|gb|ABW35313.2| Rab1A [Guillardia theta]
gi|428167960|gb|EKX36911.1| hypothetical protein GUITHDRAFT_97443 [Guillardia theta CCMP2712]
Length = 530
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + TR++ D F+ + T G DF + ++I+++ +KL +WD G+
Sbjct: 324 GKTSLLTRFSDDNFSNSFISTIGVDFRWRTMSIKDKNIKLQIWDTAGQ 371
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDTAGQ 70
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|449461547|ref|XP_004148503.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
gi|449528471|ref|XP_004171228.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
Length = 208
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|50582491|dbj|BAD32700.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 34 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 81
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 24 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 71
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 25 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|402082888|gb|EJT77906.1| Ras-like protein Rab-6A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 209
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 27 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 84
Query: 72 LSSANIS 78
+ ++++
Sbjct: 85 IRDSSVA 91
>gi|353232639|emb|CCD79994.1| putative rab 3 and [Schistosoma mansoni]
Length = 171
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 27 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQ 74
>gi|345560364|gb|EGX43489.1| hypothetical protein AOL_s00215g225 [Arthrobotrys oligospora ATCC
24927]
Length = 152
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 63 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 110
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|159906365|gb|ABX10871.1| RAB1A-like protein [Capra hircus]
Length = 161
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|145537818|ref|XP_001454620.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422386|emb|CAK87223.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+ D+F+ Y T G DF + L I + VKL +WD G+
Sbjct: 20 GKSSLLLRFADDQFSESYLTTIGVDFRFRTLPIDGKNVKLQIWDTAGQ 67
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 21 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 68
>gi|60602332|gb|AAX27623.1| unknown [Schistosoma japonicum]
Length = 170
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 27 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQ 74
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|356497064|ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 49 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 96
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|195163385|ref|XP_002022531.1| GL13084 [Drosophila persimilis]
gi|194104523|gb|EDW26566.1| GL13084 [Drosophila persimilis]
Length = 170
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D FT + T G DF +K + ++ + +KL +WD G+
Sbjct: 21 GKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|414886776|tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
Length = 249
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|403072074|pdb|4FMC|F Chain F, Espg-Rab1 Complex
Length = 117
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 10 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 57
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 24 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 71
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDTAGQ 70
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|326919368|ref|XP_003205953.1| PREDICTED: ras-related protein Rab-28-like [Meleagris gallopavo]
Length = 398
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 14 SCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQ-NRGVKLILWDIGGK 59
+ +TR+ Q+ F +QY T G DF+LK + + N V L +WD+GG+
Sbjct: 203 TSLATRFAQETFGKQYKQTIGLDFYLKRIILPGNLNVTLQVWDVGGQ 249
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 68 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQ 115
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|168066679|ref|XP_001785261.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162663131|gb|EDQ49913.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 29 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 86
Query: 72 LSSANIS 78
+ ++++
Sbjct: 87 IRDSSVA 93
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 75 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 122
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|56758476|gb|AAW27378.1| SJCHGC02999 protein [Schistosoma japonicum]
Length = 103
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S RY D F++ Y T G DF +K + I N VKL +WD G+ + TY
Sbjct: 43 GKSSLLFRYIDDGFSKTYMSTIGVDFKVKTVMIGNTRVKLQIWDTAGQERFRTITSTYTY 102
Query: 72 L 72
L
Sbjct: 103 L 103
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|118102410|ref|XP_417967.2| PREDICTED: ras-related protein Rab-7L1 [Gallus gallus]
Length = 205
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGK 59
L + T G + RY D F R Y T G DF LK++ ++ V+L LWDI G+
Sbjct: 11 LVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLWDIAGQ 67
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|145483363|ref|XP_001427704.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834296|emb|CAI44508.1| rab_C23 [Paramecium tetraurelia]
gi|124394787|emb|CAK60306.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C RY ++ FT + T G DF LK + + + VK+ +WD G+ E + +TY
Sbjct: 23 GKTCLLMRYCENLFTNNHLTTIGIDFKLKTIEVGGKKVKIQIWDTAGQ--ERFRTITQTY 80
Query: 72 LSSA 75
A
Sbjct: 81 YKGA 84
>gi|348515487|ref|XP_003445271.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Oreochromis
niloticus]
gi|410913473|ref|XP_003970213.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 211
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ + I+
Sbjct: 86 IRDSTIA 92
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus
ND90Pr]
Length = 206
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|307777866|dbj|BAJ21329.1| Rab-family small GTPase Rab5C [Tetrahymena thermophila]
Length = 194
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S R+ D+F TSG DF +K +T N+ + LWD G+ E L + Y
Sbjct: 17 GKSSILCRFIDDQFDENIQATSGADFKVKSITYNNKKIDFHLWDTAGQ--ERFRSLTQLY 74
Query: 72 LSSANIS 78
A+++
Sbjct: 75 YKDASVA 81
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 27 GKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKRIKLQIWDTAGQ 74
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 22 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 69
>gi|395335642|gb|AFN54651.1| Rab GTPase [Litopenaeus vannamei]
Length = 211
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 25 GKTSLITRFMYDSFDNTYQATIGIDFXSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 82
Query: 72 LSSANIS 78
+ + ++
Sbjct: 83 IRDSTVA 89
>gi|357482281|ref|XP_003611426.1| Ras-related protein Rab-6 [Medicago truncatula]
gi|355512761|gb|AES94384.1| Ras-related protein Rab-6 [Medicago truncatula]
Length = 226
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 75 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 122
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|432877571|ref|XP_004073165.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 211
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ + I+
Sbjct: 86 IRDSTIA 92
>gi|405965375|gb|EKC30753.1| WD repeat-containing protein 82 [Crassostrea gigas]
Length = 517
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 1 MAPLYIKVL-----TEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLT-IQNRGVKLILW 54
M + KV+ T G + F RY D + R Y T G DF LK++ +++ +KL LW
Sbjct: 306 MTEILFKVIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFALKVVKWSESQTIKLQLW 365
Query: 55 DIGGKANESSAGLVKTYLSSAN 76
DI G+ E + + Y A+
Sbjct: 366 DIAGQ--ERFTSMTRVYYKDAH 385
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 1 MAP---LYIKVLT-----EGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLI 52
MAP + K+L G SC R+ D +T + T G DF +K L + + +KL
Sbjct: 1 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQ 60
Query: 53 LWDIGGK 59
+WD G+
Sbjct: 61 IWDTAGQ 67
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|168014471|ref|XP_001759775.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688905|gb|EDQ75279.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 27 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 84
Query: 72 LSSANIS 78
+ ++++
Sbjct: 85 IRDSSVA 91
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 19 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 66
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 24 GKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 71
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|226507380|ref|NP_001147620.1| LOC100281229 [Zea mays]
gi|195612600|gb|ACG28130.1| ras-related protein Rab-6A [Zea mays]
gi|414865275|tpg|DAA43832.1| TPA: hypothetical protein ZEAMMB73_661349 [Zea mays]
Length = 213
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTAIITRFMYDKFDDTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 22 GKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 79
Query: 72 LSSANIS 78
+ ++++
Sbjct: 80 IRDSSVA 86
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|321453282|gb|EFX64533.1| hypothetical protein DAPPUDRAFT_304534 [Daphnia pulex]
Length = 219
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|430811069|emb|CCJ31440.1| unnamed protein product [Pneumocystis jirovecii]
gi|430812087|emb|CCJ30486.1| unnamed protein product [Pneumocystis jirovecii]
Length = 114
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + VKL +WD G+
Sbjct: 28 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELNGKTVKLQIWDTAGQ 75
>gi|410909794|ref|XP_003968375.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 212
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 4 LYIKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
L I L G + RY F+ Y T G DF LK+L V+L LWDI G+ E
Sbjct: 14 LVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQETVRLQLWDIAGQ--ER 71
Query: 64 SAGLVKTYLSSA 75
+ + Y A
Sbjct: 72 FGNMTRVYYREA 83
>gi|403419531|emb|CCM06231.1| predicted protein [Fibroporia radiculosa]
Length = 202
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 14 SCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
SC R+ D +T Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 SCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 65
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 29 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTAGQ 76
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 1 MAP---LYIKVLT-----EGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLI 52
MAP + K+L G SC R+ D +T + T G DF +K L + + +KL
Sbjct: 3 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 53 LWDIGGK 59
+WD G+
Sbjct: 63 IWDTAGQ 69
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 311 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 358
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|430811133|emb|CCJ31387.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 22 GKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIASY 79
Query: 72 LSSANIS 78
+ ++++
Sbjct: 80 IRDSSVA 86
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 70
>gi|357463333|ref|XP_003601948.1| Ras-related protein Rab-6A [Medicago truncatula]
gi|355490996|gb|AES72199.1| Ras-related protein Rab-6A [Medicago truncatula]
Length = 101
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R++ D F+ + T G DF +K + +Q + +KL +WD G+
Sbjct: 21 GKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQEKKIKLQIWDTAGQ 68
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|226498830|ref|NP_001142363.1| hypothetical protein [Zea mays]
gi|194708444|gb|ACF88306.1| unknown [Zea mays]
gi|414886777|tpg|DAA62791.1| TPA: hypothetical protein ZEAMMB73_332722 [Zea mays]
Length = 208
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|226501020|ref|NP_001150271.1| ras-related protein Rab-6A [Zea mays]
gi|242045718|ref|XP_002460730.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|194701460|gb|ACF84814.1| unknown [Zea mays]
gi|195637990|gb|ACG38463.1| ras-related protein Rab-6A [Zea mays]
gi|241924107|gb|EER97251.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|414590332|tpg|DAA40903.1| TPA: Ras protein Rab-6A [Zea mays]
Length = 208
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 78
Query: 72 LSSANIS 78
+ ++++
Sbjct: 79 IRDSSVA 85
>gi|38048295|gb|AAR10050.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 123
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 23 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|74005894|ref|XP_536104.2| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Canis lupus
familiaris]
Length = 203
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F + Y T G DF LK+L + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQ 67
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ +D+F + T G DF ++ + I + +KL +WD G+
Sbjct: 25 GKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRIKLQVWDTAGQ 72
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ ++ +T+ Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|325183060|emb|CCA17515.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 210
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTI-QNRGVKLILWDIGGKANESSAGLVKT 70
G + + R T+D F+ Y T G DF L+ LT+ +N V L +WDIGG++ +++
Sbjct: 27 GKTSIALRQTEDVFSNTYKQTIGLDFFLRRLTLSENTPVTLQIWDIGGQS--IGGKMLRN 84
Query: 71 YLSSANIS 78
Y++ A S
Sbjct: 85 YINGAQNS 92
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 25 GKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQ 72
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 45 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 92
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
>gi|110590290|pdb|2GIL|A Chain A, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590291|pdb|2GIL|B Chain B, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590292|pdb|2GIL|C Chain C, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590293|pdb|2GIL|D Chain D, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
Length = 162
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 13 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 70
Query: 72 LSSANIS 78
+ + ++
Sbjct: 71 IRDSTVA 77
>gi|304600|gb|AAC37386.1| Rab1B, partial [Dictyostelium discoideum]
gi|739975|prf||2004272B rab1B gene
Length = 199
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 14 GKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGE 61
>gi|184186083|ref|NP_001116967.1| rab3 GTPase [Strongylocentrotus purpuratus]
gi|60653473|gb|AAB67800.2| GTP-binding protein [Strongylocentrotus purpuratus]
Length = 219
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 34 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 81
>gi|328716995|ref|XP_001945306.2| PREDICTED: ras-related protein Rab-30-like [Acyrthosiphon pisum]
Length = 201
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+TQ F T G DF +K + I N VKL +WD G+ E + ++Y
Sbjct: 19 GKTCLVRRFTQGMFPPGQGATIGVDFMIKTIEIDNEKVKLQIWDTAGQ--ERFRSITQSY 76
Query: 72 LSSAN 76
SA+
Sbjct: 77 YRSAH 81
>gi|302782571|ref|XP_002973059.1| rab family GTPase [Selaginella moellendorffii]
gi|302805556|ref|XP_002984529.1| rab family GTPase [Selaginella moellendorffii]
gi|300147917|gb|EFJ14579.1| rab family GTPase [Selaginella moellendorffii]
gi|300159660|gb|EFJ26280.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G S R+T D F PT G DF LKL+T++ + +KL +WD G+
Sbjct: 30 GKSSLLLRFTADTFD-DLSPTIGVDFKLKLMTLEGKRLKLTIWDTAGQ 76
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|148666804|gb|EDK99220.1| RIKEN cDNA 1810048P08, isoform CRA_b [Mus musculus]
Length = 150
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 28 GKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 85
Query: 72 LSSAN 76
SAN
Sbjct: 86 YRSAN 90
>gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D+F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 22 GKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 79
Query: 72 LSSANIS 78
+ ++++
Sbjct: 80 IRDSSVA 86
>gi|443685362|gb|ELT88996.1| hypothetical protein CAPTEDRAFT_149846 [Capitella teleta]
Length = 218
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|397643767|gb|EJK76067.1| hypothetical protein THAOC_02193, partial [Thalassiosira oceanica]
Length = 352
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANE 62
G +C RY D F+ T G DF +K + + + +KL +WD G+A++
Sbjct: 164 GKTCLLLRYANDSFSPTVITTIGVDFKIKNVEVNGKRIKLQMWDTAGQASQ 214
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|395531196|ref|XP_003767668.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Sarcophilus
harrisii]
Length = 204
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQN-RGVKLILWDIGGK 59
G + RY+QD F++ Y T G DF LK++ + V+L LWDI G+
Sbjct: 19 GKTSLVQRYSQDSFSKHYKSTVGVDFALKVVQWSDSEMVRLQLWDIAGQ 67
>gi|354482851|ref|XP_003503609.1| PREDICTED: ras-related protein Rab-43-like [Cricetulus griseus]
Length = 203
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F+ + T G DF +K L IQ + VKL +WD G+ E + ++Y
Sbjct: 21 GKTCVVQRFKTGVFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ--ERFRTITQSY 78
Query: 72 LSSAN 76
SAN
Sbjct: 79 YRSAN 83
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKLQIWDTAGQ 69
>gi|326914674|ref|XP_003203649.1| PREDICTED: ras-related protein Rab-6A-like, partial [Meleagris
gallopavo]
Length = 271
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 6 IKVLTEGTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSA 65
+K+ G + TR+ D F Y T G DF K + +++R V+L LWD G+ E
Sbjct: 45 MKLFLVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFR 102
Query: 66 GLVKTYLSSANIS 78
L+ +Y+ + ++
Sbjct: 103 SLIPSYIRDSTVA 115
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
G S +R+T++EF + PT G +F K+++++ + VK+ +WD G
Sbjct: 20 GKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
>gi|268552453|ref|XP_002634209.1| C. briggsae CBR-RAB-19 protein [Caenorhabditis briggsae]
Length = 209
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+ F + T G DF +K L + + VKL +WD GG+ E + ++Y
Sbjct: 22 GKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNVDGKRVKLQIWDTGGQ--ERFRTITQSY 79
Query: 72 LSSAN 76
SAN
Sbjct: 80 YRSAN 84
>gi|356540581|ref|XP_003538766.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 208
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHL-KLLTIQNRGVKLILWDIGGKANESSAGLVKT 70
G + TR+ D+F Y T G DF L K L +++R V+L LWD G+ E L+ +
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFFLSKTLYVEDRTVRLQLWDTAGQ--ERFRSLIPS 78
Query: 71 YLSSANIS 78
Y+ ++++
Sbjct: 79 YIRDSSVA 86
>gi|347838050|emb|CCD52622.1| similar to ras-related protein Rab-6A [Botryotinia fuckeliana]
Length = 207
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 26 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 83
Query: 72 LSSANIS 78
+ ++++
Sbjct: 84 IRDSSVA 90
>gi|260821258|ref|XP_002605950.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
gi|229291287|gb|EEN61960.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
Length = 218
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G + F RY D FT + T G DF +K + Q++ VKL +WD G+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQ 80
>gi|195496108|ref|XP_002095553.1| GE22458 [Drosophila yakuba]
gi|194181654|gb|EDW95265.1| GE22458 [Drosophila yakuba]
Length = 95
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G +C R+++D F + T G DF ++ + + N+ +KL +WD G+
Sbjct: 20 GKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+++D FT + T G DF ++ + + + VKL +WD G+
Sbjct: 22 GKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 69
>gi|345571504|gb|EGX54318.1| hypothetical protein AOL_s00004g351 [Arthrobotrys oligospora ATCC
24927]
Length = 211
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ ++++
Sbjct: 86 IRDSSVA 92
>gi|322709933|gb|EFZ01508.1| RAS small monomeric GTPase Rab6 [Metarhizium anisopliae ARSEF 23]
Length = 234
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 47 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 104
Query: 72 LSSANIS 78
+ ++++
Sbjct: 105 IRDSSVA 111
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGG 58
G S +R+T++EF + PT G +F K+++++ + VK+ +WD G
Sbjct: 34 GKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 80
>gi|440801985|gb|ELR22925.1| RAB4, putative [Acanthamoeba castellanii str. Neff]
Length = 204
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANES 63
G SC R+ ++F R T G +F K++ IQ +KL +WD G+ S
Sbjct: 20 GKSCLLHRFIDNKFMRDSTHTIGVEFGSKIINIQGNNIKLQIWDTAGQVTRS 71
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D +T Y T G DF ++ + + + +KL +WD G+
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
>gi|400599769|gb|EJP67460.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 208
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 26 GKTALITRFMYDCFDNMYQATVGIDFFSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 83
Query: 72 LSSANIS 78
+ ++++
Sbjct: 84 IRDSSVA 90
>gi|384490321|gb|EIE81543.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 158
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R++ D FT + T G DF ++ + + + +KL +WD G+
Sbjct: 6 GKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 53
>gi|307167586|gb|EFN61130.1| Ras-related protein Rab-30 [Camponotus floridanus]
Length = 183
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G +C R+TQ F T G DF +K + ++N VKL +WD G+ E + ++Y
Sbjct: 19 GKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQ--ERFRSITQSY 76
Query: 72 LSSAN 76
SA+
Sbjct: 77 YRSAH 81
>gi|156049367|ref|XP_001590650.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980]
gi|154692789|gb|EDN92527.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 186
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 5 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 62
Query: 72 LSSANIS 78
+ ++++
Sbjct: 63 IRDSSVA 69
>gi|449673442|ref|XP_004207959.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Hydra magnipapillata]
Length = 213
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G S F R+ ++F + T G DF +K L I N + L LWD G+ E L K Y
Sbjct: 24 GKSSFIYRFCHNDFRPNFSATIGVDFQVKTLEICNNWIALQLWDTAGQ--ERFQSLTKQY 81
Query: 72 LSSAN 76
A+
Sbjct: 82 FRRAD 86
>gi|432877569|ref|XP_004073164.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 211
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ + I+
Sbjct: 86 IRDSTIA 92
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGK 59
G SC R+ D + Y T G DF ++ + ++ + VKL +WD G+
Sbjct: 20 GKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDTAGQ 67
>gi|367032973|ref|XP_003665769.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila
ATCC 42464]
gi|347013041|gb|AEO60524.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila
ATCC 42464]
Length = 210
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 GTSCFSTRYTQDEFTRQYYPTSGPDFHLKLLTIQNRGVKLILWDIGGKANESSAGLVKTY 71
G + TR+ D F Y T G DF K + +++R V+L LWD G+ E L+ +Y
Sbjct: 28 GKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ--ERFRSLIPSY 85
Query: 72 LSSANIS 78
+ ++++
Sbjct: 86 IRDSSVA 92
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,201,821,392
Number of Sequences: 23463169
Number of extensions: 40484554
Number of successful extensions: 84247
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4271
Number of HSP's successfully gapped in prelim test: 735
Number of HSP's that attempted gapping in prelim test: 79820
Number of HSP's gapped (non-prelim): 5036
length of query: 78
length of database: 8,064,228,071
effective HSP length: 49
effective length of query: 29
effective length of database: 6,914,532,790
effective search space: 200521450910
effective search space used: 200521450910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)