RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2603
         (178 letters)



>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
           melanogaster) [TaxId: 7227]}
          Length = 571

 Score = 49.4 bits (116), Expect = 4e-08
 Identities = 23/96 (23%), Positives = 39/96 (40%)

Query: 64  ANGPNSGPPLDPGEHRVLGVHYFNTLPYFLLFPGFLNTNTDVHMRLPSNYGLMDQIAALH 123
           A        +      V+   +   +  F          ++     P N GL DQ  A+ 
Sbjct: 155 ATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214

Query: 124 WIQENIGYFNGDPSNVTLVGHGTGAACVNFLMISPA 159
           W+++N   F G+P  +TL G   G++ VN  ++SP 
Sbjct: 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPV 250


>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 542

 Score = 44.3 bits (103), Expect = 2e-06
 Identities = 33/136 (24%), Positives = 48/136 (35%), Gaps = 4/136 (2%)

Query: 42  CL-LFVVSQHGHRRAHAPP---FQLRANGPNSGPPLDPGEHRVLGVHYFNTLPYFLLFPG 97
           CL L V + +    +  P             +          +  V     +        
Sbjct: 96  CLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGT 155

Query: 98  FLNTNTDVHMRLPSNYGLMDQIAALHWIQENIGYFNGDPSNVTLVGHGTGAACVNFLMIS 157
           F           P N GL+DQ  AL W+QENI  F GDP +VTL G   GAA V   ++S
Sbjct: 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILS 215

Query: 158 PAVPDGLIKGIRNNCS 173
                   + +  + +
Sbjct: 216 LPSRSLFHRAVLQSGT 231


>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
           carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 532

 Score = 42.4 bits (98), Expect = 1e-05
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 64  ANGPNSGPPLDPGEHRVLGVHYFNTLPYFLLFPGFLNTNTDVHMRLPSNYGLMDQIAALH 123
                +    D             T+ Y L   GF +T          N+G +DQ+AAL 
Sbjct: 123 GLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTG---DEHSRGNWGHLDQVAALR 179

Query: 124 WIQENIGYFNGDPSNVTLVGHGTGAACVNFLMISPAVPDGLIKGIRNNC 172
           W+Q+NI  F G+P +VT+ G   G   V+ L++SP   +   + I  + 
Sbjct: 180 WVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 228


>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
           5061]}
          Length = 517

 Score = 40.9 bits (94), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query: 112 NYGLMDQIAALHWIQENIGYFNGDPSNVTLVGHGTGAACVNFLMISP 158
           N GL+DQ  AL W+++ I  F GDP ++ + G   GA  V + + + 
Sbjct: 156 NAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAY 202


>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
           esterase) {Bacillus subtilis [TaxId: 1423]}
          Length = 483

 Score = 40.5 bits (93), Expect = 5e-05
 Identities = 25/69 (36%), Positives = 33/69 (47%)

Query: 90  PYFLLFPGFLNTNTDVHMRLPSNYGLMDQIAALHWIQENIGYFNGDPSNVTLVGHGTGAA 149
             + L P      +        N GL+DQ AAL W++ENI  F GDP NVT+ G   G  
Sbjct: 133 LNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGM 192

Query: 150 CVNFLMISP 158
            +  L+  P
Sbjct: 193 SIAALLAMP 201


>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
           (Torpedo californica) [TaxId: 7787]}
          Length = 532

 Score = 40.1 bits (92), Expect = 7e-05
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 67  PNSGPPLDPGEHRVLGVHYFNTLPYFLLFPGFLNTNTDVHMRLPSNYGLMDQIAALHWIQ 126
            +S   +  G++             + +               P N GL+DQ  AL W+ 
Sbjct: 120 GSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFG-FLALHGSQEAPGNVGLLDQRMALQWVH 178

Query: 127 ENIGYFNGDPSNVTLVGHGTGAACVNFLMISPAVPDGLIKGIRNNC 172
           +NI +F GDP  VT+ G   G A V   ++SP   D   + I  + 
Sbjct: 179 DNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSG 224


>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus
           [TaxId: 1280]}
          Length = 246

 Score = 26.1 bits (56), Expect = 2.3
 Identities = 10/66 (15%), Positives = 21/66 (31%)

Query: 49  QHGHRRAHAPPFQLRANGPNSGPPLDPGEHRVLGVHYFNTLPYFLLFPGFLNTNTDVHMR 108
           Q      +   +       NSG  +   +  ++G+H      + L    F N        
Sbjct: 166 QSQIEMFNDSQYFGYTEVGNSGSGIFNLKGELIGIHSGKGGQHNLPIGVFFNRKISSLYS 225

Query: 109 LPSNYG 114
           + + +G
Sbjct: 226 VDNTFG 231


>d3pvia_ c.52.1.6 (A:) Restriction endonuclease PvuII {Proteus
           vulgaris [TaxId: 585]}
          Length = 156

 Score = 24.9 bits (54), Expect = 4.5
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 3/27 (11%)

Query: 2   EEWKTKPGR---LPKIPIPYPFEYGSK 25
            +W +   +    PKIP+ Y  E+G+K
Sbjct: 128 RKWYSDGHKDINNPKIPVKYVMEHGTK 154


>d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase
           {Haemophilus influenzae [TaxId: 727]}
          Length = 357

 Score = 25.1 bits (54), Expect = 4.9
 Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 1/40 (2%)

Query: 127 ENIGYFNGDPSNVTLVGHG-TGAACVNFLMISPAVPDGLI 165
           +  G  N + +N  L+ H  TG A   F           +
Sbjct: 29  QTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFM 68


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.140    0.454 

Gapped
Lambda     K      H
   0.267   0.0584    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 703,373
Number of extensions: 30941
Number of successful extensions: 88
Number of sequences better than 10.0: 1
Number of HSP's gapped: 88
Number of HSP's successfully gapped: 13
Length of query: 178
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 98
Effective length of database: 1,309,196
Effective search space: 128301208
Effective search space used: 128301208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.4 bits)