Query psy2601
Match_columns 132
No_of_seqs 112 out of 494
Neff 6.9
Searched_HMMs 13730
Date Fri Aug 16 20:22:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2601.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2601hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s16a1 d.14.1.3 (A:1217-1383) 47.0 10 0.00073 25.3 3.9 54 19-74 111-165 (167)
2 d1jiha1 d.240.1.1 (A:390-509) 45.9 28 0.002 21.4 5.8 41 54-94 19-62 (120)
3 d1urva_ a.1.1.2 (A:) Cytoglobi 35.9 31 0.0022 21.7 4.9 43 34-77 108-153 (154)
4 d2p02a1 d.130.1.1 (A:38-147) S 31.1 47 0.0034 20.4 4.9 34 57-90 14-47 (110)
5 d2tpta1 a.46.2.1 (A:1-70) Thym 30.7 21 0.0015 19.7 2.9 21 29-49 15-35 (70)
6 d1ei1a1 d.14.1.3 (A:221-392) D 30.2 26 0.0019 23.2 3.8 53 19-73 110-163 (172)
7 d1mxaa1 d.130.1.1 (A:1-102) S- 30.0 54 0.0039 19.8 5.2 33 57-89 14-46 (102)
8 d1a6ma_ a.1.1.2 (A:) Myoglobin 29.4 40 0.0029 20.9 4.6 42 34-76 105-149 (151)
9 d2gdma_ a.1.1.2 (A:) Leghemogl 27.7 48 0.0035 20.3 4.7 43 32-75 106-151 (153)
10 d1d8ua_ a.1.1.2 (A:) Non-symbi 27.2 63 0.0046 20.0 5.4 42 33-74 118-162 (165)
11 d2ia7a1 d.373.1.1 (A:23-133) U 26.4 61 0.0044 19.2 5.2 72 33-105 8-93 (111)
12 d1t33a2 a.121.1.1 (A:89-220) P 26.2 42 0.0031 21.0 4.2 38 39-76 93-130 (132)
13 d1ny721 b.121.4.2 (2:1-182) Co 23.9 27 0.002 23.6 2.9 48 70-117 62-128 (182)
14 d1uoua1 a.46.2.1 (A:33-100) Th 23.1 47 0.0034 18.1 3.5 20 29-48 15-34 (68)
15 d1c8ba_ c.56.1.2 (A:) Germinat 23.0 31 0.0023 25.9 3.3 47 29-75 309-355 (371)
16 d1h3la_ a.177.1.1 (A:) Sigma f 21.9 46 0.0034 18.0 3.4 37 32-68 30-68 (75)
17 d1e5da1 c.23.5.1 (A:251-402) R 21.6 30 0.0022 21.3 2.7 19 56-74 133-151 (152)
18 d1z84a1 d.13.1.2 (A:23-195) Ga 20.6 56 0.0041 21.2 4.1 31 61-94 122-154 (173)
No 1
>d1s16a1 d.14.1.3 (A:1217-1383) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=47.05 E-value=10 Score=25.31 Aligned_cols=54 Identities=7% Similarity=0.110 Sum_probs=36.2
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHHhhhCCC-CcCchhHHHHHHHHHHHHHHHHh
Q psy2601 19 TAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGN-TYNSAKVSTYVSQVVETIMANLI 74 (132)
Q Consensus 19 nty~~~p~~~~~F~~~~v~~ii~~vl~~~L~~~-~Y~~~~~~~~~~~I~~~I~~~lk 74 (132)
+.|..++ +.+..-.+++.+++.++.+.|... .=+++.+..+...+....+.|++
T Consensus 111 PqFeGQT--K~kL~n~~v~~~V~~~v~~~l~~~l~~np~~a~~i~~k~i~~~~~R~a 165 (167)
T d1s16a1 111 PQFAGQT--KERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMR 165 (167)
T ss_dssp CCBSSTT--CCCBCCTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccch--hhhccCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Confidence 4555443 677777788888888888777652 33566677777776666666654
No 2
>d1jiha1 d.240.1.1 (A:390-509) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.94 E-value=28 Score=21.40 Aligned_cols=41 Identities=5% Similarity=0.095 Sum_probs=27.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhccC---CCceEEEEEEEEEeCCc
Q psy2601 54 NSAKVSTYVSQVVETIMANLIKLD---KPFKYVVNGTVMQKLGA 94 (132)
Q Consensus 54 ~~~~~~~~~~~I~~~I~~~lk~l~---~ryK~vV~v~I~qk~gq 94 (132)
+..++..|-..++.++-.||+++. .+-+.--++++..+.+.
T Consensus 19 s~~~~~~WL~~la~el~~RL~~~~~~~~~~~~~kTltl~~r~~~ 62 (120)
T d1jiha1 19 SIVDCISWLEVFCAELTSRIQDLEQEYNKIVIPRTVSISLKTKS 62 (120)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEEEEeCC
Confidence 457899999999999999999853 23233344455445443
No 3
>d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.92 E-value=31 Score=21.66 Aligned_cols=43 Identities=9% Similarity=0.219 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhhhCCCCcCchhHHHHHH---HHHHHHHHHHhccC
Q psy2601 34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVS---QVVETIMANLIKLD 77 (132)
Q Consensus 34 ~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~---~I~~~I~~~lk~l~ 77 (132)
+.+.+++-++|.+.|++ .++++....|.+ .|++.|.+..++++
T Consensus 108 ~~~~~~l~~~l~~~lg~-~~t~~~~~AW~~~~~~i~~~m~~~yke~g 153 (154)
T d1urva_ 108 KILSGVILEVVAEEFAS-DFPPETQRAWAKLRGLIYSHVTAAYKEVG 153 (154)
T ss_dssp HHHHHHHHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccc-cCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45667777777777765 588888888884 45667777766653
No 4
>d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}
Probab=31.07 E-value=47 Score=20.41 Aligned_cols=34 Identities=9% Similarity=0.151 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCceEEEEEEEEE
Q psy2601 57 KVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90 (132)
Q Consensus 57 ~~~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~q 90 (132)
.-.++|.+|++.|++..-+..+.-|..|-+++.-
T Consensus 14 HPDKicDqISDailD~~l~~Dp~arVA~Et~v~~ 47 (110)
T d2p02a1 14 HPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 47 (110)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEET
T ss_pred CCcHHHHHHHhHHHHHHHhhCcccceeEEEEecC
Confidence 4567888999999999888788889888887753
No 5
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=30.66 E-value=21 Score=19.74 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=11.5
Q ss_pred CCCCHHHHHHHHHHHHHhhhC
Q psy2601 29 SKFAVDEISCIIKEAIEDCIG 49 (132)
Q Consensus 29 ~~F~~~~v~~ii~~vl~~~L~ 49 (132)
..++.++++.+++.+++..+.
T Consensus 15 ~~Ls~~E~~~~~~~i~~g~~~ 35 (70)
T d2tpta1 15 HALSDEEIRFFINGIRDNTIS 35 (70)
T ss_dssp CCCCHHHHHHHHHHHHHTCSC
T ss_pred CCcCHHHHHHHHHHHHcCCch
Confidence 455556666666555554443
No 6
>d1ei1a1 d.14.1.3 (A:221-392) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=30.21 E-value=26 Score=23.20 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=33.8
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHHhhhCC-CCcCchhHHHHHHHHHHHHHHHH
Q psy2601 19 TAAPGGTTEDSKFAVDEISCIIKEAIEDCIGG-NTYNSAKVSTYVSQVVETIMANL 73 (132)
Q Consensus 19 nty~~~p~~~~~F~~~~v~~ii~~vl~~~L~~-~~Y~~~~~~~~~~~I~~~I~~~l 73 (132)
|.|..+. +.+.-..+|+.+++.++.+.|.. -.=+++.+..+...+...-+.|+
T Consensus 110 PqFeGQT--K~KL~n~~v~~~v~~~v~~~l~~~l~~np~~a~~I~~k~~~~~~aR~ 163 (172)
T d1ei1a1 110 PKFSSQT--KDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARARE 163 (172)
T ss_dssp CCBSSTT--CCSBCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccc--cceecChhhhhHHhHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 4444443 67777888888888888888865 23455666666666555444443
No 7
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=30.05 E-value=54 Score=19.78 Aligned_cols=33 Identities=9% Similarity=0.211 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCceEEEEEEEE
Q psy2601 57 KVSTYVSQVVETIMANLIKLDKPFKYVVNGTVM 89 (132)
Q Consensus 57 ~~~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~ 89 (132)
.-.++|.+|++.|++..-...+.-|..|-+++.
T Consensus 14 HPDKicDqISDaIlD~~L~~Dp~sRVA~Et~~~ 46 (102)
T d1mxaa1 14 HPDKIADQISDAVLDAILEQDPKARVACETYVK 46 (102)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCccceEEEEEEc
Confidence 456788999999999988777788999988884
No 8
>d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
Probab=29.39 E-value=40 Score=20.91 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhhCCCCcCchhHHHHHHH---HHHHHHHHHhcc
Q psy2601 34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVSQ---VVETIMANLIKL 76 (132)
Q Consensus 34 ~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~---I~~~I~~~lk~l 76 (132)
+.+.+++-++|.+.|++ .++++....|.+- |++.+..+.+++
T Consensus 105 ~~~~~~ll~~l~~~lg~-~~t~~~~~AW~k~~~~i~~~l~~~y~e~ 149 (151)
T d1a6ma_ 105 EFISEAIIHVLHSRHPG-DFGADAQGAMNKALELFRKDIAAKYKEL 149 (151)
T ss_dssp HHHHHHHHHHHHHHCGG-GCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCc-cCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 56777777888888865 4888888888754 455666666654
No 9
>d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]}
Probab=27.73 E-value=48 Score=20.28 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHH---HHHHHHHHHhc
Q psy2601 32 AVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQ---VVETIMANLIK 75 (132)
Q Consensus 32 ~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~---I~~~I~~~lk~ 75 (132)
.-+.+..++-++|.+.|++ .|+++....|.+- |++.|+..|++
T Consensus 106 ~f~~~~~~l~~~i~~~lg~-~~~~e~~~AW~~~~~~i~~~~~~~~~~ 151 (153)
T d2gdma_ 106 HFPVVKEAILKTIKEVVGA-KWSEELNSAWTIAYDELAIVIKKEMDD 151 (153)
T ss_dssp GHHHHHHHHHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCc-cCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3456777888888888876 5888888888764 45566665543
No 10
>d1d8ua_ a.1.1.2 (A:) Non-symbiotic plant hemoglobin {Rice (Oryza sativa) [TaxId: 4530]}
Probab=27.18 E-value=63 Score=20.01 Aligned_cols=42 Identities=12% Similarity=0.260 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHH---HHHHHHHHh
Q psy2601 33 VDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQV---VETIMANLI 74 (132)
Q Consensus 33 ~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I---~~~I~~~lk 74 (132)
-+.+..++-++|.+.|++..|+++....|.+-+ ++.|+..++
T Consensus 118 f~~~~~~li~~l~~~l~~~~~t~e~~~AW~~~~~~i~~~i~~g~~ 162 (165)
T d1d8ua_ 118 FEVVKFALLDTIKEEVPADMWSPAMKSAWSEAYDHLVAAIKQEMK 162 (165)
T ss_dssp HHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355667777888888988889998888888765 444444443
No 11
>d2ia7a1 d.373.1.1 (A:23-133) Uncharacterized protein GSU0986 {Geobacter sulfurreducens [TaxId: 35554]}
Probab=26.42 E-value=61 Score=19.21 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhhhCCCCcCchhH------------HHHHHHHHHHHHHHHhccCCCceEEEEEEEEEeC-C-cceee
Q psy2601 33 VDEISCIIKEAIEDCIGGNTYNSAKV------------STYVSQVVETIMANLIKLDKPFKYVVNGTVMQKL-G-AGLHT 98 (132)
Q Consensus 33 ~~~v~~ii~~vl~~~L~~~~Y~~~~~------------~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~qk~-g-qgi~~ 98 (132)
.+.|++-|+..|....+.+.++++-. ..+...|.+.|++.+.+.-+|.+.. .+.+.... + ..+++
T Consensus 8 ee~I~q~i~nll~T~~GEr~~~p~fG~~l~~llFe~~~~~~~~~i~~~I~~aI~~~ePRi~~~-~V~v~~~~~d~~~l~v 86 (111)
T d2ia7a1 8 EEDIAESIRIILGTARGERVMRPDFGCGIHDRVFSVINTTTLGLIENEVKEALILWEPRIELL-SVTASPREAAEGRLLI 86 (111)
T ss_dssp HHHHHHHHHHHHTCCTTSSTTCTTCSCGGGGCCCSCCCHHHHHHHHHHHHHHHHHHCTTEEEE-EEEEECTTGGGTEEEE
T ss_pred HHHHHHHHHHHhCCCCCccccCCccccEechhhhhhcchhHHHHHHHHHHHHHHHhCCceEEE-EEEEEecCCCCCEEEE
Confidence 46677777777777777665554443 5566677778888887777888765 67766432 3 34666
Q ss_pred eeeeeec
Q psy2601 99 SSSCLWD 105 (132)
Q Consensus 99 as~~lWD 105 (132)
.-.+.+.
T Consensus 87 ~I~y~i~ 93 (111)
T d2ia7a1 87 DIEYRVR 93 (111)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 6555554
No 12
>d1t33a2 a.121.1.1 (A:89-220) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=26.17 E-value=42 Score=21.02 Aligned_cols=38 Identities=24% Similarity=0.105 Sum_probs=28.6
Q ss_pred HHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhcc
Q psy2601 39 IIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKL 76 (132)
Q Consensus 39 ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l 76 (132)
+.++++...++-..+++.++.++...|.+.+.--|..|
T Consensus 93 var~~~l~~lgw~~~~~~~~~~i~~~i~~~~~~lL~GL 130 (132)
T d1t33a2 93 LGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGL 130 (132)
T ss_dssp HTHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 44556667778889999999999999987776555443
No 13
>d1ny721 b.121.4.2 (2:1-182) Comovirus coat proteins (VP37 and VP23) {CPMV (Cowpea mosaic virus) [TaxId: 12264]}
Probab=23.86 E-value=27 Score=23.56 Aligned_cols=48 Identities=10% Similarity=0.195 Sum_probs=36.6
Q ss_pred HHHHhccCCCceEEEEEEEEEeCCcceeeee-------------------eeeecCCCCCeEEEEEE
Q psy2601 70 MANLIKLDKPFKYVVNGTVMQKLGAGLHTSS-------------------SCLWDDNTDGSCTVRWE 117 (132)
Q Consensus 70 ~~~lk~l~~ryK~vV~v~I~qk~gqgi~~as-------------------~~lWD~~~D~~~~~~~~ 117 (132)
+.+.+.....-|.+.++-|-++.|-|+-++- +-+|||..-..+...|.
T Consensus 62 l~rth~i~gki~~~at~nvp~ntG~~Lai~yNS~vrGk~s~d~Yt~sSq~~~~WNPAc~~~~~f~fn 128 (182)
T d1ny721 62 FLRTHVITGKIKVTATTNISDNSGCCLMLAINSGVRGKYSTDVYTICSQDSMTWNPGCKKNFSFTFN 128 (182)
T ss_dssp HHHCSSBCSEEEEEEECCCCTTCCCEEEEEEESEECSSCCCCHHHHTTSEEEEECTTTCSEEEEEEC
T ss_pred hhhheeccceEEEEEEeCCCCCCceEEEEEeccccccceeeceeeccccceeeEcccccceeEEEec
Confidence 4455555566777777777788887776654 56899999999999987
No 14
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.13 E-value=47 Score=18.06 Aligned_cols=20 Identities=5% Similarity=0.263 Sum_probs=9.9
Q ss_pred CCCCHHHHHHHHHHHHHhhh
Q psy2601 29 SKFAVDEISCIIKEAIEDCI 48 (132)
Q Consensus 29 ~~F~~~~v~~ii~~vl~~~L 48 (132)
.....++++.++++++...+
T Consensus 15 ~~Ls~~E~~~~~~~i~~g~~ 34 (68)
T d1uoua1 15 GRLSEADIRGFVAAVVNGSA 34 (68)
T ss_dssp CCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHHcCCC
Confidence 34455555555555554433
No 15
>d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]}
Probab=22.98 E-value=31 Score=25.88 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhc
Q psy2601 29 SKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIK 75 (132)
Q Consensus 29 ~~F~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~ 75 (132)
..++.++-+++|+++|.-.+.+--=.|+++..+.++++.-|-..|..
T Consensus 309 ~~l~~~Ek~~Li~EvL~P~~~~l~VTPKeID~~I~~~s~iIs~giN~ 355 (371)
T d1c8ba_ 309 GTLPDEEKRRLIHEVLAPLGHNLMVTPKEVDMFIEDMANVVAGGLNA 355 (371)
T ss_dssp SSCCCTTHHHHHHHHTCSSCTTEEEEETTHHHHHHHHHHHHHHHHGG
T ss_pred hccCHHHHHHHHHHHhCccCCcceeCcHhHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999988887777888888888888877777774
No 16
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}
Probab=21.88 E-value=46 Score=17.98 Aligned_cols=37 Identities=3% Similarity=0.275 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHhhhCC-CCcC-chhHHHHHHHHHHH
Q psy2601 32 AVDEISCIIKEAIEDCIGG-NTYN-SAKVSTYVSQVVET 68 (132)
Q Consensus 32 ~~~~v~~ii~~vl~~~L~~-~~Y~-~~~~~~~~~~I~~~ 68 (132)
+++..++++++++-+.++. ..|+ ......|.-.|+..
T Consensus 30 d~~~aeDivQd~f~~~~~~~~~~~~~~~~~~wl~~i~~n 68 (75)
T d1h3la_ 30 NPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTN 68 (75)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGCCSSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHH
Confidence 5788899999999888876 3554 36778888877654
No 17
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=21.56 E-value=30 Score=21.28 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q psy2601 56 AKVSTYVSQVVETIMANLI 74 (132)
Q Consensus 56 ~~~~~~~~~I~~~I~~~lk 74 (132)
.++.+|.++|++.++.+++
T Consensus 133 ~~~~e~g~~i~~~lk~k~~ 151 (152)
T d1e5da1 133 EQLKTMAQTIARALKAKLA 151 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 3566788888888877765
No 18
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.57 E-value=56 Score=21.22 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhccC--CCceEEEEEEEEEeCCc
Q psy2601 61 YVSQVVETIMANLIKLD--KPFKYVVNGTVMQKLGA 94 (132)
Q Consensus 61 ~~~~I~~~I~~~lk~l~--~ryK~vV~v~I~qk~gq 94 (132)
-...+.+..++++++|. +++|| |.|.++.|.
T Consensus 122 ~i~~v~~~~~~r~~~l~~~~~i~y---V~iF~N~G~ 154 (173)
T d1z84a1 122 GIGDILIAYKKRINQIAQHDSINY---IQVFKNQGA 154 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCE---EEEEEEESG
T ss_pred HHHHHHHHHHHHHHHHHcCCCceE---EEEEeecCc
Confidence 34456666778888887 67888 578888774
Done!