BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2601
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z336|DYLT1_RAT Dynein light chain Tctex-type 1 OS=Rattus norvegicus GN=Dynlt1 PE=1
SV=1
Length = 113
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 83/107 (77%)
Query: 26 TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
+E++ F VDE+S I+KEAIE IGGN Y +KV+ + + VVE ++ L KL KPFKY+V
Sbjct: 7 SEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVT 66
Query: 86 GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 67 CVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113
>sp|P63172|DYLT1_HUMAN Dynein light chain Tctex-type 1 OS=Homo sapiens GN=DYNLT1 PE=1 SV=1
Length = 113
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
E++ F VDE+S I+KEAIE IGGN Y +KV+ + + VVE ++ L KL KPFKY+V
Sbjct: 8 EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67
Query: 87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 68 VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113
>sp|P63171|DYLT1_BOVIN Dynein light chain Tctex-type 1 OS=Bos taurus GN=DYNLT1 PE=1 SV=1
Length = 113
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
E++ F VDE+S I+KEAIE IGGN Y +KV+ + + VVE ++ L KL KPFKY+V
Sbjct: 8 EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67
Query: 87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 68 VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113
>sp|P51807|DYLT1_MOUSE Dynein light chain Tctex-type 1 OS=Mus musculus GN=Dynlt1 PE=1 SV=1
Length = 113
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 83/107 (77%)
Query: 26 TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
+E++ F VDE+S I+KEAIE IGGN Y +KV+ + + V+E ++ L KL +PFKY+V
Sbjct: 7 SEETAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVT 66
Query: 86 GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+MQK GAGLH++SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 67 CVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLSI 113
>sp|Q94524|DYLT_DROME Dynein light chain Tctex-type OS=Drosophila melanogaster GN=Dlc90F
PE=1 SV=1
Length = 111
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
E+S+F VD++S IKEAIE IGGN Y KV+ + QVVE + L K KP+KY+V
Sbjct: 6 EESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTA 65
Query: 87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+MQK GAGLHT+SSC W+++TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 66 MIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
>sp|Q6XXL8|DYLT3_SHEEP Dynein light chain Tctex-type 3 OS=Ovis aries GN=DYNLT3 PE=3 SV=1
Length = 116
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 71/102 (69%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
F DE I+KE I+ +GG YN ++ + + +VE +A+L+KL K +KY+V V+Q
Sbjct: 13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLAHLVKLGKAYKYIVTCAVVQ 72
Query: 91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+ G HT+SSC WD +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73 RSPYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114
>sp|Q8SPS9|DYLT3_CANFA Dynein light chain Tctex-type 3 OS=Canis familiaris GN=DYNLT3 PE=3
SV=1
Length = 116
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
F DE I+KE I+ +GG YN ++ + + +VE + +L+KL K +KY+V V+Q
Sbjct: 13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72
Query: 91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+ G HT+SSC WD +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73 RSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114
>sp|P56387|DYLT3_MOUSE Dynein light chain Tctex-type 3 OS=Mus musculus GN=Dynlt3 PE=1 SV=1
Length = 116
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
F DE I+KE ++ +GGN YN ++ + + +VE + +L+KL K +KY+V V+Q
Sbjct: 13 FNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAVVQ 72
Query: 91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
+ G HT+SSC WD +DG+CT+RWEN+TM CIV+V+A+A+
Sbjct: 73 RSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVAI 114
>sp|Q5NVF5|DYLT3_PONAB Dynein light chain Tctex-type 3 OS=Pongo abelii GN=DYNLT3 PE=3 SV=1
Length = 116
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
F +E I+KE ++ +GG YN ++ + + +VE + +L+KL K +KY+V V+Q
Sbjct: 13 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72
Query: 91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
K G HT+SSC WD +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73 KSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114
>sp|P51808|DYLT3_HUMAN Dynein light chain Tctex-type 3 OS=Homo sapiens GN=DYNLT3 PE=1 SV=1
Length = 116
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
F +E I+KE ++ +GG YN ++ + + +VE + +L+KL K +KY+V V+Q
Sbjct: 13 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72
Query: 91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
K G HT+SSC WD +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73 KSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114
>sp|Q54PG1|DYLT_DICDI Dynein light chain Tctex-type OS=Dictyostelium discoideum GN=dlcA
PE=3 SV=2
Length = 111
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 28 DSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLD-KPFKYVVNG 86
D F V+EI IIKEA+E + Y +V + +++ + + +L+ K +KY+VN
Sbjct: 6 DQPFVVEEILTIIKEAVEISLQNTVYQHKQVPQWTQSIIDHSLKKISELNNKSYKYIVNC 65
Query: 87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYA 129
+ QK GAG HT+SSCLWD DGSC+ RWENK+M+CI+SV+
Sbjct: 66 LIFQKTGAGFHTASSCLWDSANDGSCSYRWENKSMHCIISVFG 108
>sp|Q5JR98|TC1D4_HUMAN Tctex1 domain-containing protein 4 OS=Homo sapiens GN=TCTEX1D4 PE=1
SV=1
Length = 221
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 53 YNSAKVSTYVSQVVETIMANLIKLDKP-FKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGS 111
Y+S + + V ++ E + L +L P +K V + + + G G+H S LWD DG
Sbjct: 140 YSSDEAARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGL 199
Query: 112 CTVRWENKTMYCIVSVYAL 130
+V + N +++ + +V+ L
Sbjct: 200 ASVSYTNTSLFAVATVHGL 218
>sp|Q8CDY7|TC1D4_MOUSE Tctex1 domain-containing protein 4 OS=Mus musculus GN=Tctex1d4 PE=2
SV=1
Length = 219
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 40 IKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKP-FKYVVNGTVMQKLGAGLHT 98
++ A+ + G Y ++ V + E I + +L+ P +K V N + + G G+H
Sbjct: 125 LEAALTTQLNGVCYCGSEAGKLVQALCEQIHTRVRELNLPRYKLVCNVVLGPREGQGVHV 184
Query: 99 SSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
S LWD DG + + N +++ + +V+A+
Sbjct: 185 VSRALWDAVHDGLASATFTNPSLFAVATVHAV 216
>sp|Q8WW35|TC1D2_HUMAN Tctex1 domain-containing protein 2 OS=Homo sapiens GN=TCTEX1D2 PE=1
SV=2
Length = 142
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANL--IKLDKPFKYVVNGTVMQK 91
D I ++KE + + Y+ ++ + E I L + D+ +K VV + ++
Sbjct: 46 DCIHAVLKEELANA----EYSPEEMPQLTKHLSENIKDKLKEMGFDR-YKMVVQVVIGEQ 100
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYA 129
G G+ +S C WD +TD + N +++C+V+ +
Sbjct: 101 RGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFG 138
>sp|Q32P71|TC1D2_BOVIN Tctex1 domain-containing protein 2 OS=Bos taurus GN=TCTEX1D2 PE=2
SV=2
Length = 152
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANL--IKLDKPFKYVVNGTVMQK 91
D I ++KE + + Y+ ++ + E I L + D+ +K VV + ++
Sbjct: 56 DCIHAVLKEELANA----EYSPEEMPQLTKHLSENIKDKLKEMGFDR-YKMVVQVVIGEQ 110
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVY 128
G G+ ++ C WD +TD + N +++C+V+ +
Sbjct: 111 RGEGVFMAARCFWDADTDNCTHDVFMNDSLFCVVAAF 147
>sp|Q4VYA0|TC1D4_PIG Tctex1 domain-containing protein 4 OS=Sus scrofa GN=TCTEX1D4 PE=2
SV=1
Length = 219
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 53 YNSAKVSTYVSQVVETIMANLIKLDKP-FKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGS 111
Y A+ ++ + +L +L P +K V + + + G G+H S LWD DG
Sbjct: 138 YVGAEAGRLARELCDLARVHLRELSPPRYKLVCSVVLGPRAGQGVHVPSRALWDTACDGL 197
Query: 112 CTVRWENKTMYCIVSVYAL 130
+ N +++ + +V+ L
Sbjct: 198 ASATVTNASLFAVATVHGL 216
>sp|A2VDD2|TC1DB_XENLA Tctex1 domain-containing protein 1-B (Fragment) OS=Xenopus laevis
GN=tctex1d1-b PE=2 SV=1
Length = 176
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 30 KFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKP-FKYVVNGTV 88
+F V ++ I+K+ + + Y + + E I A + L P +K +V +
Sbjct: 72 RFPVASVNNILKDVLTSYLQEEKYEAELCRQMTKTISEVIKARVKDLMIPRYKIIVLIYI 131
Query: 89 MQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
Q G+ S C+WD D + ++N +++ + +VY +
Sbjct: 132 GQLNDQGMRVGSRCIWDPANDTFSSYSFKNSSLFALANVYGV 173
>sp|Q9CQ66|TC1D2_MOUSE Tctex1 domain-containing protein 2 OS=Mus musculus GN=Tctex1d2 PE=2
SV=1
Length = 144
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKL--DKPFKYVVNGTVMQK 91
D I ++KE + Y+ ++ ++ E I L +L D+ +K VV + ++
Sbjct: 48 DCIHTVLKEEL----ASAEYSPDEMPQLTKRLSEMIKDKLKELGYDR-YKMVVQVVIGEQ 102
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYA 129
G G+ ++ C WD +TD + N +++C+V+ +
Sbjct: 103 RGEGVFMAARCFWDADTDNYTHDVFMNDSLFCVVAAFG 140
>sp|Q66IC8|TC1D1_DANRE Tctex1 domain-containing protein 1 OS=Danio rerio GN=tctex1d1 PE=2
SV=1
Length = 173
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 26 TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKP-FKYVV 84
T +F V + ++K+ + + Y + + E + A + L P +K +V
Sbjct: 65 TPSRRFPVLTVKDLLKDVLTSYLQEEKYETELCRQMTKTITEVVKARVKDLMIPRYKIIV 124
Query: 85 NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
++ Q + S CLWDDN D + ++N +++ +V+ +
Sbjct: 125 VISIGQIKDQNIRMGSRCLWDDNHDNFSSHIFKNNSLFAAATVFGV 170
>sp|Q9UTS6|DYLT_SCHPO Dynein light chain Tctex-type OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=dlc1 PE=1 SV=1
Length = 111
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 42 EAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKL-----GAGL 96
EA + + + Y+ K + V+ ++ L K + +K++V+ T++QKL G+
Sbjct: 16 EAAQPVLKASEYDGDKTAEMNQSVIYAVLNALNKETQSYKWIVSSTLVQKLPEDHPSRGV 75
Query: 97 HTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
H + + W+ DG T++ + + ++S+ +++
Sbjct: 76 HAAHAACWNCEKDGMTTIKESGEAIDVVLSIMWISI 111
>sp|Q8N7M0|TC1D1_HUMAN Tctex1 domain-containing protein 1 OS=Homo sapiens GN=TCTEX1D1 PE=2
SV=2
Length = 179
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 1 MEAATQPSTLSTKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVST 60
ME +Q +S V G + F V ++ I+K+ + + Y
Sbjct: 48 MEEPSQRDDISRLTVQMENTYQLGPPKH--FPVVTVNHILKDVVTSYLQVEEYEPELCRQ 105
Query: 61 YVSQVVETIMANLIKLDKP-FKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENK 119
+ E I A + L P +K +V + Q + S CLWD +D + + N
Sbjct: 106 MTKTISEVIKAQVKDLMIPRYKLIVIVHIGQLNRQSILIGSRCLWDPKSDTFSSYVFRNS 165
Query: 120 TMYCIVSVYALAL 132
+++ + +VYA+ L
Sbjct: 166 SLFALANVYAVYL 178
>sp|Q3B8D7|TC1DA_XENLA Tctex1 domain-containing protein 1-A OS=Xenopus laevis
GN=tctex1d1-a PE=2 SV=1
Length = 177
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 30 KFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKP-FKYVVNGTV 88
+F V ++ I+K+ + + Y + + E I A + L P +K +V +
Sbjct: 73 RFPVASVNNILKDVLTSYLQEEKYEAELCRQMTKTISEVIKARVKDLMIPRYKIIVLIYI 132
Query: 89 MQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
Q + S C+WD D + ++N +++ + +VY +
Sbjct: 133 GQLNDQSMRVGSRCIWDPANDTFSSYSFKNSSLFALANVYGV 174
>sp|Q9D5I4|TC1D1_MOUSE Tctex1 domain-containing protein 1 OS=Mus musculus GN=Tctex1d1 PE=2
SV=1
Length = 173
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 31 FAVDEISCIIKEAIEDCIGGNTYNS---AKVSTYVSQVVETIMANLIKLDKPFKYVVNGT 87
F V ++ I+++ + + Y+ +++ +S+V++T + L+ +K +V
Sbjct: 70 FPVATVNHILEDVLTTYLQEAQYDPEFCRQMTKTISEVIKTQVKELVI--PRYKLIVIVY 127
Query: 88 VMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
+ Q+ + S CLW+ +D + ++N T + + +VYA+
Sbjct: 128 IGQRDDQSIVIGSRCLWNPKSDTVSSYTFKNSTFFALANVYAV 170
>sp|A1VUS4|MNME_POLNA tRNA modification GTPase MnmE OS=Polaromonas naphthalenivorans
(strain CJ2) GN=mnmE PE=3 SV=1
Length = 478
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 3 AATQPSTLSTKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAK----- 57
AA P+T A PG TE + F D+I EAI D I +T +A+
Sbjct: 104 AALDPATGQPVLAQLRVAEPGEFTERA-FLNDKIDLAQAEAIADLIDASTETAARSAARS 162
Query: 58 VSTYVSQVVETIMANLIKL 76
+S SQ V T++ LI L
Sbjct: 163 MSGEFSQAVNTLLEQLIHL 181
>sp|Q8IZS6|TC1D3_HUMAN Tctex1 domain-containing protein 3 OS=Homo sapiens GN=TCTE3 PE=1
SV=1
Length = 198
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 80 FKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
+K+++ +QK G ++ +S +WD D + E ++ +V V+AL
Sbjct: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
>sp|P11985|TC1D3_MOUSE Tctex1 domain-containing protein 3 OS=Mus musculus GN=Tcte3 PE=1
SV=2
Length = 191
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 30 KFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLD-KPFKYVVNGTV 88
KF + I++ ++D + Y+ K ++ + I+A + + +K+++
Sbjct: 88 KFQAHLVETKIQQILKDSLKDVKYDD-KAPHLSLELADGILAAVKEFAYHRYKFIIQVLF 146
Query: 89 MQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
+QK G ++ +S +WD D + E ++ + V+AL
Sbjct: 147 IQKTGQAINIASRWIWDVAWDNWVEAKHETESYVVLALVFAL 188
>sp|A5DUN2|CMC4_LODEL Cx9C motif-containing protein 4, mitochondrial OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=CMC4 PE=3 SV=1
Length = 90
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 26 TEDSKFAVDEISCIIKE-AIEDCIGGNTYNSAKVSTYVSQVVE 67
+E+S+ + +C K AI+DC+ GN YN AK + Y+ + +
Sbjct: 2 SEESQASQASQACQAKACAIQDCLQGNGYNEAKCTKYIDDLYQ 44
>sp|O97397|CATLL_PHACE Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1
Length = 324
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 67 ETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRW--ENKTMYCI 124
ET + + P VV G M+ G G+ SSCL D+ G V + EN Y I
Sbjct: 228 ETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQKYWI 287
Query: 125 V 125
+
Sbjct: 288 I 288
>sp|A5IYW8|RL15_MYCAP 50S ribosomal protein L15 OS=Mycoplasma agalactiae (strain PG2)
GN=rplO PE=3 SV=1
Length = 144
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 71 ANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWD--DNTDGSCTV 114
ANLIK P K + NG + +KL LH +S D + G T+
Sbjct: 98 ANLIKRSMPVKLLGNGKLTKKLNVTLHAASKSAIDAVEQAGGKFTI 143
>sp|Q5WWX9|HTPG_LEGPL Chaperone protein HtpG OS=Legionella pneumophila (strain Lens)
GN=htpG PE=3 SV=1
Length = 623
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 32 AVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQK 91
AV+ + I K ++ I T AK S + Q + I DK ++
Sbjct: 91 AVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVADK--------VTVKS 142
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKT 120
AGL +W+ DG T+ +E K+
Sbjct: 143 RRAGLQPEDGIVWESKGDGEFTIGYEKKS 171
>sp|A5IBL1|HTPG_LEGPC Chaperone protein HtpG OS=Legionella pneumophila (strain Corby)
GN=htpG PE=3 SV=1
Length = 623
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 32 AVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQK 91
AV+ + I K ++ I T AK S + Q + I DK ++
Sbjct: 91 AVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVADK--------VTVKS 142
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKT 120
AGL +W+ DG T+ +E K+
Sbjct: 143 RRAGLQPEDGIVWESKGDGEFTIGYEKKS 171
>sp|Q5ZVS1|HTPG_LEGPH Chaperone protein HtpG OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG
PE=3 SV=1
Length = 623
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 32 AVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQK 91
AV+ + I K ++ I T AK S + Q + I DK ++
Sbjct: 91 AVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVADK--------VTVKS 142
Query: 92 LGAGLHTSSSCLWDDNTDGSCTVRWENKT 120
AGL +W+ DG T+ +E K+
Sbjct: 143 RRAGLQPEDGIVWESKGDGEFTIGYEKKS 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,975,790
Number of Sequences: 539616
Number of extensions: 1655716
Number of successful extensions: 3540
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3514
Number of HSP's gapped (non-prelim): 38
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)