RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2604
(189 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 241 bits (617), Expect = 6e-79
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
++ +E++++ G + + + E L +++YL +VLKESLRLYP R LE++ ++
Sbjct: 277 VARLQAEVDEVIGSK--RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDG 334
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
+P + + +Y+M R + DP F+P+RF + F Y PFS G R+CIGQ
Sbjct: 335 VRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP--KPRFTYFPFSLGHRSCIGQ 392
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPR 185
+FA ME KV++ +LL++ F V + L+PL+ ++ + PR
Sbjct: 393 QFAQMEVKVVMAKLLQRLEFRLVPGQ-RFGLQEQATLKPLD-PVLCTLRPR 441
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 231 bits (592), Expect = 9e-75
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
++ ++ EI+ + G +DI+ + ++K++ +E + ES+R P V + R +D V+
Sbjct: 329 EEAIIKEIQTVIGE---RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDG 385
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
Y + +NI + MHR E +P P +F E F+K + PF GPR C G+
Sbjct: 386 YPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKN----VPYRYFQPFGFGPRGCAGK 440
Query: 135 RFAMMEEKVILTQLLRKFRFEAVS--SPDQVKCIPYVVLRPLNSE--LMVRITPRRNAE 189
AM+ K IL LLR+F + + + ++ I + L P ++ L + TPR +
Sbjct: 441 YIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSDR 499
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 227 bits (580), Expect = 3e-73
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
D++ E+E + G + + E ++K+ + V+ E++RL P+V ++R + LG
Sbjct: 297 ADRIRDEVEAVTGGR---PVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGG 353
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
Y IPA ++I Y + R P+ Y D +FDP+R+ E +A +A PFSAG R C
Sbjct: 354 YRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSD 413
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPRRNAE 189
F+M + +I L K+RFE V+ + + LRP + L+VR R +
Sbjct: 414 HFSMAQLTLITAALATKYRFEQVAGSN-DAVRVGITLRPHD--LLVRPVARHHHH 465
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 217 bits (555), Expect = 1e-69
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
Q K E + + G + + LK + L++ +KE+LRL P + + R +
Sbjct: 286 QKKCYLEQKTVCGENL-PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAG 344
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
YTIP + + + R + + + F+P+R+ ++N A FAY+PF AG CIG+
Sbjct: 345 YTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGE 404
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPR 185
FA ++ K I + +LR + F+ + ++ P N ++R R
Sbjct: 405 NFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPEN--PVIRYKRR 453
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 214 bits (548), Expect = 2e-68
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVL-G 73
K E + + +K+++Y+ VL E+LRL+P+ P S + ++D VL G
Sbjct: 287 LQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYP-DPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCI 132
EY + + ++ +HR ++ D E+F PERF EN + A+ PF G R CI
Sbjct: 344 EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACI 401
Query: 133 GQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPRR 186
GQ+FA+ E ++L +L+ F FE ++ ++ + L+P +V+ ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFEDHTNY-ELDIKETLTLKPEG--FVVKAKSKK 452
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 210 bits (536), Expect = 6e-67
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
+ + EIE+ + +M + E+ +ES+R P + + R + D+ +G
Sbjct: 289 LEALRKEIEEFPAQLN----YNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGS 344
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
Y +P I L H E +P+P ++DPER + A+I F AG CIGQ
Sbjct: 345 YVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE------KVEGAFIGFGAGVHKCIGQ 398
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPRR 186
+F +++ K IL R + F+ + +V+ P S+ V+ R+
Sbjct: 399 KFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK 450
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 202 bits (516), Expect = 9e-64
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
V+ E+++++G + L+++ LE VLKE+LRL+P + + R + + +
Sbjct: 279 YAAVIDELDELYGDGR--SVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSA-GRHPFAYIPFSAGPRNCIG 133
+ I + + +R PE +PDP F P R+ + + + +IPF AG C+G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCI-PYVVLRPLNSELMVRITPR 185
FA+M+ K I + LLR++ FE P+ + +V++ VR R
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQ-PAAVRYRRR 448
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 198 bits (506), Expect = 5e-62
Identities = 55/171 (32%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
Q +++ E++ + + R E L+ M YL+ LKES+RL PSVP+ +R L++ VLGE
Sbjct: 317 QRRLLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGE 374
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
Y +P + + + + ++ S + + D KF PER+ ++ +PFA++PF G R CIG+
Sbjct: 375 YALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-INPFAHLPFGIGKRMCIGR 433
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPR 185
R A ++ + L +++K+ A + V+ + +L P + EL + PR
Sbjct: 434 RLAELQLHLALCWIIQKYDIVATDNEP-VEMLHLGILVP-SRELPIAFRPR 482
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 195 bits (497), Expect = 1e-60
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
QD + +E+ + + L+ + L+ +KE+LRL+P + R+L DLVL +
Sbjct: 309 QDMLRAEVLAARH--QAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRD 366
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
Y IPA++ + + Y + R P + DPE FDP R+ ++ F + F G R C+G+
Sbjct: 367 YMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI-TYFRNLGFGWGVRQCLGR 425
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPR 185
R A +E + L +L FR E + V ++L P + P
Sbjct: 426 RIAELEMTIFLINMLENFRVE-IQHLSDVGTTFNLILMP-EKPISFTFWPF 474
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 188 bits (479), Expect = 5e-58
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
Q K+ EI+ + + + +MEYL+ V+ E+LRL+P + R ++D+ +
Sbjct: 306 QQKLQEEIDAVL--PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING 363
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
IP + I SY +HR P+ + +PEKF PERFSK+N P+ Y PF +GPRNCIG
Sbjct: 364 MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGM 423
Query: 135 RFAMMEEKVILTQLLRKFRFEAVS-SPDQVKCIPYVVLRPLNSELMVRITPRRN 187
RFA+M K+ L ++L+ F F+ + +K +L+P +++++ R
Sbjct: 424 RFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEK-PVVLKVESRDG 476
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 186 bits (474), Expect = 1e-57
Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 16/157 (10%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVL-- 72
++ EI ++ E +++M + V+ ESLR+ P VP + + +
Sbjct: 300 HTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIES 359
Query: 73 --GEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGP-- 128
+ + + + P+++ PE++ P+RF + Y+ +S GP
Sbjct: 360 HDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG---EALLKYVWWSNGPET 416
Query: 129 -------RNCIGQRFAMMEEKVILTQLLRKFRFEAVS 158
+ C G+ F ++ ++ + +L R++ +
Sbjct: 417 ESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE 453
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 185 bits (472), Expect = 2e-57
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
+++V E + +++ E LKKM YL++VL+E LRL P V R L QD
Sbjct: 277 RERVRQEQNKLQLS---QELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQG 333
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGR-HPFAYIPFSAGPRNCIG 133
+ P + H P+LYPDPEKFDPERF+ + SA PFA++PF G R C+G
Sbjct: 334 FHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLG 393
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITP 184
+ FA +E K+ T+L+++F + + + ++ + RP ++ L V++
Sbjct: 394 KEFARLEMKLFATRLIQQFDWTLLPGQN-LELVVTPSPRPKDN-LRVKLHS 442
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 182 bits (463), Expect = 1e-55
Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVL-- 72
+++ EI + ++ ++KME + V+ E LR P V ++DLV+
Sbjct: 318 HNRLAEEIRSVIKSNG-GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIES 376
Query: 73 --GEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPF------ 124
+ + A + L R P+++ ++F PERF E
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETET 436
Query: 125 -SAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVS 158
+ G + C G+ F ++ ++ + ++ R++ +
Sbjct: 437 PTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE 471
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 176 bits (448), Expect = 2e-54
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGE 74
Q +V E +E+LRLYP ++R LE+ L+LGE
Sbjct: 244 QKRVAESEEAALA--------------------AFQEALRLYPPAWILTRRLERPLLLGE 283
Query: 75 YTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIGQ 134
+P + + + Y+ R +PD E F PERF +E Y PF G R C+G+
Sbjct: 284 DRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEERG--TPSGRYFPFGLGQRLCLGR 339
Query: 135 RFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPRRNA 188
FA++E ++L R+FR + + P + V LRP L R A
Sbjct: 340 DFALLEGPIVLRAFFRRFRLDPLPFPRVL---AQVTLRPEGG-LPARPREEVRA 389
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 159 bits (404), Expect = 4e-47
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 27/196 (13%)
Query: 15 QDKVVSEIEDIFGPQECKDIRK-----EHLKKMEYLEKVLKESLRLYPSVPYISRWLEQD 69
V E+E I E + + L L+ VL ESLRL P+I+R + D
Sbjct: 296 LAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVD 354
Query: 70 LVL-----GEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFSKENS---------A 114
L + E+ + + + +L R PE+Y DPE F RF +
Sbjct: 355 LAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDG 414
Query: 115 GRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY-----V 169
R +P+ AG +C+G+ +A+ K + +L E +++ ++
Sbjct: 415 KRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFG 474
Query: 170 VLRPLNSELMVRITPR 185
+++P + ++ VR R
Sbjct: 475 LMQPEH-DVPVRYRIR 489
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 159 bits (404), Expect = 5e-47
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 28/201 (13%)
Query: 15 QDKVVSEIEDIFGPQECKDIRK--------EHLKKMEYLEKVLKESLRLYPSVPYISRWL 66
E++ K + L + L+ ++KESLRL + R
Sbjct: 291 MKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASL-NIRTA 349
Query: 67 EQDLVL----GEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRH----- 117
++D L G Y I I + LMH PE+YPDP F +R+ EN +
Sbjct: 350 KEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCN 409
Query: 118 ----PFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY----- 168
+ Y+PF +G C G+ FA+ E K L +L F E + + +
Sbjct: 410 GLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGL 469
Query: 169 VVLRPLNSELMVRITPRRNAE 189
+L PLN ++ + + +
Sbjct: 470 GILPPLN-DIEFKYKFKHHHH 489
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 157 bits (400), Expect = 5e-47
Identities = 39/164 (23%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 28 PQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMS 87
Q C IR +++ +Y E ++E R YP P + QD P + +
Sbjct: 257 LQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDL 316
Query: 88 YLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGP----RNCIGQRFAMMEEKV 143
Y + + DP++F PERF F +IP G C G+ + KV
Sbjct: 317 YGSNHDAATWADPQEFRPERFRAW---DEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 373
Query: 144 ILTQLLRKFRFEAVSSPDQVKCIPY--VVLRPLNSELMVRITPR 185
L+ R++ PDQ I + + P S ++R
Sbjct: 374 AAHLLVNAMRYDV---PDQDLSIDFARLPALP-KSGFVMRNVHI 413
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 154 bits (391), Expect = 9e-46
Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 12/164 (7%)
Query: 28 PQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMS 87
P+ + +R E ++E R YP P++ +++D V +++ +
Sbjct: 262 PKYKEWLRSG---NSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDL 318
Query: 88 YLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGP----RNCIGQRFAMMEEKV 143
Y + P L+ P++F PERF++ + F IP G C G+ + K
Sbjct: 319 YGTNHDPRLWDHPDEFRPERFAER---EENLFDMIPQGGGHAEKGHRCPGEGITIEVMKA 375
Query: 144 ILTQLLRKFRFEAVSSPDQVKCIPYVVLRPLNSELMVRITPRRN 187
L L+ + ++ V + + P S ++ R++
Sbjct: 376 SLDFLVHQIEYD-VPEQSLHYSLARMPSLP-ESGFVMSGIRRKS 417
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 127 bits (322), Expect = 3e-35
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 27/191 (14%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQDLVL-- 72
V EI+ +E K + VL E+LRL + I+R + QD +
Sbjct: 287 LRAVREEIQGGKHL-----RLEERQKNTPVFDSVLWETLRLTAAAL-ITRDVTQDKKICL 340
Query: 73 ---GEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFSKEN---------SAGRHPF 119
EY + + + ++ P+++ PE F +RF + + R +
Sbjct: 341 SNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKY 400
Query: 120 AYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY-----VVLRPL 174
+P+ C G+ FA+ K ++ +L +F E V + +L+P
Sbjct: 401 PSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPA 460
Query: 175 NSELMVRITPR 185
+L +R R
Sbjct: 461 G-DLEIRYRIR 470
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 107 bits (269), Expect = 8e-28
Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
Q +V EI+ I GP + KM Y E VL E LR VP I +D V+
Sbjct: 307 QGQVQKEIDLIMGPN--GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVR 364
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
Y+IP + + Y +H + + DPE F PERF + A +PFS G R+C+G
Sbjct: 365 GYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLG 424
Query: 134 QRFAMMEEKVILTQLLRKFRFEA-VSSPDQVKCIPYVVLRPLNSELMVRITPRRNAE 189
+ A ME + T LL++F +K + L+P + R +
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLI--CAERRHHHH 479
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 106 bits (268), Expect = 1e-27
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
Q +V EI+D+ G + M Y V+ E R VP ++ +D+ +
Sbjct: 306 QRRVQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQ 363
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
+ IP + + + + ++ P +F PE F P A++PFSAG R C+G
Sbjct: 364 GFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLG 423
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSPDQV--KCIPYVVLRPLNSELMVRITPRRN 187
+ A ME + T LL+ F F + + + ++ P EL PR +
Sbjct: 424 EPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYEL--CAVPRHH 477
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 102 bits (257), Expect = 4e-26
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
Q +V +E++ + G + Y+ L E++R VP I + +
Sbjct: 313 QTRVQAELDQVVGRDRL--PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVL 370
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGR--HPFAYIPFSAGPRNC 131
Y IP + + + + ++ P +P+PE FDP RF ++ + FS G R C
Sbjct: 371 GYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRC 430
Query: 132 IGQRFAMMEEKVILTQLLRKFRFEAV-SSPDQVKCIPYVVLRPLNSELMVRITPRRNAE 189
IG+ + M+ + ++ L + F A + P ++ + ++P + + V +T R + E
Sbjct: 431 IGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKSFK--VNVTLRESME 487
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 101 bits (255), Expect = 9e-26
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
+ K+ EI+ G + ++ LE ++E LRL P P I D +G
Sbjct: 307 KKKLYEEIDQNVGFS--RTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIG 364
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERF--SKENSAGRHPFAYIPFSAGPRNC 131
E+ + + + I + +H + + + P++F PERF +Y+PF AGPR+C
Sbjct: 365 EFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSC 424
Query: 132 IGQRFAMMEEKVILTQLLRKFRFEAV--SSPDQVKCIPYVVLRPLNSELMVRITPRRNAE 189
IG+ A E +I+ LL++F E ++ IP VV + + V+I R+
Sbjct: 425 IGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFK--VKIKVRQAWR 482
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 101 bits (254), Expect = 1e-25
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 12/177 (6%)
Query: 15 QDKVVSEIEDIFGPQECKDI-RKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVL 72
Q ++ E++ GP + ++ L + E LRL P VP + + +
Sbjct: 313 QRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI 372
Query: 73 GEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCI 132
Y IP + H ++ P +F P+RF + + + F G R C+
Sbjct: 373 FGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG--AN--PSALAFGCGARVCL 428
Query: 133 GQRFAMMEEKVILTQLLRKFRF---EAVSSPD-QVKCIPYVVLRPLNSELMVRITPR 185
G+ A +E V+L +LL+ F + P Q V L+ + VR+ PR
Sbjct: 429 GESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQ--VRLQPR 483
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 100 bits (252), Expect = 3e-25
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 9/180 (5%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
Q K+ E++ + G + + R ++ YLE + E+ R +P+ I +D L
Sbjct: 316 QRKIQKELDTVIGRE--RRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLN 373
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGR---HPFAYIPFSAGPRN 130
+ IP + + + + ++ PEL+ DP +F PERF + + F G R
Sbjct: 374 GFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRR 433
Query: 131 CIGQRFAMMEEKVILTQLLRKFRFEAVSSPD-QVKCIPYVVLRPLNSELMVRITPRRNAE 189
CIG+ A E + L LL++ F + I + ++ E R +
Sbjct: 434 CIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCE--HVQARRFSIN 491
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 99 bits (250), Expect = 4e-25
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
KV EIE + G + M Y + V+ E R +P + + D+
Sbjct: 303 TAKVQEEIERVIGRNRS--PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFR 360
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
Y IP + I I + + +P+PE FDP F E + ++PFSAG R C+G
Sbjct: 361 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVG 420
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSP---DQVKCIPYVVLRPLNSELMVRITPR 185
+ A ME + LT +L+ F +++ P D + P +L P
Sbjct: 421 EALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQL--CFIPI 473
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 99 bits (250), Expect = 4e-25
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
++K+ EI+ + GP + + ++M Y++ V+ E R VP + +D +
Sbjct: 301 EEKLHEEIDRVIGPS--RIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFR 358
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
Y IP + + + + +PDPEKF PE F EN ++ + PFS G R C G
Sbjct: 359 GYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAG 418
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY---VVLRPLNSELMVRITPR 185
+ A ME ++L +L+ F + + P + P P +L + PR
Sbjct: 419 EGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKL--CVIPR 471
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 98.8 bits (247), Expect = 1e-24
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
++V EIE + G + + KM Y + V+ E RL +P+ + + +D
Sbjct: 302 TERVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
Y IP + + + P + P F+P F N A + ++PFS G R C+G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 134 QRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV---VLRPLNSELMVRITPR 185
+ A E + T +L+ F + P+ + P P + ++ R R
Sbjct: 420 EGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQI--RFLAR 472
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 97.2 bits (243), Expect = 3e-24
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 15 QDKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPY-ISRWLEQDLVLG 73
+ KV EI+ + G + + E KM Y+E V+ E R +P ++R +++D
Sbjct: 302 EAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFR 359
Query: 74 EYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPFAYIPFSAGPRNCIG 133
++ +P + + M + R P + +P+ F+P+ F E + A++PFS G RNC G
Sbjct: 360 DFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFG 419
Query: 134 QRFAMMEEKVILTQLLRKFRF---EAVSSPDQVKCIPYVVLRPLNSELMVRITPR 185
+ A ME + T +++ FR ++ D P N + PR
Sbjct: 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTM--SFLPR 472
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 77.3 bits (191), Expect = 3e-17
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E++R P V +SR+ DL +G +T+P + ++ HR P + P++FDP+R
Sbjct: 295 ETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR--- 351
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVV 170
+ RH + F G C+G A +E V L L RF + + +
Sbjct: 352 --AQIRH----LGFGKGAHFCLGAPLARLEATVALPALAA--RFPEARLSGEPEYKRNLT 403
Query: 171 LRPLNSELMVRITPR 185
LR + S L + +
Sbjct: 404 LRGM-STLSIAVHHH 417
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 76.9 bits (190), Expect = 4e-17
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E LR +R +D+ + TI + ++ +R P ++ +P+ FD R
Sbjct: 273 ECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR--- 329
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVS-SPDQVKCIPYV 169
S H + F G C+G A +E ++ + LL+ R +++ + + + P
Sbjct: 330 --SPNPH----LSFGHGHHVCLGSSLARLEAQIAINTLLQ--RMPSLNLADFEWRYRPLF 381
Query: 170 VLRPLNSELMVRITPRR 186
R L EL V
Sbjct: 382 GFRAL-EELPVTFEASW 397
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 75.0 bits (185), Expect = 2e-16
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E +R P V ++RW +D+ LG++ IP S + + +R P +PDP+ D R
Sbjct: 293 ELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHR--- 349
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVS-SPDQVKCIPYV 169
+A R + F G C+G A E ++ L LL A+ +V+ +
Sbjct: 350 --AAERQ----VGFGLGIHYCLGATLARAEAEIGLRALLD--GIPALGRGAHEVEYADDM 401
Query: 170 VLRPLNSELMVRITPRRNAE 189
V + L++ +
Sbjct: 402 VFHGP-TRLLLDLPDAALEH 420
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 74.6 bits (184), Expect = 3e-16
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 10/134 (7%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E LR PSV +R L+ D+ L + + +++ +R P Y P+ FD ER
Sbjct: 272 ECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER--- 328
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVV 170
+ F AG R C+G A + + + L R + D + P +
Sbjct: 329 --DPVPS----MSFGAGMRYCLGSYLARTQLRAAVAALARLPGLRLGCASDALAYQPRTM 382
Query: 171 LRPLNSELMVRITP 184
R L + L + TP
Sbjct: 383 FRGL-ASLPIAFTP 395
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 74.6 bits (184), Expect = 3e-16
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 13/138 (9%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E LR V + R L D + A + ++ + + ++ +PEKFD +R
Sbjct: 269 EMLRWTAPVKNMCRVLTADTEFHGTALCAGEKM-MLLFESANFDEAVFCEPEKFDVQR-- 325
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPY 168
+ H + F G C+G + A +E ++ ++LR+ V+ + P
Sbjct: 326 ---NPNSH----LAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPA 378
Query: 169 VVLRPLNSELMVRITPRR 186
+ L + V TP
Sbjct: 379 NFVSGL-ESMPVVFTPSP 395
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 73.5 bits (181), Expect = 6e-16
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 14/136 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E LR ++ R D+ + +P+ + + + +R P + DP+ F P R
Sbjct: 293 EVLRWTSPAMHVLRVTTADVTINGRDLPSGTPV-VAWLPAANRDPAEFDDPDTFLPGR-- 349
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
RH I F G +C+G A +E V+L L R V + + +
Sbjct: 350 ---KPNRH----ITFGHGMHHCLGSALARIELSVVLRVLAE--RVSRVDLEREPAWLRAI 400
Query: 170 VLRPLNSELMVRITPR 185
V++ EL VR T R
Sbjct: 401 VVQGY-RELPVRFTGR 415
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 73.4 bits (181), Expect = 7e-16
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E +R+ P R+ +D+ +G I A S I +R PE++ DP+ FD R
Sbjct: 272 EMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPI-RFMIGAANRDPEVFDDPDVFDHTRPP 330
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+ R+ + F GP +C GQ + E + L R+E + ++
Sbjct: 331 AAS---RN----LSFGLGPHSCAGQIISRAEATTVFAVLAE--RYERIELAEEPTVAHND 381
Query: 170 VLRPLNSELMVRIT 183
R +L + ++
Sbjct: 382 FARRY-RKLPIVLS 394
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 73.1 bits (180), Expect = 9e-16
Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 13/139 (9%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFS 109
E LR + R+ QDL +I + ++ R ++ P+ FD R
Sbjct: 293 EVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR-- 350
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+ + GP C G A +E ++ + + R RF + + +
Sbjct: 351 ---DTSAS----LAYGRGPHVCPGVSLARLEAEIAVGTIFR--RFPEMKLKETPVFGYHP 401
Query: 170 VLRPLNSELMVRITPRRNA 188
R + L V + P +
Sbjct: 402 AFRNI-ESLNVILKPSKAG 419
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 73.1 bits (180), Expect = 1e-15
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 12/140 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E LR P P + R + + IPA + L +R + + DP++FDP R
Sbjct: 280 EVLRYRPPFPQMQRTTTKATEVAGVPIPADVMV-NTWVLSANRDSDAHDDPDRFDPSR-- 336
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPY 168
++ + F G C+G A +E +V L +++ +F R ++++
Sbjct: 337 -KSGGAAQ----LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERLRHFEQ 391
Query: 169 VVLRPLNSELMVRITPRRNA 188
+VL L V
Sbjct: 392 IVLGT--RHLPVLAGSSPRQ 409
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 72.4 bits (178), Expect = 2e-15
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPER--- 107
E+LR P V I R L QD V+G I + + M +R PE + P+ F+ R
Sbjct: 308 ETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDL 367
Query: 108 --FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKC 165
S + A RH + F +G NC+G FA E +++ +L K R + D
Sbjct: 368 GIKSAFSGAARH----LAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRL-EEDFCYA 422
Query: 166 IPYVVLRPLNSELMVRITP 184
+ R S L+V
Sbjct: 423 ESGLYTRGPVS-LLVAFDG 440
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 71.9 bits (177), Expect = 3e-15
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E++R V R +D+ L TI + +M +R P + DP+++D R
Sbjct: 290 EAVRFESPVQTFFRTTTRDVELAGATIGEGEKV-LMFLGSANRDPRRWDDPDRYDITR-- 346
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
H + F +G C+GQ A +E +V+L L R + A+ +K
Sbjct: 347 ---KTSGH----VGFGSGVHMCVGQLVARLEGEVVLAALAR--KVAAIEIAGPLKRRFNN 397
Query: 170 VLRPLNSELMVRITP 184
LR L L +++TP
Sbjct: 398 TLRGL-ESLPIQLTP 411
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 71.5 bits (176), Expect = 3e-15
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E+LR P V R ++ + LG+ TI + + +R E++ D EKF P+R
Sbjct: 246 EALRYSPPVMRTVRKTKERVKLGDQTIEEGEYV-RVWIASANRDEEVFHDGEKFIPDR-- 302
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+ H + F +G C+G A +E ++ + + ++FR + ++V P
Sbjct: 303 ---NPNPH----LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKV---PNE 352
Query: 170 VLRPLNSELMVRITPR 185
VL L+VR+
Sbjct: 353 VLNGY-KRLVVRLKSN 367
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 71.1 bits (175), Expect = 5e-15
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 12/141 (8%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFS 109
E LR V R+ +D+ TIPA + + +R + P+P++ D R
Sbjct: 275 EFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR-- 332
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPY 168
A + F G C+G + A +E +V + +L D++
Sbjct: 333 ---DASGG----VFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRES 385
Query: 169 VVLRPLNSELMVRITPRRNAE 189
++R L S + V + PR E
Sbjct: 386 TLVRGL-SRMPVTMGPRSALE 405
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 70.3 bits (173), Expect = 9e-15
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 15/135 (11%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E+LR P V R ++ + + + I + + +R E++ DP+ F P+R
Sbjct: 246 EALRFSPPVMRTIRVTKEKVKIRDQVIDEGELV-RVWIASANRDEEVFKDPDSFIPDR-- 302
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+ H + F +G C+G A +E ++ L + +KFR + + +++
Sbjct: 303 ---TPNPH----LSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKI---DNE 352
Query: 170 VLRPLNSELMVRITP 184
VL +L+VR+
Sbjct: 353 VLNGY-RKLVVRVER 366
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 70.3 bits (173), Expect = 9e-15
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E LR +I R ++D+ +G TI A + ++S + +R + Y +P+ FD R
Sbjct: 282 ELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAV-LVSITLMNRDAKAYENPDIFDARR-- 338
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPY 168
+A H + F G C+GQ A E ++ L L + D+V
Sbjct: 339 ---NARHH----VGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAG 391
Query: 169 VVLRPLNSELMVRITP 184
+ EL V
Sbjct: 392 HDAQGP-IELPVVWHH 406
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 70.3 bits (173), Expect = 1e-14
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E LR +R+ +++ +G IP S + + + +R P+ +PDP +FD R
Sbjct: 280 EILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--- 336
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPYV 169
H + F G C+G+ A +E +V L L +F D V +
Sbjct: 337 --DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSL 390
Query: 170 VLRPLNSELMVR 181
+LR + L VR
Sbjct: 391 LLRGI-DHLPVR 401
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 70.0 bits (172), Expect = 1e-14
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR V R+ + + L IPA + ++ HR+PE +PDP +FD R
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTV-LVVLADAHRTPERFPDPHRFDIRR- 359
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIP 167
H + F G CIG A +E ++ + LL + SP ++ P
Sbjct: 360 ----DTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYP 411
Query: 168 YVVLRPLNSELMVRITPRRNA 188
++R L L +R R A
Sbjct: 412 NPMIRGL-KALPIRWRRGREA 431
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 70.0 bits (172), Expect = 1e-14
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELY-PDPEKFDPERF 108
E LRL V ++R +D+ +G+ TIPA + ++ Y +R Y PD + D R
Sbjct: 289 ELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSANRDERQYGPDAAELDVTR- 346
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY 168
+ FS G +C+G A M+ +V LT+LL + V + ++
Sbjct: 347 ----CPRNI----LTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEV-AESRIVWSGG 397
Query: 169 VVLRPLNSELMVRITPRR 186
+R S + R+T R
Sbjct: 398 SYVRRPLS-VPFRVTSSR 414
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 69.3 bits (170), Expect = 2e-14
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 9/102 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E LRL+P++ R ++ LGE+ I + ++ +R PE++ +P++ D +R
Sbjct: 261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR--- 317
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF 152
+ + L +
Sbjct: 318 --PDADR----ALSAHRGHPGRLEELVTALATAALRAAAKAL 353
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 68.0 bits (167), Expect = 6e-14
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 12/135 (8%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFS 109
E LR P++P +R +D + IP + + + +++ HR P ++ D ++FD
Sbjct: 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV-- 349
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
I F GP C+G A +E + L R + ++ +
Sbjct: 350 --KREAPS----IAFGGGPHFCLGTALARLELTEAVAALAT--RLDPPQIAGEITWRHEL 401
Query: 170 VLRPLNSELMVRITP 184
+ L +R
Sbjct: 402 GVAGP-DALPLRFGA 415
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 67.3 bits (165), Expect = 1e-13
Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E R + + I R ++D+++G+ + A I I S +R E++ +P++F+ R
Sbjct: 279 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGI-IASNQSANRDEEVFENPDEFNMNR- 336
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIP 167
+ + F G CI + A E + + L +KF + ++ P
Sbjct: 337 --KWPPQDP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTP 390
Query: 168 YVVLRPLNSELMVR 181
+ +L V
Sbjct: 391 LNRDVGI-VDLPVI 403
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 66.9 bits (164), Expect = 1e-13
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 51 ESLRLYPSVPY--ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPER 107
E LR ++R +D+ + I A + +SYL +R P+++PDP++ D +R
Sbjct: 283 ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPV-YVSYLAANRDPDVFPDPDRIDLDR 341
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCI 166
H + + G C G A M+ ++++ LL + +QV
Sbjct: 342 -----DPNPH----LAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWR 392
Query: 167 PYVVLRPLNSELMVRITP 184
++R L
Sbjct: 393 RKTMIRGP-RTLPCTWHH 409
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 66.9 bits (164), Expect = 1e-13
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 15/135 (11%)
Query: 51 ESLRLYPSVPY--ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPER 107
E LR P +SR +D+ + I A + +SYL +R PE++PDP++ D ER
Sbjct: 280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAANRDPEVFPDPDRIDFER 338
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCI 166
S H + F GP C G A +E ++++ +L + + +P+ V
Sbjct: 339 -----SPNPH----VSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFK 389
Query: 167 PYVVLRPLNSELMVR 181
++R L V
Sbjct: 390 KGALIRGP-EALPVT 403
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 66.6 bits (163), Expect = 2e-13
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E++R V + R D L I A + +++Y+ + P +P+P KFDP R
Sbjct: 328 EAIRWTTPVQHFMRTAATDTELCGQKIAAGDWL-MLNYVAANHDPAQFPEPRKFDPTR-- 384
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
A RH + F AG C+G A +E +V+L LL R +++ + K +
Sbjct: 385 ---PANRH----LAFGAGSHQCLGLHLARLEMRVLLDVLLD--RVDSLELAGEPKRVNST 435
Query: 170 VLRPLNSELMVRITP 184
+ L +R
Sbjct: 436 FVGGF-KSLPMRWKA 449
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 65.7 bits (161), Expect = 4e-13
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFS 109
E LR R D+ + I A + +++ + +R +Y DP+ D R
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-- 340
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIPY 168
SA H + F G C+GQ A +E +VIL L+ + +Q+ P
Sbjct: 341 ---SARHH----LAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPG 393
Query: 169 VVLRPLNSELMVRITP 184
++ + +EL V
Sbjct: 394 TTIQGV-NELPVTWHH 408
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 65.7 bits (161), Expect = 4e-13
Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 15/141 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERFS 109
E LR Y + R + Q++ +G+ T+ ++ + + R + P+ ER
Sbjct: 271 ELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTA-MLWFPIASRDRSAFDSPDNIVIER-- 326
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+ RH + G C+G +E +V +T+ L++ ++ + + +
Sbjct: 327 ---TPNRH----LSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLMGQ 379
Query: 170 VLRPLNSELMVRITP-RRNAE 189
V + + +R +E
Sbjct: 380 VAGM--LHVPIIFPKGKRLSE 398
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 65.4 bits (160), Expect = 4e-13
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E R + V +R++ D+ + I + + L + DP D R
Sbjct: 295 ELFRRFAVVS-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR--- 350
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVS-SPDQVKCIPYV 169
H F+ GP C G A +E V+L + L R V
Sbjct: 351 --RDVTH----STFAQGPHRCAGMHLARLEVTVMLQEWLA--RIPEFRLKDRAVPIYHSG 402
Query: 170 VLRPLNSELMVRITPRR 186
++ + + + + P+R
Sbjct: 403 IVAAVEN-IPLEWEPQR 418
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 65.3 bits (160), Expect = 4e-13
Identities = 40/139 (28%), Positives = 54/139 (38%), Gaps = 18/139 (12%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR+ R +D+ L T+PA + I + PE + DPE+ D R
Sbjct: 288 ELLRVLSVADSIPLRVAAEDIELSGRTVPADDGV-IALLAGANHDPEQFDDPERVDFHR- 345
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVKC 165
+ H + F G C+GQ A +E +V L LLR+ R A DQV
Sbjct: 346 ----TDNHH----VAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRL-AG-ERDQVVV 395
Query: 166 IPYVVLRPLNSELMVRITP 184
L ELMV
Sbjct: 396 KHDSATFGL-EELMVTWHH 413
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 65.4 bits (160), Expect = 5e-13
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFS 109
E++R V R D + I I ++SY +R E++ +P++FD R
Sbjct: 306 EAVRWTAPVKSFMRTALADTEVRGQNIKRGDRI-MLSYPSANRDEEVFSNPDEFDITR-- 362
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
RH + F G C+GQ A +E K+ +LL + ++V + +
Sbjct: 363 ---FPNRH----LGFGWGAHMCLGQHLAKLEMKIFFEELLP--KLKSVELSGPPRLVATN 413
Query: 170 VLRPLNSELMVRITP 184
+ + +R T
Sbjct: 414 FVGGP-KNVPIRFTK 427
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 65.4 bits (160), Expect = 5e-13
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 18/136 (13%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E +R R +DL L I ++ I S +R P L PD ++ D R
Sbjct: 275 ELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSV-ICSLPAANRDPALAPDVDRLDVTR- 332
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVKC 165
H + F G +C+G A +E + + T+L R+F R A +
Sbjct: 333 ----EPIPH----VAFGHGVHHCLGAALARLELRTVFTELWRRFPALRL-AD-PAQDTEF 382
Query: 166 IPYVVLRPLNSELMVR 181
L +ELMV
Sbjct: 383 RLTTPAYGL-TELMVA 397
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 65.3 bits (160), Expect = 5e-13
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR + R +D+ LG I + + L P +PE+FD R
Sbjct: 276 ELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV-VAHVLAADFDPAFVEEPERFDITR- 333
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVKC 165
H + F G CIGQ+ A +E +++ L R+ R A ++++
Sbjct: 334 ----RPAPH----LAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRL-AK-PVEELRF 383
Query: 166 IPYVVLRPLNSELMVRITP 184
+V + EL V
Sbjct: 384 RHDMVFYGV-HELPVTWHH 401
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 65.3 bits (160), Expect = 5e-13
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR + SR +D+ +G +I A + I+S L + P ++ DP D ER
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGV-IVSMLSANWDPAVFKDPAVLDVER- 341
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVKC 165
A H + F GP C+GQ A ME +++ L R+ R AV + V
Sbjct: 342 ----GARHH----LAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRL-AV-PMEDVPF 391
Query: 166 IPYVVLRPLNSELMVR 181
V+ + EL V
Sbjct: 392 KGDSVIYGV-HELPVT 406
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 65.0 bits (159), Expect = 6e-13
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 17/139 (12%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFS 109
E +R V R +D L I + +M Y + E++ DP F+ R
Sbjct: 305 EIVRWATPVTAFQRTALRDYELSGVQIKKGQRV-VMFYRSANFDEEVFQDPFTFNILR-- 361
Query: 110 KENSAGRHPFAYIPFSA-GPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCIP 167
+ H + F G CIG A M +I + + +S+P+++
Sbjct: 362 ---NPNPH----VGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERL---R 411
Query: 168 YVVLRPLNSELMVRITPRR 186
L + V T R
Sbjct: 412 SGWLNGI-KHWQVDYTGRC 429
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 65.0 bits (159), Expect = 7e-13
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 51 ESLRLYPSVPY--ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPER 107
E R P R+ +D+ L TI A + + S +R +PD ++ D +R
Sbjct: 293 ELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPV-LASTGAANRDQAQFPDADRIDVDR 351
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCI 166
+ +H + F G +C+G A +E +V L LL++ Q++
Sbjct: 352 -----TPNQH----LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWS 402
Query: 167 PYVVLRPLNSELMVR 181
++LR EL V
Sbjct: 403 EGMLLRGP-LELPVV 416
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 64.2 bits (157), Expect = 1e-12
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 15/138 (10%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGE-YTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPER 107
E+LR P+V + R+ D+ L + TI I + SY +R P+ + D + FD R
Sbjct: 281 ETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPI-LASYAAANRHPDWHEDADTFDATR 339
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCI 166
+ H + F G C+G A ME + L L +F +++ +
Sbjct: 340 -----TVKEH----LAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPV 390
Query: 167 PYVVLRPLNSELMVRITP 184
P ++ L V +
Sbjct: 391 PSLISNGH-QRLPVLLHA 407
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 64.2 bits (157), Expect = 1e-12
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 17/136 (12%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR+ S + R D+ +G+ + + ++ + PE +P+P + +R
Sbjct: 272 ELLRINLSFADGLPRLATADIQVGDVLVRKGELV-LVLLEGANFDPEHFPNPGSIELDR- 329
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVKC 165
+ H + F G C G ++ + LL+K AV DQ+
Sbjct: 330 ---PNPTSH----LAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDL-AV-PIDQLVW 380
Query: 166 IPYVVLRPLNSELMVR 181
R L V
Sbjct: 381 RTRFQRRIP-ERLPVL 395
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 63.9 bits (156), Expect = 1e-12
Identities = 27/137 (19%), Positives = 43/137 (31%), Gaps = 14/137 (10%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E R V +R + +D + I + + L P+P K D R
Sbjct: 294 EMFR-RFPVVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR--- 349
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVS-SPDQVKCIPYV 169
+ H F GP C G A ME V L + L+ R S +
Sbjct: 350 --RSISH----STFGGGPHRCAGMHLARMEVIVTLEEWLK--RIPEFSFKEGETPIYHSG 401
Query: 170 VLRPLNSELMVRITPRR 186
++ + + + R
Sbjct: 402 IVAAV-ENVPLVWPIAR 417
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 63.4 bits (155), Expect = 2e-12
Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 19/137 (13%)
Query: 51 ESLRLYPSVPY--ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPER 107
E LR + R+ +D+ G TI A + + + + + PE+FD R
Sbjct: 280 EVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLV-LFDLGLPNFDERAFTGPEEFDAAR 338
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF---RFEAVSSPDQVK 164
+ H + F G +CIG A +E + + T+L + R + +Q++
Sbjct: 339 -----TPNPH----LTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRP-EL-PVEQLR 387
Query: 165 CIPYVVLRPLNSELMVR 181
+ +EL V
Sbjct: 388 LKEGQLSGGF-AELRVV 403
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 63.1 bits (154), Expect = 3e-12
Identities = 27/136 (19%), Positives = 40/136 (29%), Gaps = 12/136 (8%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E LR + V R L D + I + L P D R
Sbjct: 288 ELLRRFSLV-ADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR--- 343
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVV 170
H F G C+GQ A E V L + L + +++ Q++ +V
Sbjct: 344 --QKVSH----TTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIV 397
Query: 171 LRPLNSELMVRITPRR 186
L + P
Sbjct: 398 SGV--QALPLVWDPAT 411
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 63.0 bits (154), Expect = 3e-12
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E +R V R +D+V+ I A + + S LM +R L PDP+ D R
Sbjct: 284 ELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYV-LCSILMANRDEALTPDPDVLDANR- 341
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF 152
+A + F G C+G A ++ L R+F
Sbjct: 342 ----AAVSD----VGFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 62.7 bits (153), Expect = 4e-12
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFS 109
E +R + ++ R D LG TI + +M Y +R E+ PE+F +R
Sbjct: 304 EIIRWQTPLAHMRRTAIADSELGGKTIRKGDKV-VMWYYSGNRDDEVIDRPEEFIIDR-- 360
Query: 110 KENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYV 169
+H + F G C+G R A M+ +++ ++L RF + + + +
Sbjct: 361 --PRPRQH----LSFGFGIHRCVGNRLAEMQLRILWEEILT--RFSRIEVMAEPERVRSN 412
Query: 170 VLRPLNSELMVRIT 183
+R +++MVR+
Sbjct: 413 FVRGY-AKMMVRVH 425
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 62.2 bits (152), Expect = 5e-12
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELY-PDPEKFDPER 107
E+LR + + R+ +D+ +G+ IPA + I+SY R + P ++FD R
Sbjct: 281 ETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDAL-IVSYGALGRDERAHGPTADRFDLTR 339
Query: 108 FSKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVKCI 166
S RH I F GP C G + ME V L L +F + +++
Sbjct: 340 ----TSGNRH----ISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNK 391
Query: 167 PYVVLRPLNSELMVRITP 184
P V L EL VR+
Sbjct: 392 PVVTQNDL-FELPVRLAH 408
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 62.3 bits (152), Expect = 6e-12
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYL-MHRSPELYPDPEKFDPERFS 109
E +R V Y+ R L QD+ L + A + + Y +R + DP FD R
Sbjct: 314 EIVRWASPVVYMRRTLTQDIELRGTKMAAGDKV-SLWYCSANRDESKFADPWTFDLAR-- 370
Query: 110 KENSAGRHPFAYIPFS-AGPRNCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPY 168
+ H + F G C+G A E +V +L R + V + ++ +
Sbjct: 371 ---NPNPH----LGFGGGGAHFCLGANLARREIRVAFDELRR--QMPDVVATEEPARLLS 421
Query: 169 VVLRPLNSELMVRIT 183
+ + L V +
Sbjct: 422 QFIHGI-KTLPVTWS 435
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 61.8 bits (151), Expect = 6e-12
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 14/117 (11%)
Query: 51 ESLRLYPSVPYIS-RWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E+LR Y + ++ R+ +D + I + I+ +R + +P+ F R
Sbjct: 224 ETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQV-IVYLGSANRDETFFDEPDLFKIGR- 281
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQVK 164
H + F G C+G A +E + L +L F R + ++
Sbjct: 282 -----REMH----LAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLL 329
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 60.7 bits (148), Expect = 2e-11
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 8/102 (7%)
Query: 51 ESLRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSK 110
E +R YP+V +SR D+ TI + + S L + P + PE+ +R
Sbjct: 273 ELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR--- 328
Query: 111 ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF 152
+ RH G C+G A ME V L + L
Sbjct: 329 GLAPIRH----TTMGVGAHRCVGAGLARMEVIVFLREWLGGM 366
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 51.1 bits (123), Expect = 4e-08
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 51 ESLRLYPSVPY-ISRWLEQDLVLGEYTIPAQSNIGIMSYLM-HRSPELYPDPEKFDPERF 108
E LR V R D+ + I A + S L +R+P ++FD R
Sbjct: 265 EVLRHASIVEAPAPRVALADVRMAGRDIHAGDVL-TCSMLATNRAP-----GDRFDITR- 317
Query: 109 SKENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVILTQLLRKF 152
H + F G +CIG A ++ +V L ++ +F
Sbjct: 318 ----EKATH----MAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.7 bits (105), Expect = 7e-06
Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 81/225 (36%)
Query: 6 YLKTSL-FSFQDKVVS---EIEDIFGPQECKDIRKEHLKKMEY---------LEKVLKES 52
+ K + FS D V++ + FG ++ K IR E+ M + EK+ KE
Sbjct: 1652 HFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIR-ENYSAMIFETIVDGKLKTEKIFKEI 1710
Query: 53 LRLYPSVPYISRWLEQDLVLGEYTIPAQSNIGIMSYLMH---RSPELYPDPEKFDPERFS 109
S + S + L ++T PA + +M +S L P F
Sbjct: 1711 NEHSTSYTFRSE--KGLLSATQFTQPA---LTLMEKAAFEDLKSKGLIPADATF------ 1759
Query: 110 KENSAGRHP---------FA-YIPFS---------------AGPRNCIGQ-RFAMM---- 139
AG H A + A PR+ +G+ + M+
Sbjct: 1760 ----AG-HSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINP 1814
Query: 140 --------EEKV--ILTQLLRKFRF--EAV--SSPDQVKCIPYVV 170
+E + ++ ++ ++ + E V + +Q YV
Sbjct: 1815 GRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQ----YVA 1855
Score = 30.0 bits (67), Expect = 0.55
Identities = 24/149 (16%), Positives = 40/149 (26%), Gaps = 63/149 (42%)
Query: 8 KTSLFS-F--Q---DKVVSEIEDIF--GPQECKDIRKEHLKKMEYLEKVLKESLRLYPSV 59
L + F Q D E+ D++ D+ K + + L + ++ +++
Sbjct: 153 NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQG 212
Query: 60 PYISRWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDPERFSKENSAGRHPF 119
I WLE P PD + +
Sbjct: 213 LNILEWLEN-------------------------PSNTPDKD-Y---------------L 231
Query: 120 AYIPFSAGPRNCIGQRFAMMEEKVILTQL 148
IP S P IG + QL
Sbjct: 232 LSIPIS-CP--LIG-----------VIQL 246
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 39.5 bits (91), Expect = 1e-04
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 9/30 (30%)
Query: 36 KEHLKKMEYLEKVLKESLRLY-P-SVPYIS 63
K+ LKK++ SL+LY S P ++
Sbjct: 19 KQALKKLQ-------ASLKLYADDSAPALA 41
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.1 bits (85), Expect = 0.002
Identities = 31/215 (14%), Positives = 61/215 (28%), Gaps = 51/215 (23%)
Query: 12 FSFQDKVVSEIEDIFGPQECKDIR---KEHLKKMEYLEKVLKES------------LRLY 56
+ ++D + + +CKD++ K L K E + ++ L
Sbjct: 16 YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTLRLFWTLLSK 74
Query: 57 PSVPY---ISRWLEQD---LVLGEYTIPAQSNIGIMSYLMHRSPELYPDPEKFDP---ER 107
+ L + L+ T Q ++ Y+ R LY D + F R
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR-LYNDNQVFAKYNVSR 133
Query: 108 FSKENSAGRH-----PFAYIPFSAGPRNCIGQRFAMMEEKVILT-QLLRKFRFEAVSSPD 161
+ P + G G K + + ++ +
Sbjct: 134 LQPYLKLRQALLELRPAKNV-LIDGVLGS-G--------KTWVALDVCLSYKVQCK-MDF 182
Query: 162 QV-------KCIPYVVLRPLNSELMVRITPRRNAE 189
++ P VL L L+ +I P +
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQK-LLYQIDPNWTSR 216
Score = 36.4 bits (83), Expect = 0.005
Identities = 37/214 (17%), Positives = 68/214 (31%), Gaps = 85/214 (39%)
Query: 10 SLFSFQDKVVS-EIEDIFGPQECKDI-----------------RKEHLKKMEY--LEKVL 49
SL K + +D+ P+E ++ K + L ++
Sbjct: 305 SLLL---KYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 50 KESLR-LYPS-----------------VPY--ISR-WLE------QDLV--LGEYTI--- 77
+ SL L P+ +P +S W + +V L +Y++
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 78 -PAQSNIGIMS-YL-----------MHRS-PELYPDPEKFDPERFSKENSAGRHPFAYIP 123
P +S I I S YL +HRS + Y P+ FD + + +++I
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ-YFYSHIG 478
Query: 124 F---SAGPRNCIGQRFAMMEEKVILTQLLRKFRF 154
+ +R + + FRF
Sbjct: 479 HHLKNIEH----PERMTLFR------MVFLDFRF 502
Score = 36.4 bits (83), Expect = 0.005
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 33/127 (25%)
Query: 38 HLKKMEYLEKVLKESLRLYPSVPYIS-RWLEQDLVLGEYTIPAQSNIGIMSYLMHRSPEL 96
HLK +E+ E++ L+ V ++ R+LEQ + + A + G + + + +
Sbjct: 480 HLKNIEHPERM-----TLFRMV-FLDFRFLEQKI---RHDSTAWNASGSILNTLQQL-KF 529
Query: 97 Y--------PDPEKF--DPERFSK--ENSAGRHPFAYIPFSAGPRNCIGQRFAMMEEKVI 144
Y P E+ F E + + + + M E++ I
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT----------DLLRIALMAEDEAI 579
Query: 145 LTQLLRK 151
+ ++
Sbjct: 580 FEEAHKQ 586
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 31.8 bits (72), Expect = 0.13
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 110 KENSAGRHPFAYIPFSAGPRNC-----IGQRFAMMEEKVILTQLLRKF-RFEAVSSPDQV 163
K G A IPF+A P I + + +++LT +LR + S +
Sbjct: 558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSK-SEFAHRIMLTNILRMMGCVKKQKSARGI 616
Query: 164 KCIP-YVVLRPL 174
+ P V+L P+
Sbjct: 617 ETRPAQVIL-PM 627
>1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase,
structural genomics, PSI, protein structure initiative;
NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB:
2h5m_A*
Length = 102
Score = 26.3 bits (58), Expect = 2.9
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 43 EYLEKVLKESLRLYPSVPYISRWLE-----QDLVLGE 74
+E + +L++ S + LE QD+ LG
Sbjct: 59 AVVEHARENNLKIIASCSFAKHMLEKEDSYQDVYLGL 95
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733,
cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES;
1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A*
3q88_A*
Length = 543
Score = 27.2 bits (61), Expect = 3.3
Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 130 NCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVL---RPLNSELMVRITPR 185
NC Q A+M + + + ++ + + V+ RP + L+ ++P
Sbjct: 417 NCFAQSQALMFGQS-YDMVYNELLKSGLNETQAKELAAHKVIPGNRPSTTILLDELSPY 474
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural
genomics, JOI for structural genomics, JCSG; 2.26A
{Shewanella baltica OS155}
Length = 243
Score = 26.8 bits (59), Expect = 4.0
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 14 FQDKVVSEIEDIFGPQECKDIRKE 37
+ ++ EI ++F QE +R++
Sbjct: 16 YFQGMLIEIPNVFSKQEVSHLREQ 39
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 26.7 bits (58), Expect = 4.4
Identities = 9/53 (16%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 16 DKVVSEIEDIFGPQECKDIRKEHLKKMEYLEKVLKESLRLYPSVPYISRWLEQ 68
D++ E E I ++ ++ +++ L++++ KV+++ R + + W ++
Sbjct: 78 DRLTQEPESI---RKWREEQRKRLQELDAASKVMEQEWRE-KAKKDLEEWNQR 126
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga
maritima} SCOP: c.1.8.15
Length = 309
Score = 26.7 bits (58), Expect = 5.5
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 98 PDPEKFDPERFSKENSAGRHPFAYIPFSAG 127
+ ++ PE AG P AY + G
Sbjct: 52 SESGEYSPEEIKIMVDAGVVPVAY--VNIG 79
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase
phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella
melitensis BV}
Length = 553
Score = 26.5 bits (59), Expect = 5.9
Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 130 NCIGQRFAMMEEKVILTQLLRKFRFEAVSSPDQVKCIPYVVL---RPLNSELMVRITPR 185
NC+ Q A+M+ + L + + + + + + + P+ V RP + + + P
Sbjct: 426 NCLAQSEALMKGRT-LDEARAQLQAKNLPASQVERIAPHRVFSGNRPSLTLIHDMLDPY 483
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome,
transcription, LSD1, alternative splicing, chromatin
regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens}
SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A*
3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A*
2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Length = 662
Score = 26.4 bits (57), Expect = 6.8
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 42 MEYLEKVLKESLRLYPSVPYISRWLEQDLVLGEYTIPA 79
+ L+ + S P +SRW G Y+ A
Sbjct: 557 LAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVA 594
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.409
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,994,302
Number of extensions: 173855
Number of successful extensions: 588
Number of sequences better than 10.0: 1
Number of HSP's gapped: 447
Number of HSP's successfully gapped: 97
Length of query: 189
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 101
Effective length of database: 4,244,745
Effective search space: 428719245
Effective search space used: 428719245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.5 bits)