RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy26
(1186 letters)
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 73.5 bits (179), Expect = 3e-16
Identities = 20/107 (18%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 610 DNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSSNPDDQFKIVETNG 669
+ AP F + + E+ + G++I A+D D ++ Y + ++P + + NG
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 670 VIYLNKPI----QSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQDV 712
++ N + + +T T+ ++ +D G + ++ +++ DV
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 73.1 bits (178), Expect = 5e-16
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 927 DNSPQFLRTPYKVQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDEHFSIDEAT 986
+ +P F+ +V +SE S G ++ + D D+ I + ++++
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQ-KLSYFIGNDPARWLTVNKDN 59
Query: 987 GQITISKLLDRETV----SKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
G +T + LDRE+ + + + +L D + + T + + VLD
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDG---VSVGTGTGTLILHVLD 106
Score = 71.9 bits (175), Expect = 9e-16
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 1035 DNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGVNNEVLFSIGSGNKRDTFHMDPVT 1094
+ AP FV S++ V E+ + ++ A D D ++ + ++
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKL-SYFIGNDPARWLTVNKDN 59
Query: 1095 GILYLHKKLDYE----EINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
GI+ + LD E + N+Y + + +D G + ++V D
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Score = 69.6 bits (169), Expect = 7e-15
Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 818 DNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSF-ALSNAKGDFEIDSRNG 876
+ P F + V E+L + L+A D D + +LS+ ++ ++ NG
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 877 FIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITD 924
+ + DRE+ + + T D+G + +++ D
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVT--DDGVSVGTGTGTLILHVLD 106
Score = 69.2 bits (168), Expect = 1e-14
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 714 DHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLGNNGFVSYSIIEGNGEDKFGIFPDG 773
+ P F + + E + LVA+D D +SY I +G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 774 FMYVRNSLDRET----RDYYALTVLAEDHGKYPRSSSVPVVIHIID 815
+ +LDRE+ + Y + +L D G + + +++H++D
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Score = 61.9 bits (149), Expect = 4e-12
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 24/107 (22%)
Query: 345 DEKPQFTQNVLNISLLENSAANTLVATLTASDHDQD--------------------SITG 384
+E P F V + + E+ + + +L A D D+ G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 385 QLTVKTKLDRETITD----YELKVIAKDHGTPPQSSTATVFLFIEDV 427
+T LDRE+ Y + ++ D G + T T+ L + DV
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 55.4 bits (132), Expect = 7e-10
Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 79 DNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAKITYYLSETERKFTNCQQQ 138
+ P F +V V ++E + G K++ ++A D D+ K++Y++ ++ +
Sbjct: 1 NEAPFFVPAV--SRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKD 58
Query: 139 RP------------GGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
+ + D G G + +++LD
Sbjct: 59 NGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Score = 50.8 bits (120), Expect = 3e-08
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 21/107 (19%)
Query: 256 DHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTGVNAQIFYAFVSGNEHQWFEINPTS 315
+ P F + +SE G + + A D D F+ + +W +N +
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQ-KLSYFIGNDPARWLTVNKDN 59
Query: 316 GLITTKT--------------------RDGGPNPKWAYTQLKVSILD 342
G++T D G + L + +LD
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Score = 45.4 bits (106), Expect = 2e-06
Identities = 24/112 (21%), Positives = 34/112 (30%), Gaps = 39/112 (34%)
Query: 177 DHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEGLN----------------- 219
+ P F V E+ G + ++ DPD+
Sbjct: 1 NEAPF-----FVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTV 55
Query: 220 -------------DRE----HINKYNLTIIATDKGNPPRTATAFLIIHVNDV 254
DRE N Y + ++ TD G T T LI+HV DV
Sbjct: 56 NKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 41.1 bits (95), Expect = 6e-05
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 429 DNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGKNAQVTYSIESGSE 478
+ P F P+ + ED G I+ + A D D + +++Y I +
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPA 50
Score = 38.8 bits (89), Expect = 5e-04
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 35 YLQTTGKLDRETV----DFYQLNISARDGGTPTRYGYLQVNVTILDV 77
+ G LDRE+ + Y + + D G G + + +LDV
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 33.0 bits (74), Expect = 0.050
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 513 TFSILEDHDKMQENLGRDVGKIKIRNSDMQATIDQIKYAIVYGDPKKKFEINDRTGEIIT 572
F + E+L R I + D Q + DP + +N G +
Sbjct: 5 FFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTG 64
Query: 573 AAKLDRE----EQSIYNLVVSARSRLS---YGKTFVNITLLD 607
LDRE + + Y +++ G + + +LD
Sbjct: 65 NGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Score = 28.0 bits (61), Expect = 2.9
Identities = 3/24 (12%), Positives = 7/24 (29%)
Query: 1140 DNPPSFPNTAIVRQIRENIPINTI 1163
+ P F + E++
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEK 24
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 71.6 bits (174), Expect = 2e-15
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%)
Query: 1033 ENDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIG-------VNNEVLFSIGSGNKR 1085
+NDN P F + + SV E TQ+ ATD D ++ +L
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 1086 DTFHMDP-VTGILYLHKKLDYEEINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
+ F ++ I + LD E+ Y L V A+D LS I + D
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 65.8 bits (159), Expect = 2e-13
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 925 QNDNSPQFLRTPYKVQISEGASIGTQVFR---VSTMDADEGLNGDVYYKIISGNDD---- 977
QNDN P+F + ++ + EG GTQV D + LNG + Y I+ + +
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 978 EHFSIDEATGQITISKL-LDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
F+I+ TG I++ LDRE ++ L V A D LS I + D
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLE---GAGLSVEGKAIIQITD 113
Score = 65.1 bits (157), Expect = 3e-13
Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 713 NDHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLGNNG---FVSYSIIEGNGEDKFG- 768
ND+ P F + S+ E + + A D D + +SYSI++ + E+
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 769 -----IFPDGFMYVRNSLDRETRDYYALTVLAEDHGKYPRSSSVPVVIHIID 815
+ LDRE Y LTV A D S +I I D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 58.5 bits (140), Expect = 6e-11
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 29/113 (25%)
Query: 343 ENDEKPQFTQNVLNISLLENSAANTLVATLTASDHDQDSITGQLTVKTKL---------- 392
+ND +P+FTQ+V S+ E T V ++A+D D + + + +
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 393 -------------------DRETITDYELKVIAKDHGTPPQSSTATVFLFIED 426
DRE +Y L V A D S + I D
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 57.4 bits (137), Expect = 1e-10
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 816 ENDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAEL---------SFALSNAK 866
+NDN+P+F+ F SV E + P + V + ATD+D ++
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 867 GDFEIDSRNGFIKTMRS-FDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITD 924
F I+ G I + + DRE +L +D L + K + ITD
Sbjct: 61 NLFTINRETGVISLIGTGLDREK------FPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 54.3 bits (129), Expect = 2e-09
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 609 NDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGV---NSRIFYSLSSNPDDQ---- 661
NDN P F +D ++ E G ++ A D D + N + YS+ ++
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 662 -FKIVETNGVIYLNKPIQS-PPGSTLTIEIVASDSGKQSLSSKHSVNVYIQD 711
F I GVI L T+ + A+D LS + + I D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 51.6 bits (122), Expect = 2e-08
Identities = 23/114 (20%), Positives = 32/114 (28%), Gaps = 19/114 (16%)
Query: 78 NDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATD-----------------NDQGDNAK 120
NDN P F V + S+ E V PGT+V+ V ATD +
Sbjct: 2 NDNRPKFTQDV--FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPI 59
Query: 121 ITYYLSETERKFTNCQQQRPGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
+ E + TV A D + + D
Sbjct: 60 PNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 45.0 bits (105), Expect = 3e-06
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 219 NDREHINKYNLTIIATDKGNPPRTATAFLIIHVND 253
DRE +Y LT+ ATD + II + D
Sbjct: 79 LDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 44.3 bits (103), Expect = 7e-06
Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 24/112 (21%)
Query: 255 NDHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTG-------VNAQIFYAFVSGNEHQ 307
ND+ P F + + + E G+ V ++ATDED ++ I
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 308 WFEINPTSGLITTKT-----------------RDGGPNPKWAYTQLKVSILD 342
F IN +G+I+ D + + I D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 39.7 bits (91), Expect = 3e-04
Identities = 10/44 (22%), Positives = 14/44 (31%)
Query: 33 YLYLQTTGKLDRETVDFYQLNISARDGGTPTRYGYLQVNVTILD 76
+ LDRE Y L + A D + + I D
Sbjct: 70 GVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 38.9 bits (89), Expect = 4e-04
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 428 NDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGK---NAQVTYSIESGSEAVDGGN 484
NDN P F + + E Q G ++ VSA D D N ++YSI N
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 485 RKATENAIVEIIKNSMVETLEFEHYNGYTFSI 516
I + E + YT ++
Sbjct: 62 LFTINRETGVISLIGTGL--DREKFPEYTLTV 91
Score = 31.2 bits (69), Expect = 0.20
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 1139 NDNPPSFPNTAIVRQIRENIPINT 1162
NDN P F +RE + T
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGT 25
Score = 28.1 bits (61), Expect = 2.6
Identities = 19/101 (18%), Positives = 29/101 (28%), Gaps = 5/101 (4%)
Query: 512 YTFSILEDHDKMQENLGRDVGKIKIRNSDMQATIDQ-IKYAIVYGDPKKKFEINDRTGEI 570
+ S+ E + + + + I F IN TG I
Sbjct: 13 FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVI 72
Query: 571 -ITAAKLDREEQSIYNLVVSARSRLS---YGKTFVNITLLD 607
+ LDRE+ Y L V A + I + D
Sbjct: 73 SLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 114
Score = 70.9 bits (172), Expect = 3e-15
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 926 NDNSPQFLRTPYKVQISEGASIGTQVFRVSTMDADEG--LNGDVYYKIISGND----DEH 979
NDN P+FL + + EG+ GT V V+ +DAD+ LNG + Y+I+S
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 980 FSIDEATGQI-TISKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
F+I+ TG I T++ LDRE V ++ L + A D + LS+T I V D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 60.9 bits (146), Expect = 9e-12
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 10/114 (8%)
Query: 1034 NDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGVN------NEVLFSIGSGNKRDT 1087
NDN P F+ SV E + T + A D+D ++ S +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 1088 FHMDPVTGILYLHKKL-DYEEINSYVLNVTASDGGTP---RLSTIFMFTINVED 1137
F ++ TG + D E++ Y L + A+D LS I V D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 57.0 bits (136), Expect = 2e-10
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 713 NDHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLGN--NGFVSYSIIEGN----GEDK 766
ND+ P F + S+ E + + A D+D N NG + Y I+ +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 767 FGIFPDGFMYV--RNSLDRETRDYYALTVLAEDHGKYPR---SSSVPVVIHIID 815
F I + + LDRE Y L + A D P S++ VI + D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 54.3 bits (129), Expect = 2e-09
Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 11/114 (9%)
Query: 609 NDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGVNSR-------IFYSLSSNPDDQ 661
NDN P F ++PE + G + A D D + + S+ +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 662 FKIVETNGVIYL-NKPIQSPPGSTLTIEIVASDSG---KQSLSSKHSVNVYIQD 711
F I G I + T+ I A+D LS+ + + + D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 52.0 bits (123), Expect = 1e-08
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 16/119 (13%)
Query: 817 NDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSF--------ALSNAKGD 868
NDN+PEF + + SV E P ++V + A D D + +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 869 FEIDSRNGFIKTMRSFDRENLLQTTGQNFISLEATVSDNGSP---RLKDKVKVDVYITD 924
F I++ G I T+ + +L +D L + + +TD
Sbjct: 61 FTINNETGDIITVAAGLDREK-----VQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 51.3 bits (121), Expect = 3e-08
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 31/114 (27%)
Query: 344 NDEKPQFTQNVLNISLLENSAANTLVATLTASDHDQDSITGQL----------------- 386
ND +P+F V N S+ E S T V T+TA D D + +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 387 -----------TVKTKLDRETITDYELKVIAKDHGTPPQ---SSTATVFLFIED 426
TV LDRE + Y L + A D P S+TAT + + D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 46.6 bits (109), Expect = 1e-06
Identities = 22/116 (18%), Positives = 33/116 (28%), Gaps = 18/116 (15%)
Query: 78 NDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAK----------------I 121
NDN P F H V ++ S+ E PGT V+ V A D D +
Sbjct: 1 NDNRPEFLHQV--WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSP 58
Query: 122 TYYLSETERKFTNCQQQRPGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLDAND 177
+ E + + A D G + ++ D
Sbjct: 59 NMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 45.5 bits (106), Expect = 3e-06
Identities = 25/111 (22%), Positives = 36/111 (32%), Gaps = 7/111 (6%)
Query: 255 NDHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTGVNA------QIFYAFVSGNEHQW 308
ND+ P F ++ + E + G+YV +TA D D +I S
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 309 FEINPTSGLITTKTRDGGPNPKWAYTQLKVSILDENDEKPQFTQNVLNISL 359
F IN +G I T YT L + D N +
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYT-LIIQATDMEGNPTYGLSNTATAVI 110
Score = 40.9 bits (94), Expect = 1e-04
Identities = 19/89 (21%), Positives = 31/89 (34%)
Query: 428 NDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGKNAQVTYSIESGSEAVDGGNRKA 487
NDN P F + +PE ++ G ++ V+A D D S+A +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 488 TENAIVEIIKNSMVETLEFEHYNGYTFSI 516
++ L+ E YT I
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLII 89
Score = 38.9 bits (89), Expect = 5e-04
Identities = 26/119 (21%), Positives = 37/119 (31%), Gaps = 46/119 (38%)
Query: 176 NDHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEG------------------ 217
ND+ P F +V E + G+ V V+ +D D+
Sbjct: 1 NDNRPE-----FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPST 55
Query: 218 --------------------LNDREHINKYNLTIIATDKGNPPR---TATAFLIIHVND 253
DRE + +Y L I ATD P + TA +I V D
Sbjct: 56 PSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 31.2 bits (69), Expect = 0.20
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 1139 NDNPPSFPNTAIVRQIRENIPINTI 1163
NDN P F + + E T
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTY 25
Score = 30.5 bits (67), Expect = 0.38
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 44 RETVDFYQLNISARDGGTPTRYGYLQVNVTILDVND 79
RE V Y L I A D YG ++ V D
Sbjct: 79 REKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 69.6 bits (169), Expect = 8e-15
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 926 NDNSPQFLRTPYKVQISEGASIGTQVFRVSTMDA-DEGLNGDVYYKIISGNDDEHFSIDE 984
NDN+P F Y + E IG +V R+S D G I N+ F+I
Sbjct: 2 NDNAPIFDPKTYTALVPENE-IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 985 ATG----QITISKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
+T +K LD E ++ L++ +A +ST VT+ V D
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 57.7 bits (138), Expect = 1e-10
Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 713 NDHTPVFDMSSYETSLLESTPVNNRFFELVAKDS-DLGNNGFVSYSIIEGNGEDKFGIFP 771
ND+ P+FD +Y + E+ L D G + + I N F I
Sbjct: 2 NDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 772 D-----GFMYVRNSLDRETRDYYALTVLAED---HGKYPRSSSVPVVIHIID 815
D G + LD E R Y L + E+ +S+ V + + D
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 56.9 bits (136), Expect = 2e-10
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 9/112 (8%)
Query: 1034 NDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGVNNEVLFSIGSGNKRD---TFHM 1090
NDNAP+F V EN + ++ TD D+
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 1091 DPVTGILYLHKK--LDYEEINSYVLNVTASDG---GTPRLSTIFMFTINVED 1137
DP + L LD+E YVL +T + P ++ T+ VED
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 54.2 bits (129), Expect = 2e-09
Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 30/113 (26%)
Query: 344 NDEKPQFTQNVLNISLLENSAANTLVATLTASD--------------------------H 377
ND P F + EN V L+ +D
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 378 DQDSITGQLTVKTKLDRETITDYELKVIAKD---HGTPPQSSTATVFLFIEDV 427
D +S G LT LD E Y L++ ++ P +STATV + +EDV
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 51.5 bits (122), Expect = 2e-08
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 609 NDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGVN--SRIFYSLSSNPDDQFKIVE 666
NDNAPIF+ +PEN +G E+ D D + Y + N F I
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 667 ----TNGVIYLNKPIQSPPGSTLTIEIVASDS---GKQSLSSKHSVNVYIQDV 712
G++ K + ++I ++ +S +V V ++DV
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 50.8 bits (120), Expect = 3e-08
Identities = 21/114 (18%), Positives = 30/114 (26%), Gaps = 20/114 (17%)
Query: 78 NDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAKITYY---LSETERKFTN 134
NDN PIF Y+ + E+ G +V ++ TD D F
Sbjct: 2 NDNAPIFDPKT--YTALVPENE-IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNI 58
Query: 135 CQQQRPGGSC-----------PKSCVFTVFARD---HGSPRQDGRTYVTVNLLD 174
K V + + P VTV + D
Sbjct: 59 TTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 48.8 bits (115), Expect = 2e-07
Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 817 NDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAEL---SFALSNAKGDFEIDS 873
NDN P F ++ V EN V +L TD D+ N G F I +
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 874 RNGFIKTMRSFDRENLLQTTGQNFISLEAT-VSDNGSPRLKDKVKVDVYITD 924
+ + + + + Q + + P V V + D
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 45.8 bits (107), Expect = 2e-06
Identities = 27/119 (22%), Positives = 35/119 (29%), Gaps = 45/119 (37%)
Query: 175 ANDHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEGLND-------------- 220
AND+ P+ F A V EN I G V +SV D D
Sbjct: 1 ANDNAPI-----FDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGG 54
Query: 221 ----------------------REHINKYNLTIIATDK---GNPPRTATAFLIIHVNDV 254
E +Y L I + P T+TA + + V DV
Sbjct: 55 FFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 38.4 bits (88), Expect = 7e-04
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 428 NDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGKNAQVTYS 472
NDN P+F P Y +PE+ ++G + ++S DLD
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAV 45
Score = 34.2 bits (77), Expect = 0.022
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 31 TSYLYLQTTGKLDRETVDFYQLNISARDG---GTPTRYGYLQVNVTILDV 77
++ L T LD E Y L I+ + P V VT+ DV
Sbjct: 64 SNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 28.8 bits (63), Expect = 1.6
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 16/106 (15%)
Query: 512 YTFSILEDHDKMQENLGRDVGKIKIRNSDMQATIDQIKYAIVYGDPKKKFEIN----DRT 567
YT + E+ +G +V ++ + + DM T + + F I
Sbjct: 13 YTALVPEN------EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQ 66
Query: 568 GEIITAAKLDREEQSIYNLVVSARSRLSYGK------TFVNITLLD 607
G + TA LD E + Y L ++ + + V +T+ D
Sbjct: 67 GILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 28.0 bits (61), Expect = 2.6
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 1139 NDNPPSFPNTAIVRQIRENIPINTI 1163
NDN P F + EN +
Sbjct: 2 NDNAPIFDPKTYTALVPENEIGFEV 26
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 112
Score = 66.3 bits (160), Expect = 1e-13
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 926 NDNSPQFLRTPYKVQISEGASIGTQVFRVSTMDADEGL---NGDVYYKIISGNDDEH--- 979
NDN P+F + ++ ++EGA GT V +VS DAD+ + N + Y I+S + +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 980 -FSIDEATGQITI-SKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
F+++ TG I++ + LDRE+ + L V A D LS+T I V D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQ---GEGLSTTAKAVITVKD 112
Score = 63.2 bits (152), Expect = 1e-12
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1034 NDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGV---NNEVLFSIGSGN----KRD 1086
NDN P F + + SV E T + ATD+D V N + ++I S + ++
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 1087 TFHMDPVTGILYLHKKL-DYEEINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
F ++ TG++ + D E +Y L V A+D LST I V+D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 62.1 bits (149), Expect = 3e-12
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 713 NDHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLG---NNGFVSYSIIEGNGEDKFGI 769
ND+ P F +E S+ E ++ A D+D N ++Y+I+ + E
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 770 FPDGFMYVRNSL------DRETRDYYALTVLAEDHGKYPRSSSVPVVIHIID 815
DRE+ Y L V A D S++ VI + D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 59.0 bits (141), Expect = 4e-11
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 609 NDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGV---NSRIFYSLSSNPDD----- 660
NDN P F ++ E ++ E A G + A D D V N+ I Y++ S +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 661 QFKIVETNGVIYL-NKPIQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQD 711
F + GVI + + T T+ + A+D + LS+ + ++D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 56.7 bits (135), Expect = 3e-10
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)
Query: 817 NDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVG---RNAELSFALSNAKGD----- 868
NDN+PEF+ F SV E P + V K+ ATD D NA +++ + + +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 869 -FEIDSRNGFIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITD 924
F ++ G I + S +L +D L K + + D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRES-----YPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 54.7 bits (130), Expect = 1e-09
Identities = 25/114 (21%), Positives = 37/114 (32%), Gaps = 19/114 (16%)
Query: 78 NDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGD---NAKITYYLSETERKFTN 134
NDN P F V + S+ E +PGT V++V ATD D NA I Y + + + +
Sbjct: 1 NDNRPEFTQEV--FEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPH 58
Query: 135 CQQQRPGGSCP--------------KSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
+ V A D + + D
Sbjct: 59 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 50.9 bits (120), Expect = 3e-08
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 24/112 (21%)
Query: 255 NDHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTGV---NAQIFYAFVSGNEHQW--- 308
ND+ P F + + ++E A G+ V ++ATD D V NA I Y VS +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 309 -FEINPTSGLITTKT-----------------RDGGPNPKWAYTQLKVSILD 342
F +N +G+I+ T D + +++ D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 49.3 bits (116), Expect = 1e-07
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 29/112 (25%)
Query: 344 NDEKPQFTQNVLNISLLENSAANTLVATLTASDHDQDS---------------------- 381
ND +P+FTQ V S+ E + T V ++A+D D D
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 382 -------ITGQLTVKTKLDRETITDYELKVIAKDHGTPPQSSTATVFLFIED 426
+ + LDRE+ Y L V A D S+TA + ++D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 41.6 bits (96), Expect = 6e-05
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 428 NDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCG---KNAQVTYSIESGSE 478
NDN P F + + E G S+++VSA D D NA + Y+I S
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDP 54
Score = 40.5 bits (93), Expect = 1e-04
Identities = 25/117 (21%), Positives = 34/117 (29%), Gaps = 44/117 (37%)
Query: 176 NDHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEGLND--------------- 220
ND+ P F +V E A+ G+ V VS D D+ +N
Sbjct: 1 NDNRPE-----FTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPE 55
Query: 221 ------------------------REHINKYNLTIIATDKGNPPRTATAFLIIHVND 253
RE Y L + A D + TA +I V D
Sbjct: 56 LPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 33.9 bits (76), Expect = 0.021
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 44 RETVDFYQLNISARDGGTPTRYGYLQVNVTILD 76
RE+ Y L + A D + +T+ D
Sbjct: 80 RESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 30.9 bits (68), Expect = 0.25
Identities = 7/24 (29%), Positives = 8/24 (33%)
Query: 1139 NDNPPSFPNTAIVRQIRENIPINT 1162
NDN P F + E T
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGT 24
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 64.4 bits (156), Expect = 5e-13
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Query: 930 PQFLRTPYKVQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDE----HFSIDEA 985
P + E G + + +++ G V+Y I D F I+
Sbjct: 1 PLGSWVIPPISCPEN-EKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 986 TGQITISKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLDE 1033
TG + +++ LDRE ++ + L A + N + + I V D+
Sbjct: 60 TGWLKVTEPLDRERIATYTLFSHAVSSN---GNAVEDPMEILITVTDQ 104
Score = 62.4 bits (151), Expect = 2e-12
Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 1047 ISVYENTTVNTQLFHFQATDSDIGVNNEVLFSI----GSGNKRDTFHMDPVTGILYLHKK 1102
IS EN + S+ +V +SI F ++ TG L + +
Sbjct: 10 ISCPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP 68
Query: 1103 LDYEEINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
LD E I +Y L A + I V D
Sbjct: 69 LDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 62.1 bits (150), Expect = 3e-12
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Query: 622 ITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSS-----NPDDQFKIVETNGVIYLNKP 676
I+ PEN + + ++FYS++ P F I G + + +P
Sbjct: 10 ISCPENEKGPFPKNLV-QIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP 68
Query: 677 IQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQD 711
+ +T T+ A S ++ + + + D
Sbjct: 69 LDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 59.7 bits (144), Expect = 2e-11
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 821 PEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSFALS------NAKGDFEIDSR 874
P S S EN F L+ + + ++ ++++ G F I+
Sbjct: 1 PLGSWVIPPISCPENEKG-PFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 875 NGFIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITDQ 925
G++K DRE +L + + ++D +++ + +TDQ
Sbjct: 60 TGWLKVTEPLDRER------IATYTLFSHAVSSNGNAVEDPMEILITVTDQ 104
Score = 58.2 bits (140), Expect = 6e-11
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 741 LVAKDSDLGNNGFVSYSI----IEGNGEDKFGIFPD-GFMYVRNSLDRETRDYYALTVLA 795
LV S+ G V YSI + F I + G++ V LDRE Y L A
Sbjct: 24 LVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHA 83
Query: 796 EDHGKYPRSSSVPVVIHIIDE 816
+ ++I + D+
Sbjct: 84 VSSNGNAVEDPMEILITVTDQ 104
Score = 51.3 bits (122), Expect = 2e-08
Identities = 10/106 (9%), Positives = 27/106 (25%), Gaps = 16/106 (15%)
Query: 82 PIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAKITYYLSET------ERKFT-- 133
P+ + + S NE G ++ +++ K+ Y ++ F
Sbjct: 1 PLGSWVIPPISCPENE---KGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIE 57
Query: 134 -----NCQQQRPGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
+ + A + + + + D
Sbjct: 58 RETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 45.9 bits (108), Expect = 1e-06
Identities = 8/87 (9%), Positives = 23/87 (26%), Gaps = 20/87 (22%)
Query: 277 GSYVAGITATDEDTGVNAQIFYAFVS----GNEHQWFEINPTSGLI-------------- 318
G + + + ++FY+ F I +G +
Sbjct: 18 GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATY 77
Query: 319 --TTKTRDGGPNPKWAYTQLKVSILDE 343
+ N ++ +++ D+
Sbjct: 78 TLFSHAVSSNGNAVEDPMEILITVTDQ 104
Score = 40.9 bits (95), Expect = 8e-05
Identities = 19/104 (18%), Positives = 27/104 (25%), Gaps = 26/104 (25%)
Query: 348 PQFTQNVLNISLLENSAANTLVATLTASDHDQ-------------------------DSI 382
P + + IS EN L ++ +
Sbjct: 1 PLGSWVIPPISCPENEKG-PFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 383 TGQLTVKTKLDRETITDYELKVIAKDHGTPPQSSTATVFLFIED 426
TG L V LDRE I Y L A + + + D
Sbjct: 60 TGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 37.0 bits (85), Expect = 0.002
Identities = 13/94 (13%), Positives = 20/94 (21%), Gaps = 36/94 (38%)
Query: 195 TVDENAINGSVVAAVSVVDPDEGLN----------------------------------- 219
+ EN G + + ++
Sbjct: 11 SCPENE-KGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPL 69
Query: 220 DREHINKYNLTIIATDKGNPPRTATAFLIIHVND 253
DRE I Y L A ++I V D
Sbjct: 70 DRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 32.8 bits (74), Expect = 0.052
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 443 IPEDTQVGVSIVQVSAYDLDCGKNAQVTYSIESG 476
PE+ + G + + K +V YSI
Sbjct: 12 CPEN-EKGPFPKNLVQIKSNKDKEGKVFYSITGQ 44
Score = 31.2 bits (70), Expect = 0.20
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 44 RETVDFYQLNISARDGGTPTRYGYLQVNVTILD 76
RE + Y L A +++ +T+ D
Sbjct: 71 RERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 30.5 bits (68), Expect = 0.37
Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 547 QIKYAIVY----GDPKKKFEINDRTGEIITAAKLDREEQSIYNLVVSAR---SRLSYGKT 599
++ Y+I P F I TG + LDRE + Y L A
Sbjct: 36 KVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPM 95
Query: 600 FVNITLLD 607
+ IT+ D
Sbjct: 96 EILITVTD 103
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 63.3 bits (153), Expect = 8e-13
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 1047 ISVYENTTVNTQLFHFQATDSDIGVNNEVLFSI----GSGNKRDTFHMDPVTGILYLHKK 1102
I++ EN+ S N + +S+ F ++P++G L + K
Sbjct: 9 INLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 1103 LDYEEINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
LD E I + L A D ++ INV D
Sbjct: 68 LDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 56.8 bits (136), Expect = 2e-10
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 939 VQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDE----HFSIDEATGQITISKL 994
+ + E S G + + + N + Y + D+ F I+ +GQ++++K
Sbjct: 9 INLPEN-SRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 995 LDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
LDRE +++F+L+ A D NQ+ + + I+V+D
Sbjct: 68 LDRELIARFHLRAHAVDIN---GNQVENPIDIVINVID 102
Score = 54.1 bits (129), Expect = 2e-09
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Query: 622 ITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSS-----NPDDQFKIVETNGVIYLNKP 676
I +PEN+ + N + YS++ P F I +G + + KP
Sbjct: 9 INLPENSRGPFPQELV-RIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 677 IQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQD 711
+ + + A D + + + + + D
Sbjct: 68 LDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 52.2 bits (124), Expect = 7e-09
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 741 LVAKDSDLGNNGFVSYSIIEGNGE-DKFGIFP----DGFMYVRNSLDRETRDYYALTVLA 795
LV S N + YS+ + GIF G + V LDRE + L A
Sbjct: 23 LVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82
Query: 796 EDHGKYPRSSSVPVVIHIID 815
D + + +VI++ID
Sbjct: 83 VDINGNQVENPIDIVINVID 102
Score = 51.8 bits (123), Expect = 1e-08
Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 13/101 (12%)
Query: 830 FSVMENLPPDSFVGKLIATDKDVGRNAELSFALS------NAKGDFEIDSRNGFIKTMRS 883
++ EN F +L+ +N L ++++ G F I+ +G + +
Sbjct: 9 INLPENSRG-PFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 884 FDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITD 924
DRE L A D ++++ + + + + D
Sbjct: 68 LDREL------IARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 49.5 bits (117), Expect = 7e-08
Identities = 10/95 (10%), Positives = 28/95 (29%), Gaps = 14/95 (14%)
Query: 93 VSLNESVLPGTKVLQVIATDNDQGDNAKITYYLS------ETERKFTN-------CQQQR 139
++L E+ G +++ + + N + Y ++ F +
Sbjct: 9 INLPENS-RGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 140 PGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
A D + + + +N++D
Sbjct: 68 LDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 41.7 bits (97), Expect = 4e-05
Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 20/86 (23%)
Query: 277 GSYVAGITATDEDTGVNAQIFYAFVS----GNEHQWFEINPTSGL--------------- 317
G + + N + Y+ F INP SG
Sbjct: 17 GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARF 76
Query: 318 -ITTKTRDGGPNPKWAYTQLKVSILD 342
+ D N + ++++D
Sbjct: 77 HLRAHAVDINGNQVENPIDIVINVID 102
Score = 41.7 bits (97), Expect = 4e-05
Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 26/95 (27%)
Query: 357 ISLLENSAANTLVATLTASDHD-------------------------QDSITGQLTVKTK 391
I+L ENS L + I+GQL+V
Sbjct: 9 INLPENSRG-PFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 392 LDRETITDYELKVIAKDHGTPPQSSTATVFLFIED 426
LDRE I + L+ A D + + + + D
Sbjct: 68 LDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 38.7 bits (89), Expect = 4e-04
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Query: 162 QDGRTYVTVNLLDANDHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEGLNDR 221
G + + + D + RY + G D+ ++ +S DR
Sbjct: 15 SRGPFPQELVRIRS-GRDKNLSLRYSVTGPG---ADQPPTGIFIINPISGQLSVTKPLDR 70
Query: 222 EHINKYNLTIIATDKGNPPRTATAFLIIHVND 253
E I +++L A D ++I+V D
Sbjct: 71 ELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 33.3 bits (75), Expect = 0.039
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 5 TVDHSVQVSDTLQNSKAKVTANPSGETSYLYLQTTGKLDRETVDFYQLNISARDGGTPTR 64
++ +SV Q NP + DRE + + L A D
Sbjct: 35 SLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL----DRELIARFHLRAHAVDINGNQV 90
Query: 65 YGYLQVNVTILD 76
+ + + ++D
Sbjct: 91 ENPIDIVINVID 102
Score = 29.8 bits (66), Expect = 0.57
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 443 IPEDTQVGVSIVQVSAYDLDCGKNAQVTYSIESG 476
+PE+ G ++ KN + YS+
Sbjct: 11 LPEN-SRGPFPQELVRIRSGRDKNLSLRYSVTGP 43
Score = 26.7 bits (58), Expect = 5.6
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 555 GDPKKKFEINDRTGEIITAAKLDREEQSIYNLVVSAR---SRLSYGKTFVNITLLD 607
P F IN +G++ LDRE + ++L A + I ++D
Sbjct: 47 QPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog
(Xenopus laevis) [TaxId: 8355]}
Length = 100
Score = 63.2 bits (153), Expect = 1e-12
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 1047 ISVYENTTVNTQLFHFQATDSDIGVNNEVLFSIGSGN----KRDTFHMDPVTGILYLHKK 1102
I V EN S+ N+V +SI + F ++ TG + + +
Sbjct: 7 IKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 1103 LDYEEINSYVLNVTASDGGTPRLSTIFMFTINVED 1137
LD EE + YVL+ A + TINV D
Sbjct: 66 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 61.3 bits (148), Expect = 4e-12
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 939 VQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDEH----FSIDEATGQITISKL 994
+++SE G R+ + +++ VYY I D F I+ TG + +++
Sbjct: 7 IKVSEN-ERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 995 LDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLD 1032
LDRE K+ L A + + +TI+V+D
Sbjct: 66 LDREEYDKYVLSSHAVSEN---GSPVEEPMEITINVID 100
Score = 58.6 bits (141), Expect = 4e-11
Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 622 ITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSSN-----PDDQFKIVETNGVIYLNKP 676
I + EN + + ++++YS++ P F+I G + + +P
Sbjct: 7 IKVSENERGPFPKRLV-QIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 677 IQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQD 711
+ + A + + + + D
Sbjct: 66 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 54.0 bits (129), Expect = 2e-09
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 741 LVAKDSDLGNNGFVSYSIIEGNGED----KFGIFPD-GFMYVRNSLDRETRDYYALTVLA 795
LV S+ V YSI ++ F I + G+M V LDRE D Y L+ A
Sbjct: 21 LVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHA 80
Query: 796 EDHGKYPRSSSVPVVIHIID 815
P + + I++ID
Sbjct: 81 VSENGSPVEEPMEITINVID 100
Score = 52.5 bits (125), Expect = 6e-09
Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Query: 830 FSVMENLPPDSFVGKLIATDKDVGRNAELSFALSN------AKGDFEIDSRNGFIKTMRS 883
V EN F +L+ + R ++ ++++ +G F I+ G++ R
Sbjct: 7 IKVSENERG-PFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 884 FDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITD 924
DRE + L + +++ +++ + + D
Sbjct: 66 LDREE------YDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 50.5 bits (120), Expect = 3e-08
Identities = 9/95 (9%), Positives = 29/95 (30%), Gaps = 14/95 (14%)
Query: 93 VSLNESVLPGTKVLQVIATDNDQGDNAKITYYLSETERKFTN-------------CQQQR 139
+ ++E+ G +++ +++ K+ Y ++ +
Sbjct: 7 IKVSENE-RGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 140 PGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLD 174
V + A + +T+N++D
Sbjct: 66 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 46.3 bits (109), Expect = 8e-07
Identities = 7/86 (8%), Positives = 25/86 (29%), Gaps = 20/86 (23%)
Query: 277 GSYVAGITATDEDTGVNAQIFYAFVSGNEHQW----FEINPTSGLI-------------- 318
G + + + +++Y+ F I +G +
Sbjct: 15 GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKY 74
Query: 319 --TTKTRDGGPNPKWAYTQLKVSILD 342
++ +P ++ ++++D
Sbjct: 75 VLSSHAVSENGSPVEEPMEITINVID 100
Score = 37.8 bits (87), Expect = 9e-04
Identities = 16/95 (16%), Positives = 24/95 (25%), Gaps = 26/95 (27%)
Query: 357 ISLLENSAANTLVATLTASDHDQ-------------------------DSITGQLTVKTK 391
I + EN L ++ + TG + V
Sbjct: 7 IKVSENERG-PFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 392 LDRETITDYELKVIAKDHGTPPQSSTATVFLFIED 426
LDRE Y L A P + + + D
Sbjct: 66 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 35.5 bits (81), Expect = 0.006
Identities = 13/94 (13%), Positives = 24/94 (25%), Gaps = 36/94 (38%)
Query: 195 TVDENAINGSVVAAVSVVDPDEGLNDR--------------------------------- 221
V EN G + + ++ ++
Sbjct: 8 KVSENE-RGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPL 66
Query: 222 --EHINKYNLTIIATDKGNPPRTATAFLIIHVND 253
E +KY L+ A + P + I+V D
Sbjct: 67 DREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 32.8 bits (74), Expect = 0.043
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 443 IPEDTQVGVSIVQVSAYDLDCGKNAQVTYSIESGS 477
+ E+ + G ++ + + +V YSI
Sbjct: 9 VSEN-ERGPFPKRLVQIKSNKDRFNKVYYSITGQG 42
Score = 29.7 bits (66), Expect = 0.58
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 45 ETVDFYQLNISARDGGTPTRYGYLQVNVTILD 76
E D Y L+ A +++ + ++D
Sbjct: 69 EEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 28.6 bits (63), Expect = 1.4
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 546 DQIKYAIVYGD----PKKKFEINDRTGEIITAAKLDREEQSIYNLVVSARSRLS---YGK 598
+++ Y+I P+ F I TG ++ LDREE Y L A S
Sbjct: 32 NKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEP 91
Query: 599 TFVNITLLD 607
+ I ++D
Sbjct: 92 MEITINVID 100
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 136
Score = 61.2 bits (147), Expect = 1e-11
Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 18/130 (13%)
Query: 342 DENDEKPQFTQNVLNISLLENSAANTLVATLTASDHD---------------QDSITGQL 386
+ K F ++V + L ++ + + S+ + + G +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGTV 64
Query: 387 TVKTKLDRETITDYELKVIAKDHGTPPQSSTATVFLFIEDVNDNNPVFYPSQYFK-QIPE 445
+ + A+D T + V L E P+ P + + P
Sbjct: 65 YAVRSFPLT-AEQAKFLIYAQDKETQEKWQV-AVNLSREPTLTEEPMKEPHEIEEIVFPR 122
Query: 446 DTQVGVSIVQ 455
+Q
Sbjct: 123 QLAKHSGALQ 132
Score = 58.5 bits (140), Expect = 1e-10
Identities = 13/118 (11%), Positives = 27/118 (22%), Gaps = 7/118 (5%)
Query: 711 DVNDHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLGNNGFVSYSIIEGNGEDKFGIF 770
++ F Y L + + + + E + F +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN-----RKRKVQYESSEPADFKVD 59
Query: 771 PDGFMYVRNSLDRETRDYYALTVLAEDHGKYPRSSSVPVVIHIIDENDNKPEFSNSSF 828
DG +Y S + A+D + V + +P
Sbjct: 60 EDGTVYAVRSFPLTAEQAK-FLIYAQDKETQEKWQVA-VNLSREPTLTEEPMKEPHEI 115
Score = 56.5 bits (135), Expect = 6e-10
Identities = 9/116 (7%), Positives = 26/116 (22%), Gaps = 8/116 (6%)
Query: 1032 DENDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGVNNEVLFSIGSGNKRDTFHMD 1091
+ F + + ++ L + + ++ + + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQY------ESSEPADFKV 58
Query: 1092 PVTGILYLHKKLDYEEINSYVLNVTASDGGTPRLSTIFMFTINVEDCNDNPPSFPN 1147
G +Y + + A D T ++ E P
Sbjct: 59 DEDGTVYAVRSFPLTAEQ-AKFLIYAQDKETQEKW-QVAVNLSREPTLTEEPMKEP 112
Score = 54.2 bits (129), Expect = 3e-09
Identities = 14/135 (10%), Positives = 33/135 (24%), Gaps = 12/135 (8%)
Query: 924 DQNDNSPQFLRTPYKVQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDEHFSID 983
+ F Y + + G + V + + K+ + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR------KRKVQYESSEPADFKV 58
Query: 984 EATGQITISKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLDENDNAPMFVKT 1043
+ G + + + + A+D Q V + PM
Sbjct: 59 DEDGTVYAVRSFPLTAE-QAKFLIYAQDK----ETQEKWQVAVNLSREPTLTEEPMKEPH 113
Query: 1044 E-SKISVYENTTVNT 1057
E +I ++
Sbjct: 114 EIEEIVFPRQLAKHS 128
Score = 54.2 bits (129), Expect = 3e-09
Identities = 16/130 (12%), Positives = 39/130 (30%), Gaps = 7/130 (5%)
Query: 607 DLNDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSSNPDDQFKIVE 666
++ F D +P++ GQ + + + + + + V+
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYES-----SEPADFKVD 59
Query: 667 TNGVIYLNKPIQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQDVNDHTPVFDMSSYET 726
+G +Y + I A D Q + +VN+ + P+ + E
Sbjct: 60 EDGTVYAVRSFPLTA-EQAKFLIYAQDKETQEK-WQVAVNLSREPTLTEEPMKEPHEIEE 117
Query: 727 SLLESTPVNN 736
+ +
Sbjct: 118 IVFPRQLAKH 127
Score = 52.7 bits (125), Expect = 1e-08
Identities = 10/140 (7%), Positives = 35/140 (25%), Gaps = 13/140 (9%)
Query: 815 DENDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSFALSNAKGDFEIDSR 874
+ K F + + +++ + + ++ + R +++
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRK----VQYESSEPADFKVDE 60
Query: 875 NGFIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITDQNDNSPQFL- 933
+G + +RSF D + V++ P
Sbjct: 61 DGTVYAVRSFPLT-------AEQAKFLIYAQDKETQEKWQVA-VNLSREPTLTEEPMKEP 112
Query: 934 RTPYKVQISEGASIGTQVFR 953
++ + + +
Sbjct: 113 HEIEEIVFPRQLAKHSGALQ 132
Score = 52.3 bits (124), Expect = 2e-08
Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 11/125 (8%)
Query: 253 DVNDHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTGVNAQIFYAFVSGNEHQ----- 307
++ + F + YSAVL + G + + ++ + Q + + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGTV 64
Query: 308 ----WFEINPTSGLITTKTRDGGPNPKWAYTQLKVSILDENDEKPQF-TQNVLNISLLEN 362
F + +D KW + +S E+P + I
Sbjct: 65 YAVRSFPLTAEQAKFLIYAQDKETQEKW-QVAVNLSREPTLTEEPMKEPHEIEEIVFPRQ 123
Query: 363 SAANT 367
A ++
Sbjct: 124 LAKHS 128
Score = 48.4 bits (114), Expect = 3e-07
Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 5/117 (4%)
Query: 76 DVNDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAKITYYLSETERKFTNC 135
++ F V YS L + V G +L V ++ ++ + + +
Sbjct: 5 EIALCKTGFPEDV--YSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDG 62
Query: 136 QQ--QRPGGSCPKSCVFTVFARDHGSPRQDGRTYVTVNLLDANDHDPVIKFRYFPST 190
R + F ++A+D + + V ++ +P+ +
Sbjct: 63 TVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVA-VNLSREPTLTEEPMKEPHEIEEI 118
Score = 39.6 bits (91), Expect = 4e-04
Identities = 7/46 (15%), Positives = 16/46 (34%)
Query: 426 DVNDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGKNAQVTY 471
++ F Y +P+D G ++ V + + + Q
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYES 50
Score = 36.5 bits (83), Expect = 0.005
Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 14/122 (11%)
Query: 512 YTFSILEDHDKMQENLGRDVGKIKIRNSDMQATIDQIKYAIVYGDPKKKFEINDRTGEII 571
Y+ + +D + G+ + +K N + + + Y + D G +
Sbjct: 18 YSAVLPKD-----VHEGQPLLNVKFSNCNRK-------RKVQYESSEPADFKVDEDGTVY 65
Query: 572 TAAKLDREEQSI-YNLVVSARSRLSYGKTFVNITLLDLNDNAPIF-NRDKDEITIPENAA 629
+ + + + + VN++ P+ + +EI P A
Sbjct: 66 AVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEPHEIEEIVFPRQLA 125
Query: 630 VG 631
Sbjct: 126 KH 127
Score = 36.1 bits (82), Expect = 0.006
Identities = 13/121 (10%), Positives = 28/121 (23%), Gaps = 30/121 (24%)
Query: 174 DANDHDPVIKFRYFPSTAGFATVDENAINGSVVAAVSVVDPDEGLNDREHI--------- 224
+ FP A + ++ G + V + + +
Sbjct: 5 EIALCKTG-----FPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVD 59
Query: 225 ---------------NKYNLTIIATDKGNPPRTATAFLIIHVNDVNDHEPVFEKSEYSAV 269
+ I A DK + + + EP+ E E +
Sbjct: 60 EDGTVYAVRSFPLTAEQAKFLIYAQDKETQEK-WQVAVNLSREPTLTEEPMKEPHEIEEI 118
Query: 270 L 270
+
Sbjct: 119 V 119
Score = 32.3 bits (72), Expect = 0.15
Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Query: 33 YLYLQTTGKLDRETVDFYQLNISARDGGTPTRYGYLQVNVTILDVNDNPPIFAHSVSDYS 92
+ + + I A+D T ++ + VN++ P+
Sbjct: 61 DGTVYAVRSFPLTA-EQAKFLIYAQDKETQEKW-QVAVNLSREPTLTEEPMK-EPHEIEE 117
Query: 93 VSLNESVLPGTKVLQ 107
+ + + LQ
Sbjct: 118 IVFPRQLAKHSGALQ 132
Score = 26.9 bits (58), Expect = 9.7
Identities = 2/26 (7%), Positives = 7/26 (26%)
Query: 1137 DCNDNPPSFPNTAIVRQIRENIPINT 1162
+ FP + +++
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQ 30
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 53.9 bits (128), Expect = 2e-09
Identities = 18/112 (16%), Positives = 27/112 (24%), Gaps = 8/112 (7%)
Query: 1034 NDNAPMFVKTESKISVYENTTVNTQLFHFQATDSDIGVNNEVLFSIGSGNK-RDTFHMDP 1092
NDN P+ ++ + +D+DI N S
Sbjct: 1 NDNGPVPSPRV--FTMCDQNPEPQV---LTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 1093 VTGILYLHKKLDYEEINSYVLNVTASDGGTPRLSTIFMFTINVEDCNDNPPS 1144
G L + Y + V SD T + V C
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLT--VVNATVCSCEGKAIK 105
Score = 46.6 bits (109), Expect = 7e-07
Identities = 16/110 (14%), Positives = 30/110 (27%), Gaps = 5/110 (4%)
Query: 609 NDNAPIFNRDKDEITIPENAAVGQEIYVARARDRDSGVNSRIFYSLSSNPDDQFKIVETN 668
NDN P+ T+ + Q + D + +++
Sbjct: 1 NDNGPVP--SPRVFTMCDQNPEPQ-VLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSK 57
Query: 669 GVIYLNKPIQSPPGSTLTIEIVASDSGKQSLSSKHSVNVYIQDVNDHTPV 718
G L P Q +I ++ SD+ + VN +
Sbjct: 58 GTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLT--VVNATVCSCEGKAIK 105
Score = 46.2 bits (108), Expect = 1e-06
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 11/114 (9%)
Query: 926 NDNSPQFLRTPYKVQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGND-DEHFSIDE 984
NDN P +P + + + + DAD N Y +S + +
Sbjct: 1 NDNGPVP--SPRVFTMCDQNPEPQVL---TISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 985 ATGQITISKLLDRETVSKFNLKVLARDAATVVSNQLSSTTMVTIDVLDENDNAP 1038
+ G + + +++ VL D + T+V V A
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSD-----AQNNPQLTVVNATVCSCEGKAI 104
Score = 43.5 bits (101), Expect = 1e-05
Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 5/109 (4%)
Query: 713 NDHTPVFDMSSYETSLLESTPVNNRFFELVAKDSDLGNNGFVSYSIIEGNGEDKFGIFPD 772
ND+ PV + P + D + + K +
Sbjct: 1 NDNGPVPSPRVFTMCDQNPEPQV---LTISDADIPPNTYPYKVSLSHGSDLTWKAELDSK 57
Query: 773 GFMYVRNSLDRETRDYYALTVLAEDHGKYPRSSSVPVVIHIIDENDNKP 821
G + + + + Y++ VL D P+ + V +
Sbjct: 58 GTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNA--TVCSCEGKAI 104
Score = 39.3 bits (90), Expect = 3e-04
Identities = 15/114 (13%), Positives = 26/114 (22%), Gaps = 19/114 (16%)
Query: 78 NDNPPIFAHSVSDYSVSLNESVLPGTKVLQVIATDNDQGDNAKITYYLSETERKFTNCQQ 137
NDN P+ + V +++ + +D D N T +
Sbjct: 1 NDNGPVPSPRV--FTMCDQNPE-----PQVLTISDADIPPNTYPYKVSLSHGSDLTWKAE 53
Query: 138 QRPGGSCPKSCV----------FTVFARDHGSPRQDGRTYVTVNLLDANDHDPV 181
G+ V D + Q T V +
Sbjct: 54 LDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQ--LTVVNATVCSCEGKAIK 105
Score = 37.4 bits (85), Expect = 0.001
Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 817 NDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSFALSNAKGDFEIDSRNG 876
NDN P S F++ + P L +D D+ N + +
Sbjct: 1 NDNGPVPSPRV--FTMCDQNPE---PQVLTISDADIPPNTYPYK---VSLSHGSDLTWKA 52
Query: 877 FIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITDQNDNSPQ 931
+ + + + Q + S+ +SD + V V + +
Sbjct: 53 ELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNATV--CSCEGKAIK 105
Score = 36.6 bits (83), Expect = 0.003
Identities = 16/112 (14%), Positives = 26/112 (23%), Gaps = 29/112 (25%)
Query: 344 NDEKPQFTQNVLNISLLENSAANTLVATLTASDHD----------------------QDS 381
ND P + V + LT SD D +
Sbjct: 1 NDNGPVPSPRVFTMCDQNPE-----PQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 382 ITGQLTVKTKLDRETITDYELKVIAKDHGTPPQSSTATVFLFIEDVNDNNPV 433
G + + + DY + V+ D PQ + +
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNAT--VCSCEGKAIK 105
Score = 36.2 bits (82), Expect = 0.004
Identities = 13/110 (11%), Positives = 28/110 (25%), Gaps = 20/110 (18%)
Query: 255 NDHEPVFEKSEYSAVLSELAPAGSYVAGITATDEDTGVNAQIFYAFVSGNEHQWFEINPT 314
ND+ PV ++ +T +D D N + +S ++
Sbjct: 1 NDNGPVPSPRVFTMCDQN-----PEPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 315 SGLITTKTRDGGPNPKWAY---------------TQLKVSILDENDEKPQ 349
S + K Y T + ++ + +
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNATVCSCEGKAIK 105
Score = 35.1 bits (79), Expect = 0.009
Identities = 5/42 (11%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 219 NDREHINKYNLTIIATDKGNPPRTATAFLIIHVNDVNDHEPV 260
+ Y++ ++ +D N P+ + V
Sbjct: 66 TQQLKKGDYSIYVLLSDAQNNPQLTV--VNATVCSCEGKAIK 105
Score = 31.6 bits (70), Expect = 0.13
Identities = 5/40 (12%), Positives = 10/40 (25%), Gaps = 2/40 (5%)
Query: 43 DRETVDFYQLNISARDGGTPTRYGYLQVNVTILDVNDNPP 82
+ Y + + D + VN T+
Sbjct: 67 QQLKKGDYSIYVLLSDAQNNPQLT--VVNATVCSCEGKAI 104
Score = 29.7 bits (65), Expect = 0.64
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 531 VGKIKIRNSDMQATIDQIKYAIVYGDPKKKFEINDRTGEIITAAKLDREEQSIYNLVVSA 590
+ I ++D+ K ++ +G D G + + + ++ Y++ V
Sbjct: 21 PQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLL 80
Query: 591 RSRLSYGK-TFVNITLLDLNDNAP 613
+ + T VN T+ A
Sbjct: 81 SDAQNNPQLTVVNATVCSCEGKAI 104
Score = 28.1 bits (61), Expect = 2.2
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 5/44 (11%)
Query: 428 NDNNPVFYPSQYFKQIPEDTQVGVSIVQVSAYDLDCGKNAQVTY 471
NDN PV P + + + ++ D D N
Sbjct: 1 NDNGPVPSPRVFT--MCDQNPEP---QVLTISDADIPPNTYPYK 39
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 522
Score = 30.4 bits (68), Expect = 1.3
Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 29/192 (15%)
Query: 813 IIDENDNKPEFSNSSFVFSVMENLPPDSFVGKLIATDKDVGRNAELSFALSNAKGDFEID 872
++ +D+KPE ++ + + +N P S D G E+S L G
Sbjct: 111 VLTISDSKPEHTSYASNLLLRKN--PTSLPLGQYPEDVKFGDPREIS--LRVGNGPTLAF 166
Query: 873 SRNGFIKTMRSFDRENLLQTTGQNFISLEATVSDNGSPRLKDKVKVDVYITDQNDNSPQF 932
S G +K+++ +++ F+ + S Y+ N +
Sbjct: 167 SEQGLLKSIQL-TQDSPHVPVHFKFLKYGVRSHGDRS---------GAYLFLPNGPASPV 216
Query: 933 LRTPYKVQISEGASIGTQVFRVSTMDADEGLNGDVYYKIISGNDDEHFSIDEATGQITIS 992
V +++G + + V V + E + I
Sbjct: 217 ELGQPVVLVTKG-KLESSVS--------------VGLPSVVHQTIMRGGAPEIRNLVDIG 261
Query: 993 KLLDRETVSKFN 1004
L + E V +
Sbjct: 262 SLDNTEIVMRLE 273
>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion
and metastasis inducing protein 1) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 162
Score = 29.0 bits (65), Expect = 2.1
Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 840 SFVGKLIATDKDVGRNAELSFALSNAKGDFEIDSRNGFIKTMRSFDREN 888
+ V +++ + E F L + + R F+K++ S R+
Sbjct: 114 NAVCEIVHVKSESEGRPERVFHLCCSSPES----RKDFLKSVHSILRDK 158
>d2fhzb1 d.243.1.2 (B:12-104) Colicin E5 {Escherichia coli [TaxId:
562]}
Length = 93
Score = 27.6 bits (61), Expect = 2.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 551 AIVYGDPKKKFEINDRTGEIITAAK 575
A VYG P K +NDRTGE+ +
Sbjct: 53 ATVYGSPGKYVVVNDRTGEVTQISD 77
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.370
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,160,159
Number of extensions: 197387
Number of successful extensions: 589
Number of sequences better than 10.0: 1
Number of HSP's gapped: 507
Number of HSP's successfully gapped: 138
Length of query: 1186
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1091
Effective length of database: 1,103,246
Effective search space: 1203641386
Effective search space used: 1203641386
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.6 bits)