BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2608
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 151/201 (75%), Gaps = 3/201 (1%)
Query: 1 MLRQTAYFLSAHKYRPILFGIPVIVPCSDTTTQQDLYQAVWLQVARLVTPLPPLETSPPN 60
M+R YFLS+ K RP LFG+P+IVPC+ T ++DLY AVW+QV+RL +PLPP E S N
Sbjct: 1083 MMRTELYFLSSQKNRPSLFGMPLIVPCTVHTRKKDLYDAVWIQVSRLASPLPPQEAS--N 1140
Query: 61 HAMDCDDSLGYEYPFVLKAITPDGMQCSLCSWTKFCLGCKLACDDTEFNYSSTTHLAIDW 120
HA DCDDS+GY+YPF L+ + DG C+ C W +FC GCK+ C + + + ++A+DW
Sbjct: 1141 HAQDCDDSMGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCKIDCGE-DRAFIGNAYIAVDW 1199
Query: 121 DPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKC 180
DPTALHLRYQ+S E+V +EHE+ S+R Q EPINL CL +FT EE LGENE YYC KC
Sbjct: 1200 DPTALHLRYQTSQERVVDEHESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKC 1259
Query: 181 KTHQLASKKLEIYRLPPVLIV 201
KTH LA+KKL+++RLPP+LI+
Sbjct: 1260 KTHCLATKKLDLWRLPPILII 1280
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 223 YSLYAIVCHSGILGGGHYVSYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDL 282
Y+LYAI CHSGILGGGHYV+YA NPN KWY YNDSSC+++ E+DT AY+LFYE++ +
Sbjct: 1510 YNLYAISCHSGILGGGHYVTYAKNPNCKWYCYNDSSCKELHPDEIDTDSAYILFYEQQGI 1569
Query: 283 DLGAYLPDVSEREMTDTKEIDEDYDENEMKKVCAV 317
D +LP ++M DT +DED+ E++ KK C +
Sbjct: 1570 DYAQFLPKTDGKKMADTSSMDEDF-ESDYKKYCVL 1603
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6 PE=1
SV=2
Length = 1406
Score = 227 bits (579), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 1 MLRQTAYFLSAHKYRPILFGIPVIVPCSDTTTQQDLYQAVWLQVARLVTPLPPLETSPPN 60
M+R YFLS + RP LFG+P+IVPC+ T ++DLY AVW+QV+ L PLPP E S
Sbjct: 881 MMRTELYFLSPQENRPSLFGMPLIVPCTVHTRKKDLYDAVWIQVSWLARPLPPQEAS--I 938
Query: 61 HAMDCDDSLGYEYPFVLKAITPDGMQCSLCSWTKFCLGCKLACDDTEFNYSSTTHLAIDW 120
HA D D+ +GY+YPF L+ + DG C+ C +FC GCK+ C + + + ++A+DW
Sbjct: 939 HAQDRDNCMGYQYPFTLRVVQKDGNSCAWCPQYRFCRGCKIDCGE-DRAFIGNAYIAVDW 997
Query: 121 DPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKC 180
PTALHLRYQ+S E+V ++HE+ S+R Q EPINL CL +FT EE LGE+E YYC KC
Sbjct: 998 HPTALHLRYQTSQERVVDKHESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKC 1057
Query: 181 KTHQLASKKLEIYRLPPVLIV 201
KTH LA+KKL+++RLPP LI+
Sbjct: 1058 KTHCLATKKLDLWRLPPFLII 1078
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 223 YSLYAIVCHSGILGGGHYVSYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDL 282
Y+LYAI CHSGIL GGHY++YA NPN KWY YNDSSC ++ E+DT AY+LFYE++ +
Sbjct: 1312 YNLYAISCHSGILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEIDTDSAYILFYEQQGI 1371
Query: 283 DLGAYLPDVSEREMTDTKEIDEDYDEN 309
D +LP + ++M DT DED + +
Sbjct: 1372 DYAQFLPKIDGKKMADTSSTDEDSESD 1398
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 25/204 (12%)
Query: 101 LACDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCL 160
LA D +S + LA+DWD L Y + +E+H + + ++++ + L C+
Sbjct: 723 LAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCI 782
Query: 161 ESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------------- 201
E FT E LGE++ +YCP CK HQ A+KK +++ LP +L+V
Sbjct: 783 ELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVV 842
Query: 202 ---LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDS 257
+R + P+ Y L A+ H G +G GHY +YA N NGKWY ++DS
Sbjct: 843 EFPIRGLNMSEFVCNLSARPY--VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS 900
Query: 258 SCRQVSSGEMDTSCAYMLFYERKD 281
+ S ++ T AY+LFY+R+D
Sbjct: 901 NVSLASEDQIVTKAAYVLFYQRRD 924
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 138/326 (42%), Gaps = 63/326 (19%)
Query: 17 ILFGIPVIVPC-SDTTTQQDLYQAVWLQVARLVT-PLPPLETSPPNHAMDCDDSLGY--- 71
+L+G P++V T + LYQAV +++R + PLP S P C+ S G
Sbjct: 599 VLYGQPLLVSVPKHRLTLESLYQAVCERISRYIKQPLPEEFLSSPLEPGACNGSRGSYEG 658
Query: 72 ---------EYPFVLKAITPDGMQCSLCSWTKFCLGCK---------------------- 100
E L + G T+ K
Sbjct: 659 DEEEMDHQEEGKEQLSEVEESGEDSQGGDPTETTQKAKGPPRHKRLFTFSLVNSCGTADI 718
Query: 101 --LACDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAY 158
LA D +S + LAIDWD L + + E+H + ++++ I L
Sbjct: 719 NSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHTSMSQPQKKKKAAIALRE 778
Query: 159 CLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----------------- 201
C+E FT E LGE++ +YCP CK HQ A+KK +++ LP +L+V
Sbjct: 779 CIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDT 838
Query: 202 -----LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYN 255
+R + R P+ Y L A+ H G +G GHY +YA N NGKWY ++
Sbjct: 839 VVEFPVRALNMSEFVCDRAARPY--VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFD 896
Query: 256 DSSCRQVSSGEMDTSCAYMLFYERKD 281
DSS S ++ T AY+LFY+R+D
Sbjct: 897 DSSVSLASEDQIVTKAAYVLFYQRRD 922
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 25/204 (12%)
Query: 101 LACDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCL 160
LA D +S + LA+DWD L Y + +E+H + + ++++ + L C+
Sbjct: 723 LAADGKLLKLNSRSTLAMDWDSETRSLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCI 782
Query: 161 ESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------------- 201
E FT E LGE++ +YCP CK HQ A+KK +++ LP +L+V
Sbjct: 783 ELFTTMETLGEHDPWYCPNCKKHQQATKKSDLWSLPKILVVHLKRFSYNRYWRDKLDTVV 842
Query: 202 ---LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDS 257
+R + P+ Y L A+ H G +G GHY +YA N NGKWY ++DS
Sbjct: 843 EFPIRGLNMSEFVCNLSARPY--VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS 900
Query: 258 SCRQVSSGEMDTSCAYMLFYERKD 281
+ S ++ T AY+LFY+R+D
Sbjct: 901 NVSLASEDQIVTKAAYVLFYQRRD 924
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 101 LACDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCL 160
LA D +S + LAIDWD L + + E+H + ++++ + L C+
Sbjct: 722 LATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQPQKKKKAAVALRECI 781
Query: 161 ESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------------- 201
E FT E LGE++ +YCP CK HQ A+KK +++ LP +L+V
Sbjct: 782 ELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVV 841
Query: 202 ---LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDS 257
+R + R P+ Y L A+ H G +G GHY +YA N NGKWY ++DS
Sbjct: 842 EFPVRALNMSEFVCDRSARPY--VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDS 899
Query: 258 SCRQVSSGEMDTSCAYMLFYERKD 281
S S ++ T AY+LFY+R+D
Sbjct: 900 SVSLASEDQIVTKAAYVLFYQRRD 923
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 25/204 (12%)
Query: 101 LACDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCL 160
LA D +S + LAIDWD Y + +E+H + + ++++ + L C+
Sbjct: 723 LATDGKLLKLNSRSTLAIDWDSETRSCYYNEQESETYEKHVSMLQPQKKKKTAVALRDCI 782
Query: 161 ESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------------- 201
E FT E LGE++ +YCP CK HQ A+KK +++ LP +L+V
Sbjct: 783 ELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVV 842
Query: 202 ---LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDS 257
+R + P+ Y L A+ H G +G GHY +YA N NGKWY ++DS
Sbjct: 843 EFPVRGLNMSEFVCDPSARPY--VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS 900
Query: 258 SCRQVSSGEMDTSCAYMLFYERKD 281
+ ++ T AY+LFY+R+D
Sbjct: 901 NVSLACEDQIVTKAAYVLFYQRRD 924
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 104 DDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESF 163
DD + + LA+DWDP + + + FE+HE+ + K + + L C+E F
Sbjct: 708 DDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHES-VEYKPPKRPFVKLKDCIELF 766
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF---- 219
T +E LG + +YCP CK HQ A+KKL+++ LPPVL+V S + D
Sbjct: 767 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFP 826
Query: 220 --DL--------------KYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQV 262
DL +Y+L A+ H G +GGGHY ++A N +GKWY ++DSS
Sbjct: 827 ISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSSA 886
Query: 263 SSGEMDTSCAYMLFYERKD 281
S ++ + AY+LFY+R+D
Sbjct: 887 SEDQIVSKAAYVLFYQRQD 905
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 104 DDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESF 163
DD + + LA+DWDP + + + FE+HE+ + K + + L C+E F
Sbjct: 737 DDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHES-VEYKPPKKPFVKLKDCIELF 795
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF---- 219
T +E LG + +YCP CK HQ A+KKL+++ LPPVL+V S + D
Sbjct: 796 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFP 855
Query: 220 --DL--------------KYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQV 262
DL +Y+L A+ H G +GGGHY ++A N +GKWY ++DSS
Sbjct: 856 INDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTA 915
Query: 263 SSGEMDTSCAYMLFYERKD 281
S ++ + AY+LFY+R+D
Sbjct: 916 SEDQIVSKAAYVLFYQRQD 934
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 104 DDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESF 163
DD + + LA+DWDP + + + FE+HE+ + K + + L C+E F
Sbjct: 708 DDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHES-VEYKPPKKPFVKLKDCIELF 766
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF---- 219
T +E LG + +YCP CK HQ A+KKL+++ LPPVL+V S + D
Sbjct: 767 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFP 826
Query: 220 --DL--------------KYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQV 262
DL +Y+L A+ H G +GGGHY ++A N +GKWY ++DSS
Sbjct: 827 INDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTA 886
Query: 263 SSGEMDTSCAYMLFYERKD 281
S ++ + AY+LFY+R+D
Sbjct: 887 SEDQIVSKAAYVLFYQRQD 905
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 104 DDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESF 163
DD + + LA+DWDP + + + FE+HE+ + K + + L C+E F
Sbjct: 737 DDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHES-VEYKPPKRPFVKLKDCIELF 795
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF---- 219
T +E LG + +YCP CK HQ A+KKL+++ LPPVL+V S + D
Sbjct: 796 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFP 855
Query: 220 --DL--------------KYSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQV 262
DL +Y+L A+ H G +GGGHY ++A N +GKWY ++DSS
Sbjct: 856 ISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTA 915
Query: 263 SSGEMDTSCAYMLFYERKD 281
S ++ + AY+LFY+R+D
Sbjct: 916 SEDQIVSKAAYVLFYQRQD 934
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 24/157 (15%)
Query: 145 ASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV--- 201
+KR Q E ++L CLE+F EE LG ++ +YCP CK H+ A KKL+++RLP +L++
Sbjct: 714 GTKRPQ-ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLK 772
Query: 202 -------------------LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVS 242
L N + S+ ++ + +Y LYAI H G +GGGHY +
Sbjct: 773 RFSYSRFMKNKLEAYVDFPLDNLDLSSY-ISYKNGQTTYRYMLYAISNHYGSMGGGHYTA 831
Query: 243 YALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYER 279
Y + +WY ++DS Q+S ++ TS AY+LFY+R
Sbjct: 832 YVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 868
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 23/208 (11%)
Query: 104 DDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESF 163
D+ + ++LA+DWDP + + + FE+HE+ + +++ + L C+E F
Sbjct: 737 DERQLRLDERSYLALDWDPKLKKKFFDENAAEDFEKHESVDFTPQKKAF-MKLKDCIELF 795
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF---- 219
T +E LG + +YCP CK HQ A+KKL+++ LPPVL+V S + D
Sbjct: 796 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFP 855
Query: 220 --DLK--------------YSLYAIVCHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQV 262
DL Y+L A+ H G +GGGHY ++A N +GKWY ++DSS
Sbjct: 856 ISDLDMSTFLINPNAGPCCYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTA 915
Query: 263 SSGEMDTSCAYMLFYERKDLDLG-AYLP 289
S ++ + AY+LFY+R+D G + P
Sbjct: 916 SEEQIVSKAAYVLFYQRQDTITGTGFFP 943
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 97 LGCKLACDDTEFNYSSTTHLAIDWDPTALHLRYQSS-LEKVFEEHETCIASKREQTEPIN 155
L K ++ + + T + ++W+ H RY SS L + E H+T ++K+ + E I+
Sbjct: 691 LNIKPLQSESSISPGTVTRVLVEWN-EGEHERYDSSYLSDLPEVHKTSFSAKKTRQESIS 749
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRG 215
L CLE+F EE LG ++ ++CP CK H+ A+KKL++++LP +L+ S L
Sbjct: 750 LFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNK 809
Query: 216 HDPF--------DLK------------YSLYAIVCHSGILGGGHYVSYA-LNPNGKWYAY 254
D F DL Y LYA+ H G LGGGHY +YA L + KWY +
Sbjct: 810 IDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHF 869
Query: 255 NDSSCRQVSSGEMDTSCAYMLFYER 279
+DS V+ E+ S AY+LFY R
Sbjct: 870 DDSHVSSVNESEIRNSAAYVLFYRR 894
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 23/189 (12%)
Query: 113 TTHLAIDWDPTALHLRYQSS-LEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGE 171
T + ++W+ H RY SS L + E H+T ++K+ + E I+L CLE+F EE LG
Sbjct: 706 ATRVLVEWN-EGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGP 764
Query: 172 NEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF--------DLK- 222
++ ++CP CK H+ A+KKL++++LP +L+ S L D F DL
Sbjct: 765 DDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSK 824
Query: 223 -----------YSLYAIVCHSGILGGGHYVSYA-LNPNGKWYAYNDSSCRQVSSGEMDTS 270
Y LYA+ H G LGGGHY +YA L + +WY ++DS V+ E+ S
Sbjct: 825 YVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNS 884
Query: 271 CAYMLFYER 279
AY+LFY R
Sbjct: 885 AAYVLFYRR 893
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 106/197 (53%), Gaps = 24/197 (12%)
Query: 105 DTEFNYSSTTHLAIDWDPTALHLRYQSS-LEKVFEEHETCIASKREQTEPINLAYCLESF 163
D+ N S T + + W+ H +Y SS L + + H+ +A K Q E I+L CLE+F
Sbjct: 685 DSVVNPGSVTKVLVKWNEKE-HEKYDSSYLNDLPKVHKNVLAKKTMQ-EGISLFSCLEAF 742
Query: 164 TKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----------LRN---TTVQSH 210
EE LG ++ +YCP CK H+ A+KKL++++LP +L+ +N T V H
Sbjct: 743 LAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFH 802
Query: 211 -------RLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYA-LNPNGKWYAYNDSSCRQV 262
+ + D Y LYAI H G LGGGHY +YA L KWY ++DS V
Sbjct: 803 IHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGGHYTAYAKLMDETKWYNFDDSRVSAV 862
Query: 263 SSGEMDTSCAYMLFYER 279
+ E+ TS AY+LFY+R
Sbjct: 863 NESEIKTSAAYVLFYQR 879
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 23/200 (11%)
Query: 111 SSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLG 170
S+T + +DW P + + LE + E + +K+ ++EP++L CLE+F +EE L
Sbjct: 725 SATVTIYLDWTPELSGMYDITCLESLPEVLKYGPTTKKARSEPLSLYACLEAFLREEPLV 784
Query: 171 ENEKYYCPKCKTHQLASKKLEIYRLPPVLIVLRNTTVQSHRLTRGHDPF------DLK-- 222
+E ++CP+C + ASKKL+++RLP VL++ S + + F DL
Sbjct: 785 PDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLT 844
Query: 223 -------------YSLYAIVCHSGILGGGHYVSY-ALNPNGKWYAYNDSSCRQVSSGEMD 268
Y LYA+ H G +G GHY ++ L + +WY ++DS ++ ++
Sbjct: 845 KYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVK 904
Query: 269 TSCAYMLFYERKDLDLGAYL 288
+ AY+LFY RK D G +
Sbjct: 905 SGAAYVLFYRRKS-DAGGKM 923
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 27/193 (13%)
Query: 115 HLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEK 174
++AIDW+P + RY +E C+ ++ P+ L C+E FT E L +
Sbjct: 742 YIAIDWEP-EMKKRYYDEVEAEGYVKHDCVGYVMKKA-PVRLQECIELFTTVETLEKENP 799
Query: 175 YYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQSHRL------------------ 212
+YCP CK HQLA+KKL+++ LP +LI+ T +L
Sbjct: 800 WYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 859
Query: 213 --TRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNPN-GKWYAYNDSSCRQVSSGEMDT 269
+P KY L A+ H G + GHY ++A N + G+W+ ++D+S V+ ++++
Sbjct: 860 QPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIES 919
Query: 270 SCAYMLFYERKDL 282
AY+LFY+R+D+
Sbjct: 920 KAAYVLFYQRQDV 932
>sp|Q8BUM9|UBP43_MOUSE Ubiquitin carboxyl-terminal hydrolase 43 OS=Mus musculus GN=Usp43
PE=2 SV=2
Length = 1132
Score = 95.9 bits (237), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 45/211 (21%)
Query: 116 LAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEP-INLAYCLESFTKEEHLGENEK 174
LA++WD + + S E+ ++ ++ ++ +P L C +S+TKEE L +++
Sbjct: 501 LAVEWDSSVTERLFGSLQEERVQDADSVWRQQQAHQQPSCTLDECFQSYTKEEQLAQDDA 560
Query: 175 YYCPKCKTHQLASKKLEIYRLPPVLIV----------------------LRNTTVQSHRL 212
+ CP C+ Q KL ++ LP +LI+ L + H
Sbjct: 561 WKCPHCQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVA 620
Query: 213 TRGHD---------------------PFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGK 250
R + P D Y LYA+ H G L GGHY +Y N +G+
Sbjct: 621 RRSTNSKAGPGPWSSWKQPICLPTTYPLDFLYDLYAVCNHHGSLQGGHYTAYCRNSLDGQ 680
Query: 251 WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
WY+Y+DS+ + E++T AY+LFY++++
Sbjct: 681 WYSYDDSTVEALREDEVNTRGAYILFYQKRN 711
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 27/193 (13%)
Query: 115 HLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEK 174
++A+DW+P + RY +E C+ +++ P+ L C++ FT E L +
Sbjct: 701 YIAMDWEPD-MKRRYYDEVEAEGYVKHDCVGYMLKKS-PVQLKECIKLFTTVETLEKENP 758
Query: 175 YYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQSHRL-------TRGHD------ 217
+YC CK HQLA+KKL+++ LP VLI+ + + +L R D
Sbjct: 759 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVI 818
Query: 218 -------PFDLKYSLYAIVCHSGILGGGHYVSYALNPN-GKWYAYNDSSCRQVSSGEMDT 269
P KY L A+ H G + GHY ++A N + G+W+ ++D+S V+ ++++
Sbjct: 819 KPKNESSPDLYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIES 878
Query: 270 SCAYMLFYERKDL 282
AY+LFY+R+D+
Sbjct: 879 KAAYVLFYQRQDV 891
>sp|O60079|UBP12_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp12 PE=1 SV=1
Length = 979
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 31/172 (18%)
Query: 139 EHETCIASKREQTE---PINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRL 195
E +T ++ K++ +E I L CL+ F K E LGE + +YCP CK + ASK++EI+R
Sbjct: 807 ESKTILSDKKDDSEDSRTITLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRC 866
Query: 196 PPVLIV-LRNTTVQ-------------------------SHRLTRGHDPFDLKYSLYAIV 229
P +LI L+ + + S++L+ +P L Y LYA+
Sbjct: 867 PEILIFHLKRFSSERRFRDKIDDLVEFPIDNLDMSMRTGSYKLSEKENP-KLIYELYAVD 925
Query: 230 CHSGILGGGHYVSYALNP-NGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERK 280
H G LGGGHY ++A NP NG++Y ++DS V E TS AY+LFY RK
Sbjct: 926 NHYGGLGGGHYTAFAKNPDNGQFYCFDDSRVTPVCPEETVTSAAYLLFYRRK 977
>sp|P39944|UBP5_YEAST Ubiquitin carboxyl-terminal hydrolase 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP5 PE=1 SV=1
Length = 805
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 77/159 (48%), Gaps = 35/159 (22%)
Query: 155 NLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----------LRN 204
N+ C FTK E LG +E++ CPKC Q ++K+L+I RLP LI+ N
Sbjct: 646 NILDCFREFTKCERLGVDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRFDNQMNKNN 705
Query: 205 TTVQ---------------SHRL-------TRGHDPFDLKYSLYAIVCHSGILGGGHYVS 242
VQ +H TRG P +Y LY + CHSG L GGHY S
Sbjct: 706 VFVQYPYSLDLTPYWARDFNHEAIVNEDIPTRGQVP-PFRYRLYGVACHSGSLYGGHYTS 764
Query: 243 YAL-NPNGKWYAYNDSSCRQVS-SGEMDTSCAYMLFYER 279
Y P WY ++DS R ++ S E T AY+LFYER
Sbjct: 765 YVYKGPKKGWYFFDDSLYRPITFSTEFITPSAYVLFYER 803
>sp|Q01988|UBP11_CANFA Ubiquitin carboxyl-terminal hydrolase 11 (Fragment) OS=Canis
familiaris GN=USP11 PE=2 SV=1
Length = 445
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 103 CDDTEFNYSSTT--HLAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPINLAYCL 160
D + FN + ++AIDW+P + RY +E C+ ++ P+ L C+
Sbjct: 210 SDRSTFNEDTHAQPYIAIDWEP-EMKKRYYDEVEAEGYVKHDCVGYVLKKA-PVRLQECI 267
Query: 161 ESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQSHRL---- 212
E FT E L + ++CP CK HQLA+KKL+++ LP LI+ T +L
Sbjct: 268 ELFTTVETLEKENPWFCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLV 327
Query: 213 ---TRGHD-------------PFDLKYSLYAIVCHSGILGGGHYVSYALNPN-GKWYAYN 255
R D P KY L A+ H G L GHY ++A N + G+ ++
Sbjct: 328 EFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQSDYFD 387
Query: 256 DSSCRQVSSGEMDTSCAYMLFYERKDL 282
D+S V+ ++++ AY+LFY+R+D+
Sbjct: 388 DNSVSPVTENQIESKAAYVLFYQRQDV 414
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 116 LAIDWDPTALHLRYQSSLEKVFEEHETCIASKREQTEPIN--LAYCLESFTKEEHLGENE 173
L ++WD + ++ ++ + E+ + +P L+ C + +TKEE L ++
Sbjct: 556 LVVEWDKETRDFLFVNTEDEYIPDAESVRLQRERHHQPQTCTLSQCFQLYTKEERLAPDD 615
Query: 174 KYYCPKCKTHQLASKKLEIYRLPPVLIV----------------------LRNTTVQSHR 211
+ CP CK Q S L ++ LP VLI+ L + H
Sbjct: 616 AWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHV 675
Query: 212 LTR--------------------GHDPFDLKYSLYAIVCHSGILGGGHYVSYALNP-NGK 250
+ R G DP D Y LYA+ H G + GGHY +Y N +G
Sbjct: 676 VKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCKNSVDGL 735
Query: 251 WYAYNDSSCRQVSSGEMDTSCAYMLFYERK 280
WY ++DS +Q+S E+ T AY+LFY+R+
Sbjct: 736 WYCFDDSDVQQLSEDEVCTQTAYILFYQRR 765
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 45/211 (21%)
Query: 116 LAIDWDPTALHLRYQSSLEKVFEEHETC-IASKREQTEPINLAYCLESFTKEEHLGENEK 174
LA++WD + + S E+ ++ ++ + Q L C + +TKEE L +++
Sbjct: 501 LAVEWDSSVKERLFGSLQEERAQDADSVWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDA 560
Query: 175 YYCPKCKTHQLASKKLEIYRLPPVLIV----------------------LRNTTVQSHRL 212
+ CP C+ Q KL ++ LP +LI+ L + H
Sbjct: 561 WKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVA 620
Query: 213 TRGHDP---------------------FDLKYSLYAIVCHSGILGGGHYVSYALNP-NGK 250
R P D Y LYA+ H G L GGHY +Y N +G+
Sbjct: 621 QRSTSPEAGLGPWPSWKQPDCLPTSYPLDFLYDLYAVCNHHGNLQGGHYTAYCRNSLDGQ 680
Query: 251 WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
WY+Y+DS+ + E++T AY+LFY++++
Sbjct: 681 WYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------ 201
L CL FT+ E L E +YCP+CK H+ ASK+L ++RLP VLIV
Sbjct: 1100 FTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIW 1159
Query: 202 -----------LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNPNGK 250
+RN + + + + Y LYA++ H G + GGHY + A PN +
Sbjct: 1160 RDKINDLVEFPVRNLDLSKFCIGQKEEQLP-SYDLYAVINHYGGMIGGHYTACARLPNDR 1218
Query: 251 --------WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
W ++DS+ V ++ T AY+LFY R++
Sbjct: 1219 SSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1257
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------ 201
L CL FT+ E L E +YCP+CK H+ ASK+L ++RLP VLIV
Sbjct: 1058 FTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIW 1117
Query: 202 -----------LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNPNGK 250
+RN + + + + Y LYA++ H G + GGHY + A PN +
Sbjct: 1118 RDKINDLVEFPVRNLDLSKFCIGQKEEQLP-SYDLYAVINHYGGMIGGHYTACARLPNDR 1176
Query: 251 --------WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
W ++DS+ V ++ T AY+LFY R++
Sbjct: 1177 SSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1215
>sp|Q9USM5|UBP1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp1 PE=3 SV=1
Length = 849
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 134 EKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIY 193
EK+F E + E I L CL F+K E L + +YCP CK + A+K+LEI+
Sbjct: 670 EKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIW 729
Query: 194 RLPPVLIVLRNTT--------------------VQSHRLTRGHDPF-----------DLK 222
RLP +L++ N V L + PF +
Sbjct: 730 RLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSML 789
Query: 223 YSLYAIVCHSGILGGGHYVSYALNPNGK-WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
Y LYA+ H G + GHY +YA + + + ++ ++D++ ++ ++ TS AY+LFY K+
Sbjct: 790 YDLYAVDNHHGFMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFYRAKN 849
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------------ 201
L CL FT+ E L E +YCP+CK H+ ASK+L ++RLP VLIV
Sbjct: 1097 FTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIW 1156
Query: 202 -----------LRNTTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNPNGK 250
+RN + + + + Y LYA++ H G + GGHY + A P+ +
Sbjct: 1157 RDKINDLVEFPVRNLDLSKFCIGQKEEQLP-SYDLYAVINHYGGMIGGHYTACARLPSDR 1215
Query: 251 --------WYAYNDSSCRQVSSGEMDTSCAYMLFYERKD 281
W ++DS+ V ++ T AY+LFY R++
Sbjct: 1216 SSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1254
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 20/145 (13%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L CL FTKE+ L +EK C +CK +KK I + P +L++ +++
Sbjct: 205 VTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRA 264
Query: 210 HRLTRGHD----PFDLK-----------YSLYAIVCHSGILGGGHYVSYALNP-NGKWYA 253
+LT + DL+ Y+LYA+ HSG GGHY +Y +P + +W++
Sbjct: 265 SKLTTFVNFPLKDLDLREFASQSCNHAVYNLYAVSNHSGTTMGGHYTAYCKSPISSEWHS 324
Query: 254 YNDSSCRQVSSGEMDTSCAYMLFYE 278
+NDS +SS + +S AY+LFYE
Sbjct: 325 FNDSRVTPMSSSHVRSSDAYLLFYE 349
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 25/158 (15%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV-LRNTTVQSHRLTR 214
L CL F+KEE L +N ++YC C+ + + KK+EI++LPPVL+V L+ + +
Sbjct: 926 LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQK 985
Query: 215 GHDPFDL-------------------KYSLYAIVCHSGILGGGHYVSYALN-PNGKWYAY 254
D KY+L+++ H G L GGHY +Y N +W+ +
Sbjct: 986 LQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKF 1045
Query: 255 NDSSCRQVSSGEMDTSCAYMLFYERKDLDLGAYLPDVS 292
+D +S + +S AY+LFY LG + DV+
Sbjct: 1046 DDHEVSDISVSSVRSSAAYILFY----TSLGPRITDVA 1079
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 25/158 (15%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV-LRNTTVQSHRLTR 214
L CL F+KEE L +N ++YC C+ + + KK+EI++LPPVL+V L+ + +
Sbjct: 964 LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQK 1023
Query: 215 GHDPFDL-------------------KYSLYAIVCHSGILGGGHYVSYALN-PNGKWYAY 254
D KY+L+++ H G L GGHY +Y N +W+ +
Sbjct: 1024 LQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKF 1083
Query: 255 NDSSCRQVSSGEMDTSCAYMLFYERKDLDLGAYLPDVS 292
+D +S + +S AY+LFY LG + DV+
Sbjct: 1084 DDHEVSDISVSSVKSSAAYILFY----TSLGPRVTDVA 1117
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP12 PE=1 SV=1
Length = 1254
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 43/218 (19%)
Query: 89 LCSWTKFCLGCKLA-CDDTEFNYSSTTHLAIDWDPTALHLRYQSSLEKVFEEHETCIASK 147
+C W++ LG A DD +N+ + L K E + ++
Sbjct: 916 VCEWSE--LGSNEAFSDDKIYNWENPATLP----------------NKELENAKLERSNA 957
Query: 148 REQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV------ 201
+E+T I L CL+ F+K E LG + +YCP CK H+ A+K+++++ P +L++
Sbjct: 958 KERT--ITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFE 1015
Query: 202 -----------LRNTTVQSHRLTR----GHDPFDLKYSLYAIVCHSGILGGGHYVSYALN 246
N + L+R DP L Y LYA+ H G LGGGHY +Y N
Sbjct: 1016 SQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVKN 1075
Query: 247 -PNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
+ KWY ++DS + + AY+LFY R+ D
Sbjct: 1076 FADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKD 1113
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L C+ FTKE+ L +EK C +C+ + KK I R P +L++ + +++
Sbjct: 453 VTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRT 512
Query: 210 HRLTRGHD----PFDLK-----------YSLYAIVCHSGILGGGHYVSYALNPN-GKWYA 253
+LT + DL+ Y+LYA+ HSG GGHY +Y +P G+W+
Sbjct: 513 SKLTTFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHT 572
Query: 254 YNDSSCRQVSSGEMDTSCAYMLFYE 278
+NDSS +SS ++ TS AY+LFYE
Sbjct: 573 FNDSSVTPMSSSQVRTSDAYLLFYE 597
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L C+ FTKE+ L +EK C +C+ + KK + R P +L++ + +++
Sbjct: 461 VTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRT 520
Query: 210 HRLTRGHD----PFDLK-----------YSLYAIVCHSGILGGGHYVSYALNP-NGKWYA 253
+LT + DL+ Y+LYA+ HSG GGHY +Y +P G+W+
Sbjct: 521 SKLTTFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHT 580
Query: 254 YNDSSCRQVSSGEMDTSCAYMLFYE 278
+NDSS +SS ++ TS AY+LFYE
Sbjct: 581 FNDSSVTPMSSSQVRTSDAYLLFYE 605
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L C+ FTKE+ L +EK C +C+ + KK + R P +L++ + +++
Sbjct: 466 VTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRT 525
Query: 210 HRLTRGHD----PFDLK-----------YSLYAIVCHSGILGGGHYVSYALNP-NGKWYA 253
+LT + DL+ Y+LYA+ HSG GGHY +Y +P G+W+
Sbjct: 526 SKLTTFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHT 585
Query: 254 YNDSSCRQVSSGEMDTSCAYMLFYE 278
+NDSS +SS ++ TS AY+LFYE
Sbjct: 586 FNDSSVTPMSSSQVRTSDAYLLFYE 610
>sp|Q754R5|UBP4_ASHGO Ubiquitin carboxyl-terminal hydrolase 4 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=DOA4 PE=3 SV=2
Length = 852
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 72/160 (45%), Gaps = 38/160 (23%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV---------LRNTT 206
L C FTK E L + E++ CP CK Q ++KK+ I RLP LI+ +N
Sbjct: 691 LTDCFTEFTKIETLEQEEQWSCPSCKKRQPSTKKITITRLPRNLIIHLKRFDNMLNKNNV 750
Query: 207 VQSH----------------RLT--------RGHDPFDLKYSLYAIVCHSGILGGGHYVS 242
S+ ++T RG P Y LY I CH G L GHY +
Sbjct: 751 FVSYPSVLDLTAFWANDYDKKVTNNNVELPSRGQVP-PFNYQLYGIACHDGTLRAGHYTA 809
Query: 243 YALNPNG--KWYAYNDSSCRQVSSG-EMDTSCAYMLFYER 279
Y +N W Y+D++ RQ+ S E T AY+LFY R
Sbjct: 810 Y-VNKGAVLGWCYYDDTNWRQIRSAREYITQNAYVLFYHR 848
>sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP8 PE=1 SV=1
Length = 471
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 30/154 (19%)
Query: 159 CLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----------------- 201
CL+SF K+E L ++ Y+C +C + Q A K+L I++LP VL++
Sbjct: 319 CLDSFHKKEQL-KDFNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLD 377
Query: 202 ----------LRN--TTVQSHRLTRGHDPFDLKYSLYAIVCHSGILGGGHYVSYALNPNG 249
++N +T + + + D+ Y L IV H G + GHY+++ G
Sbjct: 378 DFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGG 437
Query: 250 KWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
+W+ +NDS +S E+ AY+LFY + ++
Sbjct: 438 QWFKFNDSMVSSISQEEVLKEQAYLLFYTIRQVN 471
>sp|Q9HFS7|UBP4_KLULA Ubiquitin carboxyl-terminal hydrolase 4 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=DOA4 PE=3 SV=1
Length = 796
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 36/159 (22%)
Query: 159 CLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQSHRLT- 213
C + FTK E L ++E +YCP CK Q ++K++ I RLP LI+ N +++
Sbjct: 639 CFKEFTKLETLEKDELWYCPYCKQRQPSTKQIIITRLPNNLIIHLKRFDNMMNKNNVFVN 698
Query: 214 -----------------------------RGHDPFDLKYSLYAIVCHSGILGGGHYVSYA 244
RG P Y L+A+ HSG L GGHY S+
Sbjct: 699 YPNELDLTGFWIDDYNGEMPKDNGVSLPLRGQKP-PFNYRLFAVASHSGTLYGGHYTSFV 757
Query: 245 LNPNGKWYAYNDSSCRQV-SSGEMDTSCAYMLFYERKDL 282
W +++D S R++ E T AY+LFY R ++
Sbjct: 758 DKGRVGWCSFDDVSWRKIRRKDEYITPNAYVLFYRRVNM 796
>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
PE=2 SV=1
Length = 711
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 33/162 (20%)
Query: 155 NLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV-LRN--------- 204
+L CL+ FT+ EHLG + K C C+++Q ++K+L + +LP V L+
Sbjct: 548 SLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRR 607
Query: 205 ------------------TTVQSHRLTRGHDPFDL-----KYSLYAIVCHSGILGGGHYV 241
+ + R+ G P D KYSL+A++ H G L GHY
Sbjct: 608 KINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGTLESGHYT 667
Query: 242 SYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
S+ +W++ +D+ + + ++ S Y+LFY ++ L+
Sbjct: 668 SFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 709
>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DOA4 PE=3 SV=1
Length = 926
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 147 KREQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----- 201
K+ I + C FTK E+L +E++ CP CK Q ++K+L I RLP LIV
Sbjct: 754 KKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCKKRQPSTKQLTITRLPRNLIVHLKRF 813
Query: 202 --LRNTT---------------------------VQSHRL-TRGHDPFDLKYSLYAIVCH 231
L N V L RG P KY LY + CH
Sbjct: 814 DNLLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQIP-PFKYELYGVACH 872
Query: 232 SGILGGGHYVSYALNPNGK-WYAYNDSSCRQV-SSGEMDTSCAYMLFYER 279
G L GGHY +Y K W ++D+ + V + + S AY+LFY R
Sbjct: 873 FGTLYGGHYTAYVKKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLFYHR 922
>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
PE=2 SV=1
Length = 912
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L CL +F + L + Y C +CK + K ++ RLP +L + R+ + S
Sbjct: 535 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 594
Query: 210 HRLT-------RGHD--PFDLK--------YSLYAIVCHSGILGGGHYVSYALNP-NGKW 251
+++ G D PF K Y L +++CH G G GHY++Y N NG+W
Sbjct: 595 FKISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 654
Query: 252 YAYNDSSCRQVSSGEMDTSCAYMLFYER 279
Y ++D +V + + AY+LFY +
Sbjct: 655 YEFDDQYVTEVHETVVQNAEAYVLFYRK 682
>sp|A5PN09|UBP20_DANRE Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20
PE=2 SV=1
Length = 911
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L CL +F + L + Y C +CK + K ++ RLP +L + R+ + S
Sbjct: 537 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 596
Query: 210 HRLT-------RGHD--PFDLK--------YSLYAIVCHSGILGGGHYVSYALNP-NGKW 251
++ G D PF K Y L +++CH G G GHY++Y N NG+W
Sbjct: 597 FKINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 656
Query: 252 YAYNDSSCRQVSSGEMDTSCAYMLFYER 279
Y ++D +V + + AY+LFY +
Sbjct: 657 YEFDDQYVTEVHETVVQNAEAYVLFYRK 684
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVL------------IVLR 203
L CL FT+ EHLG + K C C ++Q ++K+L + +LP V + +
Sbjct: 351 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRK 410
Query: 204 NTTVQSHRLTRGHDPF----------------------DLKYSLYAIVCHSGILGGGHYV 241
TT S L PF D KYSL+A+V H G L GHY
Sbjct: 411 ITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYT 470
Query: 242 SYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
S+ +W+ +D+ + S ++ S Y+LFY ++ L+
Sbjct: 471 SFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFYHKQFLE 512
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
+ L C+ FTKE+ L +EK C +C+ + KK I R P +L++ + +++
Sbjct: 454 VTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRT 513
Query: 210 HRLTRGHD----PFDLK-----------YSLYAIVCHSGILGGGHYVSYALNP-NGKWYA 253
+LT + DL+ Y+LYA+ HSG GGHY +Y +P G+W+
Sbjct: 514 SKLTAFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHT 573
Query: 254 YNDSSCRQVSSGEMDTSCAYMLFYE 278
+NDSS +SS ++ TS AY+LFYE
Sbjct: 574 FNDSSVSPMSSSQVRTSDAYLLFYE 598
>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
PE=2 SV=1
Length = 840
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 154 INLAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVLIV----LRNTTVQS 209
I L CL +F + L + Y C +CK + K ++ RLP VL + R+ + S
Sbjct: 463 ITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYS 522
Query: 210 HRLTRGHDPFDLK------------------YSLYAIVCHSGILGGGHYVSYALNP-NGK 250
++ H F L+ Y L A++CH G GHY+SY N NG+
Sbjct: 523 FKIG-SHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSGHYISYCQNVINGQ 581
Query: 251 WYAYNDSSCRQVSSGEMDTSCAYMLFYER 279
WY ++D +V + + AY+LFY +
Sbjct: 582 WYEFDDQYVTEVHETVVQNAEAYVLFYRK 610
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 129 YQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASK 188
Y+S+ +VF + I K ++L C FTKEE L C +C+ ++K
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTK 448
Query: 189 KLEIYRLPPVLIVLRNTTVQS---------------HRLTRGHDPFDLK----YSLYAIV 229
KL + R P +L++ N S RL+ G D Y LYA+
Sbjct: 449 KLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALC 508
Query: 230 CHSGILGGGHYVSYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYE 278
HSG + GHY + G W+ YNDS VS ++ +S Y+LFY+
Sbjct: 509 NHSGSVHYGHYTALCRCQTG-WHVYNDSRVSPVSENQVASSEGYVLFYQ 556
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 129 YQSSLEKVFEEHETCIASKREQTEPINLAYCLESFTKEEHLGENEKYYCPKCKTHQLASK 188
Y+S+ +VF + I K ++L C FTKEE L C +C+ ++K
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTK 448
Query: 189 KLEIYRLPPVLIVLRNTTVQS---------------HRLTRGHDPFDLK----YSLYAIV 229
KL + R P +L++ N S RL+ G D Y LYA+
Sbjct: 449 KLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALC 508
Query: 230 CHSGILGGGHYVSYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYE 278
HSG + GHY + G W+ YNDS VS ++ +S Y+LFY+
Sbjct: 509 NHSGSVHYGHYTALCRCQTG-WHVYNDSRVSPVSENQVASSEGYVLFYQ 556
>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
PE=2 SV=2
Length = 525
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVL------------IVLR 203
L CL FT+ EHLG + K C C ++Q ++K+L + +LP V + +
Sbjct: 362 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRK 421
Query: 204 NTTVQSHRLTRGHDPF----------------------DLKYSLYAIVCHSGILGGGHYV 241
TT S L PF D KYSL+A+V H G L GHY
Sbjct: 422 ITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQGTLESGHYT 481
Query: 242 SYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
S+ +W+ +D+ + S ++ S Y+LFY ++ L+
Sbjct: 482 SFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLE 523
>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
PE=2 SV=1
Length = 506
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 156 LAYCLESFTKEEHLGENEKYYCPKCKTHQLASKKLEIYRLPPVL------------IVLR 203
L CL FT+ EHLG + K C C ++Q ++K+L + RLP V + +
Sbjct: 343 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRK 402
Query: 204 NTTVQSHRLTRGHDPF----------------------DLKYSLYAIVCHSGILGGGHYV 241
TT S L PF D KYSL+A+V H G L GHY
Sbjct: 403 ITTYVSFPLELDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQGTLESGHYT 462
Query: 242 SYALNPNGKWYAYNDSSCRQVSSGEMDTSCAYMLFYERKDLD 283
++ +W+ +D+ + S ++ S Y+LFY ++ L+
Sbjct: 463 TFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLE 504
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,072,059
Number of Sequences: 539616
Number of extensions: 5336828
Number of successful extensions: 11658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 11112
Number of HSP's gapped (non-prelim): 382
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)