BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2618
(390 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/411 (63%), Positives = 301/411 (73%), Gaps = 35/411 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
+E+ P TLYVGNLDVSVTE+LLC LFSQIG VKGCK+IREP NDPYAF+EFV+H A+TA
Sbjct: 5 EENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTA 64
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR LEKE+KVNWA+SPGNQPKQDTS+H+HIFVGDLSPEIE TL+EAFAPFGEI
Sbjct: 65 LIAMNKRHVLEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDPQTLKSKGYAFVSFVKKAEAE+AI AMNGQWLG+RSIRTNWSTRKPP E
Sbjct: 125 SNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTE 184
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R RQ + K ++++EVYNQSSPTNCTVYCGGF +NE+L+ K FS FGTI DIR FK+K
Sbjct: 185 RSRQ-GNAKAVSYEEVYNQSSPTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKDK 243
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA- 301
GYAF++F+TKE ATHAIE++HN +ING VKCFWGKES + +T P Q + ++
Sbjct: 244 GYAFIRFSTKEAATHAIEAMHNAEINGQQVKCFWGKESSDPATAQNAQQPQQVQQSGSSV 303
Query: 302 ----PQFPYIYNQQMGYWYP----QAAAYTATAAQLPQQFYQ---------YGQLGY-PQ 343
+PY ++GYWYP QA TA AAQ+P Q+ Q YGQ Y PQ
Sbjct: 304 AAANAHYPYQTYTEVGYWYPPGTYQAPPVTA-AAQMPGQYLQGVQPHYAAAYGQFPYQPQ 362
Query: 344 GYVGMVGRQVP-GWQGIP---GAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G R VP GWQGIP P M P M AY M QF TQ
Sbjct: 363 G----AYRVVPAGWQGIPTPVAGPPPGTNM------PQTMMAYTMPQFQTQ 403
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/324 (74%), Positives = 266/324 (82%), Gaps = 9/324 (2%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DE+ P TLYVGNLD+SV E+LLCALFSQIGPVKGCK+IREPGNDPYAF+EF +H A+
Sbjct: 1 MSDEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSAS 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TAL AMNKRVFL+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET TL+EAFAPFG
Sbjct: 61 TALIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
E+ Q+ K ITFDEVYNQ+SPTN TVYCGGF L ++LV+K FS FG I DIRVFK
Sbjct: 181 AEKPNQSK--KQITFDEVYNQTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFK 238
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP--SAPTTPQPN 298
+KGYAF+KF +KE+ATHAIE+IHNT+INGHTVKCFWGKE N L + T
Sbjct: 239 DKGYAFIKFVSKESATHAIENIHNTEINGHTVKCFWGKE---NGGLGPDVNALSATGAAV 295
Query: 299 STAPQFPYIYNQQMGYWYPQAAAY 322
S AP + Y Y Q YWYPQ+ Y
Sbjct: 296 SQAPPYSYGYGTQ--YWYPQSGGY 317
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/319 (74%), Positives = 270/319 (84%), Gaps = 1/319 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SV+EELLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 1 MSEESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIETQTLKEAFAPFG
Sbjct: 61 TALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQT+KSKGYAFVSFVKK+EAE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ER R ++++K ++EVYNQSSPTNCTVYCGGF + +EL++K FSPFGTI DIRVFK
Sbjct: 181 SERPRHSNNSKP-NYEEVYNQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFK 239
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KFTTKE ATHAIES HNT+ING VKCFWGKE+ + +++ + Q +
Sbjct: 240 DKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAG 299
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+ Y Y QQMGYWYPQ
Sbjct: 300 AGQYAYGYGQQMGYWYPQG 318
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/302 (77%), Positives = 255/302 (84%), Gaps = 4/302 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SV+E+LLC LFSQIGPVKGCK+IREPGNDPYAF+EF +H A+
Sbjct: 1 MSDESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSAS 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR+FL+KEMKVNWA+SPGNQPKQDTSNH+HIFVGDLSPEIET+TL+EAFAPFG
Sbjct: 61 TALAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPK 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
E+ Q + K TFDEVYNQSSPTNCTVYCGGF L E+L+ K FS FG I DIRVFK
Sbjct: 181 TEKAAQRA--KQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFK 238
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KF TKE+ATHAIE+IHNT+ING VKCFWGK EN A P A T +
Sbjct: 239 DKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGK--ENGGMGADPGAAMTSGGAAV 296
Query: 301 AP 302
AP
Sbjct: 297 AP 298
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/319 (74%), Positives = 269/319 (84%), Gaps = 1/319 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SV+E+LLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 1 MSEESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIETQTLKEAFAPFG
Sbjct: 61 TALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKK+EAE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ER R ++++K ++EVYNQSSPTNCTVYCGGF + +EL+ K FSPFGTI DIRVFK
Sbjct: 181 SERPRHSNNSKP-NYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFK 239
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KFTTKE ATHAIES HNT+ING VKCFWGKE+ + +++ + Q +
Sbjct: 240 DKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAG 299
Query: 301 APQFPYIYNQQMGYWYPQA 319
Q+ Y Y QQMGYWYPQ
Sbjct: 300 VGQYAYGYGQQMGYWYPQG 318
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/319 (74%), Positives = 269/319 (84%), Gaps = 1/319 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SV+E+LLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 1 MSEESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIETQTLKEAFAPFG
Sbjct: 61 TALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKK+EAE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ER R ++++K ++EVYNQSSPTNCTVYCGGF + +EL+ K FSPFGTI DIRVFK
Sbjct: 181 SERPRHSNNSKP-NYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFK 239
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KFTTKE ATHAIES HNT+ING VKCFWGKE+ + +++ + Q +
Sbjct: 240 DKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAG 299
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+ Y Y QQM YWYPQ
Sbjct: 300 AGQYAYGYGQQMSYWYPQG 318
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/319 (74%), Positives = 269/319 (84%), Gaps = 1/319 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SV+EELLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 1 MSEESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIETQTLKEAFAPFG
Sbjct: 61 TALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQT+KSKGYAFVSFVKK+EAE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ER R ++++K ++EVYNQSSPTNCTVYCGGF + ++L++K FSPFGTI DIRVFK
Sbjct: 181 SERPRHSNNSKP-NYEEVYNQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFK 239
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KFTTKE ATHAIES HNT+ING VKCFWGKE+ + +++ + Q +
Sbjct: 240 DKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAG 299
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+ Y Y QQM YWYPQ
Sbjct: 300 AGQYAYGYGQQMSYWYPQG 318
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/321 (73%), Positives = 265/321 (82%), Gaps = 5/321 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTEELLCALF+ IGPV CKVIREPG+DPYAFLEF H+ AA
Sbjct: 1 MSDESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMN R+FL+KEMKVNWA++PGNQPK DTSNHYHIFVGDLSPEIET TLKEAFAPFG
Sbjct: 61 TALAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKK++AENAI +MNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
K S + +TFD+VYNQSSPTNCTVYCGG + L EELV +VFS FGTIV+IR F+
Sbjct: 181 APNKY--SGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFR 238
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KF+TKE AT AIE++HNT+INGH VKCFWGKES + ++ A +A ++T
Sbjct: 239 DKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGKESGDPNSAANLAAQAAASTDTT 298
Query: 301 APQFPY--IYNQQMGYWYPQA 319
Q+ Y YNQ M YWYP A
Sbjct: 299 G-QYSYNMAYNQGMNYWYPYA 318
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/340 (71%), Positives = 268/340 (78%), Gaps = 10/340 (2%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTEE LCALF QIG VKGCK+IREPGNDPYAFLEF +H AA
Sbjct: 1 MGDESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMN+RVFLEKEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNRRVFLEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKG 180
Query: 181 -NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I D+RV
Sbjct: 181 PNEGAPSSKRVKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE---SENNSTLAQPSAPTTP 295
F++KGYAF++FTTKE A HAIE+ HNT+I+GHTVKCFWGKE +EN ST P+AP +
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGTENQSTTNPPAAPASM 300
Query: 296 QPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ 335
+ Q+PY Y Q MGYWY Q Y A + +YQ
Sbjct: 301 GAQT---QYPYAYQQGMGYWYTQ--GYPAIQGYMAPGYYQ 335
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/404 (61%), Positives = 290/404 (71%), Gaps = 21/404 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ QP TLYVGNLD +VTEELL A+F Q+G VKGCK+I EPGNDPY F+EF H AA+A
Sbjct: 8 NDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+ KEMKVNWA+SPGN PK DTS H+HIFVGDLSPEIET L++AFAPFG+I
Sbjct: 68 LLAMNKRLCFGKEMKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDI 127
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA-MTN 181
S+CR+VRDPQTLKSKGY FVSFVKKA+AENAI MNGQWLGSR+IRTNW+TRKPPA T
Sbjct: 128 SDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQ 187
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ TK +TFDEVYNQSSPTNCTVYCGG + L+EEL+ K FS +G I +IRVFK+
Sbjct: 188 AEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKD 247
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP--------- 292
KGYAF++F TKE ATHAI + HN+D+NG TVKC WGKE+ + + QP
Sbjct: 248 KGYAFIRFGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDPNNQQQPQVSPGDKHPSWP 307
Query: 293 --TTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQF-YQYGQLGYPQGYVGMV 349
P + A Q+ Y Y QQMGYWYPQ A Y Q Q Y YGQ Y QG+ G V
Sbjct: 308 EQRNPSAGNLATQYSYPY-QQMGYWYPQ-AGYPQVQGQFMQGVQYPYGQY-YGQGF-GSV 363
Query: 350 GRQVPGWQGIPGA-QPTAQQMAVAQA--QPSMMAAYAMQQFPTQ 390
G Q+ WQG+PG Q A Q +AQ QP M+ AY MQQ+ Q
Sbjct: 364 GMQM-AWQGLPGQPQVAAAQTPMAQGLQQPGMIGAYPMQQYQAQ 406
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/337 (69%), Positives = 258/337 (76%), Gaps = 4/337 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE LC LF QIG VKGCK+IREPGNDPYAFLEF HT A
Sbjct: 1 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAV 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM- 179
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I DIRV
Sbjct: 181 VNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPN 298
F++KGYAF++FTTKE A HAI + HNT+I+GHTVKCFWGKE+ + ++ P
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQSGNNSSAAPPAM 300
Query: 299 STAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ 335
++PY Y Q MGYWY Q Y A + +YQ
Sbjct: 301 GGQSRYPYPYQQGMGYWYAQ--GYPALQGYMAPGYYQ 335
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/351 (68%), Positives = 263/351 (74%), Gaps = 18/351 (5%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE LC LF QIG VKGCK+IREPGNDPYAFLEF HT A
Sbjct: 1 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAV 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM- 179
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I DIRV
Sbjct: 181 VNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE---SENNSTLAQPSAPTTP 295
F++KGYAF++FTTKE A HAI + HNT+I+GHTVKCFWGKE +EN S T P
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVP 300
Query: 296 QP----NSTAP-------QFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ 335
+S AP ++PY Y Q MGYWY Q Y A + +YQ
Sbjct: 301 DQSGNNSSAAPPAMGGQSRYPYPYQQGMGYWYAQ--GYPALQGYMAPGYYQ 349
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/336 (68%), Positives = 259/336 (77%), Gaps = 3/336 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE +C LF QIG VKGCK+IREPGNDPYAFLEF HT AA
Sbjct: 1 MGDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L++AFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPP+
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKP 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVF 239
NE + K TFDEVYNQSSPTN TVYCGGF + + E+L+ FS FG I D+RVF
Sbjct: 181 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF 240
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
++KGYAF++FTTKE A HAIE+ HNT+I+GH VKCFWGKE+ + +A P
Sbjct: 241 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKENGGGDNQSTNNATAAPPAMG 300
Query: 300 TAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ 335
Q+PY Y Q MGYWY Q Y A + +YQ
Sbjct: 301 AQTQYPYPYQQGMGYWYAQ--GYPALQGYMAPGYYQ 334
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/351 (68%), Positives = 265/351 (75%), Gaps = 18/351 (5%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE LC LF QIG VKGCK+IREPGNDPYAFLEF HT AA
Sbjct: 1 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM- 179
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I DIRV
Sbjct: 181 VNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE---SENNSTLAQPSAPTTP 295
F++KGYAF++FTTKE A HAIE+ HNT+I+GHTVKCFWGKE +EN S T P
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVP 300
Query: 296 QP----NSTAP-------QFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ 335
+S AP ++PY Y Q MGYWY Q Y A + +YQ
Sbjct: 301 DQSGNNSSAAPPAMGGQSRYPYPYQQGMGYWYAQ--GYPALQGYMAPGYYQ 349
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/397 (63%), Positives = 274/397 (69%), Gaps = 50/397 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE LC LF QIG VKGCK+IREPGNDPYAFLEF HT AA
Sbjct: 1 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM- 179
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I DIRV
Sbjct: 181 VNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE---SENNSTLAQPSAPTTP 295
F++KGYAF++FTTKE A HAIE+ HNT+I+GHTVKCFWGKE +EN S T P
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVP 300
Query: 296 QP----NSTAP-------QFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
+S AP Q+PY Y Q MGY GY QG
Sbjct: 301 DQSGNNSSAAPPAMGGQSQYPYPYQQGMGY-------------------------GYAQG 335
Query: 345 YVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAA 381
Y + G PG+ QQ A A + P AA
Sbjct: 336 YPALQGYMAPGYY---------QQYAAAYSNPQAAAA 363
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/319 (71%), Positives = 260/319 (81%), Gaps = 11/319 (3%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD +V+E+LLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 73 MSEESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAA 132
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FLEKEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIETQTLKEAFAPFG
Sbjct: 133 TALAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFG 192
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKK+EAE AI AMNGQWLGSRSIRTNWSTRKPP
Sbjct: 193 EISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPR 252
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ER R ++++K ++EV +YCGGF + +EL+ K FSPFGTI DIRVFK
Sbjct: 253 SERPRHSNNSKP-NYEEV----------LYCGGFTNGITDELIKKTFSPFGTIQDIRVFK 301
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGYAF+KFTTKE ATHAIES HNT+ING VKCFWGKE+ + +++ + Q +
Sbjct: 302 DKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAG 361
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+PY Y QQM YWYPQ
Sbjct: 362 AGQYPYGYGQQMSYWYPQG 380
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/281 (76%), Positives = 237/281 (84%), Gaps = 1/281 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE +C LF QIG VKGCK+IREPGNDPYAFLEF HT AA
Sbjct: 1 MGDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L++AFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPP+
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKP 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVF 239
NE + K TFDEVYNQSSPTN TVYCGGF + + E+L+ FS FG I D+RVF
Sbjct: 181 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF 240
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
++KGYAF++FTTKE A HAIE+ HNT+I+GH VKCFWGKE+
Sbjct: 241 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKEN 281
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 8 TTLYVGNLDVSV-TEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAM 66
TT+Y G +V TE+L+ FSQ G ++ +V R+ G YAF+ F AA A+ A
Sbjct: 207 TTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKG---YAFIRFTTKEAAAHAIEAT 263
Query: 67 NKRVFLEKEMKVNWASSPG 85
+ +K W G
Sbjct: 264 HNTEISGHIVKCFWGKENG 282
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/379 (60%), Positives = 270/379 (71%), Gaps = 24/379 (6%)
Query: 31 IGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
+G VKGCK+I EPGNDPY F+EF H AA+AL AMNKR+ KEMKVNWA+SPGN PK
Sbjct: 1 MGQVKGCKIIHEPGNDPYCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPGNTPKL 60
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
DTS H+HIFVGDLSPEIET L++AFAPFG+IS+CR+VRDPQTLKSKGY FVSFVKKA+A
Sbjct: 61 DTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADA 120
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPA-MTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
ENAI MNGQWLGSR+IRTNW+TRKPPA T + TK +TFDEVYNQSSPTNCTV
Sbjct: 121 ENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTV 180
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
YCGG + L+EEL+ K FS +G I +IRVFK+KGYAF+K TKE ATHAI + HN+D+NG
Sbjct: 181 YCGGITQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAIVATHNSDVNG 240
Query: 270 HTVKCFWGKESENNSTLAQPSA--------PTTPQ------PNSTAPQFPYIYNQQMGYW 315
TVKC WGKE+ + + QP P+ P+ P + A Q+ Y Y QQMGYW
Sbjct: 241 QTVKCSWGKEATDPNNQQQPQVSPGELSKHPSWPEQRNRSSPGNLATQYSYPY-QQMGYW 299
Query: 316 YPQAAAYTATAAQLPQQF-YQYGQLGYPQGYVGMVGRQVPGWQGIPGA-QPTAQQMAVAQ 373
YPQ A Y Q Q Y YGQ Y QG+ G VG Q+ WQG+PG Q A Q +AQ
Sbjct: 300 YPQ-AGYPQVQGQFMQGVQYPYGQY-YGQGF-GSVGMQM-AWQGLPGQPQVAAAQTPMAQ 355
Query: 374 A--QPSMMAAYAMQQFPTQ 390
QP M+ AY MQQ+ Q
Sbjct: 356 GLQQPGMIGAYPMQQYQAQ 374
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 106/231 (45%), Gaps = 34/231 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L + L F+ G + C+V+R+P + Y F+ FV A
Sbjct: 61 DTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADA 120
Query: 60 ATALAAMNKRVFLEKEMKVNWASS--PGNQPK-------------------QDTSNHYHI 98
A+ MN + + ++ NWA+ P N+ + Q + + +
Sbjct: 121 ENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTV 180
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
+ G ++ + + +++ F+ +G I R+ +D KGYAF+ K A +AI A +
Sbjct: 181 YCGGITQGLSEELMQKTFSSYGAIQEIRVFKD------KGYAFIKVGTKEAATHAIVATH 234
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNS---HTKTITFDEVYNQSSPTN 206
+ ++++ +W ++ N+++ Q S +K ++ E N+SSP N
Sbjct: 235 NSDVNGQTVKCSWG-KEATDPNNQQQPQVSPGELSKHPSWPEQRNRSSPGN 284
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/281 (77%), Positives = 235/281 (83%), Gaps = 2/281 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DES P TLYVGNLD SVTE LC LF IG VKGCK+IREPGNDPYAFLEF HT AA
Sbjct: 1 MGDESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKRV L+KEMKVNWA+SPGNQPK DTSNH+HIFVGDLSPEIET L+EAFAPFG
Sbjct: 61 TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM- 179
EISNCRIVRDPQTLKSKGYAFVSFVKKA+AE AI AMNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRV 238
NE + K TFDEVYNQSSPTN TVYCGGF + + EEL+ FS FG I DIRV
Sbjct: 181 VNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRV 240
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
F++KGYAF++FTTKE A HAIE+ HNT+I+GHTVKCFWG+
Sbjct: 241 FRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGER 281
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S ++VG+L + +L F+ G + C+++R+P + YAF+ FV A
Sbjct: 91 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 150
Query: 60 ATALAAMNKRVFLEKEMKVNWA---------------SSPGNQP------KQDTSNHYHI 98
A+ AMN + + ++ NW+ S QP Q + + +
Sbjct: 151 EAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTV 210
Query: 99 FVGDLSPEIETQTL-KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+ G + I T+ L + F+ FG+I + R+ RD KGYAF+ F K A +AI A
Sbjct: 211 YCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFTTKEAAAHAIEAT 264
Query: 158 NGQWLGSRSIRTNWSTRK 175
+ + +++ W R+
Sbjct: 265 HNTEISGHTVKCFWGERE 282
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/281 (72%), Positives = 232/281 (82%), Gaps = 2/281 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SVTEELLC LFSQ+G VK CK+IRE NDPYAF+E+ HT A
Sbjct: 1 MTEESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQ 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL+KE+KVNWA+SPGNQPK DTS HYHIFVGDLSPEIET+TL+EAFAPFG
Sbjct: 61 TALAAMNKRFFLKKEIKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKS+GYAFVSFVKKAEAENAI MNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPR 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVF 239
+ K S KT F+E+YN +SPTN TVYCGGF + + +EL+ K F+ FG I D RVF
Sbjct: 181 DNSKGIKS-GKTPGFEEIYNNTSPTNTTVYCGGFPPNTITDELIQKHFAQFGQIHDTRVF 239
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K+KGYAF++F KE+A AIE HN+++ GH VKC+WGKE+
Sbjct: 240 KDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKCYWGKEN 280
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 290/467 (62%), Gaps = 83/467 (17%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREA 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQAA--AYTATAAQLPQQFYQYG-------QLGYPQGYV----- 346
A Q+PY Y QQMGYWYP AA + Q +Y Y G P GY
Sbjct: 362 AAQYPYAY-QQMGYWYPPAAYPTTQMQTQYMQQGYYPYAYPTSAQQAGGVPAGYRMVPPN 420
Query: 347 ---GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G+ G VPG + A ++A P MM + AM Q+ TQ
Sbjct: 421 VAWGVPGTVVPGVTAAAASAAAAANGSLA---PQMMYSAAMPQYQTQ 464
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 288/467 (61%), Gaps = 83/467 (17%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQAA--AYTATAAQLPQQFYQYG-------QLGYPQGYV----- 346
A Q+PY Y QQMGYWYP A + Q +Y Y G P GY
Sbjct: 362 AAQYPYAY-QQMGYWYPPATYPTTQMQTQYMQQGYYPYAYPTSAQQAGGVPAGYRMVPPN 420
Query: 347 ---GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G+ G VPG + A ++A P MM + AM Q+ TQ
Sbjct: 421 VAWGVPGTVVPGVTAAAASAAAAANGSLA---PQMMYSAAMPQYQTQ 464
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/281 (70%), Positives = 230/281 (81%), Gaps = 2/281 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +E+ P TLYVGNLD SVTE+LLCALF Q+G VK CK+IRE +DPYAF+E+ +H A
Sbjct: 1 MTEEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQ 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR+FL+KE+KVNWA+SPGNQPK DTS H+HIFVGDLSPEIET+TL+EAFAPFG
Sbjct: 61 TALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKS+GYAFVSFVKKAEAENAI MNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPA-P 179
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF-GKDLNEELVSKVFSPFGTIVDIRVF 239
E + KT F+E+YN + PTN TVYCGGF +N+ L+ K F FG I D+RVF
Sbjct: 180 RENIKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVF 239
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K+KGYAF+KF KE+A AIE HN++I G+ VKC+WGKE+
Sbjct: 240 KDKGYAFIKFNNKESAARAIEGTHNSEIQGYAVKCYWGKEN 280
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/476 (50%), Positives = 289/476 (60%), Gaps = 101/476 (21%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALF +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FL+KE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQAA------------------AYTATAAQLPQQFYQYGQLGYP 342
A Q+PY Y QQMGYWYP AA AYT +A Q G P
Sbjct: 362 AAQYPYAY-QQMGYWYPPAAYPTTQMQTQYMQQGYYPYAYTTSAQQAG---------GVP 411
Query: 343 QGYV--------GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
GY G+ G VPG + A ++A P MM + AM Q+ TQ
Sbjct: 412 AGYRMVPPNVAWGVPGTVVPGVTAAAASAAAAANGSLA---PQMMYSAAMPQYQTQ 464
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/476 (50%), Positives = 289/476 (60%), Gaps = 101/476 (21%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALF +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FL+KE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAVAAANAAVAAGAAMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQAA------------------AYTATAAQLPQQFYQYGQLGYP 342
A Q+PY Y QQMGYWYP AA AYT +A Q G P
Sbjct: 362 AAQYPYAY-QQMGYWYPPAAYPTTQMQTQYMQQGYYPYAYTTSAQQAG---------GVP 411
Query: 343 QGYV--------GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
GY G+ G VPG + A ++A P MM + AM Q+ TQ
Sbjct: 412 AGYRMVPPNVAWGVPGTVVPGVTAAAASAAAAANGSLA---PQMMYSAAMPQYQTQ 464
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/286 (69%), Positives = 231/286 (80%), Gaps = 2/286 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M DE+ P TLYVGNLD SVTE+LLCALF Q+G VK CK+IRE +DPYAF+E+ H A
Sbjct: 1 MTDEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQ 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR+FL+KE+KVNWA+SPGNQPK DTS H+HIFVGDLSPEIET+TL+EAFAPFG
Sbjct: 61 TALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI MNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPA-P 179
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVF 239
E + KT F+E+YN + PTN TVYCGGF + +++ L+ F FG+I D+RVF
Sbjct: 180 RENTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVF 239
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
K+KGYAF+KF +KE A AIE HN+++ GH VKC+WGKE+ T
Sbjct: 240 KDKGYAFIKFISKEAAARAIEGTHNSEVQGHPVKCYWGKENGGEMT 285
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D SQ ++VG+L + E L F+ G + C+++R+P + YAF+ FV A
Sbjct: 91 DTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSN-------------------HYHIFV 100
A+ MN + + ++ NW++ P+++T + ++
Sbjct: 151 ENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTGPTNTTVYC 210
Query: 101 GDLSPE-IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
G P I +K F FG I + R+ +D KGYAF+ F+ K A AI +
Sbjct: 211 GGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFISKEAAARAIEGTHN 264
Query: 160 QWLGSRSIRTNWSTRKPPAMTN 181
+ ++ W MT+
Sbjct: 265 SEVQGHPVKCYWGKENGGEMTH 286
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 258/379 (68%), Gaps = 63/379 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+PY Y QQMGYWYP A
Sbjct: 362 AAQYPYAY-QQMGYWYPPA 379
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 258/379 (68%), Gaps = 63/379 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAATAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+PY Y QQMGYWYP A
Sbjct: 362 AAQYPYAY-QQMGYWYPPA 379
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/364 (59%), Positives = 257/364 (70%), Gaps = 55/364 (15%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPP---- 177
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVFKE 241
R+ S K EVYNQSSPTN TVYCGGF + ++++L+ K F FG I D+RVFK+
Sbjct: 178 -PREPS--KXXXXXEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD 234
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST---------------- 285
KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 235 KGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAAAAAAASAN 294
Query: 286 --------------------------LAQPSAPTTP----QPNSTAPQFPYIYNQQMGYW 315
+A + P P A Q+PY Y QQMGYW
Sbjct: 295 VAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAY-QQMGYW 353
Query: 316 YPQA 319
YP A
Sbjct: 354 YPPA 357
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/478 (51%), Positives = 286/478 (59%), Gaps = 105/478 (21%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+EELL ALF +G VK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDPQT+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRES 181
Query: 183 RKRQNSHTKTI---------------TFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K TFDEVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN--- 283
F FG I D+RVFK+KG+AF+KF TK++A HAIE HNT+++G+ VKCFWGKE+ +
Sbjct: 242 FGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGKENGGDNSM 301
Query: 284 ------------------------------------------STLAQPSAPTTPQPNSTA 301
+ A P TPQ + A
Sbjct: 302 NNMNAAAAAAASANVAAVAAANAAVSAALPGQMMTQQQLAAATGAALPGQMMTPQQLAAA 361
Query: 302 PQFPYIYN-QQMGYWYPQAA------------------AYTATAAQLPQQFYQYGQLGYP 342
Y Y QQMGYWYP AA AYT +A Q G P
Sbjct: 362 TAAQYPYAYQQMGYWYPPAAYPTTQMQTQYMQQGYYPYAYTTSAQQAG---------GVP 412
Query: 343 QGYVGMVGRQVP---GWQGIPGA-------QPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
GY R VP W G+PG +A A P MM + AM Q+ TQ
Sbjct: 413 AGY-----RMVPPNVAW-GVPGTVVPGMSAASSAAAAANGSLAPQMMYSAAMPQYQTQ 464
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/281 (69%), Positives = 231/281 (82%), Gaps = 2/281 (0%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD SVTEELLC LFSQ+G VK CK+IRE DP+AF+E+ +H A
Sbjct: 1 MTEESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQ 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR+FL+KE++VNWA+S GNQPK DTS H+HIFVGDLSPEI+T+TL+EAFAPFG
Sbjct: 61 TALAAMNKRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFG 120
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
EISNCRIVRDPQTLKS+GYAFVSFVKKAEAENAI MNGQWLGSRSIRTNWSTRKPPA
Sbjct: 121 EISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPA-P 179
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKVFSPFGTIVDIRVF 239
E + KT F+E+YN +SPTN TVYCGGF + + +EL+ K F+ FG I D RVF
Sbjct: 180 RENSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVF 239
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K+KGYAF++F +KE+A AIE HN+++ GH VKC+WGKE+
Sbjct: 240 KDKGYAFIRFASKESAARAIEGTHNSEVQGHPVKCYWGKEN 280
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/379 (56%), Positives = 256/379 (67%), Gaps = 63/379 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI AMN QW+ SRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPREP 181
Query: 183 RKRQNSH---------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSKV 226
K ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 SKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKH 241
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST- 285
F FG I D+RVFK+KG++F+KF TKE A HAIE HN++++G+ VKCFWGKE+ +++
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSA 301
Query: 286 -----------------------------------------LAQPSAPTTP----QPNST 300
+A + P P
Sbjct: 302 NNLNAAAAAAAASANVAAAVAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Query: 301 APQFPYIYNQQMGYWYPQA 319
A Q+PY Y QQMGYWYP A
Sbjct: 362 AAQYPYAY-QQMGYWYPPA 379
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 231/295 (78%), Gaps = 17/295 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALF ++GPVK CK+IREPGNDPYAF+E+ ++ A TA
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRVFLEKE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRVFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDPQT+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRES 181
Query: 183 RKRQNSHTKTI----------------TFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSK 225
K TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 TKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 241
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
F FG I D+RVFKEKG+AF+KF TKE A AIE H ++++G VKCFWGKE+
Sbjct: 242 HFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGKEN 296
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/296 (66%), Positives = 234/296 (79%), Gaps = 18/296 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALF ++GPVK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRVFL+KE+KVNWA+SPGN PK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDPQT+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRES 181
Query: 183 RKRQNS-----------------HTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVS 224
K + TF+EVYNQSSPTN TVYCGGF + +++EL+
Sbjct: 182 SKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMH 241
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K F FG I D+RVFK+KG+AF+KF +KE A AIE HN++++G+ VKCFWGKE+
Sbjct: 242 KHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWGKEN 297
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 236/295 (80%), Gaps = 17/295 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALFS +G VK CK+IREPGNDPYAF+E+ + A TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKR+FL+KE+KVNWA+SPGNQPK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMT 180
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAITAMNGQW+GSRSIRTNWSTRK PP
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 181 NERKRQNSH--------------TKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELVSK 225
N+ Q ++ TF+EVYNQSSPTN TVYCGGF + ++++L+ K
Sbjct: 182 NKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 241
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
F FG I D+RVFK+KG+AF+KF TKE A AIE HN++++G+ VKCFWGKE+
Sbjct: 242 HFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGKEN 296
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/297 (66%), Positives = 233/297 (78%), Gaps = 19/297 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD +V+EELL ALF ++GPVK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRVFL+KE+KVNWA+SPGN PK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDPQT+KSKGYAFVSFVKKAEAENAI AMNGQW+GSRSIRTNWSTRK P
Sbjct: 122 SNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRES 181
Query: 183 RKRQN------------------SHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELV 223
K + + TF+EVY+QSSPTN TVYCGGF +++EL+
Sbjct: 182 SKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDELM 241
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K F FG I D+RVFK+KG+AF+KF KE A AIE HNT+++G+ VKCFWGKE+
Sbjct: 242 HKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFWGKEN 298
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/297 (65%), Positives = 234/297 (78%), Gaps = 19/297 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
DESQP TLYVGNLD SV+E+LL ALF ++GPVK CK+IREPGNDPYAF+E+ ++ A+TA
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRVFL+KE+KVNWA+SPGN PK D S+H+HIFVGDLSPEIET+TL+EAFAPFGEI
Sbjct: 62 LTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
SNCRIVRDP T+KSKGYAFVSFVKKAEAENAI +MNGQW+GSR+IRTNWSTRK P
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRES 181
Query: 183 RKRQN------------------SHTKTITFDEVYNQSSPTNCTVYCGGFGKD-LNEELV 223
K + + TF+EVYNQSSPTN TVYCGGF + +++EL+
Sbjct: 182 SKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELM 241
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
K F FG I D+RVFK+KG+AF+KF TKE A AIE HN++++G+ VKCFWGKE+
Sbjct: 242 HKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGKEN 298
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/359 (58%), Positives = 256/359 (71%), Gaps = 27/359 (7%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRV 70
YVGNLD SVTEEL+ LF QIG VKGCK+I EPG++PY F+EF H AA ALAAMNKR
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHEPYCFVEFAEHHSAAAALAAMNKRN 60
Query: 71 FLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRD 130
+ +EMKVNWA+SPGN PKQDTS H+HIFVGDLSPEIET TL++AFA FGEIS+CR+VRD
Sbjct: 61 CMGREMKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRD 120
Query: 131 PQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHT 190
PQTLKSKGY FVSFVKK++AENAI MNGQWLG+R+IRTNW+TRKPPA +++ +
Sbjct: 121 PQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPA------PKDAGS 174
Query: 191 KTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFT 250
K ++++EV+ QSS TNCTVYCG + EE + K+F P+G I +IRVFK+KGYAF++F
Sbjct: 175 KPMSYEEVFGQSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFA 234
Query: 251 TKETATHAIESIHNTDINGHTVKCFWGKE-----SENNSTLAQPSAPTTPQPNSTAPQFP 305
+KE+AT AI S+HNTD+NG VKC WGKE S NN+ L T T Q+P
Sbjct: 235 SKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQL------MTGGLGPTNTQYP 288
Query: 306 YIYNQQMGYWYPQAAAYTATAAQLPQQFYQ----YGQLGYPQGYVGMVGRQVP-GWQGI 359
Y YNQ M YWYP Q+ QF Q Y G GY +G Q+P GWQ +
Sbjct: 289 YGYNQGMSYWYP-----GGYPPQMQSQFVQGMQGYAAYGQFAGYQPGMGMQLPGGWQSV 342
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L + L F+ G + C+V+R+P + Y F+ FV + A
Sbjct: 81 DTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDA 140
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK--------------QDTSNHYHIFVGDLSP 105
A+A MN + + ++ NWA+ PK Q +S + ++ G+L+
Sbjct: 141 ENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGNLAQ 200
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ L++ F P+G+I R+ +D KGYAF+ F K A AI +++ L +
Sbjct: 201 GSTEEALQKIFGPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVSVHNTDLNGQ 254
Query: 166 SIRTNWS 172
+++ +W
Sbjct: 255 NVKCSWG 261
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/284 (65%), Positives = 216/284 (76%), Gaps = 10/284 (3%)
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQT 133
KEMK+NW SSPG Q K DTS H+HIFVGDLSPEIETQTL+EAFAPFGEIS+CR+VRDPQT
Sbjct: 73 KEMKLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQT 132
Query: 134 LKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTI 193
LKSKGY FVSF+KKAEAE+AI AMNGQWLGSRSIRTNW+TRKPP + + +S+TK +
Sbjct: 133 LKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTL-----KTDSNTKPL 187
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
TFDEVYNQSSPTNCTVYCGG L +ELV K F+PFG I +IRVFK+KGYAFV+F TKE
Sbjct: 188 TFDEVYNQSSPTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKE 247
Query: 254 TATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYI---YNQ 310
+ATHAI ++HN+DING VKC WGKES S + Q ++ QFPY Y Q
Sbjct: 248 SATHAIVAVHNSDINGQPVKCSWGKESGEPIVSQNASQVCSSQAALSSTQFPYTAAAYGQ 307
Query: 311 QMGYWYPQAAAYTATAAQLPQ--QFYQYGQLGYPQGYVGMVGRQ 352
Q+GYWYPQ+ T Q Q Q Y YGQ GY QGY+G +G Q
Sbjct: 308 QLGYWYPQSYPATQLQGQFLQGVQGYTYGQFGYQQGYLGRMGMQ 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L + + L F+ G + C+V+R+P + Y F+ F+ A
Sbjct: 90 DTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 149
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS---------------NHYHIFVGDLS 104
+A+AAMN + + ++ NWA+ K D++ + ++ G L+
Sbjct: 150 ESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLT 209
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ + +++ FAPFG I R+ +D KGYAFV F K A +AI A++ +
Sbjct: 210 SGLTDELVQKTFAPFGNIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNSDING 263
Query: 165 RSIRTNWSTRKPPAMTNERKRQ 186
+ ++ +W + ++ Q
Sbjct: 264 QPVKCSWGKESGEPIVSQNASQ 285
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/273 (63%), Positives = 212/273 (77%), Gaps = 4/273 (1%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRV 70
YVGNLD +VTE+LL ALF IGP KGCK+I E GN+PYAF+EF H+ AA AL MNKR
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNEPYAFVEFSEHSSAALALGTMNKRT 60
Query: 71 FLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRD 130
+EMKVNWA+SPG Q KQDTS H+HIFVGDLSP+IET L+EAF PFG IS+C+I+RD
Sbjct: 61 CFGREMKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRD 120
Query: 131 PQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHT 190
PQTLKSKGY FVS+V++ EAENAI +MNGQW+GSR+IRTNW+ RKP A + ++
Sbjct: 121 PQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPAT----KETNA 176
Query: 191 KTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFT 250
+ +TFDEV+ +SSPTNCTVYCGG L E+LV F G I +IRVFK+KGYAF+++
Sbjct: 177 QPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIRYN 236
Query: 251 TKETATHAIESIHNTDINGHTVKCFWGKESENN 283
TKE AT AI +H T++ GHTVKC WGKES+++
Sbjct: 237 TKEAATEAIVKMHQTEVGGHTVKCSWGKESKDS 269
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L + L F G + CK+IR+P + Y F+ +V A
Sbjct: 81 DTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEA 140
Query: 60 ATALAAMNKRVFLEKEMKVNWA----SSPGN-----QP-------KQDTSNHYHIFVGDL 103
A+ +MN + + ++ NWA ++P QP K+ + + ++ G +
Sbjct: 141 ENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGI 200
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ ++ AF G+I R+ +D KGYAF+ + K A AI M+ +G
Sbjct: 201 LSGLTEDLVRSAFGEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMHQTEVG 254
Query: 164 SRSIRTNWS--TRKPPAMTN 181
+++ +W ++ PA N
Sbjct: 255 GHTVKCSWGKESKDSPADPN 274
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 226/321 (70%), Gaps = 29/321 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D QP TLYVGNLD VTE+L+CALFSQ+G +KGCK+I EPG+DPY F+EFV+H+ A++A
Sbjct: 8 DGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
+ AMN R+ L +E++VNWASS Q + DTS H+HIFVGDLSP+IET L+EAF+PF
Sbjct: 68 ITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAFSPF 127
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
GEIS+CR+V+D T KSKGY FVSF K +AENAI M+G WLGSR+IRTNW++RKP
Sbjct: 128 GEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKP--- 184
Query: 180 TNERKRQN---SHTKTITFDEVYNQSSPTNCTVYCGGFGK-DLNEELVSKVFSPFGTIVD 235
N ++ + H + + +DEV+ QSSP+NCTVYCGG + +E+ + + F FG IVD
Sbjct: 185 -NHKETGSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVD 243
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
IR+FK+KGYAF+KF +KE+A AI + HN+DI G VKC WGKE E
Sbjct: 244 IRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGKEQE-------------- 289
Query: 296 QPNSTAPQFPYIYNQQMGYWY 316
PQFPY QM YWY
Sbjct: 290 ---PAQPQFPYD-PYQMNYWY 306
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
QD ++VG+L + + F+ G+I C+I+ +P S Y FV FV ++
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEP---GSDPYCFVEFVNHSD 63
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
A +AITAMN + R +R NW++ T R + H +
Sbjct: 64 ASSAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHH-----------------I 106
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIH 263
+ G + + + FSPFG I D RV K+ KGY FV FT K+ A +AI ++
Sbjct: 107 FVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMD 166
Query: 264 NTDINGHTVKCFWGKESENN 283
+ + ++ W N+
Sbjct: 167 GSWLGSRAIRTNWASRKPNH 186
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 233/346 (67%), Gaps = 19/346 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA+
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAS 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++D+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ P + Q N
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET--------PDMISPVQQNQIG 289
Query: 302 PQFPYIYNQQMGYWY--PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 290 --YPQAYG-QWGQWYGNAQLGQYVPNGWQVP-AYGMYGQAWNQQGF 331
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/387 (51%), Positives = 246/387 (63%), Gaps = 19/387 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DES P TLYVGNL VTE L+ LF+QIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T ++ AFAPF
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTDDIRAAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q++ K + FDEV NQSSP NCTVYCGG L E L+ + FSPFG I++IRVF
Sbjct: 179 --PKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+F++F++ E+A HAI S++ T I GH VKC+WGKES + + Q P
Sbjct: 237 PEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQ------PMEYG 290
Query: 300 TAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQGI 359
Q+ +Y Y Y Q+P + YGQ QG+ G+ Q P W G
Sbjct: 291 QWGQWNQMYGNPQQY-----GQYMTNGWQVP-SYGMYGQTWNQQGF-GVEQSQSPAWVGG 343
Query: 360 PGAQPT-AQQMAVAQAQPSMMAAYAMQ 385
G QP+ AQ AV MA Y Q
Sbjct: 344 FGTQPSQAQPGAVMNQANFGMAGYQTQ 370
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/349 (53%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LF QIGP K CK+I + GNDPY F+EF H A
Sbjct: 1 MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A +LAAMN R + KE+KVNWA+SP +Q K+DTSNH+H+FVGDLSPEI T ++ AFAPF
Sbjct: 61 AASLAAMNGRKIMGKEVKVNWATSPSSQ-KKDTSNHFHVFVGDLSPEITTDDIRAAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ ++TK ++FDEV NQSSP+NCTVYCGG L E+L+ + FSPFG I+++RVF
Sbjct: 179 --PKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F + E+A HAI S++ T + GH VKC+WGKE+ + + Q
Sbjct: 237 PDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTDMVSPMQQVQVPQQSKVG 296
Query: 300 TAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
A Q PY Q G WY Q + Y Q+P + YGQ QG+
Sbjct: 297 FAAQ-PY---GQWGQWYGNAQQISQYVPNGWQVP-TYGVYGQAWNQQGF 340
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/370 (51%), Positives = 243/370 (65%), Gaps = 28/370 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M ++ QP TLYVGNL VTE L+ +F+QIGP K CK+I + GNDPY F+EF H A
Sbjct: 1 MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A +LAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AF PF
Sbjct: 61 AASLAAMNGRKIMGKEVKVNWATTPTSQ-KKDTSNHFHVFVGDLSPEITTEDVKAAFGPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ +++K ++FDEV NQSSP+NCTVYCGG L E+L+ + FSPFG I+++RVF
Sbjct: 179 --PKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN--NSTLAQPSAPTTPQP 297
+KGY+FV+F + E+A HAI S++ + I GH VKC+WGKE+ + NS P PQ
Sbjct: 237 PDKGYSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMP----VPQQ 292
Query: 298 NST--APQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQ 352
N A PY Q G WY PQ Y Q+P + YGQ QG+
Sbjct: 293 NKMGFAAAQPY---GQWGQWYGNGPQIGQYVPNGWQVP-TYGVYGQAWNQQGF-----NH 343
Query: 353 VP---GWQGI 359
+P GW G+
Sbjct: 344 LPASAGWTGM 353
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 250/399 (62%), Gaps = 37/399 (9%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q + TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 179 --PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES P+
Sbjct: 237 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES----------------PDM 280
Query: 300 TAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQV 353
T F + Q G W Q Y A Q+P + YGQ QG+ G+
Sbjct: 281 TK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQAWNQQGF-GVDQSPS 337
Query: 354 PGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
W G GAQP A QA P + A Y M + TQ
Sbjct: 338 AAWMGGFGAQP-----AQGQAAPVIPNQAGYGMASYQTQ 371
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 235/362 (64%), Gaps = 16/362 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
D+ QP TLYVGNL VTE L+ LF QIGP K CK+I + G+DPY F+EF H A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+AAMN R L KE+KVNWA++P +Q K+DTS+H+H+FVGDLSPEI T +K AFAPFG+
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQ-KKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
IS+CR+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKP P T
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
NE +S +K ++FDEV NQSSP+NCTVYCGG L E+++ + FSPFG I++IRVF
Sbjct: 181 NE----SSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFP 236
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
EKGY+FV+F + E A HAI S++ T I G+ VKC+WGKE+ + + Q P +
Sbjct: 237 EKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD---MVQGPIQQVPMAQQS 293
Query: 301 APQFPYIYNQQMGYWYP---QAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQ 357
F Q G WY Q Y Q+P + YGQ QGY + GW
Sbjct: 294 TLGFAAQPYNQWGQWYGNTQQIGQYVPNGWQVP-SYGVYGQTWDQQGYNHL--HAGAGWT 350
Query: 358 GI 359
G+
Sbjct: 351 GM 352
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/393 (50%), Positives = 248/393 (63%), Gaps = 27/393 (6%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DES P TLYVGNL VTE L+ LF+QIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T ++ AFAPF
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTDDIRAAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAP 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
N Q++ K + +++V NQSSP NCTVYCGG L++ L+ + FSPFG I++IRVF
Sbjct: 180 KNT---QDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+F++F++ E+A HAI S++ T I GH VKC+WGKES + + QP
Sbjct: 237 PEKGYSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKESPDMAKTVQP---------- 286
Query: 300 TAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQV 353
Q Y Q G+W Q Y Q+P + YGQ QG+ G+ Q
Sbjct: 287 VTEQVDY---GQWGHWNQVYGNPQQYGQYMTNGWQVP-SYGMYGQTWNQQGF-GVEQSQS 341
Query: 354 PGWQGIPGAQPTAQQMAVAQAQPSM-MAAYAMQ 385
P W G G QP+ Q Q + MA Y Q
Sbjct: 342 PAWVGGFGTQPSQAQPGPVMNQANFGMAGYQTQ 374
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 202/267 (75%), Gaps = 10/267 (3%)
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ S H+HIFVGDLSPEIETQTL+EAFAPFGEIS+CR+VRDPQTLKSKGY FVSF+KKAEA
Sbjct: 57 NKSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 116
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
E+AI AMNGQWLGSRSIRTNW+TRKPP + + +S+TK +TFDEVYNQSSPTNCTVY
Sbjct: 117 ESAIAAMNGQWLGSRSIRTNWATRKPPTL-----KTDSNTKPLTFDEVYNQSSPTNCTVY 171
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGG L +ELV K F+PFG I +IRVFK+KGYAFV+F TKE+ATHAI ++HN+DING
Sbjct: 172 CGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDINGQ 231
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYI---YNQQMGYWYPQAAAYTATAA 327
VKC WGKES S + Q ++ QFPY Y QQ+GYWYPQ+ T
Sbjct: 232 PVKCSWGKESGEPIVSQNASQVCSSQAALSSTQFPYTAAAYGQQLGYWYPQSYPATQLQG 291
Query: 328 QLPQ--QFYQYGQLGYPQGYVGMVGRQ 352
Q Q Q Y YGQ GY QGY+G +G Q
Sbjct: 292 QFLQGVQGYTYGQFGYQQGYLGRMGMQ 318
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 24/187 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
++S+ ++VG+L + + L F+ G + C+V+R+P + Y F+ F+ A
Sbjct: 57 NKSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 116
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS---------------NHYHIFVGDLS 104
+A+AAMN + + ++ NWA+ K D++ + ++ G L+
Sbjct: 117 ESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLT 176
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ + +++ FAPFG I R+ +D KGYAFV F K A +AI A++ +
Sbjct: 177 SGLTDELVQKTFAPFGNIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNSDING 230
Query: 165 RSIRTNW 171
+ ++ +W
Sbjct: 231 QPVKCSW 237
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 244/394 (61%), Gaps = 41/394 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
D++ P TLYVGNLD VTE + LF QIGP K CK+I E GNDPY F+EFV H+ AA
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL MN R+ L KE+KVNWA++P + K+DTSNH+H+FVGDLS E++T LK AFAPFG+
Sbjct: 69 ALQTMNGRMILGKEVKVNWATTPSSM-KKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQ 127
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D QT KSKGY FVSF+ K +AENAI MNGQWL R+IRTNW+TRKPP
Sbjct: 128 ISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPP--- 184
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
RQ TK +++D+V N SS TN TVY GG L E + + FS +G I ++R+F +
Sbjct: 185 --PRQPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPD 242
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGYAF++F T E+A HAI S++ + INGH VKC WGKES + AQP+
Sbjct: 243 KGYAFIRFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLYQAQPNT---------- 292
Query: 302 PQFPYIYNQQMGYW------------YPQAAAYTATAAQLPQQFYQYGQLGYPQGYVG-- 347
+P YN Q G W Q Y AA +PQQ Y YPQ Y G
Sbjct: 293 --YPGYYNYQQGQWNQYYQQYATQQPQVQPQQYMGGAAAVPQQSSYY----YPQ-YQGPN 345
Query: 348 -MVGRQVPGWQGIPGAQPTA--QQMAVAQAQPSM 378
MVG +P G QPT Q A Q QP+M
Sbjct: 346 VMVGYNMPAGYGAQAGQPTLTQQSYAAGQQQPTM 379
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 234/362 (64%), Gaps = 16/362 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
D+ QP TLYVGNL VTE L+ LF QIGP K CK+I + G+DPY F+EF H A
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+AAMN R L KE+KVNWA++P +Q K+DTS+H+H+FVGDLSPEI T +K AFAPFG+
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQ-KKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
IS+CR+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKP P T
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+E ++TK ++FDEV NQSSP+NCTVYCGG L E+++ + FSPFG I++IRVF
Sbjct: 181 SE----TTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFP 236
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
EKGY+FV+F + E A HAI S++ T I G+ VKC+WGKE+ + Q +
Sbjct: 237 EKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVQGPIQQVQMAQQNTVS 296
Query: 301 APQFPYIYNQQMGYWYP---QAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQ 357
PY Q G WY Q Y Q+P + YGQ QGY + GW
Sbjct: 297 FAAQPY---SQWGQWYSNTQQIGQYVPNGWQVP-SYGVYGQTWDQQGYNHL--HAGAGWT 350
Query: 358 GI 359
G+
Sbjct: 351 GV 352
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 186/351 (52%), Positives = 239/351 (68%), Gaps = 17/351 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVA 59
M DE QP TLYVGNL VTE L+ +FSQIGP K CK+I + GNDPY F+EF + A
Sbjct: 2 MMDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L K+MKVNWAS+P +Q K+DTSNH+H+FVGDLSPEI T ++ AFAPF
Sbjct: 62 AAALAAMNGRKILGKDMKVNWASTPSSQ-KKDTSNHFHVFVGDLSPEISTDDVRAAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+VRD T KSKGY F+SF+ K +AE+AI MNGQWLG R IRTNW+TRKP A
Sbjct: 121 GKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ + + +K ++++EV NQSSP+NCTVYCGG L+++L+ + FSPFG I++IRVF
Sbjct: 180 -PKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVF 238
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+FV+F + E A HAI S++ T I GHTVKC+WGKE+ + ++ Q P +P
Sbjct: 239 PEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQNKPTY 298
Query: 300 TAPQF-----PYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
A + Y QQMG + P Q+P + YGQ QGY
Sbjct: 299 AAQPYGQWGQSYGNGQQMGQYVP-------NGWQMP-TYGVYGQAWNQQGY 341
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/365 (51%), Positives = 245/365 (67%), Gaps = 22/365 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ QP TLYVGNL VTE L+ +F+QIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+LAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 SLAAMNGRKIMGKEVKVNWATTPTSQ-KKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S++K ++F+EV +QSSP+NCTVYCGG L E+L+ + FS FG I+++RVF +
Sbjct: 178 PKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES-ENNSTLAQPSAPTTPQPNST 300
KGY+FV+F + E+A HAI S++ T I+GH VKC+WGKE+ + +++ Q S P +
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKETPDMMNSMQQMSIPQQNKIGFP 297
Query: 301 APQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVP--- 354
A Q PY Q G WY PQ + Y Q+P YG Y QG+ +P
Sbjct: 298 AAQ-PY---GQWGQWYGNGPQISQYVPNGWQVP----TYGV--YSQGWNQQGFNHLPASA 347
Query: 355 GWQGI 359
GW G+
Sbjct: 348 GWTGM 352
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/399 (51%), Positives = 247/399 (61%), Gaps = 34/399 (8%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES P+
Sbjct: 238 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES----------------PDM 281
Query: 300 TAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQV 353
T F + Q G W Q Y A Q+P YG G P G Q
Sbjct: 282 TK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP----PYGVYGQPWNQQGFGVDQS 336
Query: 354 P--GWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
P W G GAQP Q P A Y M FPTQ
Sbjct: 337 PSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ 375
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 250/416 (60%), Gaps = 54/416 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q + TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 180 GGRQIRTNWATRKPPA---PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES-- 294
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQY 336
P+ T F + Q G W Q Y A Q+P + Y
Sbjct: 295 --------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMY 338
Query: 337 GQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
GQ QG+ G+ W G GAQP A QA P + A Y M + TQ
Sbjct: 339 GQAWNQQGF-GVDQSPSAAWMGGFGAQP-----AQGQAAPVIPNQAGYGMASYQTQ 388
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 239/351 (68%), Gaps = 17/351 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVA 59
M DE QP TLYVGNL VTE L+ +FSQIGP K CK+I + GNDPY F+EF + A
Sbjct: 2 MMDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L K+MKVNWAS+P +Q K+DTSNH+H+FVGDLSPEI T ++ AFAPF
Sbjct: 62 AAALAAMNGRKILGKDMKVNWASTPSSQ-KKDTSNHFHVFVGDLSPEISTDDVRAAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY F+SF+ K +AE+AI MNGQWLG R IRTNW+TRKP A
Sbjct: 121 GKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ + + +K ++++EV NQSSP+NCTVYCGG L+++L+ + FSPFG I++IRVF
Sbjct: 180 -PKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVF 238
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+FV+F + E A HAI S++ T I GHTVKC+WGKE+ + ++ Q P +P
Sbjct: 239 PEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQNKPTY 298
Query: 300 TAPQF-----PYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
A + Y QQMG + P Q+P + YGQ QGY
Sbjct: 299 AAQPYGQWGQSYGNGQQMGQYVP-------NGWQMP-TYGVYGQAWNQQGY 341
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 250/416 (60%), Gaps = 54/416 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQH 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 180 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES-- 294
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQY 336
P+ T F + Q G W Q Y A Q+P + Y
Sbjct: 295 --------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMY 338
Query: 337 GQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
GQ QG+ G+ W G GAQP A Q P + A Y M + TQ
Sbjct: 339 GQAWNQQGF-GVDQSPSAAWMGGFGAQP-----AQGQGAPVIPNQAGYGMASYQTQ 388
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 234/362 (64%), Gaps = 16/362 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ QP TLYVGNL VTE L+ +F+QIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+LAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T +K AF PFG
Sbjct: 62 SLAAMNGRKIMGKEVKVNWATTPTSQ-KKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S++K + FD+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ + I GH VKC+WGKE+ + Q P P
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGKETPDMMNTMQ----QMPMPQQNK 293
Query: 302 PQFPYIY-NQQMGYWYP---QAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQ 357
FP Q G WY Q + Y Q+P + YG QG+ + GW
Sbjct: 294 MSFPAAQPYGQWGQWYGNGHQISQYVPNGWQVP-TYGVYGHAWNQQGFNHLPASA--GWT 350
Query: 358 GI 359
G+
Sbjct: 351 GM 352
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 211/281 (75%), Gaps = 5/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 229/310 (73%), Gaps = 28/310 (9%)
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ + H+HIFVGDLSPEIETQTL+EAFA FGEIS+CR+VRDPQTLKSKGY FVSF+KKAEA
Sbjct: 46 NKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIKKAEA 105
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
E+AI AMNGQWLGSRSIRTNW+TRKPPA +E +++K ++FDE+YNQSS TNCTVY
Sbjct: 106 ESAINAMNGQWLGSRSIRTNWATRKPPAPKSE-----ANSKPMSFDEIYNQSSATNCTVY 160
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGG L E+L+ K F P+G I +IRVFKEKGYAF++F+TKE+ATHAI +HN++I G
Sbjct: 161 CGGITNGLCEDLLQKTFLPYGIIQEIRVFKEKGYAFIRFSTKESATHAIVGVHNSEIGGQ 220
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY-IYNQQMGYWYPQAAAYTATAAQL 329
TVKC WGKES + + +AP Q T+ Q+PY Y QQ+GYWYPQ+ TA AAQ+
Sbjct: 221 TVKCSWGKESGDPN-----NAPAASQ-ALTSTQYPYGAYGQQLGYWYPQSFP-TAAAAQM 273
Query: 330 PQQF------YQYGQL-GYPQGYVGMVGRQVPG-WQGIPG-AQPTAQQMAVAQA---QPS 377
QF Y YGQ GY Q Y+GM G QVP WQGIPG Q AQQMA A QP
Sbjct: 274 QGQFLQGMQGYTYGQFAGYQQSYMGM-GMQVPATWQGIPGQPQLPAQQMAAPSAALQQPG 332
Query: 378 MMAAYAMQQF 387
++ + +QQ+
Sbjct: 333 LV--FPIQQY 340
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ A +A+ AM
Sbjct: 53 IFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIKKAEAESAINAM 112
Query: 67 NKRVFLEKEMKVNWASSPGNQPK---------------QDTSNHYHIFVGDLSPEIETQT 111
N + + ++ NWA+ PK Q ++ + ++ G ++ +
Sbjct: 113 NGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYNQSSATNCTVYCGGITNGLCEDL 172
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
L++ F P+G I R+ K KGYAF+ F K A +AI ++ +G ++++ +W
Sbjct: 173 LQKTFLPYGIIQEIRV------FKEKGYAFIRFSTKESATHAIVGVHNSEIGGQTVKCSW 226
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 211/281 (75%), Gaps = 5/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 211/281 (75%), Gaps = 5/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/397 (49%), Positives = 254/397 (63%), Gaps = 22/397 (5%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DE+ P TLYVGNL VTE L+ LF+QIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MDDETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDL+PEI T+ ++ AFAPF
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLNPEITTEDVRVAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M+GQWLG R IRTNW+TRKPPA
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q++ +K + FD+V NQSSP NCTVYCGG L+E L+ + FSPFG I+++RVF
Sbjct: 179 --PKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ--P 297
EKGY+F++F++ ++A HAI S++ T I GH VKCFWGKES P +PQ
Sbjct: 237 PEKGYSFIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKES--------PDMAKSPQQVD 288
Query: 298 NSTAPQFPYIYNQ----QMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQV 353
S Q+ +Y Q Q Y Q+P + YGQ QG+ G+ Q
Sbjct: 289 YSQWGQWNQVYGNPQQQQQQQQQQQYGQYVTNGWQMP-SYNMYGQTWNQQGF-GVEQSQS 346
Query: 354 PGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
W G G+ P+AQ A S +A + M + TQ
Sbjct: 347 TAWMGGFGS-PSAQAAAPPGTVMSSLANFGMAGYQTQ 382
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 204/413 (49%), Positives = 250/413 (60%), Gaps = 51/413 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHIFVGDLSP 105
A ALAAMN R L KE+KVNWA++P +Q K+DTS +H+H+FVGDLSP
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSSKYIVAITVHLRDQDHFHVFVGDLSP 119
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
EI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R
Sbjct: 120 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 179
Query: 166 SIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
IRTNW+TRKPPA + Q + TK + F++V NQSSP NCTVYCGG L ++L+ +
Sbjct: 180 QIRTNWATRKPPA---PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 236
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES----- 291
Query: 286 LAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQL 339
P+ T F + Q G W Q Y A Q+P + YGQ
Sbjct: 292 -----------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQA 338
Query: 340 GYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
QG+ G+ W G GAQP A QA P + A Y M + TQ
Sbjct: 339 WNQQGF-GVDQSPSAAWMGGFGAQP-----AQGQAAPVIPNQAGYGMASYQTQ 385
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 172/281 (61%), Positives = 210/281 (74%), Gaps = 5/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K + ENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 247/416 (59%), Gaps = 51/416 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 120
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 121 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 180
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 181 GGRQIRTNWATRKPPA---PKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 237
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES-- 295
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQY 336
P+ T F + Q G W Q Y A Q+P Y
Sbjct: 296 --------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP----PY 336
Query: 337 GQLGYPQGYVGMVGRQVP--GWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G G P G Q P W G GAQP Q P A Y M FPTQ
Sbjct: 337 GVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ 392
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 186/348 (53%), Positives = 233/348 (66%), Gaps = 21/348 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN-STLAQPSAPTTPQPNST 300
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + + + Q S PQP
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQSQIGYPQPYG- 296
Query: 301 APQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q G WY Q Y Q+P + YGQ QG+
Sbjct: 297 ----------QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 333
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + P Q
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------PVQQQNQIGY 291
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 292 PQ-PY---GQWGQWYGNAQQIGQYVPNGWQVP-AYGMYGQAWNQQGF 333
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 230/359 (64%), Gaps = 29/359 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
+E P TLYVGNL VTE L+ +FSQ+GP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----------NHYHIFVGDLSPEIETQT 111
+LAAMN R + KE+KVNWA++P +Q K S +H+H+FVGDLSPEI T
Sbjct: 62 SLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +T++EV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I+++RVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ P
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET--------PDM 290
Query: 292 PTTPQPNSTAPQ--FPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q S A Q FP Y Q G WY Q Y Q+P + YGQ QGY
Sbjct: 291 LNPVQQVSEASQISFPPPYG-QWGQWYGGAQQIGQYVPNGWQMP-AYGVYGQAWNQQGY 347
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 246/394 (62%), Gaps = 26/394 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG 290
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQ-VPGWQ 357
+P Y Q G WY Q Y Q+P YG G P G Q P W
Sbjct: 291 --YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP----AYGMYGQPWNQQGFNQTQSSPPWM 343
Query: 358 GIP-GAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G G QP Q P+ A Y + + TQ
Sbjct: 344 GPNYGVQPPPGQN--GSMMPNQPAGYRVAGYETQ 375
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG 290
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 291 --YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 333
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + P Q
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------PVQQQNQIGY 291
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 292 PQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 333
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 229/359 (63%), Gaps = 32/359 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
+E P TLYVGNL VTE L+ +FSQ+GP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----------NHYHIFVGDLSPEIETQT 111
+LAAMN R + KE+KVNWA++P +Q K S +H+H+FVGDLSPEI T
Sbjct: 62 SLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +T++EV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I+++RVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET----------- 287
Query: 292 PTTPQPNSTAPQ--FPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P P A Q FP Y Q G WY Q Y Q+P + YGQ QGY
Sbjct: 288 PDMLNPVQQASQISFPPPYG-QWGQWYGGAQQIGQYVPNGWQMP-AYGVYGQAWNQQGY 344
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + P Q
Sbjct: 238 KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------PVQQQNQIGY 291
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 292 PQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 333
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/405 (48%), Positives = 251/405 (61%), Gaps = 25/405 (6%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M +ES TLYVGNL VTE L+ LFSQIGP K CK+I + +DPY F+EFV H A
Sbjct: 1 MDEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+A A MNKR L KE+KVNWA+SP Q K+DTSNH+H+FVGDLSP+I T+ ++ AFAPF
Sbjct: 61 ASARATMNKRKILGKEVKVNWATSPSCQ-KKDTSNHFHVFVGDLSPDITTEDIRAAFAPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+++D T KSKGY FVSF K +AENAI+ M GQWL R IRTNW+TRKPPA
Sbjct: 120 GHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q++ +K + FD++ QSSP NCTVYCGG L E L+ + FSPFG I++IRVF
Sbjct: 179 --PKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F++ ++A HAI S++ T I G+ VKCFWGKES + + + S +
Sbjct: 237 PDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPD---MQKNSQQVSVTDKG 293
Query: 300 TAPQFPYIYNQQMG--YWYPQA------------AAYTATAAQLPQQFYQYGQLGYPQGY 345
T + Y Y Q Y PQ Y Q+P + YGQ QG+
Sbjct: 294 TKERVEYNYWGQWNQPYGNPQQQQQQQQQQQQQYGQYMTNGWQVP-SYNMYGQTWNQQGF 352
Query: 346 VGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
GM Q GW G G+Q +AQ A S + Y M + TQ
Sbjct: 353 -GMEQSQSSGWMGGFGSQ-SAQAAAPQGPVMSNLGNYNMAGYQTQ 395
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/403 (48%), Positives = 248/403 (61%), Gaps = 32/403 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M +ES TLYVGNL VTE L+ LFSQIGP K CK+I + +DPY F+EFV H A
Sbjct: 3 MDEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDA 62
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+A A MNKR L KE+KVNWA+SP Q K+DTSNH+H+FVGDLSP+I T+ ++ AFAPF
Sbjct: 63 ASARATMNKRKILGKEVKVNWATSPSCQ-KKDTSNHFHVFVGDLSPDITTEDIRAAFAPF 121
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+++D T KSKGY FVSF K +AENAI+ M GQWL R IRTNW+TRKPPA
Sbjct: 122 GHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPA- 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q++ +K + FD++ QSSP NCTVYCGG L E L+ + FSPFG I++IRVF
Sbjct: 181 --PKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 238
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F++ ++A HAI S++ T I G+ VKCFWGKES + Q NS
Sbjct: 239 PDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPD------------MQKNS 286
Query: 300 TAPQFPYIYNQQMGYWYPQA------------AAYTATAAQLPQQFYQYGQLGYPQGYVG 347
++ Y Y PQ Y Q+P + YGQ QG+ G
Sbjct: 287 QQVEYNYWGQWNQPYGNPQQQQQQQQQQQQQYGQYMTNGWQVP-SYNMYGQTWNQQGF-G 344
Query: 348 MVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
M Q GW G G+Q +AQ A S + Y M + TQ
Sbjct: 345 MEQSQSSGWMGGFGSQ-SAQAAAPQGPVMSNLGNYNMAGYQTQ 386
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/389 (50%), Positives = 243/389 (62%), Gaps = 37/389 (9%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN R
Sbjct: 93 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 152
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+
Sbjct: 153 KILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 211
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q ++
Sbjct: 212 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQENN 268
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F
Sbjct: 269 TKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRF 328
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYN 309
+T E+A HAI S++ T I GH VKC+WGKES P+ T F +
Sbjct: 329 STHESAAHAIVSVNGTTIEGHVVKCYWGKES----------------PDMTK-NFQQVDY 371
Query: 310 QQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQGIPGAQ 363
Q G W Q Y A Q+P + YGQ QG+ G+ W G GAQ
Sbjct: 372 SQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQAWNQQGF-GVDQSPSAAWMGGFGAQ 429
Query: 364 PTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
P A Q P + A Y M + TQ
Sbjct: 430 P-----AQGQGAPVIPNQAGYGMASYQTQ 453
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 228/349 (65%), Gaps = 30/349 (8%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA+ALAAMN R
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGR 109
Query: 70 VFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQTLKEAFAP 118
+ KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+ +K AFAP
Sbjct: 110 KIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAAFAP 168
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 169 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 228
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ S+TK +++D+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRV
Sbjct: 229 ---PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRV 285
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPN 298
F +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ P + Q N
Sbjct: 286 FPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET--------PDMVSPVQQN 337
Query: 299 STAPQFPYIYNQQMGYWY--PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 338 QIG--YPQAYG-QWGQWYGNAQLGQYVPNGWQVP-AYGMYGQAWNQQGF 382
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 245 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 301
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 302 AAHAIVSVNGTTIEGHVVKCYWG 324
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 230/359 (64%), Gaps = 33/359 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
+E P TLYVGNL VTE L+ +FSQ+GP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EEDLPKTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----------NHYHIFVGDLSPEIETQT 111
+LAA+N R L KE+KVNWA++P +Q K S +H+H+FVGDLSPEI T
Sbjct: 62 SLAAINGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDD 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+ K +T++EV NQSSP+NCTVYCGG L+E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I+++RVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET----------- 287
Query: 292 PTTPQPNSTAPQ--FPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P P A Q FP Y Q G WY Q Y Q+P + YGQ Y QGY
Sbjct: 288 PDMLNPVQQASQISFPPPYG-QWGQWYGGAQQIGQYVPNGWQVP-AYGVYGQ-AYQQGY 343
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 231/350 (66%), Gaps = 10/350 (2%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ +F+QIGP K CK+I + GNDPY F+EF H AA +LAAMN R
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGR 74
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T +K AF PFG IS+ R+V+
Sbjct: 75 KIMGKEVKVNWATTPTSQ-KKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVK 133
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + S+
Sbjct: 134 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PKTTYESN 190
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
+K + FD+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +KGY+FV+F
Sbjct: 191 SKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSFVRF 250
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESEN-NSTLAQPSAPTTPQPNSTAPQFPYIY 308
+ E+A HAI S++ + I GH VKC+WGKE+ + +T+ Q P P + P
Sbjct: 251 NSHESAAHAIVSVNGSSIEGHVVKCYWGKETPDMMNTMQQMPMPQVGMPQACLPSSLTAT 310
Query: 309 NQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVP-GWQ 357
+ + P AA A +LP YGQ G G + + VP GWQ
Sbjct: 311 ERILA--DPCAARLAAEQDELPSS-PAYGQWGQWYGNGHQISQYVPNGWQ 357
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS GP+ +V + G Y+F+ F H
Sbjct: 199 VVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKG---YSFVRFNSHES 255
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 256 AAHAIVSVNGSSIEGHVVKCYWG 278
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 231/359 (64%), Gaps = 30/359 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
+E P TLYVGNL VTE L+ +FSQ+GP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EEDLPKTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----------NHYHIFVGDLSPEIETQT 111
+LAA+N R L KE+KVNWA++P +Q K S +H+H+FVGDLSPEI T
Sbjct: 62 SLAAINGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDD 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+ K +T++EV NQSSP+NCTVYCGG L+E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I+++RVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ P
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET--------PDM 290
Query: 292 PTTPQPNSTAPQ--FPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q S A Q FP Y Q G WY Q Y Q+P + YGQ Y QGY
Sbjct: 291 LNPVQQVSEASQISFPPPYG-QWGQWYGGAQQIGQYVPNGWQVP-AYGVYGQ-AYQQGY 346
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/281 (60%), Positives = 207/281 (73%), Gaps = 4/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K NH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPF 121
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 122 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 181 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 238
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 279
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/281 (60%), Positives = 207/281 (73%), Gaps = 4/281 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K NH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPF 121
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 122 GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA- 180
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF
Sbjct: 181 --PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 238
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 279
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
D+ QP TLYVGNL VTE L+ LF QIGP K CK+I + G+DPY F+EF H A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+AAMN R L KE+KVNWA++P +Q K+DTS+H+H+FVGDLSPEI T +K AF PFG+
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQ-KKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGK 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+CR+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKP T
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
++FDEV NQSSP+NCTVYCGG L E+++ + FSPFG I++IRVF +
Sbjct: 181 NETTNTKQ---LSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F + E A HAI S++ T I G+ VKC+WGKE+ + + Q S A
Sbjct: 238 KGYSFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVSPMQQVQMPQQNTMSFA 297
Query: 302 PQFPYIYNQQMGYWYP---QAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQG 358
Q + Q G WY Q Y Q+P + YGQ QGY + GW G
Sbjct: 298 AQ----HYSQWGQWYGNTQQIGQYVPNGWQVP-SYGVYGQTWDQQGYNQL--HAGAGWTG 350
Query: 359 I 359
+
Sbjct: 351 M 351
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/284 (59%), Positives = 206/284 (72%), Gaps = 9/284 (3%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DES+P TLYVGNL VTE+L+ LF IGP K CK+I E GNDPY F+EF H A
Sbjct: 107 MEDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDPYCFVEFYDHNHA 166
Query: 60 ATALAAMNKRVFLEKEMKVNWASSP-GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
+ AL AMN R + KE+KVNWA++P GN K+DTSNH+H+FVGDLSPEI+T LK AFAP
Sbjct: 167 SAALTAMNGRKIMHKEVKVNWATTPSGN--KKDTSNHHHVFVGDLSPEIDTTDLKAAFAP 224
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG+IS+ R+VRD QT KS+GY FVSFV K +AENAI AM+GQWLG R+IRTNW+TRKPP
Sbjct: 225 FGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPP 284
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ N K +++DEV Q+SPTN TVYCGG K L E+L+ FS FG I +IRV
Sbjct: 285 -----PKSNEGQKQLSYDEVLCQASPTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRV 339
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
F EKGY+F++F + E A AI +++ T I G VKC WGKES +
Sbjct: 340 FPEKGYSFIRFFSHEVAAMAIVTVNGTQIEGQAVKCSWGKESSD 383
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 211/298 (70%), Gaps = 22/298 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 120
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 121 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 180
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 181 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 237
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 295
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 211/298 (70%), Gaps = 22/298 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 120
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 121 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 180
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 181 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 237
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 238 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 295
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 232/349 (66%), Gaps = 21/349 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
++ P TLYVGNL VTE L+ LFSQIGP K CK+I R GNDPY F+EF H A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQ 290
Query: 300 TAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 291 IG--YPPTYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 335
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/361 (49%), Positives = 231/361 (63%), Gaps = 33/361 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
+E P TLYVGNL VTE L+ +FSQ+GP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EEELPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----------NHYHIFVGDLSPEIETQT 111
+LAA+N R + KE+KVNWA++P +Q K S +H+H+FVGDLSPEI T
Sbjct: 62 SLAAINGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+ K +T++EV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN----STLA 287
I+++RVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + ++
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQQVS 298
Query: 288 QPSAPTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQG 344
+PS + P P Q G WY Q + Y Q+P + YGQ QG
Sbjct: 299 EPSQISFPPPYG-----------QWGQWYGGAQQISQYVPNGWQMP-AYGVYGQAWNQQG 346
Query: 345 Y 345
Y
Sbjct: 347 Y 347
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 232/349 (66%), Gaps = 21/349 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
++ P TLYVGNL VTE L+ LFSQIGP K CK+I R GNDPY F+EF H A
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 69
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 70 AAALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPF 128
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 129 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA- 187
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF
Sbjct: 188 --PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 245
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 246 PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQ 298
Query: 300 TAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 299 IG--YPPTYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 343
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/372 (51%), Positives = 233/372 (62%), Gaps = 46/372 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M DES P TLYVGNL VTE L+ LF+QIGP K CK+I E
Sbjct: 1 MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA N Q++ +K + F++V NQSSP NCTVYCGG L+E L
Sbjct: 180 GGRQIRTNWATRKPPAPKN---VQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + FSPFG I++IRVF EKGY+F++F++ E+A HAI S++ T I H VKC+WGKES
Sbjct: 237 MRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKES-- 294
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQ-----QMGYWYPQA----AAYTATAAQLPQQF 333
P + PQ Y Q QM Y PQA Y A Q+P
Sbjct: 295 ------------PDIAKSVPQMEYGQGQWGQWSQM-YGSPQAQQYGQQYMANGWQVPSYG 341
Query: 334 YQYGQLGYPQGY 345
YGQ QG+
Sbjct: 342 VSYGQSWNQQGF 353
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG 290
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 291 --YPPTYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 333
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 244/406 (60%), Gaps = 54/406 (13%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPYAFLE 52
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+E
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
F H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDI 133
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+
Sbjct: 134 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 193
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG
Sbjct: 194 TRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 250
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 251 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES------------ 298
Query: 293 TTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYV 346
P+ T F + Q G W Q Y A Q+P + YGQ QG+
Sbjct: 299 ----PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQAWNQQGF- 351
Query: 347 GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
G+ W G GAQP A QA P + A Y M + TQ
Sbjct: 352 GVDQSPSAAWMGGFGAQP-----AQGQAAPVIPNQAGYGMASYQTQ 392
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 232/347 (66%), Gaps = 19/347 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+F++F++ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 KGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG 290
Query: 302 PQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 291 --YPPAYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGMYGQPWSQQGF 333
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 245/416 (58%), Gaps = 54/416 (12%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 1 MEDDGQPKTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 180 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + FSPFG IV+ R F KGY+FV+F+T E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 237 MRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKETPD 296
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQY 336
T F + Q G W Q Y Q+P + Y
Sbjct: 297 -----------------TTKDFQQVEYSQWGQWSQVYGNPQQYGQYVTNGWQVP-SYGMY 338
Query: 337 GQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
GQ QG+ G+ + W AQP A QA P + A Y M + TQ
Sbjct: 339 GQAWNQQGF-GIDQTPLATWMSGFVAQP-----AQGQAAPVIPNQAGYGMASYQTQ 388
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 250/406 (61%), Gaps = 40/406 (9%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DES P TLYVGNL VTE L+ LF+QIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MDDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDL+P+I T+ ++ AF PF
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLNPDISTEDVRAAFTPF 119
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 120 GKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPA- 178
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ Q+S +K + F+EV QSSP NCTVYCGG +L+E L+ + FSPFG I++IRVF
Sbjct: 179 --PKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVF 236
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
EKGY+F++F++ ++A HAI S++ T I GH VKC+WGKES + PQ
Sbjct: 237 PEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTD--------MAKNPQ--- 285
Query: 300 TAPQFPYIYNQQMGYW---------------YPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
QF Y Q G W Q Y + Q+P + YGQ QG
Sbjct: 286 ---QFEY---SQWGQWNQVYGNPQQQQQQQQQQQYGQYVSDGWQVP-SYNMYGQTWSQQG 338
Query: 345 YVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
+ G Q W G G+ +AQ A A M ++M + +Q
Sbjct: 339 F-GTEQSQSSAWMGSFGSS-SAQGAAPPGAGLPNMGNFSMAGYQSQ 382
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 230/357 (64%), Gaps = 29/357 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q +
Sbjct: 239 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQ 298
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
PQP Q G WY Q YT Q+P + YGQ QG+
Sbjct: 299 IGYPQPYG-----------QWGQWYGNAQQIGQYTPNGWQVP-AYGMYGQAWNQQGF 343
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/274 (61%), Positives = 206/274 (75%), Gaps = 5/274 (1%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNK 68
LYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN
Sbjct: 140 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 199
Query: 69 RVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV 128
R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V
Sbjct: 200 RKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 258
Query: 129 RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNS 188
+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q +
Sbjct: 259 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQEN 315
Query: 189 HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVK 248
+TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+
Sbjct: 316 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 375
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
F+T E+A HAI S++ T I GH VKC+WGKES +
Sbjct: 376 FSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 409
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 25/328 (7%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRV 70
YVGNLD SVTE+L+ LF Q+G V+ CK+ REP DPY F+EF H A A+ MN ++
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 71 FLEKEMKVNWASSPGNQ---PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
++M+V+WA+ GN+ K DTS H+H++VGDLSPEI+ Q L+EAF FGEIS+C++
Sbjct: 61 LQNRKMRVDWATGQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKV 120
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
V+DPQ+ KS+GY FV FVKK +AE +I+AMNGQWLG + I+T W+TRKP NE K +
Sbjct: 121 VKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQ 180
Query: 188 SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFV 247
K + +DEV+NQ++PTN TV+CGG +D+ EE++ K F P G I I++FKEKGYAF+
Sbjct: 181 ---KKLNYDEVFNQTTPTNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKGYAFI 237
Query: 248 KFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL--------AQPSAPTTPQPNS 299
K+T+KE+A AI +HN+++NG ++C WGK++ + T AQPS P+ P
Sbjct: 238 KYTSKESACQAIVELHNSNLNGQMIRCSWGKDTGVDQTSNPAQEANGAQPSMPSYPNGGG 297
Query: 300 TAPQFPYIYNQ--QMGYW--YPQAAAYT 323
FP NQ QMG W YPQ YT
Sbjct: 298 ----FP---NQMGQMGCWQYYPQQMPYT 318
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ +YVG+L + E+ L F G + CKV+++P + Y F+ FV A
Sbjct: 84 DTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDA 143
Query: 60 ATALAAMNKRVFLEKEMKVNWAS-SPGNQP----------------KQDTSNHYHIFVGD 102
T+++AMN + K +K WA+ P N P Q T + +F G
Sbjct: 144 ETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGG 203
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L +I + L ++F P G+I +I K KGYAF+ + K A AI ++ L
Sbjct: 204 LKQDITEEMLHKSFQPHGQIEKIKI------FKEKGYAFIKYTSKESACQAIVELHNSNL 257
Query: 163 GSRSIRTNW 171
+ IR +W
Sbjct: 258 NGQMIRCSW 266
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 243/406 (59%), Gaps = 54/406 (13%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPYAFLE 52
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
F H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDI 119
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+
Sbjct: 120 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG
Sbjct: 180 TRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES------------ 284
Query: 293 TTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYV 346
P+ T F + Q G W Q Y A Q+P + YGQ QG+
Sbjct: 285 ----PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQAWNQQGF- 337
Query: 347 GMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
G+ W G GAQP A Q P + A Y M + TQ
Sbjct: 338 GVDQSPSAAWMGGFGAQP-----AQGQGAPVIPNQAGYGMASYQTQ 378
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 226/359 (62%), Gaps = 40/359 (11%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPN 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 TNNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG G L E+L
Sbjct: 180 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ + F FG I++IRVF EKGY+F++F+T ++A HAI S++ T I GH VKC+WGKE
Sbjct: 237 MRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE--- 293
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQ 338
TP Q Y Q G Y Q Y A Q+P + YGQ
Sbjct: 294 -----------TPDMTKNFQQVDYSQWGQWGQMYGSPQQYGQYVANGWQVP-SYGMYGQ 340
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/288 (58%), Positives = 212/288 (73%), Gaps = 13/288 (4%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
C E P TLYVGNLDV+VTE+L+ ALF Q+G VKGCK+IRE +DPY F+EF H AA
Sbjct: 5 CLEDGPRTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGASDPYCFVEFAHPASAAA 64
Query: 62 ALAAMNKRVFLEKEMKVNWASSPG---------NQPKQDTSNHYHIFVGDLSPEIETQTL 112
AL AMNKR+ L KEMKVNWASSPG N PK DTS H+HIFVGDLSP+I T+TL
Sbjct: 65 ALTAMNKRICLGKEMKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDITTETL 124
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K F PFGEIS+ ++V+D T KSKGY FVSFV+K +A+ AI MNGQWLGSR+IRTNW+
Sbjct: 125 KNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWA 184
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
RKPPA + S+ + F++VY Q+SP N TVYCGG + +E ++ + FSPFG
Sbjct: 185 ARKPPA---PYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGL-INSDENIIRQTFSPFGR 240
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
I++IR F++KGYAFV+F KE+A +AI ++H +++ G +VKC WGKES
Sbjct: 241 ILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKES 288
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 208/291 (71%), Gaps = 14/291 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQ----------PKQDTSNHYHIFVGDLSPEIET 109
A ALAAMN R L KE+KVNWA++P +Q P S+H+H+FVGDLSPEI T
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITT 121
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRT
Sbjct: 122 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 181
Query: 170 NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
NW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSP
Sbjct: 182 NWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 238
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
FG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 289
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 16/292 (5%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 60
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSN-----------HYHIFVGDLSPEIE 108
A ALAAMN R L KE+KVNWA++P +Q K+DTS+ H+H+FVGDLSPEI
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSSKYFCCILRKSYHFHVFVGDLSPEIT 119
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IR
Sbjct: 120 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 179
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
TNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FS
Sbjct: 180 TNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 236
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
PFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 288
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 208/291 (71%), Gaps = 14/291 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQ----------PKQDTSNHYHIFVGDLSPEIET 109
A ALAAMN R L KE+KVNWA++P +Q P S+H+H+FVGDLSPEI T
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITT 121
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRT
Sbjct: 122 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 181
Query: 170 NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
NW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSP
Sbjct: 182 NWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 238
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
FG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 289
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 227/339 (66%), Gaps = 19/339 (5%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 80
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+
Sbjct: 81 KIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 139
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + S+
Sbjct: 140 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PKSTYESN 196
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +KGY+FV+F
Sbjct: 197 TKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRF 256
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYN 309
+ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N +P Y
Sbjct: 257 NSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG--YPQAYG 307
Query: 310 QQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q G WY Q Y Q+P + YGQ QG+
Sbjct: 308 -QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 205 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 261
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 262 AAHAIVSVNGTTIEGHVVKCYWG 284
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 211/283 (74%), Gaps = 7/283 (2%)
Query: 1 MCDESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHT 57
+ +E++P + YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H
Sbjct: 75 LGEETRPGASPRYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHR 134
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFA
Sbjct: 135 DAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFA 193
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
PFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPP
Sbjct: 194 PFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPP 253
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
A + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IR
Sbjct: 254 A---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR 310
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
VF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 311 VFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 353
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 207/298 (69%), Gaps = 21/298 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K NH+H+FVGD
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGD 121
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 122 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 181
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L
Sbjct: 182 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQL 238
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 MRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 296
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 204/271 (75%), Gaps = 5/271 (1%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN R
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 62
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+
Sbjct: 63 KILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 121
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q ++
Sbjct: 122 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQENN 178
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F
Sbjct: 179 TKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRF 238
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKES 280
+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 239 STHESAAHAIVSVNGTTIEGHVVKCYWGKES 269
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 233/359 (64%), Gaps = 32/359 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN-STLAQP 289
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + + + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQ 297
Query: 290 SAPTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
S PQP Q G WY Q Y Q+P + YGQ QG+
Sbjct: 298 SQIGYPQPYG-----------QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 204/271 (75%), Gaps = 5/271 (1%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN R
Sbjct: 114 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 173
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+
Sbjct: 174 KILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 232
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q ++
Sbjct: 233 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQENN 289
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F
Sbjct: 290 TKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRF 349
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKES 280
+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 350 STHESAAHAIVSVNGTTIEGHVVKCYWGKES 380
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 195/427 (45%), Positives = 248/427 (58%), Gaps = 56/427 (13%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN--------------- 45
M +ES TLYVGNL VTE L+ LFSQIGP K CK+I + N
Sbjct: 1 MDEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYV 60
Query: 46 ----------DPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
DPY F+EFV H AA+A A MNKR L KE+KVNWA+SP Q K+DTSNH
Sbjct: 61 WLCCLQHTSSDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQ-KKDTSNH 119
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+H+FVGDLSP+I T+ ++ AFAPFG IS+ R+++D T KSKGY FVSF K +AENAI+
Sbjct: 120 FHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAIS 179
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWL R IRTNW+TRKPPA + Q++ +K + FD++ QSSP NCTVYCGG
Sbjct: 180 KMAGQWLQGRQIRTNWATRKPPA---PKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQ 236
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L E L+ + FSPFG I++IRVF +KGY+FV+F++ ++A HAI S++ T I G+ VKCF
Sbjct: 237 SGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCF 296
Query: 276 WGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQA------------AAYT 323
WGKES + Q NS ++ Y Y PQ Y
Sbjct: 297 WGKESPD------------MQKNSQQVEYNYWGQWNQPYGNPQQQQQQQQQQQQQYGQYM 344
Query: 324 ATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSMMAAYA 383
Q+P + YGQ QG+ GM Q GW G G+Q +AQ A S + Y
Sbjct: 345 TNGWQVP-SYNMYGQTWNQQGF-GMEQSQSSGWMGGFGSQ-SAQAAAPQGPVMSNLGNYN 401
Query: 384 MQQFPTQ 390
M + TQ
Sbjct: 402 MAGYQTQ 408
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/358 (51%), Positives = 232/358 (64%), Gaps = 30/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN----- 292
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 -PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYVPNGWQVP-AYGMYGQAWNQQGF 344
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 230/357 (64%), Gaps = 28/357 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 239 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ--- 295
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 296 ----QQNQIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 230/359 (64%), Gaps = 30/359 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
++ P TLYVGNL VTE L+ LFSQIGP K CK+I R GNDPY F+EF H A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIET 109
A ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITT 121
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ +K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRT
Sbjct: 122 EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT 181
Query: 170 NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
NW+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSP
Sbjct: 182 NWATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSP 238
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
FG I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 239 FGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN---- 294
Query: 290 SAPTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 295 --PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 346
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 246/405 (60%), Gaps = 37/405 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGYVG 347
Q N +P Y Q G WY Q Y Q+P YG G P G
Sbjct: 296 -----QQNQIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP----AYGMYGQPWNQQG 343
Query: 348 MVGRQ-VPGWQGIP-GAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
Q P W G G QP Q P+ A Y + + TQ
Sbjct: 344 FNQTQSSPPWMGPNYGVQPPPGQN--GSMMPNQPAGYRVAGYETQ 386
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/358 (51%), Positives = 232/358 (64%), Gaps = 30/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN----- 292
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 -PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 208/298 (69%), Gaps = 22/298 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK I E
Sbjct: 1 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPN 60
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 61 ANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 119
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 120 LSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + FD+V NQS+ NCTVYCGG G L E+L
Sbjct: 180 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFDDVVNQSTAKNCTVYCGGIGSGLTEQL 236
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I++IRVF EKGY+F++F+T ++A HAI S++ T I GH VKC+WGKE+
Sbjct: 237 MRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKET 294
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/357 (51%), Positives = 230/357 (64%), Gaps = 28/357 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 239 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------ 292
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 210/298 (70%), Gaps = 22/298 (7%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------ 42
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E
Sbjct: 39 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPN 98
Query: 43 PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGD
Sbjct: 99 ANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGD 157
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWL
Sbjct: 158 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 217
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
G R IRTNW+TRKPPA + Q ++TK + F++V NQSS NCTVYCGG G L+E+L
Sbjct: 218 GGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSEQL 274
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I++IRVF EKGY+F++F+T ++A HAI S++ T I GH VKC+WGKE+
Sbjct: 275 MRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKET 332
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 83 SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG---- 138
SP +D ++VG+LS ++ + + F+ G +C+++ + + G
Sbjct: 33 SPTGCDMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVS 92
Query: 139 -----------YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
Y FV F + +A A+ AMNG+ + + ++ NW+T ++++K +
Sbjct: 93 FPVMPNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT----TPSSQKKDTS 148
Query: 188 SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------ 241
+H V+ G ++ E + F+PFG I D RV K+
Sbjct: 149 NHFH-----------------VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKS 191
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY FV F K A +AI + + G ++ W +P AP + Q N+T
Sbjct: 192 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR--------KPPAPKSTQENNTK 243
Query: 302 P-QFPYIYNQ 310
+F + NQ
Sbjct: 244 QLRFEDVVNQ 253
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 232/358 (64%), Gaps = 30/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 296 -----QQNQIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQPWNQQGF 344
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 226/338 (66%), Gaps = 21/338 (6%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+
Sbjct: 61 KIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 119
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + ++
Sbjct: 120 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PKSTYEAN 176
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +KGY+FV+F
Sbjct: 177 TKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRF 236
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYN 309
+ E+A HAI S++ T I GH VKC+WGKE+ + + Q +P Y
Sbjct: 237 NSHESAAHAIVSVNGTTIEGHIVKCYWGKETPDMVSPVQQLG------------YPPAYG 284
Query: 310 QQMGYWY--PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q G WY Q + Q+P + YGQ QG+
Sbjct: 285 -QWGQWYGSAQLGQFVPNGWQVP-AYGLYGQPWNQQGF 320
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 185 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 241
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 242 AAHAIVSVNGTTIEGHIVKCYWG 264
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 244/405 (60%), Gaps = 35/405 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV +QSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGYVG 347
Q N PY Q G WY Q Y Q+P YG G P G
Sbjct: 296 -----QQNQIGYPQPY---GQWGQWYGNAQQIGQYMPNGWQVP----AYGMYGQPWNQQG 343
Query: 348 MVGRQVPG-WQGIP-GAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
Q W G G QP Q P+ A Y + + TQ
Sbjct: 344 FNQTQSSAPWMGPNYGVQPPPPQGQNGSMLPNQPAGYRVAGYETQ 388
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 230/357 (64%), Gaps = 28/357 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV +QSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 239 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------ 292
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 221/342 (64%), Gaps = 44/342 (12%)
Query: 69 RVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV 128
+ FL +EMK NW++SP K DT+ H+HIFVGDLS ++ETQ L+EAF PFGEIS+CR+V
Sbjct: 21 KTFLSREMKGNWSNSPAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVV 80
Query: 129 RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNS 188
RDPQT KSKGY FVSF++K +AE AI AMNGQWLG R IRTNW+TR+P + N ++ +
Sbjct: 81 RDPQTQKSKGYGFVSFLRKQDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQ 140
Query: 189 HTKT-----ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
T +TFDEVYNQ+SPTNCTVYCGG G+ L+EEL+ K FS +G I +IRVFK+KG
Sbjct: 141 GNSTPKYTPLTFDEVYNQASPTNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDKG 200
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST--A 301
YAFV+F TKE+ATHAI ++HNTD+NG VKC WGKES S P Q T A
Sbjct: 201 YAFVRFATKESATHAIVAVHNTDVNGQIVKCSWGKES---------SDPNNQQVQHTIAA 251
Query: 302 PQFPYIYNQQMGYWYPQAAAYTATAAQLPQQF-----------YQYGQLGYPQGYVGMVG 350
Q PY QQM YWYPQ A P QF YQYGQ + G+ GM G
Sbjct: 252 AQIPYHQYQQMNYWYPQNYA-------QPSQFVQGTTPAAAVQYQYGQY-FGNGF-GM-G 301
Query: 351 RQVPGWQGIPGAQPTAQQMAVAQAQPSMM---AAYAMQQFPT 389
QV W P Q ++Q + Q ++ A Y MQQ+ T
Sbjct: 302 LQV-AW---PAGQASSQSAPLGQQATGLLPAAATYPMQQYQT 339
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D ++ ++VG+L V + L F+ G + C+V+R+P + Y F+ F+ A
Sbjct: 43 DTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDA 102
Query: 60 ATALAAMNKRVFLEKEMKVNWAS-------------SPGNQ-PK-----------QDTSN 94
TA+ AMN + + ++ NWA+ S GN PK Q +
Sbjct: 103 ETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPT 162
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
+ ++ G L + + +++ F+ +G I R+ +D KGYAFV F K A +AI
Sbjct: 163 NCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFATKESATHAI 216
Query: 155 TAMNGQWLGSRSIRTNW 171
A++ + + ++ +W
Sbjct: 217 VAVHNTDVNGQIVKCSW 233
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/358 (51%), Positives = 231/358 (64%), Gaps = 31/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+ K +++D+V NQSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q N PY Q G WY Q Y Q+P + YGQ + QG+
Sbjct: 296 -----QQNQVGYPPPY---GQWGQWYGSAQQIGQYMPNGWQVP-AYGMYGQ-AWNQGF 343
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/357 (51%), Positives = 229/357 (64%), Gaps = 28/357 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I E GNDPY F+EF AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYCFVEFHDDRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 182 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 239 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------ 292
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 344
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/358 (51%), Positives = 232/358 (64%), Gaps = 30/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 296 -----QQNQIG--YPPTYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 344
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 205/292 (70%), Gaps = 22/292 (7%)
Query: 7 PTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPY 48
P YVGNL VTE L+ LFSQIGP K CK+I E NDPY
Sbjct: 44 PKEEYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPY 103
Query: 49 AFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI
Sbjct: 104 CFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEIT 162
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IR
Sbjct: 163 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 222
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
TNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FS
Sbjct: 223 TNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 279
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
PFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 280 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTAIEGHVVKCYWGKES 331
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/358 (51%), Positives = 232/358 (64%), Gaps = 30/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+F++F++ E+A HAI S++ T I GH VKC+WGKE+ + Q
Sbjct: 238 GQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-- 295
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 296 -----QQNQIG--YPPAYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGMYGQPWSQQGF 344
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 231/358 (64%), Gaps = 29/358 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQ 110
ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTN
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
W+TRKPPA + +TK +++DEV +QSSP+NCTVYCGG L E+L+ + FSPF
Sbjct: 181 WATRKPPA---PKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I++IRVF +KGY+F++F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 238 GQILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN----- 292
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 293 -PVQQQQNQIG--YPPAYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGMYGQPWSQQGF 345
>gi|158287021|ref|XP_309081.4| AGAP005292-PA [Anopheles gambiae str. PEST]
gi|157019814|gb|EAA04819.5| AGAP005292-PA [Anopheles gambiae str. PEST]
Length = 394
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/321 (60%), Positives = 220/321 (68%), Gaps = 40/321 (12%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
HYHIFVGDLSPEIETQTLKEAFAPFG+IS+CR+VRDPQTLKSKGY FVSFVKK EAENAI
Sbjct: 79 HYHIFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAI 138
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYC--- 211
AMNGQWLGSRSIRTNW+TRKPPA NE + K +TFDEVYNQSSPTNCTVYC
Sbjct: 139 AAMNGQWLGSRSIRTNWATRKPPASKNE-----INAKPLTFDEVYNQSSPTNCTVYCGGI 193
Query: 212 -GGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
G LNE+++ K FSPFGTI +IRVFK+KGYAFV+F+TKE ATHAI ++HN++IN
Sbjct: 194 GGTLAGGLNEDILQKTFSPFGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVHNSEINSQ 253
Query: 271 TVKCFWGKES---ENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQM-GYW----YPQAAAY 322
TVKC WGKES N +LA + T P +TA Y QQ+ GYW A
Sbjct: 254 TVKCSWGKESGDPNNAPSLASQALSQTGFPFNTA------YGQQVAGYWYPPAPAYPATP 307
Query: 323 TATAAQLPQQF------YQYGQL-GYPQGYVGMVGRQVPG-WQGIPG-AQ-PTAQQMAVA 372
A L QF Y YGQ GY QGY+GM G Q+PG W +P AQ PTA Q A
Sbjct: 308 APAATPLQGQFLQGMQGYTYGQFAGYQQGYMGM-GMQIPGAWPAVPAQAQLPTAAQQITA 366
Query: 373 QA------QPSMMAAYAMQQF 387
Q+ Q + + AY MQQF
Sbjct: 367 QSVGGALPQTAGVVAYPMQQF 387
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ FV T A A+AAM
Sbjct: 82 IFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAIAAM 141
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIF---VGDLSP----------------EI 107
N + + ++ NWA+ K + + F SP +
Sbjct: 142 NGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVYNQSSPTNCTVYCGGIGGTLAGGL 201
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
L++ F+PFG I R+ +D KGYAFV F K A +AI A++ + S+++
Sbjct: 202 NEDILQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHNSEINSQTV 255
Query: 168 RTNW 171
+ +W
Sbjct: 256 KCSW 259
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/288 (57%), Positives = 204/288 (70%), Gaps = 22/288 (7%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPYAFLE 52
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
F H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDI 119
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+
Sbjct: 120 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG
Sbjct: 180 TRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 284
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/288 (57%), Positives = 204/288 (70%), Gaps = 22/288 (7%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPYAFLE 52
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
F H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDI 119
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+
Sbjct: 120 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG
Sbjct: 180 TRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 284
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 225/349 (64%), Gaps = 28/349 (8%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 70 VFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
+ KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 238 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQ 290
Query: 300 TAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 291 IG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 335
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 196 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 252
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 253 AAHAIVSVNGTTIEGHVVKCYWG 275
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/288 (57%), Positives = 204/288 (70%), Gaps = 22/288 (7%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE------------------PGNDPYAFLE 52
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
F H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDI 119
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+
Sbjct: 120 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG
Sbjct: 180 TRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 284
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 228/352 (64%), Gaps = 30/352 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMN 67
+YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN
Sbjct: 7 VMYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMN 66
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQTLKEAF 116
R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+ +K AF
Sbjct: 67 GRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAF 125
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
APFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKP
Sbjct: 126 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 185
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
PA + S+TK +++D+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++I
Sbjct: 186 PA---PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEI 242
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ 296
RVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q
Sbjct: 243 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQ-------Q 295
Query: 297 PNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
N +P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 296 QNQIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 343
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 204 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 260
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 261 AAHAIVSVNGTTIEGHVVKCYWG 283
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 225/349 (64%), Gaps = 28/349 (8%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 60
Query: 70 VFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
+ KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA- 179
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF
Sbjct: 180 --PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 237
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + P Q
Sbjct: 238 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------PVQQQNQI 291
Query: 300 TAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 292 GYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 335
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 196 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 252
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 253 AAHAIVSVNGTTIEGHVVKCYWG 275
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 219/307 (71%), Gaps = 25/307 (8%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
HYHIFVGDLSPEI+TQTL++AFAPFGEIS+ R+VRD QTLKSKGY FVSF+KK+EA++AI
Sbjct: 1 HYHIFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAI 60
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
AMNG+WLGSRSIRTNW+TRKP + + + +T ++FDEVY Q+S TNCTVYCGG
Sbjct: 61 AAMNGRWLGSRSIRTNWATRKPSII-----KADGNTLPLSFDEVYKQTSATNCTVYCGGI 115
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
L EELV K FSP+GTI +I+VFK+KGYAFV+F+TKE+A HAI ++HNT+ING TVKC
Sbjct: 116 TNGLTEELVQKHFSPYGTIQEIKVFKDKGYAFVRFSTKESAAHAIVAVHNTEINGQTVKC 175
Query: 275 FWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFY 334
WGKE+ + + + QP+ P + FPY Y QQMGYWYPQ +Y + Q+P Q+
Sbjct: 176 SWGKENSDMTAI-QPTGFDQPVAGTA---FPYAYGQQMGYWYPQ--SYPSATPQIPGQYI 229
Query: 335 Q----YGQLGY-PQGYVGMVG-------RQVPGWQGIPGA-QPTAQQMAVAQAQPS-MMA 380
Q GQ GY Q ++G + VPG +PGA Q Q A A QP+ ++A
Sbjct: 230 QSGFSLGQFGYHHQDFIGRLSMNLSSIWNNVPGHTQLPGAVQHIGQGTAAAIPQPNGVVA 289
Query: 381 AYAMQQF 387
AY +Q+F
Sbjct: 290 AYPVQRF 296
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 24/180 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + +V+R+ + Y F+ F+ + A +A+AAM
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 67 NKRVFLEKEMKVNWAS-------SPGNQP--------KQDTSNHYHIFVGDLSPEIETQT 111
N R + ++ NWA+ + GN KQ ++ + ++ G ++ + +
Sbjct: 64 NGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSATNCTVYCGGITNGLTEEL 123
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+++ F+P+G I ++ +D KGYAFV F K A +AI A++ + ++++ +W
Sbjct: 124 VQKHFSPYGTIQEIKVFKD------KGYAFVRFSTKESAAHAIVAVHNTEINGQTVKCSW 177
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+Y G + +TEEL+ FS G ++ KV ++ G YAF+ F AA A+ A++
Sbjct: 109 TVYCGGITNGLTEELVQKHFSPYGTIQEIKVFKDKG---YAFVRFSTKESAAHAIVAVHN 165
Query: 69 RVFLEKEMKVNWA 81
+ +K +W
Sbjct: 166 TEINGQTVKCSWG 178
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 227/350 (64%), Gaps = 30/350 (8%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 83
Query: 70 VFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQTLKEAFAP 118
+ KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+ +K AFAP
Sbjct: 84 KIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAP 142
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 143 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 202
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ S+TK +++D+V NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRV
Sbjct: 203 ---PKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRV 259
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPN 298
F +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 260 FPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQ-------QQN 312
Query: 299 STAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 313 QIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 358
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 219 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 275
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 276 AAHAIVSVNGTTIEGHVVKCYWG 298
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/395 (46%), Positives = 231/395 (58%), Gaps = 64/395 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 40 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 99
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 100 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 159
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 160 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 219
Query: 172 STRKPPA--------MTNERKR------------------------------QNSHTKTI 193
+TRKPPA E K Q S+TK +
Sbjct: 220 ATRKPPAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQL 279
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +KGY+FV+F + E
Sbjct: 280 SYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 339
Query: 254 TATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
+A HAI S++ T I GH VKC+WGKE+ + Q + PQP Q G
Sbjct: 340 SAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQIGYPQPYG-----------QWG 388
Query: 314 YWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
WY Q Y Q+P + YGQ QG+
Sbjct: 389 QWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 422
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 201/285 (70%), Gaps = 2/285 (0%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ QP T+YVGNLD S+TE+ + LF QIG V KVI + NDPYAF+EF H AA A
Sbjct: 69 EDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQA 128
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRV LEKEMKVNWA+ PG+Q K DTS H+H+FVGDLSPE++ + LK+AFAPFGE+
Sbjct: 129 LQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEV 188
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ +++RD TLKSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP T
Sbjct: 189 SDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG-TGA 247
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
Q ++ + +D+VYNQ+ P N +VY G N+E + F FG I+++R+FK +
Sbjct: 248 GDGQYGRSE-LNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
GYAFV+F K++A +AI ++ ++ G +KC WG+ E +S A
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHSQQA 351
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/389 (49%), Positives = 235/389 (60%), Gaps = 37/389 (9%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN R
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 81
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+
Sbjct: 82 KILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 140
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IR PA + Q ++
Sbjct: 141 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPA---PKSTQENN 197
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F
Sbjct: 198 TKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRF 257
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYN 309
+T E+A HAI S++ T I GH VKC+WGKES P+ T F +
Sbjct: 258 STHESAAHAIVSVNGTTIEGHVVKCYWGKES----------------PDMTK-NFQQVDY 300
Query: 310 QQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQGIPGAQ 363
Q G W Q Y A Q+P + YGQ QG+ G+ W G GAQ
Sbjct: 301 SQWGQWSQVYGNPQQYGQYMANGWQVP-SYGMYGQAWNQQGF-GVDQSPSAAWMGGFGAQ 358
Query: 364 PTAQQMAVAQAQPSM--MAAYAMQQFPTQ 390
P A Q P + A Y M + TQ
Sbjct: 359 P-----AQGQGAPVIPNQAGYGMASYQTQ 382
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 201/285 (70%), Gaps = 2/285 (0%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ QP T+YVGNLD S+TE+ + LF QIG V KVI + NDPYAF+EF H AA A
Sbjct: 69 EDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQA 128
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRV LEKEMKVNWA+ PG+Q K DTS H+H+FVGDLSPE++ + LK+AFAPFGE+
Sbjct: 129 LQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEV 188
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ +++RD TLKSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP T
Sbjct: 189 SDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG-TGA 247
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
Q T+ + +D+VYNQ+ P N +VY G N+E + F FG I+++R+FK +
Sbjct: 248 GDGQYGRTE-LNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
GYAFV+F K++A +AI ++ ++ G +KC WG+ E ++ A
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 351
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 201/285 (70%), Gaps = 2/285 (0%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ QP T+YVGNLD S+TE+ + LF QIG V KVI + NDPYAF+EF H AA A
Sbjct: 42 EDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQA 101
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRV LEKEMKVNWA+ PG+Q K DTS H+H+FVGDLSPE++ + LK+AFAPFGE+
Sbjct: 102 LQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEV 161
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ +++RD TLKSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP T
Sbjct: 162 SDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG-TGA 220
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
Q T+ + +D+VYNQ+ P N +VY G N+E + F FG I+++R+FK +
Sbjct: 221 GDGQYGRTE-LNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 279
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
GYAFV+F K++A +AI ++ ++ G +KC WG+ E ++ A
Sbjct: 280 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 324
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 202/285 (70%), Gaps = 2/285 (0%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ QP T+YVGNLD S+TE+ + LF QIG V KVI + NDPYAF+EF H AA A
Sbjct: 88 EDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQA 147
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMNKRV LEKEMKVNWA+ PG+Q K DTS H+H+FVGDLSPE++ + LK+AFAPFGE+
Sbjct: 148 LQAMNKRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEV 207
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ +++RD TLKSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP T
Sbjct: 208 SDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG-TGA 266
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
Q ++ + +D+VYNQ+ P N +VY G + N+E + F FG I+++R+FK +
Sbjct: 267 GDGQYGRSE-LNYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQ 325
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
GYAFV+F K++A +AI ++ ++ G +KC WG+ E ++ A
Sbjct: 326 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHNQQA 370
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/331 (53%), Positives = 222/331 (67%), Gaps = 19/331 (5%)
Query: 19 VTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMK 77
VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA ALAAMN R + KE+K
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVK 60
Query: 78 VNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSK 137
VNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+D T KSK
Sbjct: 61 VNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSK 119
Query: 138 GYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDE 197
GY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + S+TK +++DE
Sbjct: 120 GYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PKSTYESNTKQLSYDE 176
Query: 198 VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATH 257
V +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +KGY+FV+F++ E+A H
Sbjct: 177 VVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAH 236
Query: 258 AIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY- 316
AI S++ T I GH VKC+WGKE+ + Q Q N +P Y Q G WY
Sbjct: 237 AIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG--YPPTYG-QWGQWYG 286
Query: 317 --PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Q Y Q+P + YGQ QG+
Sbjct: 287 NAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 316
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+Y G + +TE+L+ FS G + +V + G Y+F+ F H AA A+ ++N
Sbjct: 187 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFSSHESAAHAIVSVNG 243
Query: 69 RVFLEKEMKVNWA 81
+K W
Sbjct: 244 TTIEGHVVKCYWG 256
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 201/290 (69%), Gaps = 6/290 (2%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LF QIGP K CK+I + G+DPY F+EF H A +AAMN R
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGR 60
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTS+H+H+FVGDLSPEI T +K AF PFG+IS+CR+V+
Sbjct: 61 KILGKEVKVNWATTPTSQ-KKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVK 119
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKP T
Sbjct: 120 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQ 179
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
++FDEV NQSSP+NCTVYCGG L E+++ + FSPFG I++IRVF +KGY+FV+F
Sbjct: 180 ---LSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVRF 236
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENN-STLAQPSAPTTPQPN 298
+ E A HAI S++ T I G+ VKC+WGKE+ + S + Q P P+
Sbjct: 237 NSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVSPMQQVQMPQVGSPS 286
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 26/189 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T + + A F G + C+V+++ + Y F+ F + A
Sbjct: 81 DTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 140
Query: 60 ATALAAMNKRVFLEKEMKVNWAS-----------------SPGNQPKQDTSNHYHIFVGD 102
A+ M + ++++ NWA+ S Q + ++ ++ G
Sbjct: 141 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGG 200
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG I R+ D KGY+FV F A +AI ++NG +
Sbjct: 201 VTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGTTI 254
Query: 163 GSRSIRTNW 171
++ W
Sbjct: 255 EGYVVKCYW 263
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 203/291 (69%), Gaps = 44/291 (15%)
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ S HYHIFVGDLSPEIETQTL+EAFAPFGEIS+CR+VRDPQT+KSKGY FVSFVKKAEA
Sbjct: 55 NKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAEA 114
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
E+AI AMNGQWLGSRSIRTNW+TRKPPA +E ++TK +TFDEVYNQSSPTNCTVY
Sbjct: 115 ESAIGAMNGQWLGSRSIRTNWATRKPPAPKSE-----ANTKPLTFDEVYNQSSPTNCTVY 169
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGG L EEL+ K FSPFG+I +IRVFK+KGYAF++F+TKE+ATHAI ++HNTDING
Sbjct: 170 CGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQ 229
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYI----------------------- 307
TVKC WGKES + + Q T Q S+A +PY
Sbjct: 230 TVKCSWGKESGDPNNAQQ-----TGQALSSA-TYPYYAAAAAAAAAAAGVAGVGGVVGGS 283
Query: 308 YNQQMGYWYPQAAAYTATAAQLP-------QQFYQYGQL-GYPQG-YVGMV 349
Q+GYWYP +Y TA Q+ Q Y YGQ GY Q Y+G +
Sbjct: 284 SAGQLGYWYP-PQSYPTTATQMQAGGFLQGMQGYTYGQFAGYQQAQYMGQL 333
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTV 58
++S+ ++VG+L + + L F+ G + C+V+R+P + Y F+ FV
Sbjct: 54 VNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAE 113
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPK---------------QDTSNHYHIFVGDL 103
A +A+ AMN + + ++ NWA+ PK Q + + ++ G L
Sbjct: 114 AESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTNCTVYCGGL 173
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ + + +++ F+PFG I R+ +D KGYAF+ F K A +AI A++ +
Sbjct: 174 TNGLTEELMQKTFSPFGSIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNTDIN 227
Query: 164 SRSIRTNW 171
++++ +W
Sbjct: 228 GQTVKCSW 235
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G L +TEEL+ FS G ++ +V ++ G YAF+ F A
Sbjct: 159 NQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKG---YAFIRFSTKESAT 215
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ A++ + +K +W G+
Sbjct: 216 HAIVAVHNTDINGQTVKCSWGKESGD 241
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/277 (62%), Positives = 200/277 (72%), Gaps = 30/277 (10%)
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ S HYHIFVGDLSPEIETQTL+EAFAPFGEIS+CR+VRDPQTLKSKGY FVSFVKKAEA
Sbjct: 50 NKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEA 109
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
E+AI AMNGQWLGSRSIRTNW+TRKPPA +E ++ K +TFDEVYNQSSPTNCTVY
Sbjct: 110 ESAIGAMNGQWLGSRSIRTNWATRKPPAPKSE-----ANAKPLTFDEVYNQSSPTNCTVY 164
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGG L EEL+ K FSPFG+I +IRVFK+KGYAF++F+TKE+ATHAI ++HNTDING
Sbjct: 165 CGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQ 224
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQM---------GYWYPQAAA 321
TVKC WGKES + + Q T Q S+A +PY GYWYP +
Sbjct: 225 TVKCSWGKESGDPNNAQQ-----TGQALSSA-TYPYYAAAAAAAAAAAGVAGYWYP-PQS 277
Query: 322 YTATAAQLP-------QQFYQYGQL-GYPQG-YVGMV 349
Y TA Q+ Q Y YGQ GY Q Y+G +
Sbjct: 278 YPTTATQMQAGGFLQGMQGYTYGQFAGYQQAQYMGQL 314
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 24/187 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
++S+ ++VG+L + + L F+ G + C+V+R+P + Y F+ FV A
Sbjct: 50 NKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEA 109
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK---------------QDTSNHYHIFVGDLS 104
+A+ AMN + + ++ NWA+ PK Q + + ++ G L+
Sbjct: 110 ESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLT 169
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ + +++ F+PFG I R+ +D KGYAF+ F K A +AI A++ +
Sbjct: 170 NGLTEELMQKTFSPFGSIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNTDING 223
Query: 165 RSIRTNW 171
++++ +W
Sbjct: 224 QTVKCSW 230
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G L +TEEL+ FS G ++ +V ++ G YAF+ F A
Sbjct: 154 NQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKG---YAFIRFSTKESAT 210
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ A++ + +K +W G+
Sbjct: 211 HAIVAVHNTDINGQTVKCSWGKESGD 236
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/199 (77%), Positives = 169/199 (84%), Gaps = 3/199 (1%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
TLYVGNLD SVTEEL+ ALF+QIGPV GCK+I EPGNDPY F+EF H AA AL AMNK
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGNDPYCFVEFTDHQAAAAALLAMNK 60
Query: 69 RVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV 128
R L KEMKVNWA+SPGN PKQDTS HYHIFVGDLSPEIETQ LKEAFAPFGEIS+CR+V
Sbjct: 61 RQCLGKEMKVNWATSPGNTPKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVV 120
Query: 129 RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNS 188
RDPQTLKSKGY FVSFVKK +AENAI MNGQWLGSR+IRTNW+TRKPPA R + +
Sbjct: 121 RDPQTLKSKGYGFVSFVKKTDAENAIATMNGQWLGSRAIRTNWATRKPPA---SRSQNET 177
Query: 189 HTKTITFDEVYNQSSPTNC 207
+ K +TFDEVYNQSSPTNC
Sbjct: 178 NAKPLTFDEVYNQSSPTNC 196
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L P + + + F G + C+I+ +P + Y FV F A A+ AM
Sbjct: 2 LYVGNLDPSVTEELILALFTQIGPVIGCKIIHEP---GNDPYCFVEFTDHQAAAAALLAM 58
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + ++ NW+T P T + Q + + ++ G +
Sbjct: 59 NKRQCLGKEMKVNWATS--PGNTPK------------------QDTSKHYHIFVGDLSPE 98
Query: 218 LNEELVSKVFSPFGTIVDIRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+ + + + F+PFG I D RV K KGY FV F K A +AI +++ +
Sbjct: 99 IETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAIATMNGQWLGSRA 158
Query: 272 VKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQ 310
++ W +T P++ + + N+ F +YNQ
Sbjct: 159 IRTNW-------ATRKPPASRSQNETNAKPLTFDEVYNQ 190
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L + + L F+ G + C+V+R+P + Y F+ FV T A
Sbjct: 83 DTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKTDA 142
Query: 60 ATALAAMNKRVFLEKEMKVNWAS 82
A+A MN + + ++ NWA+
Sbjct: 143 ENAIATMNGQWLGSRAIRTNWAT 165
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/341 (54%), Positives = 221/341 (64%), Gaps = 58/341 (17%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
+PKQ +HIFVGDLS EIETQ LK+AF PFGEIS+CR+VRDPQTLKSKGY FVSFVK
Sbjct: 63 KPKQ-----FHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVK 117
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
K+EAE AITAMNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSPTN
Sbjct: 118 KSEAETAITAMNGQWLGSRSIRTNWATRKPPA-----TKADMNIKPLTFDEVYNQSSPTN 172
Query: 207 CTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESI 262
CTVYCGG LNEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI ++
Sbjct: 173 CTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAV 232
Query: 263 HNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY-----------IYNQQ 311
+NT+IN VKC WGKES + + ++ + + A FP+ Y QQ
Sbjct: 233 NNTEINQQPVKCAWGKESGDPNHMSAIAG------QALAQGFPFGSAAAAAAAAAAYGQQ 286
Query: 312 M-GYWYPQAAAYTATA---AQLPQQFYQ------YGQL-GYPQG-YVGMVGRQVPG-WQG 358
+ GYWYP A Y A A P QF Q YGQ GY Q Y+GM G Q+PG WQ
Sbjct: 287 VAGYWYPPAPTYPTAAPASALQPGQFLQGMQGFTYGQFAGYQQASYMGM-GVQLPGTWQS 345
Query: 359 IPGAQP------------TAQQMAVAQAQPSMMAAYAMQQF 387
+P QP Q + A Q + + AY MQQF
Sbjct: 346 VP-PQPQLTSAAAAAAPQITQSVGGALPQAAGVVAYPMQQF 385
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ FV + A TA+ AM
Sbjct: 69 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 128
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDLSPEI 107
N + + ++ NWA+ K D + F G LS +
Sbjct: 129 NGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 188
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I R+ +D KGYAFV F K A +AI A+N + + +
Sbjct: 189 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 242
Query: 168 RTNW 171
+ W
Sbjct: 243 KCAW 246
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 166 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 222
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 223 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 268
Query: 117 APFG 120
PFG
Sbjct: 269 -PFG 271
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/275 (52%), Positives = 196/275 (71%), Gaps = 7/275 (2%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
+P TLYVGNLD SV+E+L+ LF+QIG V KVI + NDPYAF+EF+ H+ A+ AL
Sbjct: 41 DEPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDPYAFVEFLDHSQASQALQ 100
Query: 65 AMNKRVFLEKEMKVNWASSPGNQP-KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
MNKR+ L++EMKVNWA PG QP K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S
Sbjct: 101 TMNKRLLLDREMKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 160
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP
Sbjct: 161 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD----- 215
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
+ + +H +FDE+YNQ+S N +VY G +L+E+ + + F+ +G I ++R+FK +G
Sbjct: 216 QEKPTHYNEKSFDEIYNQTSGDNTSVYVGNIA-NLSEDEIRQAFASYGRISEVRIFKMQG 274
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
YAFVKF K+ A AI ++N ++ G V+C WGK
Sbjct: 275 YAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGK 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 127 VDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 186
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 187 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQTSGDNTSVYVGNI 246
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ + +++AFA +G IS RI K +GYAFV F K A AI MN Q +G
Sbjct: 247 A-NLSEDEIRQAFASYGRISEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQEVG 299
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 300 GQLVRCSW 307
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 223/363 (61%), Gaps = 36/363 (9%)
Query: 36 GCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
G V++ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH
Sbjct: 118 GFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNH 176
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 177 FHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIV 236
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWLG R IRTNW+TRKPPA + Q + TK + F++V NQSSP NCTVYCGG
Sbjct: 237 HMGGQWLGGRQIRTNWATRKPPA---PKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIA 293
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+
Sbjct: 294 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 353
Query: 276 WGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQL 329
WGKES P+ T F + Q G W Q Y A Q+
Sbjct: 354 WGKES----------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQV 396
Query: 330 PQQFYQYGQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM--MAAYAMQQF 387
P + YGQ QG+ G+ W G GAQP A Q P + A Y M +
Sbjct: 397 P-SYGMYGQAWNQQGF-GVDQSPSAAWMGGFGAQP-----AQGQGAPVIPNQAGYGMASY 449
Query: 388 PTQ 390
TQ
Sbjct: 450 QTQ 452
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 172 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 231
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGD 102
A+ M + ++++ NWA+ PK Q + + ++ G
Sbjct: 232 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGG 291
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 292 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 345
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 346 EGHVVKCYWGKESPDMTKN 364
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 189/250 (75%), Gaps = 5/250 (2%)
Query: 32 GPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
GP K CK+I E NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+
Sbjct: 1 GPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KK 59
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +A
Sbjct: 60 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 119
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
ENAI M GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVY
Sbjct: 120 ENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVY 176
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGG L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH
Sbjct: 177 CGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGH 236
Query: 271 TVKCFWGKES 280
VKC+WGKES
Sbjct: 237 VVKCYWGKES 246
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 60 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 119
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 120 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 179
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 180 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 233
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 234 EGHVVKCYWGKESPDMTKN 252
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/282 (51%), Positives = 192/282 (68%), Gaps = 7/282 (2%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
+P TLYVGNLD +VTE+ + LF+QIG V KVI + NDPYAF+EF H A+ AL
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQ 102
Query: 65 AMNKRVFLEKEMKVNWASSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
MNKR+ L++EMKVNWA PG Q K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S
Sbjct: 103 TMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP
Sbjct: 163 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD----- 217
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
+ + SH ++DE+YNQ+S N +VY G L E+ + + F+ FG I ++R+FK +G
Sbjct: 218 QEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQG 276
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
YAFVKF K+ A AI ++N D+ G V+C WGK + T
Sbjct: 277 YAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKTGDTGKT 318
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 129 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 188
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 189 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI 248
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++ FA FG I+ RI K +GYAFV F K A AI MN Q +G
Sbjct: 249 ASLTEDE-IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVG 301
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 302 GQLVRCSW 309
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 221/363 (60%), Gaps = 33/363 (9%)
Query: 36 GCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
G V++ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH
Sbjct: 16 GFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNH 74
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 75 FHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIV 134
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG
Sbjct: 135 HMGGQWLGGRQIRTNWATRKPPA---PKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIA 191
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+
Sbjct: 192 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 251
Query: 276 WGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQL 329
WGKES P+ T F + Q G W Q Y A Q+
Sbjct: 252 WGKES----------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQV 294
Query: 330 PQQFYQYGQLGYPQGYVGMVGRQVP--GWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQF 387
P YG G P G Q P W G GAQP Q P A Y M F
Sbjct: 295 P----PYGVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASF 350
Query: 388 PTQ 390
PTQ
Sbjct: 351 PTQ 353
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGD 102
A+ M + ++++ NWA+ PK Q + + ++ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 244 EGHVVKCYWGKESPDMTKN 262
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
+P TLYVGNLD SV+E+ + LF+QIG V KVI + NDPYAF+EF H A+ AL
Sbjct: 39 DEPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHGQASQALQ 98
Query: 65 AMNKRVFLEKEMKVNWASSPGNQP-KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
MNKR+ ++EMKVNWA PG QP K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S
Sbjct: 99 TMNKRLLHDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVS 158
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP ++
Sbjct: 159 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---GDQE 215
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
K N + K ++DEVYNQ+S N +VY G +L E+ + + F+ +G I ++R+FK +G
Sbjct: 216 KPSNYNEK--SYDEVYNQTSGDNTSVYVGNIA-NLTEDEIRQAFASYGRISEVRIFKMQG 272
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
YAFVKF K A AI ++N D+ G V+C WGK
Sbjct: 273 YAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGK 307
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 125 IDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 184
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 185 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNI 244
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++AFA +G IS RI K +GYAFV F K A AIT MN Q +G
Sbjct: 245 ANLTEDE-IRQAFASYGRISEVRI------FKMQGYAFVKFENKNAAAKAITEMNNQDVG 297
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 298 GQMVRCSW 305
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 193/280 (68%), Gaps = 17/280 (6%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
+P TLYVGNLD +V+E+ + LF+QIG V KVI + NDPYAF+EF H A+ AL
Sbjct: 39 DEPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDPYAFVEFSDHAQASQALQ 98
Query: 65 AMNKRVFLEKEMKVNWASSPGNQP-KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
MNKR+ L++EMKVNWA PG QP K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S
Sbjct: 99 TMNKRLLLDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 158
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-----PA 178
+ +++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP P
Sbjct: 159 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPV 218
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
NE+ ++DE+YNQ+S N +VY G +L+EE + + F+ +G I ++R+
Sbjct: 219 HYNEK----------SYDEIYNQTSGDNTSVYVGNIA-NLSEEDIRQAFASYGRISEVRI 267
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
FK +GYAFVKF K+ A AI ++N ++ G V+C WGK
Sbjct: 268 FKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGK 307
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 125 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 184
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 185 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNI 244
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ + + +++AFA +G IS RI K +GYAFV F K A AI MN Q +G
Sbjct: 245 A-NLSEEDIRQAFASYGRISEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQEVG 297
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 298 GQLVRCSW 305
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/196 (73%), Positives = 166/196 (84%), Gaps = 7/196 (3%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
HYHIFVGDLSPEIETQ L++AFAPFGEIS+CR+VRDPQTLKSKGY FVSF+KK+EAE+AI
Sbjct: 53 HYHIFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAI 112
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
TAMNGQWLGSRSIRTNW+TRKPPA NE ++K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 113 TAMNGQWLGSRSIRTNWATRKPPAPKNEL-----NSKPLTFDEVYNQSSPTNCTVYCGGL 167
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
L EEL+ K F PFGTI +IRVFK+KGYAF++F+TKE+ATHAI ++HN D+NG VKC
Sbjct: 168 TAGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNADVNGAPVKC 227
Query: 275 FWGKES--ENNSTLAQ 288
WGKES NN+ AQ
Sbjct: 228 SWGKESGDPNNAQGAQ 243
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 67 NKRVFLEKEMKVNWASSPGNQPK---------------QDTSNHYHIFVGDLSPEIETQT 111
N + + ++ NWA+ PK Q + + ++ G L+ + +
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+++ F PFG I R+ +D KGYAF+ F K A +AI A++ + ++ +W
Sbjct: 176 MQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNADVNGAPVKCSW 229
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G L +TEEL+ F G ++ +V ++ G YAF+ F A
Sbjct: 153 NQSSPTNCTVYCGGLTAGLTEELMQKTFQPFGTIQEIRVFKDKG---YAFIRFSTKESAT 209
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ A++ +K +W G+
Sbjct: 210 HAIVAVHNADVNGAPVKCSWGKESGD 235
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/349 (52%), Positives = 219/349 (62%), Gaps = 66/349 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 166 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 222
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 223 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 275
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 276 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 335
Query: 265 TDINGHTVKCFWGKES--ENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM 312
T+IN VKC WGKES NNS S + ++ A FPY Y QQ+
Sbjct: 336 TEINAQPVKCSWGKESGDPNNSQ----SMASQALNSAAAAGFPYGVSAAAAAAAAYGQQL 391
Query: 313 ---GYWYPQAAAYTATAA-------------------QLPQ-----QFYQYGQLGYPQGY 345
G WY Y ++A Q Q F QYG GY QGY
Sbjct: 392 AATGCWYSPTPTYPTSSATAAAVTPAAAAASAAAVQNQFLQGIQGYHFSQYG--GYQQGY 449
Query: 346 VGMVGRQVPG-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
+GM G Q+P WQG+ AQ + AQQ+A A Q + + AY +QQF
Sbjct: 450 MGM-GVQIPATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYPIQQF 497
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 233 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 292
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 293 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 346
Query: 171 W 171
W
Sbjct: 347 W 347
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 215/332 (64%), Gaps = 52/332 (15%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
+HIFVGDLS EIETQ LK+AF PFGEIS+CR+VRDPQTLKSKGY FVSFVKK+EAE AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
TAMNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGI 209
Query: 215 GKD----LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
LNEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN
Sbjct: 210 NGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQ 269
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM-GYWY--- 316
VKC WGKES + + ++ + + A FP+ Y QQ+ GYWY
Sbjct: 270 PVKCAWGKESGDPNHMSAIAG------GALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPA 323
Query: 317 ----PQAAAYTATAAQLPQ--QFYQYGQL-GYPQ-GYVGMVGRQVPG-WQGIPGAQP--- 364
A A Q Q Q + YGQ GY Q GY+GM G Q+PG WQ +P QP
Sbjct: 324 PTYPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMGM-GVQLPGTWQSVP-PQPQLA 381
Query: 365 ---------TAQQMAVAQAQPSMMAAYAMQQF 387
Q + A Q + + AY MQQF
Sbjct: 382 SAAAATAPQITQSVGSALPQAAGVVAYPMQQF 413
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ FV + A TA+ AM
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDLSPEI 107
N + + ++ NWA+ K D + F G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I R+ +D KGYAFV F K A +AI A+N + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 168 RTNW 171
+ W
Sbjct: 272 KCAW 275
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 185/245 (75%), Gaps = 4/245 (1%)
Query: 36 GCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
G V++ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH
Sbjct: 16 GFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNH 74
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 75 FHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIV 134
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG
Sbjct: 135 HMGGQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIA 191
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+
Sbjct: 192 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 251
Query: 276 WGKES 280
WGKES
Sbjct: 252 WGKES 256
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 244 EGHVVKCYWGKESPDMTKN 262
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 215/332 (64%), Gaps = 52/332 (15%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
+HIFVGDLS EIETQ LK+AF PFGEIS+CR+VRDPQTLKSKGY FVSFVKK+EAE AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
TAMNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGI 209
Query: 215 GKD----LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
LNEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN
Sbjct: 210 NGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQ 269
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM-GYWY--- 316
VKC WGKES + + ++ + + A FP+ Y QQ+ GYWY
Sbjct: 270 PVKCAWGKESGDPNHMSAIAG------GALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPA 323
Query: 317 ----PQAAAYTATAAQLPQ--QFYQYGQL-GYPQ-GYVGMVGRQVPG-WQGIPGAQP--- 364
A A Q Q Q + YGQ GY Q GY+GM G Q+PG WQ +P QP
Sbjct: 324 PTYPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMGM-GVQLPGTWQSVP-PQPQLA 381
Query: 365 ---------TAQQMAVAQAQPSMMAAYAMQQF 387
Q + A Q + + AY MQQF
Sbjct: 382 SAAAATAPQITQSVGSALPQAAGVVAYPMQQF 413
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ FV + A TA+ AM
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDLSPEI 107
N + + ++ NWA+ K D + F G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I R+ +D KGYAFV F K A +AI A+N + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 168 RTNW 171
+ W
Sbjct: 272 KCAW 275
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/360 (49%), Positives = 218/360 (60%), Gaps = 33/360 (9%)
Query: 39 VIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHI 98
+ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+
Sbjct: 2 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHV 60
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M
Sbjct: 61 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 120
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L
Sbjct: 121 GQWLGGRQIRTNWATRKPPA---PKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGK
Sbjct: 178 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Query: 279 ESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQ 332
ES P+ T F + Q G W Q Y A Q+P
Sbjct: 238 ES----------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP-- 278
Query: 333 FYQYGQLGYPQGYVGMVGRQVP--GWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
YG G P G Q P W G GAQP Q P A Y M FPTQ
Sbjct: 279 --PYGVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ 336
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGD 102
A+ M + ++++ NWA+ PK Q + + ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 227 EGHVVKCYWGKESPDMTKN 245
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 185/245 (75%), Gaps = 4/245 (1%)
Query: 36 GCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
G V++ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH
Sbjct: 16 GFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNH 74
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 75 FHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIV 134
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG
Sbjct: 135 HMGGQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIA 191
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+
Sbjct: 192 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 251
Query: 276 WGKES 280
WGKES
Sbjct: 252 WGKES 256
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 244 EGHVVKCYWGKESPDMTKN 262
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/357 (48%), Positives = 219/357 (61%), Gaps = 40/357 (11%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 39 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 98
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 99 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 158
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS S + + +K ++AENAI M GQWLG R IRTNW
Sbjct: 159 IKAAFAPFGRIS------------SNQFYMNAIIKFSDAENAIQQMGGQWLGGRQIRTNW 206
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 207 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 263
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 264 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------ 317
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 318 PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 369
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 182/242 (75%), Gaps = 4/242 (1%)
Query: 39 VIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHI 98
+ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+
Sbjct: 2 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHV 60
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M
Sbjct: 61 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 120
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L
Sbjct: 121 GQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGK
Sbjct: 178 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Query: 279 ES 280
ES
Sbjct: 238 ES 239
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 227 EGHVVKCYWGKESPDMTKN 245
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 224/360 (62%), Gaps = 31/360 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ ++ DE P E+L+ + FSPFG I++IRVF +
Sbjct: 181 TFESRSGPLSPRVPDEAVQSVLPA-------------PEQLMRQTFSPFGQIMEIRVFPD 227
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + +A P PQ +
Sbjct: 228 KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETAD---MAGP----VPQGQLS- 279
Query: 302 PQFPYIYNQQMGYWY--PQAAAYTATAAQLPQQFYQYGQLGYPQGYV--GMVGRQVPGWQ 357
+P Y Q G WY Q Y Q+P + YGQ QG+ G + R PG++
Sbjct: 280 --YPPAYG-QWGQWYGGAQLGQYVPNGWQVP-AYGVYGQAWSQQGFGQNGPLVRAQPGFR 335
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 216/347 (62%), Gaps = 60/347 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 173 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 229
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 230 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 282
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+ +G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 283 TVYVGGVNSALTALSEEILQKTFALYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 342
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM-- 312
T+IN VKC WGKES + + ++ + A FPY Y QQ+
Sbjct: 343 TEINAQPVKCSWGKESGDPNNSQTMASQALNSAAAAAAGFPYGVSAAAAAAAAYGQQLAA 402
Query: 313 -GYWYPQAAAYTATAA-------------------QLPQ-----QFYQYGQLGYPQGYVG 347
G WY Y ++A Q Q F QYG GY QGY+G
Sbjct: 403 TGCWYSPTPTYPTSSAPTAAVTPAAAAASAAAVQNQFLQGIQGYHFSQYG--GYQQGYMG 460
Query: 348 MVGRQVPG-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
M G Q+P WQG+ AQ + AQQ+A A Q + + AY +QQF
Sbjct: 461 M-GVQIPATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYPIQQF 506
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 240 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 299
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FA +G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 300 ILQKTFALYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 353
Query: 171 W 171
W
Sbjct: 354 W 354
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 182/242 (75%), Gaps = 4/242 (1%)
Query: 39 VIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHI 98
+ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+
Sbjct: 2 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHV 60
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M
Sbjct: 61 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 120
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L
Sbjct: 121 GQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGK
Sbjct: 178 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Query: 279 ES 280
ES
Sbjct: 238 ES 239
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 227 EGHVVKCYWGKESPDMTKN 245
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/236 (61%), Positives = 181/236 (76%), Gaps = 4/236 (1%)
Query: 45 NDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLS 104
NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLS
Sbjct: 3 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLS 61
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
PEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG
Sbjct: 62 PEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 121
Query: 165 RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+
Sbjct: 122 RQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMR 178
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 179 QTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 234
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 48 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 107
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-----------------IFVGD 102
A+ M + ++++ NWA+ PK N+ ++ G
Sbjct: 108 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 167
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 168 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 221
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 222 EGHVVKCYWGKESPDMTKN 240
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/346 (50%), Positives = 215/346 (62%), Gaps = 57/346 (16%)
Query: 89 KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 148
++ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK+
Sbjct: 38 RRRRQKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKS 97
Query: 149 EAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCT 208
EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NCT
Sbjct: 98 EAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNCT 150
Query: 209 VYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNT 265
VY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HNT
Sbjct: 151 VYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 210
Query: 266 DINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM--- 312
+IN VKC WGKES + + ++ + A FPY Y QQ+
Sbjct: 211 EINAQPVKCSWGKESGDPNNSQTMASQALNSAAAAAAGFPYGVSAAAAAAAAYGQQLAAT 270
Query: 313 GYWYPQAAAYTATAA-------------------QLPQ-----QFYQYGQLGYPQGYVGM 348
G WY Y A++ Q Q F QYG GY QGY+GM
Sbjct: 271 GCWYSPTPTYPASSVTAAAATPAAAAANAAAVQNQFLQGIQGYHFSQYG--GYQQGYMGM 328
Query: 349 VGRQVPG-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
G Q+P WQG+ AQ + AQQ+A A Q + + AY +QQF
Sbjct: 329 -GVQIPATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYPIQQF 373
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 47 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 106
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 107 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 166
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 167 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 220
Query: 171 W 171
W
Sbjct: 221 W 221
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 3 DESQPT--TLYVGNLDVSVT---EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHT 57
++S P+ T+YVG ++ ++T EE+L F+ G ++ +V ++ G YAF+ F
Sbjct: 142 NQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKG---YAFVRFSTKE 198
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGN 86
A A+ ++ + +K +W G+
Sbjct: 199 AATHAIVGVHNTEINAQPVKCSWGKESGD 227
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 167/357 (46%), Positives = 211/357 (59%), Gaps = 61/357 (17%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
++ P TLYVGNL VTE L+ LFSQIGP K CK+I +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD-------------------- 41
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIETQT 111
E+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI T+
Sbjct: 42 ------------EVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 88
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 89 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 148
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG
Sbjct: 149 ATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 205
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ +
Sbjct: 206 QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN------ 259
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P Q PQ PY Q G WY Q Y Q+P + YGQ QG+
Sbjct: 260 PVQQQNQIGYPQ-PY---GQWGQWYGNAQQIGQYMPNGWQVP-TYGMYGQAWNQQGF 311
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 150/249 (60%), Positives = 185/249 (74%), Gaps = 5/249 (2%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Query: 242 KGYAFVKFT 250
KGY+FV+ T
Sbjct: 238 KGYSFVRQT 246
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T ++++K ++H V+ G +
Sbjct: 67 NGRKIMGKEVKVNWATTP----SSQKKDTSNHFH-----------------VFVGDLSPE 105
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGHT 271
+ E + F+PFG I D RV K+ KGY FV F K A +AI+ + + G
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 272 VKCFW 276
++ W
Sbjct: 166 IRTNW 170
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 150/249 (60%), Positives = 185/249 (74%), Gaps = 5/249 (2%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 69
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 70 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 128
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 185
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 186 PKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 245
Query: 242 KGYAFVKFT 250
KGY+FV+ T
Sbjct: 246 KGYSFVRQT 254
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 74
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T ++++K ++H V+ G +
Sbjct: 75 NGRKIMGKEVKVNWATTP----SSQKKDTSNHFH-----------------VFVGDLSPE 113
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGHT 271
+ E + F+PFG I D RV K+ KGY FV F K A +AI+ + + G
Sbjct: 114 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 173
Query: 272 VKCFW 276
++ W
Sbjct: 174 IRTNW 178
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 213/341 (62%), Gaps = 52/341 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 159 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 215
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 216 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 268
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 269 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 328
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY------------IYNQQM 312
T+IN VKC WGKES + + + + A FPY
Sbjct: 329 TEINAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQLAAT 388
Query: 313 GYWYPQAAAYTATAA----------------QLPQ--QFYQYGQL-GYPQGYVGMVGRQV 353
G WY Y A++A Q Q Q Y + Q GY QGY+GM G Q+
Sbjct: 389 GCWYSPTPTYPASSATAAAVTPAANAAAVQNQFLQGIQGYHFSQYAGYQQGYMGM-GVQI 447
Query: 354 PG-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
P WQG+ AQ + AQQ+A A Q + + AY +QQF
Sbjct: 448 PATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYPIQQF 488
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 171 W 171
W
Sbjct: 340 W 340
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/336 (49%), Positives = 206/336 (61%), Gaps = 29/336 (8%)
Query: 39 VIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHI 98
+ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+
Sbjct: 2 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHV 60
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M
Sbjct: 61 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 120
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
GQWLG R IRTNW+TRKPPA + Q S TK + F++V NQSSP NCTVYCGG L
Sbjct: 121 GQWLGGRQIRTNWATRKPPA---PKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
++L+ + FSPFG I++ R F KGY+FV+F+T E+A HAI S++ T I GH VKC+WGK
Sbjct: 178 TDQLMRQTFSPFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Query: 279 ESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQ 332
ES P+ T F + Q G W Q Y Q+P
Sbjct: 238 ES----------------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYVTNGWQVP-S 279
Query: 333 FYQYGQLGYPQGYVGMVGRQVPGWQGIPGAQPTAQQ 368
+ YGQ QG+ G+ W GAQP Q
Sbjct: 280 YGMYGQAWNQQGF-GVDQTPSAAWMSGFGAQPAQGQ 314
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGD 102
A+ M + ++++ NWA+ PK Q + + ++ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R KGY+FV F A +AI ++NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQILETR------AFPGKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 227 EGHVVKCYWGKESPDMTKN 245
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/247 (59%), Positives = 184/247 (74%), Gaps = 5/247 (2%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ +TK +++DEV +QSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF +
Sbjct: 178 PKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPD 237
Query: 242 KGYAFVK 248
KGY+F++
Sbjct: 238 KGYSFIR 244
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T ++++K ++H V+ G +
Sbjct: 67 NGRKIMGKEVKVNWATTP----SSQKKDTSNHFH-----------------VFVGDLSPE 105
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGHT 271
+ E + F+PFG I D RV K+ KGY FV F K A +AI+ + + G
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 272 VKCFW 276
++ W
Sbjct: 166 IRTNW 170
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 222/413 (53%), Gaps = 83/413 (20%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--------PGNDPY----AF 50
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + P D Y F
Sbjct: 38 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRPAGHMWPAEDIYLARQVF 97
Query: 51 LEFVHHTVAATALAAMNKRVFLE---KEMKVNWASSPGNQPKQDTS-----------NHY 96
L + + + R + E+KVNWA++P +Q K+DTS +H+
Sbjct: 98 LLPPRVLLCSRLVLGPQSRPVVRPSNSEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHF 156
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 157 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 216
Query: 157 MNGQWLGSRSIRTNWSTRKPPA--------MTNERKR----------------------- 185
M GQWLG R IRTNW+TRKPPA E K
Sbjct: 217 MGGQWLGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEKYTRFKCXSCSRRLIAE 276
Query: 186 ----------QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
Q S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++
Sbjct: 277 IDEKQIKTTVQKSNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIME 336
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q + P
Sbjct: 337 IRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMVNPVQQNQIGYP 396
Query: 296 QPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
QP Q G WY Q Y Q+P + YGQ QG+
Sbjct: 397 QPYG-----------QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 437
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/289 (57%), Positives = 194/289 (67%), Gaps = 40/289 (13%)
Query: 85 GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
GN K + +HIFVGDLS EIETQ LK+AF PFGEIS+CR+VRDPQTLKSKGY FVSF
Sbjct: 89 GNNSKPE---QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSF 145
Query: 145 VKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
VKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSP
Sbjct: 146 VKKSEAETAITAMNGQWLGSRSIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSP 200
Query: 205 TNCTVYCGGFGKDL----NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIE 260
TNCTVYCGG L NEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI
Sbjct: 201 TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIV 260
Query: 261 SIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQ 310
+++NT+IN VKC WGKES P+ + + A FP+ Y Q
Sbjct: 261 AVNNTEINQQPVKCAWGKES------GDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQ 314
Query: 311 QM-GYWYP-------QAAAYTATAAQLPQ--QFYQYGQL-GYPQ-GYVG 347
Q+ GYWYP A A Q Q Q + YGQ GY Q GY+G
Sbjct: 315 QVAGYWYPPAPTYPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMG 363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ FV + A TA+ AM
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDLSPEI 107
N + + ++ NWA+ K D + F G LS +
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I R+ +D KGYAFV F K A +AI A+N + + +
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 272
Query: 168 RTNW 171
+ W
Sbjct: 273 KCAW 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 198 VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV------FKEKGYAFVKFTT 251
V N S P ++ G ++ + + F+PFG I D RV K KGY FV F
Sbjct: 88 VGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVK 147
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQ 310
K A AI +++ + +++ W +P A T N+ F +YNQ
Sbjct: 148 KSEAETAITAMNGQWLGSRSIRTNWATR--------KPPA-TKADMNAKPLTFDEVYNQ 197
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 196 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 252
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGN 86
A A+ A+N ++ +K W G+
Sbjct: 253 EAATHAIVAVNNTEINQQPVKCAWGKESGD 282
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 194/322 (60%), Gaps = 47/322 (14%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------------------------ 40
+P TLYVGNLD +VTE+ + LF+QIG V KVI
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIG 102
Query: 41 --------REP--------GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSP 84
R+P NDPYAF+EF H A+ AL MNKR+ L++EMKVNWA P
Sbjct: 103 VPGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEP 162
Query: 85 GNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
G Q K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S+ +++RD T KSKGY FVS
Sbjct: 163 GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 222
Query: 144 FVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ K+ EAE AI MNGQWLG R+IRTNW+TRKP + + SH ++DE+YNQ+S
Sbjct: 223 YPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD-----QEKPSHYNEKSYDEIYNQTS 277
Query: 204 PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIH 263
N +VY G L E+ + + F+ FG I ++R+FK +GYAFVKF K+ A AI ++
Sbjct: 278 GDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMN 336
Query: 264 NTDINGHTVKCFWGKESENNST 285
N D+ G V+C WGK + T
Sbjct: 337 NQDVGGQLVRCSWGKTGDTGKT 358
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 169 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 228
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 229 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI 288
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++ FA FG I+ RI K +GYAFV F K A AI MN Q +G
Sbjct: 289 ASLTEDE-IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVG 341
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 342 GQLVRCSW 349
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 42/224 (18%)
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
I D +T + YAFV F +A A+ MN + L R ++ NW+ E +Q
Sbjct: 114 IHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAV--------EPGQQ 165
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
S T + V+ G +++ + + + F PFG + D +V ++
Sbjct: 166 QSKIDTT-----------RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTK 214
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
KGY FV + +E A AIE ++ + T++ W +P P +
Sbjct: 215 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--------KPGDQEKP-SHYN 265
Query: 301 APQFPYIYNQQMGYWYPQAAAYTATAAQLP-----QQFYQYGQL 339
+ IYNQ G + Y A L Q F +G++
Sbjct: 266 EKSYDEIYNQTSG---DNTSVYVGNIASLTEDEIRQGFASFGRI 306
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/340 (51%), Positives = 213/340 (62%), Gaps = 50/340 (14%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 167 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 223
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 224 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 276
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 277 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 336
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY--------IYNQQM---G 313
T++N VKC WGKES + + + + A FPY Y QQ+ G
Sbjct: 337 TELNAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGLGATAAAAYGQQLAATG 396
Query: 314 YWYPQAAAYTATAA-----------------QLPQ--QFYQYGQLGYPQGYVGMVGRQVP 354
WY Y A++A Q Q Q Y +GQ G Q +G Q+P
Sbjct: 397 CWYSPTPTYQASSATATAVTPAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMGMGVQIP 456
Query: 355 G-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
WQG+ AQ + AQQMA A Q + + AY +QQF
Sbjct: 457 ATWQGVTQAQISPAQQMATGVAGTAIPQAAGVVAYPIQQF 496
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ L ++ ++ +
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 171 W 171
W
Sbjct: 348 W 348
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/340 (51%), Positives = 213/340 (62%), Gaps = 50/340 (14%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 167 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 223
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 224 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 276
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 277 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 336
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY--------IYNQQM---G 313
T++N VKC WGKES + + + + A FPY Y QQ+ G
Sbjct: 337 TELNAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGLGATAAAAYGQQLAATG 396
Query: 314 YWYPQAAAYTATAA-----------------QLPQ--QFYQYGQLGYPQGYVGMVGRQVP 354
WY Y A++A Q Q Q Y +GQ G Q +G Q+P
Sbjct: 397 CWYSPTPTYQASSATATAVTPAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMGMGVQIP 456
Query: 355 G-WQGIPGAQPT-AQQMAVAQA-----QPSMMAAYAMQQF 387
WQG+ AQ + AQQMA A Q + + AY +QQF
Sbjct: 457 ATWQGVTQAQISPAQQMATGVAGTAIPQAAGVVAYPIQQF 496
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ L ++ ++ +
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 171 W 171
W
Sbjct: 348 W 348
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 187/279 (67%), Gaps = 5/279 (1%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
Y+GNLD TE+ + LF++ G +K CK+I E GNDPY F+E+ AA AL AMN
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
F + +KVNWA+ N + +NHYHIFVGDLSP+I+T L+ AF FG +S+ R+V+
Sbjct: 68 SFGSRAIKVNWAT---NSSMRKDTNHYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVK 124
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T K +GY FVS+ K EAENA+ +MNG WLG R+IRTNW+TRKP A TN + +S
Sbjct: 125 DSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNSDSSS 184
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
TK++ +DE+Y Q++ NCTVY G EE + ++F PFG I DIRVF +K YAF+++
Sbjct: 185 TKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPDKNYAFIRY 244
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+ + AT+AI IH T + G VKC WGKE+ N+ LAQ
Sbjct: 245 MSHDHATNAIVVIHGTAVEGSQVKCSWGKEA-NDPILAQ 282
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 53/241 (21%)
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV-----RDPQTLKSKGYAFVSFVKKAEA 150
Y+ ++G+L + Q++ E FA FG I C+++ DP Y FV + +K A
Sbjct: 5 YYRYIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDP-------YGFVEYAEKNSA 57
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
A+ AMNG GSR+I+ NW+T ++ RK N + ++
Sbjct: 58 ARALDAMNGYSFGSRAIKVNWATN-----SSMRKDTNHY------------------HIF 94
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHN 264
G D++ L+ F+ FG + D RV K+ +GY FV + K A +A++S++
Sbjct: 95 VGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNG 154
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTA 324
+ G ++ W +P A T Q + ++ Y++ Y Q A Y
Sbjct: 155 AWLGGRNIRTNWATR--------KPGATTNRQNSDSSSTKSLNYDE----IYLQTAVYNC 202
Query: 325 T 325
T
Sbjct: 203 T 203
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 29/194 (14%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHT 57
M ++ ++VG+L + LL + F+Q G V +V+++ Y F+ +
Sbjct: 84 MRKDTNHYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKH 143
Query: 58 VAATALAAMNKRVFLEKEMKVNWAS-SPG---NQPKQDTSN----HYH------------ 97
A A+ +MN + ++ NWA+ PG N+ D+S+ +Y
Sbjct: 144 EAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEIYLQTAVYNCT 203
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS +TL+ F PFG I++ R+ D K YAF+ ++ A NAI +
Sbjct: 204 VYVGNLSAGTTEETLRRIFIPFGPIADIRVFPD------KNYAFIRYMSHDHATNAIVVI 257
Query: 158 NGQWLGSRSIRTNW 171
+G + ++ +W
Sbjct: 258 HGTAVEGSQVKCSW 271
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+YVGNL TEE L +F GP+ +V + YAF+ ++ H A A+ ++
Sbjct: 203 TVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPDKN---YAFIRYMSHDHATNAIVVIHG 259
Query: 69 RVFLEKEMKVNWA 81
++K +W
Sbjct: 260 TAVEGSQVKCSWG 272
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/287 (48%), Positives = 189/287 (65%), Gaps = 9/287 (3%)
Query: 7 PTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAM 66
P TL+VGNLD ++T+E L LF+QIG V KV + NDP+AF+EF H A AL AM
Sbjct: 36 PRTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAM 95
Query: 67 NKRVFLEKEMKVNWA---SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N R L++EM+VNWA S PG+ KQ+TS H+H+FVGDLS E+++ L+EAF FG++S
Sbjct: 96 NGRSLLDREMRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVS 155
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+I+RD T K+KGY FVS+ ++ +AE AI MNGQWLG R+IRTNW+TRKP
Sbjct: 156 EAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGE 215
Query: 184 KRQNSHTKTI-----TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+R TFDE+YNQ+S N +VY G + L E+ + + F FG I ++R+
Sbjct: 216 RRDRGERGERRHYEKTFDEIYNQTSADNTSVYVGQINQ-LTEDEIRRAFDRFGPINEVRM 274
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FK +GYAFVKF KE A AI ++N +I G V+C WGK E++++
Sbjct: 275 FKVQGYAFVKFEQKEAAARAIVQMNNAEIQGQQVRCSWGKSGESSAS 321
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 161 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 217
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 218 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 270
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 271 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 330
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 331 TEINAQPVKCSWGKES 346
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 171 W 171
W
Sbjct: 342 W 342
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 160 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 216
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 217 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------NKENIKPLTFDEVYNQSSPSNC 269
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 270 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 329
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 330 TEINAQPVKCSWGKES 345
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 167 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 226
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ P N+ Q + ++ ++VG ++ + +
Sbjct: 227 NGQWLGSRSIRTNWATRKPPANKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 286
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 287 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 340
Query: 171 W 171
W
Sbjct: 341 W 341
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 161 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 217
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 218 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 270
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 271 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 330
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 331 TEINAQPVKCSWGKES 346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 171 W 171
W
Sbjct: 342 W 342
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 159 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 215
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 216 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 268
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 269 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 328
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 329 TEINAQPVKCSWGKES 344
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 171 W 171
W
Sbjct: 340 W 340
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 165 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 221
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 222 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 274
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 275 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 334
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 335 TEINAQPVKCSWGKES 350
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 172 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 231
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 232 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 291
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 292 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 345
Query: 171 W 171
W
Sbjct: 346 W 346
>gi|390177486|ref|XP_003736390.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
gi|388859063|gb|EIM52463.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
Length = 464
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/311 (51%), Positives = 195/311 (62%), Gaps = 58/311 (18%)
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
EIETQ LK+AF PFGEIS+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSR
Sbjct: 113 EIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSR 172
Query: 166 SIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEE 221
SIRTNW+TRKPPA + + + K +TFDEVYNQSSPTNCTVYCGG LNE+
Sbjct: 173 SIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNED 227
Query: 222 LVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES
Sbjct: 228 ILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESG 287
Query: 282 NNSTLAQPSAPTTPQPNSTAPQFPY-----------IYNQQM-GYWYPQAAAYTATAAQL 329
+ + ++ + + A FP+ Y QQ+ GYWYP A Y A
Sbjct: 288 DPNHMSAIAG------QALAQGFPFGSAAAAAAAAAAYGQQVAGYWYPPAPTYPTAAPA- 340
Query: 330 PQQFYQYGQLGYPQGYVGMVGRQVPG-WQGIPGAQPTAQQMAVAQA------------QP 376
++G Q+PG WQ +P AQP A A Q
Sbjct: 341 ----------------SALMGVQLPGTWQSVP-AQPQLAGAAAGTAPQITQSVGNGLPQA 383
Query: 377 SMMAAYAMQQF 387
+ + AY MQQF
Sbjct: 384 TGVVAYPMQQF 394
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 28 FSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSP 84
F+ G + C+V+R+P + Y F+ FV + A TA+ AMN + + ++ NWA+
Sbjct: 123 FTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRK 182
Query: 85 GNQPKQDTSNHYHIFV-------------------GDLSPEIETQTLKEAFAPFGEISNC 125
K D + F G LS + L++ F+P+G I
Sbjct: 183 PPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEI 242
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
R+ +D KGYAFV F K A +AI A+N + + ++ W
Sbjct: 243 RVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAW 282
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ E++L FS G ++ +V ++ G YAF+ F
Sbjct: 202 NQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 258
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 259 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 304
Query: 117 APFG 120
PFG
Sbjct: 305 -PFG 307
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 176 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 232
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 233 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENVKPLTFDEVYNQSSPSNC 285
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 286 TVYVGGVNSALTALSEEILQKTFTPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 345
Query: 265 TDINGHTVKCFWGKES 280
T++N VKC WGKES
Sbjct: 346 TELNAQPVKCSWGKES 361
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 183 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 242
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 243 NGQWLGSRSIRTNWATRKPPASKENVKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 302
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ F P+G I R+ +D KGYAFV F K A +AI ++ L ++ ++ +
Sbjct: 303 ILQKTFTPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 356
Query: 171 W 171
W
Sbjct: 357 W 357
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 155/193 (80%), Gaps = 10/193 (5%)
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
S +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK+EAE+
Sbjct: 208 SEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAES 267
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NCTVY G
Sbjct: 268 AITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNCTVYVG 320
Query: 213 GFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
G L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HNT+IN
Sbjct: 321 GVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINA 380
Query: 270 HTVKCFWGKESEN 282
VKC WGKES +
Sbjct: 381 QPVKCSWGKESGD 393
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 2 CDESQPTT------LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLE 52
CD P ++VG+L + + L F+ G + C+V+R+P + Y F+
Sbjct: 199 CDSGGPVVWSEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVS 258
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIF 99
F+ + A +A+ AMN + + ++ NWA+ P ++ Q + ++ ++
Sbjct: 259 FIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVY 318
Query: 100 VGDLSPEIET---QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
VG ++ + + L++ FAP+G I R+ +D KGYAFV F K A +AI
Sbjct: 319 VGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVG 372
Query: 157 MNGQWLGSRSIRTNW 171
++ + ++ ++ +W
Sbjct: 373 VHNTEINAQPVKCSW 387
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 157/196 (80%), Gaps = 13/196 (6%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PKQ+ +HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK
Sbjct: 161 PKQE---QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKK 217
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+EAE+AITAMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NC
Sbjct: 218 SEAESAITAMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNC 270
Query: 208 TVYCGGFGK---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
TVY GG L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HN
Sbjct: 271 TVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHN 330
Query: 265 TDINGHTVKCFWGKES 280
T+IN VKC WGKES
Sbjct: 331 TEINAQPVKCSWGKES 346
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 67 NKRVFLEKEMKVNWASS--PGNQP-----------KQDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ P ++ Q + ++ ++VG ++ + +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 171 W 171
W
Sbjct: 342 W 342
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 145/302 (48%), Positives = 200/302 (66%), Gaps = 17/302 (5%)
Query: 1 MCDE-SQPTTLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGN-DPYAFLEFVHH 56
MC+E +QP TLYVGNLD VTEEL+ LF QI P K CK+I + GN DPY F+EF
Sbjct: 17 MCEEDAQPRTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGNSDPYCFVEFYDS 76
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ AMN R +K +KVNWA++ G+ ++DT++H+H+FVGDL E++T L+ F
Sbjct: 77 VTAEAAMVAMNGRTVFDKPIKVNWATTQGS--RKDTTHHHHVFVGDLVQEMKTAELRALF 134
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG----QWLGSRSIRTNWS 172
+G I++ R+VRDP+T KS+ Y FVSF ++ +A+ AI MNG Q+ G ++IRT W+
Sbjct: 135 DKYGSITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWA 194
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLN-EELVSKVFSPFG 231
TRKP T+ + Q + ++ V N++SP NCTVY GG + E+L+ KVF PFG
Sbjct: 195 TRKP---TSHKPPQ---IEAKDYERVLNETSPNNCTVYVGGLQFKFSAEDLLRKVFGPFG 248
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
I ++R F EK +AFV+F E+AT+AI S+H + I GH VKC WGKES +S QP A
Sbjct: 249 AIQEVRTFPEKAFAFVRFANHESATNAIVSVHGSPIEGHVVKCSWGKESNESSGFQQPQA 308
Query: 292 PT 293
P+
Sbjct: 309 PS 310
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 188/292 (64%), Gaps = 19/292 (6%)
Query: 7 PTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN--DPYAFLEFVHHTVAATALA 64
P TL+VGNLD +VT+E + LF+Q+G V K+I + DPYAF+EF H AA AL
Sbjct: 37 PRTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGLADPYAFIEFSDHNQAAQALQ 96
Query: 65 AMNKRVFLEKEMKVNWASSPGNQP-----KQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
+MN R L++E++VNWA P NQP K D S H+H+FVGDLS EI++ LKEAF PF
Sbjct: 97 SMNGRQLLDRELRVNWAVEP-NQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPF 155
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP--- 176
GE+S +I+RD T K+KGY FVS+ ++ +AE AI MNGQWLG R+IRTNW++RKP
Sbjct: 156 GEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEE 215
Query: 177 -------PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
ER + T+DE+++Q+SP N +VY G G L E+ + + F
Sbjct: 216 GERRGGGFERDRERGERFHGGFEKTYDEIFHQTSPDNTSVYVGQIGS-LTEDEIRRAFDR 274
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
FG I ++R+FK +GYAFVKF KE A AI ++NT+I G V+C WGK +
Sbjct: 275 FGAINEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTEIMGQMVRCSWGKSGD 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
A G Q + + +FVG+L P + + + F G ++ +I+ D Q L + YA
Sbjct: 23 AEKEGYQLASGSEDPRTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGL-ADPYA 81
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYN 200
F+ F +A A+ +MNG+ L R +R NW+ P + R+ +++
Sbjct: 82 FIEFSDHNQAAQALQSMNGRQLLDRELRVNWAVE--PNQPGDSSRKMDYSR--------- 130
Query: 201 QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKET 254
+ V+ G +++ + + F PFG + + ++ ++ KGY FV + +E
Sbjct: 131 -----HFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPRRED 185
Query: 255 ATHAIESIHNTDINGHTVKCFW 276
A AIE ++ + T++ W
Sbjct: 186 AERAIEQMNGQWLGRRTIRTNW 207
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 40/203 (19%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTV 58
D S+ ++VG+L + L F G V K+IR+ + Y F+ +
Sbjct: 126 MDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPRRED 185
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP----------GNQPKQDTSNHYH----------- 97
A A+ MN + + ++ NWAS G + ++ +H
Sbjct: 186 AERAIEQMNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERFHGGFEKTYDEIF 245
Query: 98 ---------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 148
++VG + E + ++ AF FG I+ RI K +GYAFV F +K
Sbjct: 246 HQTSPDNTSVYVGQIGSLTEDE-IRRAFDRFGAINEVRI------FKLQGYAFVKFEQKE 298
Query: 149 EAENAITAMNGQWLGSRSIRTNW 171
A AI MN + + +R +W
Sbjct: 299 PAARAIVQMNNTEIMGQMVRCSW 321
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK+EAE+AIT
Sbjct: 460 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 519
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
AMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NCTVY GG
Sbjct: 520 AMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNCTVYVGGVN 572
Query: 216 K---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HNT+IN V
Sbjct: 573 SALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPV 632
Query: 273 KCFWGKES 280
KC WGKES
Sbjct: 633 KCSWGKES 640
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 67 NKRVFLEKEMKVNWASSPGNQPK-------------QDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ K Q + ++ ++VG ++ + +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 171 W 171
W
Sbjct: 636 W 636
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK+EAE+AIT
Sbjct: 460 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 519
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
AMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NCTVY GG
Sbjct: 520 AMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNCTVYVGGVN 572
Query: 216 K---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HNT+IN V
Sbjct: 573 SALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPV 632
Query: 273 KCFWGKES 280
KC WGKES
Sbjct: 633 KCSWGKES 640
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 67 NKRVFLEKEMKVNWASSPGNQPK-------------QDTSNHYHIFVGDLSPEIET---Q 110
N + + ++ NWA+ K Q + ++ ++VG ++ + +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 171 W 171
W
Sbjct: 636 W 636
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+HIFVGDLS EIETQ L+EAF PFGEIS+CR+VRDPQTLKSKGY FVSF+KK+EAE+AIT
Sbjct: 452 FHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAIT 511
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
AMNGQWLGSRSIRTNW+TRKPPA + K +TFDEVYNQSSP+NCTVY GG
Sbjct: 512 AMNGQWLGSRSIRTNWATRKPPA-------SKENIKPLTFDEVYNQSSPSNCTVYVGGVN 564
Query: 216 K---DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
L+EE++ K F+P+G I +IRVFK+KGYAFV+F+TKE ATHAI +HNT+IN V
Sbjct: 565 SALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPV 624
Query: 273 KCFWGKES 280
KC WGKES
Sbjct: 625 KCSWGKES 632
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + + L F+ G + C+V+R+P + Y F+ F+ + A +A+ AM
Sbjct: 454 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 513
Query: 67 NKRVFLEKEMKVNWASSPGNQPK-------------QDTSNHYHIFVGDLSP---EIETQ 110
N + + ++ NWA+ K Q + ++ ++VG ++ + +
Sbjct: 514 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 573
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ FAP+G I R+ +D KGYAFV F K A +AI ++ + ++ ++ +
Sbjct: 574 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 627
Query: 171 W 171
W
Sbjct: 628 W 628
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 165/216 (76%), Gaps = 4/216 (1%)
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+R + E+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R
Sbjct: 200 RRRAAPDSEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDAR 258
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q
Sbjct: 259 VVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQ 315
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+F
Sbjct: 316 ENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 375
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
V+F+T E+A HAI S++ T I GH VKC+WGKES +
Sbjct: 376 VRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 411
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + + F+ G + +V+++ + Y F+ F + A
Sbjct: 223 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 282
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGD 102
A+ M + ++++ NWA+ PK Q + + ++ G
Sbjct: 283 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 342
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++NG +
Sbjct: 343 IASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTI 396
Query: 163 GSRSIRTNWSTRKPPAMTN 181
++ W P N
Sbjct: 397 EGHVVKCYWGKESPDMTKN 415
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 186/290 (64%), Gaps = 21/290 (7%)
Query: 7 PTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATAL 63
P TL+VGNLD ++T+E L LF+QIG V K+I + NDP+AF+EF H A+ AL
Sbjct: 37 PRTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQAL 96
Query: 64 AAMNKRVFLEKEMKVNWA---SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
+MN R LE+EM+VNWA + PG++ K +TS H+H+FVGDLS EI++ L+EAF PFG
Sbjct: 97 QSMNGRQLLEREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFG 156
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
E+S +I+RD T K+KGY FVS+ ++ +AE AI MNGQWLG R+IRTNW+TRKP
Sbjct: 157 EVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEG 216
Query: 181 N--------------ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
R H T+DEV+ +++ N +VY G L E+ + +
Sbjct: 217 GERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADNTSVYVGNINS-LTEDEIRRG 275
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
F FG IV++R+FK +GYAFVKF KE+A AI ++N D++G V+C W
Sbjct: 276 FERFGQIVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCSW 325
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 180/293 (61%), Gaps = 18/293 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAA 65
P TL+V NLD ++T+E L LF+QIG V K+I E NDPYAF+EF H A AL +
Sbjct: 38 DPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQS 97
Query: 66 MNKRVFLEKEMKVNWASSPG----NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
N R LEKEM V WA P N+ K +TS H+H+FVGDL EI++ L+EAF FGE
Sbjct: 98 HNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGE 157
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+S +I+RD T K KGY FVS+ ++ +AE AI MNG WLG R+IRTNW+TRKP
Sbjct: 158 VSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGE 217
Query: 182 ERKRQNS------------HTKT-ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
+ H ++ T+DE++NQ++ N +VY G +L E+ + + F
Sbjct: 218 RGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIA-NLGEDEIRRAFD 276
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
FG I ++R FK +GYAFVKF TKE+A AI ++N DI G V+C WGK +
Sbjct: 277 RFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSGD 329
>gi|380023603|ref|XP_003695607.1| PREDICTED: nucleolin-like [Apis florea]
Length = 360
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 176/263 (66%), Gaps = 36/263 (13%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKKAEAE+AI AMNGQWLGSRSIRTNW+TRKPPA +E
Sbjct: 61 DCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSE- 119
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
++ K +TFDEVYNQSSPTNCTVYCGG L EEL+ K FSPFG+I +IRVFK+KG
Sbjct: 120 ----ANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKG 175
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQ 303
YAF++F+TKE+ATHAI ++HNTDING TVKC WGKES + + Q T Q S+A
Sbjct: 176 YAFIRFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQ-----TGQALSSA-T 229
Query: 304 FPYIYNQQM---------GYWYPQAAAYTATAAQL-------PQQFYQYGQL-GYPQG-Y 345
+PY GYWYP +Y TA Q+ Q Y YGQ GY Q Y
Sbjct: 230 YPYYAAAAAAAAAAAGVAGYWYP-PQSYPTTATQMQAGGFLQGMQGYTYGQFAGYQQAQY 288
Query: 346 VGM-----VGRQVPGW-QGIPGA 362
+GM GW QG+PG
Sbjct: 289 MGMGMGVHAAGTAAGWGQGLPGG 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 37 CKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK---- 89
C+V+R+P + Y F+ FV A +A+ AMN + + ++ NWA+ PK
Sbjct: 62 CRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEAN 121
Query: 90 -----------QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Q + + ++ G L+ + + +++ F+PFG I R+ +D KG
Sbjct: 122 AKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------KG 175
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
YAF+ F K A +AI A++ + ++++ +W
Sbjct: 176 YAFIRFSTKESATHAIVAVHNTDINGQTVKCSWG 209
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G L +TEEL+ FS G ++ +V ++ G YAF+ F A
Sbjct: 132 NQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKG---YAFIRFSTKESAT 188
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ A++ + +K +W G+
Sbjct: 189 HAIVAVHNTDINGQTVKCSWGKESGD 214
>gi|195055821|ref|XP_001994811.1| GH17442 [Drosophila grimshawi]
gi|193892574|gb|EDV91440.1| GH17442 [Drosophila grimshawi]
Length = 322
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 192/305 (62%), Gaps = 54/305 (17%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 21 DCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPA----- 75
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVF 239
+ + + K +TFDEVYNQSSPTNCTVYCGG LNEE++ K FSP+GTI +IRVF
Sbjct: 76 TKADINVKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 135
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES + + ++ + +
Sbjct: 136 KDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAIAG------QA 189
Query: 300 TAPQFPY------------IYNQQM-GYWYPQAAAYTATA---AQLPQQFYQ------YG 337
A FP+ Y QQ+ GYWYP A Y A A P QF Q YG
Sbjct: 190 LAQGFPFGSAAAAAAAAAAAYGQQVAGYWYPPAPTYPTAAPASALQPGQFLQGMQGFTYG 249
Query: 338 QL-GYPQG-YVGMVGRQVPG-WQGIPGAQP------------TAQQMAVAQAQPSMMAAY 382
Q GY Q Y+GM G Q+PG WQ +P QP Q + A Q + + AY
Sbjct: 250 QFAGYQQASYMGM-GVQLPGTWQSVP-PQPQLTSAAAAAAPQITQSVGGALPQTAGVVAY 307
Query: 383 AMQQF 387
MQQF
Sbjct: 308 PMQQF 312
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 34/184 (18%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
+Y+ ++ VT LL ++ + C+V+R+P + Y F+ FV + A TA+ AM
Sbjct: 1 MYIYAVNTYVTNSLLSVIY------RDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 54
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDLSPEI 107
N + + ++ NWA+ K D + F G LS +
Sbjct: 55 NGQWLGSRSIRTNWATRKPPATKADINVKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 114
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I R+ +D KGYAFV F K A +AI A+N + + +
Sbjct: 115 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 168
Query: 168 RTNW 171
+ W
Sbjct: 169 KCAW 172
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 24/125 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 92 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 148
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 149 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 194
Query: 117 APFGE 121
PFG
Sbjct: 195 -PFGS 198
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 193/328 (58%), Gaps = 33/328 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAAT 61
DE+ P TLYVGNLD V+E L+ LF IGP K CK+I +P G DPY F+EF H+ A
Sbjct: 21 DEAYPKTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHALA 80
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A AMN+R L KE++VNWA+ P N K+DTSNH+HIFVGDL+PE + LK F+ G
Sbjct: 81 AHGAMNQRKILGKEIRVNWATRPSN--KRDTSNHHHIFVGDLAPETTSDDLKTYFSRIGI 138
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI-------TAMNGQWLGSRSIRTNWSTR 174
+S+ R++RD QT KSKGY FVSFV +A++ + A++G R +R NW+ R
Sbjct: 139 VSDARVMRDLQTNKSKGYGFVSFVNYQDAQDIVEKKRIIPDALHG-----RQVRCNWAAR 193
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
K T R Q + F V NQSS TNCTVY GG L ++L+ + F+ FG I+
Sbjct: 194 KG-GQTGGRTFQ-----KLEFANVVNQSSNTNCTVYLGGCMSGLTDQLMRETFAGFGNIL 247
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE--SENNSTLAQPSAP 292
+IRVF +KGY+F++F A AI + H + + G+TVKC WGKE S NS +
Sbjct: 248 EIRVFPDKGYSFIRFDNHTDAAQAITNKHGSTLEGYTVKCSWGKEGTSLGNSNIT----- 302
Query: 293 TTPQPNSTAPQFPYIYNQQMGYWYPQAA 320
N+ + N QM W P A
Sbjct: 303 -----NNFTNGVGGMDNMQMNQWSPAGA 325
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 161/220 (73%), Gaps = 7/220 (3%)
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MNKRV L++EMKVNWA+ PG+Q K DTS H+H+F+GDLSPE++ + LK+AFAPFGE+S+
Sbjct: 1 MNKRVLLDREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDA 60
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD TLKSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP ++ +
Sbjct: 61 KVIRDSTTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSK 120
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYA 245
+++D+V+NQ+ P N +VY G + +N+E + F FG IV++R+FK +G+A
Sbjct: 121 -----PELSYDDVFNQTGPDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFA 175
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVKCFWGK--ESENN 283
FV+F K++A +AI ++ T+I G TVKC WG+ E NN
Sbjct: 176 FVRFDKKDSACNAIVKMNGTEIGGQTVKCSWGRTPEGHNN 215
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTV 58
D S+ +++G+L V + L F+ G V KVIR+ + Y F+ +
Sbjct: 25 VDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREE 84
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-----SPGNQPKQDTS----------NHYHIFVGDL 103
A A+ MN + + ++ NWA+ + G Q K + S ++ +++G++
Sbjct: 85 AERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNV 144
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ + + L+ AF FG I RI K++G+AFV F KK A NAI MNG +G
Sbjct: 145 NQSVNDEDLRAAFDKFGRIVEVRI------FKTQGFAFVRFDKKDSACNAIVKMNGTEIG 198
Query: 164 SRSIRTNWSTRKPPAMTNER 183
++++ +W R P N++
Sbjct: 199 GQTVKCSWG-RTPEGHNNQQ 217
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T++Y+GN++ SV +E L A F + G + ++ + G +AF+ F A A+ MN
Sbjct: 137 TSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQG---FAFVRFDKKDSACNAIVKMN 193
Query: 68 KRVFLEKEMKVNWASSP-GNQPKQDTSNHYHIFVG 101
+ +K +W +P G+ +Q+ + +Y+ G
Sbjct: 194 GTEIGGQTVKCSWGRTPEGHNNQQNAAANYNQMQG 228
>gi|195449401|ref|XP_002072058.1| GK22643 [Drosophila willistoni]
gi|194168143|gb|EDW83044.1| GK22643 [Drosophila willistoni]
Length = 365
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/303 (51%), Positives = 189/303 (62%), Gaps = 51/303 (16%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 1 DCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPAT---- 56
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVF 239
+ + + K +TFDEVYNQSSPTNCTVYCGG LNE+++ K FSP+GTI +IRVF
Sbjct: 57 -KADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVF 115
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES + P+ + +
Sbjct: 116 KDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAGQA 169
Query: 300 TAPQFPY-----------IYNQQM-GYWY---PQAAAYTATAAQLPQQFYQ------YGQ 338
A FP+ Y QQ+ GYWY P + P QF Q YGQ
Sbjct: 170 LAQGFPFGSAAAAAAAAAAYGQQVAGYWYPQAPTYPPAAPASTLQPGQFLQGMQGFTYGQ 229
Query: 339 L-GYPQ-GYVGMVGRQVPG-WQGIP----------GAQP-TAQQMAVAQAQPSMMAAYAM 384
GY Q GY+GM G Q+PG WQ +P G P Q + A Q + + AY M
Sbjct: 230 FAGYQQAGYMGM-GVQLPGTWQSVPQQAQLTSATAGTAPQITQSVGSALPQATGVVAYPM 288
Query: 385 QQF 387
QQF
Sbjct: 289 QQF 291
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 28/157 (17%)
Query: 37 CKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
C+V+R+P + Y F+ FV + A TA+ AMN + + ++ NWA+ K D +
Sbjct: 2 CRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMN 61
Query: 94 NHYHIFV-------------------GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTL 134
F G LS + L++ F+P+G I R+ +D
Sbjct: 62 AKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVFKD---- 117
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
KGYAFV F K A +AI A+N + + ++ W
Sbjct: 118 --KGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAW 152
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ E++L FS G ++ +V ++ G YAF+ F
Sbjct: 72 NQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 128
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 129 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 174
Query: 117 APFG 120
PFG
Sbjct: 175 -PFG 177
>gi|194907025|ref|XP_001981472.1| GG11590 [Drosophila erecta]
gi|190656110|gb|EDV53342.1| GG11590 [Drosophila erecta]
Length = 414
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 156/308 (50%), Positives = 190/308 (61%), Gaps = 52/308 (16%)
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 108 LARFGDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPA 167
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIV 234
+ + + K +TFDEVYNQSSPTNCTVYCGG LNEE++ K FSP+GTI
Sbjct: 168 -----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQ 222
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTT 294
+IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES + + ++ +
Sbjct: 223 EIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAIAG--- 279
Query: 295 PQPNSTAPQFPY----------IYNQQM-GYWY-------PQAAAYTATAAQLPQ--QFY 334
+ A FP+ Y QQ+ GYWY A A Q Q Q +
Sbjct: 280 ---GALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFLQGMQGF 336
Query: 335 QYGQL-GYPQ-GYVGMVGRQVPG-WQGIPGAQP------------TAQQMAVAQAQPSMM 379
YGQ GY Q GY+GM G Q+PG WQ +P QP Q + A Q + +
Sbjct: 337 TYGQFAGYQQAGYMGM-GVQLPGTWQSVP-PQPQLASAAAATAPQITQSVGSALPQAAGV 394
Query: 380 AAYAMQQF 387
AY MQQF
Sbjct: 395 VAYPMQQF 402
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 170/282 (60%), Gaps = 39/282 (13%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
+P TLYVGNLD +VTE+ + LF+QIG V KVI +
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---------------------- 80
Query: 65 AMNKRVFLEKEMKVNWASSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
EMKVNWA PG Q K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S
Sbjct: 81 ----------EMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 130
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP
Sbjct: 131 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD----- 185
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
+ + SH ++DE+YNQ+S N +VY G L E+ + + F+ FG I ++R+FK +G
Sbjct: 186 QEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQG 244
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
YAFVKF K+ A AI ++N D+ G V+C WGK + T
Sbjct: 245 YAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKTGDTGKT 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 97 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 156
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 157 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI 216
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++ FA FG I+ RI K +GYAFV F K A AI MN Q +G
Sbjct: 217 ASLTEDE-IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVG 269
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 270 GQLVRCSW 277
>gi|195110885|ref|XP_002000010.1| GI22767 [Drosophila mojavensis]
gi|193916604|gb|EDW15471.1| GI22767 [Drosophila mojavensis]
Length = 315
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 167/251 (66%), Gaps = 38/251 (15%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKK+EAE AI AMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 76 DCRVVRDPQTLKSKGYGFVSFVKKSEAETAINAMNGQWLGSRSIRTNWATRKPPA----- 130
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL----NEELVSKVFSPFGTIVDIRVF 239
+ + + K +TFDEVYNQSSPTNCTVYCGG L NEE++ K FSP+GTI +IRVF
Sbjct: 131 TKADINVKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 190
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES + + ++ + +
Sbjct: 191 KDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAIAG------QA 244
Query: 300 TAPQFPY-----------IYNQQM-GYWYPQAAAYTATA---AQLPQQFYQ------YGQ 338
A FP+ Y QQ+ GYWYP A Y A A P QF Q YGQ
Sbjct: 245 LAQGFPFGSAAAAAAAAAAYGQQVAGYWYPPAPTYPTAAPASALQPGQFLQGMQGFTYGQ 304
Query: 339 L-GYPQG-YVG 347
GY Q Y+G
Sbjct: 305 FAGYQQASYMG 315
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 37 CKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
C+V+R+P + Y F+ FV + A TA+ AMN + + ++ NWA+ K D +
Sbjct: 77 CRVVRDPQTLKSKGYGFVSFVKKSEAETAINAMNGQWLGSRSIRTNWATRKPPATKADIN 136
Query: 94 NHYHIFV-------------------GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTL 134
F G LS + + L++ F+P+G I R+ +D
Sbjct: 137 VKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD---- 192
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
KGYAFV F K A +AI A+N + + ++ W
Sbjct: 193 --KGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAW 227
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 147 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 203
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 204 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 249
Query: 117 APFG 120
PFG
Sbjct: 250 -PFG 252
>gi|350589206|ref|XP_003482814.1| PREDICTED: nucleolysin TIAR-like [Sus scrofa]
Length = 320
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 163/236 (69%), Gaps = 12/236 (5%)
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ MN R L KE++VNWA++P +Q K+DTSNH+H+FVGDLSPEI + +K AF FG+I
Sbjct: 1 MCYMNGRKILGKEVRVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITAEDIKSAFTSFGKI 59
Query: 123 S---NCRIVRDPQTLKSKGYAFVSFV-KKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
S + R+V+D T KSKGY VSF K +AENAI M GQWLG R I+T+W+TRKPPA
Sbjct: 60 SIAMDARVVKDMATGKSKGYGSVSFFYNKLDAENAIVRMGGQWLGGRQIKTSWATRKPPA 119
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ Q ++TK + F++V NQSS NCTVYCGG L ++L+ + FSPFG I++IRV
Sbjct: 120 ---PKSTQENNTKQLKFEDVVNQSSSKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV 176
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES----ENNSTLAQPS 290
F EK Y+FV+F+T +A HAI S+ T I G VKC+WGKES EN S Q S
Sbjct: 177 FPEKRYSFVRFSTHGSAAHAIVSVTGTTIEGRVVKCYWGKESPDMTENYSRWGQWS 232
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVK---GCKVIREPG---NDPYAFLEFVHH 56
D S ++VG+L +T E + + F+ G + +V+++ + Y + F ++
Sbjct: 28 DTSNHFHVFVGDLSPEITAEDIKSAFTSFGKISIAMDARVVKDMATGKSKGYGSVSFFYN 87
Query: 57 TV-AATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHI 98
+ A A+ M + +++K +WA+ PK Q +S + +
Sbjct: 88 KLDAENAIVRMGGQWLGGRQIKTSWATRKPPAPKSTQENNTKQLKFEDVVNQSSSKNCTV 147
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
+ G ++ + Q +++ F+PFG+I R+ K Y+FV F A +AI ++
Sbjct: 148 YCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKRYSFVRFSTHGSAAHAIVSVT 201
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKR 185
G + R ++ W ++ P MT R
Sbjct: 202 GTTIEGRVVKCYWG-KESPDMTENYSR 227
>gi|194746390|ref|XP_001955663.1| GF18877 [Drosophila ananassae]
gi|190628700|gb|EDV44224.1| GF18877 [Drosophila ananassae]
Length = 240
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 164/251 (65%), Gaps = 38/251 (15%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 1 DCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPAT---- 56
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVF 239
+ + + K +TFDEVYNQSSPTNCTVYCGG LNEE++ K FSP+GTI +IRVF
Sbjct: 57 -KADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 115
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES P+ + +
Sbjct: 116 KDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKES------GDPNHMSAIAGQA 169
Query: 300 TAPQFPY-----------IYNQQM-GYWY-------PQAAAYTATAAQLPQ--QFYQYGQ 338
A FP+ Y QQ+ GYWY A A Q Q Q + YGQ
Sbjct: 170 LAQGFPFGSAAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFLQSMQGFTYGQ 229
Query: 339 L-GYPQ-GYVG 347
GY Q GY+G
Sbjct: 230 FAGYQQAGYMG 240
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 37 CKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
C+V+R+P + Y F+ FV + A TA+ AMN + + ++ NWA+ K D +
Sbjct: 2 CRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMN 61
Query: 94 NHYHIFV-------------------GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTL 134
F G LS + + L++ F+P+G I R+ +D
Sbjct: 62 AKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD---- 117
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
KGYAFV F K A +AI A+N + + ++ W
Sbjct: 118 --KGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAW 152
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 72 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 128
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 129 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 174
Query: 117 APFG 120
PFG
Sbjct: 175 -PFG 177
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 151/221 (68%), Gaps = 7/221 (3%)
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MNKR+ L++EMKVNWA PG Q K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S+
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RD T KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP +
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD-----Q 115
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGY 244
+ SH ++DE+YNQ+S N +VY G L E+ + + F+ FG I ++R+FK +GY
Sbjct: 116 EKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGY 174
Query: 245 AFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
AFVKF K+ A AI ++N D+ G V+C WGK + T
Sbjct: 175 AFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKTGDTGKT 215
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 26 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 85
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 86 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI 145
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++ FA FG I+ RI K +GYAFV F K A AI MN Q +G
Sbjct: 146 ASLTEDE-IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVG 198
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 199 GQLVRCSW 206
>gi|195353016|ref|XP_002043006.1| GM16372 [Drosophila sechellia]
gi|194127071|gb|EDW49114.1| GM16372 [Drosophila sechellia]
Length = 246
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/258 (54%), Positives = 167/258 (64%), Gaps = 38/258 (14%)
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F PF +CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRK
Sbjct: 1 FPPF-FCRDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRK 59
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFG 231
PPA + + + K +TFDEVYNQSSPTNCTVYCGG LNEE++ K FSP+G
Sbjct: 60 PPAT-----KADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYG 114
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
TI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES P+
Sbjct: 115 TIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKES------GDPNH 168
Query: 292 PTTPQPNSTAPQFPY----------IYNQQM-GYWY-------PQAAAYTATAAQLPQ-- 331
+ + A FP+ Y QQ+ GYWY A A Q Q
Sbjct: 169 MSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFLQGM 228
Query: 332 QFYQYGQL-GYPQ-GYVG 347
Q + YGQ GY Q GY+G
Sbjct: 229 QGFTYGQFAGYQQAGYMG 246
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 28/160 (17%)
Query: 35 KGCKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQD 91
+ C+V+R+P + Y F+ FV + A TA+ AMN + + ++ NWA+ K D
Sbjct: 7 RDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKAD 66
Query: 92 TSNHYHIFV-------------------GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQ 132
+ F G LS + + L++ F+P+G I R+ +D
Sbjct: 67 MNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD-- 124
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
KGYAFV F K A +AI A+N + + ++ W
Sbjct: 125 ----KGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWG 160
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 79 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 135
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGN 86
A A+ A+N ++ +K W G+
Sbjct: 136 EAATHAIVAVNNTEINQQPVKCAWGKESGD 165
>gi|195143935|ref|XP_002012952.1| GL23650 [Drosophila persimilis]
gi|194101895|gb|EDW23938.1| GL23650 [Drosophila persimilis]
Length = 320
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 158/233 (67%), Gaps = 32/233 (13%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+CR+VRDPQTLKSKGY FVSFVKK+EAE AITAMNGQWLGSRSIRTNW+TRKPPA
Sbjct: 76 DCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPAT---- 131
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVF 239
+ + + K +TFDEVYNQSSPTNCTVYCGG LNE+++ K FSP+GTI +IRVF
Sbjct: 132 -KADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVF 190
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K+KGYAFV+F+TKE ATHAI +++NT+IN VKC WGKES P+ + +
Sbjct: 191 KDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKES------GDPNHMSAIAGQA 244
Query: 300 TAPQFPY-----------IYNQQM-GYWYPQAAAY-TATAAQLPQQFYQYGQL 339
A FP+ Y +Q+ GYW P A Y TAT Q+ GQL
Sbjct: 245 LAQGFPFGSAAPAAAAAAAYGRQVAGYWNPPAPTYLTATTTSALQR----GQL 293
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATA 62
QP ++ N + +L C S+ + C+V+R+P + Y F+ FV + A TA
Sbjct: 53 QPNNIHSYNNNC----QLQCQFLSR---ERDCRVVRDPQTLKSKGYGFVSFVKKSEAETA 105
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFV-------------------GDL 103
+ AMN + + ++ NWA+ K D + F G L
Sbjct: 106 ITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGAL 165
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
S + L++ F+P+G I R+ +D KGYAFV F K A +AI A+N +
Sbjct: 166 SGFLNEDILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEIN 219
Query: 164 SRSIRTNW 171
+ ++ W
Sbjct: 220 QQPVKCAW 227
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ E++L FS G ++ +V ++ G YAF+ F
Sbjct: 147 NQSSPTNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 203
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A A+ A+N ++ +K W G+ NH G Q L + F
Sbjct: 204 EAATHAIVAVNNTEINQQPVKCAWGKESGD------PNHMSAIAG--------QALAQGF 249
Query: 117 APFG 120
PFG
Sbjct: 250 -PFG 252
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/245 (51%), Positives = 159/245 (64%), Gaps = 32/245 (13%)
Query: 36 GCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
G V++ NDPY F+EF H AA ALAAMN R L KE+KVNWA++P +Q K+DTS+
Sbjct: 16 GFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSS- 73
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+ R+V+D T KSKGY FVSF K +AENAI
Sbjct: 74 ---------------------------KDARVVKDMATGKSKGYGFVSFYNKLDAENAIV 106
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
M GQWLG R IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG
Sbjct: 107 HMGGQWLGGRQIRTNWATRKPPA---PKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIA 163
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+
Sbjct: 164 SGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 223
Query: 276 WGKES 280
WGKES
Sbjct: 224 WGKES 228
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------- 97
Y F+ F + A A+ M + ++++ NWA+ PK N+
Sbjct: 90 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 149
Query: 98 -------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 150 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 203
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 204 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 234
>gi|270015092|gb|EFA11540.1| hypothetical protein TcasGA2_TC016061 [Tribolium castaneum]
Length = 309
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/244 (55%), Positives = 168/244 (68%), Gaps = 28/244 (11%)
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
MNGQWLGSRSIRTNW+TRKPPA +E +++K ++FDE+YNQSS TNCTVYCGG
Sbjct: 1 MNGQWLGSRSIRTNWATRKPPAPKSE-----ANSKPMSFDEIYNQSSATNCTVYCGGITN 55
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
L E+L+ K F P+G I +IRVFKEKGYAF++F+TKE+ATHAI +HN++I G TVKC W
Sbjct: 56 GLCEDLLQKTFLPYGIIQEIRVFKEKGYAFIRFSTKESATHAIVGVHNSEIGGQTVKCSW 115
Query: 277 GKESENNSTLAQPSAPTTPQPNSTAPQFPY-IYNQQMGYWYPQAAAYTATAAQLPQQF-- 333
GKES + + +AP Q T+ Q+PY Y QQ+GYWYPQ+ TA AAQ+ QF
Sbjct: 116 GKESGDPN-----NAPAASQ-ALTSTQYPYGAYGQQLGYWYPQSFP-TAAAAQMQGQFLQ 168
Query: 334 ----YQYGQL-GYPQGYVGMVGRQVPG-WQGIPG-AQPTAQQMAVAQA---QPSMMAAYA 383
Y YGQ GY Q Y+GM G QVP WQGIPG Q AQQMA A QP ++ +
Sbjct: 169 GMQGYTYGQFAGYQQSYMGM-GMQVPATWQGIPGQPQLPAQQMAAPSAALQQPGLV--FP 225
Query: 384 MQQF 387
+QQ+
Sbjct: 226 IQQY 229
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 66 MNKRVFLEKEMKVNWASSPGNQPK---------------QDTSNHYHIFVGDLSPEIETQ 110
MN + + ++ NWA+ PK Q ++ + ++ G ++ +
Sbjct: 1 MNGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYNQSSATNCTVYCGGITNGLCED 60
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ F P+G I R+ K KGYAF+ F K A +AI ++ +G ++++ +
Sbjct: 61 LLQKTFLPYGIIQEIRV------FKEKGYAFIRFSTKESATHAIVGVHNSEIGGQTVKCS 114
Query: 171 W 171
W
Sbjct: 115 W 115
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 168/293 (57%), Gaps = 32/293 (10%)
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
EI T+ +K AFAPFG+IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R
Sbjct: 1 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 60
Query: 166 SIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
IRTNW+TRKPPA + Q ++TK + F++V NQSSP NCTVYCGG L ++L+ +
Sbjct: 61 QIRTNWATRKPPA---PKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ 117
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FSPFG I++IRVF EKGY+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 118 TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES----- 172
Query: 286 LAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQL 339
P+ T F + Q G W Q Y A Q+P YG
Sbjct: 173 -----------PDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP----PYGVY 216
Query: 340 GYPQGYVGMVGRQVP--GWQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
G P G Q P W G GAQP Q P A Y M FPTQ
Sbjct: 217 GQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ 269
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVFLEKE 75
+T E + + F+ G + +V+++ + Y F+ F + A A+ M + ++
Sbjct: 2 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 61
Query: 76 MKVNWASSPGNQPK-----------------QDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
++ NWA+ PK Q + + ++ G ++ + Q +++ F+P
Sbjct: 62 IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 121
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG+I R+ KGY+FV F A +AI ++NG + ++ W P
Sbjct: 122 FGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDM 175
Query: 179 MTN 181
N
Sbjct: 176 TKN 178
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 18/306 (5%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DT+ HYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 79 LNGRKIFDTEIRVNWAYQ-GQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDA 137
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 138 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASP 197
Query: 176 --PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
P A N +++D V Q+ N TVY G + + +F G +
Sbjct: 198 PRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYL 257
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
+IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + +T AQP P
Sbjct: 258 SEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTT-AQPGGPL 316
Query: 294 TPQPNS 299
+P P S
Sbjct: 317 SPTPAS 322
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 76
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN T + V+ G
Sbjct: 77 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTTGHYH------------VFVGDL 115
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E++ K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 116 SPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 175
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
++ W N T + + P+P +T
Sbjct: 176 SRAIRVNW----ANQKTQGSVAVASPPRPGATG 204
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 178/322 (55%), Gaps = 25/322 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DT+ HYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 73 LNGRKIFDTEIRVNWAYQ-GQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDA 131
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPAMTN 181
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K PP T
Sbjct: 132 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTA 191
Query: 182 ERKRQNSHTKT-------------ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
R T ++++ V Q+ N TVY G + + +F
Sbjct: 192 SSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQ 251
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + T AQ
Sbjct: 252 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGGT-AQ 310
Query: 289 PSAPTTPQPNSTAPQFPYIYNQ 310
P P +PQP PQ P Y Q
Sbjct: 311 PGGP-SPQPMYGIPQ-PTSYGQ 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 12 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 70
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN T + V+ G
Sbjct: 71 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTTGHYH------------VFVGDL 109
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E+++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 110 SPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 169
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQP 297
++ W N T P T P
Sbjct: 170 SRAIRVNW----ANQKTQGAPPTTTASSP 194
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 142/211 (67%), Gaps = 7/211 (3%)
Query: 76 MKVNWASSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTL 134
MKVNWA PG Q K DT+ H+H+FVGDLS E++ Q L+EAF PFG++S+ +++RD T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT 194
KSKGY FVS+ K+ EAE AI MNGQWLG R+IRTNW+TRKP + + SH +
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD-----QEKPSHYNEKS 115
Query: 195 FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKET 254
+DE+YNQ+S N +VY G L E+ + + F+ FG I ++R+FK +GYAFVKF K+
Sbjct: 116 YDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDA 174
Query: 255 ATHAIESIHNTDINGHTVKCFWGKESENNST 285
A AI ++N D+ G V+C WGK + T
Sbjct: 175 AAKAIVQMNNQDVGGQLVRCSWGKTGDTGKT 205
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D ++ ++VG+L V + L F G V KVIR+ + Y F+ +
Sbjct: 16 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 75
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPK--------------QDTSNHYHIFVGDL 103
A A+ MN + + ++ NWA+ PG+Q K Q + ++ ++VG++
Sbjct: 76 AERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI 135
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E + +++ FA FG I+ RI K +GYAFV F K A AI MN Q +G
Sbjct: 136 ASLTEDE-IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVG 188
Query: 164 SRSIRTNW 171
+ +R +W
Sbjct: 189 GQLVRCSW 196
>gi|241161338|ref|XP_002408889.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215494429|gb|EEC04070.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 322
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 188/329 (57%), Gaps = 23/329 (6%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS--NCRIVR 129
L +EMKVNWA+SPGN PK DTS HYHIFVGDLSPEIET L++AFAPFGEIS R V
Sbjct: 7 LFQEMKVNWATSPGNTPKLDTSKHYHIFVGDLSPEIETTQLRDAFAPFGEISIMTLRGVP 66
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
+ LK + + + + + + L + S+ +TR P ++
Sbjct: 67 NNTDLKEARFYYRWMLGICQGRAPSGSGFSRTLAACSLSIRAATRPPTSLITGLPLALLG 126
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGK----DLNEELVSKVFSPFGTIVDIRVFKEKGYA 245
+ + + V ++ C F + L EEL+ K F+ +G I +IRVFK+KGYA
Sbjct: 127 SAN-SAEFVPGGATALGMNFDCCCFFELSRFVLAEELMQKTFNTYGAIQEIRVFKDKGYA 185
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFP 305
FV+F TKE ATHAI + HN+D+NG TVKC WGKE+ + + QP + A Q+
Sbjct: 186 FVRFATKEAATHAIVATHNSDVNGQTVKCSWGKEAGDPN--------NQQQPQNLATQYS 237
Query: 306 YIYNQQMGYWYPQAAA-YTATAAQLPQQF-YQYGQLGYPQGYVGMVGRQVPGWQGIPGAQ 363
Y Y QQMGYWYPQAAA Y Q Q Y Y Q Y QG+ G VG Q+ WQG+PG
Sbjct: 238 YPY-QQMGYWYPQAAAGYPQVQGQFMQGVQYPYSQY-YGQGFGG-VGMQM-AWQGLPGQP 293
Query: 364 PTAQQMAVAQA--QPSMMAAYAMQQFPTQ 390
P A Q A+AQ QP M+ AY MQQ+ Q
Sbjct: 294 PVAAQTAMAQGLQQPGMIGAYPMQQYQAQ 322
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 145/229 (63%), Gaps = 11/229 (4%)
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
LAA+ K E+K NWA PK DTS H+H+FVGDL+ EI+ LK AFA +GEI
Sbjct: 106 LAAIQKAA----ELKANWAMQ-NQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAAYGEI 160
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S +++RDPQT+KSKGY FVSF K AE AI MNGQ +G R IRTNW++RKP +
Sbjct: 161 SEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWASRKPASA--- 217
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ +HTK TFDEV+N + N +VY G EE + + F+ G I ++R+FK++
Sbjct: 218 ---EEAHTKEQTFDEVFNATRADNTSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQ 274
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
GYAFV++ TKE AT AI ++ +ING +KC WG+ +N + +A
Sbjct: 275 GYAFVRYATKEAATRAIMQMNGKEINGQNIKCSWGRTPNDNCLMTNQAA 323
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTV 58
D S+ ++VG+L + L A F+ G + KVIR+P + Y F+ F
Sbjct: 128 VDTSKHFHVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKES 187
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-SPGNQPKQDT-------------SNHYHIFVGDLS 104
A A+A MN ++ ++++ NWAS P + + T +++ ++VG++
Sbjct: 188 AEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGNVH 247
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ L+EAFA G IS RI K +GYAFV + K A AI MNG+ +
Sbjct: 248 SSTTEEDLREAFASIGAISEVRI------FKQQGYAFVRYATKEAATRAIMQMNGKEING 301
Query: 165 RSIRTNW 171
++I+ +W
Sbjct: 302 QNIKCSW 308
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T++YVGN+ S TEE L F+ IG + ++ ++ G YAF+ + A A+ MN
Sbjct: 239 TSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQG---YAFVRYATKEAATRAIMQMN 295
Query: 68 KRVFLEKEMKVNWASSPGN 86
+ + +K +W +P +
Sbjct: 296 GKEINGQNIKCSWGRTPND 314
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 186/345 (53%), Gaps = 27/345 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G+ K+DTS H+H+FVGDLSPE+ L +AF+ FG +S+
Sbjct: 75 LNGRKIFDTEIRVNWAYQ-GSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDA 133
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--------PP 177
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K P
Sbjct: 134 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPT 193
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
N ++++ V Q+ N TVY G + + +F G + +IR
Sbjct: 194 GAGGAPAPINFQGGPLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIR 253
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQP 297
+ ++G+AFVK T E A AI + ++G +KC WGK+ + T+ QP+A +P P
Sbjct: 254 MQADRGFAFVKLDTHENAAMAIVQLQGQMVHGRPIKCSWGKDRADGGTV-QPAAAISPNP 312
Query: 298 NSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYP 342
+ AP + + Q Y PQA Y QYG GYP
Sbjct: 313 -AAAP-YGNVDMQSAPYGMPQANTYG-----------QYGFPGYP 344
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 14 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 72
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ Q S K T + V+ G
Sbjct: 73 QTLNGRKIFDTEIRVNWA------------YQGSTAKEDTSGHFH---------VFVGDL 111
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+ +++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 112 SPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 171
Query: 269 GHTVKCFWGKESENNSTLAQPSA 291
++ W + + +P+
Sbjct: 172 SRAIRVNWANQKTQGAPAPRPTG 194
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 18/306 (5%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DT+ HYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 76 LNGRKIFDTEIRVNWAYQ-GQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDA 134
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 135 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASP 194
Query: 176 --PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
P A N +++D V Q+ N TVY G + + +F G +
Sbjct: 195 PRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYL 254
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
+IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + +T AQP P
Sbjct: 255 SEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTT-AQPGGPL 313
Query: 294 TPQPNS 299
+P P S
Sbjct: 314 SPTPAS 319
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 73
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN T + V+ G
Sbjct: 74 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTTGHYH------------VFVGDL 112
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E++ K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 113 SPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 172
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
++ W N T + + P+P +T
Sbjct: 173 SRAIRVNW----ANQKTQGSVAVASPPRPGATG 201
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 190/356 (53%), Gaps = 24/356 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVA 59
E + LYVGNL VTE +L +FS GPV+G K+I + G Y F+E+ A
Sbjct: 105 EGKRAHLYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSA 164
Query: 60 ATALAAMNKRVFLEKEMKVNWA-SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
TAL + R + E++VNWA + + K+D S HYH+FVGDLSPE+ + L +AFA
Sbjct: 165 ETALQTLGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAA 224
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--- 175
FG +S+ R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 225 FGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQG 284
Query: 176 ---------PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
P M + + ++ V Q+ N TVY G + + +
Sbjct: 285 MAATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQADLIPL 344
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG IV+IR+ ++G+AFVK T E A AI ++ T ++G +KC WGK+ +
Sbjct: 345 FQGFGYIVEIRMQADRGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKDRASADPN 404
Query: 287 AQPSAPTTPQPNSTAPQFPYIYNQ-QMGYWYPQAAAYTATAAQLPQQFYQYGQLGY 341
+ P++ P + P +Y Q G YPQ + Y AA PQ YGQ GY
Sbjct: 405 SAPASGMPMAPVAGMYGMPQMYGMPQAG--YPQYSGYPQYAAG-PQ---GYGQPGY 454
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 194/374 (51%), Gaps = 48/374 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTS HYH+FVGDLSPE+ L +AF+ FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPAMTN 181
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K PA+
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQ 196
Query: 182 ERKRQNS----------HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+ S ++++ V Q+ N TVY G + + +F G
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIG 256
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
+ +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + + AQP+A
Sbjct: 257 YLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTAAAQPAA 316
Query: 292 ---PTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGM 348
TT P ++ P Y PQ P + QYG YP G+ G
Sbjct: 317 MSPTTTATPYASMPM----------YGMPQ-----------PNTYGQYGFGAYP-GFPG- 353
Query: 349 VGRQVPGWQGIPGA 362
Q G G PGA
Sbjct: 354 ---QAAGQPGAPGA 364
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRSAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + + V+ G
Sbjct: 76 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSGHYH------------VFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+++++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
++ W + P+ +P+P + P N Q G
Sbjct: 175 SRAIRVNWANQKTQGGA---PAVQQSPRPAGSTGGAPAPINFQGG 216
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 194/374 (51%), Gaps = 48/374 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTS HYH+FVGDLSPE+ L +AF+ FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPAMTN 181
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K PA+
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQ 196
Query: 182 ERKRQNS----------HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+ S ++++ V Q+ N TVY G + + +F G
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIG 256
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
+ +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + + AQP+A
Sbjct: 257 YLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTAAAQPAA 316
Query: 292 ---PTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGM 348
TT P ++ P Y PQ P + QYG YP G+ G
Sbjct: 317 MSPTTTATPYASMPM----------YGMPQ-----------PNTYGQYGFGAYP-GFPG- 353
Query: 349 VGRQVPGWQGIPGA 362
Q G G PGA
Sbjct: 354 ---QAAGQPGAPGA 364
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRSAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + + V+ G
Sbjct: 76 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSGHYH------------VFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+++++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
++ W + P+ +P+P + P N Q G
Sbjct: 175 SRAIRVNWANQKTQGGA---PAVQQSPRPAGSTGGAPAPINFQGG 216
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 170/289 (58%), Gaps = 9/289 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVA 59
E + LYVGNL VTE +L +F+ G V+ K+I + G Y F+E+ A
Sbjct: 11 EHRRAHLYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAA 70
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
TAL +N R + E++VNWA GN ++DT+NH+H+FVGDLSPE+ + L +AF+ F
Sbjct: 71 ETALQTLNGRKIFDTEIRVNWAYQ-GNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGF 129
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA- 178
IS+ R++ D T KS+GY F+SF +K +AE AI+ MNG+WLGSR+IR NW+ +K
Sbjct: 130 KSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWANQKTQTG 189
Query: 179 ---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
+ + N+ ++++ V+ Q+ N TVY G + + +F FG I++
Sbjct: 190 SHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIE 249
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
+R+ ++G+AFVK + E A+ AI + T I G +KC WG++ N+
Sbjct: 250 VRMQADRGFAFVKLDSHENASMAIVQLQGTLIQGRPIKCSWGRDRTANA 298
>gi|318087014|gb|ADV40099.1| TIA-1-like protein [Latrodectus hesperus]
Length = 166
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 113/139 (81%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
+ES P TLYVGNLD +VTEEL+ ALF QIGPVKG K+I+EPGNDPY F+EF H AA A
Sbjct: 25 NESHPKTLYVGNLDPTVTEELILALFGQIGPVKGYKIIQEPGNDPYCFVEFTDHQSAAAA 84
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L AMN R L KEMKVNWA+SP N PKQDTS HYHIFVGDLSPEIET L+EAFAPFGEI
Sbjct: 85 LLAMNHRNCLGKEMKVNWATSPSNTPKQDTSKHYHIFVGDLSPEIETAQLREAFAPFGEI 144
Query: 123 SNCRIVRDPQTLKSKGYAF 141
S+CR+VRDPQTLKSK
Sbjct: 145 SDCRVVRDPQTLKSKAMGL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 78 VNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSK 137
+ + S+ N+ + + S+ ++VG+L P + + + F G + +I+++P +
Sbjct: 12 IKYDSAMSNKEQSNESHPKTLYVGNLDPTVTEELILALFGQIGPVKGYKIIQEP---GND 68
Query: 138 GYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDE 197
Y FV F A A+ AMN + + ++ NW+T P+ T +
Sbjct: 69 PYCFVEFTDHQSAAAALLAMNHRNCLGKEMKVNWATS--PSNTPK--------------- 111
Query: 198 VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
Q + + ++ G ++ + + F+PFG I D RV ++
Sbjct: 112 ---QDTSKHYHIFVGDLSPEIETAQLREAFAPFGEISDCRVVRD 152
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
AM+N+ + SH KT+ Y G + EEL+ +F G + +
Sbjct: 17 AMSNKEQSNESHPKTL----------------YVGNLDPTVTEELILALFGQIGPVKGYK 60
Query: 238 VFKEKG---YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ +E G Y FV+FT ++A A+ ++++ + G +K W N
Sbjct: 61 IIQEPGNDPYCFVEFTDHQSAAAALLAMNHRNCLGKEMKVNWATSPSN 108
>gi|157120611|ref|XP_001659686.1| ribonucleoprotein [Aedes aegypti]
gi|108874872|gb|EAT39097.1| AAEL009072-PA [Aedes aegypti]
Length = 294
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/266 (53%), Positives = 170/266 (63%), Gaps = 38/266 (14%)
Query: 149 EAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCT 208
EAENAI AMNGQWLGSRSIRTNW+TRKPPA E + K +TFDEVYNQSSPTNCT
Sbjct: 26 EAENAIAAMNGQWLGSRSIRTNWATRKPPATKAEL-----NAKPLTFDEVYNQSSPTNCT 80
Query: 209 VYCGGFGKD----LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHN 264
VYCGG G L+EE++ K FSPFGTI +IRVFK+KGYAFV+F+TKE ATHAI ++HN
Sbjct: 81 VYCGGVGGTLAGGLSEEILQKTFSPFGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVHN 140
Query: 265 TDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY--IYNQQM-GYW----YP 317
++IN TVKC WGKES + + +AP+ + FP+ Y QQ+ GYW
Sbjct: 141 SEINAQTVKCSWGKESGDPN-----NAPSLASQALSQAGFPFNTAYGQQVAGYWYPPAPT 195
Query: 318 QAAAYTATAAQLPQQF------YQYGQL-GYPQGYVGMVGRQVPG-WQGIPG-AQ--PTA 366
AA L QF Y YGQ GY QGY+GM G Q+PG W G+P AQ TA
Sbjct: 196 YPTTPAPAAAPLQSQFLQGMQGYTYGQFAGYQQGYMGM-GMQLPGAWPGVPTQAQIPATA 254
Query: 367 QQMAVAQA-----QPSMMAAYAMQQF 387
QQ+A A Q + + AY MQQF
Sbjct: 255 QQLAQAGVGGALPQAAGVVAYPMQQF 280
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 25/132 (18%)
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIF---VGDLSP---------- 105
A A+AAMN + + ++ NWA+ K + + F SP
Sbjct: 27 AENAIAAMNGQWLGSRSIRTNWATRKPPATKAELNAKPLTFDEVYNQSSPTNCTVYCGGV 86
Query: 106 ------EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
+ + L++ F+PFG I R+ +D KGYAFV F K A +AI A++
Sbjct: 87 GGTLAGGLSEEILQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHN 140
Query: 160 QWLGSRSIRTNW 171
+ +++++ +W
Sbjct: 141 SEINAQTVKCSW 152
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 138/187 (73%), Gaps = 5/187 (2%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNKR 69
YVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H AA ALAAMN R
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 60
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+
Sbjct: 61 KILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 119
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q ++
Sbjct: 120 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQENN 176
Query: 190 TKTITFD 196
TK + F+
Sbjct: 177 TKQLRFE 183
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
+VG+LS ++ + + F+ G +C+++ + + + Y FV F + +A A+ AMN
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMN 58
Query: 159 GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
G+ + + ++ NW+T ++++K ++H V+ G ++
Sbjct: 59 GRKILGKEVKVNWAT----TPSSQKKDTSNHFH-----------------VFVGDLSPEI 97
Query: 219 NEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E + F+PFG I D RV K+ KGY FV F K A +AI + + G +
Sbjct: 98 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 157
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPNST 300
+ W +P AP + Q N+T
Sbjct: 158 RTNWATR--------KPPAPKSTQENNT 177
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 185/349 (53%), Gaps = 37/349 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTSNHYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGPSPTMP 196
Query: 176 --PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
P M N ++++ V Q+ N TVY G + + +F G +
Sbjct: 197 GRPSGMGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL 256
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE-SENNSTLAQPSAP 292
+IR+ ++G+AFVK T E A AI + ++G +KC WGK+ ++ + L+ S
Sbjct: 257 SEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTAPLSTGSMS 316
Query: 293 TTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGY 341
TP + AP Y Q Y PQ P + QYG GY
Sbjct: 317 PTP---AAAP-----YGQLPMYGMPQ-----------PNTYGQYGFGGY 346
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ Q K T + + V+ G
Sbjct: 76 QTLNGRKIFDTEIRVNWA------------YQGQQNKEDTSNHYH---------VFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E++ K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAP 302
++ W + P+ P P AP
Sbjct: 175 SRAIRVNWANQKTQGGP--SPTMPGRPSGMGGAP 206
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 164/291 (56%), Gaps = 16/291 (5%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI----REPGNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTS HYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGA 196
Query: 186 Q-----------NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
+ N +T+++V Q++P N TVY G + + +F G +
Sbjct: 197 RPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQSIGYLS 256
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
+IR+ ++G+AFVK T E A AI + ++G +KC WGK+ +
Sbjct: 257 EIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWGKDRADGGV 307
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + + + V+ G
Sbjct: 76 QTLNGRKIFDTEIRVNWAY---------QGQQNK------------EDTSGHYHVFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E++ K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 175 SRAIRVNWANQ 185
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 165/299 (55%), Gaps = 22/299 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI----REPGNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA GNQ K+DTSNHYH+FVGDLSPE+ + L++AF+ FG +S+
Sbjct: 79 LNGRKIFDTEIRVNWAYQ-GNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDA 137
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 138 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAMGGGAP 197
Query: 186 -----------------QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
N I+++ V +Q+ N TVY G + + +F
Sbjct: 198 APAAARPSPGLGGSPAPMNFQGGPISYESVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQ 257
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + +
Sbjct: 258 SIGYLQEIRMQADRGFAFVKLDTHEHAAMAIIQLQGQMVHGRPIKCSWGKDRADGGAVG 316
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYIDMRAAETAL 76
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + N+ K S+ + V+ G
Sbjct: 77 QTLNGRKIFDTEIRVNWAYQG-----NQNKEDTSN----------------HYHVFVGDL 115
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E++ K FS FG++ D RV K +GY F+ F K A AI +++ +
Sbjct: 116 SPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 175
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 176 SRAIRVNWANQ 186
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 188/381 (49%), Gaps = 58/381 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTSNHYH+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA------- 178
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSPGGPGG 196
Query: 179 -----------MTNERKRQNSHTKT------------ITFDEVYNQSSPTNCTVYCGGFG 215
R NS ++++ V Q+ N TVY G
Sbjct: 197 PGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVGNLV 256
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
+ + +F G + +IR+ ++G+AFVK T E A AI + ++G +KC
Sbjct: 257 PYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCS 316
Query: 276 WGKESENNSTLAQPSAPTTPQPNSTAP-QFPYIYNQQMGYWYPQAAAYTATAAQLPQQFY 334
WGK+ + AP +P S AP PY Q Y PQ +
Sbjct: 317 WGKDRAD-------GAPISPGSMSPAPVAAPYNVVPQPMYGMPQPNS------------- 356
Query: 335 QYGQLGYPQGYVGMVGRQVPG 355
YGQ GY GY G G PG
Sbjct: 357 -YGQYGY-AGYAGSPGGAAPG 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 30/211 (14%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--Y 139
+S G + H++VG+LSP + L E FA G + + +I+ D + + G Y
Sbjct: 2 NSMGGMSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNY 60
Query: 140 AFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVY 199
FV ++ AE A+ +NG+ + IR NW+ Q K T + +
Sbjct: 61 GFVEYMDMRAAETALQTLNGRKIFDTEIRVNWAY------------QGQQNKEDTSNHYH 108
Query: 200 NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKE 253
V+ G ++N+E++ K FS FGT+ D RV K +GY F+ F K
Sbjct: 109 ---------VFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKT 159
Query: 254 TATHAIESIHNTDINGHTVKCFWGKESENNS 284
A AI +++ + ++ W + S
Sbjct: 160 DAEQAIATMNGEWLGSRAIRVNWANQKTQGS 190
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 165/308 (53%), Gaps = 23/308 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DT+ HYH+FVGDLSPE+ + L +AFA FG +S+
Sbjct: 75 LNGRKIFDTEIRVNWAYQ-GQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAAFGTLSDA 133
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPAMTN 181
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K PP
Sbjct: 134 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPPRAG 193
Query: 182 ERKR--------------QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF 227
N ++++ V Q+ N TVY G + + +F
Sbjct: 194 NGGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQQTPAYNSTVYVGNLVPYATQADLIPLF 253
Query: 228 SPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + L
Sbjct: 254 QSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGGALT 313
Query: 288 QPSAPTTP 295
TP
Sbjct: 314 TGGMSPTP 321
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 35/205 (17%)
Query: 83 SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YA 140
SP P++ H++VG+LSP + L E FA G + + +I+ D + + G Y
Sbjct: 5 SPAEAPRRA-----HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYG 58
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYN 200
FV ++ AE A+ +NG+ + IR NW+ + +QN T +
Sbjct: 59 FVEYMDMRAAETALQTLNGRKIFDTEIRVNWAY---------QGQQNKEDTTGHYH---- 105
Query: 201 QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKET 254
V+ G ++N+E+++K F+ FGT+ D RV K +GY F+ F K
Sbjct: 106 --------VFVGDLSPEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTD 157
Query: 255 ATHAIESIHNTDINGHTVKCFWGKE 279
A AI +++ + ++ W +
Sbjct: 158 AEQAIATMNGEWLGSRAIRVNWANQ 182
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 171/289 (59%), Gaps = 15/289 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D + ++YVGN+ VTE LL +FS IGP++GCK+IR+ Y F++++ H AA A
Sbjct: 51 DATSCRSVYVGNIHTKVTEALLAEVFSNIGPLEGCKLIRKE-KSSYGFVDYLDHIYAAVA 109
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L +N R+ + +KVNWA + G ++DT+ HY++FVGDLSPE+ TL AF +
Sbjct: 110 LTTLNGRLIFGQPIKVNWAYASGQ--REDTTGHYNVFVGDLSPEVTDATLFAAFCVYPSC 167
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D ++ +S+G+ FVSF + EAENAI+ M G+WLG+RSIR NW+T+ + + +
Sbjct: 168 SDARVMWDQRSGRSRGFGFVSFRSQQEAENAISEMTGKWLGTRSIRCNWATKTNSSASAD 227
Query: 183 RKRQNSHTKTITFDEVYN----------QSSPTNCTVYCGGFGKDLNEELVSKVFSPF-- 230
H + + + +++P TVY G ++N+ + + F
Sbjct: 228 ETNNGGHAVGMNDSKSEDRPEGSAGDGPENNPQYTTVYVGNLAHEVNQGELHRWFHCMGA 287
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G I D+RV K+KG+ FV++ T E A AI++ + + G +VKC WG +
Sbjct: 288 GVIEDVRVQKDKGFGFVRYRTHEEAALAIQAANGRVLCGKSVKCSWGSK 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 92/204 (45%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D ++ ++VG++ ++ L E F+ G + C+++R ++ Y FV ++
Sbjct: 48 PGFDATSCRSVYVGNIHTKVTEALLAEVFSNIGPLEGCKLIRKEKS----SYGFVDYLDH 103
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A+T +NG+ + + I+ NW+ + +R+ H YN
Sbjct: 104 IYAAVALTTLNGRLIFGQPIKVNWAY-----ASGQREDTTGH---------YN------- 142
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
V+ G ++ + + F + + D RV + +G+ FV F +++ A +AI
Sbjct: 143 -VFVGDLSPEVTDATLFAAFCVYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAENAISE 201
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + +++C W ++ ++++
Sbjct: 202 MTGKWLGTRSIRCNWATKTNSSAS 225
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 132/187 (70%), Gaps = 11/187 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPK----------QDTSNHYHIFVGDLSPEIETQT 111
ALAAMN R + KE+KVNWA++P +Q K Q + +H+H+FVGDLSPEI T+
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTED 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+K AFAPFG IS+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 172 STRKPPA 178
+TRKPPA
Sbjct: 182 ATRKPPA 188
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T T +++++ + T+ V Q S + V+ G +
Sbjct: 67 NGRKIMGKEVKVNWAT------TPSSQKKDTSSSTV----VSTQRSQDHFHVFVGDLSPE 116
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGHT 271
+ E + F+PFG I D RV K+ KGY FV F K A +AI+ + + G
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 272 VKCFW 276
++ W
Sbjct: 177 IRTNW 181
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 184/343 (53%), Gaps = 43/343 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAA 60
DE TLYVGNL + TE +L ALF+ IG V K+I + Y F+ + H A
Sbjct: 42 DEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHVGAQ 101
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
ALAAMN R + +KVNWA+ P + K+DTS +HIFVGDL+ E+ T L+ F FG
Sbjct: 102 RALAAMNGRDVYKMPLKVNWATRP-DGIKKDTSKDHHIFVGDLAQELTTLDLQNEFEKFG 160
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---PP 177
+IS R+VRD QT +SKGY FV+F+KK AE AIT MN + + R +RTNW+T + PP
Sbjct: 161 KISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTNWATSRKLPPP 220
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLN-EELVSKVFSPFGTIVDI 236
+ + K V SS +N TVY GG KD++ ++++ FS FG + ++
Sbjct: 221 TVIDPHK-------------VAQASSFSNTTVYVGGITKDVHTQQVLQASFSRFGVVEEV 267
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ 296
R F+ + FVK T + AT+AI ++ I+G TVKC WGK+ +S
Sbjct: 268 RTFET--FGFVKMQTHQAATNAICEMNGASISGCTVKCRWGKDDHKSSNDG--------- 316
Query: 297 PNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
N Q G+ Y +A ++ PQ+F Q+
Sbjct: 317 ------------NHQYGHNYKEANGSQNSSNTTPQRFVPAAQM 347
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q K D ++VG+L LK FA G + + +++ D L + Y F+++
Sbjct: 38 QAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDA-ALSTSHYCFITYET 96
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
A+ A+ AMNG+ + ++ NW+TR P + + + +
Sbjct: 97 HVGAQRALAAMNGRDVYKMPLKVNWATR-PDGIKKDTSKDHH------------------ 137
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++ G ++L + F FG I + RV ++ KGY FV F KE+A AI
Sbjct: 138 --IFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAIT 195
Query: 261 SIHNTDINGHTVKCFW 276
++N I G V+ W
Sbjct: 196 EMNNKSICGREVRTNW 211
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 176/340 (51%), Gaps = 35/340 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQT 107
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTSNHYH+FVGDLSPE+ + L +AFA FG +S+
Sbjct: 108 LNGRKIFDTEIRVNWAYQ-GTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDA 166
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K +
Sbjct: 167 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQSGGGGGMP 226
Query: 186 -----------------------QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
N ++++ V +Q+ N TVY G +
Sbjct: 227 PGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYESVVSQTPAYNTTVYVGNLVPYCTQAD 286
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ +F G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+
Sbjct: 287 LIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQLVHGRPIKCSWGKDRSA 346
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAY 322
T A P + TP + A Y Y PQ AY
Sbjct: 347 ADTGA-PGSMITPATGAGA------YGGVPMYGMPQPNAY 379
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQ-TLKSKGYAFVSFVKKAEAENAIT 155
H++VG+LSP + L E FA G + + +I+ D + Y FV ++ AE A+
Sbjct: 47 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQ 106
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
+NG+ + IR NW+ Q + K T + + V+ G
Sbjct: 107 TLNGRKIFDTEIRVNWA------------YQGTQNKEDTSNHYH---------VFVGDLS 145
Query: 216 KDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDING 269
++N+E+++K F+ FG++ D RV K +GY F+ F K A AI +++ +
Sbjct: 146 PEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGS 205
Query: 270 HTVKCFWGKE 279
++ W +
Sbjct: 206 RAIRVNWANQ 215
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 173/318 (54%), Gaps = 27/318 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTSNH+H+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 76 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDA 134
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPA--- 178
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K PP
Sbjct: 135 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVR 194
Query: 179 ----------MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
N ++++ V Q+ N TVY G + + +F
Sbjct: 195 SGSMSAGSGGGGGAPAPMNFSGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 254
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + +A
Sbjct: 255 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGG-VAL 313
Query: 289 PSAPTTPQPNSTAPQFPY 306
P+ +P TA PY
Sbjct: 314 PAGSLSP----TAAASPY 327
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 73
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + F V+ G
Sbjct: 74 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSNHFH------------VFVGDL 112
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E+++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 113 SPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 172
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 173 SRAIRVNWANQ 183
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 188/372 (50%), Gaps = 45/372 (12%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVA 59
E++ LYVGNL VTE +L +FS G V+G K+I + G Y F+E+ A
Sbjct: 104 EAKRAHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLNYGFVEYYEMRSA 163
Query: 60 ATALAAMNKRVFLEKEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
TAL + R + E++VNWA +S N K+D S H+H+FVGDLSPE+ L +AFA
Sbjct: 164 ETALQTLGGRKIFDNEIRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDVLAKAFA 223
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG +S+ R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 224 AFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQ 283
Query: 178 AM---------------------TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
M +++ V Q+ N TVY G
Sbjct: 284 GMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEAVVQQAPAYNSTVYTGNLVP 343
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
+ + +F FG IV+IR+ ++G+AFVK T E A AI ++ T ++G +KC W
Sbjct: 344 YCTQADLIPLFQGFGYIVEIRMQADRGFAFVKLDTHENAAMAIVNLTGTPVHGRPLKCSW 403
Query: 277 GKESENNSTLAQPSAPTTP----QPNSTAPQFPYIYNQ-QMGYW-YPQAAAYTATAAQLP 330
GK+ + A P++ T P P + P +Y Q GY YP Y A A
Sbjct: 404 GKDRAS----ADPNSATNPAMAMAPVAGMYGMPQMYGMPQPGYGQYPGYPQYGAPQA--- 456
Query: 331 QQFYQYGQLGYP 342
YGQ GYP
Sbjct: 457 -----YGQPGYP 463
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 SPGNQPKQDTSNH-----YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSK 137
+PG QP + H H++VG+LSP + L+E F+ G + +I+ D + +
Sbjct: 90 APGAQPSNSYTGHPEAKRAHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPD-RNFQHG 148
Query: 138 G--YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITF 195
G Y FV + + AE A+ + G+ + IR NW+ QNS +
Sbjct: 149 GLNYGFVEYYEMRSAETALQTLGGRKIFDNEIRVNWA------------YQNSQQNAVKE 196
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKF 249
D + V+ G ++N+++++K F+ FG++ D RV K +GY F+ F
Sbjct: 197 DLS------GHFHVFVGDLSPEVNDDVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAF 250
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTT 294
K A AI +++ + ++ W N P AP +
Sbjct: 251 RDKTDAEQAIATMNGEWLGSRAIRVNW----ANQKNQGMPGAPGS 291
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 23/306 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTSNH+H+FVGDLSPE+ L +AFA FG +S+
Sbjct: 78 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP--------- 176
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGLPVSGG 196
Query: 177 PAMTNERKRQ-------NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
P + R N ++++ V Q+ N TVY G + + +F
Sbjct: 197 PTASPTRTGAGGAPAPINFQGGPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQS 256
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ + A
Sbjct: 257 IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRADGG--AAG 314
Query: 290 SAPTTP 295
+AP +P
Sbjct: 315 TAPMSP 320
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + F V+ G
Sbjct: 76 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSNHFH------------VFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+++++K F+ FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 175 SRAIRVNWANQ 185
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 134/194 (69%), Gaps = 6/194 (3%)
Query: 89 KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 148
++DTSNHYHIFVGD++PEIETQ L+E F+ FG ++ C+I++D T K KGY FV++ K
Sbjct: 106 QEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYATKE 165
Query: 149 EAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCT 208
EAE A+ MNG++LG+R IRTNW+ R+PP + + K + ++EV+ SS +NCT
Sbjct: 166 EAEEALNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQ------KPLDYNEVFAASSESNCT 219
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDIN 268
+Y GG L EEL+ + F FG I+++R+FKEKGYAFV+F + E AT AI +H ++
Sbjct: 220 IYVGGITNGLCEELLRESFKEFGDILEVRIFKEKGYAFVRFDSHEGATQAIIRMHGKEVG 279
Query: 269 GHTVKCFWGKESEN 282
KC WGKES +
Sbjct: 280 SQLCKCSWGKESND 293
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVA 59
D S ++VG++ + + L FS G V CK+I++ Y F+ + A
Sbjct: 108 DTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYATKEEA 167
Query: 60 ATALAAMNKRVFLEKEMKVNWA-SSPGNQPKQD-------------TSNHYHIFVGDLSP 105
AL MN + ++++ NWA P P +D + ++ I+VG ++
Sbjct: 168 EEALNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFAASSESNCTIYVGGITN 227
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ + L+E+F FG+I RI K KGYAFV F A AI M+G+ +GS+
Sbjct: 228 GLCEELLRESFKEFGDILEVRI------FKEKGYAFVRFDSHEGATQAIIRMHGKEVGSQ 281
Query: 166 SIRTNW 171
+ +W
Sbjct: 282 LCKCSW 287
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 163/280 (58%), Gaps = 6/280 (2%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LY+GN+ VT+++L +FS GPV K+I++ G Y F+E+ A AL
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTDMRSAEQALTT 74
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G ++DT +H+H+FVGDLSPE+ L +AFA F +S
Sbjct: 75 LNGRKIFDSEIRVNWAYQ-GQGNREDTQHHFHVFVGDLSPEVNDDILGKAFAKFASLSEA 133
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNERK 184
R++ D + KS+GY F+SF KA+AE AI MNG+WLGSR+IR NW+ +K +
Sbjct: 134 RVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWANQKTQTGGSRSLG 193
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGY 244
+TF++V Q+ N TVY G + + +F +G IV+IR+ ++G+
Sbjct: 194 LGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRMQADRGF 253
Query: 245 AFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
AFVK T A +I S+ N ++G +KC WGK+ ++++
Sbjct: 254 AFVKLDTHANAALSITSLQNQLVHGRPIKCSWGKDRQSDA 293
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H+++G++SP + Q L E F+ G + + +I++D + G Y FV + AE A+
Sbjct: 14 HLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQD-RNFHHGGYNYGFVEYTDMRSAEQAL 72
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
T +NG+ + IR NW A + R+++ + V+ G
Sbjct: 73 TTLNGRKIFDSEIRVNW------AYQGQGNREDTQ---------------HHFHVFVGDL 111
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N++++ K F+ F ++ + RV K +GY F+ F K A AI +++ +
Sbjct: 112 SPEVNDDILGKAFAKFASLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLG 171
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 172 SRAIRVNWANQ 182
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK-------GYAFVKFTTKETA 255
+P +Y G + +++++++FS G +V ++ +++ Y FV++T +A
Sbjct: 9 APKKPHLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTDMRSA 68
Query: 256 THAIESIHNTDINGHTVKCFWGKESENN 283
A+ +++ I ++ W + + N
Sbjct: 69 EQALTTLNGRKIFDSEIRVNWAYQGQGN 96
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 191/369 (51%), Gaps = 27/369 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 64 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADR 123
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA + K+DTS H+HIFVGDLS E+ L +AF+ FG
Sbjct: 124 AMQTLNGRRVHQSEIRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSAFGS 183
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 243
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T F D + Q+ TVY G V +
Sbjct: 244 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 303
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A+ AI ++ ++NG +KC WGK+ N
Sbjct: 304 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTPNQGF 363
Query: 287 AQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQ------AAAYTATAAQLPQQFYQY--GQ 338
PS P +PQ ++ P FP Y Q G YP+ +A ++AAQ Q Y Q
Sbjct: 364 -DPSQPYSPQ-SAQGPGFPGSYYAQYGGEYPRNPGSQCSADAISSAAQYGGQPGNYPAAQ 421
Query: 339 LGYPQGYVG 347
G P G+ G
Sbjct: 422 TGSPGGFAG 430
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 197/364 (54%), Gaps = 30/364 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + + Y F+E+ A
Sbjct: 89 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNHRGYNYGFVEYDDPGAAER 148
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 149 AMQTLNGRRVHQNEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGS 208
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
IS R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIH 268
Query: 180 TNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ +Q T T ++D V NQ+ T Y G + + +
Sbjct: 269 QQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPL 328
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE-SENNST 285
F FG +V+ R+ ++G+AF+K + E A AI ++ +NG +KC WGK+ + N+
Sbjct: 329 FQNFGYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKDRNPNHHQ 388
Query: 286 LAQPSAPTTPQPNSTAPQFP-----YIYNQQMGYWYP--QAAAYTATAAQLPQQFYQYG- 337
P+ +PQ + AP +P Y YNQ G + P Q + Y AQ P YG
Sbjct: 389 QFDPNHQYSPQ-GAQAPGYPGAPGAYPYNQYGGAYGPPGQQSGYAGPQAQSPA---GYGP 444
Query: 338 QLGY 341
Q+GY
Sbjct: 445 QMGY 448
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 168/312 (53%), Gaps = 24/312 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTS H+H+FVGDLSPE+ + L +AFA FG +S+
Sbjct: 79 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAAFGTMSDA 137
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 138 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAVGAG 197
Query: 186 Q------------------NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF 227
N ++++ V Q+ N TVY G + + +F
Sbjct: 198 APAPRPGGGGGVGTAPAPINFQGGPLSYESVVQQTPSYNSTVYVGNLVPYCTQADLIPLF 257
Query: 228 SPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE-SENNSTL 286
G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK+ ++ +T
Sbjct: 258 QSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRTDGQATA 317
Query: 287 AQPSAPTTPQPN 298
P+A P N
Sbjct: 318 MSPTATAAPYGN 329
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYLDMRAAETAL 76
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN + F V+ G
Sbjct: 77 QTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSGHFH------------VFVGDL 115
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+E+++K F+ FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 116 SPEVNDEVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 175
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 176 SRAIRVNWANQ 186
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 167/274 (60%), Gaps = 14/274 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
+++V + SV E LL +FS +G V CK++R+ + Y F+EFV T A A M
Sbjct: 44 SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHAGYGFVEFVDSTTARFAKDNM 103
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ RV +E+KVNW+ + +Q+ +Y IFVG L PE+ L + F FG +++ R
Sbjct: 104 DGRVVYGRELKVNWSYTA----QQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDAR 159
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+++ QT KSKGY FV+F++K +AE A+ MNG+ L R+I+ NW T + T + KR
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKR- 218
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
++DE+ N++S NCTVY G K++ + + ++ + +G+I ++R+ K+KGYAF
Sbjct: 219 -------SYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAF 271
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+KF+ E+AT AI + ING T++C WG+ES
Sbjct: 272 IKFSKHESATSAILMCNGKIINGSTLRCSWGRES 305
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 32/222 (14%)
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
+N + V + ++ L F+ G + +C+I+RD + + GY FV FV A
Sbjct: 40 ANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHA-GYGFVEFVDSTTARF 98
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
A M+G+ + R ++ NWS Q + N ++ G
Sbjct: 99 AKDNMDGRVVYGRELKVNWSY------------------------TAQQENQGNYKIFVG 134
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTD 266
G ++N++L+ K F FG + D RV K KGY FV F KE A A++ ++
Sbjct: 135 GLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEK 194
Query: 267 INGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
+ G +K W S S QP N T+ Q +Y
Sbjct: 195 LEGRNIKVNW-VTSNIASKTEQPKRSYDEINNETSSQNCTVY 235
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
SQ T+Y+GN+ +V + L L ++ G ++ ++ ++ G YAF++F H A +A+
Sbjct: 229 SQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKG---YAFIKFSKHESATSAIL 285
Query: 65 AMNKRVFLEKEMKVNWA 81
N ++ ++ +W
Sbjct: 286 MCNGKIINGSTLRCSWG 302
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 197 EVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK-----GYAFVK 248
E + S P N +V+ G + ++E L+ ++FS G +V ++ ++K GY FV+
Sbjct: 30 ETTDSSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHAGYGFVE 89
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFW 276
F TA A +++ + G +K W
Sbjct: 90 FVDSTTARFAKDNMDGRVVYGRELKVNW 117
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 189/373 (50%), Gaps = 23/373 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 87 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAER 146
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA NQ K+DTS H+HIFVGDLS E+ + L +AF+ FG
Sbjct: 147 AMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGS 206
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 266
Query: 180 TNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ +Q T T ++D + Q+ T Y G + + +
Sbjct: 267 QQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPL 326
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A AI ++ +NG +KC WGK+ N
Sbjct: 327 FQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQ 386
Query: 287 AQPSAPTTPQPNSTA--PQFPYIYNQQMGYWYP-QAAAYTATAAQLPQQF-YQYGQLGYP 342
P+ P +PQ T P P Y G YP Q Y AQ P + Q G G P
Sbjct: 387 FDPNQPYSPQSAQTPGYPGTPSTYFNNYGNSYPGQQGNYNGPQAQSPAGYGSQMGYNGPP 446
Query: 343 QGYVGMVGRQVPG 355
G GR PG
Sbjct: 447 S--AGGYGRGQPG 457
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 167/274 (60%), Gaps = 14/274 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
+++V + SV E LL +FS +G V CK++R+ + Y F+EFV T A A M
Sbjct: 44 SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHAGYGFVEFVDSTTARFAKDNM 103
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ RV +E+KVNW+ + +Q+ +Y IFVG L PE+ L + F FG +++ R
Sbjct: 104 DGRVVYGRELKVNWSYTA----QQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDAR 159
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+++ QT KSKGY FV+F++K +AE A+ MNG+ L R+I+ NW T + T + KR
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKR- 218
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
++DE+ N++S NCTVY G K++ + + ++ + +G+I ++R+ K+KGYAF
Sbjct: 219 -------SYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAF 271
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+KF+ E+AT AI + ING T++C WG+ES
Sbjct: 272 IKFSKHESATSAILMCNGKIINGSTLRCSWGRES 305
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 32/222 (14%)
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
+N + V + ++ L F+ G + +C+I+RD + + GY FV FV A
Sbjct: 40 ANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHA-GYGFVEFVDSTTARF 98
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
A M+G+ + R ++ NWS Q + N ++ G
Sbjct: 99 AKDNMDGRVVYGRELKVNWSY------------------------TAQQENQGNYKIFVG 134
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTD 266
G ++N++L+ K F FG + D RV K KGY FV F KE A A++ ++
Sbjct: 135 GLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEK 194
Query: 267 INGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
+ G +K W S S QP N T+ Q +Y
Sbjct: 195 LEGRNIKVNW-VTSNIASKTEQPKRSYDEINNETSSQNCTVY 235
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
+ P + +R Q S T+T N +S + V+ G + ++E L+ ++FS G +V
Sbjct: 14 RAPQLYQQRPPQQSSTETTESSLPINANSKS---VHVSGIHESVDEILLGRIFSIVGHVV 70
Query: 235 DIRVFKEK-----GYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
++ ++K GY FV+F TA A +++ + G +K W
Sbjct: 71 SCKIMRDKSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNW 117
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
SQ T+Y+GN+ +V + L L ++ G ++ ++ ++ G YAF++F H A +A+
Sbjct: 229 SQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKG---YAFIKFSKHESATSAIL 285
Query: 65 AMNKRVFLEKEMKVNWA 81
N ++ ++ +W
Sbjct: 286 MCNGKIINGSTLRCSWG 302
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 193/382 (50%), Gaps = 38/382 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-----PGNDP------------YAFLE 52
LYVG LD VTE++L +F G V+ K+I + PG+ Y F+E
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNYGFVE 152
Query: 53 FVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
+ A A+ +N R + E++VNWA NQ K+DTS H+HIFVGDLS E+ + L
Sbjct: 153 YDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVL 212
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+AF+ FG +S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+
Sbjct: 213 LQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 272
Query: 173 TRK--PPAMTNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKD 217
+K P + +Q T T ++D + Q+ T Y G
Sbjct: 273 NQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPY 332
Query: 218 LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
+ + +F FG +V+ R ++G+AF+K T E A AI ++ +NG +KC WG
Sbjct: 333 TTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWG 392
Query: 278 KESENNSTLAQPSAPTTPQPNSTA--PQFPYIYNQQMGYWYP-QAAAYTATAAQLPQQF- 333
K+ N P+ P +PQ T P P Y Q G YP Q A Y AQ P +
Sbjct: 393 KDKTPNPQQFDPNQPYSPQSAQTPGYPGTPSTYFNQYGNSYPGQQANYNGPQAQSPAGYG 452
Query: 334 YQYGQLGYPQGYVGMVGRQVPG 355
Q G G P G GR PG
Sbjct: 453 SQMGYNGPPS--AGGYGRGQPG 472
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 40/206 (19%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV--------------RDPQTLKSKGY 139
N ++VG L P + L++ F G + N +I+ D Q K Y
Sbjct: 89 NKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNY 148
Query: 140 AFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVY 199
FV + AE A+ +NG+ + IR NW+ + N+ K T +
Sbjct: 149 GFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQS-----------NNQNKEDTSGHFH 197
Query: 200 NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKE 253
++ G ++N+E++ + FS FG++ + RV + +GY FV F +
Sbjct: 198 ---------IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRP 248
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A A+ S+ + ++C W +
Sbjct: 249 DAEKALSSMDGEWLGSRAIRCNWANQ 274
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 40/334 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI----REPGNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 77
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DT+NHYH+FVGDLSPE+ L +AF+ FG +S+
Sbjct: 78 LNGRRIFDTEIRVNWAYQ-GQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 137 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSLGGGGG 196
Query: 176 -----------------PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
P N +++++V Q+ N TVY G
Sbjct: 197 GGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGNLVPYC 256
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ + +F G + +IR+ ++G+AFVK T E A AI + ++G +KC WGK
Sbjct: 257 TQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 316
Query: 279 ESENNSTLAQ--------PSAPTTPQPNSTAPQF 304
+ + + A P +PT P P +
Sbjct: 317 DRADPNAAAAGAAAVTATPMSPTAGSPYGNMPMY 350
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYLDMRAAETAL 75
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ + +QN T + V+ G
Sbjct: 76 QTLNGRRIFDTEIRVNWAY---------QGQQNKEDTT------------NHYHVFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+++++K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 115 SPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 174
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 175 SRAIRVNWANQ 185
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 154/239 (64%), Gaps = 5/239 (2%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-NDPYAFLEFVHHTVAATALAAMNKR 69
YVGNLD T+EL+C++F++I V CK+I PY F+EF H A A M++R
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYKGPYCFVEFETHADAQEAKFRMDQR 60
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
++K++KVNWA++ + DT+NH+HIFVGDL+ ++ L++ F PFGEIS R+V+
Sbjct: 61 TVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVK 120
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
DP KSKG+ FVSFV++ +A AI M+ +G + ++TNW+ RK N + +
Sbjct: 121 DPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK----NNPTQSKYVC 176
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVK 248
K + +D+V++QSS N TVY G D+ + + ++FS +G+I++ +VF +KGYAF+K
Sbjct: 177 VKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFIK 235
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 25/152 (16%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L +V LL F G + +V+++P + + F+ FV AA A+A M
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEM 148
Query: 67 NKRVFLEKEMKVNWASSPGN--QPK--------------QDTSNHYHIFVGDLSPEIETQ 110
+ K++K NWA+ N Q K Q + + ++VG+L P+++
Sbjct: 149 DSVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDY 208
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFV 142
L++ F+ +G I ++ D KGYAF+
Sbjct: 209 ELQQMFSQYGSILETKVFAD------KGYAFI 234
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 161/307 (52%), Gaps = 38/307 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VT+ +L +F+ GPV K+I++ G Y F+E+ A AL
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALTT 83
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA GNQ K+DT +HYH+FVGDLSPE+ L +AF FG +S
Sbjct: 84 LNGRKIFDAEIRVNWAYQ-GNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F+SF KA+AE AI +MNG+WLGSR+IR NW+ +K
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 176 ------------PPA-----------MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
PP +F+ V +Q+ N TVY G
Sbjct: 203 GTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGGAVGSFETVASQTPEFNTTVYVG 262
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + +F +G IV+IR+ ++G+AFVK T + A AI + N ++G +
Sbjct: 263 NLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGRPI 322
Query: 273 KCFWGKE 279
KC WGK+
Sbjct: 323 KCSWGKD 329
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I++D + + G Y FV + AE A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQD-RNFQHGGFNYGFVEYADMRSAEQAL 81
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
T +NG+ + IR NW+ + N+ K H + V+ G
Sbjct: 82 TTLNGRKIFDAEIRVNWAYQG-----NQNKEDTQH----------------HYHVFVGDL 120
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N++++SK F FG++ + RV K +GY F+ F K A AI S++ +
Sbjct: 121 SPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLG 180
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 181 SRAIRVNWANQ 191
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 192/377 (50%), Gaps = 33/377 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-----PGNDP-------YAFLEFVHHT 57
LYVG LD VTE++L +F G V+ K+I + PG++ Y F+E+
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDDPG 152
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ +N R + E++VNWA NQ K+DTS H+HIFVGDLS E+ + L +AF+
Sbjct: 153 AAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFS 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-- 175
FG +S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 213 AFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQ 272
Query: 176 PPAMTNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
P + +Q T T ++D + Q+ T Y G +
Sbjct: 273 PSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQND 332
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ +F FG +V+ R ++G+AF+K T E A AI ++ +NG +KC WGK+
Sbjct: 333 LVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTP 392
Query: 283 NSTLAQPSAPTTPQPNSTA--PQFPYIYNQQMGYWYP-QAAAYTATAAQLPQQF-YQYGQ 338
N P+ P +PQ T P P Y G YP Q Y AQ P + Q G
Sbjct: 393 NPQQFDPNQPYSPQSAQTPGYPGTPSTYFNNYGNSYPGQQGNYNGPQAQSPAGYGSQMGY 452
Query: 339 LGYPQGYVGMVGRQVPG 355
G P G GR PG
Sbjct: 453 NGPPS--AGGYGRGQPG 467
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 35/201 (17%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLK-------SKG--YAFVSF 144
N ++VG L P + L++ F G + N +I+ D K KG Y FV +
Sbjct: 89 NKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEY 148
Query: 145 VKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
AE A+ +NG+ + IR NW+ + N+ K T +
Sbjct: 149 DDPGAAERAMQTLNGRRVHQSEIRVNWAYQS-----------NNQNKEDTSGHFH----- 192
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHA 258
++ G ++N+E++ + FS FG++ + RV + +GY FV F + A A
Sbjct: 193 ----IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKA 248
Query: 259 IESIHNTDINGHTVKCFWGKE 279
+ S+ + ++C W +
Sbjct: 249 LSSMDGEWLGSRAIRCNWANQ 269
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 163/307 (53%), Gaps = 38/307 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VT+ +L +F+ GPV K+I++ G Y F+E+ A AL
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALTT 83
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA GNQ K+DT +HYH+FVGDLSPE+ L +AF FG +S
Sbjct: 84 LNGRKIFDAEIRVNWAYQ-GNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F+SF KA+AE AI +MNG+WLGSR+IR NW+ +K
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 176 ------------PPA-----------MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
PPA + +++ V +Q+ N TVY G
Sbjct: 203 ATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGAVGSYETVASQTPEFNTTVYVG 262
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + +F +G IV+IR+ ++G+AFVK T + A AI + N ++G +
Sbjct: 263 NLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGRPI 322
Query: 273 KCFWGKE 279
KC WGK+
Sbjct: 323 KCSWGKD 329
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I++D + + G Y FV + A+ A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQD-RNFQHGGFNYGFVEYADMRSADQAL 81
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
T +NG+ + IR NW+ + N+ K H + V+ G
Sbjct: 82 TTLNGRKIFDAEIRVNWAYQG-----NQNKEDTQH----------------HYHVFVGDL 120
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N++++SK F FG++ + RV K +GY F+ F K A AI S++ +
Sbjct: 121 SPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLG 180
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 181 SRAIRVNWANQ 191
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 166/274 (60%), Gaps = 14/274 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
+++V + SV E LL +FS +G V CK++R+ + Y F+EFV T A A M
Sbjct: 44 SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGTHAGYGFVEFVDSTTARFAKDNM 103
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ RV +E+KVNW+ + +Q+ Y IFVG L PE+ L + F FG +++ R
Sbjct: 104 DGRVVYGRELKVNWSYTA----QQENQGSYKIFVGGLQPEVNDDLLYKTFQKFGRVTDAR 159
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+++ QT KSKGY FV+F++K +AE A+ MNG+ L R+I+ NW T + T + KR
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKR- 218
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
++DE+ N++S NCTVY G K++ + + ++ + +G+I ++R+ K+KGYAF
Sbjct: 219 -------SYDEINNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAF 271
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+KF+ E+AT AI + ING T++C WG+ES
Sbjct: 272 IKFSKHESATSAILMCNGKIINGSTLRCSWGRES 305
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
+N + V + ++ L F+ G + +C+I+RD + GY FV FV A
Sbjct: 40 ANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGTHA-GYGFVEFVDSTTARF 98
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
A M+G+ + R ++ NWS T +++ Q S+ ++ G
Sbjct: 99 AKDNMDGRVVYGRELKVNWS------YTAQQENQGSY------------------KIFVG 134
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTD 266
G ++N++L+ K F FG + D RV K KGY FV F KE A A++ ++
Sbjct: 135 GLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEK 194
Query: 267 INGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
+ G +K W S S QP N T+ Q +Y
Sbjct: 195 LEGRNIKVNW-VTSNIASKTEQPKRSYDEINNETSIQNCTVY 235
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAA 65
Q T+Y+GN+ +V + L L ++ G ++ ++ ++ G YAF++F H A +A+
Sbjct: 230 QNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKG---YAFIKFSKHESATSAILM 286
Query: 66 MNKRVFLEKEMKVNWA 81
N ++ ++ +W
Sbjct: 287 CNGKIINGSTLRCSWG 302
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 23 LLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKV 78
+L +F+ GPV+ K+I + G Y F+E++ A TAL +N R + E++V
Sbjct: 1 MLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIRV 60
Query: 79 NWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
NWA G Q K+DTSNHYH+FVGDLSPE+ L +AF+ FG +S+ R++ D + KS+G
Sbjct: 61 NWAYQ-GQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRG 119
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----PPAMTNERKR-------QN 187
Y F++F K +AE AI MNG+WLGSR+IR NW+ +K PPA N
Sbjct: 120 YGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMN 179
Query: 188 SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFV 247
++++ V Q+ N TVY G + + +F G + +IR+ ++G+AFV
Sbjct: 180 FQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFAFV 239
Query: 248 KFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
K T E A AI + ++G +KC WGK+ ++ + L+ S TP
Sbjct: 240 KLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRDSGAALSSGSLSPTP 287
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 192/381 (50%), Gaps = 37/381 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-----PGNDP-----------YAFLEF 53
LYVG LD VTE++L +F G V+ K+I + PG++ Y F+E+
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFVEY 152
Query: 54 VHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
A A+ +N R + E++VNWA NQ K+DTS H+HIFVGDLS E+ + L
Sbjct: 153 DDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLL 212
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
+AF+ FG +S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+
Sbjct: 213 QAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWAN 272
Query: 174 RK--PPAMTNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDL 218
+K P + +Q T T ++D + Q+ T Y G
Sbjct: 273 QKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYT 332
Query: 219 NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ + +F FG +V+ R ++G+AF+K T E A AI ++ +NG +KC WGK
Sbjct: 333 TQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGK 392
Query: 279 ESENNSTLAQPSAPTTPQPNSTA--PQFPYIYNQQMGYWYP-QAAAYTATAAQLPQQF-Y 334
+ N P+ P +PQ T P P Y G YP Q Y AQ P +
Sbjct: 393 DKTPNPQQFDPNQPYSPQSAQTPGYPGTPSTYFNNYGNSYPGQQGNYNGPQAQSPAGYGS 452
Query: 335 QYGQLGYPQGYVGMVGRQVPG 355
Q G G P G GR PG
Sbjct: 453 QMGYNGPPS--AGGYGRGQPG 471
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIV-------------RDPQTLKSKGYA 140
N ++VG L P + L++ F G + N +I+ RD + K Y
Sbjct: 89 NKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYG 148
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYN 200
FV + AE A+ +NG+ + IR NW+ + N+ K T +
Sbjct: 149 FVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQS-----------NNQNKEDTSGHFH- 196
Query: 201 QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKET 254
++ G ++N+E++ + FS FG++ + RV + +GY FV F +
Sbjct: 197 --------IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 248
Query: 255 ATHAIESIHNTDINGHTVKCFWGKE 279
A A+ S+ + ++C W +
Sbjct: 249 AEKALSSMDGEWLGSRAIRCNWANQ 273
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 177/330 (53%), Gaps = 20/330 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 86 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAKGYNYGFVEYDDPGAAER 145
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 146 AMQTLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGS 205
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------ 175
IS R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 176 ------PPAMTNERKRQNSHTKT---ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
MT + H T ++D V NQ+ T Y G + + +
Sbjct: 266 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVPL 325
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE-SENNST 285
F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ + N+
Sbjct: 326 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNHHQ 385
Query: 286 LAQPSAPTTPQPNSTA--PQFPYIYNQQMG 313
P P +PQ T P P Y Q G
Sbjct: 386 QFDPHQPYSPQSAQTPGYPGTPSTYFNQYG 415
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 168/300 (56%), Gaps = 26/300 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D + ++YVGN+ + VTE LL +F+ +GP++GCK+I++ Y F+++ H AA A
Sbjct: 50 DATSCRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKE-KSSYGFVDYFDHRSAAAA 108
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N ++ + +KVNWA + G ++DT+ HY+IFVGDLSPE+ TL AF +
Sbjct: 109 IITLNGKLIFGQSIKVNWAYASGQ--REDTTGHYNIFVGDLSPEVTDATLYAAFFMYPGC 166
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR-------- 174
S+ R++ D ++ +S+GY FVSF K EAE AI MNG+WLGSR IR NW+T+
Sbjct: 167 SDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATKSTGSQEDV 226
Query: 175 ---------KPPAMTNERKRQNSHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEE 221
+ A+ + +Q + D P N TVY G ++ +
Sbjct: 227 PTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGNLAHEVTQT 286
Query: 222 LVSKVFSPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ + F G I D+RV KEKG+ FV++ T E A +AI++ + I G +VKC WG +
Sbjct: 287 ELHRQFHALGVGVIEDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKSVKCSWGSK 346
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 37/229 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D ++ ++VG++ ++ L E FA G + C++++ ++ Y FV +
Sbjct: 47 PGFDATSCRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKS----SYGFVDYFDH 102
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ + +SI+ NW+ + +R+ H YN
Sbjct: 103 RSAAAAIITLNGKLIFGQSIKVNWAY-----ASGQREDTTGH---------YN------- 141
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + F + D RV + +GY FV F +K+ A AI
Sbjct: 142 -IFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINE 200
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQ 310
++ + ++C W + ST +Q P TP P S Q + Q
Sbjct: 201 MNGKWLGSRPIRCNWATK----STGSQEDVP-TPGPVSVPEQVAVVQVQ 244
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 180/374 (48%), Gaps = 64/374 (17%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI----REPGNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E++ A TAL
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G+Q K+DTSNH+H+FVGDLSPE+ + L +AF+ FG +S+
Sbjct: 68 LNGRKIFDTEIRVNWAYQ-GSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDA 126
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 127 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTMGGAPVTGG 186
Query: 186 QNSHTKT-------------------------------------ITFDEVYNQSSPTNCT 208
++F++V Q+ N T
Sbjct: 187 GGPPMGGMGGGMGGGVGGIRMGGPPMAGAGGAPASINFAPGGGPLSFEQVVAQTPAYNTT 246
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDIN 268
VY G + + +F G I +IR+ ++G+AFVK T E A AI + ++
Sbjct: 247 VYVGNLVPYTTQADLIPLFQGIGYISEIRMQADRGFAFVKLDTHEHAALAIVQLQGQLVH 306
Query: 269 GHTVKCFWGKESENNST-LAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAA 327
G +KC WGK+ + T P++P P P Y PQ
Sbjct: 307 GRPIKCSWGKDRASGETGTMSPTSPAGVTPYGNMPL----------YGMPQ--------- 347
Query: 328 QLPQQFYQYGQLGY 341
P Q+ QYG GY
Sbjct: 348 --PTQYGQYGFSGY 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I+ D + + G Y FV ++ AE A+
Sbjct: 7 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETAL 65
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + IR NW+ Q S K T + + V+ G
Sbjct: 66 QTLNGRKIFDTEIRVNWA------------YQGSQNKEDTSNHFH---------VFVGDL 104
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++++E++ K FS FGT+ D RV K +GY F+ F K A AI +++ +
Sbjct: 105 SPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLG 164
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 165 SRAIRVNWANQ 175
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 188/358 (52%), Gaps = 32/358 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAATALAAMN 67
LY+G LD VTEE+L +F G V+ K+I + Y F+E+ A A+ +N
Sbjct: 86 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQTLN 145
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 146 GRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 205
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNERKR 185
+ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K P + +
Sbjct: 206 MWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQ 265
Query: 186 QNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
T T +++ + Q+ TVY G V +F FG
Sbjct: 266 AMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGF 325
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA-QPSA 291
+V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ ++ A P+
Sbjct: 326 VVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPSAQGAFDPAQ 385
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYG--QLGYPQGYVG 347
P +PQ ++ AP FP +YPQ AQ Q YG Q G P GY G
Sbjct: 386 PYSPQ-SAQAPGFPGTPT-----YYPQ------YGAQYGGQPGNYGGPQTGSPAGYAG 431
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 162/307 (52%), Gaps = 38/307 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VT+ +L +F+ GPV K+I++ G Y F+E+ A AL
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALTT 83
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA GNQ K+DT +HYH+FVGDLSPE+ L +AF FG +S
Sbjct: 84 LNGRKIFDAEIRVNWAYQ-GNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---------- 175
R++ D + KS+GY F+SF KA+AE AI +MNG+WLGSR+IR NW+ +K
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 176 -PPAMTNERKRQNSHTKTI----------------------TFDEVYNQSSPTNCTVYCG 212
P+ + +++ V +Q+ N TVY G
Sbjct: 203 GTPSYPAPPMGAPPAPAGVPSAYGAPAPGVVPGVGVGGAVGSYETVASQTPEFNTTVYVG 262
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + +F +G IV+IR+ ++G+AFVK T + A AI + N ++G +
Sbjct: 263 NLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGRPI 322
Query: 273 KCFWGKE 279
KC WGK+
Sbjct: 323 KCSWGKD 329
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + + +I++D + + G Y FV + A+ A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQD-RNFQHGGFNYGFVEYADMRSADQAL 81
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
T +NG+ + IR NW+ + N+ K H + V+ G
Sbjct: 82 TTLNGRKIFDAEIRVNWAYQG-----NQNKEDTQH----------------HYHVFVGDL 120
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N++++SK F FG++ + RV K +GY F+ F K A AI S++ +
Sbjct: 121 SPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLG 180
Query: 269 GHTVKCFWGKE 279
++ W +
Sbjct: 181 SRAIRVNWANQ 191
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 188/364 (51%), Gaps = 31/364 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LY+G LD VTEE+L +F G V+ K+I + Y F+E+ A
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 138 AMQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGS 197
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 198 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 257
Query: 180 TNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T +++ + Q+ TVY G V +
Sbjct: 258 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPL 317
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K + E A AI ++ ++NG +KC WGK+ N+
Sbjct: 318 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 377
Query: 287 A-QPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYG--QLGYPQ 343
P P +PQ ++ AP FP GY YPQ AQ Q YG Q G P
Sbjct: 378 GFDPVQPFSPQ-SAQAPGFP---GTPTGY-YPQ------YGAQYGGQPGNYGGPQAGSPA 426
Query: 344 GYVG 347
GY G
Sbjct: 427 GYAG 430
>gi|148685701|gb|EDL17648.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Mus musculus]
gi|149067623|gb|EDM17175.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_c [Rattus norvegicus]
Length = 252
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 153/275 (55%), Gaps = 32/275 (11%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PK 58
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKG
Sbjct: 59 STQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG 118
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQ 303
Y+FV+F+T E+A HAI S++ T I GH VKC+WGKES P+ T
Sbjct: 119 YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES----------------PDMTK-N 161
Query: 304 FPYIYNQQMGYWY------PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVP--G 355
F + Q G W Q Y A Q+P YG G P G Q P
Sbjct: 162 FQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP----PYGVYGQPWNQQGFGVDQSPSAA 217
Query: 356 WQGIPGAQPTAQQMAVAQAQPSMMAAYAMQQFPTQ 390
W G GAQP Q P A Y M FPTQ
Sbjct: 218 WMGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ 252
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------Q 90
Y F+ F + A A+ M + ++++ NWA+ PK Q
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQ 76
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ + ++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 130
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 161
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 26/322 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTV 58
E LYVG LD +TE++L +F G V K+I + Y F+E+
Sbjct: 83 EPNKRALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGT 142
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
A A+ +N R + E++VNWA NQPK+DTSNH+HIFVGDLS E+ + L +AF+
Sbjct: 143 AERAMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 202
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG++S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 203 FGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQP 262
Query: 179 MTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
++++ S T T ++ V NQ+ T Y G + +
Sbjct: 263 SISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDL 322
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES--- 280
+F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 323 VPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPT 382
Query: 281 ---ENNSTLAQPSAPTTPQPNS 299
+ S P++ P PN+
Sbjct: 383 GQFDGYSPAGGPNSAYPPTPNA 404
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 178/332 (53%), Gaps = 21/332 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LY+G LD VTE++L +F G V+ K+I + + Y F+E+ A A+A +N
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLN 153
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 154 GRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 213
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
+ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 214 MWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 273
Query: 188 SHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ T T +D V Q+ T Y G + + +F FG
Sbjct: 274 AMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGY 333
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA--QPS 290
+V+ R ++G+AFVK T E A AI + ++NG +KC WGK+ P
Sbjct: 334 VVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQFEGYSPQ 393
Query: 291 APTTPQPN-STAPQFPYIYNQQMGYWYPQAAA 321
TP N ST+P FP Y+ G PQ A
Sbjct: 394 QSGTPTFNSSTSPYFPQ-YSGPSGPMTPQGGA 424
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 183/365 (50%), Gaps = 27/365 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 72 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADR 131
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+A +N R + E++VNWA K+DTSNH+HIFVGDLS E+ L +AF+ FG
Sbjct: 132 AMATLNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGS 191
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 251
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T F + + Q+ T Y G V +
Sbjct: 252 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTHTDVVPL 311
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ NS
Sbjct: 312 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNSQS 371
Query: 287 AQP-SAPTTPQPNSTAPQFPYIYNQQMGYWYPQ-AAAYTATAAQL--PQQFYQYGQLGYP 342
P P +PQ S AP FP +YPQ A Y PQ G G P
Sbjct: 372 FDPQQQPYSPQ-TSQAPGFPGTPT-----YYPQYGAQYNGQQGNFGGPQAASPAGYSGSP 425
Query: 343 QGYVG 347
GY G
Sbjct: 426 MGYGG 430
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 173/323 (53%), Gaps = 22/323 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAATALAAMN 67
LYVG LD VTEE+L +F G V+ K+I + + Y F+E+ A A+ +N
Sbjct: 88 LYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAERAMQTLN 147
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA K+DT+NH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 148 GRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEARV 207
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNERK-- 184
+ D +T +S+GY FV+F +A+AE A+++M+G+WLGSR+IR NW+ +K P+++ +
Sbjct: 208 MWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMA 267
Query: 185 -----------RQNSHTKTI-TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
N T + ++D + Q+ T Y G + + +F FG
Sbjct: 268 AMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGY 327
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA--QPS 290
+V+ R ++G+AFVK T E A AI + ++NG +KC WGK+ P
Sbjct: 328 VVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQFDAYSPQ 387
Query: 291 APTTPQPNSTAPQFPYIYNQQMG 313
P TPQ PQ P Y Q G
Sbjct: 388 QPNTPQ---YPPQTPSAYFPQYG 407
>gi|355724189|gb|AES08142.1| TIA1 cytotoxic granule-associated RNA binding protein [Mustela
putorius furo]
Length = 261
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 141/228 (61%), Gaps = 17/228 (7%)
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
E + R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 7 EEYDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA-- 64
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ S+TK +++DEV NQSSP+NCTVYCGG L E+L+ + FSPFG I++IRVF
Sbjct: 65 -PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFP 123
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
+KGY+FV+F + E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 124 DKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQI 176
Query: 301 APQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 177 G--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 220
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------Q 90
Y F+ F + A A+ M + ++++ NWA+ PK Q
Sbjct: 25 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQ 84
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ ++ ++ G ++ + Q +++ F+PFG+I R+ D KGY+FV F A
Sbjct: 85 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 138
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
+AI ++NG + ++ W ++ M N ++QN I + + Y Q
Sbjct: 139 AHAIVSVNGTTIEGHVVKCYWG-KETLDMINPVQQQNQ----IGYPQAYGQ 184
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 81 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 137
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 138 AAHAIVSVNGTTIEGHVVKCYWG 160
>gi|417397890|gb|JAA45978.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily [Desmodus rotundus]
Length = 253
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PK 58
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKG
Sbjct: 59 STQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG 118
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
Y+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 119 YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 155
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------- 97
Y F+ F + A A+ M + ++++ NWA+ PK N+
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 98 -------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 130
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 161
>gi|71297004|gb|AAH30025.1| TIAL1 protein [Homo sapiens]
Length = 252
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PK 58
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKG
Sbjct: 59 STQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG 118
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
Y+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 119 YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 155
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------- 97
Y F+ F + A A+ M + ++++ NWA+ PK N+
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 98 -------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 130
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 131 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 161
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 188/367 (51%), Gaps = 29/367 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V K+I + + Y F+EF A
Sbjct: 86 EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAA 145
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 146 ERAMQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 205
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++A+AE A+T+M+G+WLGSR+IR NW+ +K
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 266 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 325
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE--- 281
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 326 PLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKDRPPTG 385
Query: 282 --NNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ-YGQ 338
+N Q ++P P P FP Y G PQ A + PQ Q +GQ
Sbjct: 386 QFDNFPGQQANSPFASSP---GPYFPQ-YGGPGGPMTPQGPAQAGRGWEQPQMAQQGFGQ 441
Query: 339 LGYPQGY 345
+ GY
Sbjct: 442 VPGNTGY 448
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 170/313 (54%), Gaps = 16/313 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 55 DASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 113
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DTS H+++FVGDLSPE+ TL F+ +
Sbjct: 114 IMTLHGRQLYGQALKVNWAYA--NSSREDTSGHFNVFVGDLSPEVTDATLFACFSVYTTC 171
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF +A++AI M G+WLG+R IR NW+T+ +NE
Sbjct: 172 SDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNE 231
Query: 183 RKRQNSHTKTITFD-------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPFG 231
K +S + + + N+ +P N TVY G D+ + + F G
Sbjct: 232 EKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHALG 291
Query: 232 TIV--DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
V ++RV KG+ FV++ T E A AI+ + + G T+KC WG + T + P
Sbjct: 292 AGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPTPPGTASNP 351
Query: 290 SAPTTPQPNSTAP 302
P QP P
Sbjct: 352 LPPPAAQPYQILP 364
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 52 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 107
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + S +
Sbjct: 108 ASAALAIMTLHGRQLYGQALKVNW------AYANSSREDTS----------------GHF 145
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
V+ G ++ + + FS + T D RV + KGY FV F + A AI
Sbjct: 146 NVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 205
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + ++C W + S+
Sbjct: 206 MTGKWLGNRQIRCNWATKGAGGSS 229
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 170/313 (54%), Gaps = 16/313 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 29 DASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 87
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DTS H+++FVGDLSPE+ TL F+ +
Sbjct: 88 IMTLHGRQLYGQALKVNWAYA--NSSREDTSGHFNVFVGDLSPEVTDATLFACFSVYTTC 145
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF +A++AI M G+WLG+R IR NW+T+ +NE
Sbjct: 146 SDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNE 205
Query: 183 RKRQNSHTKTITFD-------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPFG 231
K +S + + + N+ +P N TVY G D+ + + F G
Sbjct: 206 EKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHALG 265
Query: 232 TIV--DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
V ++RV KG+ FV++ T E A AI+ + + G T+KC WG + T + P
Sbjct: 266 AGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKPTPPGTASNP 325
Query: 290 SAPTTPQPNSTAP 302
P QP P
Sbjct: 326 LPPPAAQPYQILP 338
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 26 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 81
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + S +
Sbjct: 82 ASAALAIMTLHGRQLYGQALKVNW------AYANSSREDTS----------------GHF 119
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
V+ G ++ + + FS + T D RV + KGY FV F + A AI
Sbjct: 120 NVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 179
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + ++C W + S+
Sbjct: 180 MTGKWLGNRQIRCNWATKGAGGSS 203
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 165/282 (58%), Gaps = 15/282 (5%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
+YVGN+ V+VT++LL +F+ GP+ GCK+IR+ Y F+++ + AA A+ ++ R
Sbjct: 47 VYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKD-KSSYGFVDYHDQSSAALAIMTLHGR 105
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ +KVNWA GN ++DTS H+H+FVGDLSPE+ L F+ F SN R++
Sbjct: 106 QLYGQALKVNWAY--GNSQREDTSGHFHVFVGDLSPEVIDANLFACFSVFPSCSNARVMW 163
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D +T +SKGY FVSF + EA++AI + G+WLG+R IR NW+T+ + +++ N +
Sbjct: 164 DHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWATKGVESNEDKQNSDNQN 223
Query: 190 TKTIT------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GTIVDIR 237
+T E N+ +P N TVY G ++ + + + F G I D+R
Sbjct: 224 AVVLTNGSSEGGQESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVR 283
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
V ++KG+ FV++ T E A AI++ + + G VKC WG +
Sbjct: 284 VQRDKGFGFVRYNTHEEAASAIQTGNGKIVCGKPVKCSWGSK 325
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGNDPYAFLEFVHHTVAATALAA 65
TT+YVGNL VT+ L F +G ++ +V R+ G + F+ + H AA+A+
Sbjct: 251 TTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDKG---FGFVRYNTHEEAASAIQT 307
Query: 66 MNKRVFLEKEMKVNWASSP 84
N ++ K +K +W S P
Sbjct: 308 GNGKIVCGKPVKCSWGSKP 326
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 195/398 (48%), Gaps = 36/398 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-----YAFLEFVHHTVAATALA 64
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERAMQ 150
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF FG +S
Sbjct: 151 TLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGSVSE 210
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
R++ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 211 ARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 270
Query: 185 RQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
S T T +D + Q+ TVY G + + +F
Sbjct: 271 SMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQN 330
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES-------EN 282
FG +V+ R ++G+AFVK T E A AI + ++NG +KC WGK+ E
Sbjct: 331 FGYVVETRFQSDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPSQPGFEG 390
Query: 283 NSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYP 342
T P + TP P P Y Q G PQ +A Q QYG G P
Sbjct: 391 TPTGYSPQSAQTP----AYPGTPSAYFPQYGGMPPQQGPPSAGPMPNQQSQAQYG--GQP 444
Query: 343 QGYVGMVGRQVPGWQGIP---GAQPTAQQMAVAQAQPS 377
Y G + G+ G P G P+A AQ P+
Sbjct: 445 GNYGGPPQQSPAGYGGQPMGYGGPPSAGGYGRAQQTPT 482
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 177/325 (54%), Gaps = 24/325 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V+ K+I + + Y F+EF A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA + K+DTS+H+HIFVGDLS E+ + L +AF+ F
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAF 206
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++A+AE A+ AM+G+WLGSR+IR NW+ +K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE--- 281
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 386
Query: 282 --NNSTLAQPSAPTTPQPNSTAPQF 304
+N + QP++P P + PQ+
Sbjct: 387 QFDNFSGQQPNSPFNSNPATYFPQY 411
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRER 234
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL AM+ + ++ NWA+ G QP H+H
Sbjct: 235 ADAEKALNAMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHG 293
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R+ D +G+A
Sbjct: 294 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFA 347
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 348 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 384
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 176/335 (52%), Gaps = 26/335 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 66 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 125
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTS H+HIFVGDLS E+ + L +AF+ FG
Sbjct: 126 AMQTLNGRRVHQSEIRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSAFGS 185
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 245
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T F D + Q+ TVY G V +
Sbjct: 246 QQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPL 305
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A+ AI ++ ++NG +KC WGK+ +N
Sbjct: 306 FQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTSNQGF 365
Query: 287 AQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAA 321
P+ P +PQ ++ P F G +YPQ A
Sbjct: 366 -DPAQPYSPQ-SAQGPGF-------QGSYYPQYGA 391
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 79/215 (36%), Gaps = 52/215 (24%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 155 DTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRDR 211
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYH----- 97
A AL++M+ + ++ NWA+ G QP H+
Sbjct: 212 PEAEKALSSMDGEWLGSRAIRCNWANQKG-QPSMAQQQAMQAMGLTPTTPFGHHQFPTHG 270
Query: 98 -----------------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
++VG+L+P + F FG + R D +G+A
Sbjct: 271 VGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFA 324
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F+ A AI MNG + R ++ +W K
Sbjct: 325 FIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDK 359
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 177/325 (54%), Gaps = 24/325 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V+ K+I + + Y F+EF A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA + K+DTS+H+HIFVGDLS E+ + L +AF+ F
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSAF 206
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++A+AE A+ AM+G+WLGSR+IR NW+ +K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE--- 281
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 386
Query: 282 --NNSTLAQPSAPTTPQPNSTAPQF 304
+N + QP++P P + PQ+
Sbjct: 387 QFDNFSGQQPNSPFNSSPATYFPQY 411
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRER 234
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL AM+ + ++ NWA+ G QP H+H
Sbjct: 235 ADAEKALNAMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHG 293
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R+ D +G+A
Sbjct: 294 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFA 347
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 348 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 384
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 172/302 (56%), Gaps = 15/302 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VTE+LL +F GP+ GCK+IR+ Y F+++ + AA A
Sbjct: 34 DSSACRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKD-KSSYGFVDYHDRSCAAVA 92
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DTS H+HIFVGDLSPE+ TL F+ +
Sbjct: 93 IMTLHGRQLYGQALKVNWAYA--NSQREDTSGHFHIFVGDLSPEVTDATLFACFSVYNSC 150
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF + EA++AI ++G+WLG+R IR NW+T+ + ++
Sbjct: 151 SDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKWLGNRQIRCNWATKGSASNEDK 210
Query: 183 RKRQNSHTKTITF------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPFGT 232
+ N + +T E N+ +P N TVY G ++ + + F G
Sbjct: 211 QIGDNQNAVILTSGSSEGGQENANEDAPENNPAYTTVYVGNLCHEVTQSELHCQFHTLGA 270
Query: 233 --IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
I ++RV ++KG+ FV++TT E A AI+ + + G +KC WG + T + P
Sbjct: 271 GIIEEVRVQRDKGFGFVRYTTHEEAASAIQMANGKIVRGKPMKCSWGSKPTPPGTASNPL 330
Query: 291 AP 292
P
Sbjct: 331 PP 332
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 31 PGFDSSACRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKS----SYGFVDYHDR 86
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI ++G+ L ++++ NW A N ++ S +
Sbjct: 87 SCAAVAIMTLHGRQLYGQALKVNW------AYANSQREDTS----------------GHF 124
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + KGY FV F + A AI
Sbjct: 125 HIFVGDLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAIND 184
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 185 LSGKWLGNRQIRCNW 199
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 192/370 (51%), Gaps = 28/370 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LY+G LD VTE++L +F G V+ K+I + + Y F+E+ A A++ +N
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMSTLN 153
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 154 GRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 213
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP---------- 177
+ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 214 MWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 273
Query: 178 --AMTNERKRQNSHTKTI---TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
MT + H T ++D V Q+ T Y G + + +F FG
Sbjct: 274 AMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGY 333
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA--QPS 290
+V+ R ++G+AFVK T E A AI + ++NG +KC WG++ P
Sbjct: 334 VVETRFQTDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGRDRPPTGQFEGYSPQ 393
Query: 291 APTTPQPN-STAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG----Y 345
TP N ST+P FP Y+ G PQ A + A + + Q G + G
Sbjct: 394 QSGTPTFNSSTSPYFPQ-YSGPSGPMTPQGGAGPSPGA---RGWDQQGAANFGGGPGMPS 449
Query: 346 VGMVGRQVPG 355
G G+Q+PG
Sbjct: 450 AGGYGQQLPG 459
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 173/321 (53%), Gaps = 19/321 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + + Y F+E+ A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 148 AMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 207
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 182 ERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+++ + T T +D V Q+ T Y G + + +
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 327
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQF 387
Query: 287 A-QPSAPTTPQPNS-TAPQFP 305
P P NS T+P FP
Sbjct: 388 DYSPQQGANPGFNSGTSPYFP 408
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 172/319 (53%), Gaps = 21/319 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + + Y F+E+ A
Sbjct: 85 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAER 144
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 145 AMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 204
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+S R++ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K +
Sbjct: 205 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 182 ERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+++ ++ T T +D + Q+ TVY G + + +
Sbjct: 265 QQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPL 324
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AFVK T E A AI + ++NG +KC WGK+
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD----KAP 380
Query: 287 AQPSAPTTPQPNSTAPQFP 305
QP A + P S A Q P
Sbjct: 381 GQPGADGSQAPWSPAVQTP 399
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 186/362 (51%), Gaps = 30/362 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTVAATALA 64
LYVG LD VTE++L +F G V K+I + Y F+EF A A+
Sbjct: 92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQ 151
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 152 TLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 211
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
R++ D +T +S+GY FV+F ++A+AE A+T+M+G+WLGSR+IR NW+ +K ++++
Sbjct: 212 ARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSISQQQ 271
Query: 185 RQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
+ T T +D V Q+ T Y G + + +F
Sbjct: 272 AMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQN 331
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE-----NNS 284
FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+ +N
Sbjct: 332 FGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKDRPPTGQFDNF 391
Query: 285 TLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQ-YGQLGYPQ 343
Q ++P P P FP Y G PQ A + PQ Q +GQ+
Sbjct: 392 PGQQANSPFASSP---GPYFPQ-YGGPGGPMTPQGPAQAGRGWEQPQMAQQGFGQVPGNT 447
Query: 344 GY 345
GY
Sbjct: 448 GY 449
>gi|312378986|gb|EFR25405.1| hypothetical protein AND_09265 [Anopheles darlingi]
Length = 594
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/322 (46%), Positives = 179/322 (55%), Gaps = 76/322 (23%)
Query: 95 HYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI 154
HYHIF+GDLSPEIETQTLKEAFAPFG+IS P K G A +
Sbjct: 313 HYHIFIGDLSPEIETQTLKEAFAPFGDIS-------PLPQKGGGLAKM------------ 353
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
W +TN+ + K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 354 ----------------WVFDTDYLVTND-----INAKPLTFDEVYNQSSPTNCTVYCGGI 392
Query: 215 GKD----LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
G LNE+++ K F PFGTI +IRVFK+KGYAFV+F+TKE ATHAI ++HN++IN
Sbjct: 393 GGTLAGGLNEDILQKTFLPFGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVHNSEINSQ 452
Query: 271 TVKCFWGKES---ENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQM-GYW----YPQAAAY 322
TVKC WGKES N +LA + T P +TA Y QQ+ GYW AA
Sbjct: 453 TVKCSWGKESGDPNNAPSLASQALSQTGFPFNTA------YGQQVAGYWYPPAPAYPAAP 506
Query: 323 TATAAQLPQQF------YQYGQL-GYPQGYVGMVGRQVPG-WQGIPG-AQ--PTAQQMAV 371
A L QF Y YGQ GY QGY+GM G Q+PG W +P AQ TAQQ+A
Sbjct: 507 APAATPLQGQFLQGMQGYTYGQFAGYQQGYMGM-GMQIPGAWPTVPTQAQLPTTAQQIAT 565
Query: 372 AQA------QPSMMAAYAMQQF 387
AQ Q + + AY MQQF
Sbjct: 566 AQGVGGALPQTAGVVAYPMQQF 587
>gi|62088100|dbj|BAD92497.1| TIA1 cytotoxic granule-associated RNA-binding protein-like 1
isoform 2 variant [Homo sapiens]
Length = 183
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 4 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPA---PK 60
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKG
Sbjct: 61 STQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG 120
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
Y+FV+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 121 YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 157
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------- 97
Y F+ F + A A+ M + ++++ NWA+ PK N+
Sbjct: 19 YGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 78
Query: 98 -------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 79 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 132
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 133 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 163
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 71 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ L +AF+ FG
Sbjct: 131 AMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGS 190
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 250
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T F + + Q+ T Y G V +
Sbjct: 251 QQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPL 310
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +++ R ++G+AF+K + E A AI ++ ++NG +KC WGK+ NS
Sbjct: 311 FQNFGFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKAPNSGS 370
Query: 287 AQPSAPTTPQPNSTAPQFP 305
P P +PQ S AP FP
Sbjct: 371 FDPQQPYSPQ-TSQAPGFP 388
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 182/365 (49%), Gaps = 27/365 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 73 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 132
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ L +AF+ FG
Sbjct: 133 AMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGS 192
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 252
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T F + + Q+ T Y G V +
Sbjct: 253 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPL 312
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ NS
Sbjct: 313 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNSGS 372
Query: 287 AQP-SAPTTPQPNSTAPQFPYIYNQQMGYWYPQ-AAAYTATAAQL--PQQFYQYGQLGYP 342
P P +PQ S AP FP +YPQ A Y PQ G G P
Sbjct: 373 FDPQQQPYSPQ-TSQAPGFPGTPT-----YYPQYGAQYNGQQGNFGGPQAGSPAGYSGSP 426
Query: 343 QGYVG 347
GY G
Sbjct: 427 MGYGG 431
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 172/323 (53%), Gaps = 21/323 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 148 ERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 207
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
+F FG +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 328 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 387
Query: 285 TLA-QPSAPTTPQPNS-TAPQFP 305
P P NS T+P FP
Sbjct: 388 QFDYSPQQGANPAFNSGTSPYFP 410
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 199/386 (51%), Gaps = 24/386 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F+ GP+ GCK+IR+ Y F+++ + AA A
Sbjct: 31 DSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKD-KSSYGFVDYHDRSSAALA 89
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + G ++DTS H+HIFVGDLSPE+ TL F+ F
Sbjct: 90 IMTLHGRQLYGEALKVNWAYASGQ--REDTSGHFHIFVGDLSPEVTDATLYACFSVFPSC 147
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF + EA++AI + G+WLG+R IR NW+T+ + ++
Sbjct: 148 SDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCNWATKGVGSNEDK 207
Query: 183 RKRQNSHTKTIT------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF-- 230
+ N + +T E N+ +P N TVY G + + + F
Sbjct: 208 QNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTVYVGNLSHVVTQAELHGNFHALGA 267
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G I ++RV ++KG+ FV++ T E A AI+ + + G +KC WG + T + P
Sbjct: 268 GVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGNGKIVCGKPMKCSWGSKPTPPGTASNP- 326
Query: 291 APTTPQPNSTAPQF----PYIYNQQMGYWYPQAAAYTATAAQLPQQFYQY-GQLGYPQGY 345
P QP AP Y + Y A + A + Q Q GQ G
Sbjct: 327 LPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAAASGLSGQALVQLTGQHGLSAAS 386
Query: 346 VGM--VGRQVPGWQGIPGAQPTAQQM 369
+G+ G Q + G P + AQQ+
Sbjct: 387 MGLSSSGSQAL-YDGYPNSLAAAQQL 411
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ + + L E FA G ++ C+++R ++ Y FV + +
Sbjct: 28 PGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKS----SYGFVDYHDR 83
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI ++G+ L +++ NW+ + +R+ + H
Sbjct: 84 SSAALAIMTLHGRQLYGEALKVNWAY-----ASGQREDTSGHFH---------------- 122
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + KGY FV F ++ A AI
Sbjct: 123 -IFVGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAIND 181
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 182 LTGKWLGNRQIRCNW 196
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 172/304 (56%), Gaps = 19/304 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VTE+LL +F GP+ GCK+IR+ Y F++++ A+ A
Sbjct: 53 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKD-KSSYGFVDYLDRASASLA 111
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 112 IMTLHGRQVYGQALKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLYACFSVFASC 169
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF + +A++AI ++G+WLG+R IR NW+T+ A NE
Sbjct: 170 SDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKG--AGFNE 227
Query: 183 RKRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF 230
K+ N + + E N+ +P N TVY G ++ + + F
Sbjct: 228 DKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHAL 287
Query: 231 --GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
G I ++R+ ++KG+ FV++ T E A AI+ + + G ++KC WG + T +
Sbjct: 288 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASN 347
Query: 289 PSAP 292
P P
Sbjct: 348 PLPP 351
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ + + L E F G ++ C+++R ++ Y FV ++ +
Sbjct: 50 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKS----SYGFVDYLDR 105
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ + ++++ NW+ + +R+ + H +N
Sbjct: 106 ASASLAIMTLHGRQVYGQALKVNWAY-----ASGQREDTSGH---------FN------- 144
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + KGY FV F ++ A AI
Sbjct: 145 -IFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAIND 203
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 204 LSGKWLGNRQIRCNW 218
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 187/370 (50%), Gaps = 23/370 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAATALAAMN 67
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+ +N
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQNLN 148
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA K+DTS H+HIFVGDLS E+ + L +AF FG +S R+
Sbjct: 149 GRRVHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSEARV 208
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNERKRQ 186
+ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P+M ++ Q
Sbjct: 209 MWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQALQ 268
Query: 187 NSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
T ++ V NQ+ T Y G + + +F FG
Sbjct: 269 QVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGY 328
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
+V+ R ++G+AF+K + E A AI ++ ++NG +KC WGK+ N+ PS
Sbjct: 329 VVESRFQSDRGFAFIKLDSHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNAQGFDPSQQ 388
Query: 293 TTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQ 352
+ P S Q P Y ++PQ A QQ YG Q VG G+
Sbjct: 389 SYGSPQSA--QAPGPYPGSPTTYFPQYGAQYGNG----QQSGNYGGPPTAQSPVGYGGQA 442
Query: 353 VPGWQGIPGA 362
G+ G G+
Sbjct: 443 PMGYSGQHGS 452
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 177/344 (51%), Gaps = 22/344 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG LD VT+++L +F G V K+I + Y F+E+ A
Sbjct: 74 EPNKRALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAKGFNYGFVEYDDPGAAER 133
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTS+H+HIFVGDLS E+ + L++AF FG
Sbjct: 134 AMQTLNGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAFTTFGT 193
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
IS R++ D +T +S+GY FV++ ++++AE A++AM+G+WLGSR+IR NW+ +K P
Sbjct: 194 ISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQKGQPSIS 253
Query: 180 TNERKRQNSHTKTITF-------------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ Q T T F D + Q+ TVY G + + +
Sbjct: 254 QQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPL 313
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG IV+ R ++G+AF+K T E A AI + ++NG +KC WGK+
Sbjct: 314 FQNFGYIVETRFQADRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQF 373
Query: 287 AQPS---APTTPQ-PNSTAPQFPYIYNQQMGYWYPQAAAYTATA 326
S P TPQ PNS FP Y G PQ +A+A
Sbjct: 374 DGYSPQGGPQTPQFPNSPFSNFPQ-YGGPGGPMSPQGGPNSASA 416
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 50/216 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +ELL F+ G + +V+ R G Y F+ +
Sbjct: 163 DTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRG---YGFVAYRER 219
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-------------NHYH------ 97
+ A AL+AM+ + ++ NWA+ G S H+H
Sbjct: 220 SDAEKALSAMDGEWLGSRAIRCNWANQKGQPSISQQSQMAQMGMTPTTPFGHHHFPTHGI 279
Query: 98 ----------------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
++VG+L+P L F FG I R D +G+AF
Sbjct: 280 QSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQAD------RGFAF 333
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
+ A AI ++G + R ++ +W +PP
Sbjct: 334 IKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPP 369
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 163/295 (55%), Gaps = 19/295 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 148 ERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 207
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 328 PLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAE 151
N ++VG L P + L++ F G + + +I+ D + +SKG Y FV + AE
Sbjct: 90 NKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAE 148
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYC 211
A+ +NG+ + IR NW+ + N+ K T + + ++
Sbjct: 149 RAMQTLNGRRVHQSEIRVNWAYQS-----------NNANKEDTSNHFH---------IFV 188
Query: 212 GGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNT 265
G ++N+E++ + FS FG++ + RV + +GY FV F + A A+ S+
Sbjct: 189 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGE 248
Query: 266 DINGHTVKCFWGKE------SENNSTLAQPSAPTTP 295
+ ++C W + S+ + A PTTP
Sbjct: 249 WLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTP 284
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRER 235
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL++M+ + ++ NWA+ G QP H+H
Sbjct: 236 ADAEKALSSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHG 294
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R D +G+A
Sbjct: 295 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFA 348
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FV A AI +NG + R ++ +W +PP
Sbjct: 349 FVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 385
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 172/304 (56%), Gaps = 19/304 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VTE+LL +F GP+ GCK+IR+ Y F++++ A+ A
Sbjct: 14 DSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKD-KSSYGFVDYLDRASASLA 72
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 73 IMTLHGRQVYGQALKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLYACFSVFASC 130
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF + +A++AI ++G+WLG+R IR NW+T+ A NE
Sbjct: 131 SDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKG--AGFNE 188
Query: 183 RKRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF 230
K+ N + + E N+ +P N TVY G ++ + + F
Sbjct: 189 DKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHAL 248
Query: 231 --GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
G I ++R+ ++KG+ FV++ T E A AI+ + + G ++KC WG + T +
Sbjct: 249 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASN 308
Query: 289 PSAP 292
P P
Sbjct: 309 PLPP 312
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ + + L E F G ++ C+++R ++ Y FV ++ +
Sbjct: 11 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKS----SYGFVDYLDR 66
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ + ++++ NW+ + +R+ + H +N
Sbjct: 67 ASASLAIMTLHGRQVYGQALKVNWAY-----ASGQREDTSGH---------FN------- 105
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + KGY FV F ++ A AI
Sbjct: 106 -IFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAIND 164
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 165 LSGKWLGNRQIRCNW 179
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 181/336 (53%), Gaps = 25/336 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LYVG LD VTE++L +F G V+ K+I + + Y F+E+ A A+A +N
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLN 161
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 162 GRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 221
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
+ D +T +S+GY FV+F ++++AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 222 MWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 281
Query: 188 SHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ T T +D V Q+ T Y G + + +F FG
Sbjct: 282 AMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGY 341
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES------ENNSTL 286
+V+ R ++G+AFVK T E A AI + ++NG +KC WGK+ E S
Sbjct: 342 VVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQFEGYSPQ 401
Query: 287 AQPSAPTTPQPNS-TAPQFPYIYNQQMGYWYPQAAA 321
Q TP NS T+P FP Y+ G PQ A
Sbjct: 402 QQQQQAGTPTFNSNTSPYFPQ-YSGPSGPMTPQGGA 436
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 189/380 (49%), Gaps = 39/380 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEYDDPGAAERAMQT 142
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R ++E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 143 LNGRRVHQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEA 202
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNER 183
R++ D +T +S+GY F +F + EAE A+++M+G+WLGSR+IR NW+ +K P +
Sbjct: 203 RVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA 262
Query: 184 KRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
Q T T +++ + Q+ TVY G + + +F F
Sbjct: 263 MAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNF 322
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES------ENNS 284
G + + R ++G+AF+K T E A +AI + +NG +KC WGK+ + S
Sbjct: 323 GYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPTGQFDGFS 382
Query: 285 TLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
AQ P S PQ + QQ G PQ A P F Q G+ Q
Sbjct: 383 PAAQTPGSAFP---SATPQAFFPQYQQPGAMSPQGAT--------PAGFQQASPAGWQQ- 430
Query: 345 YVGMVGRQV-PGWQGIPGAQ 363
GM + PG QG PGAQ
Sbjct: 431 -PGMAPSALHPGAQGWPGAQ 449
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 162/320 (50%), Gaps = 54/320 (16%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VTE +L +F+ GPV+ K+I + G Y F+E+ A TAL
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQT 73
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA G Q K+DTS HYH+FVGDLSPE+ + L +AFA F +S+
Sbjct: 74 LNGRKIFDTEIRVNWAYQ-GQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDA 132
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR----------- 174
R++ D + KS+GY F++F K +AE AI MNG+WLGSR+IR NW+ +
Sbjct: 133 RVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPGNGGM 192
Query: 175 -----------------------------------KPPAMTNERKRQNSHTKTITFDEVY 199
+P M Q T +++++V
Sbjct: 193 PGIGGGMGMGGGMPTGMPMGMPMGGMPAMSPMGAARPMGMPQPVSFQ---TAPVSYEQVL 249
Query: 200 NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAI 259
QS TN TVY G + + +F G + +IR+ ++G+AFVK T E A AI
Sbjct: 250 TQSPATNSTVYVGNLVPFATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAATAI 309
Query: 260 ESIHNTDINGHTVKCFWGKE 279
S+ I+G +K WGK+
Sbjct: 310 VSLQGQMIHGRPIKVSWGKD 329
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG-- 138
A SP P++ H++VG+LSP + L E FA G + + +I+ D + + G
Sbjct: 2 ALSPAQAPRRA-----HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPD-RNYQHGGLN 55
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEV 198
Y FV + AE A+ +NG+ + IR NW+ + +QN + +
Sbjct: 56 YGFVEYTDMRSAETALQTLNGRKIFDTEIRVNWAY---------QGQQNKEDTSGHYH-- 104
Query: 199 YNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTK 252
V+ G ++N+E+++K F+ F T+ D RV K +GY F+ F K
Sbjct: 105 ----------VFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDK 154
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKE 279
A AI +++ + ++ W +
Sbjct: 155 TDAEQAIATMNGEWLGSRAIRVNWANQ 181
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+T+YVGNL T+ L LF IG + ++ + G +AF++ H AATA+ ++
Sbjct: 257 STVYVGNLVPFATQADLIPLFQSIGYLSEIRMQADRG---FAFVKLDTHENAATAIVSLQ 313
Query: 68 KRVFLEKEMKVNWA 81
++ + +KV+W
Sbjct: 314 GQMIHGRPIKVSWG 327
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 140/225 (62%), Gaps = 17/225 (7%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 41 DARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PK 97
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
S+TK +++DEV +QSSP NCTVYCGG L E+L+ + FSPFG I++IRVF +KG
Sbjct: 98 STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG 157
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQ 303
Y+FV+F++ E+A HAI S++ T I GH VKC+WGKE+ + Q Q N
Sbjct: 158 YSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG-- 208
Query: 304 FPYIYNQQMGYWY---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
+P Y Q G WY Q Y Q+P + YGQ QG+
Sbjct: 209 YPPTYG-QWGQWYGNAQQIGQYVPNGWQVP-AYGVYGQPWSQQGF 251
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------Q 90
Y F+ F + A A+ M + ++++ NWA+ PK Q
Sbjct: 56 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQ 115
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ N+ ++ G ++ + Q +++ F+PFG+I R+ D KGY+FV F A
Sbjct: 116 SSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESA 169
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
+AI ++NG + ++ W ++ M N ++QN
Sbjct: 170 AHAIVSVNGTTIEGHVVKCYWG-KETLDMINPVQQQN 205
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+Y G + +TE+L+ FS G + +V + G Y+F+ F H AA A+ ++N
Sbjct: 122 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFSSHESAAHAIVSVNG 178
Query: 69 RVFLEKEMKVNWA 81
+K W
Sbjct: 179 TTIEGHVVKCYWG 191
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 186/365 (50%), Gaps = 27/365 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 80 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 140 AMQTLNGRRVHQSEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 199
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 259
Query: 180 TNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ + T T +++ + Q+ T Y G V +
Sbjct: 260 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTCYVGNLTPYTTPNDVVPL 319
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ N+
Sbjct: 320 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 379
Query: 287 A-QPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQ-AAAYTATAAQL--PQQFYQYGQLGYP 342
P+ P +PQ ++ AP +P +YPQ A Y PQ G G P
Sbjct: 380 GFDPAQPYSPQ-SAQAPGYPGTPT-----FYPQYGAQYGGQPGNYGGPQTGSPAGYGGSP 433
Query: 343 QGYVG 347
GY G
Sbjct: 434 MGYAG 438
>gi|194379766|dbj|BAG58235.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 116/157 (73%), Gaps = 3/157 (1%)
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 2 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PK 58
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG 243
Q ++TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKG
Sbjct: 59 STQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG 118
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
Y+FV+F+T E+A H I S++ T I GH VKC+WGKES
Sbjct: 119 YSFVRFSTHESAAHVIVSVNGTTIEGHVVKCYWGKES 155
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------- 97
Y F+ F + A A+ M + ++++ NWA+ PK N+
Sbjct: 17 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQ 76
Query: 98 -------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 77 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 130
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ I ++NG + ++ W P N
Sbjct: 131 AHVIVSVNGTTIEGHVVKCYWGKESPDMTKN 161
>gi|294884878|gb|ADF47447.1| TIA1-like protein [Dugesia japonica]
Length = 323
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 18/292 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
T+YVGNL +V ++LL +F G C +IR+ +PYAF+E+ H+ A+ AL+AM
Sbjct: 8 TIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAM 67
Query: 67 NKRVFLEKEMKVNWASSPGNQP--------KQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
+ ++KVNW+S P P K D SN IFVGD+ +++ LKE F+
Sbjct: 68 DGIYMWNNQIKVNWSSGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQ 127
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG++ + ++VR P +S+G+AFVSF + EAE AI +M+ W +R+I+ NW+TR
Sbjct: 128 FGQLIDAKVVRYPDG-QSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRN--G 184
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ E Q ++ VY ++ TN VY G ++L EEL++ F FG I ++V
Sbjct: 185 LDGE---QFIKYTPRPYELVYKEAPLTNTNVYVAG--ENLTEELLNCHFQEFGRIDSVKV 239
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ EKG+AF+ F T E A AI H IN + +KC WGKE+ ST P+
Sbjct: 240 YPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFGISTATIPA 291
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 26/193 (13%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N+ I+VG+L + Q L F FG+ +C I+RD + ++ YAF+ + + A A
Sbjct: 5 NNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRD-FSCQTNPYAFIEYTDHSSASLA 63
Query: 154 ITAMNGQWLGSRSIRTNWSTRKP----PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
++AM+G ++ + I+ NWS+ PA K S++ +
Sbjct: 64 LSAMDGIYMWNNQIKVNWSSGPSAVPGPAAVASAKIDYSNS----------------VQI 107
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFK-----EKGYAFVKFTTKETATHAIESIHN 264
+ G G D++E ++ + FS FG ++D +V + +G+AFV F+ ++ A AI+S+H
Sbjct: 108 FVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHK 167
Query: 265 TDINGHTVKCFWG 277
T + T+KC W
Sbjct: 168 TWFHNRTIKCNWA 180
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAA 60
D S ++VG++ + V E +L FSQ G + KV+R P +AF+ F + A
Sbjct: 100 DYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAE 159
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQ-----------------DTSNHYHIFVGDL 103
A+ +M+K F + +K NWA+ G +Q T+ + ++ +L
Sbjct: 160 RAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAGENL 219
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ E+ L F FG I + ++ + KG+AF++FV A AI+ +G +
Sbjct: 220 TEEL----LNCHFQEFGRIDSVKVYPE------KGHAFINFVTHEAAARAISQRHGYKIN 269
Query: 164 SRSIRTNW 171
I+ NW
Sbjct: 270 DNVIKCNW 277
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETAT 256
S N T+Y G +N++L+ ++F FG + + ++ YAF+++T +A+
Sbjct: 2 SFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSAS 61
Query: 257 HAIESIHNTDINGHTVKCFW 276
A+ ++ + + +K W
Sbjct: 62 LALSAMDGIYMWNNQIKVNW 81
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 160/280 (57%), Gaps = 20/280 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
+++V L SV E LL +FS +G V CK++++ + Y F+EF+ HT A A M
Sbjct: 40 SVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDKTGTHARYGFIEFIDHTTAEFAKENM 99
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N R+ KE+KVNW + + D + +FVG L E+ + L + FA FG +S+ R
Sbjct: 100 NGRLVYGKELKVNWT----HDSQSDAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDAR 155
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTNERKR 185
++R Q+ KS+GY FV+F++K +AE A+ MNG+ + R+++ NW T + P T +R
Sbjct: 156 VLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKR-- 213
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK---EK 242
FDE+ ++S TN VY GG K+ E + K+F FG I+D+++ + EK
Sbjct: 214 --------GFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDAEK 265
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
Y FV+F + + AT AI ++ +NG + C WGKES N
Sbjct: 266 AYGFVRFVSHDNATKAIMMLNGYQLNGGCLNCMWGKESFN 305
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 172/329 (52%), Gaps = 26/329 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP--------YAFLEFV 54
E LYVG LD VTE++L +F G V+ K+I + + P Y F+E+
Sbjct: 79 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYD 138
Query: 55 HHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A +A +N R E++VNWA N K+DTSNH+HIFVGDLS E+ + L +
Sbjct: 139 DPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQ 198
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+ FG +S R++ D +T +S+GY FV+F +A+A+ A+++M+G+WLGSR+IR NW+ +
Sbjct: 199 AFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQ 258
Query: 175 KPPAMTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLN 219
K ++++ S T T +D V +Q+ T Y G +
Sbjct: 259 KGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTS 318
Query: 220 EELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ + +F FG + + R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 319 QSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 280 SENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
S PNS PQ P Y
Sbjct: 379 RPPTGQFEGYSPAGG--PNSAYPQTPSAY 405
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS GPV +V+ R G Y F+ F
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRG---YGFVAFRDR 231
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL++M+ + ++ NWA+ G QP H+H
Sbjct: 232 ADADRALSSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMASMGMTPTTPFGHHHFPTHG 290
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG ++ R D +G+A
Sbjct: 291 VQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFA 344
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 345 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 381
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 168/303 (55%), Gaps = 16/303 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 50 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 108
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 109 IMTLHGRQLYGQALKVNWAYA--NSSREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 166
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF +A++AI M G+WLG+R IR NW+T+ +NE
Sbjct: 167 SDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNE 226
Query: 183 RKRQNSHTKTITFD-------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF- 230
K +S + + + N+ +P N TVY G D+ + + F
Sbjct: 227 EKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTVYVGNLPHDVTQAELHCQFHALG 286
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
G I ++RV ++KG+ FV++ T + A AI+ + + G +KC WG + T + P
Sbjct: 287 AGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPTPPGTASNP 346
Query: 290 SAP 292
P
Sbjct: 347 LPP 349
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 47 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 102
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + S +
Sbjct: 103 ASAALAIMTLHGRQLYGQALKVNW------AYANSSREDTS----------------GHF 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + KGY FV F + A AI
Sbjct: 141 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 200
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + ++C W + S+
Sbjct: 201 MTGKWLGNRQIRCNWATKGAGGSS 224
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 188/357 (52%), Gaps = 33/357 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+ +N
Sbjct: 89 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADRAMQTLN 148
Query: 68 KRVFLEKEMKVNWASSPGNQP-KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R
Sbjct: 149 GRRVHQSEIRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEAR 208
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNERKR 185
++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P++ ++
Sbjct: 209 VMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAM 268
Query: 186 Q-----------NSHTKTI---TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
Q + H T +++ V NQ+ T Y G + +F FG
Sbjct: 269 QAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQNFG 328
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA--QP 289
+V+ R ++G+AF+K T E AT AI +++ ++NG +KC WGK+ S P
Sbjct: 329 YVVESRFQSDRGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWGKDKNTASPQVGFDP 388
Query: 290 SAPT-TPQ------------PNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQF 333
S + TPQ P+S PQ+ ++ Q G + P A Q P F
Sbjct: 389 SQGSFTPQSGQGPASGFPGTPSSFFPQYGGQFSGQQGNFGPNQGQSPAGYPQQPMAF 445
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N ++VG L + L++ F G + N +I+ D + K Y FV + A+ A
Sbjct: 85 NKRALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRA 143
Query: 154 ITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGG 213
+ +NG+ + IR NW+ + T E + H ++ G
Sbjct: 144 MQTLNGRRVHQSEIRVNWAYQSANTTTKEDTSNHFH-------------------IFVGD 184
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDI 267
++N+E++++ FS FG++ + RV + +GY FV F + A A+ S+ +
Sbjct: 185 LSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWL 244
Query: 268 NGHTVKCFWGKESENNSTLAQPSA-------PTTP 295
++C W + + ++AQ A PTTP
Sbjct: 245 GSRAIRCNWANQ-KGQPSIAQQQAMQAMGMTPTTP 278
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 179/322 (55%), Gaps = 28/322 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 72 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRSAALA 130
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDL PE+ L F+ +
Sbjct: 131 IVSLNGRQLFGQPIKVNWAYA--STQREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTC 188
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI +NG+WLG+R IR NW+T+ A
Sbjct: 189 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIRCNWATKGANA---G 245
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QN+ +K + E+ N SS P TVY G D+N V + F
Sbjct: 246 EEKQNTDSKGMV--ELINGSSEAGKENANEDGPENNPQYTTVYVGNLPHDINSNDVHRFF 303
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
G+I ++RV ++KG+ FV+++T E A AI++ + + G +KC WG + T
Sbjct: 304 HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLVGGRQIKCSWGSKPTPPGT 363
Query: 286 LAQPSAPTTPQPNSTAPQFPYI 307
SAP P + AP P +
Sbjct: 364 ---ASAPLPPPALAVAPYTPGV 382
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L E F G + C+++R ++ + FV + +
Sbjct: 69 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS----SFGFVDYYDR 124
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H
Sbjct: 125 RSAALAIVSLNGRQLFGQPIKVNWAY-----ASTQREDTSGH-----------------F 162
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 163 NIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 222
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 223 LNGKWLGNRQIRCNWATKGAN 243
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 172/329 (52%), Gaps = 27/329 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-NDP--------YAFLEFV 54
E LYVG LD VTE++L +F G V+ K+I + + P Y F+E+
Sbjct: 82 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYD 141
Query: 55 HHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A +A +N R E++VNWA N K+DTSNH+HIFVGDLS E+ + L +
Sbjct: 142 DPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQ 201
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+ FG +S R++ D +T +S+GY FV+F +A+AE A+++M+G+WLGSR+IR NW+ +
Sbjct: 202 AFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWLGSRAIRCNWANQ 261
Query: 175 KPPAMTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLN 219
K ++++ S T T +D V Q+ T Y G +
Sbjct: 262 KGQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTS 321
Query: 220 EELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ + +F FG + + R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 322 QSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 280 SENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
Q + PNS PQ P Y
Sbjct: 382 ---RPPTGQFEGYSPAGPNSAYPQTPSAY 407
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS GPV +V+ R G Y F+ F
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRG---YGFVAFRDR 234
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL++M+ + ++ NWA+ G QP H+H
Sbjct: 235 ADAERALSSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMASMGMTPTTPFGHHHFPTQG 293
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG ++ R D +G+A
Sbjct: 294 VQSYDMVVAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFA 347
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 348 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 384
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 186/363 (51%), Gaps = 25/363 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 84 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGSAER 143
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 144 AMQTLNGRRVHQAEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 203
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------ 175
+S R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 263
Query: 176 ------PPAMTNERKRQNSHTKT---ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
MT + H T ++D + NQ+ T Y G + + +
Sbjct: 264 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVPL 323
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC + +
Sbjct: 324 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSTPQAQQAQFDP 383
Query: 287 AQPSAPTTPQPNSTAPQFPYIY-NQQMGYWYP-QAAAYTATAAQLPQQFYQYGQLGYPQG 344
Q +P + Q P P Y NQ G + P Q AAYT AQ P + G P G
Sbjct: 384 NQAYSPQSAQ-TPAYPGTPSTYFNQYGGNFGPGQQAAYTGAQAQSPAAY-----GGGPMG 437
Query: 345 YVG 347
Y G
Sbjct: 438 YSG 440
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 189/375 (50%), Gaps = 42/375 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LY+G LD VTEE+L +F G V+ K+I + Y F+E+ A
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 62 ALAAMNKRVFLE-----------KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
A+ +N R + KE++VNWA K+DTSNH+HIFVGDLS E+ +
Sbjct: 138 AMQTLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDE 197
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L +AF+ FG +S R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR N
Sbjct: 198 VLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCN 257
Query: 171 WSTRK--PPAMTNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFG 215
W+ +K P + + T T +++ + Q+ TVY G
Sbjct: 258 WANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLT 317
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
V +F FG +V+ R ++G+AF+K + E A AI ++ ++NG +KC
Sbjct: 318 PYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCS 377
Query: 276 WGKESENNSTLA-QPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFY 334
WGK+ N+ P P +PQ ++ AP FP GY YPQ AQ Q
Sbjct: 378 WGKDKTPNAQGGFDPVQPFSPQ-SAQAPGFP---GTPTGY-YPQ------YGAQYGGQPG 426
Query: 335 QYG--QLGYPQGYVG 347
YG Q G P GY G
Sbjct: 427 NYGGPQAGSPAGYAG 441
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 115/148 (77%), Gaps = 4/148 (2%)
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG IS+
Sbjct: 1 MNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 59
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R+V+D T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA +
Sbjct: 60 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA---PKST 116
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGG 213
S+TK +++DEV NQSSP+NCTVYCGG
Sbjct: 117 YESNTKQLSYDEVVNQSSPSNCTVYCGG 144
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
MNG+ + + ++ NW+T ++++K ++H V+ G
Sbjct: 1 MNGRKIMGKEVKVNWAT----TPSSQKKDTSNHFH-----------------VFVGDLSP 39
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDINGH 270
++ E + F+PFG I D RV K+ KGY FV F K A +AI+ + + G
Sbjct: 40 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGR 99
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQ 310
++ W +T P+ +T + N+ + + NQ
Sbjct: 100 QIRTNW-------ATRKPPAPKSTYESNTKQLSYDEVVNQ 132
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + A F+ G + +V+++ + Y F+ F + A
Sbjct: 25 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 84
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK 89
A+ M + ++++ NWA+ PK
Sbjct: 85 ENAIQQMGGQWLGGRQIRTNWATRKPPAPK 114
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 26/329 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP--------YAFLEFV 54
E LYVG LD VTE++L +F G V+ K+I + + P Y F+E+
Sbjct: 80 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYD 139
Query: 55 HHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A +A +N R E++VNWA N K+DTSNH+HIFVGDLS E+ + L +
Sbjct: 140 DPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQ 199
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+ FG +S R++ D +T +S+GY FV+F +A+AE A+ +M+G+WLGSR+IR NW+ +
Sbjct: 200 AFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQ 259
Query: 175 KPPAMTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLN 219
K ++++ S T T +D V Q+ T Y G +
Sbjct: 260 KGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTS 319
Query: 220 EELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ + +F FG + + R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 320 QADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 379
Query: 280 SENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
S PNS PQ P Y
Sbjct: 380 RPPTGQFEGYSPAGG--PNSAYPQTPSAY 406
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS GPV +V+ R G Y F+ F
Sbjct: 176 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRG---YGFVAFRDR 232
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL +M+ + ++ NWA+ G QP H+H
Sbjct: 233 ADAERALNSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMASMGMTPTTPFGHHHFPTHG 291
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG ++ R D +G+A
Sbjct: 292 VQSYDMVVAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFA 345
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 346 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 382
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 16/303 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 109
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DT+ H++IFVGDLSPE+ TL F+ +
Sbjct: 110 IMTLHGRQLYGQALKVNWAYA--NSSREDTTGHFNIFVGDLSPEVTDATLFACFSVYPSC 167
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF +A++AI M G+WLG+R IR NW+T+ +NE
Sbjct: 168 SDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNE 227
Query: 183 RKRQNSHTKTITFD-------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF- 230
K +S + + + N+ +P N TVY G D+ + + F
Sbjct: 228 EKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHALG 287
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
G I ++RV ++KG+ F+++ T + A AI+ + + G +KC WG + T + P
Sbjct: 288 AGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPTPPGTASNP 347
Query: 290 SAP 292
P
Sbjct: 348 LPP 350
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 103
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + + + +
Sbjct: 104 ASAALAIMTLHGRQLYGQALKVNW------AYANSSR----------------EDTTGHF 141
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + KGY FV F + A AI
Sbjct: 142 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 201
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + ++C W + S+
Sbjct: 202 MTGKWLGNRQIRCNWATKGAGGSS 225
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 16/303 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 51 DTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 109
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DT+ H++IFVGDLSPE+ TL F+ +
Sbjct: 110 IMTLHGRQLYGQALKVNWAYA--NSSREDTTGHFNIFVGDLSPEVTDATLFACFSVYPSC 167
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +SKGY FVSF +A++AI M G+WLG+R IR NW+T+ +NE
Sbjct: 168 SDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNE 227
Query: 183 RKRQNSHTKTITFD-------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF- 230
K +S + + + N+ +P N TVY G D+ + + F
Sbjct: 228 EKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHALG 287
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
G I ++RV ++KG+ F+++ T + A AI+ + + G +KC WG + T + P
Sbjct: 288 AGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKPTPPGTASNP 347
Query: 290 SAP 292
P
Sbjct: 348 LPP 350
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 103
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + + + +
Sbjct: 104 ASAALAIMTLHGRQLYGQALKVNW------AYANSSR----------------EDTTGHF 141
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + KGY FV F + A AI
Sbjct: 142 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 201
Query: 262 IHNTDINGHTVKCFWGKESENNST 285
+ + ++C W + S+
Sbjct: 202 MTGKWLGNRQIRCNWATKGAGGSS 225
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LYVG LD VTEE+L +F G V+ K+I + + Y F+E+ A A+ +N
Sbjct: 91 LYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAERAMQTLN 150
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 151 GRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 210
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
+ D +T +S+GY F +F ++ +AE A+++M+G+WLGSR+IR NW+ +K ++++ +
Sbjct: 211 MWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMS 270
Query: 188 SHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ T T +D + Q+ T Y G ++ + +F FG
Sbjct: 271 AMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGY 330
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
+V+ R ++G+AFVK + E A AI + ++NG +KC WGK+ S S
Sbjct: 331 VVETRFQADRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAGFDGSQQ 390
Query: 293 T-TPQPNSTA---PQFPYIYNQQMGYWYPQAAAYTA 324
+ +PQ T P P Y Q G PQA +A
Sbjct: 391 SYSPQAGPTPGGFPGTPNAYFPQYGGMPPQAGPQSA 426
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 26/323 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP--------YAFLEFVHHTVAA 60
LYVG LD VTE++L +F G V+ K+I + + P Y F+E+ A
Sbjct: 54 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 113
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
+A +N R E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 114 RGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFG 173
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+S R++ D +T +S+GY FV+F +A+AE A+ +M+G+WLGSR+IR NW+ +K
Sbjct: 174 PVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKGQPSI 233
Query: 181 NERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
++++ S T T +D V Q+ T Y G ++ +
Sbjct: 234 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADLVP 293
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
+F FG + + R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 294 LFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQ 353
Query: 286 LAQPSAPTTPQPNSTAPQFPYIY 308
S PNS PQ P Y
Sbjct: 354 FEGYSPAGG--PNSAYPQTPSAY 374
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS GPV +V+ R G Y F+ F
Sbjct: 144 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRG---YGFVAFRDR 200
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL +M+ + ++ NWA+ G QP H+H
Sbjct: 201 ADAERALNSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMASMGMTPTTPFGHHHFPTHG 259
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG ++ R D +G+A
Sbjct: 260 VQSYDMVVAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFA 313
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 314 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 350
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 178/313 (56%), Gaps = 33/313 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS IGP++GCK+IR+ Y F+++ AA +
Sbjct: 41 DSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKE-KSSYGFVDYFDRRSAAVS 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 100 IISLNGRNLFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FV+F + +A++AI +NG+WLGSR IR NW+T+ +
Sbjct: 158 SDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATK---GANSG 214
Query: 183 RKRQNSHTKTI------TFD---EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
+Q+S ++++ T D E N+ +P N TVY G ++ + + F
Sbjct: 215 DDKQSSDSRSVVELTSGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHA 274
Query: 230 FG--TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G TI D+RV ++KG+ FV+++T A AI++ + + G +KC WG
Sbjct: 275 LGAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGNARVVCGKPIKCSWG---------- 324
Query: 288 QPSAPTTPQPNST 300
S PT P NST
Sbjct: 325 --SKPTPPGTNST 335
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G I C+++R ++ Y FV + +
Sbjct: 38 PGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I ++NG+ L + I+ NW+ +++R+ + H +N
Sbjct: 94 RSAAVSIISLNGRNLFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +GY FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I+ + ++C W + N+ Q S
Sbjct: 192 INGKWLGSRQIRCNWATKGANSGDDKQSS 220
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 192/378 (50%), Gaps = 42/378 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG----NDPYAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V K+I + Y F+EF A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAA 146
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAF 206
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PA 178
G +S R++ D +T +S+GY FV+F +AEA+ A+ +M+G+WLGSR+IR NW+ +K P+
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 179 MTNERK-------------RQNSHTKTI-TFDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++ ++ + T I ++D V Q+ T Y G + +
Sbjct: 267 ISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
+F FG +++ R+ ++G+AFVK + E A AI ++ ++NG +KC WGK+
Sbjct: 327 PLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGKDRPPTG 386
Query: 285 TLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLG-YPQ 343
S PQ +TAP +N ++PQ Y A + Q G LG YP
Sbjct: 387 QFDNFS----PQQGNTAP-----FNGSPAGFFPQ---YGGPANPMNQ-----GGLGIYPT 429
Query: 344 GYVGMVGRQVP-----GW 356
+ GR P GW
Sbjct: 430 SQPSLTGRIGPAPAGRGW 447
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 175/327 (53%), Gaps = 28/327 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTV 58
E LYVG LD VTE++L +F G V K+I + Y F+EF
Sbjct: 86 EPNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 145
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
A A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L++AF+
Sbjct: 146 AERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSA 205
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG +S R++ D +T +S+GY FV+F +A+A+ A+ +M+G+WLGSR+IR NW+ +K
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQP 265
Query: 179 MTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
++++ + T T +D V Q+ T Y G + +
Sbjct: 266 SISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 325
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE-- 281
+F FG +++ R+ ++G+AF+K + E A AI ++ ++NG +KC WGK+
Sbjct: 326 VPLFQNFGYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKDRPPT 385
Query: 282 ---NNSTLAQPSAPTTPQPNSTAPQFP 305
+N + Q ++P NS AP FP
Sbjct: 386 GQFDNFSGQQGNSPFN---NSPAPYFP 409
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRDR 234
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL +M+ + ++ NWA+ G QP H+H
Sbjct: 235 ADADKALGSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTAFGHHHFPTHG 293
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R+ D +G+A
Sbjct: 294 IQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFA 347
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 348 FIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 384
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 20/296 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTV 58
E LYVG LD VTE++L +F G V K+I + Y F+EF
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
A A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+
Sbjct: 147 AERAMQTLNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSA 206
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG +S R++ D +T +S+GY FV+F ++++AE A+++M+G+WLGSR+IR NW+ +K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 179 MTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
++++ + T T +D V Q+ T Y G ++ +
Sbjct: 267 SISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDL 326
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +++ R+ ++G+AF+K + E A AI ++ ++NG +KC WGK+
Sbjct: 327 VPLFQNFGFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRER 235
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
+ A AL++M+ + ++ NWA+ G QP H+H
Sbjct: 236 SDAEKALSSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHG 294
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R+ D +G+A
Sbjct: 295 MQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQAD------RGFA 348
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 349 FIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 385
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 181/350 (51%), Gaps = 26/350 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 85 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNFQSKGYNYGFVEYDDPGAAERAMQT 144
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R ++E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 145 LNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEA 204
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNER 183
R++ D +T +S+GY FV++ + EAE A+++M+G+WLGSR+IR NW+ +K P +
Sbjct: 205 RVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA 264
Query: 184 KRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
Q T T +++ V NQ+ T Y G + + +F F
Sbjct: 265 MAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 324
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G + + R ++G+AFVK T E A +AI + ++NG +KC WGK+ +
Sbjct: 325 GYVTETRFQSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTGQFDGYN 384
Query: 291 APTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATA----AQLPQQFYQY 336
TPQ S PQ +Y ++PQ +A A A P QF Q+
Sbjct: 385 PAQTPQ--SAVPQS-AVYPGPPQAFFPQYGQPSAPAMSPQAATPGQFGQH 431
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 181/342 (52%), Gaps = 29/342 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GP++GCK+IR+ Y F+++ AA A
Sbjct: 44 DSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRK-DKSSYGFVDYFDRRSAALA 102
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + ++DTSNHY+IFVGDLSPE+ TL F+ +
Sbjct: 103 IVTLNGRHLFGQPIKVNWAYASAQ--REDTSNHYNIFVGDLSPEVTDATLFACFSVYTSC 160
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI +NG+WLGSR IR NW+ + A+
Sbjct: 161 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAV--- 217
Query: 183 RKRQNSHTKTI------TFDE----VYNQSSPTN----CTVYCGGFGKDLNEELVSKVFS 228
QNS K++ T D+ V N+ +P N TVY G ++ + + F
Sbjct: 218 -GEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFH 276
Query: 229 PF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
G I D+R+ ++KG+ FV++++ A AI+ + + G VKC WG S
Sbjct: 277 ALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWG------SKP 330
Query: 287 AQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQ 328
P + + P P Q P + + + Q A AQ
Sbjct: 331 TPPGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQ 372
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 37/208 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E FA G + C+++R ++ Y FV + +
Sbjct: 41 PGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKS----SYGFVDYFDR 96
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ L + I+ NW+ + +R+ ++H YN
Sbjct: 97 RSAALAIVTLNGRHLFGQPIKVNWAY-----ASAQREDTSNH---------YN------- 135
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 136 -IFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 194
Query: 262 IHNTDINGHTVKCFW-----GKESENNS 284
++ + ++C W G E NS
Sbjct: 195 LNGKWLGSRQIRCNWAAKGAGAVGEQNS 222
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 164/295 (55%), Gaps = 19/295 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LYVG LD VTE++L +F G V K+I + + Y F+EF A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 206
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F ++++A+ A+++M+G+WLGSR+IR NW+ +K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 326
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 327 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 160/284 (56%), Gaps = 17/284 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATA 62
TT+YVGNLD VT+ +L +F+ +G V K+I G Y F+EF VA A
Sbjct: 18 TTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQA 77
Query: 63 LAAMNKRVFLEKEMKVNWASSPGN------QPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
+ MN R E++ NWA N K+DT+NH+H+FVGDL+ EI + L +AF
Sbjct: 78 IQDMNGRKIFNYEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAF 137
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK- 175
+ FG +S ++ DP + KS+G+ FV+F K +AE AI MNG+WLG+R IR NW+T+K
Sbjct: 138 SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKG 197
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
AM + Q + ++ V Q+ ++Y G ++++ + + F FG + +
Sbjct: 198 QTAMPAPQPGQ-----QLPYEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQRFGYVQE 252
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
++ ++G+AFVK T E A +AI + N ING+ K WGK+
Sbjct: 253 VKFQADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKLSWGKD 296
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L + +E L FS+ G + V+ +P + + F+ F T A A+A M
Sbjct: 119 VFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATM 178
Query: 67 NKRVFLEKEMKVNWASSPGN------QPKQDTSNHY----------HIFVGDLSPEIETQ 110
N + ++ NWA+ G QP Q I+VG++ +
Sbjct: 179 NGEWLGTRPIRCNWATQKGQTAMPAPQPGQQLPYEVVVQQTPAYVTSIYVGNIPLNVSQN 238
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L + F FG + + D +G+AFV A NAI + + + +
Sbjct: 239 DLVQPFQRFGYVQEVKFQAD------RGFAFVKMDTHENAANAIVHLQNMSINGNVTKLS 292
Query: 171 WSTRKPP 177
W +PP
Sbjct: 293 WGKDRPP 299
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 195 FDEVYNQSSPTN--CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV--------FKEKGY 244
D N + TN T+Y G + + + +++++F+ G +V +++ F Y
Sbjct: 4 MDVTSNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNY 63
Query: 245 AFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
FV+F A AI+ ++ I + ++ W AQPSA P
Sbjct: 64 GFVEFADPRVAEQAIQDMNGRKIFNYEIRANW----------AQPSANINP 104
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 162/293 (55%), Gaps = 23/293 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--------REPGNDPYAFLEFVHHTVAAT 61
LYVG LD VTE++L +F G V+ K+I ++ Y F+E+ A
Sbjct: 89 LYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAAER 148
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 149 AMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 208
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+S R++ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 268
Query: 182 ERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++++ ++ T T FD + Q+ T Y G + + +
Sbjct: 269 QQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQNDLIPL 328
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
F FG +V+ R ++G+AFVK T E A AI + ++NG +KC WGK+
Sbjct: 329 FQNFGFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 381
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 39/364 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAATALAAMN 67
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+ +N
Sbjct: 87 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADRAMQTLN 146
Query: 68 KRVFLEKEMKVNWA-SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
R + E++VNWA + + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R
Sbjct: 147 GRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEAR 206
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
++ D +T +S+GY FV+F +++AE A+++M+G+WLGSR+IR NW+ +K +++
Sbjct: 207 VMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAM 266
Query: 187 NSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
++ T T ++ V NQ+ T Y G V +F FG
Sbjct: 267 SAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVPLFQNFG 326
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
+V+ R ++G+AF+K + E A AI ++ ++NG +KC WGK+
Sbjct: 327 YVVESRFQADRGFAFIKMDSHENAAQAICGLNGYNVNGRPLKCSWGKDK----------- 375
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQY-GQLGYPQGYVGMVG 350
NST PQ + +Q + PQ+A F QY GQ PQG G
Sbjct: 376 ------NSTNPQGNFDPSQA---FSPQSAGGPGFPGTPSTYFPQYGGQFSGPQGNFGPNS 426
Query: 351 RQVP 354
Q P
Sbjct: 427 AQSP 430
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 189/385 (49%), Gaps = 38/385 (9%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTV 58
E LYVG LD VTE++L +F G V+ KVI + Y F+EF
Sbjct: 88 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGA 147
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
A A+ +N R + E++VNWA K+DTS H+HIFVGDLS E+ + L +AF+
Sbjct: 148 AERAMQTLNGRRIHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSA 207
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG +S R++ D +T +S+GY FV+F + +A+ A+ +M+G+WLGSR+IR NW+ +K
Sbjct: 208 FGSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQP 267
Query: 179 MTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
++++ + T T +D V Q+ T Y G + +
Sbjct: 268 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDL 327
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 328 VPLFQNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD---- 383
Query: 284 STLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQ 343
PT N + Q +N G ++PQ Y A + Q G+ Q
Sbjct: 384 ------RPPTGQFDNFSGQQGTSPFNSSPGTYFPQ---YGGPGAPMTPQGPNPAGRGWDQ 434
Query: 344 GYVGMVGR---QVPGWQGIPGAQPT 365
GM G+ QVPG G Q T
Sbjct: 435 --AGMTGQGYGQVPGNAGFGRGQTT 457
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 180 DTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRDR 236
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL +M+ + ++ NWA+ G QP H+H
Sbjct: 237 GDADKALNSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHG 295
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG + R+ D +G+A
Sbjct: 296 VQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLVPLFQNFGYVLETRLQAD------RGFA 349
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 350 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 386
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 24/319 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 84 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEYDDPQCAERAMQT 143
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R ++E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 144 LNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEA 203
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNER 183
R++ D +T +S+GY FVSF + +AE A+++M+G+WLGSR+IR NW+ +K P +
Sbjct: 204 RVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSYSQAQA 263
Query: 184 KRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
Q T T +F+ + Q+ T Y G + + +F F
Sbjct: 264 MVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 323
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE-----NNST 285
G + + R ++G+AFVK T E A +AI + ++NG +KC WGK+ + +
Sbjct: 324 GYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTGQFDGYS 383
Query: 286 LAQPSAPTTPQPNSTAPQF 304
A P + P P + PQ+
Sbjct: 384 PAPPQSAFPPTPQTYFPQY 402
>gi|339242463|ref|XP_003377157.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316974060|gb|EFV57598.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 352
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 145/240 (60%), Gaps = 25/240 (10%)
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQT 133
+EM+VNWA+SPG Q K DTS + + + + A + S+ +++RD QT
Sbjct: 74 QEMRVNWATSPGTQAKVDTSKKHLLLMEKFRKRPPLHQIVRADSLLFISSDVKVIRDLQT 133
Query: 134 LKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP--PAMTNERKRQNSHTK 191
LKSKGY FVS+V +AE AI MNGQWLG R+IRTNW+TRKP PA +
Sbjct: 134 LKSKGYGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKPGLPAQ---------NLG 184
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDL--NEELVSKVFSPFGTIVDIRVFKEKGYAFVKF 249
+TFD+V QSSP N TVY G + + + ++F+ FG+I+++RVFK++GYAFV+F
Sbjct: 185 QLTFDDVMAQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGSILEVRVFKQQGYAFVRF 244
Query: 250 TTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYN 309
KE+A HAI +I T+ING +V+C WGKE ++ N+TAP + Y YN
Sbjct: 245 DNKESAAHAILNITGTEINGSSVRCSWGKEGGLAAS------------NNTAPNYGYGYN 292
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKV 78
V + L + S + ++ + ++ G Y F+ +V H A A+ MN + + ++
Sbjct: 113 VRADSLLFISSDVKVIRDLQTLKSKG---YGFVSYVSHDDAERAIEQMNGQWLGRRTIRT 169
Query: 79 NWASSPGNQPKQD-------------TSNHYHIFVGDLSPEIET--QTLKEAFAPFGEIS 123
NWA+ P Q+ + + ++VG ++ L+ FA FG I
Sbjct: 170 NWATRKPGLPAQNLGQLTFDDVMAQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGSIL 229
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
R+ K +GYAFV F K A +AI + G + S+R +W A +N
Sbjct: 230 EVRV------FKQQGYAFVRFDNKESAAHAILNITGTEINGSSVRCSWGKEGGLAASNN 282
>gi|134085593|gb|ABO52855.1| IP18393p [Drosophila melanogaster]
Length = 275
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 158/270 (58%), Gaps = 52/270 (19%)
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
MNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 1 MNGQWLGSRSIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGING 55
Query: 217 DL----NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
L NEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN V
Sbjct: 56 ALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPV 115
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM-GYWY----- 316
KC WGKES + P+ + + A FP+ Y QQ+ GYWY
Sbjct: 116 KCAWGKESGD------PNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPT 169
Query: 317 --PQAAAYTATAAQLPQ--QFYQYGQL-GYPQ-GYVGMVGRQVPG-WQGIPGAQP----- 364
A A Q Q Q + YGQ GY Q GY+GM G Q+PG WQ +P QP
Sbjct: 170 YPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMGM-GVQLPGTWQSVP-PQPQLASA 227
Query: 365 -------TAQQMAVAQAQPSMMAAYAMQQF 387
Q + A Q + + AY MQQF
Sbjct: 228 AAATAPQITQSVGSALPQAAGVVAYPMQQF 257
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G LS + + L++ F+P+G I R+ +D KGYAFV F K A +AI A+N
Sbjct: 55 GALSGFLNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNT 108
Query: 161 WLGSRSIRTNWS 172
+ + ++ W
Sbjct: 109 EINQQPVKCAWG 120
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 39 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 95
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGN 86
A A+ A+N ++ +K W G+
Sbjct: 96 EAATHAIVAVNNTEINQQPVKCAWGKESGD 125
>gi|195503593|ref|XP_002098716.1| GE23778 [Drosophila yakuba]
gi|194184817|gb|EDW98428.1| GE23778 [Drosophila yakuba]
Length = 269
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 158/270 (58%), Gaps = 52/270 (19%)
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
MNGQWLGSRSIRTNW+TRKPPA + + + K +TFDEVYNQSSPTNCTVYCGG
Sbjct: 1 MNGQWLGSRSIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQSSPTNCTVYCGGING 55
Query: 217 DL----NEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
L NEE++ K FSP+GTI +IRVFK+KGYAFV+F+TKE ATHAI +++NT+IN V
Sbjct: 56 ALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPV 115
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPY----------IYNQQM-GYWY----- 316
KC WGKES + P+ + + A FP+ Y QQ+ GYWY
Sbjct: 116 KCAWGKESGD------PNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPT 169
Query: 317 --PQAAAYTATAAQLPQ--QFYQYGQL-GYPQ-GYVGMVGRQVPG-WQGIPGAQP----- 364
A A Q Q Q + YGQ GY Q GY+GM G Q+PG WQ +P QP
Sbjct: 170 YPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMGM-GVQLPGTWQSVP-PQPQLASA 227
Query: 365 -------TAQQMAVAQAQPSMMAAYAMQQF 387
Q + A Q + + AY MQQF
Sbjct: 228 AAATAPQITQSVGSALPQAAGVVAYPMQQF 257
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G LS + + L++ F+P+G I R+ +D KGYAFV F K A +AI A+N
Sbjct: 55 GALSGFLNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNT 108
Query: 161 WLGSRSIRTNWS 172
+ + ++ W
Sbjct: 109 EINQQPVKCAWG 120
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DESQPT--TLYVGNLDVSVT----EELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHH 56
++S PT T+Y G ++ +++ EE+L FS G ++ +V ++ G YAF+ F
Sbjct: 39 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKG---YAFVRFSTK 95
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGN 86
A A+ A+N ++ +K W G+
Sbjct: 96 EAATHAIVAVNNTEINQQPVKCAWGKESGD 125
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 131/229 (57%), Gaps = 32/229 (13%)
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ SN ++VG+L + L F+ G + C+I+R+P + YAFV F A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREP---GNDPYAFVEFTNHQCA 59
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
A+ AMN + + ++ VYNQSSPTNCTVY
Sbjct: 60 ATALAAMNKRSFLDKEMK-----------------------------VYNQSSPTNCTVY 90
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
CGGF + +EL+ K FSPFGTI DIRVFKEKGYAF+KFTTKE ATHAIES HNT+ING
Sbjct: 91 CGGFTNGITDELIKKTFSPFGTIQDIRVFKEKGYAFIKFTTKEAATHAIESTHNTEINGS 150
Query: 271 TVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQA 319
VKCFWGKE+ + +++ + Q + A Q+PY Y QQMGYWY Q
Sbjct: 151 IVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYPYGYGQQMGYWYAQG 199
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 110/171 (64%), Gaps = 15/171 (8%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
M +ES P TLYVGNLD +V+E+LLCALFSQIG VKGCK+IREPGNDPYAF+EF +H AA
Sbjct: 1 MSEESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAA 60
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TALAAMNKR FL+KEMKV SSP N ++ G + I + +K+ F+PFG
Sbjct: 61 TALAAMNKRSFLDKEMKVYNQSSPTN---------CTVYCGGFTNGITDELIKKTFSPFG 111
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
I + R+ K KGYAF+ F K A +AI + + + ++ W
Sbjct: 112 TIQDIRV------FKEKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFW 156
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 163/296 (55%), Gaps = 20/296 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTV 58
E LYVG LD VTE++L +F G V K+I + Y F+EF
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
A A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+
Sbjct: 147 AERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 206
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FG +S R++ D +T +S+GY FV+F ++++A+ A+++M+G+WLGSR+IR NW+ +K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 179 MTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
++++ + T T +D V Q+ T Y G + +
Sbjct: 267 SISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDL 326
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 327 VPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 162/290 (55%), Gaps = 20/290 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTVAATALA 64
LYVG LD VTE++L +F G V K+I + Y F+EF A A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 153 TLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 212
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
R++ D +T +S+GY FV+F ++++A+ A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 272
Query: 185 RQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
+ T T +D V Q+ T Y G + + +F
Sbjct: 273 AMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQN 332
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 333 FGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 162/290 (55%), Gaps = 20/290 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-----NDPYAFLEFVHHTVAATALA 64
LYVG LD VTE++L +F G V K+I + Y F+EF A A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 153 TLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSE 212
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
R++ D +T +S+GY FV+F ++++A+ A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQ 272
Query: 185 RQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
+ T T +D V Q+ T Y G + + +F
Sbjct: 273 AMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQN 332
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 333 FGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 159/289 (55%), Gaps = 19/289 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQT 163
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ G +S
Sbjct: 164 LNGRRVHQSEIRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSACGSVSEA 223
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D +T +S+GY FV+F +A+AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 224 RVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 283
Query: 186 QNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
+ T T +D V Q+ T Y G + + +F F
Sbjct: 284 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF 343
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 344 GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 160/293 (54%), Gaps = 17/293 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVA 59
E++ LY+GN+ VTE +L +F+ GPV+ K+I + G Y F+EF A
Sbjct: 8 ENKRPHLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLNYGFVEFYTMQGA 67
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
AL + R + EMKVNWA NQ K+D +NH+H+F GDLSPE+ L++ F+
Sbjct: 68 EQALQTLAGRKLFDTEMKVNWAYQ--NQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSA 125
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--- 175
FG +S+ R++ D + KS+GY F++F +A+AE AI AMNG+WLGSR+IR NW+ +K
Sbjct: 126 FGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQG 185
Query: 176 -------PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
+ ++ V Q+ +N TVY G + + +F
Sbjct: 186 MMGDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQ 245
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
+G IV+IR+ ++G+AFVK T E A AI + G ++KC WGK+ E
Sbjct: 246 GYGYIVEIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQGRSLKCSWGKDRE 298
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 21/291 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND------PYAFLEFVHHTVAATAL 63
LYVG LD VTE++L +F G V K+I + Y F+E+ A A+
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAERAM 142
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
+N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 143 TTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVS 202
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNE 182
R++ D +T +S+GY FV+F ++A+AE A+ +M+G+WLGSR+IR NW+ +K P+++ +
Sbjct: 203 EARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQPSISQQ 262
Query: 183 RK-------------RQNSHTKTI-TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
+ + T+ I +++ V NQ+ T Y G + + +F
Sbjct: 263 QAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADLVPLFQ 322
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
FG +V+ R ++G+AF+K T E A AI + ++NG +KC WGK+
Sbjct: 323 NFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 373
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 26/341 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-------YAFLEFVHHTVAATA 62
LYVG LD VTEE+L +F G V+ K+I + Y F+E+ A A
Sbjct: 91 LYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERA 150
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +
Sbjct: 151 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S R++ D +T +S+GY F +F ++ +AE A+++M+G+WLGSR+IR NW+ +K ++
Sbjct: 211 SEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 183 RKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF 227
++ ++ T T +D + Q+ T Y G ++ + +F
Sbjct: 271 QQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLF 330
Query: 228 SPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
FG +V+ R ++G+AFVK + E A AI + ++NG +KC WGK+ S
Sbjct: 331 QNFGYVVETRFQSDRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAGF 390
Query: 288 QPSAPT-TPQPNSTA---PQFPYIYNQQMGYWYPQAAAYTA 324
S + +PQ T P P Y Q G PQA +A
Sbjct: 391 DGSQQSYSPQAGPTPGGFPGTPNAYFPQYGGMPPQAGPQSA 431
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 163/297 (54%), Gaps = 21/297 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND------PYAFLEFVHHT 57
E LYVG LD VTE++L +F G V K+I + Y F+EF
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPG 146
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+
Sbjct: 147 AAERAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFS 206
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP- 176
FG +S R++ D +T +S+GY FV+F + EA+ A+ +M+G+WLGSR+IR NW+ +K
Sbjct: 207 AFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQ 266
Query: 177 PAMTNERK-------------RQNSHTKTI-TFDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
P+++ ++ + T I ++D V Q+ T Y G +
Sbjct: 267 PSISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQND 326
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ +F FG +++ R+ ++G+AFVK + E A AI ++ ++NG +KC WGK+
Sbjct: 327 LVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGKD 383
>gi|47216544|emb|CAG04722.1| unnamed protein product [Tetraodon nigroviridis]
Length = 221
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 140/226 (61%), Gaps = 18/226 (7%)
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + R+++D T KSKGY FVSF K +AENAI+ M GQWL R IRTNW+TRKPPA
Sbjct: 9 VWDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPA--- 65
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ Q++ +K + FD++ QSSP NCTVYCGG L E L+ + FSPFG I++IRVF +
Sbjct: 66 PKSFQDNGSKHLKFDDIVTQSSPQNCTVYCGGIQAGLTEHLMQQTFSPFGQIMEIRVFPD 125
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
KGY+F++F++ ++A HAI S++ T I G+ VKCFWGKES + + NS
Sbjct: 126 KGYSFIRFSSHDSAAHAIVSVNGTVIEGNVVKCFWGKESPDMTK------------NSQQ 173
Query: 302 PQFPYI--YNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
++ Y +NQ G Q Y A Q+P + YGQ QGY
Sbjct: 174 VEYNYWGQWNQTYGNPQQQYGQYMANGWQVP-SYNMYGQTWNQQGY 218
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 33 PVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK 89
PV +V+++ + Y F+ F + A A++ M + ++++ NWA+ PK
Sbjct: 8 PVWDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPK 67
Query: 90 --QDT-SNHYH--------------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQ 132
QD S H ++ G + + +++ F+PFG+I R+ D
Sbjct: 68 SFQDNGSKHLKFDDIVTQSSPQNCTVYCGGIQAGLTEHLMQQTFSPFGQIMEIRVFPD-- 125
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
KGY+F+ F A +AI ++NG + ++ W P N ++
Sbjct: 126 ----KGYSFIRFSSHDSAAHAIVSVNGTVIEGNVVKCFWGKESPDMTKNSQQ 173
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAA 65
Q T+Y G + +TE L+ FS G + +V + G Y+F+ F H AA A+ +
Sbjct: 89 QNCTVYCGGIQAGLTEHLMQQTFSPFGQIMEIRVFPDKG---YSFIRFSSHDSAAHAIVS 145
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIF 99
+N V +K W + K Y+ +
Sbjct: 146 VNGTVIEGNVVKCFWGKESPDMTKNSQQVEYNYW 179
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 17/297 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 82 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 141
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 142 AMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGS 201
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P++
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 261
Query: 181 NERKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ Q T ++ V Q+ T Y G V +
Sbjct: 262 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 321
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG +V+ R ++G+AF+K + E+A AI ++ ++NG +KC WGK+ N
Sbjct: 322 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPN 378
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 17/297 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 142
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 143 AMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGS 202
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P++
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 181 NERKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ Q T ++ V Q+ T Y G V +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG +V+ R ++G+AF+K + E+A AI ++ ++NG +KC WGK+ N
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPN 379
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 79/217 (36%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRDR 228
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPK--------------------------- 89
A AL++M+ + ++ NWA+ G QP
Sbjct: 229 PDAEKALSSMDGEWLGSRAIRCNWANQKG-QPSIAQQQAMQAMGLTPTTPFGHHQFPAHG 287
Query: 90 ---------QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
Q S +VG+L+P + F FG + R D +G+A
Sbjct: 288 VASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFA 341
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI MNG + R ++ +W K P
Sbjct: 342 FIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTP 378
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 17/297 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 142
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 143 AMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGS 202
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P++
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 181 NERKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ Q T ++ V Q+ T Y G V +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG +V+ R ++G+AF+K + E+A AI ++ ++NG +KC WGK+ N
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPN 379
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 79/217 (36%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS G V +V+ R G Y F+ F
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRG---YGFVAFRDR 228
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPK--------------------------- 89
A AL++M+ + ++ NWA+ G QP
Sbjct: 229 PDAEKALSSMDGEWLGSRAIRCNWANQKG-QPSIAQQQAMQAMGLTPTTPFGHHQFPAHG 287
Query: 90 ---------QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
Q S +VG+L+P + F FG + R D +G+A
Sbjct: 288 VASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFA 341
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI MNG + R ++ +W K P
Sbjct: 342 FIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTP 378
>gi|149067625|gb|EDM17177.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_e [Rattus norvegicus]
Length = 181
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T KSKGY FVSF K +AENAI M GQWLG R IRTNW+TRKPPA + Q ++TK
Sbjct: 3 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA---PKSTQETNTKQ 59
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
+ F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F+T
Sbjct: 60 LRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTH 119
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKES 280
E+A HAI S++ T I GH VKC+WGKES
Sbjct: 120 ESAAHAIVSVNGTTIEGHVVKCYWGKES 147
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK-----------------Q 90
Y F+ F + A A+ M + ++++ NWA+ PK Q
Sbjct: 9 YGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQ 68
Query: 91 DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
+ + ++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A
Sbjct: 69 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESA 122
Query: 151 ENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+AI ++NG + ++ W P N
Sbjct: 123 AHAIVSVNGTTIEGHVVKCYWGKESPDMTKN 153
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 199/385 (51%), Gaps = 25/385 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN++ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 124
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 125 IMTLHGRHIYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 182
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 183 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNSEEKPE 242
Query: 183 RKRQN---------SHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
N S++ T + ++ +P N TVY G G ++N + + + F
Sbjct: 243 TDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYS 302
Query: 230 FGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G I +IRV ++KG+ FV+++T A AI+ + + G +KC WG + T +
Sbjct: 303 LGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLVVRGKPIKCSWGNKPTPPGTSS 362
Query: 288 QPSAPTTP--QPNSTAPQFPYIYN-QQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
+P P QP P P + ++ + Q A A A Q+ Q GQ+ G
Sbjct: 363 KPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQV--SAG 420
Query: 345 YVGMVGRQVPGWQGIPGAQPTAQQM 369
+ G Q + G P Q +AQQ+
Sbjct: 421 LLAAAGSQAL-YDGYPN-QSSAQQL 443
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG+++P + L E F G + C+++R ++ + F
Sbjct: 57 SNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS----SFGF 112
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 113 VDYYDRRSAALAIMTLHGRHIYGQAIKVNWAY-----ASTQREDTSGHFH---------- 157
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 158 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 210
Query: 256 THAIESIHNTDINGHTVKCFWGKESENNS 284
AI + + ++C W ++NNS
Sbjct: 211 ETAITEMTGKWLGSRQIRCNWA--TKNNS 237
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 197/393 (50%), Gaps = 38/393 (9%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 86 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAER 145
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 146 AMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 205
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAM 179
+S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K P
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 180 TNERKRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+ +Q T T ++D + NQ+ T Y G + + +
Sbjct: 266 QQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVPL 325
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE-SENNST 285
F FG +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+ + +
Sbjct: 326 FQNFGFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPAHHQ 385
Query: 286 LAQPSAPTTPQPNSTA--PQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQ 343
P+ P +PQ T P P Y Q G + AA + +P
Sbjct: 386 PFDPNQPYSPQSAQTPGYPGTPSAYFNQYGGRCSRTAAAPNSVVNVP------------- 432
Query: 344 GYVGMVGRQVPGWQGIPGAQPTAQQMAVAQAQP 376
+G PG Q G P AQ A AQP
Sbjct: 433 -----IGSYGPGQQPGYGGGPQAQSPAGYAAQP 460
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 185/355 (52%), Gaps = 50/355 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS GP++GCK+IR+ Y F+++ AA +
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKE-KSSYGFVDYFDRRSAALS 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 108 IVTLNGRHLFGQPIKVNWAYA--SSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI +NG+WLGSR IR NW+T+ A NE
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKG--AGGNE 223
Query: 183 RKRQNSHTKTI------TFDEVY----------NQSSPTN----CTVYCGGFGKDLNEEL 222
K NS K++ T EV N +P N TVY G ++
Sbjct: 224 DK-PNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVD 282
Query: 223 VSKVFSPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F G I D+RV ++KG+ FV+++T A AI+ + + G +KC WG +
Sbjct: 283 LHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKP 342
Query: 281 ENNSTLAQPSAPTTPQPNSTAPQFPYI-------YNQQM---------GYWYPQA 319
T +TP P AP P I Y +QM G +PQA
Sbjct: 343 TPAGT------SSTPLPPPAAPHMPGISAADFAAYERQMALSKMGGAQGLMHPQA 391
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 38/209 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 46 PGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS----SYGFVDYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I +NG+ L + I+ NW+ +++R+ + H YN
Sbjct: 102 RSAALSIVTLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------YN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 141 -IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 199
Query: 262 IHNTDINGHTVKCFW------GKESENNS 284
++ + ++C W G E + NS
Sbjct: 200 LNGRWLGSRQIRCNWATKGAGGNEDKPNS 228
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 178/353 (50%), Gaps = 25/353 (7%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPY--AFLEFVHHTVAAT 61
E LY+G LD VTE++L +F G V+ K+I + Y F+E+ AA
Sbjct: 48 EPNKRALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAAR 107
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R E++VNWA K+DTSNH+HIFVGDLS E+ + L +AFA FG
Sbjct: 108 AMQTLNGRRV--HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGS 165
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
+S R++ D +T +S+GY FV+F + +AE A+++M+G+WLGSR+IR NW+ +K P++
Sbjct: 166 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 225
Query: 181 NERKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ Q T ++ + Q+ TVY G V +
Sbjct: 226 QQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 285
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG +V+ R ++G+AF+K + E A AI ++ ++NG +KC WGK+ N+
Sbjct: 286 FQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAG 345
Query: 287 A-----QPSAPTTPQPNSTAPQFPYIYNQQMGYWYP-QAAAYTATAAQLPQQF 333
Q +P + P P Y Q G Y Q Y AQ P +
Sbjct: 346 GFDPAQQGYSPQSATAPGAYPGTPTAYFPQYGAQYSGQPGNYGGPTAQSPAGY 398
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 200/385 (51%), Gaps = 25/385 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN++ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 68 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 126
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 127 IMTLHGRHIYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 184
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPE 244
Query: 183 RKRQN---------SHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
N +++ T + ++ +P N TVY G G ++N + + + F
Sbjct: 245 TDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 304
Query: 230 FGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G I +IRV ++KG+ FV+++T A AI+ + + G ++KC WG + T +
Sbjct: 305 LGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPTPPGTTS 364
Query: 288 QPSAP--TTPQPNSTAPQFPYIYN-QQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
+P P + QP P + ++ + Q A A A Q+ Q GQ+ G
Sbjct: 365 KPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQV--SAG 422
Query: 345 YVGMVGRQVPGWQGIPGAQPTAQQM 369
+ G Q + G P Q +AQQ+
Sbjct: 423 LLAAAGSQAL-YDGYPN-QSSAQQL 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG+++P + L E F G + C+++R ++ + F
Sbjct: 59 SNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS----SFGF 114
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 115 VDYYDRRSAALAIMTLHGRHIYGQAIKVNWAY-----ASTQREDTSGHFH---------- 159
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 160 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 212
Query: 256 THAIESIHNTDINGHTVKCFWGKES 280
AI + + ++C W ++
Sbjct: 213 ETAITEMTGKWLGSRQIRCNWATKT 237
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 19/289 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQT 163
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA K+DTS+H+HIFVGDLS E+ + L +AF+ G +S
Sbjct: 164 LNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEA 223
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 224 RVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 283
Query: 186 QNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
+ T T +D V Q+ T Y G + + +F F
Sbjct: 284 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF 343
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 344 GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 19/289 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQT 163
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA K+DTS+H+HIFVGDLS E+ + L +AF+ G +S
Sbjct: 164 LNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEA 223
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K ++++
Sbjct: 224 RVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 283
Query: 186 QNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
+ T T +D V Q+ T Y G + + +F F
Sbjct: 284 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF 343
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 344 GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 200/385 (51%), Gaps = 25/385 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN++ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 43 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 101
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 102 IMTLHGRHIYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 159
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 160 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPE 219
Query: 183 RKRQN---------SHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
N +++ T + ++ +P N TVY G G ++N + + + F
Sbjct: 220 TDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 279
Query: 230 FGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G I +IRV ++KG+ FV+++T A AI+ + + G ++KC WG + T +
Sbjct: 280 LGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPTPPGTTS 339
Query: 288 QPSAP--TTPQPNSTAPQFPYIYN-QQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQG 344
+P P + QP P + ++ + Q A A A Q+ Q GQ+ G
Sbjct: 340 KPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQV--SAG 397
Query: 345 YVGMVGRQVPGWQGIPGAQPTAQQM 369
+ G Q + G P Q +AQQ+
Sbjct: 398 LLAAAGSQAL-YDGYPN-QSSAQQL 420
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG+++P + L E F G + C+++R ++ + F
Sbjct: 34 SNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS----SFGF 89
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 90 VDYYDRRSAALAIMTLHGRHIYGQAIKVNWAY-----ASTQREDTSGHFH---------- 134
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 135 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 187
Query: 256 THAIESIHNTDINGHTVKCFWGKES 280
AI + + ++C W ++
Sbjct: 188 ETAITEMTGKWLGSRQIRCNWATKT 212
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 19/289 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEYDDPGAAERAMQT 142
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R ++E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 143 LNGRRVHQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEA 202
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNER 183
R++ D +T +S+GY FV+F + EAE A+++M+G+WLGSR+IR NW+ +K P +
Sbjct: 203 RVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA 262
Query: 184 KRQNSHTKTI-------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
Q T T +++ + +Q+ T Y G + + +F F
Sbjct: 263 MAQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 322
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G + + R ++G+AF+K + E A +AI + +NG +KC WGK+
Sbjct: 323 GYVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGKD 371
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 160/293 (54%), Gaps = 23/293 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--------YAFLEFVHHTVAAT 61
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 99 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAAER 158
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A+ +N R + E++VNWA K+DTS+H+HIFVGDLS E+ + L +AF+ G
Sbjct: 159 AMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGS 218
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K +
Sbjct: 219 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 278
Query: 182 ERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
+++ + T T +D V Q+ T Y G + + +
Sbjct: 279 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 338
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
F FG +V+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 339 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 391
>gi|213515090|ref|NP_001135023.1| cytotoxic granule-associated RNA binding protein 1 [Salmo salar]
gi|209738084|gb|ACI69911.1| Nucleolysin TIA-1 [Salmo salar]
Length = 409
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 167/299 (55%), Gaps = 19/299 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKG--CKVIREPGNDP--YAFLEFVHHTVAATAL 63
+TL++GN+ +V E +L ++ Q P +G CK+ +P N P Y F+ F A +AL
Sbjct: 21 STLHIGNIHSAVDENVLVSILQQFFPGQGFQCKLFPDPNNSPDLYCFMTFADVNTATSAL 80
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+ +N R + K++KV+WAS Q KQ + + I+VGDL E + L +AF PFGE
Sbjct: 81 SILNGREVMGKKLKVSWASGGAGQFKQSQISGTTHSIYVGDLPHECDDNMLAQAFRPFGE 140
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + R+VRDP++ SKG+ F+ + + EAE AI M+G + S+S++ +W+T
Sbjct: 141 VLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGTISSKSVKVSWAT-------- 192
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
R + + + +++VY QS N T+Y G + + E+ + F P+G ++D ++F +
Sbjct: 193 -RSKATTSVPQLNYNDVYQQSGAHNTTLYVGNLPESMKEQFLISFFEPYGAVLDTKIFHD 251
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
K +AF+K T E A +I + ++G +K +W +++ N Q + P+ P P T
Sbjct: 252 KHFAFIKMDTHEAAATSIVKCNGQPVDGCVMKVWWSRDNPN----LQGNMPSNPAPQPT 306
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 171/311 (54%), Gaps = 24/311 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ +VTE LL +F GPV+ CK+IR+ + F+++ AA A
Sbjct: 72 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKE-KSSFGFVDYYDRRSAALA 130
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 131 IMSLHGRHIYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSVYTSC 188
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 189 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK---TNAEE 245
Query: 183 RKRQNSHTKTITFD------------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKV 226
++ ++H + + E ++ +P N TVY G G ++N + + +
Sbjct: 246 KQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 305
Query: 227 FSPFGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F G I ++RV ++KG+ FV++ T A AI+ + I G +KC WG +
Sbjct: 306 FYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKCSWGNKPTPPG 365
Query: 285 TLAQPSAPTTP 295
T ++P P P
Sbjct: 366 TSSKPLPPPGP 376
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 33/201 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG++ P + L E F G + C+++R ++ + F
Sbjct: 63 SNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKS----SFGF 118
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI +++G+ + ++I+ NW+ + +R+ + H
Sbjct: 119 VDYYDRRSAALAIMSLHGRHIYGQAIKVNWAY-----ASTQREDTSGHFH---------- 163
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 164 -------IFVGDLSSEVNDATLYACFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 216
Query: 256 THAIESIHNTDINGHTVKCFW 276
AI + + ++C W
Sbjct: 217 ETAITEMTGKWLGSRQIRCNW 237
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 158/290 (54%), Gaps = 20/290 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LYVG LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 71 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNFQSKGFNYGFVEYDDPGAAERAMQT 130
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R ++E++VNWA K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 131 LNGRRVHQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEA 190
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK--PPAMTNER 183
R++ D +T +S+GY FV+F +A+AE A+++M+G+WLGSR+IR NW+ +K P +
Sbjct: 191 RVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQA 250
Query: 184 KRQNSHTKTI--------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
Q T T +++ + Q+ T Y G + + +F
Sbjct: 251 MVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQN 310
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
FG + + R ++G+AF+K T E A +AI + +NG +KC WGK+
Sbjct: 311 FGYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKD 360
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 170/294 (57%), Gaps = 25/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRSAAIA 132
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDL PE+ L FA F
Sbjct: 133 IVSLNGRQLFGQPIKVNWAYA--STQREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSC 190
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+NAI +NG+WLG+R +R NW+T+ A
Sbjct: 191 SDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANA---G 247
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QN+ +K + E+ N SS P TVY G D+N V + F
Sbjct: 248 EEKQNTDSKGMI--ELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFF 305
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G+I ++RV ++KG+ FV+++T E A AI++ + I G +KC WG +
Sbjct: 306 HSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSK 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L E F G + C+++R ++ + FV + +
Sbjct: 71 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS----SFGFVDYYDR 126
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 127 RSAAIAIVSLNGRQLFGQPIKVNWAY-----ASTQREDTSGH---------FN------- 165
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + F+ F + D RV + +G+ FV F ++ A +AI
Sbjct: 166 -IFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINE 224
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + V+C W + N
Sbjct: 225 LNGKWLGNRQVRCNWATKGAN 245
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 170/294 (57%), Gaps = 25/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 36 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRSAAIA 94
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDL PE+ L FA F
Sbjct: 95 IVSLNGRQLFGQPIKVNWAYA--STQREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSC 152
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+NAI +NG+WLG+R +R NW+T+ A
Sbjct: 153 SDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANA---G 209
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QN+ +K + E+ N SS P TVY G D+N V + F
Sbjct: 210 EEKQNTDSKGMI--ELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFF 267
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G+I ++RV ++KG+ FV+++T E A AI++ + I G +KC WG +
Sbjct: 268 HSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSK 321
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L E F G + C+++R ++ + FV + +
Sbjct: 33 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS----SFGFVDYYDR 88
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 89 RSAAIAIVSLNGRQLFGQPIKVNWAY-----ASTQREDTSGH---------FN------- 127
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + F+ F + D RV + +G+ FV F ++ A +AI
Sbjct: 128 -IFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINE 186
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + V+C W + N
Sbjct: 187 LNGKWLGNRQVRCNWATKGAN 207
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LY+G LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 87 EPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEYDDPGAA 146
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 206
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +S R++ D +T +S+GY FV+F + +AE A+ +M+ +WLGSR+IR NW+ +K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPS 266
Query: 180 TNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
++++ + T T +D V Q+ T Y G + +
Sbjct: 267 ISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +V+ R+ ++G+AF+K T E A AI ++ +NG +KC WGK+
Sbjct: 327 PLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 381
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 170/305 (55%), Gaps = 21/305 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL LFS G ++GCK+IR+ + Y F+++ + AA A
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS-YGFVDYFDRSSAAIA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + G ++DTS H+HIFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQSIKVNWAYTRGQ--REDTSGHFHIFVGDLSPEVTDATLYACFSAYSSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI + G+WLGSR IR NW+T K M E
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWAT-KGANMNGE 216
Query: 183 RKRQNSHTKTI------TFDEVYNQSS-------PTNCTVYCGGFGKDLNEELVSKVFSP 229
Q+S +K++ T +E +S P TVY G ++ + F
Sbjct: 217 --NQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHA 274
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
GTI D+RV ++KG+ FV+++T A AI+ + + G +KC WG + T +
Sbjct: 275 LGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSKPTPPGTAS 334
Query: 288 QPSAP 292
P P
Sbjct: 335 TPLPP 339
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + +SI+ NW+ + +R+ + H
Sbjct: 94 SSAAIAIVTLNGRNIFGQSIKVNWAYTR-----GQREDTSGHFH---------------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESEN 282
+ + ++C W + N
Sbjct: 192 LTGKWLGSRQIRCNWATKGAN 212
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 175/323 (54%), Gaps = 26/323 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN++ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 124
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 125 IMTLHGRHVYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 182
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ + E
Sbjct: 183 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN---NSEE 239
Query: 183 RKRQNSHTKTITFDEVYN----------------QSSPTNCTVYCGGFGKDLNEELVSKV 226
+ ++H + + N Q++P TVY G G ++N + + +
Sbjct: 240 KPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELHRH 299
Query: 227 FSPFGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F G I ++RV ++KG+ FV+++T A AI+ + + + G +KC WG +
Sbjct: 300 FYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPTPPG 359
Query: 285 TLAQPSAP--TTPQPNSTAPQFP 305
T ++P P T QP P P
Sbjct: 360 TGSKPLPPPAATYQPAVAMPGVP 382
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG+++P + L E F G + C+++R ++ + F
Sbjct: 57 SNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS----SFGF 112
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 113 VDYYDRRSAALAIMTLHGRHVYGQAIKVNWAY-----ASTQREDTSGHFH---------- 157
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 158 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 210
Query: 256 THAIESIHNTDINGHTVKCFWGKESENNS 284
AI + + ++C W ++NNS
Sbjct: 211 ETAITEMTGKWLGSRQIRCNWA--TKNNS 237
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 167/292 (57%), Gaps = 21/292 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+GCK+IR+ Y F+ + AA A
Sbjct: 53 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKE-KSSYGFIHYFDRRAAALA 111
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 112 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLYACFSVYPSC 169
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+ + A +N+
Sbjct: 170 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAAKG--ASSND 227
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K Q+S +K++ E N +P N TVY G ++ + + + F
Sbjct: 228 DK-QSSDSKSVVELTNGTSEDCKEATNNEAPENNPQYTTVYVGNLAPEVAQPDLHRHFHA 286
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G I ++RV ++KG+ FV+F+T A AI+ + + G +KC WG +
Sbjct: 287 LGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSLFGKQMKCSWGSK 338
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + C+++R ++ Y F+ + +
Sbjct: 50 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKS----SYGFIHYFDR 105
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 106 RAAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 144
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 145 -IFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 203
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + +++ Q S
Sbjct: 204 LTGKWLGSRQIRCNWAAKGASSNDDKQSS 232
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVA 59
E LY+G LD VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 88 EPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEYDDPGAA 147
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ F
Sbjct: 148 ERAMQTLNGRRIHQSEIRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 207
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP-- 177
G +S R++ D +T +S+GY FV+F + +AE A+ +M+ +WLGSR+IR NW+ +K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPS 267
Query: 178 ----------AMTNERKRQNSHTKTI---TFDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
MT + H T ++D V Q+ T Y G + +
Sbjct: 268 ISQQQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+F FG +V+ R+ ++G+AF+K T E A AI ++ +NG +KC WGK+
Sbjct: 328 PLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 382
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 22/306 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS GPV+GCK+IR+ Y F+ + AA A
Sbjct: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKD-KSSYGFIHYFDRRSAALA 110
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 111 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHYNIFVGDLSPEVTDATLFACFSVYPSC 168
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+++I + G+WLGSR IR NW+T+ A NE
Sbjct: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATKG--AGGNE 226
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K QNS K++ E N +P N TVY G ++ + + + F
Sbjct: 227 EK-QNSDAKSVVELTNGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHA 285
Query: 230 FGTIV--DIRVFKEKGYAFVKFTTKETATHAIESIH-NTDINGHTVKCFWGKESENNSTL 286
G V ++RV ++KG+ FV+++T A AI+ + + + G +KC WG + T
Sbjct: 286 LGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPTPPGTA 345
Query: 287 AQPSAP 292
+ P P
Sbjct: 346 SNPLPP 351
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 38/209 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKS----SYGFIHYFDR 104
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 105 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------YN------- 143
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A +I
Sbjct: 144 -IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSIND 202
Query: 262 IHNTDINGHTVKCFW------GKESENNS 284
+ + ++C W G E + NS
Sbjct: 203 LTGKWLGSRQIRCNWATKGAGGNEEKQNS 231
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 19/289 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP----YAFLEFVHHTVAATALAA 65
LY+G LD VTE++L +F G V+ K+I + Y F+E+ A A+
Sbjct: 93 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEYDDPGAAERAMQT 152
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S
Sbjct: 153 LNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 212
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D +T +S+GY FV+F + +AE A+ +M+ +WLGSR+IR NW+ +K ++++
Sbjct: 213 RVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQQQA 272
Query: 186 QNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
+ T T +D V Q+ T Y G + + +F F
Sbjct: 273 MAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 332
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G +V+ R+ ++G+AF+K T E A AI ++ +NG +KC WGK+
Sbjct: 333 GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 381
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 187/380 (49%), Gaps = 51/380 (13%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E LYVG L+ VTE++L +F G V+ K+I + Y F+E+ A
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 139
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A++ +N R +E++VNWA K+DTS+H+HIFVGDLS E+ L +AF+ FG
Sbjct: 140 AMSTLNGR----REIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGT 195
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMT 180
+S R++ D +T +++GY FV+F +++AE A+++M+G+WLGSR+IR NW+ +K P++
Sbjct: 196 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 255
Query: 181 NERKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ Q T +D V NQ+ T Y G V +
Sbjct: 256 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 315
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS-- 284
F FG +V+ R ++G+AF+K + E A AI ++ ++NG +KC WGK+ N+
Sbjct: 316 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 375
Query: 285 ----TLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLG 340
QP +P + Q P FP T PQ QYG G
Sbjct: 376 NFDPAHQQPYSPQSAQ----TPGFP------------------GTPTYYPQYGTQYG--G 411
Query: 341 YPQGYVGMVGRQVPGWQGIP 360
P + G G G+ G P
Sbjct: 412 QPGNFAGPQGGSPAGYGGSP 431
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 175/314 (55%), Gaps = 28/314 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F IGPV+GCK++R+ Y F+ + AA A
Sbjct: 48 DASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKE-KSSYGFVHYFDRRSAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDLSPE+ L F+ +
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA+NAI + G+WLGSR IR NW+ + A NE
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKG--AGVNE 222
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K Q S TK++ E N +P N TVY G ++++ + + F
Sbjct: 223 DK-QGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHS 281
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE----SE 281
G I ++R+ ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 282 LGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQ-MGNTRSFLCGRQIKCSWGSKPTPPGT 340
Query: 282 NNSTLAQPSAPTTP 295
++ L P+ +TP
Sbjct: 341 TSNPLPLPAVASTP 354
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E F G + C++VR ++ Y FV + +
Sbjct: 45 PGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKS----SYGFVHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ +++R+ + H +N
Sbjct: 101 RSAALAILSLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + + D RV + +G+ FV F ++ A +AI
Sbjct: 140 -IFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAIND 198
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 199 LTGKWLGSRQIRCNW 213
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 14/288 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V VTE LL +F G V+GCK+IR+ Y F+++ AA A
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKE-KSSYGFVDYYDRRSAALA 118
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N + + ++VNWA + G ++DT++H++IFVGDLSPE+ L F+ +
Sbjct: 119 ILTLNGKQIFGQLIRVNWAYASGQ--REDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSC 176
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP---AM 179
S+ R++ D +T +S+GY FVSF + +A++AI +NGQWLGSR IR NW+T+
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQ 236
Query: 180 TNERKRQNSHTKTITFD--EVYNQSSPTNC----TVYCGGFGKDLNEELVSKVFSPF--G 231
T++ K T +T D E N+ P N TVY G ++ ++++ ++F G
Sbjct: 237 TSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAG 296
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I ++R+ KG+ FV++++ A AI+ + + G +KC WG +
Sbjct: 297 AIEEVRIQLGKGFGFVRYSSHTEAALAIQMGNGRILGGKPIKCSWGNK 344
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 32/202 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ ++ L+E F G + C+++R ++ Y FV + +
Sbjct: 57 PGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKS----SYGFVDYYDR 112
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ + + IR NW+ + +R+ H +N
Sbjct: 113 RSAALAILTLNGKQIFGQLIRVNWAY-----ASGQREDTTDH---------FN------- 151
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +GY FV F ++ A AI
Sbjct: 152 -IFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIND 210
Query: 262 IHNTDINGHTVKCFWGKESENN 283
++ + ++C W + +N
Sbjct: 211 LNGQWLGSRQIRCNWATKGASN 232
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 175/314 (55%), Gaps = 28/314 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F IGPV+GCK++R+ Y F+ + AA A
Sbjct: 20 DASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKE-KSSYGFVHYFDRRSAALA 78
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDLSPE+ L F+ +
Sbjct: 79 ILSLNGRHLFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSC 136
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA+NAI + G+WLGSR IR NW+ + A NE
Sbjct: 137 SDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKG--AGVNE 194
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K Q S TK++ E N +P N TVY G ++++ + + F
Sbjct: 195 DK-QGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHS 253
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE----SE 281
G I ++R+ ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 254 LGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQ-MGNTRSFLCGRQIKCSWGSKPTPPGT 312
Query: 282 NNSTLAQPSAPTTP 295
++ L P+ +TP
Sbjct: 313 TSNPLPLPAVASTP 326
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E F G + C++VR ++ Y FV + +
Sbjct: 17 PGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKS----SYGFVHYFDR 72
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ +++R+ + H +N
Sbjct: 73 RSAALAILSLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 111
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + + D RV + +G+ FV F ++ A +AI
Sbjct: 112 -IFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAIND 170
Query: 262 IHNTDINGHTVKCFW 276
+ + ++C W
Sbjct: 171 LTGKWLGSRQIRCNW 185
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 18/244 (7%)
Query: 54 VHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
+H T + LA + L++ ++ AS P + + DTS H+H+FVGDLS ++ + LK
Sbjct: 94 IHSTSTDSHLA---NAILLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLK 150
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
F +GE+S +++RD QT KSKGY FVSF K AENAI MNG+W+G R++RTNW+
Sbjct: 151 STFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAA 210
Query: 174 RKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
RK +E R +TF++V+N + N +VY G + E + + FS +G I
Sbjct: 211 RK----NSEENRDK-----LTFEQVFNSTKADNTSVYVGNISQQTTETDLRESFSTYGDI 261
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
++RVFK + YAFV++ KE AT AI ++ ++ G+ V+C WG+ T A PS
Sbjct: 262 AEVRVFKTQRYAFVRYDKKECATKAIMEMNGKELTGNQVRCSWGR------TQAVPSQAL 315
Query: 294 TPQP 297
P P
Sbjct: 316 NPLP 319
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 20/183 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L V+ ELL + F + G V KVIR+ + Y F+ F + A
Sbjct: 128 DTSKHFHVFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNA 187
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQD-----------TSNHYHIFVGDLSPEIE 108
A+A MN + ++ ++ NWA+ ++ +D +++ ++VG++S +
Sbjct: 188 ENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT 247
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L+E+F+ +G+I+ R+ K++ YAFV + KK A AI MNG+ L +R
Sbjct: 248 ETDLRESFSTYGDIAEVRV------FKTQRYAFVRYDKKECATKAIMEMNGKELTGNQVR 301
Query: 169 TNW 171
+W
Sbjct: 302 CSW 304
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 183/352 (51%), Gaps = 47/352 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS GP++GCK+IR+ Y F+++ AA +
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKE-KSSYGFVDYFDRRSAALS 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF--- 119
+ +N R + +KVNWA + + ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 108 IVTLNGRHLFGQPIKVNWAYA--SSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSC 165
Query: 120 -GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
I + R++ D +T +S+G+ FVSF + EA++AI +NG+WLGSR IR NW+T+ A
Sbjct: 166 SSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKG--A 223
Query: 179 MTNERKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSK 225
NE K NS K++ + N +P N TVY G ++ + +
Sbjct: 224 GGNEDK-PNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHR 282
Query: 226 VFSPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F G I D+RV ++KG+ FV+++T A AI+ + + G +KC WG +
Sbjct: 283 HFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPTPA 342
Query: 284 STLAQPSAPTTPQPNSTAPQFPYI-------YNQQM---------GYWYPQA 319
T +TP P AP P I Y +QM G +PQA
Sbjct: 343 GT------SSTPLPPPAAPHMPGISAADFAAYERQMALSKMGGAQGLMHPQA 388
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 42/213 (19%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 46 PGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS----SYGFVDYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I +NG+ L + I+ NW+ +++R+ + H YN
Sbjct: 102 RSAALSIVTLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------YN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGT----IVDIRVF------KEKGYAFVKFTTKETATH 257
++ G ++ + + FS + + I D RV + +G+ FV F ++ A
Sbjct: 141 -IFVGDLSPEVTDATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQS 199
Query: 258 AIESIHNTDINGHTVKCFW------GKESENNS 284
AI ++ + ++C W G E + NS
Sbjct: 200 AINDLNGRWLGSRQIRCNWATKGAGGNEDKPNS 232
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 166/287 (57%), Gaps = 13/287 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYYDRRYAALA 128
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + P++DTS H++IFVGDL PE+ TL F+ +
Sbjct: 129 ILSLNGRQLYGQPIKVNWAYT--STPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 186
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+T+ A +
Sbjct: 187 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEK 246
Query: 183 R----KRQNSHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GT 232
+ K S+ + + E N+ P N TVY G + V F G+
Sbjct: 247 QILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGS 306
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I ++RV ++KG+ FV+++T E A AI+ + I G +KC WG +
Sbjct: 307 IEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSK 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 67 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYYDR 122
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ P R+ + H +N
Sbjct: 123 RYAALAILSLNGRQLYGQPIKVNWAYTSTP-----REDTSGH---------FN------- 161
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 162 -IFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 220
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 221 LNGKWLGNRQIRCNWATKGAN 241
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 175/319 (54%), Gaps = 30/319 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D + ++YVGN+ VTE LL +FS G ++GCK+IR+ + Y F+++ AA +
Sbjct: 39 DSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSS-YGFVDYFDRRSAALS 97
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS H++IFVGDLSPE+ TL +FA F
Sbjct: 98 IVTLNGRHLFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPSC 155
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+NAI +NG+W+GSR IR NW+ + T+
Sbjct: 156 SDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAK---GTTSN 212
Query: 183 RKRQNSHTKTITFDEVYNQSS--------------PTNCTVYCGGFGKDLNEELVSKVFS 228
+Q+S K++ E+ N +S P TVY G ++ + + F
Sbjct: 213 DDKQSSDAKSVV--ELTNGTSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFY 270
Query: 229 PF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
GTI D+RV ++KG+ FV+++T A AI+ + + G VKC WG S
Sbjct: 271 GLGAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILYGKPVKCSWG------SKP 324
Query: 287 AQPSAPTTPQPNSTAPQFP 305
P +TP P A + P
Sbjct: 325 TPPGTSSTPLPPPAAVRMP 343
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 48/268 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D++ ++VG++ P++ L+E F+ G I C+++R ++ Y FV + +
Sbjct: 36 PGFDSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKS----SYGFVDYFDR 91
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I +NG+ L + I+ NW+ +++R+ + H +N
Sbjct: 92 RSAALSIVTLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 130
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + F+ F + D RV + +G+ FV F ++ A +AI
Sbjct: 131 -IFVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINE 189
Query: 262 IHNTDINGHTVKCFWG---------KESENNSTLAQPSAPTTP---QPNSTAPQFPYIYN 309
++ I ++C W K+S + ++ + + T+ + N AP+ N
Sbjct: 190 LNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELTNGTSEDSQEKNDDAPE----NN 245
Query: 310 QQMGYWYPQAAAYTATAAQLPQQFYQYG 337
Q Y A T+ L + FY G
Sbjct: 246 PQYTTVYVGNLAPEVTSVDLHRHFYGLG 273
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 165/288 (57%), Gaps = 14/288 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V VTE LL +F G V+GCK+IR+ Y F+++ AA +
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKE-KSSYGFVDYYDRRSAALS 118
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N + + ++VNWA + G ++DT++H++IFVGDLSPE+ L F+ +
Sbjct: 119 ILTLNGKQIFGQLIRVNWAYASGQ--REDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSC 176
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP---AM 179
S+ R++ D +T +S+GY FVSF + +A++AI +NGQWLGSR IR NW+T+
Sbjct: 177 SDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQ 236
Query: 180 TNERKRQNSHTKTITFD--EVYNQSSPTNC----TVYCGGFGKDLNEELVSKVFSPF--G 231
T++ K T +T D E N+ +P N TVY G ++ ++++ ++F G
Sbjct: 237 TSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAG 296
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I ++R+ KG+ FV+++ A AI+ + + G +KC WG +
Sbjct: 297 AIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNK 344
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ ++ L+E F G + C+++R ++ Y FV + +
Sbjct: 57 PGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKS----SYGFVDYYDR 112
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I +NG+ + + IR NW+ + +R+ H
Sbjct: 113 RSAALSILTLNGKQIFGQLIRVNWAY-----ASGQREDTTDH-----------------F 150
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +GY FV F ++ A AI
Sbjct: 151 NIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIND 210
Query: 262 IHNTDINGHTVKCFWGKESENN 283
++ + ++C W + +N
Sbjct: 211 LNGQWLGSRQIRCNWATKGASN 232
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 187/357 (52%), Gaps = 26/357 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ +VTE LL +F GPV+ CK+IR+ + F+++ AA A
Sbjct: 68 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKE-KSSFGFVDYYDRRSAALA 126
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 127 IMTLHGRHIYGQAIKVNWAFA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSC 184
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK---TNAEE 241
Query: 183 RKRQNSHTKTI----------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ ++H + T + +++P TVY G G ++N + + +
Sbjct: 242 KQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 301
Query: 227 FSPFGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F G I ++RV +EKG+ F++++T A AI+ + + G +KC WG +
Sbjct: 302 FYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGNKPTPPG 361
Query: 285 TLAQPSAP--TTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
T ++P P + QP + A ++ + Q A A A Q+ Q GQ+
Sbjct: 362 TSSKPLPPPIASYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQV 418
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG++ P + L E F G + C+++R ++ + F
Sbjct: 59 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGF 114
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ F +
Sbjct: 115 VDYYDRRSAALAIMTLHGRHIYGQAIKVNWA----------------------FASTQRE 152
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
+ + ++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 153 DTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 212
Query: 256 THAIESIHNTDINGHTVKCFW 276
AI + + ++C W
Sbjct: 213 ETAITEMTGKWLGSRQIRCNW 233
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 166/294 (56%), Gaps = 24/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+ CK+IR+ Y F+ + AA A
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKE-KSSYGFIHYFDRRSAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHYNIFVGDLSPEVTDATLFACFSVYHSC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ T+
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK---GATSN 221
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
+Q+S K++ E N +P N TVY G ++ + + + F
Sbjct: 222 DDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHS 281
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV+F+T A AI+ + NT + G +KC WG +
Sbjct: 282 LGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQ-MGNTQSILYGKQIKCSWGSK 334
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + +C+++R ++ Y F+ + +
Sbjct: 45 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKS----SYGFIHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 101 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------YN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 140 -IFVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 198
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + ++ Q S
Sbjct: 199 LTGKWLGSRQIRCNWATKGATSNDDKQSS 227
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 166/292 (56%), Gaps = 20/292 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+GCK+IR+ Y F+ + AA A
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKE-KSSYGFIHYFDRRAAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLYACFSVYPSC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+++ A +NE
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWASKG--AGSNE 222
Query: 183 RKRQNSHTKTITFD--------EVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF 230
K+ + + E N +P N TVY G ++ + ++ + F
Sbjct: 223 DKQSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVYVGNLSPEVTQPVLHRHFHVL 282
Query: 231 --GTIVDIRVFKEKGYAFVKFTTKETATHAIESIH-NTDINGHTVKCFWGKE 279
G I ++RV ++KG+ FV+F+T A AI+ + + + G +KC WG +
Sbjct: 283 GAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQMGNAQSLLCGKQIKCSWGSK 334
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + C+++R ++ Y F+ + +
Sbjct: 45 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKS----SYGFIHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 101 RAAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 140 -IFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 198
Query: 262 IHNTDINGHTVKCFWG---------KESENNSTLAQPSAPTTPQ----PNSTAPQ 303
+ + ++C W K+S ++ ++ + + T+ PN+ AP+
Sbjct: 199 LTGKWLGSRQIRCNWASKGAGSNEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPE 253
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 26/295 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+GCK+ R+ Y F+ + AA A
Sbjct: 37 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKE-KSSYGFIHYFDRRSAALA 95
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 96 ILTLNGRHLFGQPIKVNWAYASGQ--REDTSGHYNIFVGDLSPEVTDATLFACFSVYQSC 153
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ +
Sbjct: 154 SDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKVAGGI--- 210
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QNS +K++ E+ N SS P TVY G G + + + + F
Sbjct: 211 EEKQNSDSKSVV--ELTNGSSEDGKEISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHF 268
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIH-NTDINGHTVKCFWGKE 279
G I ++RV ++KG+ FV+++T A AI+ + + + G +KC WG +
Sbjct: 269 HALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSK 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + C++ R ++ Y F+ + +
Sbjct: 34 PGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKS----SYGFIHYFDR 89
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 90 RSAALAILTLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------YN------- 128
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F +++ A AI
Sbjct: 129 -IFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAIND 187
Query: 262 IHNTDINGHTVKCFW------GKESENNS 284
+ + ++C W G E + NS
Sbjct: 188 LTGKWLGSRQIRCNWATKVAGGIEEKQNS 216
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 26/295 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+GCK+ R+ Y F+ + AA A
Sbjct: 19 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKE-KSSYGFIHYFDRRSAALA 77
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 78 ILTLNGRHLFGQPIKVNWAYASGQ--REDTSGHYNIFVGDLSPEVTDATLFACFSVYQSC 135
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ +
Sbjct: 136 SDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGI--- 192
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QNS +K++ E+ N SS P TVY G G + + + + F
Sbjct: 193 EEKQNSDSKSVV--ELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHF 250
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIH-NTDINGHTVKCFWGKE 279
G I ++RV ++KG+ FV+++T A AI+ + + + G +KC WG +
Sbjct: 251 HALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSK 305
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + C++ R ++ Y F+ + +
Sbjct: 16 PGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKS----SYGFIHYFDR 71
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 72 RSAALAILTLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------YN------- 110
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F +++ A AI
Sbjct: 111 -IFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAIND 169
Query: 262 IHNTDINGHTVKCFW------GKESENNS 284
+ + ++C W G E + NS
Sbjct: 170 LTGKWLGSRQIRCNWATKGAGGIEEKQNS 198
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 143/244 (58%), Gaps = 18/244 (7%)
Query: 54 VHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
+H T + LA + L++ ++ AS P + + DTS H+H+FVGDLS ++ + LK
Sbjct: 186 IHSTSTDSHLA---NAIVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLK 242
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
F FGE+S +++RD QT KSKGY FVSF K AENAI MNG+W+G R++RTNW+
Sbjct: 243 STFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAA 302
Query: 174 RKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
RK +E R +TF++V+N + N +VY G + + + +FS +G I
Sbjct: 303 RK----NSEENRDK-----LTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDI 353
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
++R+FK + YAFV++ KE AT AI ++ ++ G+ V+C WG+ T A P+
Sbjct: 354 AEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGR------TQAVPNQAL 407
Query: 294 TPQP 297
P P
Sbjct: 408 NPLP 411
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 20/183 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVA 59
D S+ ++VG+L V+ ELL + F++ G V KVIR+ + Y F+ F + A
Sbjct: 220 DTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNA 279
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQD-----------TSNHYHIFVGDLSPEIE 108
A+A MN + ++ ++ NWA+ ++ +D +++ ++VG++S +
Sbjct: 280 ENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT 339
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L++ F+ +G+I+ RI K++ YAFV + KK A AI MNG+ + +R
Sbjct: 340 DADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVR 393
Query: 169 TNW 171
+W
Sbjct: 394 CSW 396
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 196/393 (49%), Gaps = 42/393 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VT+ LL LFS G ++GCK+IR+ Y F+++ + AA A
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKE-KSSYGFVDYFDRSSAAFA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASA---S 214
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++Q S ++++ E+ N SS P TVY G ++ + + F
Sbjct: 215 DEKQTSDSRSVV--ELTNGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHF 272
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
GTI D+RV ++KG+ FV+++T A AI+ + + G +KC WG S
Sbjct: 273 HSLNAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWG------SK 326
Query: 286 LAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
P +TP P T+ + + Q A A +Q GQ Q
Sbjct: 327 PTPPGTASTPLPPPTSANVSGFSLASLAAYERQMALSKMGGAH--ALMHQQGQHALKQVA 384
Query: 346 VGMVGRQVPGWQGIPGAQPTAQQMAVAQAQPSM 378
+GM G PGA A+ VA Q M
Sbjct: 385 MGM---------GAPGAGYDARFQNVATTQHLM 408
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + + I+ NW+ +++R+ + H +N
Sbjct: 94 SSAAFAIVTLNGRNIFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + + S Q S
Sbjct: 192 LTGKWLGSRQIRCNWATKGASASDEKQTS 220
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 169/308 (54%), Gaps = 24/308 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN++ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 67 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 125
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 126 IMTLHGRHVYGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 183
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AI M G+WLGSR IR NW+T+ + E
Sbjct: 184 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNWATKN---NSEE 240
Query: 183 RKRQNSHTKTITFDEVYN----------------QSSPTNCTVYCGGFGKDLNEELVSKV 226
+ ++H + + N Q++P TVY G G ++N + + +
Sbjct: 241 KPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELHRH 300
Query: 227 FSPFGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F G I ++RV ++KG+ FV+++T A AI+ + + + G +KC WG +
Sbjct: 301 FYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPTPPG 360
Query: 285 TLAQPSAP 292
T ++P P
Sbjct: 361 TGSKPLPP 368
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG+++P + L E F G + C+++R ++ + F
Sbjct: 58 SNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS----SFGF 113
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 114 VDYYDRRSAALAIMTLHGRHVYGQAIKVNWAY-----ASTQREDTSGHFH---------- 158
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 159 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 211
Query: 256 THAIESIHNTDINGHTVKCFWGKESENNS 284
AI + + ++C W ++NNS
Sbjct: 212 ETAIAEMTGKWLGSRQIRCNWA--TKNNS 238
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 157/294 (53%), Gaps = 19/294 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
LYVGNL VT+ +L +FS +G V K+I++ + Y F++F+ H A AL +
Sbjct: 23 ALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAADMALQS 82
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N RV +E++VNWA ++D+++ + IFVGDL+ +I + L EAF G ++
Sbjct: 83 LNGRVLHGQELRVNWAFQ--KDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG-CADA 139
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D T +SKGY FVSF +A+AE A++ M+G LGSR IR W+ + K+
Sbjct: 140 RVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWA---------QHKQ 190
Query: 186 QNSHTKTITFDEVYN----QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+NS D V Q+ P N VY G D+++ + S FG ++D++++++
Sbjct: 191 ENSQASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYRK 250
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
GYAF +F + A AI + ++ G +KC WG+ P P
Sbjct: 251 GGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARKGGPGGAQLPVDP 304
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 41/195 (21%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D + ++VG+L + ++LLC F G +V+ R G Y F+ F
Sbjct: 106 DSASQFQIFVGDLASDINDKLLCEAFQSCGCAD-ARVMWDHNTGRSKG---YGFVSFKTR 161
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------------NHY 96
A AL+ M+ + + ++ WA Q KQ+ S +
Sbjct: 162 ADAEQALSQMSGTMLGSRRIRCGWA-----QHKQENSQASFAAVDRVSTLSRAQADPENA 216
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
+++VG+L+P++ L+ A + FG + + +I R GYAF F A+A AI
Sbjct: 217 NVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYR------KGGYAFAQFASHADAVRAIVG 270
Query: 157 MNGQWLGSRSIRTNW 171
++GQ LG ++++ +W
Sbjct: 271 LSGQNLGGKALKCSW 285
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 49/308 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAA 65
LYVGNL VT+ +L +F+ GPV K+I++ Y F+E++ A A+
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQT 85
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N R + E+K N K+DT +H+H+FVGDLSPE+ L +AF FG +S
Sbjct: 86 LNGRKIFDAEVKQN---------KEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEA 136
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+GY F+SF K+ +AE AI MNG+WLGSR+IR NW+ +K T
Sbjct: 137 RVMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQK--TQTGSSGA 194
Query: 186 QNSHTKTITFDEVYNQSS----------------------------------PTNCTVYC 211
+S + T Y Q + P NCT++
Sbjct: 195 YSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVIPGVPPAGGVPAASATPVIPDNCTLFV 254
Query: 212 GGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
G G + + ++ +F +G + DIR+ ++GYAFVK T + A A+ ++ NT + G
Sbjct: 255 GNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNTMVQGRP 314
Query: 272 VKCFWGKE 279
+K WG+E
Sbjct: 315 LKIQWGRE 322
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAI 154
H++VG+LSP + L E FA G + N +I++D + + G Y FV ++ AE AI
Sbjct: 25 HLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQD-RNFQHAGFNYGFVEYIDMRSAEQAI 83
Query: 155 TAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+NG+ + ++ N E + + H V+ G
Sbjct: 84 QTLNGRKIFDAEVKQN----------KEDTQHHHH-------------------VFVGDL 114
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++N+++++K F FG++ + RV K +GY F+ F +E A AI +++ +
Sbjct: 115 SPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLG 174
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPN 298
++ W + + S+P+ P+
Sbjct: 175 SRAIRVNWANQKTQTGSSGAYSSPSYTAPS 204
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 82/222 (36%), Gaps = 61/222 (27%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L V +++L F G + +V+ + + Y FL F A A+ M
Sbjct: 109 VFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTM 168
Query: 67 NKRVFLEKEMKVNWA------------SSP-------GNQPKQDTS-------------- 93
N + ++VNWA SSP G+ P+ +S
Sbjct: 169 NGEWLGSRAIRVNWANQKTQTGSSGAYSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVI 228
Query: 94 -------------------NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTL 134
++ +FVG+L P + L F +G +++ R+ D
Sbjct: 229 PGVPPAGGVPAASATPVIPDNCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQAD---- 284
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
+GYAFV A +A+ + + R ++ W KP
Sbjct: 285 --RGYAFVKLDTSQAAVSAMATLQNTMVQGRPLKIQWGREKP 324
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 176/327 (53%), Gaps = 30/327 (9%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVA---- 59
E LYVG LD VTE++L +F G V+ K+I + + A L +
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNDTITALLNLMTLVRLRGLC 146
Query: 60 --ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
+TA+ ++++ E++VNWA + K+DTS+H+HIFVGDLS E+ + L +AF+
Sbjct: 147 KPSTAVESISRYA----EIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFS 202
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG +S R++ D +T +S+GY FV+F ++A+AE A+ AM+G+WLGSR+IR NW+ +K
Sbjct: 203 AFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQ 262
Query: 178 AMTNERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEEL 222
++++ + T T +D V Q+ T Y G +
Sbjct: 263 PSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQND 322
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE- 281
+ +F FG +++ R+ ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 323 LVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 382
Query: 282 ----NNSTLAQPSAPTTPQPNSTAPQF 304
+N + QP++P P + PQ+
Sbjct: 383 TGQFDNFSGQQPNSPFNSNPATYFPQY 409
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 46/214 (21%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKV---IREPGNDPYAFLEFVHHTVA 59
D S ++VG+L V +E+L FS G V +V ++ + Y F+ F A
Sbjct: 176 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 235
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI------- 98
AL AM+ + ++ NWA+ G QP H+H
Sbjct: 236 EKALNAMDGEWLGSRAIRCNWANQKG-QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQS 294
Query: 99 ---------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
+VG+L+P L F FG + R+ D +G+AF+
Sbjct: 295 YDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIK 348
Query: 144 FVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
A AI +NG + R ++ +W +PP
Sbjct: 349 MDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 382
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 179/331 (54%), Gaps = 33/331 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VT+ LL LFS G ++GCK+IR+ Y F+++ + AA A
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKE-KSSYGFVDYFDRSSAAFA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASA---S 214
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++Q+S +K + E+ N SS P TVY G ++ + + F
Sbjct: 215 DEKQSSDSKIVV--ELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHF 272
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
G I D+RV ++KG+ FV+++T A AI+ + + G +KC WG + +
Sbjct: 273 HSLNAGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKP---TP 329
Query: 286 LAQPSAPTTPQPNSTAPQFPY----IYNQQM 312
L S P P P++ P F Y +QM
Sbjct: 330 LGTASTPLLP-PSANVPGFSLAGLAAYERQM 359
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + + I+ NW+ +++R+ + H +N
Sbjct: 94 SSAAFAIVTLNGRNIFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + + S Q S
Sbjct: 192 LTGKWLGSRQIRCNWATKGASASDEKQSS 220
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 179/331 (54%), Gaps = 33/331 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VT+ LL LFS G ++GCK+IR+ Y F+++ + AA A
Sbjct: 41 DSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKE-KSSYGFVDYFDRSSAAFA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQPIKVNWAYA--SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASA---S 214
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++Q+S +K + E+ N SS P TVY G ++ + + F
Sbjct: 215 DEKQSSDSKIVV--ELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHF 272
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
G I D+RV ++KG+ FV+++T A AI+ + + G +KC WG + +
Sbjct: 273 HSLNAGIIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKP---TP 329
Query: 286 LAQPSAPTTPQPNSTAPQFPY----IYNQQM 312
L S P P P++ P F Y +QM
Sbjct: 330 LGTASTPLLP-PSANVPGFSLAGLAAYERQM 359
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S+ ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + + I+ NW+ +++R+ + H +N
Sbjct: 94 SSAAFAIVTLNGRNIFGQPIKVNWAY-----ASSQREDTSGH---------FN------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + + S Q S
Sbjct: 192 LTGKWLGSRQIRCNWATKGASASDEKQSS 220
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 165/287 (57%), Gaps = 13/287 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYYDRRYAALA 128
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + P++DTS H++IFVGDL PE+ TL F+ +
Sbjct: 129 ILSLNGRQLYGQPIKVNWAYT--STPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 186
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+T+ A +
Sbjct: 187 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEK 246
Query: 183 R----KRQNSHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GT 232
+ K S+ + + E N P N TVY G + V F G+
Sbjct: 247 QILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGS 306
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I ++RV ++KG+ FV+++T E A AI+ + I G +KC WG +
Sbjct: 307 IEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGSK 353
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 67 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYYDR 122
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ P R+ + H +N
Sbjct: 123 RYAALAILSLNGRQLYGQPIKVNWAYTSTP-----REDTSGH---------FN------- 161
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 162 -IFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 220
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 221 LNGKWLGNRQIRCNWATKGAN 241
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 170/296 (57%), Gaps = 28/296 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL +F+ GPV+GCK++R+ Y F+ + AA A
Sbjct: 48 DSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKE-KSSYGFIHYFDRRSAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVFPSC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A +N+
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKG--AGSND 222
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
K Q+S K++ E+ N SS P TVY G ++ + + + F
Sbjct: 223 DK-QSSDAKSVV--ELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHF 279
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
F G I ++RV ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 280 HTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQ-MGNTQSILCGKPIKCSWGSK 334
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E FA G + C++VR ++ Y F+ + +
Sbjct: 45 PGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKS----SYGFIHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 101 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + +G+ FV F ++ A AI
Sbjct: 140 -IFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 198
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I + ++C W + ++ Q S
Sbjct: 199 ITGKWLGSRQIRCNWATKGAGSNDDKQSS 227
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 170/296 (57%), Gaps = 28/296 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL +F+ GPV+GCK++R+ Y F+ + AA A
Sbjct: 35 DSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKE-KSSYGFIHYFDRRSAALA 93
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 94 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVFPSC 151
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A +N+
Sbjct: 152 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATKG--AGSND 209
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
K Q+S K++ E+ N SS P TVY G ++ + + + F
Sbjct: 210 DK-QSSDAKSVV--ELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHF 266
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
F G I ++RV ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 267 HTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQ-MGNTQSILCGKPIKCSWGSK 321
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E FA G + C++VR ++ Y F+ + +
Sbjct: 32 PGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKS----SYGFIHYFDR 87
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 88 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 126
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + +G+ FV F ++ A AI
Sbjct: 127 -IFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 185
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I + ++C W + ++ Q S
Sbjct: 186 ITGKWLGSRQIRCNWATKGAGSNDDKQSS 214
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 126/199 (63%), Gaps = 6/199 (3%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PK DTS +YH+FVGDLS E+ TLK AF FGEIS +++RDPQTLKSKGY FVSF K
Sbjct: 13 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVK 72
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A+ AI MNGQ +G R IRTNW+ R+ + + K T+D ++N + N
Sbjct: 73 ENAQKAIEEMNGQMIGRRQIRTNWAVRRFDGG------EENAMKPPTYDNIFNATHAANT 126
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
+VY GG +E + + FS T++++R+FK++GYAFV++ K+ A AI S++ I
Sbjct: 127 SVYVGGISPVTTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMNGKVI 186
Query: 268 NGHTVKCFWGKESENNSTL 286
NG ++C W + + +N+ L
Sbjct: 187 NGQKIRCSWSRTAMDNNDL 205
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L V L A F G + KVIR+P + Y F+ F A
Sbjct: 16 DTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVKENA 75
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS---------NHYH-----IFVGDLSP 105
A+ MN ++ ++++ NWA + +++ N H ++VG +SP
Sbjct: 76 QKAIEEMNGQMIGRRQIRTNWAVRRFDGGEENAMKPPTYDNIFNATHAANTSVYVGGISP 135
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ L ++F+ + R+ K +GYAFV ++ K A AI +MNG+ + +
Sbjct: 136 VTTDEELMQSFSAIATVIEVRL------FKQQGYAFVRYLNKDAAARAIMSMNGKVINGQ 189
Query: 166 SIRTNWS 172
IR +WS
Sbjct: 190 KIRCSWS 196
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 125/199 (62%), Gaps = 6/199 (3%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PK +T+ ++H+FVGDL+ E+++ TLK AF FGEIS +++RDPQTLKSK Y FVSF K
Sbjct: 123 PKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVK 182
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
AE AI MNGQ +G R IRTNW+ R+ + K T+D ++N + TN
Sbjct: 183 ENAEKAIEKMNGQMIGRRPIRTNWAVRRFDG------GEEYAMKPPTYDNIFNATHATNT 236
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
+VY GG +E + + FS T+ ++R+FK++GYAFV++ TK+ AT AI +H +I
Sbjct: 237 SVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEI 296
Query: 268 NGHTVKCFWGKESENNSTL 286
NG +KC W + N +
Sbjct: 297 NGQKIKCSWSRTVTENKVI 315
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L V L A F G + KVIR+P + Y F+ F A A+ M
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 67 NKRVFLEKEMKVNWASS--PGNQ------PKQDT------SNHYHIFVGDLSPEIETQTL 112
N ++ + ++ NWA G + P D + + ++VG +SP + L
Sbjct: 193 NGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGISPATTDEEL 252
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+ F+ ++ R+ K +GYAFV ++ K A AI M+G+ + + I+ +WS
Sbjct: 253 MQPFSAIATVTEVRL------FKQQGYAFVRYLTKDAATRAIMFMHGKEINGQKIKCSWS 306
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 166/305 (54%), Gaps = 21/305 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+ CK+IR+ Y F+ + AA A
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRKD-KSSYGFIHYFDRRSAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHYNIFVGDLSPEVTDATLFACFSVYPTC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK---GAGGT 221
Query: 183 RKRQNSHTKTIT--------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF 230
++QNS K++ E N +P N TVY G + + + F
Sbjct: 222 EEKQNSDAKSVVELTYGSSDGKETSNSDAPENNPQYTTVYVGNLAPEATQLDLHHHFHSL 281
Query: 231 --GTIVDIRVFKEKGYAFVKFTTKETATHAIESIH-NTDINGHTVKCFWGKESENNSTLA 287
G I ++RV ++KG+ FV+++T A AI+ + + + G +KC WG + T +
Sbjct: 282 GAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKQIKCSWGSKPTPAGTAS 341
Query: 288 QPSAP 292
P P
Sbjct: 342 NPLPP 346
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 48/268 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + C+++R ++ Y F+ + +
Sbjct: 45 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRKDKS----SYGFIHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 101 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------YN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 140 -IFVGDLSPEVTDATLFACFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 198
Query: 262 IHNTDINGHTVKCFW------GKESENNST------LAQPSAPTTPQPNSTAPQFPYIYN 309
+ + ++C W G E + NS L S+ NS AP+ N
Sbjct: 199 LTGKWLGSRQIRCNWATKGAGGTEEKQNSDAKSVVELTYGSSDGKETSNSDAPE----NN 254
Query: 310 QQMGYWYPQAAAYTATAAQLPQQFYQYG 337
Q Y A AT L F+ G
Sbjct: 255 PQYTTVYVGNLAPEATQLDLHHHFHSLG 282
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 136/228 (59%), Gaps = 17/228 (7%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
PK +T+ ++H+FVGDL+ E+++ TLK AF FGEIS +++RDPQTLKSK Y FVSF K
Sbjct: 123 PKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVK 182
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
AE AI MNGQ +G R IRTNW+ R+ + K T+D ++N + TN
Sbjct: 183 ENAEKAIEKMNGQMIGRRPIRTNWAVRRFDG------GEEYAMKPPTYDNIFNATHATNT 236
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
+VY GG +E + + FS T+ ++R+FK++GYAFV++ TK+ AT AI +H +I
Sbjct: 237 SVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEI 296
Query: 268 NGHTVKCFWGKE-SENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGY 314
NG +KC W + +EN ++ N TA + N MG+
Sbjct: 297 NGQKIKCSWSRTVTENKINIS----------NQTASNVNLLTNSIMGF 334
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L V L A F G + KVIR+P + Y F+ F A A+ M
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 67 NKRVFLEKEMKVNWASS--PGNQ------PKQDT------SNHYHIFVGDLSPEIETQTL 112
N ++ + ++ NWA G + P D + + ++VG +SP + L
Sbjct: 193 NGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGISPATTDEEL 252
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+ F+ ++ R+ K +GYAFV ++ K A AI M+G+ + + I+ +WS
Sbjct: 253 MQPFSAIATVTEVRL------FKQQGYAFVRYLTKDAATRAIMFMHGKEINGQKIKCSWS 306
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 6/188 (3%)
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
+ N +HIFVGDL+PE++ +TL AF+ FG I+ C+I++D T K KGY FV++ + EAE
Sbjct: 29 SDNSFHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAE 88
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYC 211
AI MNGQ +G+R+IRTNW+ RK PA Q + + + EV+N SS TN T+Y
Sbjct: 89 RAIRIMNGQIIGTRAIRTNWAVRKDPA------DQAKDHRPLNYLEVFNASSSTNTTIYV 142
Query: 212 GGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
GG +L E+L+ F FG I +IR+FK+KG++F++F + AT AI ++H +
Sbjct: 143 GGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRFDSHVAATQAIVTMHGKIVGDQA 202
Query: 272 VKCFWGKE 279
KC WGKE
Sbjct: 203 CKCSWGKE 210
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L V +E L A FS G + CK+I++ Y F+ + A A+ M
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 67 NKRVFLEKEMKVNWA--SSPGNQPKQ------------DTSNHYHIFVGDLSPEIETQTL 112
N ++ + ++ NWA P +Q K +S + I+VG ++ E+ + L
Sbjct: 95 NGQIIGTRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSSTNTTIYVGGITNELTEKLL 154
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+++F FGEI RI +D KG++F+ F A AI M+G+ +G ++ + +W
Sbjct: 155 QDSFKQFGEIKEIRIFKD------KGFSFIRFDSHVAATQAIVTMHGKIVGDQACKCSWG 208
Query: 173 TRKPPAMTNER 183
K P TN++
Sbjct: 209 --KEPTFTNKQ 217
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALA 64
S TT+YVG + +TE+LL F Q G +K ++ ++ G ++F+ F H A A+
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKG---FSFIRFDSHVAATQAIV 191
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQ 90
M+ ++ ++ K +W P KQ
Sbjct: 192 TMHGKIVGDQACKCSWGKEPTFTNKQ 217
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 18/244 (7%)
Query: 54 VHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
+H T + LA + L++ ++ AS P + + DTS H+H+FVGDLS ++ LK
Sbjct: 153 IHSTSTDSHLA---NAIVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNDLLK 209
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
F +GE+S +++RD QT KSKGY FVSF K AENAI MNG+W+G R++RTNW+
Sbjct: 210 STFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAA 269
Query: 174 RKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
RK +E R +TF++V+N + N +VY G + + + FS +G I
Sbjct: 270 RK----NSEENRDK-----LTFEQVFNSTKADNTSVYVGNISQQTTDADLRDSFSTYGDI 320
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
++RVFK + YAFV++ KE AT AI ++ ++ G+ V+C WG+ T A P+
Sbjct: 321 AEVRVFKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVRCSWGR------TQAVPNQAL 374
Query: 294 TPQP 297
P P
Sbjct: 375 NPLP 378
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 20/183 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVA 59
D S+ ++VG+L V+ +LL + F + G V KVIR+ + Y F+ F + A
Sbjct: 187 DTSKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNA 246
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQD-----------TSNHYHIFVGDLSPEIE 108
A+A MN + ++ ++ NWA+ ++ +D +++ ++VG++S +
Sbjct: 247 ENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT 306
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L+++F+ +G+I+ R+ K++ YAFV + KK A AI MNG+ + +R
Sbjct: 307 DADLRDSFSTYGDIAEVRV------FKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVR 360
Query: 169 TNW 171
+W
Sbjct: 361 CSW 363
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 169/296 (57%), Gaps = 28/296 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL +F+ GPV+GCK++R+ Y F+ + AA A
Sbjct: 48 DSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKE-KSSYGFIHYFDRRSAALA 106
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 107 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDATLFACFSVFPSC 164
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + A++AI + G+WLGSR IR NW+T+ A +N+
Sbjct: 165 SDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGKWLGSRQIRCNWATKG--AGSND 222
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
K Q+S K++ E+ N SS P TVY G ++ + + + F
Sbjct: 223 DK-QSSDAKSVV--ELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLHRHF 279
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
F G I ++RV ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 280 HTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQ-MGNTQSILCGKPIKCSWGSK 334
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E FA G + C++VR ++ Y F+ + +
Sbjct: 45 PGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKS----SYGFIHYFDR 100
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 101 RSAALAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 139
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + +G+ FV F ++ A AI
Sbjct: 140 -IFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAIND 198
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I + ++C W + ++ Q S
Sbjct: 199 ITGKWLGSRQIRCNWATKGAGSNDDKQSS 227
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 194/388 (50%), Gaps = 46/388 (11%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V VTE LL +F +GP++GCK+I++ Y F+++ H AA +
Sbjct: 74 DSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKE-KSSYGFVDYYDHRSAANS 132
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N + + +KVNWA + G ++DT+ HY IFVGDLSPE+ L F+ +
Sbjct: 133 ILHLNGKQIYGQAIKVNWAYASGQ--REDTTGHYSIFVGDLSPEVTDAALFACFSIYPSC 190
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D ++ +S+G+ FVSF + +A+NAI M G+ LGSR IR NW+T+ ++
Sbjct: 191 SDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKTLGSRPIRCNWATKSSSGNQSD 250
Query: 183 RKRQN--------SHTKTITFDEVYN-----------------------QSSPTNCTVYC 211
K+ + S+ + +N +++P+ TVY
Sbjct: 251 DKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTGGQQKGGAQTSGPENNPSYTTVYI 310
Query: 212 GGFGKDLNEELVSKVFSPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
G ++ + + + F G I D+RV ++KG+ FV++ + E A AI+ + I G
Sbjct: 311 GNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVICG 370
Query: 270 HTVKCFWGKE----SENNSTLAQPSAPTTPQPNSTAPQ-FPYIYNQQMGYWYPQAAAYTA 324
++KC WG + +++ L PSAP APQ Y Y Q A
Sbjct: 371 KSIKCSWGSKPTPPGASSNALPPPSAPFQ---GVVAPQGLNQGYTAADILAYRQLNMSQA 427
Query: 325 TAAQ--LPQQFYQYGQLGYPQGYVGMVG 350
A Q LP Q LG G +G+VG
Sbjct: 428 GAGQPLLPLSAQQGMGLGLGHGPMGVVG 455
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++S + L E F G + C++++ ++ Y FV +
Sbjct: 71 PGFDSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKS----SYGFVDYYDH 126
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A N+I +NG+ + ++I+ NW+ + +R+ H
Sbjct: 127 RSAANSILHLNGKQIYGQAIKVNWAY-----ASGQREDTTGHY----------------- 164
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
+++ G ++ + + FS + + D RV + +G+ FV F ++ A +AI
Sbjct: 165 SIFVGDLSPEVTDAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQ 224
Query: 262 IHNTDINGHTVKCFWGKESEN 282
+ + ++C W +S +
Sbjct: 225 MTGKTLGSRPIRCNWATKSSS 245
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
+HIFVGDL+PE++ +TL AF+ FG I+ C+I++D T K KGY FV++ + EAE AI
Sbjct: 157 FHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIR 216
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
MNGQ +GSR+IRTNW+ RK PA Q + + + EV+N SS N T+Y GG
Sbjct: 217 IMNGQIIGSRAIRTNWAVRKDPA------DQAKDHRPLNYLEVFNASSAANTTIYVGGIT 270
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
+L E+L+ F FG I +IR+FK+KG++FV+F + AT AI ++H + KC
Sbjct: 271 NELTEKLLQDSFKQFGEIKEIRIFKDKGFSFVRFDSHVAATQAIVTMHGKIVGDQACKCS 330
Query: 276 WGKES--ENNSTLAQPSAPTTPQPN 298
WGKE N LA+ + T PN
Sbjct: 331 WGKEPTFTNKQVLAKRLSSTLLVPN 355
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 25/191 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L V +E L A FS G + CK+I++ Y F+ + A A+ M
Sbjct: 159 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 218
Query: 67 NKRVFLEKEMKVNWA--SSPGNQPKQDTSNHY------------HIFVGDLSPEIETQTL 112
N ++ + ++ NWA P +Q K +Y I+VG ++ E+ + L
Sbjct: 219 NGQIIGSRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSAANTTIYVGGITNELTEKLL 278
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+++F FGEI RI +D KG++FV F A AI M+G+ +G ++ + +W
Sbjct: 279 QDSFKQFGEIKEIRIFKD------KGFSFVRFDSHVAATQAIVTMHGKIVGDQACKCSWG 332
Query: 173 TRKPPAMTNER 183
K P TN++
Sbjct: 333 --KEPTFTNKQ 341
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+YVG + +TE+LL F Q G +K ++ ++ G ++F+ F H A A+ M+
Sbjct: 262 TTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKG---FSFVRFDSHVAATQAIVTMH 318
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ 90
++ ++ K +W P KQ
Sbjct: 319 GKIVGDQACKCSWGKEPTFTNKQ 341
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 162/292 (55%), Gaps = 20/292 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V VTE LL +F G V GCK+IR+ Y F+++ AA A
Sbjct: 56 DTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKE-KSSYGFVDYYERGSAALA 114
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG-E 121
+ +N + + ++VNWA + G ++DT++H+HIFVGDLSPE+ L F+ +
Sbjct: 115 ILTLNGKQIFGQPIRVNWAYASGQ--REDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPN 172
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
S+ R++ D +T +S+GY FVSF + +A++AI +NGQWLG+R IR NW+T+ A +
Sbjct: 173 CSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKG--ANSG 230
Query: 182 ERKRQNSHTKTITFDEVY--------NQSSPTNC----TVYCGGFGKDLNEELVSKVFSP 229
E + + + + + N+ +P N TVY G ++ ++++ + F
Sbjct: 231 EDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHA 290
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G I ++RV KG+ FVK++ AI++ + + G VKC WG +
Sbjct: 291 LGAGAIEEVRVQHGKGFGFVKYSNHAETALAIQTGNGRILGGKPVKCSWGNK 342
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P DTS ++VG++ ++ L+E F G + C+++R ++ Y FV + ++
Sbjct: 53 PGFDTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKS----SYGFVDYYER 108
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ + + IR NW+ + +R+ H
Sbjct: 109 GSAALAILTLNGKQIFGQPIRVNWAY-----ASGQREDTTDHFH---------------- 147
Query: 208 TVYCGGFGKDLNEELVSKVFSPFG-TIVDIRVF------KEKGYAFVKFTTKETATHAIE 260
++ G ++ + + FS + D RV + +GY FV F ++ A AI
Sbjct: 148 -IFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIN 206
Query: 261 SIHNTDINGHTVKCFWGKESENN 283
++ + ++C W + N+
Sbjct: 207 DLNGQWLGNRQIRCNWATKGANS 229
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 162/295 (54%), Gaps = 24/295 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ +VTE LL +F G V+ CK+IR+ + F+++ AA A
Sbjct: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKE-KSSFGFVDYYDRRSAALA 126
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + + ++DTS H+HIFVGDLS E+ TL F+ +
Sbjct: 127 IMTLHGRHICGQAIKVNWAYA--STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 184
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+GY FVSF + EAE AIT M G+WLGSR IR NW+T+ E
Sbjct: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNN---AEE 241
Query: 183 RKRQNSHTKTI----------------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
++ ++H + T + +++P TVY G G ++N + + +
Sbjct: 242 KQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRH 301
Query: 227 FSPFGT--IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
F G I ++RV ++KG+ FV+++ A AI+ + + G +KC WG +
Sbjct: 302 FYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNK 356
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 83 SPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
S GN P D S ++VG++ P + L E F G + C+++R ++ + F
Sbjct: 59 SNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKS----SFGF 114
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V + + A AI ++G+ + ++I+ NW+ + +R+ + H
Sbjct: 115 VDYYDRRSAALAIMTLHGRHICGQAIKVNWAY-----ASTQREDTSGHFH---------- 159
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
++ G ++N+ + FS + + D RV + +GY FV F ++ A
Sbjct: 160 -------IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEA 212
Query: 256 THAIESIHNTDINGHTVKCFW 276
AI + + ++C W
Sbjct: 213 ETAITEMTGKWLGSRQIRCNW 233
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 170/316 (53%), Gaps = 32/316 (10%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL LFS G ++GCK+IR+ + Y F+++ + AA A
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS-YGFVDYFDRSSAAIA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + G ++DTS H+HIFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQSIKVNWAYTRGQ--REDTSGHFHIFVGDLSPEVTDATLYACFSAYSSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI + G+WLGSR IR NW+T K M E
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWAT-KGANMNGE 216
Query: 183 RKRQNSHTKTI------TFDEVYNQSS-------PTNCTVYCGGFGKDLNEELVSKVFSP 229
Q+S +K++ T +E +S P TVY G ++ + F
Sbjct: 217 --NQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHA 274
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV-----------KCFW 276
GTI D+RV ++KG+ FV+++T A AI+ + + G + KC W
Sbjct: 275 LGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKMHITRKKAVSKCSW 334
Query: 277 GKESENNSTLAQPSAP 292
G + T + P P
Sbjct: 335 GSKPTPPGTASTPLPP 350
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + +SI+ NW+ + +R+ + H
Sbjct: 94 SSAAIAIVTLNGRNIFGQSIKVNWAYTR-----GQREDTSGHFH---------------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESEN 282
+ + ++C W + N
Sbjct: 192 LTGKWLGSRQIRCNWATKGAN 212
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 24/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F+ GPV+ CK+IR+ Y F+ + A A
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKE-KSSYGFVHYFDRRSAGLA 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ L F+ +
Sbjct: 108 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSSHFNIFVGDLSPEVTDAMLFNCFSVYPSC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI + G+WLGSR IR NW+T+ T+
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATK---GATSG 222
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
+Q+S +K++ + N +P N TVY G ++++ + + F
Sbjct: 223 EDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHS 282
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV+++T A AI S+ NT ++G +KC WG +
Sbjct: 283 LGAGVIEEVRVQRDKGFGFVRYSTHVEAALAI-SMGNTHSYLSGRQMKCSWGSK 335
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + +C+++R ++ Y FV + +
Sbjct: 46 PGFDPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKS----SYGFVHYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ +SH +N
Sbjct: 102 RSAGLAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSSH---------FN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + + D RV + +G+ FV F ++ A AI+
Sbjct: 141 -IFVGDLSPEVTDAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 262 IHNTDINGHTVKCFW 276
I + ++C W
Sbjct: 200 ITGKWLGSRQIRCNW 214
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 164/290 (56%), Gaps = 16/290 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V VTE +L +F G V+GCK+IR+ Y F+++ AA A
Sbjct: 57 DASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKE-KSSYGFVDYYERGSAALA 115
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE- 121
+ +N R + ++VNWA + G ++DT++H++IFVGDLS E+ L F+ +
Sbjct: 116 ILQLNGRQIFGQPIRVNWAYASGQ--REDTTDHFNIFVGDLSAEVTDSALFAFFSGYSSS 173
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM-- 179
S+ R++ D +T +S+GY FVSF + +A++AI +NGQWLG+R IR NW+T+ ++
Sbjct: 174 CSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSVED 233
Query: 180 --TNERKRQNSHTKTITFD--EVYNQSSPTNC----TVYCGGFGKDLNEELVSKVFSPF- 230
T++ K T T D E N+ +P N TVY G + ++++ + F
Sbjct: 234 QQTSDSKSIAGVTNNFTEDGKEKANEDAPENNPLYRTVYVGNLAHEATQDVLHRFFYALG 293
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G I ++RV KG+ FVK+++ A AI+ + + G +KC WG +
Sbjct: 294 AGAIEEVRVQHGKGFGFVKYSSHAEAALAIQMGNGCILGGKPIKCSWGNK 343
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ + L+E F G + C+++R ++ Y FV + ++
Sbjct: 54 PGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKS----SYGFVDYYER 109
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI +NG+ + + IR NW+ + +R+ H
Sbjct: 110 GSAALAILQLNGRQIFGQPIRVNWAY-----ASGQREDTTDH-----------------F 147
Query: 208 TVYCGGFGKDLNEELVSKVFSPF-GTIVDIRVF------KEKGYAFVKFTTKETATHAIE 260
++ G ++ + + FS + + D RV + +GY FV F ++ A AI
Sbjct: 148 NIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIN 207
Query: 261 SIHNTDINGHTVKCFWGKESENN 283
++ + ++C W + N+
Sbjct: 208 DLNGQWLGNRQIRCNWATKGANS 230
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 162/291 (55%), Gaps = 18/291 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+ K+IR+ Y F+ + AA A
Sbjct: 56 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKD-KSSYGFVHYFDRRSAALA 114
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ TL ++F+ F
Sbjct: 115 ILSLNGRHLFGQPIKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSC 172
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI MNG+WL SR IR NW+T+ + ++
Sbjct: 173 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDK 232
Query: 183 RKRQNSHTKTITF------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF-- 230
+T E N+ +P N TVY G ++ + + + F
Sbjct: 233 LSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGA 292
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T A AI+ + NT + +KC WG +
Sbjct: 293 GVIEEVRVQRDKGFGFVRYNTHPEAALAIQ-MGNTQPYLFNRQIKCSWGNK 342
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 168/291 (57%), Gaps = 21/291 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F+ GPV+ CK+IR+ Y F+ + A A
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKE-KSSYGFVHYFDRRSAGLA 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ L F+ +
Sbjct: 108 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI + G+WLGSR IR NW+T+ T+
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATK---GATSG 222
Query: 183 RKRQNSHTKTIT------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF-- 230
+Q+S +K++ + N +P N TVY G ++++ + + F
Sbjct: 223 EDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGA 282
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV+++T A AI+ + NT ++G +KC WG +
Sbjct: 283 GVIEEVRVQRDKGFGFVRYSTHVEAALAIQ-MGNTHSYLSGRQMKCSWGSK 332
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + +C+++R ++ Y FV + +
Sbjct: 46 PGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKS----SYGFVHYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ +SH +N
Sbjct: 102 RSAGLAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSSH---------FN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + T D RV + +G+ FV F ++ A AI+
Sbjct: 141 -IFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I + ++C W + + Q S
Sbjct: 200 ITGKWLGSRQIRCNWATKGATSGEDKQSS 228
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 162/291 (55%), Gaps = 18/291 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+ K+IR+ Y F+ + AA A
Sbjct: 54 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKD-KSSYGFVHYFDRRSAALA 112
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ TL ++F+ F
Sbjct: 113 ILSLNGRHLFGQPIKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSC 170
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI MNG+WL SR IR NW+T+ + ++
Sbjct: 171 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDK 230
Query: 183 RKRQNSHTKTITF------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF-- 230
+T E N+ +P N TVY G ++ + + + F
Sbjct: 231 LSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGA 290
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T A AI+ + NT + +KC WG +
Sbjct: 291 GVIEEVRVQRDKGFGFVRYNTHPEAALAIQ-MGNTQPYLFNRQIKCSWGNK 340
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 120/193 (62%), Gaps = 8/193 (4%)
Query: 89 KQDTSNH--YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q+ SN +HIFVGDL+P+IE L AF FG ++ C+I++D T K KGY FV++
Sbjct: 27 NQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAYKS 86
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
+ EAE AI MNGQ LGSR+IRTNW+ R+ PA Q + + + EV+N SS +N
Sbjct: 87 REEAERAIQVMNGQILGSRAIRTNWAVRRDPA------DQAKDHRPLNYVEVFNASSASN 140
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD 266
T+Y GG L E L+ F FG I +IR+FKEKG++F++F + AT AI ++H
Sbjct: 141 TTIYVGGITSGLTELLLQNAFQEFGEIKEIRIFKEKGFSFIRFDSHAAATRAIVTMHGRL 200
Query: 267 INGHTVKCFWGKE 279
+ + KC WGKE
Sbjct: 201 VGDQSCKCSWGKE 213
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L + ++L A F+ G V CK+I++ Y F+ + A A+ M
Sbjct: 38 IFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAYKSREEAERAIQVM 97
Query: 67 NKRVFLEKEMKVNWA--SSPGNQPKQ------------DTSNHYHIFVGDLSPEIETQTL 112
N ++ + ++ NWA P +Q K ++++ I+VG ++ + L
Sbjct: 98 NGQILGSRAIRTNWAVRRDPADQAKDHRPLNYVEVFNASSASNTTIYVGGITSGLTELLL 157
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
+ AF FGEI RI K KG++F+ F A A AI M+G+ +G +S + +W
Sbjct: 158 QNAFQEFGEIKEIRI------FKEKGFSFIRFDSHAAATRAIVTMHGRLVGDQSCKCSW 210
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+YVG + +TE LL F + G +K ++ +E G ++F+ F H A A+ M+
Sbjct: 141 TTIYVGGITSGLTELLLQNAFQEFGEIKEIRIFKEKG---FSFIRFDSHAAATRAIVTMH 197
Query: 68 KRVFLEKEMKVNWASSP 84
R+ ++ K +W P
Sbjct: 198 GRLVGDQSCKCSWGKEP 214
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 162/291 (55%), Gaps = 18/291 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F+ GPV+ K+IR+ Y F+ + AA A
Sbjct: 54 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKD-KSSYGFVHYFDRRSAALA 112
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ TL ++F+ F
Sbjct: 113 ILSLNGRHLFGQPIKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSC 170
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI MNG+WL SR IR NW+T+ + ++
Sbjct: 171 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDK 230
Query: 183 RKRQNSHTKTITF------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF-- 230
+T E N+ +P N TVY G ++ + + + F
Sbjct: 231 LSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGA 290
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T A AI+ + NT + +KC WG +
Sbjct: 291 GVIEEVRVQRDKGFGFVRYNTHPEAALAIQ-MGNTQPYLFNRQIKCSWGNK 340
>gi|294884880|gb|ADF47448.1| TIA1-like protein, partial [Dugesia japonica]
Length = 284
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 159/288 (55%), Gaps = 17/288 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAA 60
D T+YVGNL ++T+ LL +F G GC +IR+ +PYAF+E+ +H+ A+
Sbjct: 2 DIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAAS 61
Query: 61 TALAAMNKRVFLEKEMKVNW---------ASSPGNQPKQDTSNHYHIFVGDLSPEIETQT 111
ALAAM+ ++KVNW ASS + K D SN IFVGD+ +++
Sbjct: 62 LALAAMDGIFMWNNQIKVNWSSGNSVNTVASSLPSSNKIDYSNTIQIFVGDIGLDVDEAM 121
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
LKE F+ FG + + ++VR Q +S+G+AFV+F K+ +AE AI M+ W +R+I+ NW
Sbjct: 122 LKEGFSEFGPVVDAKVVR-YQDGQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNW 180
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+TR Q ++ VY ++ TN VY G + L EEL+ F FG
Sbjct: 181 ATRNGLD-----GDQFIKYTPRPYELVYKEAPLTNTNVYIAGIPEGLTEELIRVHFEEFG 235
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I ++V+ EK +AF+ F T E+A AI H IN + +KC WGKE
Sbjct: 236 RIDAVKVYPEKAHAFINFVTHESAARAISQRHGYKINDNVIKCNWGKE 283
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 167/294 (56%), Gaps = 24/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S +++VGN+ VTE LL +FS G V+GCK+IR+ Y F+ + AA A
Sbjct: 49 DPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKE-KSSYGFIHYYDRRSAALA 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ L F+ +
Sbjct: 108 IVSLNGRHLFGQPIKVNWAFASGQ--REDTSSHFNIFVGDLSPEVTDAMLFACFSVYPGC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A +N+
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG--ANSND 223
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K Q+S K++ E N +P N TVY G ++ + + + F
Sbjct: 224 DK-QSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTTVYVGNIAPEVTQLDLHRYFHA 282
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I +IR+ ++KG+ FV++ T A AI+ + NT + G +KC WG +
Sbjct: 283 LGAGVIEEIRIQRDKGFGFVRYNTHAEAALAIQ-MGNTHSVLGGRQIKCSWGNK 335
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S +FVG++ P++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 46 PGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKS----SYGFIHYYDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ +SH +N
Sbjct: 102 RSAALAIVSLNGRHLFGQPIKVNWAF-----ASGQREDTSSH---------FN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + D RV + +G+ FV F ++ A AI
Sbjct: 141 -IFVGDLSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
+ + ++C W + N++ Q S
Sbjct: 200 LTGKWLGSRQIRCNWATKGANSNDDKQSS 228
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 7 PTT---LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
PTT +Y GN+ VTE LL +F+ GP++ CK+IR+ Y F+ + A+ A+
Sbjct: 55 PTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKD-KSSYGFVHYFDRRCASMAI 113
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
+N R + MKVNWA + G ++DTS+H++IFVGDLSPE+ L ++F+ F S
Sbjct: 114 MTLNGRHIFGQPMKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCS 171
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R++ D +T +S+G+ FVSF + +A+ AI MNG+WL SR IR NW+T+ A E
Sbjct: 172 DARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKG--ATFGED 229
Query: 184 KRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF- 230
K + + E+ N+ +P N TVY G ++ + + ++F
Sbjct: 230 KHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQYTTVYVGNLSPEVTQLDLHRLFYTLG 289
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T + A AI+ + N + +KC WG +
Sbjct: 290 AGAIEEVRVQRDKGFGFVRYNTHDEAALAIQ-MGNAQPYLFSRQIKCSWGNK 340
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQI--GPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
Q TT+YVGNL VT+ L LF + G ++ +V R+ G + F+ + H AA A+
Sbjct: 263 QYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKG---FGFVRYNTHDEAALAI 319
Query: 64 AAMNKRVFL-EKEMKVNWASSP 84
N + +L +++K +W + P
Sbjct: 320 QMGNAQPYLFSRQIKCSWGNKP 341
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 28/296 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +F G V+ CK++R+ Y F+ + AA A
Sbjct: 49 DPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKE-KSSYGFIHYFDRRSAAMA 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS H++IFVGDLSPE+ TL F+ F
Sbjct: 108 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSGHFNIFVGDLSPEVTDSTLFACFSVFSSC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI + G+WLGSR IR NW+T+ A +N+
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG--AGSND 223
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
K Q+S K+I E+ N SS P TVY G + + + + F
Sbjct: 224 DK-QSSDVKSIA--ELTNGSSEDGKETVSSDAPENNPQYTTVYVGNLAPEATQVDLHRHF 280
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++R+ ++KG+ FV+++T A AI+ + NT + G +KC WG +
Sbjct: 281 HSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQ-MGNTQSFLCGKQIKCSWGSK 335
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E F G + +C++VR ++ Y F+ + +
Sbjct: 46 PGFDPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKS----SYGFIHYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 102 RSAAMAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSGH---------FN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS F + D RV + +G+ FV F ++ A AI
Sbjct: 141 -IFVGDLSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
Query: 262 IHNTDINGHTVKCFWG---------KESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQM 312
+ + ++C W K+S + ++A+ + ++ T N Q
Sbjct: 200 LTGKWLGSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQY 259
Query: 313 GYWYPQAAAYTATAAQLPQQFYQYG 337
Y A AT L + F+ G
Sbjct: 260 TTVYVGNLAPEATQVDLHRHFHSLG 284
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 168/294 (57%), Gaps = 24/294 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F+ GPV+ CK+IR+ Y F+ + A A
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKE-KSSYGFVHYFDRRSAGLA 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ L F+ +
Sbjct: 108 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A+ AI + G+WLGSR IR NW+T+ T+
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATK---GATSG 222
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
+Q+S +K++ + N +P N TVY G ++++ + + F
Sbjct: 223 EDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHS 282
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV+++T A AI+ + NT ++G +KC WG +
Sbjct: 283 LGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQ-MGNTHSYLSGRQMKCSWGSK 335
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + +C+++R ++ Y FV + +
Sbjct: 46 PGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKS----SYGFVHYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ +SH +N
Sbjct: 102 RSAGLAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSSH---------FN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + ++ FS + T D RV + +G+ FV F ++ A AI+
Sbjct: 141 -IFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPS 290
I + ++C W + + Q S
Sbjct: 200 ITGKWLGSRQIRCNWATKGATSGEDKQSS 228
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 160/323 (49%), Gaps = 53/323 (16%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---------------------- 47
LYVG LD VTE++L +F G V+ K+I +
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYLNL 163
Query: 48 ----------------YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQD 91
Y F+E+ A A+ +N R + E++VNWA K+D
Sbjct: 164 ITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKED 223
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
TS+H+HIFVGDLS E+ + L +AF+ G +S R++ D +T +S+GY FV+F ++A+AE
Sbjct: 224 TSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAE 283
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT---------------FD 196
A+++M+G+WLGSR+IR NW+ +K ++++ + T T +D
Sbjct: 284 KALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYD 343
Query: 197 EVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETAT 256
V Q+ T Y G + + +F FG +V+ R ++G+AFVK T E A
Sbjct: 344 MVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAA 403
Query: 257 HAIESIHNTDINGHTVKCFWGKE 279
AI ++ ++NG +KC WGK+
Sbjct: 404 MAICQLNGYNVNGRPLKCSWGKD 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 67/249 (26%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQT-------------------- 133
N ++VG L P + LK+ F G + + +I+ D
Sbjct: 100 NKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYV 159
Query: 134 -------------LKSKG--YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+SKG Y F+ + AE A+ +NG+ + IR NW+ + +
Sbjct: 160 YLNLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ---S 216
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
T ++ +SH ++ G ++N+E++ + FS G++ + RV
Sbjct: 217 NTASKEDTSSHFH-----------------IFVGDLSNEVNDEVLLQAFSACGSVSEARV 259
Query: 239 F------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE------SENNSTL 286
+ +GY FV F + A A+ S+ + ++C W + S+ +
Sbjct: 260 MWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 319
Query: 287 AQPSAPTTP 295
A PTTP
Sbjct: 320 AMGMTPTTP 328
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 183/368 (49%), Gaps = 57/368 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG LD VTE++L +F G V+ K+I +
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD--------------------------- 134
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ E++VNWA + K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R++
Sbjct: 135 ---KNEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMW 191
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D +T +S+GY FV+F ++++AE A+++M+G+WLGSR+IR NW+ +K ++++ +
Sbjct: 192 DMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAM 251
Query: 190 TKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
T T +D V Q+ T Y G + + +F FG +V
Sbjct: 252 GMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVV 311
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES------ENNSTLAQ 288
+ R ++G+AFVK T E A AI + ++NG +KC WGK+ E S Q
Sbjct: 312 ETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQFEGYSPQQQ 371
Query: 289 PSAPTTPQPNS-TAPQFPYIYNQQMGYWYPQAAAYTATAAQ-LPQQFYQYGQLGYPQGYV 346
TP NS T+P FP Y+ G PQ A + +++ QQ +G G P
Sbjct: 372 QQQAGTPTFNSNTSPYFPQ-YSGPSGPMTPQGGAVPSPSSRGWDQQSAPFGGPGMPG--- 427
Query: 347 GMVGRQVP 354
G+Q+P
Sbjct: 428 AAYGQQLP 435
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 160/325 (49%), Gaps = 55/325 (16%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---------------------- 47
LYVG LD VTE++L +F G V+ K+I +
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYVYL 163
Query: 48 ------------------YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPK 89
Y F+E+ A A+ +N R + E++VNWA K
Sbjct: 164 YLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASK 223
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
+DTS+H+HIFVGDLS E+ + L +AF+ G +S R++ D +T +S+GY FV+F ++A+
Sbjct: 224 EDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERAD 283
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT--------------- 194
AE A+++M+G+WLGSR+IR NW+ +K ++++ + T T
Sbjct: 284 AEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQS 343
Query: 195 FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKET 254
+D V Q+ T Y G + + +F FG +V+ R ++G+AFVK T E
Sbjct: 344 YDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHEN 403
Query: 255 ATHAIESIHNTDINGHTVKCFWGKE 279
A AI ++ ++NG +KC WGK+
Sbjct: 404 AAMAICQLNGYNVNGRPLKCSWGKD 428
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 162/292 (55%), Gaps = 17/292 (5%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D + ++YVGN+ VTE LL +F+ +GP++GCK+IR+ Y F+++ H A A
Sbjct: 16 DATSCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKD-KSSYGFVDYFDHRSAVAA 74
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L+ +N R + +KVNWA + G Q + T+ H+++FVGDLS E+ TL AF +
Sbjct: 75 LSTLNGRQMFGQSIKVNWAYASG-QREDTTAGHFNVFVGDLSAEVTDATLFAAFCIYPSC 133
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D ++ +S+G+ FVSF + EAE++I+ M G+WLG+R IR NW+ + + +
Sbjct: 134 SDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCNWAAKTNNTIQAD 193
Query: 183 RKRQNSHTKTITF-----DEVYNQSSPTN--------CTVYCGGFGKDLNEELVSKVFSP 229
+ + T+ E SS + TVY G + + + + + F
Sbjct: 194 ESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQITQAELHRQFHS 253
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G I D+RV KEKG+ FV++ T A AI++ + I G ++KC WG +
Sbjct: 254 LGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAANGRVIWGKSLKCSWGSK 305
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 47/270 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D ++ ++VG++ + L E FA G + C+++R ++ Y FV +
Sbjct: 13 PGFDATSCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKS----SYGFVDYFDH 68
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A++ +NG+ + +SI+ NW+ Q T F+
Sbjct: 69 RSAVAALSTLNGRQMFGQSIKVNWAYASG---------QREDTTAGHFN----------- 108
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
V+ G ++ + + F + + D RV + +G+ FV F +++ A +I
Sbjct: 109 -VFVGDLSAEVTDATLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISE 167
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQPSAPTT--------------PQPNSTAPQFPYI 307
+ + ++C W ++ NN+ A S TT + +S+A P I
Sbjct: 168 MTGKWLGTRPIRCNWAAKT-NNTIQADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEI 226
Query: 308 YNQQMGYWYPQAAAYTATAAQLPQQFYQYG 337
N Q Y + T A+L +QF+ G
Sbjct: 227 -NSQYTTVYVGNLSQQITQAELHRQFHSLG 255
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 7 PTT---LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
PTT +Y GN+ VTE LL +F+ GP++ CK+IR+ Y F+ + A+ A+
Sbjct: 59 PTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKD-KSSYGFVHYFDRRCASMAI 117
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
+N R + MKVNWA + G ++DTS+H++IFVGDLSPE+ L ++F+ F S
Sbjct: 118 MTLNGRHIFGQPMKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCS 175
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ R++ D +T +S+G+ FVSF + +A+ AI MNG+W+ SR IR NW+T+ A E
Sbjct: 176 DARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKG--ATFGED 233
Query: 184 KRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF- 230
K + + E+ N+ +P N TVY G ++ + + ++F
Sbjct: 234 KHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLG 293
Query: 231 -GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T + A AI+ + N + ++C WG +
Sbjct: 294 AGVIEEVRVQRDKGFGFVRYNTHDEAALAIQ-MGNAQPFLFSRQIRCSWGNK 344
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
Q TT+YVGNL VT+ L LF +G ++ +V R+ G + F+ + H AA A+
Sbjct: 267 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKG---FGFVRYNTHDEAALAI 323
Query: 64 AAMNKRVFL-EKEMKVNWASSP 84
N + FL ++++ +W + P
Sbjct: 324 QMGNAQPFLFSRQIRCSWGNKP 345
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 151/278 (54%), Gaps = 19/278 (6%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PG--NDP--YAFLEFVHH 56
++ T LYVGNLD VT+ ++ + P KV+ PG N+P Y F++F +
Sbjct: 8 DANATVLYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDN 67
Query: 57 TVAATALAAMNKRVFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A ++ +N R F K++KVNWA+ SP PK I+ G+L I+ + LK A
Sbjct: 68 ISAMQSMNFLNGREFCGKKVKVNWATNSPNGMPKV-IGTSVSIYCGNLDDTIDEEDLKAA 126
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F FGEI N ++VRDP T SK AF+SF K +AE AI M+G L +R+I+TNW+TR
Sbjct: 127 FEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIREMHGAMLKTRAIKTNWATR- 185
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
QN + +DEVY +S N TVY GG + EE + F +G IVD
Sbjct: 186 ---------NQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEEQIRSHFDDYGKIVD 236
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+R+F K YAF+KF T A AI + T++ G +K
Sbjct: 237 VRIFAAKNYAFIKFDTHANAATAICKSNGTELVGSCLK 274
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 161/281 (57%), Gaps = 13/281 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYYDRRYAALA 172
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + P++DTS H++IFVGDL PE+ TL F+ +
Sbjct: 173 ILSLNGRQLYGQPIKVNWAYT--STPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 230
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+T+ A +
Sbjct: 231 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEK 290
Query: 183 R----KRQNSHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GT 232
+ K S+ + + E N P N TVY G + V F G+
Sbjct: 291 QILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGS 350
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
I ++RV ++KG+ FV+++T E A AI+ + I G +K
Sbjct: 351 IEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 111 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYYDR 166
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ P R+ + H +N
Sbjct: 167 RYAALAILSLNGRQLYGQPIKVNWAYTSTP-----REDTSGH---------FN------- 205
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 206 -IFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 264
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 265 LNGKWLGNRQIRCNWATKGAN 285
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
D S ++VG+L VT+ L A FS +V+ + + + F+ F + A
Sbjct: 199 DTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDA 258
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGN--------QPKQDTSNHYH-------------- 97
+A+ +N + ++++ NWA+ N K D SN
Sbjct: 259 QSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPEN 318
Query: 98 ------IFVGDLSPEIETQTLKEAFAPFG--EISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
++VG+L E + F G I R+ RD KG+ FV + E
Sbjct: 319 NPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD------KGFGFVRYSTHEE 372
Query: 150 AENAITAMNGQWLGSRSIRTN 170
A AI NGQ +G R I+++
Sbjct: 373 AALAIQMGNGQLIGGRQIKSS 393
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 164/327 (50%), Gaps = 21/327 (6%)
Query: 28 FSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQ 87
FS +G + I + Y F+E+ A A+ +N R + E++VNWA
Sbjct: 118 FSCLGTRRAADTIFQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTT 177
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
K+DTSNH+HIFVGDLS E+ + L +AFA FG +S R++ D +T +S+GY FV+F +
Sbjct: 178 SKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 237
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNERKRQNSHTKTIT------------ 194
+AE A+++M+G+WLGSR+IR NW+ +K P++ ++ Q T
Sbjct: 238 PDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGM 297
Query: 195 --FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
++ + Q+ TVY G V +F FG +V+ R ++G+AF+K +
Sbjct: 298 ASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESH 357
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESENNSTLA-----QPSAPTTPQPNSTAPQFPYI 307
E A AI ++ ++NG +KC WGK+ N+ Q +P + P P
Sbjct: 358 EAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTA 417
Query: 308 YNQQMGYWYP-QAAAYTATAAQLPQQF 333
Y Q G Y Q Y AAQ P +
Sbjct: 418 YFPQYGAQYSGQPGNYGGPAAQSPAGY 444
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 161/286 (56%), Gaps = 21/286 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS GP++GCK+IR+ Y F+++ AA +
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKE-KSSYGFVDYFDRRSAALS 107
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + + ++DTS HY+IFVGDLSPE+ TL F+ +
Sbjct: 108 IVTLNGRHLFGQPIKVNWAYA--SSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSC 165
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI +NG+WLGSR IR NW+T+ A NE
Sbjct: 166 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIRCNWATKG--AGGNE 223
Query: 183 RKRQNSHTKTIT---------FDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSP 229
K NS K++ + N +P N TVY G ++ + + F
Sbjct: 224 DK-PNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHA 282
Query: 230 F--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
G I D+RV ++KG+ FV+++T A AI+ + + G +K
Sbjct: 283 LGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIK 328
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 38/209 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 46 PGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS----SYGFVDYFDR 101
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A +I +NG+ L + I+ NW+ +++R+ + H YN
Sbjct: 102 RSAALSIVTLNGRHLFGQPIKVNWAY-----ASSQREDTSGH---------YN------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 141 -IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 199
Query: 262 IHNTDINGHTVKCFW------GKESENNS 284
++ + ++C W G E + NS
Sbjct: 200 LNGRWLGSRQIRCNWATKGAGGNEDKPNS 228
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 162/281 (57%), Gaps = 13/281 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYYDRRYAALA 172
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + P++DTS H++IFVGDL PE+ TL F+ +
Sbjct: 173 ILSLNGRQLYGQPIKVNWAYT--STPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 230
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+T+ A +
Sbjct: 231 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEK 290
Query: 183 R----KRQNSHTKTITFDEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GT 232
+ K S+ + + E N+ P N TVY G + V F G+
Sbjct: 291 QILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGS 350
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
I ++RV ++KG+ FV+++T E A AI+ + I G +K
Sbjct: 351 IEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 111 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYYDR 166
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ P R+ + H +N
Sbjct: 167 RYAALAILSLNGRQLYGQPIKVNWAYTSTP-----REDTSGH---------FN------- 205
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 206 -IFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 264
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 265 LNGKWLGNRQIRCNWATKGAN 285
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
D S ++VG+L VT+ L A FS +V+ + + + F+ F + A
Sbjct: 199 DTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDA 258
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGN--------QPKQDTSNHYH-------------- 97
+A+ +N + ++++ NWA+ N K D SN
Sbjct: 259 QSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPEN 318
Query: 98 ------IFVGDLSPEIETQTLKEAFAPFG--EISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
++VG+L E + F G I R+ RD KG+ FV + E
Sbjct: 319 NPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRD------KGFGFVRYSTHEE 372
Query: 150 AENAITAMNGQWLGSRSIRTN 170
A AI NGQ +G R I+++
Sbjct: 373 AALAIQMGNGQLIGGRQIKSS 393
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 19/306 (6%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI 107
Y F+E+ A A+ +N R + E++VNWA + K+DTSNH+HIFVGDLS E+
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEV 130
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L +AF+ FG +S R++ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+I
Sbjct: 131 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAI 190
Query: 168 RTNWSTRK------------PPAMTNERKRQNSHTKT---ITFDEVYNQSSPTNCTVYCG 212
R NW+ +K MT + H T ++D + NQ+ T Y G
Sbjct: 191 RCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVG 250
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + +F FG +V+ R ++G++FVK T E A AI ++ ++NG +
Sbjct: 251 NLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKMDTHENAAMAICQLNGYNVNGRPL 310
Query: 273 KCFWGKE-SENNSTLAQPSAPTTPQPNSTA--PQFPYIYNQQMGYW-YPQAAAYTATAAQ 328
KC WGK+ + ++ P+ +PQ T P P Y Q G YP+ AA +
Sbjct: 311 KCSWGKDKTPSHPQQFDPNQQYSPQSAQTPGYPTTPSTYFNQYGSGTYPREAAAPNSVVN 370
Query: 329 LPQQFY 334
P Y
Sbjct: 371 APPMGY 376
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 135 KSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT 194
K Y FV + AE A+ +NG+ + IR NW+ + NS K T
Sbjct: 67 KGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQS-----------NSTNKEDT 115
Query: 195 FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVK 248
+ + ++ G ++N+E++ + FS FG++ + RV + +GY FV
Sbjct: 116 SNHFH---------IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVA 166
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFWGKE 279
F + A A+ S+ + ++C W +
Sbjct: 167 FRERPDAEKALSSMDGEWLGSRAIRCNWANQ 197
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 150/266 (56%), Gaps = 17/266 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
LY+G LD VTE++L +F G V+ K+I + + Y F+E+ A A++ +N
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMSTLN 153
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
R + E++VNWA N K+DTSNH+HIFVGDLS E+ + L +AF+ FG +S R+
Sbjct: 154 GRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARV 213
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-PPAMTNERKRQ 186
+ D +T +S+GY FV+F ++ +AE A+++M+G+WLGSR+IR NW+ +K P+++ ++
Sbjct: 214 MWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMA 273
Query: 187 -----------NSHTKTI---TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ H T ++D V Q+ T Y G + + +F FG
Sbjct: 274 AMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGY 333
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHA 258
+V+ R ++G+ FVK T E H
Sbjct: 334 VVETRFQTDRGFRFVKMDTHEKCCHG 359
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N +++G L + L++ F G + + +I+ D + K Y FV + AE A
Sbjct: 90 NKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERA 148
Query: 154 ITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGG 213
++ +NG+ + IR NW+ + N++ K T + + ++ G
Sbjct: 149 MSTLNGRRVHQSEIRVNWAYQS-----------NNNNKEDTSNHFH---------IFVGD 188
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDI 267
++N+E++ + FS FG++ + RV + +GY FV F + A A+ S+ +
Sbjct: 189 LSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWL 248
Query: 268 NGHTVKCFWGKE------SENNSTLAQPSAPTTP 295
++C W + S+ + A P+TP
Sbjct: 249 GSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTP 282
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 41/323 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP--------YAFLEFVHHTVAA 60
LYVG LD VTE++L +F G V+ K+I + + P Y F+E+ A
Sbjct: 85 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 144
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
+A +N R E DTSNH+HIFVGDLS E+ + L +AF+ FG
Sbjct: 145 RGMATLNGRRIHNNE---------------DTSNHFHIFVGDLSNEVNDEVLLQAFSTFG 189
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+S R++ D +T +S+GY FV+F +A+A+ A+++M+G+WLGSR+IR NW+ +K
Sbjct: 190 PVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSI 249
Query: 181 NERKRQNSHTKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
++++ S T T +D V Q+ T Y G ++ +
Sbjct: 250 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVP 309
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
+F FG + + R ++G+AF+K T E A AI ++ ++NG +KC WGK+
Sbjct: 310 LFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQ 369
Query: 286 LAQPSAPTTPQPNSTAPQFPYIY 308
S PNS PQ P Y
Sbjct: 370 FEGYSPAGG--PNSAYPQTPSAY 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHH 56
D S ++VG+L V +E+L FS GPV +V+ R G Y F+ F
Sbjct: 160 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRG---YGFVAFRDR 216
Query: 57 TVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHI---- 98
A AL++M+ + ++ NWA+ G QP H+H
Sbjct: 217 ADADRALSSMDGEWLGSRAIRCNWANQKG-QPSISQQQAMASMGMTPTTPFGHHHFPTHG 275
Query: 99 ------------------FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+VG+L+P L F FG ++ R D +G+A
Sbjct: 276 VQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFA 329
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F+ A AI +NG + R ++ +W +PP
Sbjct: 330 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 366
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 160/283 (56%), Gaps = 17/283 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 62 DSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYYDRRYAALA 120
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDL PE+ TL F+ +
Sbjct: 121 ILSLNGRPLYGQPIKVNWAYT--STQREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 178
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+T+ A E
Sbjct: 179 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKG--ANAGE 236
Query: 183 RKRQNSHTKTITF----------DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF-- 230
K+ +T +E +S+P TVY G + V F
Sbjct: 237 EKQIVDSKVDLTNGTSESGKENPNEDGPESNPQFTTVYVGNLPHEATNNDVHLFFHSLGA 296
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
G+I ++RV ++KG+ FV+++T E A AI+ + I G +K
Sbjct: 297 GSIEEVRVTRDKGFGFVRYSTHEEAAQAIQMANGQLIGGRQIK 339
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++S ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 59 PGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYYDR 114
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 115 RYAALAILSLNGRPLYGQPIKVNWAY-----TSTQREDTSGH---------FN------- 153
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 154 -IFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 212
Query: 262 IHNTDINGHTVKCFWGKESEN 282
++ + ++C W + N
Sbjct: 213 LNGKWLGNRQIRCNWATKGAN 233
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 39/200 (19%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI---REPGNDPYAFLEFVHHTVA 59
D S ++VG+L VT+ L A FS +V+ + + + F+ F + A
Sbjct: 147 DTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDA 206
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGN--------QPKQDTSNHYH-------------- 97
+A+ +N + ++++ NWA+ N K D +N
Sbjct: 207 QSAINDLNGKWLGNRQIRCNWATKGANAGEEKQIVDSKVDLTNGTSESGKENPNEDGPES 266
Query: 98 ------IFVGDLSPEIETQTLKEAFAPFG--EISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
++VG+L E + F G I R+ RD KG+ FV + E
Sbjct: 267 NPQFTTVYVGNLPHEATNNDVHLFFHSLGAGSIEEVRVTRD------KGFGFVRYSTHEE 320
Query: 150 AENAITAMNGQWLGSRSIRT 169
A AI NGQ +G R I+T
Sbjct: 321 AAQAIQMANGQLIGGRQIKT 340
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 17/213 (7%)
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
S H+H+FVGDLS ++ + LK F FGE+S +++RD QT KSKGY FVSF K AEN
Sbjct: 2 SEHFHVFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAEN 61
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
AI+ MNG+W+G R++RTNW+ RK +E R +TF++V+N + N +VY G
Sbjct: 62 AISGMNGKWIGKRAVRTNWAARK----NSEENRDK-----LTFEQVFNSTKADNTSVYVG 112
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + FS +G I ++RVFK + YAFV++ KE AT AI ++ ++ G+ V
Sbjct: 113 NISPQTTDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQV 172
Query: 273 KCFWGK-----ESENNSTL---AQPSAPTTPQP 297
+C WG+ E EN+ + QP+ P P
Sbjct: 173 RCSWGRTQAVIEIENHIIVFSDLQPNQALNPLP 205
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAM 66
++VG+L V+ ELL + F + G V KVIR+ + Y F+ F + A A++ M
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQD-----------TSNHYHIFVGDLSPEIETQTLKEA 115
N + ++ ++ NWA+ ++ +D +++ ++VG++SP+ L+++
Sbjct: 67 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLRDS 126
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
F+ +G+I+ R+ K++ YAFV + KK A AI MNG+ L +R +W
Sbjct: 127 FSTYGDIAEVRV------FKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRCSW 176
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T++YVGN+ T+ L FS G + +V + YAF+ + A A+ MN
Sbjct: 107 TSVYVGNISPQTTDVDLRDSFSTYGDIAEVRVFK---TQRYAFVRYEKKECATKAIMEMN 163
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSP 105
+ +++ +W + Q + NH +F DL P
Sbjct: 164 GKELAGNQVRCSWGRT---QAVIEIENHIIVF-SDLQP 197
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 31/217 (14%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC---------------------R 126
PK DTS +YH+FVGDLS E+ TLK AF FGEIS+ +
Sbjct: 77 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAK 136
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
++RDPQTLKSKGY FVSF K A+ AI MNGQ +G R IRTNW+ RK
Sbjct: 137 VIRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRK----------F 186
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
+ + +T+D ++N + N +VY GG +E + + FS T++++R+FK++GYAF
Sbjct: 187 DGGEENVTYDNIFNATHAANTSVYVGGISPITTDEELMQSFSAIATVIEVRLFKQQGYAF 246
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
V++ K+ A AI S++ ING ++C W + + +N
Sbjct: 247 VRYLNKDAAARAIMSMNGKVINGQKIRCSWSRTTMDN 283
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 40/204 (19%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGC---------------------KVIR 41
D S+ ++VG+L V L A F G + KVIR
Sbjct: 80 DTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAKVIR 139
Query: 42 EP---GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS----- 93
+P + Y F+ F A A+ MN ++ ++++ NWA + +++ +
Sbjct: 140 DPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRKFDGGEENVTYDNIF 199
Query: 94 NHYH-----IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 148
N H ++VG +SP + L ++F+ + R+ K +GYAFV ++ K
Sbjct: 200 NATHAANTSVYVGGISPITTDEELMQSFSAIATVIEVRL------FKQQGYAFVRYLNKD 253
Query: 149 EAENAITAMNGQWLGSRSIRTNWS 172
A AI +MNG+ + + IR +WS
Sbjct: 254 AAARAIMSMNGKVINGQKIRCSWS 277
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 174/347 (50%), Gaps = 49/347 (14%)
Query: 8 TTLYVGNLDVSVTEELLCA-----------LFSQIGPVKGCKVIREPGNDP--YAFLEFV 54
T+ V DV+ LCA +F G V+ K+I + + Y F+E+
Sbjct: 73 TSPNVRQYDVTYFRRWLCASCGSGTKQARPIFETTGHVQSVKIIPDKNSKGLNYGFVEYD 132
Query: 55 HHTVAATALAAMNKRVF--------------LEKEMKVNWASSPGNQPKQDTSNHYHIFV 100
A A+A +N R L++E++VNWA + K+DTSNH+HIFV
Sbjct: 133 DPGAAERAMATLNGRRVHQSNYDIRSLKPHPLQQEIRVNWAYQSNSNNKEDTSNHFHIFV 192
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
GDLS E+ + L +AF+ FG +S R++ D +T +S+GY FV+F ++++AE A+++M+G+
Sbjct: 193 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGE 252
Query: 161 WLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT---------------FDEVYNQSSPT 205
WLGSR+IR NW+ +K ++++ + T T +D V Q+
Sbjct: 253 WLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQW 312
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNT 265
T Y G + + +F FG +V+ R ++G+AFVK T E A AI +
Sbjct: 313 QTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGY 372
Query: 266 DINGHTVKCFWGKES------ENNSTLAQPSAPTTPQPNS-TAPQFP 305
++NG +KC WGK+ E S Q TP NS T+P FP
Sbjct: 373 NVNGRPLKCSWGKDRPPTGQFEGYSPQQQQQQAGTPTFNSNTSPYFP 419
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 174/368 (47%), Gaps = 63/368 (17%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
E LYVG L+ VTE++L +F G V+ K+I +
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPD--------------------- 118
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
+ E++VNWA K+DTS+H+HIFVGDLS E+ L +AF+ FG +S
Sbjct: 119 ---------KNEIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVS 169
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP-PAMTNE 182
R++ D +T +++GY FV+F +++AE A+++M+G+WLGSR+IR NW+ +K P++ +
Sbjct: 170 EARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQ 229
Query: 183 RKRQNSHTKTIT--------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
+ Q T +D V NQ+ T Y G V +F
Sbjct: 230 QAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPLFQ 289
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS---- 284
FG +V+ R ++G+AF+K T E A AI ++ ++NG +KC WGK+ N+
Sbjct: 290 NFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQGNF 349
Query: 285 --TLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQ-AAAYTATAAQL--PQQFYQYGQL 339
QP +P + Q P FP +YPQ A Y PQ G
Sbjct: 350 DPAHQQPYSPQSAQ----TPGFPGTPT-----YYPQYGAQYGGQPGNFAGPQGGSPAGYG 400
Query: 340 GYPQGYVG 347
G P GY G
Sbjct: 401 GSPMGYGG 408
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 45/285 (15%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG LD VTE++L +F G V+ K+I +
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD--------------------------- 136
Query: 70 VFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+ E++VNWA K+DTS+H+HIFVGDLS E+ + L +AF+ G +S R++
Sbjct: 137 ---KNEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMW 193
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+IR NW+ +K ++++ +
Sbjct: 194 DMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAM 253
Query: 190 TKTIT---------------FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
T T +D V Q+ T Y G + + +F FG +V
Sbjct: 254 GMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVV 313
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 314 ETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 358
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 162/296 (54%), Gaps = 29/296 (9%)
Query: 7 PTT---LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
PTT +Y GN+ VTE LL +F+ GP++ CK+IR+ Y F+ + A+ A+
Sbjct: 59 PTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKD-KSSYGFVHYFDRRCASMAI 117
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
+N R + MKVNWA + G ++DTS+H++IFVGDLSPE+ L ++F+ F S
Sbjct: 118 MTLNGRHIFGQPMKVNWAYATGQ--REDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCS 175
Query: 124 ----NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
+ R++ D +T +S+G+ FVSF + +A+ AI MNG+W+ SR IR NW+T+ A
Sbjct: 176 SYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKG--AT 233
Query: 180 TNERKRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDLNEELVSKVF 227
E K + + E+ N+ +P N TVY G ++ + + ++F
Sbjct: 234 FGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLF 293
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTD--INGHTVKCFWGKE 279
G I ++RV ++KG+ FV++ T + A AI+ + N + ++C WG +
Sbjct: 294 YTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQ-MGNAQPFLFSRQIRCSWGNK 348
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
Q TT+YVGNL VT+ L LF +G ++ +V R+ G + F+ + H AA A+
Sbjct: 271 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKG---FGFVRYNTHDEAALAI 327
Query: 64 AAMNKRVFL-EKEMKVNWASSP 84
N + FL ++++ +W + P
Sbjct: 328 QMGNAQPFLFSRQIRCSWGNKP 349
>gi|345489892|ref|XP_001600085.2| PREDICTED: nucleolysin TIA-1-like [Nasonia vitripennis]
Length = 209
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 96/131 (73%)
Query: 189 HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVK 248
+ K +VYNQSSPTNCTVYCGGF + E+L++K FSPFGTI DIRVFK+KGYAF+K
Sbjct: 4 YIKIPYLKQVYNQSSPTNCTVYCGGFTNGITEDLITKTFSPFGTIQDIRVFKDKGYAFIK 63
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIY 308
FTTKE ATHAIE HNT+ING VKCFWGKE+ + +++ + Q S A Q+ Y Y
Sbjct: 64 FTTKEAATHAIERTHNTEINGSVVKCFWGKENGDPNSVGPNANQQAQQATSGAGQYAYGY 123
Query: 309 NQQMGYWYPQA 319
QQM YWYPQ+
Sbjct: 124 GQQMSYWYPQS 134
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
Q + + ++ G + I + + F+PFG I + R+ +D KGYAF+ F K
Sbjct: 16 QSSPTNCTVYCGGFTNGITEDLITKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEA 69
Query: 150 AENAITAMNGQWLGSRSIRTNWS 172
A +AI + + ++ W
Sbjct: 70 ATHAIERTHNTEINGSVVKCFWG 92
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G +TE+L+ FS G ++ +V ++ G YAF++F A
Sbjct: 15 NQSSPTNCTVYCGGFTNGITEDLITKTFSPFGTIQDIRVFKDKG---YAFIKFTTKEAAT 71
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ + +K W G+
Sbjct: 72 HAIERTHNTEINGSVVKCFWGKENGD 97
>gi|194220644|ref|XP_001917255.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Equus caballus]
Length = 300
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 136/229 (59%), Gaps = 35/229 (15%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M DE+ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H A
Sbjct: 1 MEDET-PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHA 59
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS-----------NHYHIFVGDLSPEIE 108
A ALAAMN R + KE+KVNWA++P +Q K+DTS +H+H+FVGDLSPEI
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT 118
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK----------------AEAEN 152
T+ +K AFAPFG IS+ R+V+D T KSKGY FVSF K A +
Sbjct: 119 TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGYSFVRFNSHESAAH 178
Query: 153 AITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
AI ++NG + ++ W ++ M N ++QN I + + Y Q
Sbjct: 179 AIVSVNGTTIEGHVVKCYWG-KETLDMINPVQQQNQ----IGYPQAYGQ 222
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 48/273 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T T +++++ + T+ V Q S + V+ G +
Sbjct: 67 NGRKIMGKEVKVNWAT------TPSSQKKDTSSSTV----VSTQRSQDHFHVFVGDLSPE 116
Query: 218 LNEELVSKVFSPFGTIVDIRV----------------------FKEKGYAFVKFTTKETA 255
+ E + F+PFG I D RV F +KGY+FV+F + E+A
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGYSFVRFNSHESA 176
Query: 256 THAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYW 315
HAI S++ T I GH VKC+WGKE+ + Q Q N +P Y Q G W
Sbjct: 177 AHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQ-------QQNQIG--YPQAYG-QWGQW 226
Query: 316 Y---PQAAAYTATAAQLPQQFYQYGQLGYPQGY 345
Y Q Y Q+P + YGQ QG+
Sbjct: 227 YGNAQQIGQYMPNGWQVP-AYGMYGQAWNQQGF 258
>gi|350582294|ref|XP_003481239.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Sus scrofa]
Length = 220
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 117/192 (60%), Gaps = 17/192 (8%)
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
M GQWLG R IRTNW+TRKPPA + S+TK +++DEV NQSSP+NCTVYCGG
Sbjct: 1 MGGQWLGGRQIRTNWATRKPPA---PKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS 57
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
L E+L+ + FSPFG I++IRVF +KGY+FV+F + E+A HAI S++ T I GH VKC+W
Sbjct: 58 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 117
Query: 277 GKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY---PQAAAYTATAAQLPQQF 333
GKE+ + Q Q N +P Y Q G WY Q Y Q+P +
Sbjct: 118 GKETLDMINPVQ-------QQNQIG--YPQAYG-QWGQWYGNAQQIGQYMPNGWQVP-AY 166
Query: 334 YQYGQLGYPQGY 345
YGQ QG+
Sbjct: 167 GMYGQAWNQQGF 178
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 28/153 (18%)
Query: 66 MNKRVFLEKEMKVNWASSPGNQPK-----------------QDTSNHYHIFVGDLSPEIE 108
M + ++++ NWA+ PK Q + ++ ++ G ++ +
Sbjct: 1 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 60
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
Q +++ F+PFG+I R+ D KGY+FV F A +AI ++NG + ++
Sbjct: 61 EQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 114
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
W ++ M N ++QN I + + Y Q
Sbjct: 115 CYWG-KETLDMINPVQQQNQ----IGYPQAYGQ 142
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 MCDESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTV 58
+ ++S P+ T+Y G + +TE+L+ FS G + +V + G Y+F+ F H
Sbjct: 39 VVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG---YSFVRFNSHES 95
Query: 59 AATALAAMNKRVFLEKEMKVNWA 81
AA A+ ++N +K W
Sbjct: 96 AAHAIVSVNGTTIEGHVVKCYWG 118
>gi|170035082|ref|XP_001845400.1| ribonucleoprotein [Culex quinquefasciatus]
gi|167876952|gb|EDS40335.1| ribonucleoprotein [Culex quinquefasciatus]
Length = 283
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/226 (50%), Positives = 140/226 (61%), Gaps = 33/226 (14%)
Query: 189 HTKTITFDEVYNQSSPTNCTVYCGGFGKD----LNEELVSKVFSPFGTIVDIRVFKEKGY 244
+ K +TFDEVYNQSSPTNCTVYCGG G L+EE++ K FSPFGTI +IRVFK+KGY
Sbjct: 8 NAKPLTFDEVYNQSSPTNCTVYCGGVGGTLAGGLSEEILQKTFSPFGTIQEIRVFKDKGY 67
Query: 245 AFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQF 304
AFV+F+TKE ATHAI ++HN++IN TVKC WGKES + + +AP+ + F
Sbjct: 68 AFVRFSTKEAATHAIVAVHNSEINAQTVKCSWGKESGDPN-----NAPSLASQALSQAGF 122
Query: 305 PY--IYNQQM-GYW----YPQAAAYTATAAQLPQQF------YQYGQL-GYPQGYVGMVG 350
P+ Y QQ+ GYW AA L QF Y YGQ GY QGY+GM G
Sbjct: 123 PFNTAYGQQVAGYWYPPAPTYPTTPAPAAAPLQGQFLQGMQGYTYGQFAGYQQGYMGM-G 181
Query: 351 RQVPG-WQGIPG-AQ--PTAQQMAVAQA-----QPSMMAAYAMQQF 387
Q+PG W G+P AQ TAQQ+A A Q + + AY MQQF
Sbjct: 182 MQLPGAWPGVPTQAQIPATAQQLAQAGVGGALPQAAGVVAYPMQQF 227
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
LS EI L++ F+PFG I R+ +D KGYAFV F K A +AI A++ +
Sbjct: 41 LSEEI----LQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHNSEI 90
Query: 163 GSRSIRTNW 171
+++++ +W
Sbjct: 91 NAQTVKCSW 99
>gi|307181926|gb|EFN69366.1| Nucleolysin TIA-1 isoform p40 [Camponotus floridanus]
Length = 323
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 123/214 (57%), Gaps = 46/214 (21%)
Query: 188 SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFV 247
S+ K +TFDEVYNQSSPTNCTVYCGG L EEL+ K FSPFG+I +IRVFK+KGYAF+
Sbjct: 20 SNAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFI 79
Query: 248 KFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYI 307
+F+TKE+ATHAI ++HNTDING TVKC WGKES + + Q T Q S+A +PY
Sbjct: 80 RFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQ-----TGQALSSA-TYPYY 133
Query: 308 -----------------------YNQQMGYWYPQAAAYTATAAQL-------PQQFYQYG 337
Q+GYWYP +Y TA Q+ Q Y YG
Sbjct: 134 AAAAAAAAAAAGVAGVGGVGGVGNAGQLGYWYP-PQSYPTTATQMQAGGFLQGMQGYTYG 192
Query: 338 QL-GYPQG-YVGM------VGRQVPGW-QGIPGA 362
Q GY Q Y+GM GW QG+PG
Sbjct: 193 QFAGYQQAQYMGMGMGAVHAAGTAAGWGQGLPGG 226
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++ G L+ + + +++ F+PFG I R+ +D KGYAF+ F K A +AI A+
Sbjct: 41 VYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 94
Query: 158 NGQWLGSRSIRTNW 171
+ + ++++ +W
Sbjct: 95 HNTDINGQTVKCSW 108
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 3 DESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S PT T+Y G L +TEEL+ FS G ++ +V ++ G YAF+ F A
Sbjct: 32 NQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKG---YAFIRFSTKESAT 88
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN 86
A+ A++ + +K +W G+
Sbjct: 89 HAIVAVHNTDINGQTVKCSWGKESGD 114
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 142/272 (52%), Gaps = 17/272 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDP-YAFLEFVHHTVAATALAAM 66
LYVGNL V E +L +FS +G V +++ R GN AF++F H AA AL +
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N R+ KE+++ WA + ++T++H HIFVG+LS ++ L +AF GE S+ R
Sbjct: 67 NGRILYNKEVRIQWAFQK--EKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDAR 124
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
++ D T +SKG+ FVSF K AE A+ M+G +G IR W+ K A+T
Sbjct: 125 VMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTG----- 179
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
+ D V +++ P N VY G ++ EE + F +G I ++ + GY F
Sbjct: 180 ------LDIDTV-DRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGYGF 232
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
V + A AI ++ ++ G VKC WG+
Sbjct: 233 VTYRDHSAAVQAIVGMNGKELKGKMVKCSWGR 264
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
D + P T +YVGNL V EE L A F G + G K + G Y F+ + H+ A
Sbjct: 186 DRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGG---YGFVTYRDHSAAV 242
Query: 61 TALAAMNKRVFLEKEMKVNWA 81
A+ MN + K +K +W
Sbjct: 243 QAIVGMNGKELKGKMVKCSWG 263
>gi|448111784|ref|XP_004201926.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359464915|emb|CCE88620.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 156/329 (47%), Gaps = 60/329 (18%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
T LYVG L SV+E++L LFS G VK K + + N P YAF+EF + A AL
Sbjct: 72 TILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDK-NRPGFSYAFVEFENTDSAELALR 130
Query: 65 AMNKRVFLEKEMKVNWA---SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+N R+ +K+NWA S+ +Q+ ++IFVGDLSPE++ ++L +AF+ F
Sbjct: 131 TLNGRMVNNSVIKINWAYQSSAVSTASQQEP--FFNIFVGDLSPEVDDESLHKAFSKFES 188
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP----- 176
+ ++ D QT +S+GY FVSF + +AE A+ MNG+W+G R+IR NW++ K
Sbjct: 189 LRQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHKQFNNPK 248
Query: 177 --------PAMTNERKRQ--------------------------------NSHTKTI--- 193
P N + R N + I
Sbjct: 249 FRAGNNRYPNHGNRQYRSFHANPMQPQLHNQPIMPGLQSQASTAYQPGAGNGNQSNIPIM 308
Query: 194 ---TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFT 250
+FD V Q+ TVY G + + + FG IVD + EKG AFV +
Sbjct: 309 SPQSFDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFKFHPEKGCAFVNYD 368
Query: 251 TKETATHAIESIHNTDINGHTVKCFWGKE 279
+ E A AI + ING +KC WGKE
Sbjct: 369 SHERAALAIVQLAGFTINGRPLKCGWGKE 397
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L + L++ F+ G + + + + D + YAFV F AE A+ +
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLND-KNRPGFSYAFVEFENTDSAELALRTL 132
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + I+ NW+ Q+S T + E + ++ G +
Sbjct: 133 NGRMVNNSVIKINWAY------------QSSAVSTASQQEPF-------FNIFVGDLSPE 173
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + K FS F ++ D++ + +GY FV F + A A+++++ I G
Sbjct: 174 VDDESLHKAFSKFESLRQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRA 233
Query: 272 VKCFWGKESENNSTLAQPSAPTTPQPNSTAPQF---------PYIYNQQM--GYWYPQAA 320
++C W + N+ + A PN Q+ P ++NQ + G +
Sbjct: 234 IRCNWASHKQFNNPKFR--AGNNRYPNHGNRQYRSFHANPMQPQLHNQPIMPGLQSQAST 291
Query: 321 AYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQ 357
AY A Q + PQ + +V RQ P WQ
Sbjct: 292 AYQPGAGNGNQSNI---PIMSPQSF-DIVLRQTPSWQ 324
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
+N +Y GG K ++E+++ +FS G + I+ +K YAFV+F ++A A+
Sbjct: 70 SNTILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKNRPGFSYAFVEFENTDSAELAL 129
Query: 260 ESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ +N +K W +S ST +Q
Sbjct: 130 RTLNGRMVNNSVIKINWAYQSSAVSTASQ 158
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 144/281 (51%), Gaps = 40/281 (14%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
++ T LYVGNLD VT+ ++ + P K++ + +
Sbjct: 8 DTSATILYVGNLDKRVTDVMMLNILRAGLPHVKDKIL----------------SAKMFST 51
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
A +N V+ E K AS IFVGDL ++ L++AF PFGEI
Sbjct: 52 ADINTCVYNSMENKKIKAS-------------ITIFVGDLDDDLTDSELRQAFEPFGEIL 98
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
N ++VRD T KSK Y F+SF K +AE AI M+G L R I+TNW+TR
Sbjct: 99 NAKVVRDAATEKSKNYGFISFTNKPDAERAIRDMHGAMLKRRPIKTNWATRN-------- 150
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI-RVFKEK 242
QNS + +D+V+ + S +NCTVY +++E++ K F G IV RVF K
Sbjct: 151 --QNSKPSQLDYDQVFKEVSESNCTVYVTNLPDRISDEVLVKHFEDCGKIVGTPRVFDGK 208
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
+AF++F + AT AI + +++NG +KC+WGK+SE++
Sbjct: 209 NFAFIRFESHAAATTAIVKGNGSELNGAILKCWWGKDSESH 249
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 20/294 (6%)
Query: 6 QPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGND-PYAFLEFVHHTVAA 60
QP+ +LYVGNLD V ELL +F IGPVK KV+ R G + F++F A
Sbjct: 9 QPSGMSLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAI 68
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQP-----KQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ M+ R +E++++WA + +D +N + IFVG+L P+++ + L +A
Sbjct: 69 RAMELMHGRRVYGQEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKA 128
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F+ F ++ +I +D +T GY FVSF +K +A+ A+ M G L R++R +W+ K
Sbjct: 129 FSSFSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGK 188
Query: 176 PPA---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
A T ++ T + Q+ P N +VY G D++ + + F FG
Sbjct: 189 NAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFRGFGD 248
Query: 233 IVDIRV-------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
I D+++ +++ YAFVKF + E A AI +H +I G V+C WG+E
Sbjct: 249 IEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHDMHGKEIAGCVVQCEWGRE 302
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 132/232 (56%), Gaps = 5/232 (2%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI 107
Y F+E+ A A+ +N R + E++VNWA N K+DTSNH+HIFVGDLS E+
Sbjct: 41 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEV 100
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L +AF+ FG +S R++ D +T +S+GY FV+F ++A+AE A+++M+G+WLGSR+I
Sbjct: 101 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAI 160
Query: 168 RTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF 227
R NW+ +K ++++ + T T ++ Y + ++
Sbjct: 161 RCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY-----DMVVQQTPQWQT 215
Query: 228 SPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ + R ++G+AFVK T E A AI ++ ++NG +KC WGK+
Sbjct: 216 TTLALSLKTRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 267
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEV 198
Y FV + AE A+ +NG+ + IR NW+ + N++ K T +
Sbjct: 41 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQS-----------NNNNKEDTSNHF 89
Query: 199 YNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTK 252
+ ++ G ++N+E++ + FS FG++ + RV + +GY FV F +
Sbjct: 90 H---------IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRER 140
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKE------SENNSTLAQPSAPTTP 295
A A+ S+ + ++C W + S+ + A PTTP
Sbjct: 141 ADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTP 189
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 152/327 (46%), Gaps = 57/327 (17%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAAM 66
LYVG L S+ E+ L FS GPV K++ + YAF+EFV AA AL
Sbjct: 45 VLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNYAFVEFVDEAGAAAALQEF 104
Query: 67 NKRVFLEKEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
N F +K+N+A SS N + Y+IFVGDLSPE++ ++L + F+ F +
Sbjct: 105 NGSSFENSMLKINYAYQSSTFNATQNSDDPTYNIFVGDLSPEVDDESLHKFFSAFESLKQ 164
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS------TRKPPA 178
++ D QT +S+GY FV+F A+AE A++ MNG+ L R+IR NW+ +R P
Sbjct: 165 AHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWASHKQQNSRGAPR 224
Query: 179 MTNERK------------------RQNS--------------------------HTKTI- 193
N+R+ QN+ +T +
Sbjct: 225 QNNQRQFRPQYQRPGFNESPVPMPEQNNFGDAQFSLPQRPQQEQQMMPNLAMGPNTGVMS 284
Query: 194 --TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTT 251
+FD V Q+ TVY G + + + FG IVD + EKG AFVK+ T
Sbjct: 285 PHSFDIVLRQTPSWQTTVYLGNIAHFTQQNDLIPLLQNFGYIVDFKFHPEKGCAFVKYDT 344
Query: 252 KETATHAIESIHNTDINGHTVKCFWGK 278
E A AI + ++NG +KC WGK
Sbjct: 345 HERAALAIVQLSGFNVNGRQLKCGWGK 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 113/278 (40%), Gaps = 42/278 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L I L E F+ G + + +I+ D + + YAFV FV +A A A+
Sbjct: 46 LYVGGLPKSINEDALNEKFSASGPVFSVKILND-KNKQGFNYAFVEFVDEAGAAAALQEF 104
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG + ++ N++ ++ TF+ N PT ++ G +
Sbjct: 105 NGSSFENSMLKINYAY-----------------QSSTFNATQNSDDPT-YNIFVGDLSPE 146
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + K FS F ++ D++ + +GY FV F A A+ +++ +NG
Sbjct: 147 VDDESLHKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRA 206
Query: 272 VKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQ 331
++C W + NS AP PQ+ + P+ + LPQ
Sbjct: 207 IRCNWASHKQQNSR----GAPRQNNQRQFRPQYQRPGFNESPVPMPEQNNFGDAQFSLPQ 262
Query: 332 QFYQYGQLGYPQGYVG------------MVGRQVPGWQ 357
+ Q Q+ P +G +V RQ P WQ
Sbjct: 263 RPQQEQQM-MPNLAMGPNTGVMSPHSFDIVLRQTPSWQ 299
>gi|357479383|ref|XP_003609977.1| RNA-binding protein [Medicago truncatula]
gi|355511032|gb|AES92174.1| RNA-binding protein [Medicago truncatula]
Length = 245
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 6/192 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+E LL LFS G ++GCK+IR+ Y F+++ + AA A
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKE-KSSYGFVDYFDRSSAAIA 99
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + G ++DTS H+HIFVGDLSPE+ TL F+ +
Sbjct: 100 IVTLNGRNIFGQSIKVNWAYTRGQ--REDTSGHFHIFVGDLSPEVTDATLYACFSAYSSC 157
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D +T +S+G+ FVSF + EA++AI + G+WLGSR IR NW+T K M E
Sbjct: 158 SDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWAT-KGANMNGE 216
Query: 183 RKRQNSHTKTIT 194
Q+S +K++
Sbjct: 217 --NQSSESKSVV 226
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E F+ G + C+++R ++ Y FV + +
Sbjct: 38 PGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKS----SYGFVDYFDR 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ + +SI+ NW+ + +R+ + H
Sbjct: 94 SSAAIAIVTLNGRNIFGQSIKVNWAYTR-----GQREDTSGHFH---------------- 132
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + + D RV + +G+ FV F ++ A AI
Sbjct: 133 -IFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 191
Query: 262 IHNTDINGHTVKCFWGKESEN 282
+ + ++C W + N
Sbjct: 192 LTGKWLGSRQIRCNWATKGAN 212
>gi|444723404|gb|ELW64061.1| Nucleolysin TIA-1 [Tupaia chinensis]
Length = 387
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 109/185 (58%), Gaps = 35/185 (18%)
Query: 11 YVGNLDVSVTEELLCALFSQIGPVKGCKVI------------------------------ 40
YVGNL VTE L+ LFSQIGP K CK+I
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 64
Query: 41 ----REPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ GNDPY F+EF H AA ALAAMN R + KE+KVNWA++P +Q K+DTSNH+
Sbjct: 65 KIMGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHF 123
Query: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+D T KSKGY FVSF K + +
Sbjct: 124 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWQNQIGYPP 183
Query: 157 MNGQW 161
GQW
Sbjct: 184 PYGQW 188
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 58/191 (30%)
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP--------------------------- 131
+VG+LS ++ + + F+ G NC+++ D
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 64
Query: 132 ----QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQN 187
+T + Y FV F + A A+ AMNG+ + + ++ NW+T ++++K +
Sbjct: 65 KIMGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT----TPSSQKKDTS 120
Query: 188 SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------ 241
+H V+ G ++ E + F+PFG I D RV K+
Sbjct: 121 NHFH-----------------VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKS 163
Query: 242 KGYAFVKFTTK 252
KGY FV F K
Sbjct: 164 KGYGFVSFFNK 174
>gi|148807187|gb|ABR13303.1| putative oligouridylate-binding protein [Prunus dulcis]
Length = 233
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 137/234 (58%), Gaps = 21/234 (8%)
Query: 32 GPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQD 91
GP++GCK+IR+ Y F+++ AA A+ +N R + +KVNWA + + ++D
Sbjct: 6 GPLEGCKLIRKD-KSSYGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAYA--SSQRED 62
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
TS H++IFVGDLSPE+ TL F+ + S+ R++ D +T +S+G+ FVSF + +A+
Sbjct: 63 TSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQ 122
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT---------FDEVYNQS 202
+AI +NG+WLGSR IR NW+T+ T+ +Q+S +K++ E N+
Sbjct: 123 SAINDLNGKWLGSRQIRCNWATK---GATSNDDKQSSDSKSVVELTNGTSEDGQEKPNED 179
Query: 203 SPTN----CTVYCGGFGKDLNEELVSKVFSPF--GTIVDIRVFKEKGYAFVKFT 250
+P N TVY G ++ + + F GTI D+RV ++KG+ FV+F+
Sbjct: 180 APENNPQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRFS 233
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 49/237 (20%)
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G + C+++R ++ Y FV + + A AI +NG+ L + I+ NW+
Sbjct: 6 GPLEGCKLIRKDKS----SYGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAY-----A 56
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+++R+ + H +N ++ G ++ + + FS + + D RV
Sbjct: 57 SSQREDTSGH---------FN--------IFVGDLSPEVTDATLFACFSVYSSCSDARVM 99
Query: 240 ------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---------KESENNS 284
+ +G+ FV F +++ A AI ++ + ++C W K+S ++
Sbjct: 100 WDQKTGRSRGFGFVSFRSQQDAQSAINDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSK 159
Query: 285 TLAQPSAPTT----PQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYG 337
++ + + T+ +PN AP+ N Q Y A T+ L + F+ G
Sbjct: 160 SVVELTNGTSEDGQEKPNEDAPE----NNPQYTTVYVGNLAPEVTSVDLHRHFHSLG 212
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 145/283 (51%), Gaps = 13/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
+L++G+L + E L F G + KVIR ++ Y FLEF H A T L
Sbjct: 85 SLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQT 144
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + +E+ ++NWAS + + D++ H IFVGDL+ ++ L+E F + + +
Sbjct: 145 YNGTLMPNVEQNFRMNWASLGAGERRDDSAEH-TIFVGDLAADVTDYILQETFKSVYSSV 203
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F ++E A+T MNG +R +R + K P T +
Sbjct: 204 RGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQ 263
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ + T +S P N T++ GG + EE + +VFSP+G +V +++ K
Sbjct: 264 KATYQNPQAT------QGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGK 317
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FV+F T+ +A A+ S++ T + G +++ WG+ + T
Sbjct: 318 RCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQT 360
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQI-GPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ +L F + V+G KV+ R G Y F++F +
Sbjct: 171 DDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESE 230
Query: 59 AATALAAMNKRVFLEKEMKVNWASS--PGNQPKQDT------------SNHYHIFVGDLS 104
A+ MN + + M++ A++ P P++ T N+ IFVG L
Sbjct: 231 QLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLD 290
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P + + L++ F+P+GE+ + +IV K FV F +A AE A++++NG LG
Sbjct: 291 PTVAEEHLRQVFSPYGELVHVKIV------AGKRCGFVQFGTRASAEQALSSLNGTQLGG 344
Query: 165 RSIRTNWSTRKP 176
+SIR +W R P
Sbjct: 345 QSIRLSWG-RSP 355
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 35/197 (17%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
++P P + + +++GDL ++ L F GE+ + +++R+ QT +S+GY F
Sbjct: 70 TNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGF 129
Query: 142 VSFVKKAEAENAITAMNGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVY 199
+ F A AE + NG + + ++ R NW++ + +R +S TI
Sbjct: 130 LEFRSHAAAETILQTYNGTLMPNVEQNFRMNWAS-----LGAGERRDDSAEHTI------ 178
Query: 200 NQSSPTNCTVYCGGFGKDLNEELVSKVF-SPFGTIVDIRVF------KEKGYAFVKFTTK 252
+ G D+ + ++ + F S + ++ +V + KGY FVKF +
Sbjct: 179 ----------FVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADE 228
Query: 253 ETATHAIESIHNTDING 269
A+ T++NG
Sbjct: 229 SEQLRAM-----TEMNG 240
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 4 ESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES P TT++VG LD +V EE L +FS G + K++ F++F A
Sbjct: 276 ESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIV---AGKRCGFVQFGTRASAEQ 332
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQ 87
AL+++N + ++++W SP ++
Sbjct: 333 ALSSLNGTQLGGQSIRLSWGRSPSSK 358
>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]
Length = 844
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 182/393 (46%), Gaps = 70/393 (17%)
Query: 48 YAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI 107
Y F++++ A+ A+ ++ R + +KVNWA + G ++DTS H++IFVGDLSPE+
Sbjct: 184 YGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQ--REDTSGHFNIFVGDLSPEV 241
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
TL F+ F S+ R++ D +T +SKGY FVSF + +A++AI ++G+WLG+R I
Sbjct: 242 TDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQI 301
Query: 168 RTNWSTRKPPAMTNERKRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFG 215
R NW+T+ A NE K+ N + + E N+ +P N TVY G
Sbjct: 302 RCNWATKG--AGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLS 359
Query: 216 KDLNEELVSKVFSPF--------------------------------GTIVDIRVFKEKG 243
+ E++ +FS F G I ++R+ ++KG
Sbjct: 360 HEFLTEII--IFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGAGVIEEVRIQRDKG 417
Query: 244 YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS---------APTT 294
+ FV++ T E A AI+ + + G ++KC WG + T + P PT
Sbjct: 418 FGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTA 477
Query: 295 PQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGM-VGRQV 353
+P Y +Q+ QAAA + + L Q G G G +G+ G
Sbjct: 478 GINQGYSPAELLAYQRQLA--LSQAAASSLSGQALMQ---MTGHHGLAAGSMGVSSGGTQ 532
Query: 354 PGWQGIPGAQPTAQQMAV----AQAQPSMMAAY 382
+ G P + QQ+ V A ++P AY
Sbjct: 533 AMYDGYPN-NSSGQQLIVNIFMADSEPVCQPAY 564
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 149/286 (52%), Gaps = 12/286 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVA 59
DE++ TL++G+L + E L + FSQ G V K+IR + Y F+EF +H VA
Sbjct: 67 DEAR--TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVA 124
Query: 60 ATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF- 116
L N ++ + + K+NWA+S + + D + Y IFVGDL+ ++ L++ F
Sbjct: 125 EQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFK 184
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
+ + + ++V D T +SKGY FV F E A+T MNGQ+ SR++R ++ K
Sbjct: 185 SRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNK- 243
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
N Q S + S P N TV+ GG + +EL+ + FSP+G ++ +
Sbjct: 244 ---KNTGGPQPSSAIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYV 300
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
++ K FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 301 KIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQSIRLSWGRSPAN 346
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+ELL FS G + K+ P F+++ + A A+ +N
Sbjct: 271 TTVFVGGLDPSVTDELLKQTFSPYGELLYVKI---PVGKRCGFVQYSNRASAEEAIRVLN 327
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTS 93
+ ++++W SP N QP+Q+ S
Sbjct: 328 GSQLGGQSIRLSWGRSPANKQPQQEQS 354
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 13/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L +F G KVIR N + Y F+EFV+H A L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWA + +Q + +FVGDL+P++ L E F A + +
Sbjct: 141 YNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSV 200
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F ++E A+T MNGQ+ SR +RT + K P
Sbjct: 201 KGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQP 260
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
QN+ + +S PTN T++ G + + E+ + VF FG +V +++ K
Sbjct: 261 ASYQNTQGNS-------GESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGK 313
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FV++ + A A+ ++ T + G +++ WG+ N T
Sbjct: 314 RCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQT 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 ESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES PT T++VG +D SVTE+ L ++F Q G + K+ P F+++ + A
Sbjct: 272 ESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKI---PAGKRCGFVQYANRACAEQ 328
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
AL+ +N + ++++W SP N+ Q
Sbjct: 329 ALSVLNGTQLGGQSIRLSWGRSPSNKQTQ 357
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 13/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L +F G KVIR N + Y F+EFV+H A L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWA + +Q + +FVGDL+P++ L E F A + +
Sbjct: 141 YNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSV 200
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F ++E A+T MNGQ+ SR +RT + K P
Sbjct: 201 KGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQP 260
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
QN+ + +S PTN T++ G + + E+ + VF FG +V +++ K
Sbjct: 261 ASYQNTQGNS-------GESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGK 313
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FV++ + A A+ ++ T + G +++ WG+ N T
Sbjct: 314 RCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQT 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 ESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES PT T++VG +D SVTE+ L ++F Q G + K+ P F+++ + A
Sbjct: 272 ESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKI---PAGKRCGFVQYANRACAEQ 328
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
AL+ +N + ++++W SP N+ Q
Sbjct: 329 ALSVLNGTQLGGQSIRLSWGRSPSNKQTQ 357
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 23 LLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKV 78
+L +F+ GPV+ K+I + G Y F+E++ A TAL +N R + E++V
Sbjct: 1 MLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIRV 60
Query: 79 NWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
NWA G K+DT+NHYH+FVGDLSPE+ L +AF+ FG +S+ R++ D + KS+G
Sbjct: 61 NWAYQ-GTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRG 119
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
Y F++F K +AE AI MNG+WLGSR+IR NW+ +K
Sbjct: 120 YGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 156
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 30/176 (17%)
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
L E FA G + + +I+ D + + G Y FV ++ AE A+ +NG+ + IR
Sbjct: 2 LTEIFAVAGPVQHVKIIPD-RNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIRV 60
Query: 170 NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
NW+ + TN+ N + V+ G ++ ++++SK FS
Sbjct: 61 NWAYQ---GTTNKEDTTNHYH------------------VFVGDLSPEVTDDVLSKAFSA 99
Query: 230 FGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
FGT+ D RV K +GY F+ F K A AI +++ + ++ W +
Sbjct: 100 FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 155
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 195 FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKET 254
+++V Q+ P N TVY G + + +F G + +IR+ ++G+AFVK + E
Sbjct: 232 YEQVLAQAPPHNTTVYVGNLPSYATQSDLIPLFQTIGYVSEIRIQADRGFAFVKLESHEA 291
Query: 255 ATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP----QPNSTAPQF 304
A AI + + G +KC WGK+ T + P A TP P S+ P +
Sbjct: 292 AAAAIVQLQGHLVQGRPIKCSWGKDRAAGDT-STPVASMTPTGTSSPYSSMPMY 344
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
++VG+L VT+++L FS G + +V+ + + Y FL F T A A+A M
Sbjct: 79 VFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 67 NKRVFLEKEMKVNWAS 82
N + ++VNWA+
Sbjct: 139 NGEWLGSRAIRVNWAN 154
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+YVGNL T+ L LF IG V ++ + G +AF++ H AA A+ +
Sbjct: 244 TTVYVGNLPSYATQSDLIPLFQTIGYVSEIRIQADRG---FAFVKLESHEAAAAAIVQLQ 300
Query: 68 KRVFLEKEMKVNWA 81
+ + +K +W
Sbjct: 301 GHLVQGRPIKCSWG 314
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 150/286 (52%), Gaps = 11/286 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVA 59
DE++ TL++G+L + E L + FSQ G V K+IR + Y F+EF +H +A
Sbjct: 69 DEAR--TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALA 126
Query: 60 ATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF- 116
L N ++ + + K+NWA+S + + D + Y IFVGDL+ ++ L++ F
Sbjct: 127 EQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFK 186
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
+ + + + ++V D T +SKGY FV F E A+T MNGQ+ SR +R ++ K
Sbjct: 187 SRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKK 246
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
+ + T D + S P N TV+ GG + +EL+ + FSP+G ++ +
Sbjct: 247 NTGGQPQPSSTIYQNTQGTD---SDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYV 303
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
++ K FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 304 KIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPAN 349
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+ T++VG+L VT+ +L F P VK KV+ R G Y F++F
Sbjct: 160 DDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDE 219
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP---GNQPKQDTS--------------NHYHIFVG 101
A+ MN + + M++ AS+ G QP+ ++ N+ +FVG
Sbjct: 220 QTRAMTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNNTTVFVG 279
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
L P + + LK+ F+P+GE+ +I K FV + +A AE AI +NG
Sbjct: 280 GLDPSVTDELLKQTFSPYGELLYVKIP------VGKRCGFVQYSNRASAEEAIRMLNGSQ 333
Query: 162 LGSRSIRTNWSTRKPPAMTNERKRQN 187
LG +SIR +W + PA ++ QN
Sbjct: 334 LGGQSIRLSWG--RSPANKQPQQEQN 357
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+ELL FS G + K+ P F+++ + A A+ +N
Sbjct: 274 TTVFVGGLDPSVTDELLKQTFSPYGELLYVKI---PVGKRCGFVQYSNRASAEEAIRMLN 330
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ ++++W SP N+ Q N +
Sbjct: 331 GSQLGGQSIRLSWGRSPANKQPQQEQNQW 359
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 150/310 (48%), Gaps = 43/310 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--------------YAFLEFV 54
TL++G+L+ EE + L+ Q+G K+IR N Y F+EF
Sbjct: 53 TLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEFE 112
Query: 55 HHTVAATALAAMNKRVFLE---KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQT 111
H A ALA +N + + ++NWAS P Q + + Y +FVGDLSP
Sbjct: 113 RHEDALQALA-LNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTEAH 171
Query: 112 LKEAFAP-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L F P + I + R++ DP T S+ + FV F ++ + + A+ M+G WLG R IR
Sbjct: 172 LLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIRVA 231
Query: 171 WSTRK----------------PPA-MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGG 213
+T + P A M + NS ++ I YN PTN TV+ GG
Sbjct: 232 LATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNI-----YND--PTNSTVFVGG 284
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++EE + +F PFG+I I++ + KG FVKF+T+E A +AI +H I G V+
Sbjct: 285 LAAGVSEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAISGMHGFLIGGSRVR 344
Query: 274 CFWGKESENN 283
WG+ S N
Sbjct: 345 LSWGRSSLPN 354
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+T++VG L V+EE L LF G + K+ R G F++F A A++ M+
Sbjct: 278 STVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRGKG---CGFVKFSTREEAENAISGMH 334
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ ++++W S + P Q T +H H
Sbjct: 335 GFLIGGSRVRLSWGRS--SLPNQHTHSHPH 362
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 13/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L +FS G KVIR + + Y F+EFV+H A L A
Sbjct: 82 SLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQA 141
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWA + +Q + +FVGDL+P++ L E F A + +
Sbjct: 142 YNGTTMPSSDQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSV 201
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F ++E A+T MNGQ+ SR +RT + K P
Sbjct: 202 KGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQP 261
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
QN+ +S PTN T++ G + + E+ + VF FG +V +++ K
Sbjct: 262 ASYQNTQGNQ-------GESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGK 314
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
FV++ + A A+ ++ T + G +++ WG+ N T
Sbjct: 315 RCGFVQYANRACAEQALSLLNGTQLGGQSIRLSWGRSPSNKQT 357
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 4 ESQPT--TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES PT T++VG LD SV E+ L ++F Q G + K+ P F+++ + A
Sbjct: 273 ESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKI---PAGKRCGFVQYANRACAEQ 329
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
AL+ +N + ++++W SP N+ Q
Sbjct: 330 ALSLLNGTQLGGQSIRLSWGRSPSNKQTQ 358
>gi|94442922|emb|CAJ91135.1| oligouridylate binding protein [Platanus x acerifolia]
Length = 229
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 133/234 (56%), Gaps = 21/234 (8%)
Query: 32 GPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQD 91
GP++GCK+IR+ N Y F+++ AA A+ +N R + +KVNWA + G ++D
Sbjct: 2 GPLEGCKLIRKE-NSSYGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWAYASGQ--RED 58
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
TS H++IFVGDLSPE+ TL + + S+ R++ D +T +S+G+ FVSF + +A+
Sbjct: 59 TSGHFNIFVGDLSPEVTDATLFACLSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 118
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT---------FDEVYNQS 202
+AI + G+WLGSR IR NW+ + A + +QN+ K++ E N
Sbjct: 119 SAINDLTGKWLGSRQIRCNWAAKGAGANDD---KQNTDAKSVVELTSGTSEDGQETINDD 175
Query: 203 SPTN----CTVYCGGFGKDLNEELVSKVFSPF--GTIVDIRVFKEKGYAFVKFT 250
+P N TVY G ++ + + + F G I ++RV ++KG+ FV+++
Sbjct: 176 APENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYS 229
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 32/163 (19%)
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G + C+++R ++ Y FV + + A AI +NG+ L ++I+ NW+
Sbjct: 2 GPLEGCKLIRK----ENSSYGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWAY-----A 52
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ +R+ + H +N ++ G ++ + + S + + D RV
Sbjct: 53 SGQREDTSGH---------FN--------IFVGDLSPEVTDATLFACLSVYPSCSDARVM 95
Query: 240 ------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
+ +G+ FV F ++ A AI + + ++C W
Sbjct: 96 WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 138
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
Query: 23 LLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWA- 81
+L +F+ +GPV G K+I N Y F+EF VA A+ MN R E++ NWA
Sbjct: 1 MLHEIFATVGPVAGVKIITGAVN--YGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANWAQ 58
Query: 82 --SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGY 139
SS K+DT++H+HIFVGDL+PEI +TL +AF+ FG +S ++ DP + KS+G+
Sbjct: 59 PSSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSRGF 118
Query: 140 AFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
FV+F KA+AE AI MNG+WLGSR +R NW+T+K
Sbjct: 119 GFVAFRDKADAEKAIATMNGEWLGSRPVRCNWATQK 154
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 38/201 (18%)
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
L E FA G ++ +I+ + Y FV F AE AI MNG+ + + IR NW
Sbjct: 2 LHEIFATVGPVAGVKIITG-----AVNYGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANW 56
Query: 172 STRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+ + +S +TI D ++ ++ G ++ E +++ FS FG
Sbjct: 57 A-----------QPSSSVQQTIKEDTTHH------FHIFVGDLAPEITNETLAQAFSVFG 99
Query: 232 TIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
T+ + V K +G+ FV F K A AI +++ + V+C W +
Sbjct: 100 TMSEAHVMWDPMSGKSRGFGFVAFRDKADAEKAIATMNGEWLGSRPVRCNWATQK----- 154
Query: 286 LAQPSAPTTPQPNSTAPQFPY 306
Q + P PQP Q PY
Sbjct: 155 -GQTAMP-VPQPGQ---QLPY 170
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVA 59
D + ++VG+L +T E L FS G + V+ +P + + F+ F A
Sbjct: 70 DTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSRGFGFVAFRDKADA 129
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGN------QPKQDTSNHY----------HIFVGDL 103
A+A MN + ++ NWA+ G QP Q I+VG++
Sbjct: 130 EKAIATMNGEWLGSRPVRCNWATQKGQTAMPVPQPGQQLPYEIVVQQTPAYVTSIYVGNI 189
Query: 104 SPEIETQTLK 113
P + + K
Sbjct: 190 PPHVSRKLKK 199
>gi|190345927|gb|EDK37898.2| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 142/305 (46%), Gaps = 34/305 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T LYVGN+ +V E+ L LF + VK +PG + YAF+EF A + L A N
Sbjct: 78 TVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFN-YAFVEFDTREDAESVLTAFN 136
Query: 68 KRVFLEKEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+K+NWA SS + S Y IFVGDLS E++ +TL +AF F
Sbjct: 137 GSEVGGSSIKINWAYQSSTISTSSSPESPLYTIFVGDLSAEVDDETLGKAFDQFPSRKQA 196
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS----------TRK 175
++ D QT +S+GY FVSF AEAENA+ M G ++G R+IR NW+ TR
Sbjct: 197 HVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIRCNWASHRHMYQKKNTRP 256
Query: 176 PPAM---------------------TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
PP TN R +F+ V Q+ TVY G
Sbjct: 257 PPKRSASAGATTPPSPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYLGNI 316
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
+ + + FG IVD + KG AFVK+ + E A AI + +NG +KC
Sbjct: 317 AHFTHSSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNGRPLKC 376
Query: 275 FWGKE 279
WG++
Sbjct: 377 GWGRD 381
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG--YAFVKFTTKETATHAIESI 262
+N +Y G K +NE+ + ++F ++ + + G YAFV+F T+E A + +
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 263 HNTDINGHTVKCFW 276
+ +++ G ++K W
Sbjct: 136 NGSEVGGSSIKINW 149
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FSQ G + K+IR + Y F+EF H +A L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ + K+NWA+S + + D + Y IFVGDL+ ++ L++ F A + +
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSV 187
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNGQ+ SR +R ++ K + +
Sbjct: 188 KGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKK-NIGGQ 246
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ ++ T D + S P N TV+ GG + +E++ + FSP+G +V +++ K
Sbjct: 247 QQPSATYQNTQGTD---SDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGN 343
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L FS G + K+ P F+++ + A A+ +N
Sbjct: 268 TTVFVGGLDPSVTDEVLKQAFSPYGELVYVKI---PVGKRCGFVQYSNRASAEEAIRMLN 324
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQD 91
+ ++++W SPGN QP+QD
Sbjct: 325 GSQLGGQSIRLSWGRSPGNKQPQQD 349
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FSQ G + K+IR + Y F+EF H +A L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ + K+NWA+S + + D + Y IFVGDL+ ++ L++ F A + +
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSV 187
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNGQ+ SR +R ++ K + +
Sbjct: 188 KGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKK-NIGGQ 246
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ ++ T D + S P N TV+ GG + +E++ + FSP+G +V +++ K
Sbjct: 247 QQPSATYQNTQGTD---SDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGN 343
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L FS G + K+ P F+++ + A A+ +N
Sbjct: 268 TTVFVGGLDPSVTDEVLKQAFSPYGELVYVKI---PVGKRCGFVQYSNRASAEEAIRMLN 324
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQD 91
+ ++++W SPGN QP+QD
Sbjct: 325 GSQLGGQSIRLSWGRSPGNKQPQQD 349
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FSQ G + K+IR + Y F+EF H +A L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ + K+NWA+S + + D + Y IFVGDL+ ++ L++ F A + +
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSV 187
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNGQ+ SR +R ++ K + +
Sbjct: 188 KGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKK-NIGGQ 246
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ ++ T D + S P N TV+ GG + +E++ + FSP+G +V +++ K
Sbjct: 247 QQPSATYQNTQGTD---SDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGN 343
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L FS G + K+ P F+++ + A A+ +N
Sbjct: 268 TTVFVGGLDPSVTDEVLKQAFSPYGELVYVKI---PVGKRCGFVQYSNRASAEEAIRMLN 324
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQD 91
+ ++++W SPGN QP+QD
Sbjct: 325 GSQLGGQSIRLSWGRSPGNKQPQQD 349
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 23/296 (7%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAAT 61
S+ +L++G+L + E + ++F+Q G + KVIR ++ Y F+EF++H+VA
Sbjct: 61 SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAER 120
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAP 118
L N E+ ++NWA + + + T H IFVGDL+PE+ L + F
Sbjct: 121 VLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKN 180
Query: 119 -FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-- 175
+G + ++V D T +SKGY FV F + E A+T MNGQ+ +R +R + K
Sbjct: 181 VYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNA 240
Query: 176 ---PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
PAM + N+ S P N T++ GG ++ ++ + +F FG
Sbjct: 241 LPMQPAMYQNTQGGNA-----------GDSDPNNTTIFVGGLDANVTDDELKSIFGQFGE 289
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
++ +++ K FV++ + TA HA+ ++ T + G +++ WG+ AQ
Sbjct: 290 LLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSPNKQPDQAQ 345
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 165/342 (48%), Gaps = 25/342 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGN---DPYAFLEFVHHTVAATAL 63
+L++G+L + E L F+ +GP V K+IR + Y F+EF A AL
Sbjct: 115 SLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAEYAL 174
Query: 64 AAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
A+ N ++ K+NWAS+ + D + + IFVGDL+ ++ L+E F A +
Sbjct: 175 ASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSMLQEIFKASYP 234
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +V D T +SKGY FV F E A+T MNG L SR +R + K T
Sbjct: 235 SVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIGPAANKKNMGT 294
Query: 181 NERKRQNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ N + +++ ++V Q+ P N T++ GG +++E + +VF+P+G + +++
Sbjct: 295 QQTYSTNGYQSQSSQGNDV--QNDPNNTTIFVGGLDSNIDENYLRQVFTPYGEVGYVKIP 352
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
K FV+FT++ A AI +++ T I G+ V+ WG+ ++N PQ ++
Sbjct: 353 VGKRCGFVQFTSRSCAEEAINALNGTPIGGNNVRLSWGRSTQNKQ---------APQQDA 403
Query: 300 TAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGY 341
Y Q G A Y A AQ P YG GY
Sbjct: 404 NQGNGSNYYGYQQG----NDAYYGAPNAQDP-SMQNYGYSGY 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+ T++VG+L VT+ +L +F P V+G V+ R G Y F+ F
Sbjct: 204 DDGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNE 263
Query: 59 AATALAAMNKRVFLEKEMKVNWA--------------------SSPGNQPKQDTSNHYHI 98
A+ MN +++++ A SS GN + D N+ I
Sbjct: 264 QTRAMTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNGYQSQSSQGNDVQNDP-NNTTI 322
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVG L I+ L++ F P+GE+ +I K FV F ++ AE AI A+N
Sbjct: 323 FVGGLDSNIDENYLRQVFTPYGEVGYVKIP------VGKRCGFVQFTSRSCAEEAINALN 376
Query: 159 GQWLGSRSIRTNW 171
G +G ++R +W
Sbjct: 377 GTPIGGNNVRLSW 389
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD ++ E L +F+ G V K+ P F++F + A A+ A+N
Sbjct: 320 TTIFVGGLDSNIDENYLRQVFTPYGEVGYVKI---PVGKRCGFVQFTSRSCAEEAINALN 376
Query: 68 KRVFLEKEMKVNWASSPGNQ--PKQDT-----SNHY 96
++++W S N+ P+QD SN+Y
Sbjct: 377 GTPIGGNNVRLSWGRSTQNKQAPQQDANQGNGSNYY 412
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 171/375 (45%), Gaps = 43/375 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L
Sbjct: 23 TLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERILQT 82
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDLSP++ L+E F A + +
Sbjct: 83 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDVTDYLLQETFRANYPSV 142
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 143 RGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCSTRPMRISAAT---PKKTAA 199
Query: 183 RKRQNSHTKTITFDEVYN--------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
++Q + K I Y + TN T++ G ++ EE + +F FG IV
Sbjct: 200 YQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEEELRPIFLQFGEIV 259
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTT 294
+++ +G FV+F T+ +A AI+ + I V+ WG++ ++ +
Sbjct: 260 YVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRISWGRKQARSTLILD------ 313
Query: 295 PQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL-GYPQGYVGMVGRQV 353
Q+ Y GY AY A Q P Y YG GYPQ +QV
Sbjct: 314 --------QWSAYYGYGQGY-----DAYAYGATQDP-SLYAYGAYAGYPQ-----YPQQV 354
Query: 354 PGWQGIPGAQPTAQQ 368
G Q + GA P +Q
Sbjct: 355 DGVQDMTGAIPVVEQ 369
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VTEE L +F Q G + K+ P F++F A A+ M
Sbjct: 232 TTIFVGNLDPNVTEEELRPIFLQFGEIVYVKI---PVGRGCGFVQFATRASAEEAIQRMQ 288
Query: 68 KRVFLEKEMKVNWA 81
V ++ ++++W
Sbjct: 289 GHVIGQQPVRISWG 302
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 10/280 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FSQ G + K+IR + Y F+EF H +A L
Sbjct: 112 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 171
Query: 66 MNKRVFLEKE--MKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ K+NWA+S + + D + Y IFVGDL+ ++ L++ F A + +
Sbjct: 172 YNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSV 231
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNGQ+ SR +R ++ K + +
Sbjct: 232 KGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKK-NIGGQ 290
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ ++ T D + S P N TV+ GG + +E++ + FSP+G +V +++ K
Sbjct: 291 QQPSATYQNTQGTD---SDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 347
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+++ + +A AI ++ + + G +++ WG+ N
Sbjct: 348 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGN 387
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L FS G + K+ P F+++ + A A+ +N
Sbjct: 312 TTVFVGGLDPSVTDEVLKQAFSPYGELVYVKI---PVGKRCGFVQYSNRASAEEAIRMLN 368
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQD 91
+ ++++W SPGN QP+QD
Sbjct: 369 GSQLGGQSIRLSWGRSPGNKQPQQD 393
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 67 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRYAALA 125
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + ++DTS H++IFVGDL PE+ L F+ +
Sbjct: 126 IVSLNGRQLFGQPIKVNWAYA--STQREDTSGHFNIFVGDLCPEVTDAALFVFFSAYSTC 183
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
S+ R++ D Q+ +S+G+ FVSF + +A+ AI +NG+WLG+R IR NW+T+ A E
Sbjct: 184 SDARVMWDQQSGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIRCNWATKG--ANAGE 241
Query: 183 RKRQNSHTKTITF--------DEVYNQSSPTN----CTVYCGGFGKDL 218
K+ + E N+ P + TVY G D+
Sbjct: 242 VKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGNLSHDV 289
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ ++ L E F G + C+++R ++ + FV + +
Sbjct: 64 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS----SFGFVDYYDR 119
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H +N
Sbjct: 120 RYAALAIVSLNGRQLFGQPIKVNWAY-----ASTQREDTSGH---------FN------- 158
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D RV + +G+ FV F ++ A AI
Sbjct: 159 -IFVGDLCPEVTDAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQQDAQTAINE 217
Query: 262 IHNTDINGHTVKCFWGKESENNSTLAQ 288
++ + ++C W + N + Q
Sbjct: 218 LNGKWLGNRQIRCNWATKGANAGEVKQ 244
>gi|8778484|gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
Length = 575
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 53/305 (17%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VTE LL +F+ GPV+ CK+IR+ Y F+ + A A
Sbjct: 142 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKE-KSSYGFVHYFDRRSAGLA 200
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS+H++IFVGDLSPE+ L F+ +
Sbjct: 201 ILSLNGRHLFGQPIKVNWAYASGQ--REDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTC 258
Query: 123 S-------------NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM------------ 157
S + R++ D +T +S+G+ FVSF + +A+ AI +
Sbjct: 259 SFAETLPTIAIVCRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGECCNLFSPLI 318
Query: 158 -------NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTIT---------FDEVYNQ 201
+G+WLGSR IR NW+T+ T+ +Q+S +K++ + N
Sbjct: 319 VDILFCFSGKWLGSRQIRCNWATK---GATSGEDKQSSDSKSVVELTSGVSEDGKDTTNG 375
Query: 202 SSPTN----CTVYCGGFGKDLNEELVSKVFSPF--GTIVDIRVFKEKGYAFVKFTTKETA 255
+P N TVY G ++++ + + F G I ++RV ++KG+ FV+++T A
Sbjct: 376 EAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEA 435
Query: 256 THAIE 260
AI+
Sbjct: 436 ALAIQ 440
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E FA G + +C+++R ++ Y FV + +
Sbjct: 139 PGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKS----SYGFVHYFDR 194
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFD---EVYNQSSP 204
A AI ++NG+ L + I+ NW+ + +R+ +SH D EV +
Sbjct: 195 RSAGLAILSLNGRHLFGQPIKVNWAY-----ASGQREDTSSHFNIFVGDLSPEVTDAMLF 249
Query: 205 TNCTVY--CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESI 262
T +VY C F + L ++ V + D + + +G+ FV F ++ A AI+ I
Sbjct: 250 TCFSVYPTC-SFAETL--PTIAIVCRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEI 306
Query: 263 HNTDINGHT------VKCFWGK 278
N + + CF GK
Sbjct: 307 TGECCNLFSPLIVDILFCFSGK 328
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 142/308 (46%), Gaps = 40/308 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T LYVGN+ +V E+ L LF + VK +PG + YAF+EF A + L A N
Sbjct: 78 TVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFN-YAFVEFDTREDAESVLTAFN 136
Query: 68 KRVFLEKEMKVNWAS-----SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+K+NWA S + P+ Y IFVGDLS E++ +TL +AF F
Sbjct: 137 GSEVGGSSIKINWAYQLSTISTSSSPELPL---YTIFVGDLSAEVDDETLGKAFDQFPSR 193
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS---------- 172
++ D QT +S+GY FVSF AEAENA+ M G ++G R+IR NW+
Sbjct: 194 KQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRCNWASHRHMYQKKN 253
Query: 173 TRKPPAM---------------------TNERKRQNSHTKTITFDEVYNQSSPTNCTVYC 211
TR PP TN R +F+ V Q+ TVY
Sbjct: 254 TRPPPKRSASAGATTPPLPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYL 313
Query: 212 GGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
G + + + FG IVD + KG AFVK+ + E A AI + +NG
Sbjct: 314 GNIAHFTHLSDLIPLLQNFGFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNGRP 373
Query: 272 VKCFWGKE 279
+KC WG++
Sbjct: 374 LKCGWGRD 381
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG--YAFVKFTTKETATHAIESI 262
+N +Y G K +NE+ + ++F ++ + + G YAFV+F T+E A + +
Sbjct: 76 SNTVLYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 263 HNTDINGHTVKCFWGKESENNSTLAQPSAP 292
+ +++ G ++K W + ST + P P
Sbjct: 136 NGSEVGGSSIKINWAYQLSTISTSSSPELP 165
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 19/287 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + A F+ G ++ K+IR+ Y F+EF H A L
Sbjct: 96 TLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQT 155
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + +E+ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 156 YNGAMMPNVEQTYRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSV 212
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F +E A+T MNG SR +R PA
Sbjct: 213 KGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIG------PAAN-- 264
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+K K + V + S P+N T++ GG + ++++ +VF+P+G +V +++ K
Sbjct: 265 KKATGVQEKVPSAQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGK 324
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
FV+F + +A A+ + T I G V+ WG+ N AQP
Sbjct: 325 RCGFVQFANRASADEALVLLQGTLIGGQNVRLSWGRSPSNRQ--AQP 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ + + Y F++F +
Sbjct: 180 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSE 239
Query: 59 AATALAAMNKRVFLEKEMKVNWA-------------SSPGNQPKQDTSNHYHIFVGDLSP 105
A A+ MN V + M++ A S+ G Q D SN IFVG L P
Sbjct: 240 QARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNT-TIFVGGLDP 298
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ LK+ F P+G++ + +I K FV F +A A+ A+ + G +G +
Sbjct: 299 SVTDDMLKQVFTPYGDVVHVKIP------VGKRCGFVQFANRASADEALVLLQGTLIGGQ 352
Query: 166 SIRTNWSTRKPPAMTNERKRQNSH 189
++R +W + P+ + +Q+S+
Sbjct: 353 NVRLSWG--RSPSNRQAQPQQDSN 374
>gi|149067622|gb|EDM17174.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_b [Rattus norvegicus]
Length = 124
Score = 148 bits (373), Expect = 6e-33, Method: Composition-based stats.
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVA 59
M D+ QP TLYVGNL VTE L+ LFSQIGP K CK+I E NDPY F+EF H A
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 61
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
A ALAAMN R L KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPF
Sbjct: 62 AAALAAMNGRKILGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKSAFAPF 120
Query: 120 GEIS 123
G+IS
Sbjct: 121 GKIS 124
Score = 45.1 bits (105), Expect = 0.063, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
+D ++VG+LS ++ + + F+ G +C+++ + + + Y FV F + +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRD 60
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
A A+ AMNG+ + + ++ NW+T ++++K ++H V
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATTP----SSQKKDTSNHFH-----------------V 99
Query: 210 YCGGFGKDLNEELVSKVFSPFGTI 233
+ G ++ E + F+PFG I
Sbjct: 100 FVGDLSPEITTEDIKSAFAPFGKI 123
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 23/292 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+L++G+L + E + ++F+Q G KVIR ++ Y F+EFV H+VA L
Sbjct: 61 SLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQT 120
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAP-FGE 121
N E+ ++NWA + + + T H IFVGDL+PE+ L + F +G
Sbjct: 121 YNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGS 180
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-----P 176
+ ++V D T +SKGY FV F + E A+T MNGQ+ +R +R + K
Sbjct: 181 VKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ 240
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
PAM + N+ + P N T++ GG ++ ++ + +F FG ++ +
Sbjct: 241 PAMYQNTQGANA-----------GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHV 289
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
++ K FV++ K +A HA+ ++ T + G +++ WG+ S AQ
Sbjct: 290 KIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQ 341
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 85 GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
G+Q S+ +++GDL ++ + FA GE ++ +++R+ T +S+GY F+ F
Sbjct: 49 GSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEF 108
Query: 145 VKKAEAENAITAMNGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQS 202
V + AE + NG + S ++ R NW+ A E++ Q+
Sbjct: 109 VSHSVAERVLQTYNGAPMPSTEQTFRLNWAQ----AGAGEKRF---------------QT 149
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVF-SPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
+ T++ G ++ + ++S F + +G++ +V + KGY FV+F +
Sbjct: 150 EGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQ 209
Query: 256 THAIESIHNTDINGH 270
A+ T++NG
Sbjct: 210 MRAM-----TEMNGQ 219
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 23/292 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+L++G+L + E + ++F+Q G KVIR ++ Y F+EFV H+VA L
Sbjct: 61 SLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQT 120
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAP-FGE 121
N E+ ++NWA + + + T H IFVGDL+PE+ L + F +G
Sbjct: 121 YNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGS 180
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-----P 176
+ ++V D T +SKGY FV F + E A+T MNGQ+ +R +R + K
Sbjct: 181 VKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ 240
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
PAM + N+ + P N T++ GG ++ ++ + +F FG ++ +
Sbjct: 241 PAMYQNTQGANA-----------GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHV 289
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
++ K FV++ K +A HA+ ++ T + G +++ WG+ S AQ
Sbjct: 290 KIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQ 341
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 85 GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
G+Q S+ +++GDL ++ + FA GE ++ +++R+ T +S+GY F+ F
Sbjct: 49 GSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEF 108
Query: 145 VKKAEAENAITAMNGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQS 202
V + AE + NG + S ++ R NW+ A E++ Q+
Sbjct: 109 VSHSVAERVLQTYNGAPMPSTEQTFRLNWAQ----AGAGEKRF---------------QT 149
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVF-SPFGTIVDIRVF------KEKGYAFVKFTTKETA 255
+ T++ G ++ + ++S F + +G++ +V + KGY FV+F +
Sbjct: 150 EGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQ 209
Query: 256 THAIESIHNTDINGH 270
A+ T++NG
Sbjct: 210 MRAM-----TEMNGQ 219
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 13/287 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+Q G V KVIR ++ Y F+EF H A L +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQS 139
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQD------TSNHYHIFVGDLSPEIETQTLKEAFA 117
N + E+ ++NW++ + + D + + IFVGDL+ ++ L++ F+
Sbjct: 140 YNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFS 199
Query: 118 P-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
+ + ++V D T +SKGY FV F ++E A+T MNG + SR++R +T K
Sbjct: 200 SRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKK 259
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P+ + Q H + S +N TV+ GG D+ +E + + FS FG +V
Sbjct: 260 PSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVS 319
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+++ KG FV+F+ + A AIE ++ T I TV+ WG+ N
Sbjct: 320 VKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPAN 366
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD VT+E L FSQ G V K+ P F++F + A A+ +N
Sbjct: 291 TTVFVGGLDSDVTDEELRQSFSQFGNVVSVKI---PAGKGCGFVQFSERSAAEDAIEKLN 347
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
V + ++++W +P N Q + D+ + ++
Sbjct: 348 GTVIGTQTVRLSWGRNPANKQFRTDSGSQWN 378
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ Y F+EF A L
Sbjct: 99 TLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQT 158
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N EM ++NWAS+ K+D Y IFVGDL+ ++ L+E F + +
Sbjct: 159 YNGATMPNVEMPYRLNWASA---GEKRDDGPDYTIFVGDLAADVTDYILQETFRVHYPSV 215
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R PA N+
Sbjct: 216 KGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRIG------PA-ANK 268
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+K + K + V + S P+N T++ GG ++ E+++ +VF+P+G +V +++ K
Sbjct: 269 QKVSGAQEKVPSAQGVQSDSDPSNTTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGK 328
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ ++ ++ A+ + T I G V+ WG+ N
Sbjct: 329 RCGFVQYASRSSSEEALLMLQGTVIGGQNVRLSWGRSPSN 368
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI------REPGNDPYAFLEFVH 55
D+ T++VG+L VT+ +L F P VKG KV+ R G Y F++F
Sbjct: 183 DDGPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKLTMRSKG---YGFVKFSD 239
Query: 56 HTVAATALAAMNKRVFLEKEMKVNWA--------------SSPGNQPKQDTSNHYHIFVG 101
T A+ MN V + M++ A S+ G Q D SN IFVG
Sbjct: 240 PTEQTRAMTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPSAQGVQSDSDPSNT-TIFVG 298
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
L P + LK+ FAP+GE+ + +I K FV + ++ +E A+ + G
Sbjct: 299 GLDPNVTEDMLKQVFAPYGEVVHVKIP------VGKRCGFVQYASRSSSEEALLMLQGTV 352
Query: 162 LGSRSIRTNWSTRKP 176
+G +++R +W R P
Sbjct: 353 IGGQNVRLSWG-RSP 366
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L +F+ G V K+ P F+++ + + AL +
Sbjct: 293 TTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKI---PVGKRCGFVQYASRSSSEEALLMLQ 349
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
V + ++++W SP N+
Sbjct: 350 GTVIGGQNVRLSWGRSPSNK 369
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 16/286 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ Y F+EF A L
Sbjct: 84 TLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQT 143
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + EM ++NWA++ K D Y IFVGDL+ ++ L+E F A + +
Sbjct: 144 FNGAMMPNVEMAYRLNWATA---GEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSV 200
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R PA N+
Sbjct: 201 KGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIG------PA-ANK 253
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+K K T + + P+N T++ GG E+++ +VF+P+G +V +++ K
Sbjct: 254 QKANGVQEKVPTAQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGK 313
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
FV++ ++ +A A+ + T I G V+ WG+ N +Q
Sbjct: 314 RCGFVQYASRSSAEEALLMLQGTMIEGQNVRLSWGRSPSNKQVQSQ 359
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREP---GNDPYAFLEFVHHTV 58
D+ T++VG+L VT+ LL F +Q VKG KV+ + + Y F++F T
Sbjct: 168 DDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTE 227
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP--------------GNQPKQDTSNHYHIFVGDLS 104
A+ MN + + M++ A++ G Q D SN IFVG L
Sbjct: 228 QTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTAQGIQTDNDPSNS-TIFVGGLD 286
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P LK+ F P+GE+ + +I K FV + ++ AE A+ + G +
Sbjct: 287 PSATEDVLKQVFTPYGEVVHVKIP------VGKRCGFVQYASRSSAEEALLMLQGTMIEG 340
Query: 165 RSIRTNWSTRKP 176
+++R +W R P
Sbjct: 341 QNVRLSWG-RSP 351
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 12/286 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPG-NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G V KVI ++ G ++ Y F+EF HT A L
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA+ N + DT + IFVGDL+ ++ L+E F+ + +
Sbjct: 161 YNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSV 220
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA---- 178
++V D + +SKGY FV F + E A+T MNG + SR +R +T K +
Sbjct: 221 KGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQ 280
Query: 179 --MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
+ H + + S N T++ GG D+++E + + FS FG +V +
Sbjct: 281 GYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSV 340
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
++ KG FV+F ++ A AI+ ++ T I TV+ WG+ + N
Sbjct: 341 KIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGN 386
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D +++VG+L VT+ +L F S+ VKG KV+ + + Y F+ F
Sbjct: 188 DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENE 247
Query: 59 AATALAAMNKRVFLEKEMKVNWASS-----------------PGNQPK---------QDT 92
A+ MN + M++ A+ G P
Sbjct: 248 RTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSE 307
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
SN+ IFVG L ++ + LK+AF+ FG++ + +I KG FV F + AE+
Sbjct: 308 SNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIP------IGKGCGFVQFANRKNAED 361
Query: 153 AITAMNGQWLGSRSIRTNW 171
AI +NG +G +++R +W
Sbjct: 362 AIQGLNGTVIGKQTVRLSW 380
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES TT++VG LD V++E L FS+ G V K+ P F++F + A A+
Sbjct: 307 ESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKI---PIGKGCGFVQFANRKNAEDAI 363
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
+N V ++ ++++W S GN Q + D++N ++
Sbjct: 364 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN 398
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 15/292 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L F G V+ K+IR ++ Y F+EFV H A L A
Sbjct: 44 TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKILQA 103
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + + + IFVGDL+P++ L+E F + +
Sbjct: 104 YNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSV 163
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A++ MNG + SR +R + +T K N+
Sbjct: 164 KGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGPNQ 223
Query: 183 RKRQNSHTKTITFDEVYNQSSP---------TNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ S T+ Q SP N T++ GG + +E + VF FG +
Sbjct: 224 LNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGEL 283
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
V +++ KG FV+FT + A A++ +H T I V+ WG+ N T
Sbjct: 284 VYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQT 335
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V +E L +F Q G + K+ P F++F H A AL ++
Sbjct: 257 TTIFVGGLDPAVGDEDLRNVFGQFGELVYVKI---PAGKGCGFVQFTHRACAEEALQRLH 313
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ V + ++++W SPGN+ D + +H
Sbjct: 314 QTVIGTQAVRLSWGRSPGNKQTSDPAWGHH 343
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 145/308 (47%), Gaps = 19/308 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L F G V+ K+IR ++ Y F+EFV H A L A
Sbjct: 9 TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQA 68
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + + + IFVGDL+P++ L+E F + +
Sbjct: 69 YNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSV 128
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP---PAM 179
++V D T +SKGY FV F + E A++ MNG + SR +R + +T K PA
Sbjct: 129 KGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQ 188
Query: 180 TNERKRQNSHTKTITFDEVYNQSSP---------TNCTVYCGGFGKDLNEELVSKVFSPF 230
N + S T+ Q SP N T++ GG + +E + VF F
Sbjct: 189 LNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQF 248
Query: 231 GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
G +V +++ KG FV+FT + A A++ +H T I V+ WG+ N T A P
Sbjct: 249 GELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQT-ADPG 307
Query: 291 APTTPQPN 298
PN
Sbjct: 308 WGQHQDPN 315
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V +E L +F Q G + K+ P F++F H A AL ++
Sbjct: 225 TTIFVGGLDPAVGDEDLRNVFGQFGELVYVKI---PAGKGCGFVQFTHRACAEEALQRLH 281
Query: 68 KRVFLEKEMKVNWASSPGNQPKQD 91
+ V + ++++W SPGN+ D
Sbjct: 282 QTVIGTQAVRLSWGRSPGNKQTAD 305
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 17/287 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G ++ K+IR+ Y F+EF H A L
Sbjct: 89 TLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAERVLQG 148
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 149 YNGHAMPNVDLAYRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSV 205
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + + E
Sbjct: 206 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQE 265
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R N++T+ D + P N T++ GG ++ E+ + +VF+P+G ++ +++ K
Sbjct: 266 RV-PNTNTQGAQSD-----NDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGK 319
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
FV+F + +A A++ + T I G V+ WG+ N AQP
Sbjct: 320 RCGFVQFVNRPSAEQALQMLQGTPIGGQNVRLSWGRSPSNKQ--AQP 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI------REPGNDPYAFLEFVH 55
D++ T++VG+L VT+ +L F P VKG KV+ R G Y F++F
Sbjct: 173 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKG---YGFVKFGD 229
Query: 56 HTVAATALAAMNKRVFLEKEMKVNWAS---------------SPGNQPKQDTSNHYHIFV 100
T A A+ MN + M++ A+ + G Q D N+ IFV
Sbjct: 230 PTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTNTQGAQSDND-PNNTTIFV 288
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G L P + LK+ FAP+GE+ + +I K FV FV + AE A+ + G
Sbjct: 289 GGLDPNVTEDALKQVFAPYGEVIHVKIP------VGKRCGFVQFVNRPSAEQALQMLQGT 342
Query: 161 WLGSRSIRTNWSTRKP 176
+G +++R +W R P
Sbjct: 343 PIGGQNVRLSWG-RSP 357
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE+ L +F+ G V K+ P F++FV+ A AL +
Sbjct: 284 TTIFVGGLDPNVTEDALKQVFAPYGEVIHVKI---PVGKRCGFVQFVNRPSAEQALQMLQ 340
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDTS 93
+ ++++W SP N QP+Q++S
Sbjct: 341 GTPIGGQNVRLSWGRSPSNKQAQPQQESS 369
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 15/287 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + + F+ G + K+IR+ Y F+EF H A L
Sbjct: 92 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 151
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ E+ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 152 FNGQMMPNVELAYRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSV 208
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + + E
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQE 268
Query: 183 R-KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
R N++T+ D + P N T++ GG ++ E+ + +VF+P+G +V +++
Sbjct: 269 RVPIPNTNTQGAQSD-----NDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVG 323
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K FV++ + +A A++ + T + G V+ WG+ N T Q
Sbjct: 324 KRCGFVQYANRPSAEQALQLLQGTLVGGQNVRLSWGRSPSNKQTQPQ 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ + + Y F++F T
Sbjct: 176 DDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 235
Query: 59 AATALAAMNKRVFLEKEMKVNWAS-----------------SPGNQPKQDTSNHYHIFVG 101
A A+ MN + M++ A+ + G Q D N+ IFVG
Sbjct: 236 QARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNTQGAQSDND-PNNTTIFVG 294
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
L P + LK+ FAP+GE+ + +I K FV + + AE A+ + G
Sbjct: 295 GLDPNVTEDALKQVFAPYGEVVHVKIP------VGKRCGFVQYANRPSAEQALQLLQGTL 348
Query: 162 LGSRSIRTNWSTRKP 176
+G +++R +W R P
Sbjct: 349 VGGQNVRLSWG-RSP 362
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE+ L +F+ G V K+ P F+++ + A AL +
Sbjct: 289 TTIFVGGLDPNVTEDALKQVFAPYGEVVHVKI---PVGKRCGFVQYANRPSAEQALQLLQ 345
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDT 92
+ + ++++W SP N QP++ T
Sbjct: 346 GTLVGGQNVRLSWGRSPSNKQTQPQEAT 373
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 159/339 (46%), Gaps = 27/339 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L + FSQ G V K+IR ++ Y F+EF H A L +
Sbjct: 139 TIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQS 198
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA + + +T + + IFVGDL+ ++ L++ FA + +
Sbjct: 199 YNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSL 258
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T SKGY FV F ++E A+T MNG + SR++R +T K P+
Sbjct: 259 KGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSA--- 315
Query: 183 RKRQNSHTKTITFDEVY-----------NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+Q ++ + Y + +N T++ GG D+ +E + + F+ FG
Sbjct: 316 --QQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFG 373
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
+V +++ KG FV+F+ + +A AI+ + I V+ WG+ N A +
Sbjct: 374 EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADSGS 433
Query: 292 PTTPQPNSTAPQFPYIY----NQQMGYWYPQAAAYTATA 326
N Y Y NQ G Y AAY A++
Sbjct: 434 QWNGGYNGRQNYGGYGYGASQNQDSGM-YATGAAYGASS 471
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q + + ++ I++GDL ++ L F+ GE+ + +I+R+ QT +S+ Y FV F
Sbjct: 129 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 188
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A AE + + NG + + R NW+ T E++ + +
Sbjct: 189 HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFS----TGEKRAE----------------TG 228
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATH 257
++ +++ G D+ + ++ F+ +VD KGY FV+F + +
Sbjct: 229 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 288
Query: 258 AIESIHNTDING 269
A+ T++NG
Sbjct: 289 AM-----TEMNG 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
++ TT++VG LD VT+E L F+Q G V K+ P F++F + A A+
Sbjct: 345 DASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKI---PAGKGCGFVQFSDRSSAQEAI 401
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ + ++ ++++W SP N Q + D+ + ++
Sbjct: 402 QKLSGAIIGKQAVRLSWGRSPANKQMRADSGSQWN 436
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ Y F+EF A L
Sbjct: 84 TLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQT 143
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + EM ++NWA++ K D Y IFVGDL+ ++ L+E F A + +
Sbjct: 144 FNGAMMPNVEMTYRLNWATA---GEKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSV 200
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R PA N+
Sbjct: 201 KGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIG------PA-ANK 253
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+K K T + + P+N T++ GG E+++ +VF+P+G +V +++ K
Sbjct: 254 QKANGVQEKVPTAQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGK 313
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ ++ +A A+ + T I G V+ WG+ N
Sbjct: 314 RCGFVQYASRSSAEEALLMLQGTMIEGQNVRLSWGRSPSN 353
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI------REPGNDPYAFLEFVH 55
D+ T++VG+L VT+ LL F +Q VKG KV+ R G Y F++F
Sbjct: 168 DDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKG---YGFVKFGD 224
Query: 56 HTVAATALAAMNKRVFLEKEMKVNWASSP--------------GNQPKQDTSNHYHIFVG 101
T A+ MN + + M++ A++ G Q D SN IFVG
Sbjct: 225 PTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPTAQGIQTDNDPSNS-TIFVG 283
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
L P LK+ F P+GE+ + +I K FV + ++ AE A+ + G
Sbjct: 284 GLDPSATEDVLKQVFTPYGEVVHVKIP------VGKRCGFVQYASRSSAEEALLMLQGTM 337
Query: 162 LGSRSIRTNWSTRKP 176
+ +++R +W R P
Sbjct: 338 IEGQNVRLSWG-RSP 351
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+T++VG LD S TE++L +F+ G V K+ P F+++ + A AL +
Sbjct: 278 STIFVGGLDPSATEDVLKQVFTPYGEVVHVKI---PVGKRCGFVQYASRSSAEEALLMLQ 334
Query: 68 KRVFLEKEMKVNWASSPGNQPKQD 91
+ + ++++W SP N+ QD
Sbjct: 335 GTMIEGQNVRLSWGRSPSNKQVQD 358
>gi|148666755|gb|EDK99171.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_e
[Mus musculus]
gi|149036618|gb|EDL91236.1| rCG56007, isoform CRA_b [Rattus norvegicus]
Length = 122
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 2/122 (1%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAAT 61
++ P TLYVGNL VTE L+ LFSQIGP K CK+I + GNDPY F+EF H AA
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
ALAAMN R + KE+KVNWA++P +Q K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQ-KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR 120
Query: 122 IS 123
IS
Sbjct: 121 IS 122
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS ++ + + F+ G NC+++ D T + Y FV F + A A+ AM
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+T ++++K ++H V+ G +
Sbjct: 67 NGRKIMGKEVKVNWATTP----SSQKKDTSNHFH-----------------VFVGDLSPE 105
Query: 218 LNEELVSKVFSPFGTI 233
+ E + F+PFG I
Sbjct: 106 ITTEDIKAAFAPFGRI 121
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 14/290 (4%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATA 62
+ T++VG+L + E L FS G V K+IR + Y F+EF H A
Sbjct: 78 EAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKV 137
Query: 63 LAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PF 119
L + + + ++ ++NWAS G + + D + IFVGDL+ ++ L+E FA +
Sbjct: 138 LQSYSGSMMPNTDQPFRLNWASFAGER-RADAGSDLSIFVGDLAADVTDAMLQETFATKY 196
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPA 178
+ ++V D T +SKGY FV F + E AIT MNG + SR +R +T +KP A
Sbjct: 197 ASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPKKPSA 256
Query: 179 MTNERKRQ-----NSHTKTITFDE-VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ Q H T + + N T++ GG D+ +E + + FS FG
Sbjct: 257 YQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQFGE 316
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+V +++ KG AFV+F ++ A A++S++ T I TV+ WG+ N
Sbjct: 317 VVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPAN 366
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG +D VT+E L FSQ G V K+ P AF++F + A AL
Sbjct: 287 DSNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKM---PTGKGCAFVQFANRKNAEDAL 343
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++N ++ ++++W +P N Q + D N +H
Sbjct: 344 QSLNGTTIGKQTVRLSWGRTPANKQWRGDHGNQWH 378
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 17/290 (5%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAAT 61
S+ TL++G+L + + + F+ G V+ K+IR+ Y F+EF+ A
Sbjct: 108 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 167
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-AP 118
L N + +E ++NWAS+ K+D + Y IFVGDL+ ++ L+E F A
Sbjct: 168 VLQTYNGTMMPNVELPFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYVLQETFRAH 224
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+ + ++V D T+++KGY FV F E A+T MNG SR +R + K
Sbjct: 225 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKAT 284
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ E K + V + + P N T++ GG ++ E+++ +VF+P+G +V +++
Sbjct: 285 VVQE--------KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKI 336
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K FV++ + +A A+ + T + G V+ WG+ N Q
Sbjct: 337 PVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQ 386
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ + Y F++F
Sbjct: 196 DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNE 255
Query: 59 AATALAAMNKRVFLEKEMKVNWA-------------SSPGNQPKQDTSNHYHIFVGDLSP 105
A A+ MN + + M++ A S+ G Q D +N IFVG L P
Sbjct: 256 QARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNT-TIFVGGLDP 314
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ LK+ F P+G++ + +I K FV + ++ AE A+ + G +G +
Sbjct: 315 NVTEDMLKQVFTPYGDVVHVKIP------VGKRCGFVQYANRSSAEEALVILQGTLVGGQ 368
Query: 166 SIRTNWSTRKPPAMTNERKRQNSH 189
++R +W + P+ + +Q+S+
Sbjct: 369 NVRLSWG--RSPSNKQVQPQQDSN 390
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 17/290 (5%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAAT 61
S+ TL++G+L + + + F+ G V+ K+IR+ Y F+EF+ A
Sbjct: 118 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 177
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-AP 118
L N + +E ++NWAS+ K+D + Y IFVGDL+ ++ L+E F A
Sbjct: 178 VLQTYNGTMMPNVELPFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYVLQETFRAH 234
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+ + ++V D T+++KGY FV F E A+T MNG SR +R + K
Sbjct: 235 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKAT 294
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ E K + V + + P N T++ GG ++ E+++ +VF+P+G +V +++
Sbjct: 295 VVQE--------KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKI 346
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K FV++ + +A A+ + T + G V+ WG+ N Q
Sbjct: 347 PVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQ 396
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI------REPGNDPYAFLEFVH 55
D++ T++VG+L VT+ +L F P VKG KV+ R G Y F++F
Sbjct: 206 DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKG---YGFVKFGD 262
Query: 56 HTVAATALAAMNKRVFLEKEMKVNWA-------------SSPGNQPKQDTSNHYHIFVGD 102
A A+ MN + + M++ A S+ G Q D +N IFVG
Sbjct: 263 PNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNT-TIFVGG 321
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L P + LK+ F P+G++ + +I K FV + ++ AE A+ + G +
Sbjct: 322 LDPNVTEDMLKQVFTPYGDVVHVKIP------VGKRCGFVQYANRSSAEEALVILQGTLV 375
Query: 163 GSRSIRTNWSTRKPPAMTNERKRQNSH 189
G +++R +W + P+ + +Q+S+
Sbjct: 376 GGQNVRLSWG--RSPSNKQVQPQQDSN 400
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 17/284 (5%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAAT 61
S+ TL++G+L + + + F+ G V+ K+IR+ Y F+EF+ A
Sbjct: 118 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 177
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-AP 118
L N + +E ++NWAS+ K+D + Y IFVGDL+ ++ L+E F A
Sbjct: 178 VLQTYNGTMMPNVELPFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYVLQETFRAH 234
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+ + ++V D T+++KGY FV F E A+T MNG SR +R + K
Sbjct: 235 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKAT 294
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ E K + V + + P N T++ GG ++ E+++ +VF+P+G +V +++
Sbjct: 295 VVQE--------KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKI 346
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
K FV++ + +A A+ + T + G V+ WG+ N
Sbjct: 347 PVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSN 390
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ + Y F++F
Sbjct: 206 DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNE 265
Query: 59 AATALAAMNKRVFLEKEMKVNWA-------------SSPGNQPKQDTSNHYHIFVGDLSP 105
A A+ MN + + M++ A S+ G Q D +N IFVG L P
Sbjct: 266 QARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNT-TIFVGGLDP 324
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ LK+ F P+G++ + +I K FV + ++ AE A+ + G +G +
Sbjct: 325 NVTEDMLKQVFTPYGDVVHVKIP------VGKRCGFVQYANRSSAEEALVILQGTLVGGQ 378
Query: 166 SIRTNWSTRKP 176
++R +W R P
Sbjct: 379 NVRLSWG-RSP 388
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 77/98 (78%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
SS + K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG+IS+ R+V+D T KSKGY
Sbjct: 1 GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYG 60
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 61 FVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA 98
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESI 262
V+ G ++ E + F+PFG I D RV K+ KGY FV F K A +AI +
Sbjct: 18 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 77
Query: 263 HNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
+ G ++ W +P AP+ P
Sbjct: 78 GGQWLGGRQIRTNWATR--------KPPAPSGP 102
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 13/288 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L +FS G V KVIR + Y F+EF++ A L
Sbjct: 67 SLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERILQT 126
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N E+ ++NWA+ + +QD Y +FVGDL+P++ L+E F + +
Sbjct: 127 YNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYPSV 186
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F + E A+ MNGQ+ +R++R + K PA+
Sbjct: 187 KGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQQY 246
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+K T+ ++ P N T++ G +++E + +VF +G +V +++ K
Sbjct: 247 QKAPYQSTQGTQ-----GENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGK 301
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
FV+F + A A+ ++ T + G +++ WG+ N AQP
Sbjct: 302 RCGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQ--AQPD 347
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L + F+ G V+ K+IR + Y F+EFV H A L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + + IFVGDL+P++ L+E F + +
Sbjct: 76 YNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYPSV 135
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P +
Sbjct: 136 RGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAI---PKKSTG 192
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q S K + V S PTN T++ G ++ E+ + ++ FG +
Sbjct: 193 SQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQFGEL 252
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ KG FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 253 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGR 297
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +VTE+ L + Q G + K+ P F+++ A A+ ++
Sbjct: 226 TTIFIGNLDPNVTEDELRQICVQFGELIYVKI---PVGKGCGFVQYASRASAEEAVQRLH 282
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
+ ++ ++++W SP + KQD S
Sbjct: 283 GTMIGQQAVRLSWGRSPAS--KQDPS 306
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L + F+ G V+ K+IR + Y F+EFV H A L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + + IFVGDL+P++ L+E F + +
Sbjct: 76 YNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSV 135
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P +
Sbjct: 136 RGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAI---PKKSTG 192
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q S K + V S PTN T++ G ++ E+ + ++ FG +
Sbjct: 193 SQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQFGEL 252
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ KG FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 253 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGR 297
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +V E+ L + Q G + K+ P F+++ A A+ ++
Sbjct: 226 TTIFIGNLDPNVIEDELRQICVQFGELIYVKI---PVGKGCGFVQYASRASAEEAVQRLH 282
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
+ ++ ++++W SP + KQD+S
Sbjct: 283 GTMIGQQAVRLSWGRSPAS--KQDSS 306
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L + F+ G V+ K+IR + Y F+EFV H A L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + + IFVGDL+P++ L+E F + +
Sbjct: 76 YNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSV 135
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P +
Sbjct: 136 RGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAI---PKKSTG 192
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q S K + V S PTN T++ G ++ E+ + ++ FG +
Sbjct: 193 SQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQFGEL 252
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ KG FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 253 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGR 297
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +V E+ L + Q G + K+ P F+++ A A+ ++
Sbjct: 226 TTIFIGNLDPNVIEDELRQICVQFGELIYVKI---PVGKGCGFVQYASRASAEEAVQRLH 282
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
+ ++ ++++W SP + KQD+S
Sbjct: 283 GTMIGQQAVRLSWGRSPAS--KQDSS 306
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L A
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F A + +
Sbjct: 102 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSV 161
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T ++KGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 162 RGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT--PKKTTGF 219
Query: 183 RKRQNSHTKTITFDEVYN----QSSPT-----NCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+++ + K + Y Q+ P N T++ G ++ EE + ++FS FG +
Sbjct: 220 QQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGEL 279
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
V +++ +G FV+F T+ +A AI+ + T I V+ WG+
Sbjct: 280 VYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGR 324
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L A
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F A + +
Sbjct: 102 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSV 161
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T ++KGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 162 RGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT--PKKTTGF 219
Query: 183 RKRQNSHTKTITFDEVYN----QSSPT-----NCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+++ + K + Y Q+ P N T++ G ++ EE + ++FS FG +
Sbjct: 220 QQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGEL 279
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
V +++ +G FV+F T+ +A AI+ + T I V+ WG+
Sbjct: 280 VYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGR 324
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR + Y F+EF H A L
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 122
Query: 66 MNKR---VFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N F ++ ++NWAS S G+ K+D S Y IFVGDL+ ++ L E F A +
Sbjct: 123 FNNAPIPSFPDQLFRLNWASLSSGD--KRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T ++KGY FV F ++E A+T MNG +R +R + K +T
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK-GVT 239
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+R S +T D + P N TV+ GG + ++ + VFS +G IV +++
Sbjct: 240 GQRDSYQSSAAGVTTD-----NDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA 294
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
K FV+F+ K A A+ ++ + G TV+ WG+ N +
Sbjct: 295 GKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQS 339
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 150 DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESE 209
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHIFVGDLS 104
A+ MN + M++ A+S Q S N+ +FVG L
Sbjct: 210 QIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLD 269
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ LK F+ +GEI + +I K FV F +K+ AE A+ +NG LG
Sbjct: 270 ASVTDDHLKNVFSQYGEIVHVKIP------AGKRCGFVQFSEKSCAEEALRMLNGVQLGG 323
Query: 165 RSIRTNWSTRKP 176
++R +W R P
Sbjct: 324 TTVRLSWG-RSP 334
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT++ L +FSQ G + K+ P F++F + A AL +N
Sbjct: 261 TTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI---PAGKRCGFVQFSEKSCAEEALRMLN 317
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++++W SP N+ D S Y+
Sbjct: 318 GVQLGGTTVRLSWGRSPSNKQSGDPSQFYY 347
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L A
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F A + +
Sbjct: 102 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSV 161
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T ++KGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 162 RGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT--PKKTTGF 219
Query: 183 RKRQNSHTKTITFDEVYN----QSSPT-----NCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+++ + K + Y Q+ P N T++ G ++ EE + ++FS FG +
Sbjct: 220 QQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGEL 279
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
V +++ +G FV+F T+ +A AI+ + T I V+ WG+
Sbjct: 280 VYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGR 324
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L F+ G ++ K+IR + Y F+EF+ H VA L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 77 YNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSV 136
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P T
Sbjct: 137 KGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAI---PKKTTG 193
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q K + V S PTN T++ G +++ E+ + ++ FG +
Sbjct: 194 SQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGEL 253
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ K FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 254 IYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGR 298
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +VTE+ L + Q G + K+ P N F+++ A A+ ++
Sbjct: 227 TTIFIGNLDQNVTEDELRQICVQFGELIYVKI---PANKACGFVQYASRASAEEAVQRLH 283
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
++ ++++W SP + KQD S
Sbjct: 284 GTTIGQQVVRLSWGRSPAS--KQDQS 307
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L F+ G ++ K+IR + Y F+EF+ H VA L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 77 YNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSV 136
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P T
Sbjct: 137 KGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAI---PKKTTG 193
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q K + V S PTN T++ G +++ E+ + ++ FG +
Sbjct: 194 SQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGEL 253
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ K FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 254 IYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGR 298
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +VTE+ L + Q G + K+ P N F+++ A A+ ++
Sbjct: 227 TTIFIGNLDQNVTEDELRQICVQFGELIYVKI---PANKACGFVQYASRASAEEAVQRLH 283
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
++ ++++W SP + KQD S
Sbjct: 284 GTTIGQQVVRLSWGRSPAS--KQDQS 307
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 76/98 (77%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
SS + K+DTSNH+H+FVGDLSPEI T+ +K AFAPFG IS+ R+V+D T KSKGY
Sbjct: 1 GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 60
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
FVSF K +AENAI M GQWLG R IRTNW+TRKPPA
Sbjct: 61 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 98
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESI 262
V+ G ++ E + F+PFG I D RV K+ KGY FV F K A +AI+ +
Sbjct: 18 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 77
Query: 263 HNTDINGHTVKCFW 276
+ G ++ W
Sbjct: 78 GGQWLGGRQIRTNW 91
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
D S ++VG+L +T E + A F+ G + +V+++ + Y F+ F + A
Sbjct: 11 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 70
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPK 89
A+ M + ++++ NWA+ PK
Sbjct: 71 ENAIQQMGGQWLGGRQIRTNWATRKPPAPK 100
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L F+ G ++ K+IR + Y F+EF+ H VA L
Sbjct: 39 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 98
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 99 YNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSV 158
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + + P T
Sbjct: 159 KGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAI---PKKTTG 215
Query: 183 RKRQNSHTKTI---------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q K + V S PTN T++ G +++ E+ + ++ FG +
Sbjct: 216 SQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGEL 275
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +++ K FV++ ++ +A A++ +H T I V+ WG+
Sbjct: 276 IYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGR 320
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +VTE+ L + Q G + K+ P N F+++ A A+ ++
Sbjct: 249 TTIFIGNLDQNVTEDELRQICVQFGELIYVKI---PANKACGFVQYASRASAEEAVQRLH 305
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
++ ++++W SP + KQD S
Sbjct: 306 GTTIGQQVVRLSWGRSPAS--KQDQS 329
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 7/285 (2%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAAT 61
S+ T++VG+L + E L + F+ G + KVIR ++ Y F+EF HT A
Sbjct: 89 SENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEK 148
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP- 118
L + + E+ ++NWA+ + + + IFVGDL+ ++ L E FA
Sbjct: 149 VLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSVLHETFASK 208
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+ + ++V DP T SKGY FV F E A+T MNG + SR +R +T K +
Sbjct: 209 YSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSS 268
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
++ + +F + TN T++ GG ++ +E + ++FS G IV ++
Sbjct: 269 GYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVK 328
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ KG F++F ++ A A++ ++ T I TV+ WG+ N
Sbjct: 329 IPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTN 373
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
TS + I+VGDL ++ L FA GEIS+ +++R+ QT S+GY FV F AE
Sbjct: 88 TSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAE 147
Query: 152 NAITAMNGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
+ + + + ++ R NW+T T +++ +N ++ ++
Sbjct: 148 KVLQNYSSILMPNTEQAFRLNWATFS----TGDKRSENG----------------SDLSI 187
Query: 210 YCGGFGKDLNEELVSKVF-SPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESI 262
+ G D+ + ++ + F S + ++ +V + KGY FV+F + A+
Sbjct: 188 FVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAM--- 244
Query: 263 HNTDING 269
T++NG
Sbjct: 245 --TEMNG 249
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++G LD +VT+E L LFSQ G + K+ P F++F + A AL +N
Sbjct: 298 TTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKI---PVGKGCGFIQFANRKNAEEALQKLN 354
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
V ++ ++++W SP N Q + D NH+
Sbjct: 355 GTVIGKQTVRLSWGRSPTNKQYRGDYGNHW 384
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L + F+ V+ KVIR ++ Y F+EF +H+ A L +
Sbjct: 22 TLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNHSTAEKVLQS 81
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWA + + D + IFVGDL+P++ L+E F + + +
Sbjct: 82 FNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGDLAPDVTDYMLQETFQSRYSSV 141
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F +AE A+T M G + +R +R + +T +K A
Sbjct: 142 KGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVYCSTRPMRISTATPKKSLATIP 201
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ QN +T + P+N TV+ GG + +E + +VFS FG I +++
Sbjct: 202 PKGFQNFGVPPLT------DNDPSNTTVFVGGLDHSVKDEDLKQVFSQFGDIQYVKIPAG 255
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
K FV+F T+ +A A++ +H + I T++ WG+ N
Sbjct: 256 KNCGFVQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSPAN 296
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SV +E L +FSQ G ++ K+ P F++F A AL ++
Sbjct: 221 TTVFVGGLDHSVKDEDLKQVFSQFGDIQYVKI---PAGKNCGFVQFYTRASAEEALQKLH 277
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
++ ++++W SP N+
Sbjct: 278 GSTIGQQTIRLSWGRSPANK 297
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 17/290 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR + Y F+EF H A L
Sbjct: 65 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 124
Query: 66 MNKR---VFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N F ++ ++NWAS S G+ K+D S Y IFVGDL+ ++ L E F A +
Sbjct: 125 FNNAPIPSFPDQLFRLNWASLSSGD--KRDDSPDYTIFVGDLAADVTDYILLETFRASYP 182
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T ++KGY FV F ++E A+T MNG +R +R + K +T
Sbjct: 183 SVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK-GVT 241
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+R S + D + P N TV+ GG + + ++ + VF +G IV +++
Sbjct: 242 GQRDSYQSAAGGVPTD-----NDPNNTTVFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPA 296
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F+ K A A+ ++ + G TV+ WG+ S +N A PS
Sbjct: 297 GKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGR-SPSNKQSADPS 345
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGN-DPYAFLEFVHHTV 58
D+S T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 152 DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESE 211
Query: 59 AATALAAMNKRVFLEKEMKV--------------NWASSPGNQPKQDTSNHYHIFVGDLS 104
A+ MN + M++ ++ S+ G P + N+ +FVG L
Sbjct: 212 QIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVPTDNDPNNTTVFVGGLD 271
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ LK F +GEI + +I K FV F +K+ AE A+ +NG LG
Sbjct: 272 QSVTDDHLKNVFGQYGEIVHVKIP------AGKRCGFVQFSEKSCAEEALRMLNGVQLGG 325
Query: 165 RSIRTNWSTRKP 176
++R +W R P
Sbjct: 326 TTVRLSWG-RSP 336
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT++ L +F Q G + K+ P F++F + A AL +N
Sbjct: 263 TTVFVGGLDQSVTDDHLKNVFGQYGEIVHVKI---PAGKRCGFVQFSEKSCAEEALRMLN 319
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++++W SP N+ D S Y+
Sbjct: 320 GVQLGGTTVRLSWGRSPSNKQSADPSQFYY 349
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 27/339 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L + FSQ G V K+IR ++ Y F+EF H A L +
Sbjct: 85 TIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQS 144
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA + + +T + + IFVGDL+ ++ L++ FA + +
Sbjct: 145 YNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSL 204
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T SKGY FV F ++E A+T MNG + SR++R +T K P+ +
Sbjct: 205 KGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ 264
Query: 183 RKRQNSHTKTITFDEVY-----------NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
Q + Y + +N T++ GG ++ +E + + F+ FG
Sbjct: 265 YSSQ-----AVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFG 319
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
+V +++ KG FV+F+ + +A AI+ + I V+ WG+ N +
Sbjct: 320 EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGS 379
Query: 292 PTTPQPNSTAPQFPYIY----NQQMGYWYPQAAAYTATA 326
N Y Y NQ G Y AAY A++
Sbjct: 380 QWNGGYNGRQNYGGYGYGASQNQDSGM-YATGAAYGASS 417
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q + + ++ I++GDL ++ L F+ GE+ + +I+R+ QT +S+ Y FV F
Sbjct: 75 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A AE + + NG + + R NW+ T E++ + +
Sbjct: 135 HAAAEKVLQSYNGTMMPNTEQPFRLNWAGFS----TGEKRAE----------------TG 174
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATH 257
++ +++ G D+ + ++ F+ +VD KGY FV+F + +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 258 AIESIHNTDING 269
A+ T++NG
Sbjct: 235 AM-----TEMNG 241
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD VT+E L F+Q G V K+ P F++F + A A+
Sbjct: 291 DSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKI---PAGKGCGFVQFSDRSSAQEAI 347
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ + ++ ++++W SP N Q + D+ + ++
Sbjct: 348 QKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWN 382
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 108/180 (60%), Gaps = 5/180 (2%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIG-PVKGCKVIREPGND--PYAFLEFVHHTVAATALA 64
T LYVGNL S +EE++ LFS G P+K K++ + YAF+E+ + A AL
Sbjct: 82 TILYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALN 141
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH--YHIFVGDLSPEIETQTLKEAFAPFGEI 122
+N RV E E+KVNWA S ++IFVGDLSPE+ + L+ AF+ FG +
Sbjct: 142 TLNGRVIDESEIKVNWAYQSAAIASTLNSEEPLFNIFVGDLSPEVNDEGLRNAFSKFGSL 201
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++ D QT +S+GY FV+F ++A+AE A+ MNG+WLG R+IR NW++ K N+
Sbjct: 202 KQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGRAIRCNWASHKQQQYNNQ 261
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 26/186 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGE-ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
++VG+L + +K+ F+ G I +++ D + YAF+ + A+ A+
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLND-KNKAGFNYAFIEYDSNDTADMALNT 142
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
+NG+ + I+ NW+ ++ N P ++ G
Sbjct: 143 LNGRVIDESEIKVNWAY-----------------QSAAIASTLNSEEPL-FNIFVGDLSP 184
Query: 217 DLNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
++N+E + FS FG++ D++ + +GY FV F+ + A A+++++ + G
Sbjct: 185 EVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGR 244
Query: 271 TVKCFW 276
++C W
Sbjct: 245 AIRCNW 250
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
+FD V Q+ TVY G ++ + + FG IVD + E+G AFVK+ T E
Sbjct: 363 SFDIVLRQTPSWQTTVYLGNIAHFTQQQEIIPLLQNFGFIVDFKFHPERGCAFVKYDTHE 422
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ++NG +KC WGKE
Sbjct: 423 RAALAIIQLAGFNLNGRPLKCGWGKE 448
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPT-------NCTVYCGGFGKDLNEELVSKVFSP 229
P +E+ Q S T T + +S T N +Y G K +EE+V +FS
Sbjct: 45 PNQDDEQAEQQSSTSTPPEESSLTPASATEGGREISNTILYVGNLPKSASEEMVKDLFSV 104
Query: 230 FGT-IVDIRVFKEK-----GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
G I I++ +K YAF+++ + +TA A+ +++ I+ +K W +S
Sbjct: 105 GGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTLNGRVIDESEIKVNWAYQS 161
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 22/287 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L + FSQ G V K+IR ++ Y F+EF H A L +
Sbjct: 85 TIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQS 144
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA + + +T + + IFVGDL+ ++ L++ FA + +
Sbjct: 145 YNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSL 204
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T SKGY FV F ++E A+T MNG + SR++R +T K P+
Sbjct: 205 KGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPS---- 260
Query: 183 RKRQNSHTKTITFDEVY-----------NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+Q ++ + Y + +N T++ GG D+ +E + + F+ FG
Sbjct: 261 -AQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFG 319
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F+ + +A AI+ + I V+ WG+
Sbjct: 320 EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGR 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q + + ++ I++GDL ++ L F+ GE+ + +I+R+ QT +S+ Y FV F
Sbjct: 75 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A AE + + NG + + R NW+ T E++ + +
Sbjct: 135 HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFS----TGEKRAE----------------TG 174
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATH 257
++ +++ G D+ + ++ F+ +VD KGY FV+F + +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 258 AIESIHNTDING 269
A+ T++NG
Sbjct: 235 AM-----TEMNG 241
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
++ TT++VG LD VT+E L F+Q G V K+ P F++F + A A+
Sbjct: 291 DASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKI---PAGKGCGFVQFSDRSSAQEAI 347
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++ + ++ ++++W + Q + D+ + ++
Sbjct: 348 QKLSGAIIGKQAVRLSWGRTANKQMRADSGSQWN 381
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 10/289 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G V KVIR ++ Y F+EF A L
Sbjct: 68 TLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 127
Query: 66 MNKRVFLE--KEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGE 121
N + + ++NWA+ S G + +QD S Y IFVGDL+ ++ L+E F A +
Sbjct: 128 YNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDYTIFVGDLAADVTDYLLQETFRARYNS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T ++KGY FV F +++E A+T M G +R +R ++ K PA +
Sbjct: 188 VKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMTEMQGVLCSTRPMRIGPASNKTPATQS 247
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ K +++ N++ P N T++ G ++ ++ + +VFS +G +V +++
Sbjct: 248 QPKASYLNSQP---QGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAG 304
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F + A A+ ++ T + G V+ WG+ N A P+
Sbjct: 305 KRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQADPN 353
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ LL F ++ VKG KV+ R G Y F+ F +
Sbjct: 156 DDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESE 215
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPG----NQPK-------------QDTSNHYHIFVG 101
A+ M + + M++ AS+ +QPK ++ N+ IFVG
Sbjct: 216 QMRAMTEMQGVLCSTRPMRIGPASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVG 275
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
+L P + L++ F+ +GE+ + +I K FV F ++ AE A+ +NG
Sbjct: 276 NLDPNVTDDHLRQVFSQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTL 329
Query: 162 LGSRSIRTNWSTRKP 176
LG +++R +W R P
Sbjct: 330 LGGQNVRLSWG-RSP 343
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VT++ L +FSQ G + K+ P F++F + A AL +N
Sbjct: 270 TTIFVGNLDPNVTDDHLRQVFSQYGELVHVKI---PAGKRCGFVQFADRSCAEEALRVLN 326
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ + ++++W SP N+ Q N ++
Sbjct: 327 GTLLGGQNVRLSWGRSPSNKQAQADPNQWN 356
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L LF+ G V KVIR + Y F+EF H A L A
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D IFVGDL+P++ L E F F +
Sbjct: 89 YNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSV 148
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A++ MNG + SR +R + +T K
Sbjct: 149 RGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPK------- 201
Query: 183 RKRQNSHTKTITFDEVYNQ-----------------------SSPTNCTVYCGGFGKDLN 219
K + T+T + Q S PTN T++ GG ++
Sbjct: 202 -KAMAAGLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNIT 260
Query: 220 EELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
EE V + FS G +V +++ KG AFV++ + +A A++ +H T I ++ WG+
Sbjct: 261 EEEVKQTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGR- 319
Query: 280 SENNSTLAQPSAPTTPQPNSTAPQF 304
S + APT+P ++ Q+
Sbjct: 320 ----SPTSTKQAPTSPWRDAAQTQW 340
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD+++TEE + FS IG + K+ P AF+++ A AL ++
Sbjct: 248 TTIFVGGLDLNITEEEVKQTFSHIGELVSVKI---PPGKGCAFVQYAQRNSAEDALQRLH 304
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
V ++ ++++W SP + + TS
Sbjct: 305 GTVIGQQAIRLSWGRSPTSTKQAPTS 330
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 15/300 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L FS G + K+IR ++ Y F+EF+ T A +
Sbjct: 93 TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIMQT 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + E+ ++NWA+ + + D + IFVGDL ++ L+E F + + +
Sbjct: 153 YNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYSSV 212
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F +++E A+T MNG + +R +R + +T RK + +
Sbjct: 213 KAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAGVQH 272
Query: 182 E---RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ R SH + D N N T++ G + +E + +VF +G +V +++
Sbjct: 273 QYSGRGNGGSHAQGFPSDNDLN-----NTTIFVGRLDPNATDEDLRQVFGQYGELVSVKI 327
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPN 298
KG FV+F + +A A++ +H T I TV+ WG+ N PN
Sbjct: 328 PVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQGQQPQSDPN 387
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD + T+E L +F Q G + K+ P F++F + A AL ++
Sbjct: 296 TTIFVGRLDPNATDEDLRQVFGQYGELVSVKI---PVGKGCGFVQFGNRASAEEALQRLH 352
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
V ++ ++++W SP N+
Sbjct: 353 GTVIRQQTVRLSWGRSPANK 372
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ + Y F+EF A L
Sbjct: 92 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 151
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ EM ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 152 YNGQMMPNVEMVFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 208
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + K E
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 268
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R ++ ++ P N T++ GG ++ E+++ +VF+P+G +V +++ K
Sbjct: 269 RVPNAQGAQS--------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 320
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ + +A A+ + T I G V+ WG+ N
Sbjct: 321 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSN 360
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + + Y F++F T
Sbjct: 176 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 235
Query: 59 AATALAAMNKRVFLEKEMKVNWASS----------PGNQPKQ--DTSNHYHIFVGDLSPE 106
A A+ MN + + M++ A++ P Q Q + N+ IFVG L P
Sbjct: 236 QARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPNAQGAQSENDPNNTTIFVGGLDPN 295
Query: 107 IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRS 166
+ LK+ FAP+GE+ + +I K FV +V + AE A+ + G +G ++
Sbjct: 296 VTEDVLKQVFAPYGEVVHVKIP------VGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 349
Query: 167 IRTNWSTRKPPAMTNERKRQNSH 189
+R +W +++N++ + +S+
Sbjct: 350 VRLSWGR----SLSNKQPQHDSN 368
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L +F+ G V K+ P F+++V+ A ALA +
Sbjct: 285 TTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKI---PVGKRCGFVQYVNRPSAEQALAVLQ 341
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ + ++++W S N+ Q SN +
Sbjct: 342 GTLIGGQNVRLSWGRSLSNKQPQHDSNQW 370
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ + Y F+EF A L
Sbjct: 91 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 150
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ EM ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 151 YNGQMMPNVEMVFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 207
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + K E
Sbjct: 208 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 267
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R ++ ++ P N T++ GG ++ E+++ +VF+P+G +V +++ K
Sbjct: 268 RVPNAQGAQS--------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 319
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ + +A A+ + T I G V+ WG+ N
Sbjct: 320 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSN 359
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + + Y F++F T
Sbjct: 175 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 234
Query: 59 AATALAAMNKRVFLEKEMKVNWASS----------PGNQPKQ--DTSNHYHIFVGDLSPE 106
A A+ MN + + M++ A++ P Q Q + N+ IFVG L P
Sbjct: 235 QARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPNAQGAQSENDPNNTTIFVGGLDPN 294
Query: 107 IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRS 166
+ LK+ FAP+GE+ + +I K FV +V + AE A+ + G +G ++
Sbjct: 295 VTEDVLKQVFAPYGEVVHVKIP------VGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 348
Query: 167 IRTNWSTRKPPAMTNERKRQNSH 189
+R +W +++N++ + +S+
Sbjct: 349 VRLSWGR----SLSNKQPQHDSN 367
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L +F+ G V K+ P F+++V+ A ALA +
Sbjct: 284 TTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKI---PVGKRCGFVQYVNRPSAEQALAVLQ 340
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ + ++++W S N+ Q SN +
Sbjct: 341 GTLIGGQNVRLSWGRSLSNKQPQHDSNQW 369
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ + Y F+EF A L
Sbjct: 80 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 139
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ EM ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 140 YNGQMMPNVEMVFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 196
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + K E
Sbjct: 197 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 256
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R ++ ++ P N T++ GG ++ E+++ +VF+P+G +V +++ K
Sbjct: 257 RVPNAQGAQS--------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 308
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ + +A A+ + T I G V+ WG+ N
Sbjct: 309 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSN 348
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + + Y F++F T
Sbjct: 164 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 223
Query: 59 AATALAAMNKRVFLEKEMKVNWASS----------PGNQPKQ--DTSNHYHIFVGDLSPE 106
A A+ MN + + M++ A++ P Q Q + N+ IFVG L P
Sbjct: 224 QARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPNAQGAQSENDPNNTTIFVGGLDPN 283
Query: 107 IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRS 166
+ LK+ FAP+GE+ + +I K FV +V + AE A+ + G +G ++
Sbjct: 284 VTEDVLKQVFAPYGEVVHVKIP------VGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 337
Query: 167 IRTNWSTRKPPAMTNERKRQNSH 189
+R +W +++N++ + +S+
Sbjct: 338 VRLSWGR----SLSNKQPQHDSN 356
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L +F+ G V K+ P F+++V+ A ALA +
Sbjct: 273 TTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKI---PVGKRCGFVQYVNRPSAEQALAVLQ 329
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ + ++++W S N+ Q SN +
Sbjct: 330 GTLIGGQNVRLSWGRSLSNKQPQHDSNQW 358
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 22/325 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L F+ G V+ K+IR + + Y F+EF+ H A L A
Sbjct: 18 TLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVLQA 77
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 78 YNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYSSV 137
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A++ MNG + +R +R + + P ++
Sbjct: 138 RGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAI---PKKSSG 194
Query: 183 RKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q K + Y S TN T++ G ++ EE + ++ FG +
Sbjct: 195 SQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQICVQFGEL 254
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
+ +++ KG FV++ ++ +A A++ +H T I V+ WG+ N +
Sbjct: 255 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQSAAWGQQ 314
Query: 294 TPQPNSTAPQFPYIYNQQMGYWYPQ 318
PN + + Y Y+ Y YPQ
Sbjct: 315 A-DPNQWSAYYSYGYDP---YGYPQ 335
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD +VTEE L + Q G + K+ P F+++ A A+ ++
Sbjct: 228 TTIFIGNLDPNVTEEELRQICVQFGELIYVKI---PVGKGCGFVQYASRASAEEAVQRLH 284
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
V ++ ++++W SP N KQD S
Sbjct: 285 GTVIGQQVVRLSWGRSPAN--KQDQS 308
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 17/284 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F A + +
Sbjct: 81 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSV 140
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A++ MNG + +R +R + +T P T
Sbjct: 141 RGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT---PKKTIG 197
Query: 183 RKRQNSHTKTITFDEVYNQSSPT--------NCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
++Q S K + Y S P N T++ G ++ EE + + F FG I
Sbjct: 198 VQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIA 257
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+++ KG FV+F T+ +A AI+ + I V+ WG+
Sbjct: 258 YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 301
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
++ TT++VGNLD ++TEE L F Q G + K+ P F++F A A+
Sbjct: 226 DANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKI---PAGKGCGFVQFGTRASAEEAI 282
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
M ++ ++ ++ +W +P KQD +
Sbjct: 283 QKMQGKIIGQQVVRTSWGRNPA--AKQDLT 310
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 22/291 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L + FS G V K+IR ++ Y F+EF H A L +
Sbjct: 34 TIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQS 93
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA+ + + +T + + IFVGDL+ ++ L++ FA F +
Sbjct: 94 YNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPSV 153
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T SKGY FV F ++E A+T MNG + SR +R +T K P+
Sbjct: 154 KGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPS---- 209
Query: 183 RKRQNSHTKTITFDEVY-----------NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+Q ++ + Y + +N T++ GG D+ +E + + F+ FG
Sbjct: 210 -AQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFG 268
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+V +++ KG FV+F+ + +A AI+ + I V+ WG+ N
Sbjct: 269 EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPAN 319
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD VT+E L F+Q G V K+ P F++F + A A+
Sbjct: 240 DSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKI---PAGKGCGFVQFSDRSSAQEAI 296
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSN 94
++ + ++ ++++W SP N Q + D+ N
Sbjct: 297 QKLSGAIIGKQAVRLSWGRSPANKQMRTDSGN 328
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAAT 61
S+ T++VG+L + E L + FS +G + KVIR ++ Y F+EF+ HT A
Sbjct: 81 SENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEK 140
Query: 62 ALAAMNKRVFL---EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
L + +F+ E+ ++NWA+ + D IFVGDL+ ++ L E F+
Sbjct: 141 VLQNYSG-MFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSS 199
Query: 119 -FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKP 176
F + ++V D T +SKGY FV F E A+T MNG + SR +R +T RK
Sbjct: 200 KFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPRKS 259
Query: 177 PAMTNERKRQNSHTKTITF--DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
+ Q T + + ++ N T++ GG ++ +E + + FS +G IV
Sbjct: 260 SGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIV 319
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+++ KG FV+F + A A++ ++ T I TV+ WG+ N
Sbjct: 320 SVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWGRNPAN 367
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPG---NDPYAFLEFVHHT 57
D +++VG+L VT+ LL FS P VK KV+ + + Y F+ F
Sbjct: 171 SDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDN 230
Query: 58 VAATALAAMNKRVFLEKEMKVNWAS------------------------SPGNQPKQDTS 93
+ A+ MN + M++ A+ S G Q + D++
Sbjct: 231 ERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSA 290
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N IFVG L P + + L++ F+ +GEI + +I KG FV F + +AE A
Sbjct: 291 N-TTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNDAEEA 343
Query: 154 ITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ-----SSPTNCT 208
+ +NG +G +++R +W + PA R N +Y+ +SP + +
Sbjct: 344 LQKLNGTVIGKQTVRLSWG--RNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPS 401
Query: 209 VYCGGFG 215
+Y +G
Sbjct: 402 MYHAAYG 408
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 141/281 (50%), Gaps = 13/281 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L FS V KVIR ++ Y F+EF+ + A AL +
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ E+ ++NWAS S G + + IFVGDL+P++ L E FA +
Sbjct: 180 FSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPS 239
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T +SKGY FV F + E A+T MNG + SR +R +T K A
Sbjct: 240 VKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYG 299
Query: 182 ERKRQNSHTKTITFDEVYNQS----SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
++ S T+ N S N T++ GG D+ EE + + FS FG +V ++
Sbjct: 300 QQN--GSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVK 357
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ KG FV+F +++A AI +++ T I +TV+ WG+
Sbjct: 358 IPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGR 398
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 1 MCD-ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVA 59
M D ES +T++VG LD VTEE L FS G V K+ P F++F + A
Sbjct: 319 MSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI---PVGKGCGFVQFANRQSA 375
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
A+ +N V + ++++W SP Q + D+ N ++
Sbjct: 376 EEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWN 413
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 141/281 (50%), Gaps = 13/281 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L FS V KVIR ++ Y F+EF+ + A AL +
Sbjct: 125 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 184
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ E+ ++NWAS S G + + IFVGDL+P++ L E FA +
Sbjct: 185 FSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPS 244
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T +SKGY FV F + E A+T MNG + SR +R +T K A
Sbjct: 245 VKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYG 304
Query: 182 ERKRQNSHTKTITFDEVYNQS----SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
++ S T+ N S N T++ GG D+ EE + + FS FG +V ++
Sbjct: 305 QQN--GSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVK 362
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ KG FV+F +++A AI +++ T I +TV+ WG+
Sbjct: 363 IPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGR 403
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES +T++VG LD VTEE L FSQ G V K+ P F++F + A A+
Sbjct: 328 ESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKI---PVGKGCGFVQFANRQSAEEAI 384
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+N V + ++++W SP Q + DT N ++
Sbjct: 385 GNLNGTVIGKNTVRLSWGRSPNKQWRSDTGNQWN 418
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + FS G V KVIR + Y F+EF H A L
Sbjct: 107 TIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQN 166
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + ++ ++NWAS G + + +T + IFVGDL+ ++ L+E F+ + +
Sbjct: 167 YNGSMMPNADQPFRLNWASFAGER-RTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSV 225
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F + E A+ MNG + SR +R +T +K PA
Sbjct: 226 KGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQQ 285
Query: 182 ERKRQ-----NSHTKTITFDE-VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
+ Q H + + + N T++ GG D+++E + + FS FG +V
Sbjct: 286 QYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVVS 345
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+++ KG FV+F +++A A++S++ T I TV+ WG+ N
Sbjct: 346 VKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGKQTVRLSWGRSPAN 392
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 92 TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
T + I+VGDL ++ L F+ GE+++ +++R+ QT + +GY F+ F A AE
Sbjct: 102 TEDSKTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAE 161
Query: 152 NAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
+ NG + + R NW++ ER+ + + ++ ++
Sbjct: 162 KVLQNYNGSMMPNADQPFRLNWAS-----FAGERRTE----------------TGSDLSI 200
Query: 210 YCGGFGKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATHAI 259
+ G D+ + ++ + FS + D+ + KGY FV+F + + A+
Sbjct: 201 FVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDENERSRAM 257
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG +D +++E L FSQ G V K+ P F++F A AL
Sbjct: 313 DSNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKI---PAGKGCGFVQFADRKSAEDAL 369
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++N ++ ++++W SP N Q + D +N ++
Sbjct: 370 QSLNGTTIGKQTVRLSWGRSPANKQWRGDHNNQWN 404
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 28/297 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+Q G V KVIR ++ Y F+EF H A L +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQS 139
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQD------TSNHYHIFVGDLSPEIETQTLKEAFA 117
N + E+ ++NW++ + + D + + IFVGDL+ ++ L++ F+
Sbjct: 140 YNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTFS 199
Query: 118 P-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
+ + ++V D T +SKGY FV F ++E A+T MNG + SR++R +T K
Sbjct: 200 SRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKK 259
Query: 177 PA-----------MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
P+ + + T+T D S +N TV+ GG ++ +E + +
Sbjct: 260 PSPMQQYFPQAVILAGGHASNGAATQTSQTD-----SDLSNTTVFVGGLDSEVTDEELRQ 314
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FS FG +V +++ KG FV+F+ + A AIE ++ T I TV+ WG+ N
Sbjct: 315 SFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPAN 371
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD VT+E L FSQ G V K+ P F++F + A A+ +N
Sbjct: 296 TTVFVGGLDSEVTDEELRQSFSQFGNVVSVKI---PAGKGCGFVQFSERSAAEDAIEKLN 352
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
V + ++++W +P N Q + D+ + ++
Sbjct: 353 GTVIGAQTVRLSWGRNPANKQFRTDSGSQWN 383
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 160/345 (46%), Gaps = 28/345 (8%)
Query: 9 TLYVGNLDVSVTEELL-----CALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
TL++G+L + E L A+ QI VK + + ++ Y F+EF A L
Sbjct: 115 TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAAEHTL 174
Query: 64 AAMNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N ++ EM K+NWAS+ + D+ + IFVGDL+ ++ L++ F A +
Sbjct: 175 MNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYP 234
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +V D T KG+ FV F E A+T MNG L +R +R + K
Sbjct: 235 SVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANK----- 289
Query: 181 NERKRQNSHTKTITFDEVYNQSS---PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
R Q ++ + SS P N TV+ GG ++NEE + ++F+P+G I ++
Sbjct: 290 KNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVK 349
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQP 297
+ K FV+FT++ A AI ++ + + G V+ WG+ S N +Q A
Sbjct: 350 IPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGR-SPQNRQASQHDANNQYNG 408
Query: 298 NSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLP--QQFYQYGQLG 340
NS Y QQ GY + Y A++AQ P Q +Y Y G
Sbjct: 409 NS------YYGYQQPGY---EGYGYGASSAQDPSMQNYYGYSGCG 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPG-NDPYAFLEFVHHTV 58
D T++VG+L VT+ +L +F P V+G V+ R G + F+ F
Sbjct: 204 DSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNE 263
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDT------------------SNHYHIFV 100
A A+ MN + ++M++ A++ N+ Q T N+ +FV
Sbjct: 264 QARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFV 323
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G L + + L++ F P+GEIS +I K FV F ++ AE AI +NG
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIP------VGKHCGFVQFTSRSCAEEAIRMLNGS 377
Query: 161 WLGSRSIRTNWSTRKP 176
+G + +R +W R P
Sbjct: 378 QVGGQKVRLSWG-RSP 392
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V EE L +F+ G + K+ P F++F + A A+ +N
Sbjct: 319 TTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI---PVGKHCGFVQFTSRSCAEEAIRMLN 375
Query: 68 KRVFLEKEMKVNWASSPGNQ--PKQDTSNHYH 97
++++++W SP N+ + D +N Y+
Sbjct: 376 GSQVGGQKVRLSWGRSPQNRQASQHDANNQYN 407
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 13/289 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FS G V KVIR N + Y FLEF+ A L
Sbjct: 73 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQT 132
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + + ++NWA+ + + D S Y IFVGDL+ ++ L E F + +
Sbjct: 133 YNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSV 192
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
++V D T +SKGY FV F ++E A+T M G +R +R S + T+
Sbjct: 193 KGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTS 252
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ QN N++ P N T++ G ++ +E + +VF+ +G +V +++
Sbjct: 253 KASYQNPQGG------AQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSG 306
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F + +A A+ ++ T + G V+ WG+ N T P+
Sbjct: 307 KRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPN 355
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L V++ L +F ++ VKG KV+ R G Y F+ F +
Sbjct: 160 DDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESE 219
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP---------------GNQPKQDTSNHYHIFVGDL 103
A+ M + + M++ AS+ G ++ N+ IFVG+L
Sbjct: 220 QMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNL 279
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + + LK+ F +GE+ + +I K FV F ++ AE A+ +NG LG
Sbjct: 280 DPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLNGTLLG 333
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 334 GQNVRLSWG-RSP 345
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
+E+ P TT++VGNLD +VT+E L +F+Q G + K+ P F++F + A
Sbjct: 265 NENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKI---PSGKRCGFVQFADRSSAE 321
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + + ++++W SP N+ Q N ++
Sbjct: 322 EALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWN 358
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E LYVG L SVT+++L LFS G +K K++ + PG + YAF+EF + A
Sbjct: 75 EVSKKILYVGGLHKSVTDDMLKDLFSVAGGIKSVKILNDKNKPGFN-YAFIEFDTNQAAD 133
Query: 61 TALAAMNKRVFLEKEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
AL +N R+ E+K+NWA SS N ++IFVGDLSPE++ +TL AF+
Sbjct: 134 MALHTLNGRIINNSEIKINWAFQSSTINTAAHPDEPTFNIFVGDLSPEVDDETLTRAFSK 193
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F + ++ D QT +S+GY FV+F +A+AE A+ MNG+W+ R+IR NW++ K
Sbjct: 194 FQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGRAIRCNWASHK 250
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 25/190 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L + LK+ F+ G I + +I+ D + YAF+ F A+ A+ +
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILND-KNKPGFNYAFIEFDTNQAADMALHTL 139
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + I+ NW+ + T +H TF+ ++ G +
Sbjct: 140 NGRIINNSEIKINWAFQSSTINTA------AHPDEPTFN------------IFVGDLSPE 181
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E +++ FS F T+ D++ + +GY FV F T+ A A+++++ ING
Sbjct: 182 VDDETLTRAFSKFQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGRA 241
Query: 272 VKCFWGKESE 281
++C W +
Sbjct: 242 IRCNWASHKQ 251
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 35/286 (12%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHHT 57
+PT ++VG+L V +E L FS+ +K V+ R G Y F+ F
Sbjct: 167 DEPTFNIFVGDLSPEVDDETLTRAFSKFQTLKQAHVMWDMQTSRSRG---YGFVTFGTQA 223
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A AL MN + ++ NWAS + + + + + + F
Sbjct: 224 DAELALQTMNGEWINGRAIRCNWASHKQMNGNNGGNYRNNRHLHHHNNNNNNNSNRGQFR 283
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM-NGQWLGSRSIRTNWSTRKP 176
PF + + + + NA + NGQ+ I N P
Sbjct: 284 PFN---------------------TNGIPQQQMGNANGGLSNGQFQPQGGIPQNLQPNAP 322
Query: 177 PAMTNERKRQNSHTKTIT---FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
++ ++ +D V Q+ TVY G + + + FG I
Sbjct: 323 GGANGSGASGQANIPVMSPQSYDIVLRQTPSWQTTVYLGNIAHFTQQNELIPLLQNFGFI 382
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
VD + E+G AFVK+ + E A AI + +NG +KC WGK+
Sbjct: 383 VDFKFHPERGCAFVKYDSHERAALAIVQLAGFTVNGRPLKCGWGKD 428
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAIESIH 263
+Y GG K + ++++ +FS G I +++ +K YAF++F T + A A+ +++
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILNDKNKPGFNYAFIEFDTNQAADMALHTLN 140
Query: 264 NTDINGHTVKCFWGKESENNSTLAQPSAPT 293
IN +K W +S +T A P PT
Sbjct: 141 GRIINNSEIKINWAFQSSTINTAAHPDEPT 170
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 16/286 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + F+ G V K+IR + Y F+EFV H A L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F A + +
Sbjct: 81 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSV 140
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM--T 180
++V DP T +SKGY FV F + E A++ MNG + +R +R + +T K P + +
Sbjct: 141 RGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATPKKPLVFSS 200
Query: 181 NERKRQNSHTKTITFDEVYNQSSPT--------NCTVYCGGFGKDLNEELVSKVFSPFGT 232
N + + +++ Y S P N T++ G ++ EE + + F FG
Sbjct: 201 NTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGE 260
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
I +++ KG FV+F T+ +A AI+ + I V+ WG+
Sbjct: 261 IAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
++ TT++VGNLD ++TEE L F Q G + K+ P F++F A A+
Sbjct: 231 DANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKI---PAGKGCGFVQFGTRASAEEAI 287
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
M ++ ++ ++ +W +P KQD +
Sbjct: 288 QKMQGKIIGQQVVRTSWGRNPA--AKQDLT 315
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 160/345 (46%), Gaps = 28/345 (8%)
Query: 9 TLYVGNLDVSVTEELL-----CALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
TL++G+L + E L A+ QI VK + + ++ Y F+EF A L
Sbjct: 115 TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAAEHTL 174
Query: 64 AAMNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N ++ EM K+NWAS+ + D+ + IFVGDL+ ++ L++ F A +
Sbjct: 175 MNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYP 234
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +V D T KG+ FV F E A+T MNG L +R +R + K
Sbjct: 235 SVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANK----- 289
Query: 181 NERKRQNSHTKTITFDEVYNQSS---PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
R Q ++ + SS P N TV+ GG ++NEE + ++F+P+G I ++
Sbjct: 290 KNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVK 349
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQP 297
+ K FV+FT++ A AI ++ + + G V+ WG+ S N +Q A
Sbjct: 350 IPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGR-SPQNRQASQHDANNQYNG 408
Query: 298 NSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLP--QQFYQYGQLG 340
NS Y QQ GY + Y A++AQ P Q +Y Y G
Sbjct: 409 NS------YYGYQQPGY---EGYGYGASSAQDPSMQNYYGYSGCG 444
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPG-NDPYAFLEFVHHTV 58
D T++VG+L VT+ +L +F P V+G V+ R G + F+ F
Sbjct: 204 DSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNE 263
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDT------------------SNHYHIFV 100
A A+ MN + ++M++ A++ N+ Q T N+ +FV
Sbjct: 264 QARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFV 323
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G L + + L++ F P+GEIS +I K FV F ++ AE AI +NG
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIP------VGKHCGFVQFTSRSCAEEAIRMLNGS 377
Query: 161 WLGSRSIRTNWSTRKP 176
+G + +R +W R P
Sbjct: 378 QVGGQKVRLSWG-RSP 392
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V EE L +F+ G + K+ P F++F + A A+ +N
Sbjct: 319 TTVFVGGLDSNVNEEYLRQIFTPYGEISYVKI---PVGKHCGFVQFTSRSCAEEAIRMLN 375
Query: 68 KRVFLEKEMKVNWASSPGNQ--PKQDTSNHYH 97
++++++W SP N+ + D +N Y+
Sbjct: 376 GSQVGGQKVRLSWGRSPQNRQASQHDANNQYN 407
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+H A AL
Sbjct: 204 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQKALDT 263
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ K N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 264 MNFDVIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSTFGKILSS 320
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG L + R + + +RK
Sbjct: 321 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRE------ 372
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ N++S TN VY FG D+++ + +VFS +GT + ++V
Sbjct: 373 -----------SELKNKASEFTN--VYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSS 419
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F + E A +A+E ++ DING + F G+
Sbjct: 420 GKSKGFGFVSFASHEAAKNAVEEMNGKDINGQLI--FVGR 457
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 33/277 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 293 VFIKNLDKSIDNKTLYEHFSTFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 352
Query: 69 ------RVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
RVF+ + ++ K S ++++ + +++ LKE F+ +G
Sbjct: 353 TLLKNCRVFVSR---FKSRKDRESELKNKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTT 409
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D KSKG+ FVSF A+NA+ MNG+ + + I + +K
Sbjct: 410 LSVKVMTDSSG-KSKGFGFVSFASHEAAKNAVEEMNGKDINGQLIFVGRAQKKI------ 462
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+RQ + E Q C +Y +++E + K F+ FG+I ++V
Sbjct: 463 -ERQAELKQMF---EQLRQERFRRCRGVKLYIKNLDDTIDDEKLRKEFASFGSISRVKVM 518
Query: 240 KE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+E KG+ + F++ E A A+ T++NG +
Sbjct: 519 QEEGRSKGFGLICFSSHEEAIKAM-----TEMNGRIL 550
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + + L +FS+ G KV+ + + F+ F H A A
Sbjct: 380 SEFTNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSKGFGFVSFASHEAAKNA 439
Query: 63 LAAMNKR------VF-------LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN + +F +E++ ++ Q + +++ +L I+
Sbjct: 440 VEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERFRRCRGVKLYIKNLDDTIDD 499
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++ FA FG IS +++++ +SKG+ + F EA A+T MNG+ LGS+ +
Sbjct: 500 EKLRKEFASFGSISRVKVMQEEG--RSKGFGLICFSSHEEAIKAMTEMNGRILGSKPLNI 557
Query: 170 NWSTR 174
+ R
Sbjct: 558 ALAQR 562
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 13/286 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPG-NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G V KVI ++ G ++ Y F+EF HT A L
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA+ N + DT + IFVGDL+ ++ L+E F+ + +
Sbjct: 161 YNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSV 220
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA---- 178
++V D + SKGY F F + E A+T MNG + SR +R +T K +
Sbjct: 221 KGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQ 279
Query: 179 --MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
+ H + + S N T++ GG D+++E + + FS FG +V +
Sbjct: 280 GYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSV 339
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
++ KG FV+F ++ A AI+ ++ T I TV+ WG+ + N
Sbjct: 340 KIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGN 385
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 37/199 (18%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREPGNDP---YAFLEFVHHTV 58
D +++VG+L VT+ +L F S+ VKG KV+ + + P Y F F
Sbjct: 188 DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENE 246
Query: 59 AATALAAMNKRVFLEKEMKVNWASS-----------------PGNQPK---------QDT 92
A+ MN + M++ A+ G P
Sbjct: 247 RTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSE 306
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
SN+ IFVG L ++ + LK+AF+ FG++ + +I KG FV F + AE+
Sbjct: 307 SNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIP------IGKGCGFVQFANRKNAED 360
Query: 153 AITAMNGQWLGSRSIRTNW 171
AI +NG +G +++R +W
Sbjct: 361 AIQGLNGTVIGKQTVRLSW 379
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES TT++VG LD V++E L FS+ G V K+ P F++F + A A+
Sbjct: 306 ESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKI---PIGKGCGFVQFANRKNAEDAI 362
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
+N V ++ ++++W S GN Q + D++N ++
Sbjct: 363 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWN 397
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V KVIR ++ Y F+EF+ A L
Sbjct: 67 TLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQT 126
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + ++NWAS+ + +QD S Y IFVGDL+ ++ L+E F A + +
Sbjct: 127 YNGTAMPNGAQNFRLNWASA--GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSV 184
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A+T MNG SR +R + K
Sbjct: 185 KGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANK----NTS 240
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+Q S T N++ P N T++ G ++ +E + +VFS +G +V +++ K
Sbjct: 241 GSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
FV+F+ + A A+ ++ T I G ++ WG+ N A P+
Sbjct: 301 RCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQADPN 348
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI------REPGNDPYAFLEFVH 55
D+S T++VG+L VT+ +L F ++ VKG KV+ R G Y F++F
Sbjct: 152 DDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKG---YGFVKFGD 208
Query: 56 HTVAATALAAMNKRVFLEKEMKVNWASS-----------------PGNQPKQDTSNHYHI 98
+ A+ MN + M++ A++ PG Q + D N+ I
Sbjct: 209 ESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSGSQQFSKTSYQNPPGTQNEND-PNNTTI 267
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVG+L + + L++ F+ +GE+ + +I K FV F ++ AE A+ +N
Sbjct: 268 FVGNLDSNVTDEHLRQVFSQYGELVHVKIP------AGKRCGFVQFSDRSCAEEALRILN 321
Query: 159 GQWLGSRSIRTNW----STRKPPAMTNE 182
G +G ++IR +W S ++P A N+
Sbjct: 322 GTPIGGQNIRLSWGRSPSNKQPQADPNQ 349
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VT+E L +FSQ G + K+ P F++F + A AL +N
Sbjct: 265 TTIFVGNLDSNVTDEHLRQVFSQYGELVHVKI---PAGKRCGFVQFSDRSCAEEALRILN 321
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ ++++W SP N+ Q N ++
Sbjct: 322 GTPIGGQNIRLSWGRSPSNKQPQADPNQWN 351
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 17/287 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + FS G V+ K+IR+ + Y F+EF A L
Sbjct: 93 TLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 153 YNGQMMPNVDLTFRLNWASA---GEKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYPSV 209
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T+++KGY FV F E A+T MNG SR +R PA + +
Sbjct: 210 KGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIG------PAASRK 263
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ +++ P N T++ GG ++ E+ + +VFSP+G +V +++ K
Sbjct: 264 NTGGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGK 323
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
FV+F T+ +A A+ + I V+ WG+ N AQP
Sbjct: 324 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQ--AQP 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + Y F++F T
Sbjct: 177 DDTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTE 236
Query: 59 AATALAAMNKRVFLEKEMKVNWASS------------PGNQPKQ--DTSNHYHIFVGDLS 104
A A+ MN + M++ A+S P +Q Q + N+ IFVG L
Sbjct: 237 QARAMTEMNGMPCSSRPMRIGPAASRKNTGGVVQERVPNSQGAQSENDPNNTTIFVGGLD 296
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P + TLK+ F+P+GE+ + +I K FV FV + AE A+ + G +G+
Sbjct: 297 PNVTEDTLKQVFSPYGEVVHVKIP------VGKRCGFVQFVTRPSAEQALLMLQGALIGA 350
Query: 165 RSIRTNWS 172
+++R +W
Sbjct: 351 QNVRLSWG 358
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE+ L +FS G V K+ P F++FV A AL +
Sbjct: 288 TTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKI---PVGKRCGFVQFVTRPSAEQALLMLQ 344
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDTS 93
+ + ++++W S N QP+Q+++
Sbjct: 345 GALIGAQNVRLSWGRSLSNKQAQPQQESN 373
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L FS V KVIR ++ Y F+EF+ + A AL +
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ E+ ++NWAS S G + + IFVGDL+P++ L E FA +
Sbjct: 180 FSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPS 239
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T +SKGY FV F + E A+T MNG + SR +R +T K A
Sbjct: 240 VKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYG 299
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNC----------------------------TVYCGG 213
+ QN IT + N +S NC T++ GG
Sbjct: 300 Q---QNGSQGLITCLDALNIASEVNCNVFIGLALTLAGGHGGNGSMSDGESNNSTIFVGG 356
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
D+ EE + + FS FG +V +++ KG FV+F +++A AI +++ T I +TV+
Sbjct: 357 LDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVR 416
Query: 274 CFWGK 278
WG+
Sbjct: 417 LSWGR 421
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 1 MCD-ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVA 59
M D ES +T++VG LD VTEE L FS G V K+ P F++F + A
Sbjct: 342 MSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI---PVGKGCGFVQFANRQSA 398
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
A+ +N V + ++++W SP Q + D+ N ++
Sbjct: 399 EEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWN 436
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + + + FS G V+ K+IR+ + Y F+EF A L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 147 YNGQMMPNVDLTFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 203
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T+++KGY FV F E A+T MNG SR +R PA + +
Sbjct: 204 KGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIG------PAASRK 257
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ +++ P N T++ GG ++ E+++ + FSP+G ++ +++ K
Sbjct: 258 NAGGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
FV+F T+ +A A+ + I V+ WG+ N T Q
Sbjct: 318 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQ 363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + Y F++F T
Sbjct: 171 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTE 230
Query: 59 AATALAAMNKRVFLEKEMKVNWASS------------PGNQPKQ--DTSNHYHIFVGDLS 104
A A+ MN + M++ A+S P +Q Q + N+ IFVG L
Sbjct: 231 QARAMTEMNGMPCSSRPMRIGPAASRKNAGGVVQERVPNSQGAQSENDPNNTTIFVGGLD 290
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P + LK+AF+P+GE+ + +I K FV FV + AE A+ + G +G+
Sbjct: 291 PNVTEDVLKQAFSPYGEVIHVKIP------VGKRCGFVQFVTRPSAEQALLMLQGALIGA 344
Query: 165 RSIRTNWS 172
+++R +W
Sbjct: 345 QNVRLSWG 352
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L FS G V K+ P F++FV A AL +
Sbjct: 282 TTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKI---PVGKRCGFVQFVTRPSAEQALLMLQ 338
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDT 92
+ + ++++W S N QP+Q++
Sbjct: 339 GALIGAQNVRLSWGRSLSNKQTQPQQES 366
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + FSQ G + KVIR + Y F+EF+ H A L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS G+ K D + IFVGDL+P++ L+E F + +
Sbjct: 85 YNGTQMPGTELTFRLNWASF-GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSV 143
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F +++E A+ MNG + +R +R + +T K N
Sbjct: 144 RGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPK----KNV 199
Query: 183 RKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+Q TK V +S T T+ +++ EE + K FS G +
Sbjct: 200 GVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEV 259
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
+ +++ KGY +V+F T+ +A A++ + I V+ W K + + Q
Sbjct: 260 IYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQAD--- 316
Query: 294 TPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQ 343
P +N GY AY A Q P Y YG GYPQ
Sbjct: 317 -----------PNQWNGYYGY-GQGYDAYAYGATQDP-SVYAYGGYGYPQ 353
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ V NLD +VTEE L FSQ+G V K+ P Y +++F A A+ M
Sbjct: 233 TTISVANLDQNVTEEELKKAFSQLGEVIYVKI---PATKGYGYVQFKTRPSAEEAVQRMQ 289
Query: 68 KRVFLEKEMKVNWASSPG 85
+V ++ ++++W+ +PG
Sbjct: 290 GQVIGQQAVRISWSKNPG 307
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + + + FS G V+ K+IR+ + Y F+EF A L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 147 YNGQMMPNVDLTFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 203
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T+++KGY FV F E A+T MNG SR +R PA + +
Sbjct: 204 KGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIG------PAASRK 257
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ +++ P N T++ GG ++ E+++ + FSP+G ++ +++ K
Sbjct: 258 NAGGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
FV+F T+ +A A+ + I V+ WG+ N T Q
Sbjct: 318 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQ 363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + Y F++F T
Sbjct: 171 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTE 230
Query: 59 AATALAAMNKRVFLEKEMKVNWASS------------PGNQPKQ--DTSNHYHIFVGDLS 104
A A+ MN + M++ A+S P +Q Q + N+ IFVG L
Sbjct: 231 QARAMTEMNGMPCSSRPMRIGPAASRKNAGGVVQERVPNSQGAQSENDPNNTTIFVGGLD 290
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P + LK+AF+P+GE+ + +I K FV FV + AE A+ + G +G+
Sbjct: 291 PNVTEDVLKQAFSPYGEVIHVKIP------VGKRCGFVQFVTRPSAEQALLMLQGALIGA 344
Query: 165 RSIRTNWS 172
+++R +W
Sbjct: 345 QNVRLSWG 352
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L FS G V K+ P F++FV A AL +
Sbjct: 282 TTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKI---PVGKRCGFVQFVTRPSAEQALLMLQ 338
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDT 92
+ + ++++W S N QP+Q++
Sbjct: 339 GALIGAQNVRLSWGRSLSNKQTQPQQES 366
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 16/301 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L FS G + K+IR ++ Y F+EF+ T A +
Sbjct: 93 TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIMQT 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + E+ ++NWA+ + + D + IFVGDL ++ L+E F + + +
Sbjct: 153 YNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYSSV 212
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F +++E A+T MNG + +R +R + +T RK + +
Sbjct: 213 KAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAGVQH 272
Query: 182 ERKRQ----NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
+ + SH + D N N T++ G + +E + +VF +G +V ++
Sbjct: 273 QYSGRAGNGGSHAQGFPSDNDLN-----NTTIFVGRLDPNATDEDLRQVFGQYGELVSVK 327
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQP 297
+ KG FV+F + +A A++ +H T I TV+ WG+ N P
Sbjct: 328 IPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANKQQPQPQGQQPQSDP 387
Query: 298 N 298
N
Sbjct: 388 N 388
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD + T+E L +F Q G + K+ P F++F + A AL ++
Sbjct: 297 TTIFVGRLDPNATDEDLRQVFGQYGELVSVKI---PVGKGCGFVQFGNRASAEEALQRLH 353
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
V ++ ++++W SP N+
Sbjct: 354 GTVIRQQTVRLSWGRSPANK 373
>gi|294884873|gb|ADF47445.1| TIA1-like protein, partial [Dugesia japonica]
Length = 430
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 18/283 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+Y+ NL ++EE L ++F G C++ E A++EF + + A ALA MN
Sbjct: 2 TIYISNLPSPISEEDLLSIFGSFGACVSCELNLE---TLTAYIEFDNESSAEKALA-MNN 57
Query: 69 RVFLEKEMKV----------NWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
+M V N S K D S IFVG + +I+ LKE FA
Sbjct: 58 TPMESNQMSVEIAYVDNVVQNVTSYTLASKKVDYSQSVQIFVGGIGFDIDEAILKEGFAH 117
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
G++ + ++VR + KG+AFVSF +++A +AI MN +R I+ NW+T+ +
Sbjct: 118 CGQVLDTKVVRS-NDGQHKGFAFVSFSNESDANSAIQKMNNTMFHNRKIQCNWATKNKNS 176
Query: 179 MTNERKRQNSHTK-TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
+ + TK T +++ ++ +N +VY G+ L EEL+ +F FG I +++
Sbjct: 177 NGAPFNPKFNPTKFNKTLEDISYEAPESNTSVYV--LGESLTEELLRPIFERFGKIKNVK 234
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
F EK +AFV + T + A +AI+ ++ IN +KC WGK++
Sbjct: 235 AFPEKNHAFVNYDTHDAAAYAIQQLNGYKINNIELKCNWGKKN 277
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 33/197 (16%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND----PYAFLEFVHHT 57
D SQ ++VG + + E +L F+ G V KV+R ND +AF+ F + +
Sbjct: 89 VDYSQSVQIFVGGIGFDIDEAILKEGFAHCGQVLDTKVVRS--NDGQHKGFAFVSFSNES 146
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGN------QPKQDTSNHYHIFVGDLS---PEIE 108
A +A+ MN +F ++++ NWA+ N PK + + ++ + D+S PE
Sbjct: 147 DANSAIQKMNNTMFHNRKIQCNWATKNKNSNGAPFNPKFNPT-KFNKTLEDISYEAPESN 205
Query: 109 T-----------QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
T + L+ F FG+I N + K +AFV++ A AI +
Sbjct: 206 TSVYVLGESLTEELLRPIFERFGKIKNVK------AFPEKNHAFVNYDTHDAAAYAIQQL 259
Query: 158 NGQWLGSRSIRTNWSTR 174
NG + + ++ NW +
Sbjct: 260 NGYKINNIELKCNWGKK 276
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 141/277 (50%), Gaps = 34/277 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+H A A
Sbjct: 8 RMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTN 181
+ +++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + +RK
Sbjct: 125 LSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREA-- 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF- 239
E+ +++S TN VY FG D+++E + VFS +G + ++V
Sbjct: 181 ---------------ELRSKASEFTN--VYIKNFGGDMDDERLKDVFSKYGKTLSVKVMT 223
Query: 240 ----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F + E A A+E ++ DING +
Sbjct: 224 DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI 260
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V S ++ + S ++++ + +++ + LK+ F+ +G+ +
Sbjct: 160 KLLQGCKVFVGRFKSRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSV 219
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K R
Sbjct: 220 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVE-------R 271
Query: 186 QNSHTKTITFDEVYNQSSPTNCTV---YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C V Y +++E + FS FG+I ++V +E
Sbjct: 272 QAELKQMF---EQLKKERIRGCQVVKLYVKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 328
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E A A+ T++NG +
Sbjct: 329 GQSKGFGLICFSSPEDALKAM-----TEMNGRIL 357
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L F+ G + + RI RD T S GYA+V+F+ A+A+ A+ M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALDTM 71
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + +SIR WS R D +S N V+ K
Sbjct: 72 NFDIIKGKSIRLMWSQR---------------------DAYLRRSGIGN--VFIKNLDKS 108
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + + FS FG I+ +V + KGYAFV F + A AIE ++ + G K
Sbjct: 109 IDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLQG--CK 166
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ + + S A +F +Y + G
Sbjct: 167 VFVGR--------FKSRKDREAELRSKASEFTNVYIKNFG 198
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 187 SEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 246
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + ++V +L I+
Sbjct: 247 VEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKKERIRGCQVVKLYVKNLDDTIDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+
Sbjct: 307 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDALKAMTEMNGRILGSK 360
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L E L + F+ G V K+IR + Y F+EFV H A L
Sbjct: 21 TLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERILQT 80
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 81 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSV 140
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 141 RGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMAT---PKKTTS 197
Query: 183 RKRQNSHTK--------TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
++Q + K T V TN T++ G + EE + + F G I
Sbjct: 198 FQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIA 257
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ +G FV+F T+ +A AI+ + I V+ WGK+ + +T Q
Sbjct: 258 SVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGKKQDLTATWGQ 311
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD + TEE L F Q+G + K+ P F++F T A A+ M
Sbjct: 230 TTIFVGNLDPNATEEDLRQTFLQLGEIASVKI---PAGRGCGFVQFATRTSAEEAIQRMQ 286
Query: 68 KRVFLEKEMKVNWA 81
V ++ ++++W
Sbjct: 287 GHVIGQQPVRISWG 300
>gi|4680340|gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 75/294 (25%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 74 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRSAAIA 132
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + + +V W
Sbjct: 133 IVSLNGR---QLDARVMW------------------------------------------ 147
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
D +T +S+G+ FVSF + +A+NAI +NG+WLG+R +R NW+T+ A
Sbjct: 148 -------DQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANA---G 197
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QN+ +K + E+ N SS P TVY G D+N V + F
Sbjct: 198 EEKQNTDSKGMI--ELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFF 255
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G+I ++RV ++KG+ FV+++T E A AI++ + I G +KC WG +
Sbjct: 256 HSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSK 309
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQ--IGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
Q TT+YVGNL V + F +G ++ +V R+ G + F+ + H AA A+
Sbjct: 233 QYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKG---FGFVRYSTHEEAALAI 289
Query: 64 AAMNKRVFLEKEMKVNWASSP 84
N ++ +++K +W S P
Sbjct: 290 QTGNGQLIGGRQIKCSWGSKP 310
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L + FS G V KVIR ++ Y F+EF+ A L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ V ++ ++NWAS S G + + +FVGDLSP++ L E F+ +
Sbjct: 169 YSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPS 228
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + ++V D T +SKGY FV F + E A+T MNG + +R +R +T P
Sbjct: 229 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT--PKRAIA 286
Query: 182 ERKRQNSHTKTITFDEVYNQS---------SPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+++ +S + N S TN T++ GG D+ +E + + FS FG
Sbjct: 287 NQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGE 346
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F +++A AIES++ T I +TV+ WG+
Sbjct: 347 VVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGR 392
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES T++VG +D V +E L FSQ G V K+ P F++F A A+
Sbjct: 317 ESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI---PVGKGCGFVQFADRKSAEDAI 373
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++N V + ++++W SP Q + D+ ++
Sbjct: 374 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 407
>gi|448521353|ref|XP_003868484.1| Pub1 protein [Candida orthopsilosis Co 90-125]
gi|380352824|emb|CCG25580.1| Pub1 protein [Candida orthopsilosis]
Length = 426
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAAT 61
E+ LYVGNL S +EE + LFS P+K K++ + YAF+EF + A
Sbjct: 55 ETSNKILYVGNLPKSASEEQISKLFSVSKPIKSIKLLNDKNKLGFNYAFIEFDENQDADM 114
Query: 62 ALAAMNKRVFLEKEMKVNWA----SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
AL+ +N ++ E+KVNWA + N +D + Y++FVGDLS E+ + LK+AF
Sbjct: 115 ALSTLNGKLLNNCEIKVNWAYQSATIASNSTPEDPT--YNVFVGDLSSEVNDEALKKAFN 172
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F ++ D QT +S+GY FV+F K+ +AE A+ MNG+WLG R+IR NW+ K
Sbjct: 173 KFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQTMNGEWLGGRAIRCNWAAHK-- 230
Query: 178 AMTNERKRQNSH 189
+N R NSH
Sbjct: 231 -QSNNRDYANSH 241
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
++TSN ++VG+L + + + F+ I + +++ D L YAF+ F + +
Sbjct: 54 RETSNKI-LYVGNLPKSASEEQISKLFSVSKPIKSIKLLNDKNKL-GFNYAFIEFDENQD 111
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
A+ A++ +NG+ L + I+ NW+ + +N + D YN V
Sbjct: 112 ADMALSTLNGKLLNNCEIKVNWAYQSATIASN----------STPEDPTYN--------V 153
Query: 210 YCGGFGKDLNEELVSKVFSPFGT------IVDIRVFKEKGYAFVKFTTKETATHAIESIH 263
+ G ++N+E + K F+ F + + D++ + +GY FV F +E A A+++++
Sbjct: 154 FVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQTMN 213
Query: 264 NTDINGHTVKCFWGKESENNS 284
+ G ++C W ++N+
Sbjct: 214 GEWLGGRAIRCNWAAHKQSNN 234
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 31/281 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHHTVAATA 62
++VG+L V +E L F++ K V+ R G Y F+ F A A
Sbjct: 152 NVFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRG---YGFVTFGKQEDAELA 208
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF-GE 121
L MN + ++ NWA+ KQ + Y G + + F P+ G+
Sbjct: 209 LQTMNGEWLGGRAIRCNWAAH-----KQSNNRDYANSHGLRN---HNRYNHRQFRPYNGK 260
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
N + S+ A + + N LGS+ I PP N
Sbjct: 261 NFNTYHSNQYSSNGSQHIAPGLIIPELNLSNGSLP-----LGSQQI-----VNSPPNGLN 310
Query: 182 ERKRQNSHTKTIT---FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+Q + ++ +D V Q+ TVY G ++ + + FG IVD +
Sbjct: 311 GNAQQTGNITVMSPQSYDIVLRQTPSWQTTVYLGNIAHVTQQQEMIPLLQNFGFIVDFKF 370
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
EKG AFVK+ + E A AI + ++NG +KC WGKE
Sbjct: 371 HPEKGCAFVKYDSHERAALAIIQLAGFNLNGRPLKCGWGKE 411
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 16/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR + Y F+EF H A L
Sbjct: 62 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 121
Query: 66 MNKR---VFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N F ++ ++ WAS S G+ K+D S Y IFVGDL+ ++ L E F A +
Sbjct: 122 FNNAPIPSFPDQLFRLXWASLSSGD--KRDDSPDYTIFVGDLAADVTDYILLETFRASYP 179
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V + T ++KGY FV F ++E A+T MNG +R +R + K +T
Sbjct: 180 SVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK-GVT 238
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+R S +T D + P N TV+ GG + ++ + VFS +G IV +++
Sbjct: 239 GQRDSYQSSAAGVTTD-----NDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA 293
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
K FV+F+ K A A+ ++ + G TV+ WG+ N +
Sbjct: 294 GKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQS 338
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 149 DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESE 208
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHIFVGDLS 104
A+ MN + M++ A+S Q S N+ +FVG L
Sbjct: 209 QIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLD 268
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ LK F+ +GEI + +I K FV F +K+ AE A+ +NG LG
Sbjct: 269 ASVTDDHLKNVFSQYGEIVHVKIP------AGKRCGFVQFSEKSCAEEALRMLNGVQLGG 322
Query: 165 RSIRTNWSTRKP 176
++R +W R P
Sbjct: 323 TTVRLSWG-RSP 333
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT++ L +FSQ G + K+ P F++F + A AL +N
Sbjct: 260 TTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI---PAGKRCGFVQFSEKSCAEEALRMLN 316
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++++W SP N+ D S Y+
Sbjct: 317 GVQLGGTTVRLSWGRSPSNKQSGDPSQFYY 346
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 19/277 (6%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E + A F+ G ++ K+IR+ Y F+EF H A L N + +E
Sbjct: 1 MDENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVE 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRDPQ 132
+ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + + ++V D
Sbjct: 61 QTYRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKM 117
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T++SKGY FV F +E A+T MNG SR +R + K K K
Sbjct: 118 TMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANK--------KATGVQEKV 169
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
+ V + S P+N T++ GG + ++++ +VF+P+G +V +++ K FV+F +
Sbjct: 170 PSAQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANR 229
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
+A A+ + T I G V+ WG+ N AQP
Sbjct: 230 ASADEALVLLQGTLIGGQNVRLSWGRSPSNRQ--AQP 264
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ + + Y F++F +
Sbjct: 75 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSE 134
Query: 59 AATALAAMNKRVFLEKEMKVNWA-------------SSPGNQPKQDTSNHYHIFVGDLSP 105
A A+ MN V + M++ A S+ G Q D SN IFVG L P
Sbjct: 135 QARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNT-TIFVGGLDP 193
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ LK+ F P+G++ + +I K FV F +A A+ A+ + G +G +
Sbjct: 194 SVTDDMLKQVFTPYGDVVHVKIP------VGKRCGFVQFANRASADEALVLLQGTLIGGQ 247
Query: 166 SIRTNWSTRKPPAMTNERKRQNSH 189
++R +W + P+ + +Q+S+
Sbjct: 248 NVRLSWG--RSPSNRQAQPQQDSN 269
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 14/291 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G V KVIR ++ Y F+EF A L
Sbjct: 67 TLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 126
Query: 66 MNKRVFLE--KEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGE 121
N + + ++NWA+ S G + + D S Y IFVGDL+ ++ L+E F A +
Sbjct: 127 YNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRARYNS 186
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T ++KGY FV F ++E A+T M G +R +R ++ K P +
Sbjct: 187 VKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIGPASNKTPTTQS 246
Query: 182 ERKR--QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+ K QNS + N++ P N T++ G ++ ++ + +VFS +G +V +++
Sbjct: 247 QPKASYQNSQPQGSQ-----NENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 301
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F + A A+ ++ T + G V+ WG+ N A P+
Sbjct: 302 AGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQADPN 352
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ LL F ++ VKG KV+ R G Y F+ F +
Sbjct: 155 DDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESE 214
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPG----NQPK-------------QDTSNHYHIFVG 101
A+ M + + M++ AS+ +QPK ++ N+ IFVG
Sbjct: 215 QVRAMTEMQGVLCSTRPMRIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVG 274
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
+L P + L++ F+ +GE+ + +I K FV F ++ AE A+ +NG
Sbjct: 275 NLDPNVTDDHLRQVFSQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTL 328
Query: 162 LGSRSIRTNWSTRKP 176
LG +++R +W R P
Sbjct: 329 LGGQNVRLSWG-RSP 342
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
+E+ P TT++VGNLD +VT++ L +FSQ G + K+ P F++F + A
Sbjct: 262 NENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKI---PAGKRCGFVQFADRSCAE 318
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + + ++++W SP N+ Q N ++
Sbjct: 319 EALRVLNGTLLGGQNVRLSWGRSPSNKQAQADPNQWN 355
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 136/280 (48%), Gaps = 11/280 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E + ++FS G V KVIR + Y F+EFV H A L
Sbjct: 68 SLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERILQT 127
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N E+ ++NWA+ + +QD Y +F+GDL+ ++ L+E F + +
Sbjct: 128 YNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSV 187
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+ MNGQ+ +R +R + K P +T +
Sbjct: 188 KGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKP-LTQQ 246
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ + E S P N T++ G + ++ + VFS +G +V +++ K
Sbjct: 247 YQKAAYQSPQGNQGE----SDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGK 302
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F + A A+ ++ T I G ++ WG+ N
Sbjct: 303 RCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSN 342
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 4 ESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES P TT++VG LD SVT++ L A+FS+ G + K+ P F++F + T A
Sbjct: 261 ESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKI---PAGKRCGFVQFANRTCAEQ 317
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQ 87
AL+ +N + ++++W SP N+
Sbjct: 318 ALSMLNGTQIAGQNIRLSWGRSPSNK 343
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F G V KVIR ++ Y F+EF A L
Sbjct: 58 TLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVLQT 117
Query: 66 MNKRVFLE--KEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + ++NWA S+ +QD + IFVGDL+ ++ L+E F A +
Sbjct: 118 YQGAIMPNGGQSYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYN 177
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T +SKGY FV F + E A+T M G +R +R +T K PA T
Sbjct: 178 SVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAAT 237
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ K S+T +++ P N T++ G ++ ++ + +VFS +G +V +++
Sbjct: 238 TQAKASYSNTPGGQ-----SENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPS 292
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F+ + +A AI ++ T + G V+ WG+ N T P+
Sbjct: 293 GKRCGFVQFSDRSSAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDPN 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+ T++VG+L VT+ LL F ++ VKG KV+ R G Y F+ F
Sbjct: 147 DDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGE 206
Query: 59 AATALAAM----------------NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGD 102
A+ M NK + K +++++PG Q + D N+ IFVG+
Sbjct: 207 QMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQAKASYSNTPGGQSEND-PNNTTIFVGN 265
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L P + L++ F+ +GE+ + +I K FV F ++ AE AI +NG L
Sbjct: 266 LDPNVTDDHLRQVFSQYGELVHVKIP------SGKRCGFVQFSDRSSAEEAIRVLNGTLL 319
Query: 163 GSRSIRTNW 171
G +++R +W
Sbjct: 320 GGQNVRLSW 328
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VT++ L +FSQ G + K+ P F++F + A A+ +N
Sbjct: 259 TTIFVGNLDPNVTDDHLRQVFSQYGELVHVKI---PSGKRCGFVQFSDRSSAEEAIRVLN 315
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ + ++++W +P N+ Q N ++
Sbjct: 316 GTLLGGQNVRLSWGRTPSNKQTQQDPNQWN 345
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 12/174 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAAM 66
LYVGNL S++EE L F+ G ++ K++ + PG + YAF+E+ ++ A AL M
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKILNDKNKPGFN-YAFIEYENNQAADMALNTM 131
Query: 67 NKRVFLEKEMKVNWA-----SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
N ++ E+K+NWA + N P+ + ++IFVGDLSPEI + LK+AF+ F
Sbjct: 132 NGKILQNFEIKINWAFQSATITTANTPEDPS---FNIFVGDLSPEINDEKLKQAFSKFKS 188
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT +S+GY FV+F +++AE A+ MNG+WL R+IR NW++ K
Sbjct: 189 LKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTMNGEWLNGRAIRCNWASHK 242
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 25/193 (12%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+LS I + LK+ FA G I + +I+ D + YAF+ + A+ A+ M
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKILND-KNKPGFNYAFIEYENNQAADMALNTM 131
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ L + I+ NW+ + + TIT N + ++ G +
Sbjct: 132 NGKILQNFEIKINWAFQ---------------SATIT---TANTPEDPSFNIFVGDLSPE 173
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+N+E + + FS F ++ D++ + +GY FV F+ + A A+++++ +NG
Sbjct: 174 INDEKLKQAFSKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTMNGEWLNGRA 233
Query: 272 VKCFWGKESENNS 284
++C W + N+
Sbjct: 234 IRCNWASHKQLNN 246
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
++D V Q+ TVY G + + + + FG IVD + E+G AFVK+ E
Sbjct: 350 SYDIVLRQTPSWQTTVYLGNIAHFTQQGDLIPLLTNFGYIVDFKFHPERGCAFVKYDNHE 409
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + +ING +KC WGK+
Sbjct: 410 RAALAIVQLAGFNINGRPLKCGWGKD 435
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK-----GYAFVKFTTKETATHAI 259
+N +Y G K ++EE + F+ G I +++ +K YAF+++ + A A+
Sbjct: 69 SNKILYVGNLSKSISEEFLKDTFASAGAIQSVKILNDKNKPGFNYAFIEYENNQAADMAL 128
Query: 260 ESIHNTDINGHTVKCFWGKESENNSTLAQPSAPT 293
+++ + +K W +S +T P P+
Sbjct: 129 NTMNGKILQNFEIKINWAFQSATITTANTPEDPS 162
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F G V+ K+IR+ + Y F+EF A L
Sbjct: 93 TLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ +E ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 153 YNGQMMPNVELTFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 209
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
++V D T+++KGY FV F E A+T MNG SR +R ++RK
Sbjct: 210 KGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGGVV 269
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ + NS +++ P N T++ GG ++ E+ + +VFSP+G +V +++
Sbjct: 270 QERVPNSQGAQ-------SENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVG 322
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
K FV+F T+ +A A+ + I V+ WG+ N AQP
Sbjct: 323 KRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQ--AQP 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + Y F++F T
Sbjct: 177 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTE 236
Query: 59 AATALAAMNKRVFLEKEMKVNWASS------------PGNQPKQ--DTSNHYHIFVGDLS 104
A A+ MN + M++ A+S P +Q Q + N+ IFVG L
Sbjct: 237 QARAMTEMNGMPCSSRPMRIGPAASRKNTGGVVQERVPNSQGAQSENDPNNTTIFVGGLD 296
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
P + TLK+ F+P+GE+ + +I K FV FV + AE A+ + G +G+
Sbjct: 297 PNVTEDTLKQVFSPYGEVVHVKIP------VGKRCGFVQFVTRPSAEQALLMLQGALIGA 350
Query: 165 RSIRTNWS 172
+++R +W
Sbjct: 351 QNVRLSWG 358
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE+ L +FS G V K+ P F++FV A AL +
Sbjct: 288 TTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKI---PVGKRCGFVQFVTRPSAEQALLMLQ 344
Query: 68 KRVFLEKEMKVNWASSPGN---QPKQDTS 93
+ + ++++W S N QP+Q+++
Sbjct: 345 GALIGAQNVRLSWGRSLSNKQAQPQQESN 373
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 20/290 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L FS G V K+IR + Y F+EFV H+ A L
Sbjct: 16 TLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQT 75
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D + IFVGDL+P++ L+E F +G +
Sbjct: 76 YNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSV 135
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F ++E A++ MNG + +R +R + +T K +
Sbjct: 136 RGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQ 195
Query: 183 RKRQNSHTKTITFDEVY----------NQSSP----TNCTVYCGGFGKDLNEELVSKVFS 228
+Y N P N T+Y G +++EE + + F
Sbjct: 196 NPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFL 255
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
FG IV ++V K FV+F + +A AI+ + + ++ WG+
Sbjct: 256 QFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGR 305
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+YVGNLD++V+EE L F Q G + KV PG F++F A A+ M
Sbjct: 234 TTIYVGNLDLNVSEEELKQNFLQFGEIVSVKV--HPGK-ACGFVQFGARASAEEAIQKMQ 290
Query: 68 KRVFLEKEMKVNWA 81
++ ++ ++V+W
Sbjct: 291 GKILGQQVIRVSWG 304
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L + FS G V KVIR ++ Y F+EF+ A L
Sbjct: 66 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 125
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ V ++ ++NWAS S G + + +FVGDLSP++ L E F+ +
Sbjct: 126 YSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPS 185
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + ++V D T +SKGY FV F + E A+T MNG + +R +R +T P
Sbjct: 186 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT--PKRAIA 243
Query: 182 ERKRQNSHTKTITFDEVYNQS---------SPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+++ +S + N S TN T++ GG D+ +E + + FS FG
Sbjct: 244 NQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGE 303
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F +++A AIES++ T I +TV+ WG+
Sbjct: 304 VVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGR 349
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES T++VG +D V +E L FSQ G V K+ P F++F A A+
Sbjct: 274 ESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI---PVGKGCGFVQFADRKSAEDAI 330
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
++N V + ++++W SP Q + D+ ++
Sbjct: 331 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 364
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V+ K+IR+ + Y F+EF A L
Sbjct: 40 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 99
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ EM ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 100 YNGQMMPNVEMVFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 156
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T++SKGY FV F E A+T MNG SR +R + K E
Sbjct: 157 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 216
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R ++ ++ P N T++ GG ++ E+++ +VF+P+G +V +++ K
Sbjct: 217 RVPNAQGAQS--------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 268
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV++ + +A A+ + T I G V+ WG+ N
Sbjct: 269 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSN 308
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + + Y F++F T
Sbjct: 124 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 183
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP-------------GNQPKQDTSNHYHIFVGDLSP 105
A A+ MN + + M++ A++ G Q + D N+ IFVG L P
Sbjct: 184 QARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPNAQGAQSEND-PNNTTIFVGGLDP 242
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ LK+ FAP+GE+ + +I K FV +V + AE A+ + G +G +
Sbjct: 243 NVTEDVLKQVFAPYGEVVHVKIP------VGKRCGFVQYVNRPSAEQALAVLQGTLIGGQ 296
Query: 166 SIRTNWSTRKPPAMTNERKRQNSH 189
++R +W +++N++ + +S+
Sbjct: 297 NVRLSWGR----SLSNKQPQHDSN 316
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +VTE++L +F+ G V K+ P F+++V+ A ALA +
Sbjct: 233 TTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKI---PVGKRCGFVQYVNRPSAEQALAVLQ 289
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+ + ++++W S N+ Q SN +
Sbjct: 290 GTLIGGQNVRLSWGRSLSNKQPQHDSNQW 318
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 156/345 (45%), Gaps = 29/345 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FS G V KVIR ++ Y FLEF+ A L
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQT 134
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + + ++NWA+ + + D S Y IFVGDL+ ++ L E F + +
Sbjct: 135 FNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSV 194
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
++V D T ++KGY FV F ++E A+T M G +R +R S + T+
Sbjct: 195 KGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTS 254
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ QN N++ P N T++ G ++ +E + +VF+ +G +V +++
Sbjct: 255 KASYQNPQGG------AQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSG 308
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
K FV+F + +A A+ ++ T + G V+ WG+ N T P+ Q N ++
Sbjct: 309 KRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPN-----QWNGSS 363
Query: 302 PQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYV 346
Y GY + AY A Q P YG YP GY
Sbjct: 364 ---SYFGGYAQGY---ENYAYAPPAGQDPN---MYGS--YPAGYA 397
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L V++ L +F ++ VKG KV+ R G Y F+ F +
Sbjct: 162 DDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESE 221
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP---------------GNQPKQDTSNHYHIFVGDL 103
A+ M + + M++ AS+ G ++ N+ IFVG+L
Sbjct: 222 QMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNL 281
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + + LK+ F +GE+ + +I K FV F ++ AE A+ +NG LG
Sbjct: 282 DPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLNGTLLG 335
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 336 GQNVRLSWG-RSP 347
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
+E+ P TT++VGNLD +VT+E L +F+Q G + K+ P F++F + A
Sbjct: 267 NENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKI---PSGKRCGFVQFADRSSAE 323
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + + ++++W SP N+ Q N ++
Sbjct: 324 EALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWN 360
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 156/345 (45%), Gaps = 29/345 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L FS G V KVIR ++ Y FLEF+ A L
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQT 134
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + + ++NWA+ + + D S Y IFVGDL+ ++ L E F + +
Sbjct: 135 FNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSV 194
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
++V D T ++KGY FV F ++E A+T M G +R +R S + T+
Sbjct: 195 KGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTS 254
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ QN N++ P N T++ G ++ +E + +VF+ +G +V +++
Sbjct: 255 KASYQNPQGG------AQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSG 308
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTA 301
K FV+F + +A A+ ++ T + G V+ WG+ N T P+ Q N ++
Sbjct: 309 KRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPN-----QWNGSS 363
Query: 302 PQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYV 346
Y GY + AY A Q P YG YP GY
Sbjct: 364 ---SYFGGYAQGY---ENYAYAPPAGQDPN---MYGS--YPAGYA 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L V++ L +F ++ VKG KV+ R G Y F+ F +
Sbjct: 162 DDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESE 221
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP---------------GNQPKQDTSNHYHIFVGDL 103
A+ M + + M++ AS+ G ++ N+ IFVG+L
Sbjct: 222 QMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNL 281
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + + LK+ F +GE+ + +I K FV F ++ AE A+ +NG LG
Sbjct: 282 DPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLNGTLLG 335
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 336 GQNVRLSWG-RSP 347
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
+E+ P TT++VGNLD +VT+E L +F+Q G + K+ P F++F + A
Sbjct: 267 NENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKI---PSGKRCGFVQFADRSSAE 323
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + + ++++W SP N+ Q N ++
Sbjct: 324 EALRVLNGTLLGGQNVRLSWGRSPANKQTQQDPNQWN 360
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 9 TLYVGNLDVSVTEELL-----CALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
TL++G+L + E L + QI VK + + ++ Y F+EF A L
Sbjct: 147 TLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEHTL 206
Query: 64 AAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N ++ +E K+NWAS+ + D + + IFVGDL+P++ L++ F A +
Sbjct: 207 MNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRANYP 266
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T + KGY FV F E A+T MNG L +R +R + K
Sbjct: 267 SVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNTDA 326
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ N ++ + +++ P N TV+ GG +++EE + ++F+P+G I +++
Sbjct: 327 QQTYATNGAYQSSQGN--CSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 384
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
K FV+FT++ A AI+ ++ + I G + WG+ ++N
Sbjct: 385 GKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQN 426
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 2 CDESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVA 59
C E+ P TT++VG LD +V EE L +F+ G + K+ P F++F + A
Sbjct: 343 CSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI---PVGKHCGFVQFTSRSCA 399
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQ--PKQDTSNHYH 97
A+ +N ++ +++W S N+ + D ++ Y+
Sbjct: 400 EEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYN 439
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 9 TLYVGNLDVSVTEELL-----CALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
TL++G+L + E L + QI VK + + ++ Y F+EF A L
Sbjct: 116 TLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEHTL 175
Query: 64 AAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N ++ +E K+NWAS+ + D + + IFVGDL+P++ L++ F A +
Sbjct: 176 MNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRANYP 235
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T + KGY FV F E A+T MNG L +R +R + K
Sbjct: 236 SVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNTDA 295
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ N ++ + +++ P N TV+ GG +++EE + ++F+P+G I +++
Sbjct: 296 QQTYATNGAYQSSQGN--CSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 353
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
K FV+FT++ A AI+ ++ + I G + WG+ ++N
Sbjct: 354 GKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQN 395
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 2 CDESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVA 59
C E+ P TT++VG LD +V EE L +F+ G + K+ P F++F + A
Sbjct: 312 CSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKI---PVGKHCGFVQFTSRSCA 368
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQ--PKQDTSNHYH 97
A+ +N ++ +++W S N+ + D ++ Y+
Sbjct: 369 EEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYN 408
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 40/354 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + FSQ G + KVIR + Y F+EF+ H A L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS G+ K D + IFVGDL+P++ L+E F + +
Sbjct: 85 YNGTQMPGTELTFRLNWASF-GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSV 143
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F +++E A+ MNG + +R +R + +T K N
Sbjct: 144 RGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPK----KNV 199
Query: 183 RKRQNSHTKTITFDEVYN-------------QSSPTNCTVYCGGFGKDLNEELVSKVFSP 229
+Q TK + V + +S T T+ +++ EE + K FS
Sbjct: 200 GVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQ 259
Query: 230 FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
G ++ +++ KGY +V+F T+ +A A++ + I V+ W K + + Q
Sbjct: 260 LGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQA 319
Query: 290 SAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQ 343
PN +N GY AY A Q P Y YG GYPQ
Sbjct: 320 D------PNQ--------WNGYYGY-GQGYDAYAYGATQDP-SVYAYGGYGYPQ 357
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ V NLD +VTEE L FSQ+G V K+ P Y +++F A A+ M
Sbjct: 237 TTISVANLDQNVTEEELKKAFSQLGEVIYVKI---PATKGYGYVQFKTRPSAEEAVQRMQ 293
Query: 68 KRVFLEKEMKVNWASSPG 85
+V ++ ++++W+ +PG
Sbjct: 294 GQVIGQQAVRISWSKNPG 311
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 162/334 (48%), Gaps = 27/334 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+L++G+L + E L + F Q + KVIR ++ Y F+EF H A AL +
Sbjct: 18 SLWIGDLQYWMDESYLKSCFPQ-STIVSTKVIRNKITGHHEGYGFVEFESHAAAEKALQS 76
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V E+ ++NWA G+ K+D+ IFVGDL+ ++ L E F + + +
Sbjct: 77 FTGAVMPRTEQAFRLNWACVGGD--KRDSGADDSIFVGDLAADVTDAMLLETFKSRYPSV 134
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ ++V D + + +GY FV F +AE +A+T M+G + SR +R +T K
Sbjct: 135 KSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATPK------- 187
Query: 183 RKRQNSHTKTITFDEV--YNQSSP------TNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
++ Q + +++ V Y +P TN T++ GG ++++ + + VFSP+G I
Sbjct: 188 KQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIK 247
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTT 294
++ +G FV+F T+ +A A++ +H + I TV+ WG+ N L+ + P
Sbjct: 248 YTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQRLSSSALPWY 307
Query: 295 PQPNSTAPQFPYIYNQQM---GYWYPQAAAYTAT 325
P + Y YN Y YPQ A T
Sbjct: 308 QPPFDSQWNAFYPYNHSQAPYAYLYPQDPALVYT 341
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D+ TT++VG LD +V+ + L +FS G +K K+ P F++F+ A A
Sbjct: 215 DDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKI---PPGRGCGFVQFMTRASAEEA 271
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTS 93
L ++ V ++ ++++W P N+ + +S
Sbjct: 272 LKQVHGSVIGQQTVRLSWGRHPANKQRLSSS 302
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQI-GPVKGCKVIREPGND--PYAFLEFVHHTVAATALAAM 66
LYVGNL S +EE + +FS + P+K K++ + YAF+EF A AL ++
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 67 NKRVFLEKEMKVNWAS-----SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
N + ++KVNWA + G+ P++ + Y+IFVGDLS E+ + LK+AF FG
Sbjct: 162 NGKDVNGSDIKVNWAYQSAAIAGGSTPEEPS---YNIFVGDLSSEVNDEALKKAFTKFGS 218
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT +S+GY FV+F K+ +AENA+ +MNG+WLG R+IR NW++ K
Sbjct: 219 LKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWASHK 272
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGE-ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA 156
++VG+L+ + + E F+ I + +++ D L YAF+ F + +AE A+ +
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFN-YAFIEFNESEDAEKALNS 160
Query: 157 MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGK 216
+NG+ + I+ NW+ + + S+ ++ G
Sbjct: 161 LNGKDVNGSDIKVNWAYQSAAIAGGSTPEEPSYN------------------IFVGDLSS 202
Query: 217 DLNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
++N+E + K F+ FG++ D++ + +GY FV F +E A +A++S++ + G
Sbjct: 203 EVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGR 262
Query: 271 TVKCFW 276
++C W
Sbjct: 263 AIRCNW 268
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
T+D V Q+ TVY G + + FG IVD + E+G AFVK+ + E
Sbjct: 491 TYDIVLRQTPSWQTTVYIGNIAHFTQLHEMIPLLQSFGFIVDFKFHPERGCAFVKYDSHE 550
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ++NG +KC WGKE
Sbjct: 551 RAALAIIQLAGFNLNGRPLKCGWGKE 576
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 167 IRTNWSTRKPPAMT--------NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDL 218
I TN ++ PP+ T +E + ++ + V +N +Y G K
Sbjct: 52 ISTNSPSQDPPSSTGSCPSPKESETQLESEESTVAPASAVNGGREISNKILYVGNLAKSA 111
Query: 219 NEELVSKVFSPFGT-IVDIRVFKEKG-----YAFVKFTTKETATHAIESIHNTDINGHTV 272
+EE ++++FS I I++ +K YAF++F E A A+ S++ D+NG +
Sbjct: 112 SEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSLNGKDVNGSDI 171
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPN 298
K W +S + +A S P P N
Sbjct: 172 KVNWAYQS---AAIAGGSTPEEPSYN 194
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L + FS G V KVIR ++ Y F+EF+ A L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ V ++ ++NWAS S G + + +FVGDLSP++ L E F+ +
Sbjct: 169 YSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPS 228
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + ++V D T +SKGY FV F + E A+T MNG + +R +R +T P
Sbjct: 229 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT--PKRAIA 286
Query: 182 ERKRQNSHTKTITFDEVYNQS---------SPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+++ +S + N S TN T++ GG D+ +E + + FS FG
Sbjct: 287 NQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGE 346
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F +++A AIES++ T I +TV+ WG+
Sbjct: 347 VVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGR 392
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES T++VG +D V +E L FSQ G V K+ P F++F A A+
Sbjct: 317 ESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI---PVGKGCGFVQFADRKSAEDAI 373
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
++N V + ++++W SP Q
Sbjct: 374 ESLNGTVIGKNTVRLSWGRSPNKQ 397
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 18/286 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L + FS G V KVIR ++ Y F+EF+ A L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQN 168
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGE 121
+ + ++ ++NWAS S G + + IFVGDLSP++ L E F +
Sbjct: 169 YSGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDALLHETFFDRYPS 228
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + ++V D T +SKGY FV F + E A+T MNG + +R +R +T P
Sbjct: 229 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVAT--PKRAIA 286
Query: 182 ERKRQNSHTKTITFDEVYNQS---------SPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+++ +S + N S TN T++ GG D+ +E + + FS FG
Sbjct: 287 NQQQHSSQALILAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFSQFGE 346
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F +++A AIE+++ T I +TV+ WG+
Sbjct: 347 VVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTVIGKNTVRLSWGR 392
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
ES T++VG +D VT+E L FSQ G V K+ P F++F A A+
Sbjct: 317 ESTNATIFVGGIDADVTDEDLRQPFSQFGEVVSVKI---PVGKGCGFVQFAERKSAEDAI 373
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
+N V + ++++W SP Q + D+ +
Sbjct: 374 ETLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQW 406
>gi|168229272|ref|NP_001094949.1| poly(A) binding protein, cytoplasmic 4-like [Mus musculus]
gi|148703238|gb|EDL35185.1| mCG12357 [Mus musculus]
Length = 370
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 46/346 (13%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE++L FS +GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVNDAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN V K +++ W+ + N +F+ +L I+ +TL E F+PFG I
Sbjct: 68 LVTMNFDVIKGKSIRLMWSQRDACLRRSGVGN---VFIKNLDKSIDNKTLYEHFSPFGTI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI-RTNWSTRKPPAMTN 181
+ +++ D + SKGY FV + + A+ AI MNG+ L ++ + +RK
Sbjct: 125 MSSKVMTDGEG--SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDR---- 178
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCT-VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
E + PT T VY FG D+++E + +VFS +G + ++V K
Sbjct: 179 ---------------EAELRDKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMK 223
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
+ KG+ FV F + E A +A+E ++ DING T+ F G+ AQ
Sbjct: 224 DATGKSKGFGFVSFDSHEAAKNAVEDMNGQDINGQTI--FVGR--------AQKKVERQA 273
Query: 296 QPNSTAPQFP--YIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
+ Q I +Q Y + T L ++F +G +
Sbjct: 274 ELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSI 319
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 36/258 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-PGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ Y F+ + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGTIMSSKVMTDGEGSKGYGFVHYQDRRAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ E + V S ++ + + ++++ + +++ + L+E F+ +G+ +
Sbjct: 160 KLLRESTLFVARFKSRKDREAELRDKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSV 219
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA------- 178
++++D T KSKG+ FVSF A+NA+ MNGQ + ++I + +K
Sbjct: 220 KVMKDA-TGKSKGFGFVSFDSHEAAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEM 278
Query: 179 ---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
M ER R K +Y +++E + K FS FG+I
Sbjct: 279 FEQMKKERIRARQAAK-----------------LYIKNLDDTIDDETLRKEFSVFGSICR 321
Query: 236 IRVFKE----KGYAFVKF 249
++V +E KG+ + F
Sbjct: 322 VKVMQEAGQSKGFGLICF 339
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N V +E L +FS+ G KV+++ + + F+ F H A A+
Sbjct: 190 TNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSHEAAKNAVED 249
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
MN K+V + E+K + + + +++ +L I+ +
Sbjct: 250 MNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIR--ARQAAKLYIKNLDDTIDDE 307
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
TL++ F+ FG I CR+ + +SKG+ + F A A+ MNG+ LGS+
Sbjct: 308 TLRKEFSVFGSI--CRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSK 360
>gi|4680498|gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 75/294 (25%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ + VT+ LL +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 205 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKE-KSSFGFVDYYDRRSAAIA 263
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + + +V W
Sbjct: 264 IVSLNGR---QLDARVMW------------------------------------------ 278
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
D +T +S+G+ FVSF + +A+NAI +NG+WLG+R +R NW+T+ A
Sbjct: 279 -------DQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANA---G 328
Query: 183 RKRQNSHTKTITFDEVYNQSS---------------PTNCTVYCGGFGKDLNEELVSKVF 227
++QN+ +K + E+ N SS P TVY G D+N V + F
Sbjct: 329 EEKQNTDSKGMI--ELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFF 386
Query: 228 SPF--GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
G+I ++RV ++KG+ FV+++T E A AI++ + I G +KC WG +
Sbjct: 387 HSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSK 440
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQ--IGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
Q TT+YVGNL V + F +G ++ +V R+ G + F+ + H AA A+
Sbjct: 364 QYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKG---FGFVRYSTHEEAALAI 420
Query: 64 AAMNKRVFLEKEMKVNWASSP 84
N ++ +++K +W S P
Sbjct: 421 QTGNGQLIGGRQIKCSWGSKP 441
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 146/326 (44%), Gaps = 44/326 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L LF+ G V KVIR + Y F+EF H A L A
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + + D IFVGDL+P++ L E F F +
Sbjct: 89 YNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSV 148
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP------ 176
++V D T +SKGY FV F + E A++ MNG + SR +R + +T K
Sbjct: 149 RGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAAGL 208
Query: 177 -----------PAMTNERKRQNSHTKTITFDEVYN----------------QSSPTNCTV 209
P + + K + T Y+ S PTN T+
Sbjct: 209 TTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTNTTI 268
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+ GG ++ EE V + FS G +V +++ KG AFV++ + +A A++ +H T I
Sbjct: 269 FVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQ 328
Query: 270 HTVKCFWGKESENNSTLAQPSAPTTP 295
++ WG+ S + APT+P
Sbjct: 329 QAIRLSWGR-----SPTSTKQAPTSP 349
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD+++TEE + FSQIG + K+ P AF+++ A AL ++
Sbjct: 266 TTIFVGGLDLNITEEEVKQTFSQIGELVSVKI---PPGKGCAFVQYAQRNSAEDALQRLH 322
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
V ++ ++++W SP + + TS
Sbjct: 323 GTVIGQQAIRLSWGRSPTSTKQAPTS 348
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 33/336 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + + F+ G V KVIR + Y F+EF H A L
Sbjct: 90 TLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERILQT 149
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS G + DT + + IFVGDL+ ++ L++ F + +
Sbjct: 150 YNGTPMPNGEQNFRLNWASFSGGDKRDDTPD-FTIFVGDLAADVTDYILQDTFRVHYPSV 208
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A+T MNG + +R +R +T K A+T +
Sbjct: 209 KGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKN-AVTGQ 267
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ + S+ + T E N++ P N T++ G ++ ++ + ++F +G ++ +++ K
Sbjct: 268 QYPKASYQNSQTQGE--NENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGK 325
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAP 302
FV+F + A A+ ++ T ++G +++ WG+ N PQP++
Sbjct: 326 RCGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPSNKQ----------PQPDA--- 372
Query: 303 QFPYIYNQQMGYWYPQAAAYT----ATAAQLPQQFY 334
NQ +Y A Y A A Q P +Y
Sbjct: 373 ------NQWNAGYYGYAQGYENYGYAPAPQDPNMYY 402
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGN-DPYAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 176 DDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESE 235
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP----GNQ-PK------------QDTSNHYHIFVG 101
A+ MN + M++ A++ G Q PK ++ N+ IFVG
Sbjct: 236 QVRAMTDMNGAFCSTRPMRIGLATNKNAVTGQQYPKASYQNSQTQGENENDPNNTTIFVG 295
Query: 102 DLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW 161
+L + L+E F +G++ + +I K FV F ++ AE A+ +NG
Sbjct: 296 NLDSNVTDDNLRELFGRYGQLLHVKIP------AGKRCGFVQFADRSCAEEALRLLNGTS 349
Query: 162 LGSRSIRTNWSTRKP 176
L +SIR +W R P
Sbjct: 350 LSGQSIRLSWG-RSP 363
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 18/291 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L FSQ G V KVIR + Y F+E A L
Sbjct: 91 SLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQT 150
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + E+ ++NWA+ + + D + Y IFVGDL+ ++ L+E F + +
Sbjct: 151 YNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSV 210
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+ MNG + +R +R + K P +
Sbjct: 211 KGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQQ 270
Query: 183 RKR---QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
++ QN+ +S P N T++ GG ++ ++ + +VFS +G +V +++
Sbjct: 271 FQKASFQNTQGNQ-------GESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIP 323
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F + A A+ ++ T + +++ WG+ N AQP
Sbjct: 324 VGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQ--AQPD 372
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHT 57
D++ T++VG+L VT+ +L F P VKG KV+ R G Y F+ F
Sbjct: 177 ADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEG 236
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSP-----------------GNQPKQDTSNHYHIFV 100
A+ MN + M++ A++ GNQ + D N+ IFV
Sbjct: 237 EQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQQFQKASFQNTQGNQGESD-PNNTTIFV 295
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
G L + L++ F+ +GE+ + +I K FV F +A AE A+ +NG
Sbjct: 296 GGLDSNVTDDYLRQVFSQYGELVHVKIP------VGKRCGFVQFANRACAEQALAGLNGT 349
Query: 161 WLGSRSIRTNWSTRKP 176
LG++SIR +W R P
Sbjct: 350 QLGAQSIRLSWG-RSP 364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 ESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES P TT++VG LD +VT++ L +FSQ G + K+ P F++F + A
Sbjct: 285 ESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI---PVGKRCGFVQFANRACAEQ 341
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
ALA +N + ++++W SP N+ Q
Sbjct: 342 ALAGLNGTQLGAQSIRLSWGRSPSNKQAQ 370
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 168/378 (44%), Gaps = 36/378 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F G V K+IR + Y F+EFV H A L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWAS + + D + + IFVGDL+P++ L+E F A + +
Sbjct: 75 YNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSV 134
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 135 RGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAAT---PKKTTG 191
Query: 183 RKRQNSHTKTITFDEVYNQSSPT-----------NCTVYCGGFGKDLNEELVSKVFSPFG 231
+ V +SP N T++ G +++EE + + FG
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
IV +++ KG+ FV+F T+ +A AI+ + I V+ WG+ + A+
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGR-----TLTARQDL 306
Query: 292 PTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGR 351
P P Q+ Y GY AY A P Y YG YP GY +
Sbjct: 307 PGGWGPQMDPNQWSAYYGYGQGY-----EAYAYGPAHDP-SLYAYG--AYP-GYA-QYPQ 356
Query: 352 QVPGWQGIPG-AQPTAQQ 368
QV G Q + G + PT +Q
Sbjct: 357 QVEGAQDLSGMSVPTMEQ 374
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD++V+EE L Q G + K+ +PG + F++F A A+ M
Sbjct: 227 TTIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKG-FGFVQFGTRASAEEAIQKMQ 283
Query: 68 KRVFLEKEMKVNWASS-------PGNQPKQDTSNHYHIFVG 101
++ ++ ++++W + PG Q N + + G
Sbjct: 284 GKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSAYYG 324
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 144/303 (47%), Gaps = 14/303 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVK-GCKVIREPGN---DPYAFLEFVHHTVAATALA 64
TL+VG+L + E L FS G V K+IR + Y F+E A L
Sbjct: 52 TLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAERILQ 111
Query: 65 AMNKRVFLEKE--MKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGE 121
++ ++NWA+ + + Y IFVGDL PE+ L+E F + +
Sbjct: 112 TLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETFQSRYSS 171
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ + ++V D T ++KGY FV F + E A+T MNG + SR +R N +T K
Sbjct: 172 VKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPKKSLGLQ 231
Query: 182 ER--KRQNSHTKT----ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
+ + N +T+ + + + P N T++ GG + +E + +VF PFG IV
Sbjct: 232 QSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNTTIFVGGLDPNATDEDLRQVFGPFGEIVY 291
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
+++ KG FV+FT + +A A++ +H T I +++ WG+ N T + P P
Sbjct: 292 VKIPVGKGCGFVQFTNRSSAEEALQKLHGTIIGQQSIRLSWGRSPANKQTASWGVQP-QP 350
Query: 296 QPN 298
PN
Sbjct: 351 DPN 353
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD + T+E L +F G + K+ P F++F + + A AL ++
Sbjct: 263 TTIFVGGLDPNATDEDLRQVFGPFGEIVYVKI---PVGKGCGFVQFTNRSSAEEALQKLH 319
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
+ ++ ++++W SP N+
Sbjct: 320 GTIIGQQSIRLSWGRSPANK 339
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 14/289 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL++G+L + E + F+ G V KVIR ++ Y F+EF+ A L
Sbjct: 67 TLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQT 126
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + ++NWAS+ + +QD S Y IFVGDL+ ++ L+E F A + +
Sbjct: 127 YNGTAMPNGAQNFRLNWASA--GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSV 184
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A+T MNG SR +R P A N
Sbjct: 185 KGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG-----PAANKNT 239
Query: 183 RKRQN-SHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
Q S T N++ P N T++ G ++ +E + +VF +G +V +++
Sbjct: 240 SGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVG 299
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
K FV+F + A A+ ++ T I G ++ WG+ N A P+
Sbjct: 300 KRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPN 348
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVI--REPGN-DPYAFLEFVHHTV 58
D+S T++VG+L VT+ +L F ++ VKG KV+ R G Y F++F +
Sbjct: 152 DDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESE 211
Query: 59 AATALAAMNKRVFLEKEMKV----NWASSPGNQ------------PKQDTSNHYHIFVGD 102
A+ MN + M++ N +S G Q ++ N+ IFVG+
Sbjct: 212 QMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGN 271
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L + + L++ F +GE+ + +I K FV F + AE A+ +NG +
Sbjct: 272 LDANVTDEHLRQVFGQYGELVHVKIP------VGKRCGFVQFADRNCAEEALRVLNGTQI 325
Query: 163 GSRSIRTNW----STRKPPAMTNE 182
G ++IR +W S ++P A N+
Sbjct: 326 GGQNIRLSWGRSPSNKQPQADPNQ 349
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
+E+ P TT++VGNLD +VT+E L +F Q G + K+ P F++F A
Sbjct: 258 NENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKI---PVGKRCGFVQFADRNCAE 314
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + ++++W SP N+ Q N ++
Sbjct: 315 EALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN 351
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 18/297 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L + FSQ G + KVIR + Y F+EF+ H A L
Sbjct: 24 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 83
Query: 66 MNKRVFLEKEM--KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS G+ K D + IFVGDL+P++ L+E F + +
Sbjct: 84 YNGTQMPGTELTFRLNWASF-GSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSV 142
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F +++E A+ MNG + +R +R + +T K +
Sbjct: 143 RGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQ 202
Query: 183 RKRQNSHTKTITFDEVYN-----------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+ + V +S T T+ ++ EE + K FS G
Sbjct: 203 QYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQLG 262
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
I+ +++ KGY +V+F T+ +A A++ + I V+ W K + +AQ
Sbjct: 263 EIIYVKIPATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRISWSKNPGQDGWVAQ 319
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ + NLD +VTEE L FSQ+G + K+ P Y +++F A A+ M
Sbjct: 238 TTISIANLDPNVTEEELKKAFSQLGEIIYVKI---PATKGYGYVQFKTRPSAEEAVQKMQ 294
Query: 68 KRVFLEKEMKVNWASSPG 85
+V ++ ++++W+ +PG
Sbjct: 295 GQVIGQQAVRISWSKNPG 312
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR ++ Y F+EF H A L
Sbjct: 20 TIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEG 79
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ ++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + +
Sbjct: 80 FAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSV 139
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E +A+T MNG + +R +R +T
Sbjct: 140 KGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPAT--------- 190
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R+ S T T + TN TV+ GG +++E+ + + FS +G I +++ K
Sbjct: 191 -PRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGK 249
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F ++ A A++ ++ + I TV+ WG+ N
Sbjct: 250 QCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPAN 289
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+E+ L FSQ G + K+ P F++FV A AL +N
Sbjct: 214 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKI---PVGKQCGFVQFVQRKNAEDALQGLN 270
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ ++++W +P N Q + D + ++
Sbjct: 271 GSTIGKQTVRLSWGRNPANKQLRSDNGSQWN 301
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 18/289 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP--YAFLEFVHHTVAATALAA 65
TL++G+L E L F+ G V+ K+IR + N P Y F+EF+ H A L
Sbjct: 18 TLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVLQT 77
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E ++NWAS + + D + IFVGDL+P++ L+E F + +
Sbjct: 78 YNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYSSV 137
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A++ MNG + +R +R + + P ++
Sbjct: 138 RGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAI---PKKSSG 194
Query: 183 RKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+ Q K + Y S TN T++ G + EE + ++ FG +
Sbjct: 195 SQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEEELRQLCVQFGEL 254
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ +++ KG FV++ ++ +A A++ +H T I V+ WG+ N
Sbjct: 255 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPAN 303
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+++GNLD + TEE L L Q G + K+ P F+++ A A+ ++
Sbjct: 228 TTIFIGNLDPNATEEELRQLCVQFGELIYVKI---PVGKGCGFVQYASRASAEEAVQRLH 284
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTS 93
+ ++ ++++W SP N KQD S
Sbjct: 285 GTMIGQQVVRLSWGRSPAN--KQDQS 308
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 14/290 (4%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATA 62
+ T++VG+L + E L FS G V K+IR + Y F+EF A
Sbjct: 63 EAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKV 122
Query: 63 LAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PF 119
L + + + E+ ++NWAS G + + D + IFVGDL+ ++ L+E FA +
Sbjct: 123 LQSYSGSMMPNTEQPFRLNWASFAGER-RADPGSDLSIFVGDLAADVTDSMLQETFAGKY 181
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPA 178
+ ++V D T +SKGY FV F + E A+ MNG + SR +R +T +KP A
Sbjct: 182 PSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPKKPSA 241
Query: 179 MTNERKRQ-----NSHTKTITFDE-VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ Q H + + N T++ GG D+ +E + + FS FG
Sbjct: 242 YQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQFGE 301
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+V +++ KG AFV+F ++ A A++S++ T I TV+ WG+ N
Sbjct: 302 VVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPAN 351
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPG---NDPYAFLEFVHHT 57
D +++VG+L VT+ +L F+ P VKG KV+ + + Y F+ F
Sbjct: 151 ADPGSDLSIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDEN 210
Query: 58 VAATALAAMNKRVFLEKEMKV----------------------------NWASSPGNQPK 89
A+ MN + M++ N A + G+Q
Sbjct: 211 EKTRAMMEMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSD 270
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
D SN+ IFVG + ++ + L++ F+ FGE+ + +I KG AFV F +
Sbjct: 271 GD-SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIP------VGKGCAFVQFANRKN 323
Query: 150 AENAITAMNGQWLGSRSIRTNW 171
AE+A+ ++NG +G +++R +W
Sbjct: 324 AEDALQSLNGTTIGKQTVRLSW 345
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG +D VT+E L FSQ G V K+ P AF++F + A AL
Sbjct: 272 DSNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKI---PVGKGCAFVQFANRKNAEDAL 328
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++N ++ ++++W +P N Q + D N +H
Sbjct: 329 QSLNGTTIGKQTVRLSWGRTPANKQWRGDHGNQWH 363
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E + F+Q G + K+IR ++ Y F+EF H A L N + +E
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVE 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRDPQ 132
+ ++NWA + + + ++ Y IFVGDL+P++ TL+E F + + ++V D
Sbjct: 61 QNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRL 120
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T +SKGY FV F ++E A++ MNG R++R + K + N T
Sbjct: 121 TSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGGTASYQNNQGTP- 179
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
N S P+N T++ G ++ +E + + FSP+G +V +++ K FV+FT +
Sbjct: 180 -------NDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNR 232
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESEN 282
+A A+ ++ + G V+ WG+ N
Sbjct: 233 SSAEEALRVLNGMQLGGRNVRLSWGRSPNN 262
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 3 DESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA 60
++S P TT++VGNLD +VT+E L FS G + K+ P F++F + + A
Sbjct: 180 NDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKI---PAGKQCGFVQFTNRSSAE 236
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
AL +N + ++++W SP N+ Q N ++
Sbjct: 237 EALRVLNGMQLGGRNVRLSWGRSPNNRQSQPDQNQWN 273
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 108/173 (62%), Gaps = 11/173 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAAM 66
LYVG L SV++E+L LF+ G ++ K++ + PG + YAF+EF + A AL +
Sbjct: 100 LYVGGLHKSVSDEMLKDLFAVAGAIQSVKILNDKNRPGFN-YAFIEFENTQSADMALHTL 158
Query: 67 NKRVFLEKEMKVNWASSPGN----QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
N R+ E+K+NWA P + T ++IFVGDLSPE++ +TL ++F+ F +
Sbjct: 159 NGRIINNSEIKINWAYQSSTISSLNPDEPT---FNIFVGDLSPEVDDETLNKSFSKFPSL 215
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FVSF ++A+AE A+ MNG+W+ R+IR NW++ K
Sbjct: 216 KQAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRAIRCNWASHK 268
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 26/190 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L + + LK+ FA G I + +I+ D + YAF+ F A+ A+ +
Sbjct: 100 LYVGGLHKSVSDEMLKDLFAVAGAIQSVKILND-KNRPGFNYAFIEFENTQSADMALHTL 158
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + I+ NW+ Q+S ++ DE PT ++ G +
Sbjct: 159 NGRIINNSEIKINWAY------------QSSTISSLNPDE------PT-FNIFVGDLSPE 199
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E ++K FS F ++ D++ + +GY FV F + A A+++++ I+G
Sbjct: 200 VDDETLNKSFSKFPSLKQAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRA 259
Query: 272 VKCFWGKESE 281
++C W +
Sbjct: 260 IRCNWASHKQ 269
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
++D V Q+ TVY G + + + FG IVD + E+G AFVK+ + E
Sbjct: 353 SYDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFKFHPERGCAFVKYDSHE 412
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ING +KC WGK+
Sbjct: 413 RAALAIVQLAGFTINGRPLKCGWGKD 438
>gi|448114345|ref|XP_004202551.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359383419|emb|CCE79335.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
T LYVG L SV+E++L LFS G VK K + + N P YAF+EF + A AL
Sbjct: 72 TILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDK-NRPGFSYAFVEFENSDSADLALR 130
Query: 65 AMNKRVFLEKEMKVNWA--SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+N R+ +K+NWA SS + Q ++IFVGDLSPE++ ++L +AF+ F +
Sbjct: 131 TLNGRMVNNSVIKINWAYQSSAVSTASQHEP-FFNIFVGDLSPEVDDESLHKAFSKFESL 189
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FVSF + +AE A+ MNG+W+G R+IR NW++ K
Sbjct: 190 RQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHK 242
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L + L++ F+ G + + + + D + YAFV F A+ A+ +
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLND-KNRPGFSYAFVEFENSDSADLALRTL 132
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + I+ NW+ Q+S T + E + ++ G +
Sbjct: 133 NGRMVNNSVIKINWAY------------QSSAVSTASQHEPF-------FNIFVGDLSPE 173
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + K FS F ++ D++ + +GY FV F + A A+++++ I G
Sbjct: 174 VDDESLHKAFSKFESLRQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRA 233
Query: 272 VKCFWGKESENNS 284
++C W + N+
Sbjct: 234 IRCNWASHKQFNN 246
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
+FD V Q+ TVY G + + + FG IVD + EKG AFV + + E
Sbjct: 312 SFDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFKFHPEKGCAFVNYDSHE 371
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ING +KC WGKE
Sbjct: 372 RAALAIVQLAGFTINGRPLKCGWGKE 397
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
+N +Y GG K ++E+++ +FS G + I+ +K YAFV+F ++A A+
Sbjct: 70 SNTILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKNRPGFSYAFVEFENSDSADLAL 129
Query: 260 ESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ +N +K W +S ST +Q
Sbjct: 130 RTLNGRMVNNSVIKINWAYQSSAVSTASQ 158
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 15/282 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E L ++FS G + KVIR + Y F+EFV A L
Sbjct: 70 SLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERILQT 129
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N E+ ++NWA+ + +QD + +FVGDL+ ++ L+E F + +
Sbjct: 130 YNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSV 189
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY F+ F + E A+ MNGQ+ +R +R + K P
Sbjct: 190 KGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLTQQY 249
Query: 183 RKR--QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+K QN ++ P N T++ G + ++ + VFS +G +V +++
Sbjct: 250 QKATYQNPQGNQ-------GENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPA 302
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
K FV+F + +A A+ ++ T I G ++ WG+ N
Sbjct: 303 GKRCGFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSN 344
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR ++ Y F+EF H A L
Sbjct: 116 TIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEG 175
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ ++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + +
Sbjct: 176 FAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSV 235
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E +A+T MNG + +R +R +T
Sbjct: 236 KGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPAT--------- 286
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R+ S T T + TN TV+ GG +++E+ + + FS +G I +++ K
Sbjct: 287 -PRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGK 345
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F ++ A A++ ++ + I TV+ WG+ N
Sbjct: 346 QCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPAN 385
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+E+ L FSQ G + K+ P F++FV A AL +N
Sbjct: 310 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKI---PVGKQCGFVQFVQRKNAEDALQGLN 366
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
++ ++++W +P N+
Sbjct: 367 GSTIGKQTVRLSWGRNPANK 386
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 162/350 (46%), Gaps = 35/350 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F+ G V K+IR + Y F+EFV H A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS D+ + IFVGDL+P++ L+E F A + +
Sbjct: 71 YNGAQMPGTEQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F +A+ A+T MNG + +R +R + +T K A
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNA---S 181
Query: 183 RKRQNSHTKTITFDEVYN--------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
+ Q + K + Y+ ++ N TV G ++ EE + + F FG IV
Sbjct: 182 FQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIV 241
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTT 294
++++ KGY +V+F T+ +A AI+ + I ++ WG +S A+ P
Sbjct: 242 LVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWG-----SSMTARQDVPGG 296
Query: 295 PQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL-GYPQ 343
Q+ Y GY +A AY AT Q P Y YG GY Q
Sbjct: 297 WGVQMDPSQWSAYYGYGQGY---EAYAYGAT--QDP-SIYTYGAYAGYAQ 340
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ +GNLD++VTEE L F Q G + K+ G Y +++F A A+ M
Sbjct: 214 TTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKG---YGYVQFGTRVSAEDAIQRMQ 270
Query: 68 KRVFLEKEMKVNWASS 83
+V ++ ++++W SS
Sbjct: 271 GKVIGQQVIQISWGSS 286
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 39/296 (13%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A A
Sbjct: 8 RMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTN 181
+ +++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 125 LSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA-- 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF- 239
E+ +++S TN VY FG D+++E + VFS +G + ++V
Sbjct: 181 ---------------ELRSKASEFTN--VYIKNFGGDMDDERLKDVFSKYGKTLSVKVMT 223
Query: 240 ----KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 224 DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 277
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
++ K KV + ++ S ++++ + +++ + LK+ F+ +G+
Sbjct: 160 KLL--KGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTL 217
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K
Sbjct: 218 SVKVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE------ 270
Query: 184 KRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
RQ + E + C +Y +++E + FS FG+I ++V +
Sbjct: 271 -RQAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ 326
Query: 241 E----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ + F++ E AT A+ T++NG +
Sbjct: 327 EEGQSKGFGLICFSSPEDATKAM-----TEMNGRIL 357
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 187 SEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 246
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 247 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 307 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 364
Query: 170 NWSTR 174
+ R
Sbjct: 365 ALAQR 369
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 39/296 (13%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A A
Sbjct: 8 RMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTN 181
+ +++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 125 LSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA-- 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF- 239
E+ +++S TN VY FG D+++E + VFS +G + ++V
Sbjct: 181 ---------------ELRSKASEFTN--VYIKNFGGDMDDERLKDVFSKYGKTLSVKVMT 223
Query: 240 ----KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 224 DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 277
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
++ K KV + ++ S ++++ + +++ + LK+ F+ +G+
Sbjct: 160 KLL--KGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTL 217
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K
Sbjct: 218 SVKVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE------ 270
Query: 184 KRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
RQ + E + C +Y +++E + FS FG+I ++V +
Sbjct: 271 -RQAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ 326
Query: 241 E----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ + F++ E AT A+ T++NG +
Sbjct: 327 EEGQSKGFGLICFSSPEDATKAM-----TEMNGRIL 357
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 187 SEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 246
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 247 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 307 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 364
Query: 170 NWSTR 174
+ R
Sbjct: 365 ALAQR 369
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 136/273 (49%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS GPV ++ R+ + YA++ F+H A AL
Sbjct: 288 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKALDT 347
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ + N +F+ +L I+ +TL E F+ FG I +
Sbjct: 348 MNFDVIQGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGRILSS 404
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + +R+ +
Sbjct: 405 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQD-------R 455
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+K F TN VY FG D+++E + VFS +G + ++V
Sbjct: 456 EAELRSKASEF---------TN--VYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSG 504
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F + E A A+E ++ DING +
Sbjct: 505 KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI 537
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 377 VFIKNLDKSIDNKTLYEHFSAFGRILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 436
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V S ++ + S ++++ + +++ + LK+ F+ +G+ +
Sbjct: 437 KLLQGCKVFVGRFKSRQDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSV 496
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K ER+
Sbjct: 497 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKV-----ERQA 550
Query: 186 QNSHTKTITFDEVYNQSSPTNCTV---YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ F+++ N+ C V Y +++E + K FS FG+I ++V +E
Sbjct: 551 ELKQM----FEQLKNER-IRGCQVVKLYVKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE 605
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E A A+ T++NG +
Sbjct: 606 GQSKGFGLICFSSPEDALKAM-----TEMNGRIL 634
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 464 SEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 523
Query: 63 LAAMNKR------VFLEKEMKVNWASSPGNQPKQDTSNH-------YHIFVGDLSPEIET 109
+ MN R +F+ + K + Q + N ++V +L I+
Sbjct: 524 VEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKNERIRGCQVVKLYVKNLDDTIDD 583
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 584 EKLRKEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDALKAMTEMNGRILGSKPLSI 641
Query: 170 NWSTR 174
+ R
Sbjct: 642 ALAQR 646
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 16/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F+ G + KVIR ++ Y F+EF H A L
Sbjct: 85 TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQG 144
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ ++ ++NWA+ + D IFVGDL+ ++ L E FA + +
Sbjct: 145 YAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSV 204
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+T MNG + SR +R +T P +
Sbjct: 205 KAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT--PRKSSGY 262
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+++ +SH ++ N T++ GG ++++E + + FS +G IV +++ K
Sbjct: 263 QQQYSSHVQS--------DGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK 314
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
G FV+F + A A++ ++ T I TV+ WG+ N A
Sbjct: 315 GCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRA 359
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 275 DSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEDAL 331
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
+N V ++ ++++W +P N Q + D N +
Sbjct: 332 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW 365
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 37/292 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A AL
Sbjct: 11 SLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 71 MNFDMIKGKSIRLMWSQRDACLRKSGIGN---VFIKNLDRSIDNKTLYEHFSAFGKILSS 127
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D Q SKGYAFV F ++ A+ AI MNG+ L + N + R
Sbjct: 128 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGR-------FKNRKDR 178
Query: 186 QNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ E+ N++S TN VY FG D+++E + +VFS +G + ++V
Sbjct: 179 EA---------ELRNKASEFTN--VYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSG 227
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F E A A+E ++ DING + F G K+ E + L Q
Sbjct: 228 KSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLI--FVGRAQKKVERQAELKQ 277
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 99 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMN 158
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
++ K+ KV + ++ S ++++ + +++ + L+E F+ +G+
Sbjct: 159 GKLL--KDCKVFVGRFKNRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSKYGKT 216
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ DP KSKG+ FVSF A+ A+ MNG+ + + I + +K
Sbjct: 217 LSVKVMTDPSG-KSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVE----- 270
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
RQ + + +Y +++E + K FS FG+I ++V +E
Sbjct: 271 --RQAELKQMFEQQKRERIRKCQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE 328
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 329 GQSKGFGLICFSSPEEATKAM-----TEMNGQIL 357
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ +P + F+ F +H A A
Sbjct: 187 SEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGFVSFDNHEAAQKA 246
Query: 63 LAAMN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI 107
+ MN K+V + E+K + + ++ +++ +L I
Sbjct: 247 VEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRK--CQGVKLYIKNLDDTI 304
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+ FG IS +++++ +SKG+ + F EA A+T MNGQ LGS+ +
Sbjct: 305 DDEKLRKEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEEATKAMTEMNGQILGSKPL 362
Query: 168 RTNWSTR 174
S +
Sbjct: 363 NIALSQK 369
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F+ G + KVIR ++ Y F+EF H A L
Sbjct: 85 TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQG 144
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ ++ ++NWA+ + D IFVGDL+ ++ L E FA + +
Sbjct: 145 YAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSV 204
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+T MNG + SR +R +T P +
Sbjct: 205 KAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT--PRKSSGY 262
Query: 183 RKRQNSHTKTITFD-EVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+++ +SH + V + N T++ GG ++++E + + FS +G IV +++
Sbjct: 263 QQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 322
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
KG FV+F + A A++ ++ T I TV+ WG+ N A
Sbjct: 323 KGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRA 368
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 284 DSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEDAL 340
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
+N V ++ ++++W +P N Q + D N +
Sbjct: 341 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW 374
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 22/305 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L F G V KVIR ++ Y F+EF H A L
Sbjct: 93 TIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEG 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ + ++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + +
Sbjct: 153 FSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSV 212
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E +A+T MNG + SR +R +T + + T+
Sbjct: 213 KGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSG 272
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ + TN TV+ GG D++EE + + FS +G I +++ K
Sbjct: 273 SNGSSARP---------DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGK 323
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN---NSTLAQPS----APTTP 295
FV+F ++ A A++ ++ + I V+ WG+ N +T+A S A TT
Sbjct: 324 QCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPANKQLGATMATCSGRTGACTTR 383
Query: 296 QPNST 300
+P ST
Sbjct: 384 RPRST 388
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F+ G V K+IR + Y F+EFV H A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWAS + P + IFVGDL+P++ L+E F A + +
Sbjct: 71 FNGAQMPGTDQTFRLNWASFGDSGPD------HSIFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------- 175
++V DP T +SKGY FV F +A+ A+T MNG + +R +R + +T K
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 176 ---PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
PP + + T+ + N N TV G ++ EE + + F FG
Sbjct: 185 QYAPPKAMYQFPAYTAPVSTVAPENDVN-----NTTVCIGNLDLNVTEEELKQAFVQFGD 239
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
IV ++++ KGY +V+F T+ +A AI+ + I ++ WG
Sbjct: 240 IVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWG 284
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ +GNLD++VTEE L F Q G + K+ G Y +++F A A+ M
Sbjct: 214 TTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKG---YGYVQFGTRASAEDAIQRMQ 270
Query: 68 KRVFLEKEMKVNWASS 83
+V ++ ++++W S+
Sbjct: 271 GKVIGQQVIQISWGST 286
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 15/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L F G V KVIR ++ Y F+EF H A L
Sbjct: 93 TIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEG 152
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ + ++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + +
Sbjct: 153 FSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSV 212
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E +A+T MNG + SR +R +T + + T+
Sbjct: 213 KGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSG 272
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ + TN TV+ GG D++EE + + FS +G I +++ K
Sbjct: 273 SNGSSARP---------DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGK 323
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F ++ A A++ ++ + I V+ WG+ N
Sbjct: 324 QCGFVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPAN 363
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
+L++G+L + E FSQ G V KVIR + Y F+E A L
Sbjct: 76 SLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQT 135
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + E+ ++NWA+ + + D + Y IFVGDL+ ++ L+E F + +
Sbjct: 136 YNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSV 195
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+ MNG + +R +R + K P +
Sbjct: 196 KGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGASF 255
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ Q +S P N T++ GG ++ ++ + +VFS +G +V +++ K
Sbjct: 256 QNTQGXQ----------GESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGK 305
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
FV+F + A A+ ++ T + +++ WG+ N AQP
Sbjct: 306 RCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQ--AQPD 351
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D++ T++VG+L VT+ +L F P VKG KV+ R G Y F+ F
Sbjct: 163 DDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGE 222
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP-----------GNQPKQDTSNHYHIFVGDLSPEI 107
A+ MN + M++ A++ G Q + D N+ IFVG L +
Sbjct: 223 QLRAMNEMNGMFCSTRPMRIGPAATKKPVGASFQNTQGXQGESD-PNNTTIFVGGLDSNV 281
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
L++ F+ +GE+ + +I K FV F +A AE A+ +NG LG++SI
Sbjct: 282 TDDYLRQVFSQYGELVHVKIP------VGKRCGFVQFANRACAEQALAGLNGTQLGAQSI 335
Query: 168 RTNWSTRKP 176
R +W R P
Sbjct: 336 RLSWG-RSP 343
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 ESQP--TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAAT 61
ES P TT++VG LD +VT++ L +FSQ G + K+ P F++F + A
Sbjct: 264 ESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKI---PVGKRCGFVQFANRACAEQ 320
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQ 90
ALA +N + ++++W SP N+ Q
Sbjct: 321 ALAGLNGTQLGAQSIRLSWGRSPSNKQAQ 349
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F+ G V K+IR + Y F+EFV H A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWAS + P + IFVGDL+P++ L+E F A + +
Sbjct: 71 FNGAQMPGTDQTFRLNWASFGDSGPD------HSIFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------- 175
++V DP T +SKGY FV F +A+ A+T MNG + +R +R + +T K
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 176 ---PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
PP + + T+ + N N TV G ++ EE + + F FG
Sbjct: 185 QYAPPKAMYQFPAYTAPVSTVAPENDVN-----NTTVCIGNLDLNVTEEELKQAFVQFGD 239
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
IV ++++ KGY +V+F T+ +A AI+ + I ++ WG
Sbjct: 240 IVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWG 284
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ +GNLD++VTEE L F Q G + K+ G Y +++F A A+ M
Sbjct: 214 TTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKG---YGYVQFGTRASAEDAIQRMQ 270
Query: 68 KRVFLEKEMKVNWASS 83
+V ++ ++++W S+
Sbjct: 271 GKVIGQQVIQISWGST 286
>gi|164656166|ref|XP_001729211.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
gi|159103101|gb|EDP41997.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
Length = 328
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCK-----VIREPGNDPYAFLEFVHHTVAATALA 64
L V N+ V TE L LF Q GP+ G + +++ YA+++++ A A+
Sbjct: 25 LLVRNISVHATERDLRVLFEQAGPIGGMEMMPPVLVQGQPKPTYAWIQYMRQASADMAIT 84
Query: 65 AMNKRVFLEKEMKVNWASSP--GNQP----------------------KQDTSNHYHIFV 100
+ + + + WA S G QP T+ Y +FV
Sbjct: 85 YLQGFMLAGLPLFLEWAGSQDVGTQPIAMPVPVVMPSITPEARNMQALHTPTTCLYSVFV 144
Query: 101 GDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
GDL PEI+ L + F+ F + + R++RD + S+GY FV + EA AI M+GQ
Sbjct: 145 GDLDPEIDDTILAQTFSGFPSMYDARVIRDLRNGHSRGYGFVRLRNEREAMEAIANMSGQ 204
Query: 161 WLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNE 220
W+GSR IR NW+ R +E +R + SS + T+Y G + N
Sbjct: 205 WVGSRIIRVNWAVRPSEPFPSETQRPAEPEPKVA------DSSSDSKTLYVGNLPDNANL 258
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNT--DINGHTVKCFWGK 278
+ +FS FG +++ ++F + YAFV F A A ++ + ++ G T+K W +
Sbjct: 259 PDIMNIFSSFGNVINAQMFPGRHYAFVTFQFSSDANKAWDASQSNPPNMAGQTLKVGWAR 318
Query: 279 ESENN 283
S N
Sbjct: 319 YSTRN 323
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+++VG+LD + + +L FS + +VIR+ N Y F+ + A A+A
Sbjct: 141 SVFVGDLDPEIDDTILAQTFSGFPSMYDARVIRDLRNGHSRGYGFVRLRNEREAMEAIAN 200
Query: 66 MNKRVFLEKEMKVNWASSPGN------------QPK--QDTSNHYHIFVGDLSPEIETQT 111
M+ + + ++VNWA P +PK +S+ ++VG+L
Sbjct: 201 MSGQWVGSRIIRVNWAVRPSEPFPSETQRPAEPEPKVADSSSDSKTLYVGNLPDNANLPD 260
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITA--MNGQWLGSRSIRT 169
+ F+ FG + N Q + YAFV+F ++A A A N + ++++
Sbjct: 261 IMNIFSSFGNVINA------QMFPGRHYAFVTFQFSSDANKAWDASQSNPPNMAGQTLKV 314
Query: 170 NW---STRKP 176
W STR P
Sbjct: 315 GWARYSTRNP 324
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
+++VG+L + E L + F G V KVIR ++ Y F+EF H A L
Sbjct: 104 SVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEG 163
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ + ++ ++NWAS + D+++ + IFVGDL+ ++ TL EAF+ + +
Sbjct: 164 FSGHIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSV 223
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E A+T MNG + SR +R +T + + T+
Sbjct: 224 KGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSG 283
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ + TN TV+ GG +++EE + + FS +G I +++ K
Sbjct: 284 SNGSAARSDGGDL---------TNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGK 334
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAP 302
FV+F ++ A A++ ++ + I V+ WG+ N Q Q N+
Sbjct: 335 QCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANK----QFRGDNGNQWNNGGM 390
Query: 303 QF--PYIYNQQMGYWYPQAAAY 322
+ P YN GY YP AA +
Sbjct: 391 YYAAPPFYN---GYGYPAAAPF 409
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 129 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 185
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 186 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA----- 238
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ +++S TN VY FG D+++E + VFS +G + ++V
Sbjct: 239 ------------ELRSKASEFTN--VYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSS 284
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 285 GKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 335
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S ++++ + +++ + LK+ F+ +G+ +
Sbjct: 218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSV 277
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 278 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 329
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 330 QAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 386
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 387 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 415
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 245 SEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 304
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 305 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 364
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 365 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Query: 170 NWSTR 174
+ R
Sbjct: 423 ALAQR 427
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 35/294 (11%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS GPV ++ R+ YA++ F+ T A A
Sbjct: 8 RMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSGFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D Q SKGYAFV F ++ A+ AI MNG+ L S + +
Sbjct: 125 LSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREAEL 182
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
R + + T +Y FG D+++E + VFS +G + ++V
Sbjct: 183 RSKASEFT-----------------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS 225
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 226 SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 277
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 132/280 (47%), Gaps = 33/280 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
++ K KV + ++ S +I++ + +++ + LK+ F+ +G+
Sbjct: 160 KLL--KSCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTL 217
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +
Sbjct: 218 SVKVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELK 276
Query: 184 KRQNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ F+++ + +Y +++E + FS FG+I+ ++V ++
Sbjct: 277 Q---------MFEQLKRERIRGYQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQ 327
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
KG+ F+ F++ E AT A+ ++NG CF G
Sbjct: 328 EGQSKGFGFICFSSLEDATKAM-----IEMNG----CFLG 358
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 187 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 246
Query: 63 LAAMNKR------VFLEK-EMKVNWASSPG---NQPKQDTSNHYH---IFVGDLSPEIET 109
+ MN R +F+ + + KV + Q K++ Y ++V +L I+
Sbjct: 247 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTIDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L+ F+ FG I ++++ Q +SKG+ F+ F +A A+ MNG +LGS+ I
Sbjct: 307 EKLRNEFSSFGSIIRVKVMQ--QEGQSKGFGFICFSSLEDATKAMIEMNGCFLGSKPI 362
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+ +G+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 97 TICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHATAEKVLQN 156
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ E+ ++NWA+ + D + IFVGDL+ ++ L+E FA + +
Sbjct: 157 YGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSV 216
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ ++V D T +SKGY FV F E A+T MNG + SR +R +T P ++
Sbjct: 217 KSAKVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAAT---PRKSSG 273
Query: 183 RKRQNSHTKTITFDEVY-NQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
++Q + + + + +N T++ GG ++ +E + + FS +G IV +++
Sbjct: 274 YQQQGGYGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVS 333
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
KG FV+F + A A++ ++ T I TV+ WG+ + A S+P
Sbjct: 334 KGCGFVQFANRNNAEEALQKLNGTVIGKQTVRLSWGRNPGHKQHRADFSSP 384
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREPG---NDPYAFLEFVHHTV 58
D + +++VG+L VT+ LL F S+ VK KV+ + + Y F+ F T
Sbjct: 184 DNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRFGDDTE 243
Query: 59 AATALAAMNKRVFLEKEMKV-------------------NWASSPGNQPKQDTSNHYHIF 99
A+ MN + M++ N ASS G Q D+SN IF
Sbjct: 244 RTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASSQGFQSDGDSSNA-TIF 302
Query: 100 VGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
VG L P + + LK+ F+ +GEI + +I SKG FV F + AE A+ +NG
Sbjct: 303 VGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VSKGCGFVQFANRNNAEEALQKLNG 356
Query: 160 QWLGSRSIRTNWSTRKP 176
+G +++R +W R P
Sbjct: 357 TVIGKQTVRLSWG-RNP 372
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S T++VG LD +VT+E L FSQ G + K+ P + F++F + A AL
Sbjct: 295 DSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKI---PVSKGCGFVQFANRNNAEEAL 351
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N V ++ ++++W +PG++
Sbjct: 352 QKLNGTVIGKQTVRLSWGRNPGHK 375
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 20/287 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F G V K+IR + Y F+EFV H A L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++NWAS + + D + + IFVGDL+P++ L+E F A + +
Sbjct: 75 YNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSV 134
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F + E A+T MNG + +R +R + +T P T
Sbjct: 135 RGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAAT---PKKTTG 191
Query: 183 RKRQNSHTKTITFDEVYNQSSPT-----------NCTVYCGGFGKDLNEELVSKVFSPFG 231
+ V +SP N T++ G +++EE + + FG
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
IV +++ KG+ FV+F T+ +A AI+ + I V+ WG+
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGR 298
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD++V+EE L Q G + K+ +PG + F++F A A+ M
Sbjct: 227 TTIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKG-FGFVQFGTRASAEEAIQKMQ 283
Query: 68 KRVFLEKEMKVNWASS 83
++ ++ ++++W +
Sbjct: 284 GKMIGQQVVRISWGRT 299
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 147/296 (49%), Gaps = 39/296 (13%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTN 181
+ +++ D Q S+GYAFV F + A+ AI MNG L R + RK
Sbjct: 125 LSSKVMSDDQG--SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA-- 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
E+ N+++ TN VY FG D+++E + +VFS +G + ++V +
Sbjct: 181 ---------------ELQNKANEFTN--VYIKNFGDDMDDERLKEVFSKYGKTLSVKVMR 223
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
+ KG+ FV F + E A A+E ++ DING + F G K++E + L Q
Sbjct: 224 DSSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLL--FVGRAQKKAERQAELKQ 277
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMN 158
Query: 68 KRVFLEKEMKVNWASSPGNQPK--QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + + V + ++ Q+ +N + ++++ + +++ + LKE F+ +G+ +
Sbjct: 159 GALLKDCRLFVGRFKNRKDREAELQNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RD KSKG+ FVSF A+ A+ MNG+ + + + + +K E K
Sbjct: 219 VKVMRDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKAERQA-ELK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ K F +Y + +++E + + FS FG+I ++V +E
Sbjct: 277 QMFEQLKRERF------RRCQGVKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGR 330
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 331 SKGFGLICFSSPEEATKAM-----TEMNGRIL 357
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS+ G KV+R+ + F+ F H A A+
Sbjct: 190 TNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFVSFDSHEAAKKAVEE 249
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN + +F+ E++ ++ + + +++ +L I+ + L
Sbjct: 250 MNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRRCQGVKLYIKNLDETIDDEKL 309
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ F+ FG IS +++++ +SKG+ + F EA A+T MNG+ LGS+
Sbjct: 310 RREFSSFGSISRVKVMQEEG--RSKGFGLICFSSPEEATKAMTEMNGRILGSK 360
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV++E G + + F A A+
Sbjct: 291 QGVKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFGLICFSSPEEATKAMT 350
Query: 65 AMNKRVFLEKEMKVNWASSP 84
MN R+ K + + A P
Sbjct: 351 EMNGRILGSKPLNIALAQKP 370
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR ++ Y F+EF H A L
Sbjct: 105 TIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDG 164
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ ++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + +
Sbjct: 165 FAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDATLLEIFSSRYSSV 224
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E +A+T MNG + +R +R +T
Sbjct: 225 KGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSTRPMRIGPAT--------- 275
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R++S T + TN TV+ GG +++E+ + + FS +G I +++ K
Sbjct: 276 -PRKSSGNSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGK 334
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F ++ A A++ ++ + I TV+ WG+ N
Sbjct: 335 QCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPAN 374
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L F G V KVIR ++ Y F+EF H A L
Sbjct: 154 TIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDG 213
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ ++ ++NWAS + D ++ + IFVGDL+ ++ L E F+ + +
Sbjct: 214 FAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYSSV 273
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E NA+T MNG + +R +R +T
Sbjct: 274 KGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPAT--------- 324
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R++S T T + TN TV+ GG +++E+ + + FS +G I +++ K
Sbjct: 325 -PRKSSGTSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGK 383
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
FV+F ++ A A++ ++ + I TV+ WG+ N
Sbjct: 384 QCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPAN 423
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 52 EFVHHTVAATALAAMNKRVFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
+F H V A+A L+ + V S +P QP Q+ + I+VGDL ++
Sbjct: 112 QFAPHFVPFHAVAPPPPP--LQPRVGVAMGSPAPAAQPGQEENKT--IWVGDLHYWMDEN 167
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL--GSRSIR 168
L F GE+ +++R+ QT +S+GY FV F A AE + G + + R
Sbjct: 168 YLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFR 227
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
NW++ +M + R S + +++ G D+N+ + + FS
Sbjct: 228 INWASF---SMGDRRSDIAS-----------------DHSIFVGDLASDVNDTALLETFS 267
Query: 229 P-------FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
++D + KGY FV+F T+A+ T++NG
Sbjct: 268 SRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAM-----TEMNG 310
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 68 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 127
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 128 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 184
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 185 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA----- 237
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ +++S TN +Y FG D+++E + VFS +G + ++V
Sbjct: 238 ------------ELRSKASEFTN--IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSS 283
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 284 GKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 334
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 157 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 216
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S +I++ + +++ + LK+ F+ +G+ +
Sbjct: 217 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSV 276
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 277 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 328
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 329 QAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 385
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 386 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 414
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L F+ G + + RI RD T +S GYA+V+F++ A+A+ A+ M
Sbjct: 69 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 128
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + +SIR WS R D +S N V+ K
Sbjct: 129 NFDIIKGKSIRLMWSQR---------------------DAYLRRSGIGN--VFIKNLDKS 165
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + + FS FG I+ +V + KGYAFV F + A AIE ++ + G K
Sbjct: 166 IDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKG--CK 223
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ + + S A +F IY + G
Sbjct: 224 VFVGR--------FKNRKDREAELRSKASEFTNIYIKNFG 255
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 244 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 303
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 304 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 363
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 364 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 421
Query: 170 NWSTR 174
+ R
Sbjct: 422 ALAQR 426
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 37/292 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS GPV ++ R+ YA++ F+ T A AL
Sbjct: 137 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDT 196
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 197 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSGFGKILSS 253
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D Q SKGYAFV F ++ A+ AI MNG+ L S + N + R
Sbjct: 254 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVG-------RFKNRKDR 304
Query: 186 QNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ E+ +++S TN +Y FG D+++E + VFS +G + ++V
Sbjct: 305 EA---------ELRSKASEFTN--IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRG 353
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 354 KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 403
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 127/260 (48%), Gaps = 20/260 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 226 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 285
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
R+ ++ V + ++ + S +I++ + +++ + LK+ F+ +G+ +
Sbjct: 286 RLLKSCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSV 345
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF A+ A+ MNG+ + + I + +K ++
Sbjct: 346 KVMTDSRG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQ- 403
Query: 186 QNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
F+++ + +Y +++E + FS FG+I+ ++V ++
Sbjct: 404 --------MFEQLKRERIRGYQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQEG 455
Query: 242 --KGYAFVKFTTKETATHAI 259
KG+ F+ F++ E AT A+
Sbjct: 456 QSKGFGFICFSSLEDATKAM 475
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + + F+ F H A A
Sbjct: 313 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFVSFDSHEAAKKA 372
Query: 63 LAAMNKR------VFLEK-EMKVNWASSPG---NQPKQDTSNHYH---IFVGDLSPEIET 109
+ MN R +F+ + + KV + Q K++ Y ++V +L I+
Sbjct: 373 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTIDD 432
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L+ F+ FG I ++++ Q +SKG+ F+ F +A A+ MNG++LGS+ I
Sbjct: 433 EKLRNEFSSFGSIIRVKVMQ--QEGQSKGFGFICFSSLEDATKAMIEMNGRFLGSKPI 488
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 129 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 185
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 186 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA----- 238
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ +++S TN +Y FG D+++E + VFS +G + ++V
Sbjct: 239 ------------ELRSKASEFTN--IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSS 284
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 285 GKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 335
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S +I++ + +++ + LK+ F+ +G+ +
Sbjct: 218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSV 277
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 278 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 329
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 330 QAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 386
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 387 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 415
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L F+ G + + RI RD T +S GYA+V+F++ A+A+ A+ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + +SIR WS R D +S N V+ K
Sbjct: 130 NFDIIKGKSIRLMWSQR---------------------DAYLRRSGIGN--VFIKNLDKS 166
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + + FS FG I+ +V + KGYAFV F + A AIE ++ + G K
Sbjct: 167 IDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKG--CK 224
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ + + S A +F IY + G
Sbjct: 225 VFVGR--------FKNRKDREAELRSKASEFTNIYIKNFG 256
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 245 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 304
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 305 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 364
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 365 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Query: 170 NWSTR 174
+ R
Sbjct: 423 ALAQR 427
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L ++FS G + K+IR + + Y F+EF H A L A
Sbjct: 21 TLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAERVLTA 80
Query: 66 MNKRVFLEKE--MKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ E ++NWA + + + IFVGDL+P++ L+E F + +
Sbjct: 81 FTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAPDVTDYMLQETFRTRYPSV 140
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E A++ MNG + SR +R N +T K + +
Sbjct: 141 RGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSSRPMRINAATPKKALIPSA 200
Query: 183 RKRQNSHT-KTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
Q T T V N + P N T++ GG ++EE + K F FG +V +++
Sbjct: 201 PAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEEELQKTFGEFGELVYVKIPPG 260
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG FV+FT + A A+ +H T I ++ WG+
Sbjct: 261 KGCGFVQFTHRSCAEEALGKLHGTMIRQQAIRLSWGR 297
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+EE L F + G + K+ P F++F H + A AL ++
Sbjct: 226 TTIFVGGLDPAVSEEELQKTFGEFGELVYVKI---PPGKGCGFVQFTHRSCAEEALGKLH 282
Query: 68 KRVFLEKEMKVNWASSPGNQ 87
+ ++ ++++W + Q
Sbjct: 283 GTMIRQQAIRLSWGRTANKQ 302
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
+++VG+L + E L + F G V KVIR ++ Y F+EF H A L
Sbjct: 107 SVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEG 166
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ + ++ ++NWAS + D ++ + IFVGDL+ ++ TL EAF+ + +
Sbjct: 167 FSGHIMPNTDQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSV 226
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E A+T MNG + SR +R +T + + T+
Sbjct: 227 KGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSG 286
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ + TN TV+ GG +++EE + + FS +G I +++ K
Sbjct: 287 SNGSAARSDGGDL---------TNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGK 337
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAP 302
FV+F ++ A A++ ++ + I V+ WG+ N Q Q N+
Sbjct: 338 QCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANK----QFRGDNGNQWNNGGM 393
Query: 303 QF--PYIYNQQMGYWYPQAAAY 322
+ P YN GY YP AA +
Sbjct: 394 YYAAPPFYN---GYGYPAAAPF 412
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 129 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 185
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 186 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA----- 238
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ +++S TN +Y FG D+++E + VFS +G + ++V
Sbjct: 239 ------------ELRSKASEFTN--IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSS 284
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 285 GKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 335
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S +I++ + +++ + LK+ F+ +G+ +
Sbjct: 218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSV 277
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 278 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 329
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 330 QAELKQMF---EQLKRERICGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 386
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 387 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 415
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 245 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 304
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 305 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNLDDTIDD 364
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 365 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Query: 170 NWSTR 174
+ R
Sbjct: 423 ALAQR 427
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 23/283 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L V E L F+ G V K+IR + Y F+EFV H A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS + P + IFVGDL+P++ L+E F A + +
Sbjct: 71 YNGAQMPGTEQTFRLNWASFGDSGPD------HSIFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V DP T +SKGY FV F +A+ A+T MNG + +R +R + +T K A
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNA---S 181
Query: 183 RKRQNSHTKTITFDEVYN--------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
+ Q + K + Y+ ++ N TV G ++ EE + + F FG IV
Sbjct: 182 FQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIV 241
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
++++ KGY +V+F T+ +A AI+ + I ++ WG
Sbjct: 242 LVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWG 284
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT+ +GNLD++VTEE L F Q G + K+ G Y +++F A A+ M
Sbjct: 214 TTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKG---YGYVQFGTRVSAEDAIQRMQ 270
Query: 68 KRVFLEKEMKVNWASS 83
+V ++ ++++W SS
Sbjct: 271 GKVIGQQVIQISWGSS 286
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 140/274 (51%), Gaps = 34/274 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+H A A
Sbjct: 8 RQASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDMIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLHKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTN 181
+ +++ D S+GYAFV F + A+ AI AMNG L G R + RK
Sbjct: 125 LSSKVMSDDAG--SRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKD----- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF- 239
RQ E+ N+++ TN VY FG D+++E + ++FS FG I+ ++V
Sbjct: 178 ---RQA---------ELQNKANEFTN--VYIKNFGDDMDDERLKEIFSHFGKILSVKVMT 223
Query: 240 ----KEKGYAFVKFTTKETATHAIESIHNTDING 269
+ KG+ FV F + E A A+E ++ D++G
Sbjct: 224 DSRGRSKGFGFVSFDSHEAAQRAVEIMNGKDLSG 257
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 143/291 (49%), Gaps = 29/291 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NL S+ + L FS G + KV+ + G+ YAF+ F T A A+ AMN
Sbjct: 99 NVFIKNLHKSIDNKTLYEHFSAFGKILSSKVMSDDAGSRGYAFVHFQSQTAADRAIEAMN 158
Query: 68 KRVFLEKEMKVN-WASSPGNQPK-QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + V + + Q + Q+ +N + ++++ + +++ + LKE F+ FG+I +
Sbjct: 159 GALLKGCRLFVGPFKNRKDRQAELQNKANEFTNVYIKNFGDDMDDERLKEIFSHFGKILS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D + +SKG+ FVSF A+ A+ MNG+ L + + + +K ER+
Sbjct: 219 VKVMTDSRG-RSKGFGFVSFDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKA-----ERQ 272
Query: 185 RQNSHTKTITFDEVYNQSSP--TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + F+++ + +Y +++E + + FS FG+I ++V KE
Sbjct: 273 AE----LKLMFEQMKQERYRRFRGVKLYIKNLDDSIDDERLRREFSSFGSISRVKVMKEE 328
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQP 289
KG+ + F++ E AT A+ ++NG + G +S N + +P
Sbjct: 329 GRSKGFGLICFSSPEEATKAM-----VEMNGRIL----GSKSLNIALAQRP 370
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS G + KV+ + + + F+ F H A A+
Sbjct: 190 TNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVSFDSHEAAQRAVEI 249
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHYH---IFVGDLSPEI 107
MN K+ + E+K+ + Q KQ+ + +++ +L I
Sbjct: 250 MNGKDLSGQPLFVGRAQKKAERQAELKLMF-----EQMKQERYRRFRGVKLYIKNLDDSI 304
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F+ FG IS +++++ +SKG+ + F EA A+ MNG+ LGS+S+
Sbjct: 305 DDERLRREFSSFGSISRVKVMKEEG--RSKGFGLICFSSPEEATKAMVEMNGRILGSKSL 362
Query: 168 RTNWSTR 174
+ R
Sbjct: 363 NIALAQR 369
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G ++ E+L+ K FS G ++ IR+ ++ GYA+V F A A++
Sbjct: 10 ASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALD 69
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G +++ W
Sbjct: 70 TMNFDMIKGKSIRLMW 85
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 74 TIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQN 133
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ E+ ++NWA+ D IFVGDL+ ++ L E FA + +
Sbjct: 134 YAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSV 193
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNG + SR +R +T +
Sbjct: 194 KAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPR------- 246
Query: 183 RKRQNSHTKTITFDEVYNQS--SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ + H + + NQS TN T++ GG ++++E + + FS +G IV +++
Sbjct: 247 --KSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 304
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG FV+F + A A++ ++ T I TV+ WG+ N
Sbjct: 305 GKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPAN 346
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPG---NDPYAFLEFVHHT 57
D +++VG+L VT+ LL F+ + P VK KV+ + + Y F+ F
Sbjct: 160 SDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDN 219
Query: 58 VAATALAAMNKRVFLEKEMKVNWAS--------------SPGNQPKQDTSNHYHIFVGDL 103
A+ MN + M++ A+ NQ + D++N IFVG L
Sbjct: 220 ERTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTN-TTIFVGGL 278
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + + L++ F+ +GEI + +I KG FV F + AE A+ +NG +G
Sbjct: 279 DPNVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTTIG 332
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 333 KQTVRLSWG-RNP 344
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 267 DSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEEAL 323
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N ++ ++++W +P N+
Sbjct: 324 QKLNGTTIGKQTVRLSWGRNPANK 347
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD S+ E+LL F G + K++ + N+ YAF+E++ A
Sbjct: 79 ETSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNNNVNYAFIEYLKSHDANV 138
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N K +++NWA +Q ++ + +++FVGDL+ +++ +TL AF F
Sbjct: 139 ALQTLNGIQIEGKTVRINWAFQ--SQQTTNSDDTFNLFVGDLNVDVDDETLSHAFDQFPS 196
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------ 175
++ D QT +S+GY FVSF + +A+ A+ M G + R++R NW+T++
Sbjct: 197 YVQAHVMWDMQTGRSRGYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATKRENNNNN 256
Query: 176 ------------------------PP---------AMTNERKRQNSHTKTI----TFDEV 198
PP M ++Q D++
Sbjct: 257 NGNGPRRGGFHNNNNMGGNRGGMIPPTALGMPPMDGMIPNPQQQAPVAPPPVNPQAIDDM 316
Query: 199 YNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHA 258
++ P T Y G E + + FG I+D + EKG F+K+ T E A
Sbjct: 317 IRRAPPRVTTAYIGNIPHFATEADLIPLLQNFGFILDFSHYPEKGCCFIKYDTHEQAAVC 376
Query: 259 IESIHNTDINGHTVKCFWGKE 279
I ++ N G ++ WGKE
Sbjct: 377 IVALANFPFQGRNLRTGWGKE 397
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q ++TS+ ++VG+L I LK+ F G+I++ +I+ D + + YAF+ ++K
Sbjct: 75 QGGRETSDRV-LYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKN-NNVNYAFIEYLK 132
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
+A A+ +NG + +++R NW+ + +T D+ +N
Sbjct: 133 SHDANVALQTLNGIQIEGKTVRINWAFQS--------------QQTTNSDDTFN------ 172
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIE 260
++ G D+++E +S F F + V D++ + +GY FV F +E A A+
Sbjct: 173 --LFVGDLNVDVDDETLSHAFDQFPSYVQAHVMWDMQTGRSRGYGFVSFADQEQAQEAMN 230
Query: 261 SIHNTDINGHTVKCFWGKESE 281
+ ING V+ W + E
Sbjct: 231 VMQGMPINGRAVRINWATKRE 251
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 8/290 (2%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L + F G + KVIR ++ Y F+EF+ H A L
Sbjct: 94 TIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQN 153
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ E+ ++NWA+ + D + IFVGDL+ ++ L+E F + + +
Sbjct: 154 YGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSV 213
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F +E A+T MNG + SR +R +T P +
Sbjct: 214 KAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAAT--PRKSSGY 271
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+++ + + + N T++ GG ++ +E + + FS +G IV +++ K
Sbjct: 272 QQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK 331
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAP 292
G FV+F ++ A A++ ++ T I TV+ WG+ N A +P
Sbjct: 332 GCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSP 381
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREPG---NDPYAFLEFVHHT 57
D + +++VG+L VT+ LL F S+ VK KV+ + + Y F+ F +
Sbjct: 180 SDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDS 239
Query: 58 VAATALAAMNKRVFLEKEMKV-------------------NWASSPGNQPKQDTSNHYHI 98
A+ MN + M++ N AS+ G Q D SN+ I
Sbjct: 240 ERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGD-SNNTTI 298
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVG L P + + LK+ F+ +GEI + +I KG FV F + AE A+ +N
Sbjct: 299 FVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VGKGCGFVQFANRDNAEEALQKLN 352
Query: 159 GQWLGSRSIRTNWSTRKP 176
G +G +++R +W R P
Sbjct: 353 GTVIGKQTVRLSWG-RNP 369
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q ++ + + I++GDL ++ L F GEI++ +++R+ QT S+GY FV F+
Sbjct: 84 QQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLT 143
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A AE + G + + R NW+T T +++ N+
Sbjct: 144 HATAEKVLQNYGGILMPNTEQPFRLNWATFS----TGDKRSDNA---------------- 183
Query: 205 TNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTKETATH 257
+ +++ G D+ + L+ + F + D + KGY FV+F T
Sbjct: 184 PDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQ 243
Query: 258 AIESIHNTDING 269
A+ T++NG
Sbjct: 244 AM-----TEMNG 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +VT+E L FSQ G + K+ P F++F + A AL
Sbjct: 292 DSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKI---PVGKGCGFVQFANRDNAEEAL 348
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N V ++ ++++W +P N+
Sbjct: 349 QKLNGTVIGKQTVRLSWGRNPANK 372
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 14/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFS--QIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATAL 63
T++VG+L + E L + F+ + + KVIR N + Y F+EF H VA L
Sbjct: 104 TIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVL 163
Query: 64 AAMNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PF 119
N ++ ++NWAS S G + ++ IFVGDL+P++ L E F+ +
Sbjct: 164 QEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKY 223
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
+ ++V D T +SKGY FV F + E A+T MNG SR++R +T P
Sbjct: 224 PSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT---PRK 280
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
TN ++Q + + F ++ N T++ GG + +E + + FS FG IV +++
Sbjct: 281 TNGYQQQGGYMPSGAF--TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIP 338
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG FV+F + A A+E ++ T I TV+ WG+ N
Sbjct: 339 VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPAN 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E L FS+ G + K+ P F++FV+ A AL +N
Sbjct: 306 TTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKI---PVGKGCGFVQFVNRPNAEEALEKLN 362
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
V ++ ++++W +P N QP+ N +
Sbjct: 363 GTVIGKQTVRLSWGRNPANKQPRDKYGNQW 392
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 129 MNFDMIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 185
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK +
Sbjct: 186 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD-------R 236
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+K F TN +Y FG D+++E + VFS +G + ++V
Sbjct: 237 EAELRSKASEF---------TN--IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSG 285
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 286 KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 335
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S +I++ + +++ + LK+ F+ +G+ +
Sbjct: 218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSV 277
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 278 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 329
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 330 QAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 386
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 387 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 415
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 245 SEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 304
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 305 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 364
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 365 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Query: 170 NWSTR 174
+ R
Sbjct: 423 ALAQR 427
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 39/296 (13%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS++GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RMASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN V K +++ W+ K N +F+ +L I+ ++L E F+ FG+I
Sbjct: 68 LDTMNFDVVKGKAIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKSLYECFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTN 181
+ +++ D + SKGYAFV F ++ A+ AI MNG++L + + +RK
Sbjct: 125 LSSKVMSDDRG--SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREA-- 180
Query: 182 ERKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF- 239
E+ N++S TN VY FG D+++E + +VFS +G I+ ++V
Sbjct: 181 ---------------ELRNKASEFTN--VYIKNFGDDMDDERLREVFSTYGRILSVKVMT 223
Query: 240 ----KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K +G+ FV F + E A A+E ++ ++NG + F G K+ E + L Q
Sbjct: 224 NSCGKSRGFGFVSFDSHEAARKAVEEMNGKEVNGQPI--FVGRAQKKVERQAELKQ 277
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 23/272 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 99 NVFIKNLDKSIDNKSLYECFSAFGKILSSKVMSDDRGSKGYAFVHFQSQSAADRAIEEMN 158
Query: 68 KRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + ++ V S ++ + S ++++ + +++ + L+E F+ +G I +
Sbjct: 159 GKFLKDCKVFVGRFKSRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSTYGRILS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ + KS+G+ FVSF A A+ MNG+ + + I + +K
Sbjct: 219 VKVMTNS-CGKSRGFGFVSFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKVE------- 270
Query: 185 RQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
RQ + E + C +Y +++++E + K FS FG+I ++V +E
Sbjct: 271 RQAELKQMF---EQLKKERIRGCQGAKLYIKNLDENIDDEKLRKEFSSFGSISRVKVMQE 327
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDING 269
KG+ + F++ E A A+ ++ N I G
Sbjct: 328 EGQSKGFGLICFSSSEDAARAM-TVMNGRILG 358
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS G + KV+ + + F+ F H A A
Sbjct: 187 SEFTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFVSFDSHEAARKA 246
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN + +F+ E++ ++ + + +++ +L I+
Sbjct: 247 VEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRGCQGAKLYIKNLDENIDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ L++ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+
Sbjct: 307 EKLRKEFSSFGSISRVKVMQEEG--QSKGFGLICFSSSEDAARAMTVMNGRILGSK 360
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 74/346 (21%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAATALAAMN 67
++V NL + TE L +F+ +GP++ KV+ R Y F+EFV + A A+ ++
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASRNSAGLAYGFVEFVDVSSAERAVRTLD 88
Query: 68 KRVFLEKEMKVNWA-----------SSPGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEA 115
+ +KV WA + P P + + H+FVGDLSP+++ L +
Sbjct: 89 GWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSNAGNAHLFVGDLSPDVDDSMLYSS 148
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F+ + + R++ D +T KS+G+ FVSF K +AE I AM GQWLG R IR NW+ +K
Sbjct: 149 FSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIRVNWANQK 208
Query: 176 ------------------PPAMTNERKRQNSHTKTIT-----FDEVYNQSSP-------- 204
PP + + T+T F V + P
Sbjct: 209 NSQLSIMSATAENPSSTPPPQYPGAYSQLDPFDSTVTSTASFFPPVADLGLPGLPRRHTT 268
Query: 205 TNCTVYCGGFGKDLN-EELVS------------------------KVFSPF--GTIVDIR 237
T T + G G L+ ++++S +VF+PF G V+ R
Sbjct: 269 TGPTKFPSGTGAKLHFDQVLSEAPASVSSVYVGNLSPLTTAADLVRVFAPFNRGHSVEAR 328
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDINGHT--VKCFWGKESE 281
+ +GY FV T E A AI ++ N + H+ ++ W KE E
Sbjct: 329 IPPARGYGFVTLATHEYAASAISTLSNQGVFLHSRWLRLGWQKERE 374
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+ V +L + L++ FA G I + ++V + Y FV FV + AE A+ +
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVAS-RNSAGLAYGFVEFVDVSSAERAVRTL 87
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPT-----NCTVYCG 212
+G I+ W+ +Q+ H + +T E ++S+PT N ++ G
Sbjct: 88 DGWLCFGIPIKVCWA------------KQSMHPEAMTVTEP-DRSAPTHSNAGNAHLFVG 134
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTD 266
D+++ ++ FS ++VD+RV K +G+ FV F +K A I ++
Sbjct: 135 DLSPDVDDSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQW 194
Query: 267 INGHTVKCFWGKESENNSTLAQPSAPTTPQPNST-APQFPYIYNQQMGYWYPQAAAYTAT 325
+ G ++ W ++ NS L+ SA T P+ST PQ+P Y+Q P + T+T
Sbjct: 195 LGGRQIRVNWA--NQKNSQLSIMSA-TAENPSSTPPPQYPGAYSQ----LDPFDSTVTST 247
Query: 326 AAQLPQQFYQYGQLGYP 342
A+ P LG P
Sbjct: 248 ASFFP----PVADLGLP 260
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 98 IFVGDLSPEIETQTLKEAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
++VG+LSP L FAPF G RI ++GY FV+ A +AI+
Sbjct: 298 VYVGNLSPLTTAADLVRVFAPFNRGHSVEARIP------PARGYGFVTLATHEYAASAIS 351
Query: 156 AMNGQ--WLGSRSIRTNW-STRKPPAM 179
++ Q +L SR +R W R+ PA+
Sbjct: 352 TLSNQGVFLHSRWLRLGWQKEREKPAL 378
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 110 TVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQN 169
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ E+ ++NWA+ + D + IFVGDL+ ++ L E F + + +
Sbjct: 170 YAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSV 229
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNG + SR++R +T P +
Sbjct: 230 KAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAAT---PRKSTG 286
Query: 183 RKRQNSHTKTITFDEVYN-QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ Q + + + TN T++ GG ++ +E + + FS +G IV +++
Sbjct: 287 YQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVG 346
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
KG FV+F ++ A A++ ++ T I TV+ WG+ N L
Sbjct: 347 KGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQL 391
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 31/198 (15%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREPG---NDPYAFLEFVHHT 57
D + +++VG+L VT+ LL F S+ VK KV+ + + Y F+ F
Sbjct: 196 SDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDN 255
Query: 58 VAATALAAMNKRVFLEKEMKV-------------------NWASSPGNQPKQDTSNHYHI 98
A+ MN + M++ N AS Q D++N I
Sbjct: 256 ERTQAMTEMNGVYCSSRAMRIGAATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNT-TI 314
Query: 99 FVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMN 158
FVG L P + + LK+ F+ +GEI + +I KG FV F ++ AE A+ +N
Sbjct: 315 FVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VGKGCGFVQFASRSNAEEALQKLN 368
Query: 159 GQWLGSRSIRTNWSTRKP 176
G +G +++R +W R P
Sbjct: 369 GTVIGKQTVRLSWG-RNP 385
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +VT+E L FSQ G + K+ P F++F + A AL
Sbjct: 308 DSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKI---PVGKGCGFVQFASRSNAEEAL 364
Query: 64 AAMNKRVFLEKEMKVNWASSPGN--QPKQDTSNHY 96
+N V ++ ++++W +P N Q + D N +
Sbjct: 365 QKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQW 399
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 14/283 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGN---DPYAFLEFVHHTVAATAL 63
T++VG+L + E L + F+ + KVIR N + Y F+EF H VA L
Sbjct: 102 TIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVL 161
Query: 64 AAMNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PF 119
N ++ ++NWAS S G + ++ IFVGDLSP++ L E F+ +
Sbjct: 162 REFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKY 221
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
+ ++V D T +SKGY FV F + E A+T MNG SR++R +T P
Sbjct: 222 PSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT---PRK 278
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
TN ++Q + T + N T++ GG + +E + + F+ FG IV +++
Sbjct: 279 TNGYQQQGGYMPNGTLTRP--EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIP 336
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG FV+F + A A+E ++ T I TV+ WG+ N
Sbjct: 337 VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPAN 379
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E L F++ G + K+ P F++FV+ A AL +N
Sbjct: 304 TTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKI---PVGKGCGFVQFVNRPNAEEALEKLN 360
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
V ++ ++++W +P N QP+ N +
Sbjct: 361 GTVIGKQTVRLSWGRNPANKQPRDKYGNQW 390
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A A
Sbjct: 107 RQASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKA 166
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 167 LDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 223
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTN 181
+ +++ D Q S+GYAFV F + A+ AI MNG L R + RK
Sbjct: 224 LSSKVMSDDQG--SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRK----DR 277
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-- 239
E + QN +E N VY FG D+++E + +VFS +G + ++V
Sbjct: 278 EAELQNK------VNEFTN--------VYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTD 323
Query: 240 ---KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ D+NG + F G K+SE + L Q
Sbjct: 324 SGGKSKGFGFVSFDSHEAAKKAVEEMNGKDVNGQLL--FVGRAQKKSERQAELKQ 376
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 199 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQNAADRAIEEMNG 258
Query: 69 RVFLEKEMKVNWASSPGNQPK--QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ + + V + ++ Q+ N + +++V + +++ + LKE F+ +G+ +
Sbjct: 259 ALLKDCRLFVGRFKNRKDREAELQNKVNEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSV 318
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K +R
Sbjct: 319 KVMTDSGG-KSKGFGFVSFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKS-------ER 370
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E Q C +Y +++E + + FS FG+I +++ +E
Sbjct: 371 QAELKQMF---EQLKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREE 427
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ ++NG +
Sbjct: 428 GRSKGFGLICFSSPEEATKAM-----AEMNGRIL 456
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +YV N + +E L +FS+ G KV+ + G + F+ F H A A+
Sbjct: 289 TNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFVSFDSHEAAKKAVEE 348
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN + +F+ E++ ++ Q + +++ +L I+ + L
Sbjct: 349 MNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDDTIDDEKL 408
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
F+ FG IS +I+R+ +SKG+ + F EA A+ MNG+ LGS+
Sbjct: 409 WREFSSFGSISRVKIMREEG--RSKGFGLICFSSPEEATKAMAEMNGRILGSK 459
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + K++RE G + + F A A+A
Sbjct: 390 QGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMA 449
Query: 65 AMNKRVFLEKEMKVNWASSP 84
MN R+ K + + A P
Sbjct: 450 EMNGRILGSKPLYIALAQRP 469
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 98 TIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQN 157
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ E+ ++NWA+ D IFVGDL+ ++ L E FA + +
Sbjct: 158 YAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSV 217
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + A+T MNG + SR +R +T +
Sbjct: 218 KAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPR------- 270
Query: 183 RKRQNSHTKTITFDEVYNQS--SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ + H + + NQS TN T++ GG ++++E + + FS +G IV +++
Sbjct: 271 --KSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 328
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG FV+F + A A++ ++ T I TV+ WG+ N
Sbjct: 329 GKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPAN 370
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPG---NDPYAFLEFVHHT 57
D +++VG+L VT+ LL F+ + P VK KV+ + + Y F+ F
Sbjct: 184 SDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDN 243
Query: 58 VAATALAAMNKRVFLEKEMKVNWAS--------------SPGNQPKQDTSNHYHIFVGDL 103
A+ MN + M++ A+ NQ + D++N IFVG L
Sbjct: 244 QRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTN-TTIFVGGL 302
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + + L++ F+ +GEI + +I KG FV F + AE A+ +NG +G
Sbjct: 303 DPNVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTSIG 356
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 357 KQTVRLSWG-RNP 368
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 291 DSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEEAL 347
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N ++ ++++W +P N+
Sbjct: 348 QKLNGTSIGKQTVRLSWGRNPANK 371
>gi|68478681|ref|XP_716609.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|238880985|gb|EEQ44623.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 510
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%), Gaps = 6/172 (3%)
Query: 10 LYVGNLDVSVTEELLCALFSQIG-PVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
LYVGNL S +EE + LFS G PVK K++ + YAF+E+ + VA AL +
Sbjct: 81 LYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFNYAFIEYDTNEVADMALNTL 140
Query: 67 NKRVFLEKEMKVNWA---SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N R+ + E+KVNWA ++ P ++IFVGDLSPE+ + L+ AF+ F +
Sbjct: 141 NGRLVDDVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFESLK 200
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FV+F +++AE A+ MNG+WL R+IR NW++ K
Sbjct: 201 QAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWASHK 252
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 73 EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE-ISNCRIVRDP 131
+ E +VN AS+ + ++ SN ++VG+L +T++E F+ G + +I+ D
Sbjct: 59 DDEKQVNAASA--KEGGREVSNKI-LYVGNLPKSASEETIQELFSVGGNPVKTIKILND- 114
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
+ YAF+ + A+ A+ +NG+ + I+ NW+ + N
Sbjct: 115 KNKAGFNYAFIEYDTNEVADMALNTLNGRLVDDVEIKVNWAFQSAAIAGNPNN------- 167
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVFKEKGYA 245
T + ++N ++ G ++N+E + FS F ++ D++ + +GY
Sbjct: 168 --TEEPLFN--------IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYG 217
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVKCFW 276
FV F + A A+++++ + G ++C W
Sbjct: 218 FVTFGNQSDAELALQTMNGEWLCGRAIRCNW 248
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
++D V Q+ TVY G ++ + + FG IVD + E+G AFVK+ T E
Sbjct: 399 SYDIVLRQTPSWQTTVYLGNIAHFTQQQELIPLLQNFGFIVDFKFHPERGCAFVKYDTHE 458
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ++NG +KC WGKE
Sbjct: 459 RAALAIIQLAGFNLNGRPLKCGWGKE 484
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 17/285 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + + L F G V K+IR ++ Y F+EF A L +
Sbjct: 10 TLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHS 69
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
N + E+ ++NWA+ + D + IFVGDL+ ++ L+E FA + +
Sbjct: 70 YNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSV 129
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+ MNG + SR +R +T P +
Sbjct: 130 KGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT--PKKASGY 187
Query: 183 RKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTI 233
+++ +S + N TN T++ GG ++ +E + + FS FG +
Sbjct: 188 QQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEV 247
Query: 234 VDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
V +++ KG FV+F + +A A++ ++ T I TV+ WG+
Sbjct: 248 VSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGR 292
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD VT+E L FSQ G V K+ P F++F + A AL
Sbjct: 217 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKI---PVGKGCGFVQFANRNSAEDAL 273
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
+N V ++ ++++W +P + Q + D++N ++
Sbjct: 274 QRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWN 308
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAAT 61
E+ LYVGNL S +EE + LFS P+K K++ + YAF+EF + A
Sbjct: 50 ETSNKILYVGNLPKSASEEQISELFSVSKPIKSIKLLNDKNKLGFNYAFIEFDDNQEADM 109
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH--YHIFVGDLSPEIETQTLKEAFAPF 119
AL+ +N ++ E++VNWA T Y++FVGDLS E+ + LK+AF F
Sbjct: 110 ALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPTYNLFVGDLSSEVNDEALKKAFNKF 169
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FV+F K+ +AE A+ MNG WLG R+IR NW+ K
Sbjct: 170 DSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGRAIRCNWAAHK 225
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
++TSN ++VG+L + + E F+ I + +++ D L YAF+ F E
Sbjct: 49 RETSNKI-LYVGNLPKSASEEQISELFSVSKPIKSIKLLNDKNKL-GFNYAFIEFDDNQE 106
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
A+ A++ +NG+ L + IR NW+ + + + D YN +
Sbjct: 107 ADMALSTLNGKLLNNCEIRVNWAYQSATIAS----------SSTPEDPTYN--------L 148
Query: 210 YCGGFGKDLNEELVSKVFSPFGT------IVDIRVFKEKGYAFVKFTTKETATHAIESIH 263
+ G ++N+E + K F+ F + + D++ + +GY FV F+ +E A A+++++
Sbjct: 149 FVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMN 208
Query: 264 NTDINGHTVKCFWGKESENNS 284
+ G ++C W + N+
Sbjct: 209 GAWLGGRAIRCNWAAHKQVNN 229
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 31/280 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI------REPGNDPYAFLEFVHHTVAATA 62
L+VG+L V +E L F++ K V+ R G Y F+ F A A
Sbjct: 147 NLFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRG---YGFVTFSKQEDAELA 203
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + ++ NWA+ ++ + ++ YH + + + + P+
Sbjct: 204 LQTMNGAWLGGRAIRCNWAA---HKQVNNRNSDYH-------SKNNNRYNQRQYRPY--- 250
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW-LGSRSIRTNWSTRKPPAMTN 181
N R + + + NG LGS+ + + PP N
Sbjct: 251 -NGRNYNSYHSNQYSNNGSQHIAAPGLILPELNLSNGSLPLGSQQLLS-----SPPNGLN 304
Query: 182 ERKRQ--NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+Q N ++D V Q+ TVY G ++ + + FG IVD +
Sbjct: 305 GNAQQTGNIVMSPQSYDIVLRQTPSWQTTVYLGNIAHATQQQEMLPLLQNFGFIVDFKFH 364
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
EKG AFVK+ + E A AI + ++NG +KC WGKE
Sbjct: 365 PEKGCAFVKYDSHERAALAIIQLAGFNLNGRPLKCGWGKE 404
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ YA++ F+ A AL
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 129 MNFDIIKGKSIRLMWSQRDAYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSS 185
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNERK 184
+++ D Q SKGYAFV F ++ A+ AI MNG+ L G + + RK
Sbjct: 186 KVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA----- 238
Query: 185 RQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
E+ +++S TN +Y FG ++++E + VFS +G + ++V
Sbjct: 239 ------------ELRSKASEFTN--IYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSS 284
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K+ E + L Q
Sbjct: 285 GKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI--FVGRAQKKVERQAELKQ 335
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + + A A+ MN
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ ++ V + ++ + S +I++ + E++ + LK+ F+ +G+ +
Sbjct: 218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSV 277
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + I + +K +R
Sbjct: 278 KVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV-------ER 329
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
Q + E + C +Y +++E + FS FG+I ++V +E
Sbjct: 330 QAELKQMF---EQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE 386
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 387 GQSKGFGLICFSSPEDATKAM-----TEMNGRIL 415
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L F+ G + + RI RD T +S GYA+V+F++ A+A+ A+ M
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + +SIR WS R D +S N V+ K
Sbjct: 130 NFDIIKGKSIRLMWSQR---------------------DAYLRRSGIGN--VFIKNLDKS 166
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + + FS FG I+ +V + KGYAFV F + A AIE ++ + G K
Sbjct: 167 IDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKG--CK 224
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ + + S A +F IY + G
Sbjct: 225 VFVGR--------FKNRKDREAELRSKASEFTNIYIKNFG 256
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 245 SEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 304
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN R +F+ E++ ++ + + +++ +L I+
Sbjct: 305 VEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDD 364
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F+ FG IS +++++ +SKG+ + F +A A+T MNG+ LGS+ +
Sbjct: 365 EKLRNEFSSFGSISRVKVMQEEG--QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Query: 170 NWSTR 174
+ R
Sbjct: 423 ALAQR 427
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 137/291 (47%), Gaps = 18/291 (6%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVA 59
+E+ +TL++G+L + E L F+ +G V K+IR ++ Y F+E A
Sbjct: 8 EEAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATA 67
Query: 60 ATALAAMNKRVF--LEKEMKVNWAS-------SPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
AL A+N ++ ++NWAS + G SN + IFVGDL PE+
Sbjct: 68 EHALRALNGTQMPNAQQNYRLNWASFGVGARFAGGGDGGATNSNDHSIFVGDLPPEVNDF 127
Query: 111 TLKEAFAP-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
L+E F+ + + N R+V DP T +SKG+ FV F +++ + A+ MNG GSR++R
Sbjct: 128 MLQEVFSSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMRI 187
Query: 170 NWST-RKPPAM---TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
+ + RK + + NCTV+ GG G + EL
Sbjct: 188 SLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTVFVGGLGSISDAELRIH 247
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
F P+G +V I++ KG FV+F + A AI ++N I V+ W
Sbjct: 248 -FEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGTSRVRLSW 297
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 45/205 (21%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFS-QIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
S +++VG+L V + +L +FS + V+ +V+ +P + + F+ F +
Sbjct: 110 SNDHSIFVGDLPPEVNDFMLQEVFSSRYASVRNARVVTDPATGRSKGFGFVRFADESQRD 169
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH----------------------- 97
AL MN + M+++ A P+++ + Y
Sbjct: 170 RALVEMNGLACGSRNMRISLAI-----PRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDD 224
Query: 98 ------IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
+FVG L I L+ F P+GE+ +I P KG FV F +++ AE
Sbjct: 225 GDDNCTVFVGGLG-SISDAELRIHFEPYGELVYIKI---PH---GKGCGFVQFAQRSCAE 277
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKP 176
AI +N +G+ +R +W P
Sbjct: 278 AAIAGLNNALIGTSRVRLSWVRSNP 302
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 25/282 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR + + Y F EF H A L
Sbjct: 98 TLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQN 157
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEI 122
+ ++ ++NWA+ D IFVGDL+ ++ L E F+ + +
Sbjct: 158 YAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSV 217
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST------RKP 176
++V D T +SKGY FV F ++E A+T MNG + SR +R +T +P
Sbjct: 218 KAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQP 277
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
TN Q+ ++ TN T++ GG ++ +E + + FS +G I +
Sbjct: 278 GGQTNGTSSQS-------------EADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASV 324
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
++ KG FV+F + A A++ ++ T I TV+ WG+
Sbjct: 325 KIPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQTVRLSWGR 366
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPG---NDPYAFLEFVHHT 57
D +++VG+L VT+ +L FS P VK KV+ + + Y F+ F +
Sbjct: 184 SDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDES 243
Query: 58 VAATALAAMNKRVFLEKEMKVNWAS---SPGNQPKQDT----------SNHYHIFVGDLS 104
+ A+ MN + M++ A+ S G+QP T S + IFVG L
Sbjct: 244 ERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIFVGGLD 303
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
+ + LK+ F+ +GEI++ +I KG FV F + AE A+ +NG +G
Sbjct: 304 SNVTDEDLKQTFSQYGEIASVKIP------VGKGCGFVQFANRNNAEEALQKLNGTMIGK 357
Query: 165 RSIRTNWSTRKP 176
+++R +W R P
Sbjct: 358 QTVRLSWG-RNP 368
>gi|255634993|gb|ACU17855.1| unknown [Glycine max]
Length = 210
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VTE LL +FS GPV+GCK+IR+ Y F+ + AA A
Sbjct: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRK-DKSSYGFIHYFDRRSAALA 110
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + G ++DTS HY+IFVGDLSPE+ TL + +
Sbjct: 111 ILSLNGRHLFGQPIKVNWAYTSGQ--REDTSGHYNIFVGDLSPEVTDATLFACSSVYPSC 168
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
S+ R++ D +T +S+G+ FVSF + +A+++I + G+WL
Sbjct: 169 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGKWL 208
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ ++ L+E F+ G + C+++R ++ Y F+ + +
Sbjct: 49 PGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKS----SYGFIHYFDR 104
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ + +R+ + H YN
Sbjct: 105 RSAALAILSLNGRHLFGQPIKVNWA-----YTSGQREDTSGH---------YN------- 143
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + S + + D RV + +G+ FV F ++ A +I
Sbjct: 144 -IFVGDLSPEVTDATLFACSSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSIND 202
Query: 262 I 262
+
Sbjct: 203 L 203
>gi|241953527|ref|XP_002419485.1| poly uridylate-binding protein, putative; poly(A)+ RNA-binding
protein, putative [Candida dubliniensis CD36]
gi|223642825|emb|CAX43080.1| poly uridylate-binding protein, putative [Candida dubliniensis
CD36]
Length = 497
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
Query: 10 LYVGNLDVSVTEELLCALFSQIG-PVKGCKVIREPGND--PYAFLEFVHHTVAATALAAM 66
LYVGNL S +EE++ LFS G PVK KV+ + YAF+E+ + A AL +
Sbjct: 72 LYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDKNKAGFNYAFIEYDTNEAADMALNTL 131
Query: 67 NKRVFLEKEMKVNWA---SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N R+ E+KVNWA ++ P ++IFVGDLSPE+ + L+ AF+ F +
Sbjct: 132 NGRLVDNVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFESLK 191
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FV+F +++AE A+ MNG+WL R+IR NW++ K
Sbjct: 192 QAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWASHK 243
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 73 EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQ 132
+ E +VN AS+ + ++ SN ++VG+L + ++E F+ G V + +
Sbjct: 50 DDEKQVNAASA--KEGGREVSNKI-LYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDK 106
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
YAF+ + A+ A+ +NG+ + + I+ NW+ + N
Sbjct: 107 NKAGFNYAFIEYDTNEAADMALNTLNGRLVDNVEIKVNWAFQSAAIAGNPNN-------- 158
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVFKEKGYAF 246
T + ++N ++ G ++N+E + FS F ++ D++ + +GY F
Sbjct: 159 -TEEPLFN--------IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGF 209
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFW 276
V F + A A+++++ + G ++C W
Sbjct: 210 VTFGNQSDAELALQTMNGEWLCGRAIRCNW 239
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
+++ V Q+ TVY G ++ + + FG IVD + E+G AFVK+ T E
Sbjct: 386 SYEIVLRQTPSWQTTVYLGNIAHFTQQQELIPLLQNFGFIVDFKFHPERGCAFVKYDTHE 445
Query: 254 TATHAIESIHNTDINGHTVKCFWGKE 279
A AI + ++NG +KC WGKE
Sbjct: 446 RAALAIIQLAGFNLNGRPLKCGWGKE 471
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 35/291 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A AL
Sbjct: 110 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDT 169
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN K +++ W+ K N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 170 MNFDTIKGKPIRLMWSQRDAYLRKSGIGN---VFIKNLDRSIDNKTLYEHFSAFGKILSS 226
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D Q S+GYAFV F + A+ AI MNG L + + R +
Sbjct: 227 KVMSDDQG--SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELRNK 284
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
N T VY FG D+++E + +VFS +G + ++V K
Sbjct: 285 ANEFT-----------------NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGK 327
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
KG+ FV F + E A A+E ++ DING + F G K+SE + L Q
Sbjct: 328 SKGFGFVSFDSHEAAKKAVEEMNGKDINGQLL--FVGRAQKKSERQAELKQ 376
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 131/275 (47%), Gaps = 27/275 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 198 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMN 257
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ--DTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + + V + ++ + + +N + ++++ + +++ + LKE F+ +G+ +
Sbjct: 258 GALLKDCRLFVGRFKNRKDREAELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLS 317
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K +
Sbjct: 318 VKVMTDSSG-KSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKS-------E 369
Query: 185 RQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
RQ + E Q C +Y +++E + + FS FG+I +++ +E
Sbjct: 370 RQAELKQVF---EQLKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMRE 426
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ ++NG +
Sbjct: 427 EGRSKGFGLICFSSPEEATKAM-----AEMNGRIL 456
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A+
Sbjct: 289 TNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEE 348
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN + +F+ E++ ++ Q + +++ +L I+ + L
Sbjct: 349 MNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDTIDDEKL 408
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
F+ FG IS +I+R+ +SKG+ + F EA A+ MNG+ LGS+ +
Sbjct: 409 WREFSSFGSISRVKIMREEG--RSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + K++RE G + + F A A+A
Sbjct: 390 QGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMA 449
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
MN R+ K + + A P + N YH
Sbjct: 450 EMNGRILGSKPLYIALAQKPXER------NAYH 476
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E + + F+ G V K+IR + Y F+E H A L
Sbjct: 51 TLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQT 110
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWAS G K+D S + IFVGDL+ ++ L+E F A F +
Sbjct: 111 YNGTPMPNGEQNFRLNWASFSGGD-KRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSV 169
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A+T MNG + +R +R ++ K + +
Sbjct: 170 KGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASNKKAVVGQQ 229
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ + + N P N T++ G ++ ++ + ++F +G ++ +++ K
Sbjct: 230 YPKASYQNP-----QPQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGK 284
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
FV+F + +A A++ ++ ++G ++ WG+ N AQP A
Sbjct: 285 RCGFVQFADRSSAEEALKMLNGAQLSGQNIRLSWGRNPSNKQ--AQPDA 331
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 137 DDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESE 196
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP--------------GNQPKQDTS-NHYHIFVGDL 103
A+ MN + M+V AS+ QP+ D N+ IFVG+L
Sbjct: 197 QLRAMTEMNGAFCSTRPMRVGLASNKKAVVGQQYPKASYQNPQPQNDGDPNNTTIFVGNL 256
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+ LKE F +G++ + +I K FV F ++ AE A+ +NG L
Sbjct: 257 DSNVMDDHLKELFGQYGQLLHVKIP------AGKRCGFVQFADRSSAEEALKMLNGAQLS 310
Query: 164 SRSIRTNWSTRKP 176
++IR +W R P
Sbjct: 311 GQNIRLSWG-RNP 322
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +V ++ L LF Q G + K+ P F++F + A AL +N
Sbjct: 249 TTIFVGNLDSNVMDDHLKELFGQYGQLLHVKI---PAGKRCGFVQFADRSSAEEALKMLN 305
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSN 94
+ ++++W +P N+ Q +N
Sbjct: 306 GAQLSGQNIRLSWGRNPSNKQAQPDAN 332
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 29/277 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG LD SV+E LL +FS IG V +V R+ YA++ F H
Sbjct: 39 ENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 98
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
TA+ +N + ++ W+ + K+ + N IF+ +L P+I+ +TL E F+ FG
Sbjct: 99 TAIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGN---IFIKNLHPDIDNKTLYETFSVFG 155
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
I +C+I D +T KSKG+ FV F + A AI A+NG L + + K
Sbjct: 156 NILSCKIAND-ETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHVSK----- 209
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ RQ+ DE +++ TN VY + EE +F P+GTI + + K
Sbjct: 210 --KDRQSK------LDEA--RANFTN--VYVKNLDLEATEEDFENLFKPYGTITSVALEK 257
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ FV F E A A+E++++T+ G T+
Sbjct: 258 DAEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTL 294
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NL + + L FS G + CK+ E G + F+ F + A A+ A+N
Sbjct: 133 IFIKNLHPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAIN 192
Query: 68 KRVFLEKEMKVN-WASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ +E+ V S Q K D +N +++V +L E + + F P+G I++
Sbjct: 193 GMLLNGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITS 252
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+ +D + KS+G+ FV F +A A+ A+N +++ + +K + E K
Sbjct: 253 VALEKDAEG-KSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERL-QELK 310
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+Q +K + + ++ +++E + + F+PFGTI RV
Sbjct: 311 KQYQASK------LEKLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENG 364
Query: 240 KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 365 KSKGFGFVCFSTPEEATRAI 384
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAATALAA 65
T +YV NLD+ TEE LF G + + + E + + F++F +H A A+ A
Sbjct: 224 TNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEA 283
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQT 111
+N + + + V A + Q+ Y ++F+ +L I+ +
Sbjct: 284 LNDTEYKGQTLYVGRAQKKYER-LQELKKQYQASKLEKLAKYQGINLFIKNLDDSIDDEK 342
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
LKE FAPFG I++ R++R + KSKG+ FV F EA AIT N Q + + +
Sbjct: 343 LKEEFAPFGTITSARVMR-TENGKSKGFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAI 401
Query: 172 STRK 175
+ RK
Sbjct: 402 AQRK 405
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G ++E L+ +FSP G++ IRV ++ GYA+V F E AIE
Sbjct: 43 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIE 102
Query: 261 SIHNTDINGHTVKCFWGKES 280
++ T I G + W +
Sbjct: 103 KLNYTAIKGRPCRIMWSQRD 122
>gi|440893983|gb|ELR46563.1| Polyadenylate-binding protein 4-like protein [Bos grunniens mutus]
Length = 370
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 156/345 (45%), Gaps = 44/345 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDRSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTN 181
+ +++ D S+GYAFV F + A+ AI MNG L R + +RK
Sbjct: 125 LSSKVMSDDHG--SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREAEF 182
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-- 239
+ K +H T VY FG ++++E +++VFS +G + ++V
Sbjct: 183 QNK---AHEFT---------------NVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTD 224
Query: 240 ---KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ 296
K KG+ FV F + E A A+E ++ DING + F G+ AQ A +
Sbjct: 225 SSGKSKGFGFVSFDSHEAAKRAVEEMNGKDINGQLL--FVGR--------AQKKAERQAE 274
Query: 297 PNSTAPQFPY--IYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
Q + Q Y + T +L ++F +G +
Sbjct: 275 LKQMFEQLKHERFRRCQGAKLYIKNLDETIDDEKLRREFSSFGSI 319
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 130/272 (47%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 99 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMN 158
Query: 68 KRVFLEKEMKVNWASSPGNQPK--QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + + V S ++ Q+ ++ + ++++ + E++ + L E F+ +G+ +
Sbjct: 159 GALLKDCRLFVGRFKSRKDREAEFQNKAHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K E K
Sbjct: 219 VKVMTDSSG-KSKGFGFVSFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQA-ELK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ K F +Y + +++E + + FS FG+I ++V +E
Sbjct: 277 QMFEQLKHERF------RRCQGAKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGR 330
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 331 SKGFGLICFSSAEEATKAM-----TEMNGRIL 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A+
Sbjct: 190 TNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKRAVEE 249
Query: 66 MNKRVFLEKEMKVNWASSPGNQP---KQDTSNHYH----------IFVGDLSPEIETQTL 112
MN + + + V A + KQ H +++ +L I+ + L
Sbjct: 250 MNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNLDETIDDEKL 309
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ F+ FG IS +++++ +SKG+ + F EA A+T MNG+ LGS+
Sbjct: 310 RREFSSFGSISRVKVMQEEG--RSKGFGLICFSSAEEATKAMTEMNGRILGSK 360
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV++E G + + F A A+
Sbjct: 291 QGAKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFGLICFSSAEEATKAMT 350
Query: 65 AMNKRVFLEKEMKVNWASSP 84
MN R+ K + + A P
Sbjct: 351 EMNGRILGSKPLNIALAQKP 370
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L + G V KVIR ++ Y F+EF A L
Sbjct: 62 TLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQT 121
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + + ++NWA+ + + D S + IFVGDL+ ++ L+E F A + I
Sbjct: 122 YNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSI 181
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A+T M G +R +R ++ K P+ ++
Sbjct: 182 KGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPASNKNPSTQSQ 241
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
K + + N+ P N T++ G ++ ++ + +VF +G +V +++ K
Sbjct: 242 PKASYQNPQG-----AQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGK 296
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
FV+F + A A+ ++ T + G V+ WG+ N AQP A
Sbjct: 297 RCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQ--AQPDA 343
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ LL F P +KG KV+ R G Y F+ F +
Sbjct: 149 DDSPDHTIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESE 208
Query: 59 AATALAAMNKRVFLEKEMKVNWAS----SPGNQPK-----------QDTSNHYHIFVGDL 103
A+ M + + M++ AS S +QPK + N+ IFVG+L
Sbjct: 209 QVRAMTEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNL 268
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + L++ F +GE+ + +I K FV F ++ AE A+ +NG LG
Sbjct: 269 DPNVTDDHLRQVFGHYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTLLG 322
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 323 GQNVRLSWG-RSP 334
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VT++ L +F G + K+ P F++F + A AL +N
Sbjct: 261 TTIFVGNLDPNVTDDHLRQVFGHYGELVHVKI---PAGKRCGFVQFADRSCAEEALRVLN 317
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + ++++W SP N+ Q +N ++ G + +AP G+ N
Sbjct: 318 GTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSGGGYYGYAQGGYENYGYAPAGQDPN 374
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 19/287 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVK--GCKVIREPG---NDPYAFLEFVHHTVAATAL 63
TL+VG+L + + L F G VK K+IR ++ Y F+EF A L
Sbjct: 82 TLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKIL 141
Query: 64 AAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FG 120
+ N + E+ ++NWA+ + D + IFVGDL+ ++ L+E FA +
Sbjct: 142 HSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYP 201
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T +SKGY FV F + E A+ MNG + SR +R +T P +
Sbjct: 202 SVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT--PKKAS 259
Query: 181 NERKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
+++ +S + N TN T++ GG ++ +E + + FS FG
Sbjct: 260 GYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFG 319
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+V +++ KG FV+F + +A A++ ++ T I TV+ WG+
Sbjct: 320 EVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGR 366
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD VT+E L FSQ G V K+ P F++F + A AL
Sbjct: 291 DSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKI---PVGKGCGFVQFANRNSAEDAL 347
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
+N V ++ ++++W +P + Q + D++N ++
Sbjct: 348 QRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWN 382
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L F+ G + K+IR ++ Y F+EFV A AL
Sbjct: 14 TLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATAEHALKT 73
Query: 66 MNKRVF--LEKEMKVNWAS---SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-F 119
+N + ++NWAS G +N + +FVGDL PE+ L+E FA +
Sbjct: 74 LNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQETFAERY 133
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPA 178
+ N R+V DP T +SKG+ FV F + E + A+ MNG GSR +R + + RK
Sbjct: 134 PSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLAIPRKGVD 193
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
++ P N TV+ GG L E + F FG +V +++
Sbjct: 194 GVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVGGLDPTLTEPDLRTHFEAFGELVYVKI 253
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
KG FV+FT + A +I++++ T + V+ W
Sbjct: 254 PAGKGCGFVQFTRRADAEASIQALNGTMMGASRVRLSW 291
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
+ + + K T VY FG D+++E + ++FS +G + ++V
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP 226
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 227 SGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMV--FVGR 265
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP + KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTDP-SGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 35/230 (15%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G KV+ +P + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANQAVED 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+ RK +TN+ ++ + + + + + NQ P GG+
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPA-----AGGY 408
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 18/290 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G V KVIR ++ Y F+EF A L
Sbjct: 102 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQN 161
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
N + ++ ++NWA+ S G + D ++ IFVGDL+ ++ L+E FA +
Sbjct: 162 YNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSS 221
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
I ++V D T +SKGY FV F + E A+T MNG + SR +R +T P
Sbjct: 222 IKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVAT--PKKTYG 279
Query: 182 ERKRQNSHTKTITFDEVYN---------QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
+++ +S + N + N T++ GG D ++E + + F FG
Sbjct: 280 YQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFGE 339
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+V +++ KG FV+F ++ A AI +++ T I TV+ WG+ N
Sbjct: 340 VVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGN 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD ++E L F Q G V K+ P F++F A A+ A+N
Sbjct: 314 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKI---PVGKGCGFVQFADRKNAEEAIHALN 370
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSN 94
V ++ ++++W SPGN+ + SN
Sbjct: 371 GTVIGKQTVRLSWGRSPGNKHWRSDSN 397
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 19/293 (6%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTV 58
C+E++ T++VG+L + E L + F G V KVIR ++ Y F+EF H
Sbjct: 100 CEENK--TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGS 157
Query: 59 AATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A AL V ++ K+NWAS + + + ++ Y IFVGDL+ ++ + L E F
Sbjct: 158 AEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELF 217
Query: 117 A-PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
A + + +++ D T +S+GY FV F + +A+T MNG + +R IR +T
Sbjct: 218 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPAT-- 275
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P ++ ++ ++ TN TVY GG +++E+ + K F+ +G +
Sbjct: 276 -PRRSSGDSGSSTPG--------HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 326
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ K FV+F ++ A A++ ++ + I V+ WG+ + + A
Sbjct: 327 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 379
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 19/293 (6%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTV 58
C+E++ T++VG+L + E L + F G V KVIR ++ Y F+EF H
Sbjct: 100 CEENK--TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGS 157
Query: 59 AATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A AL V ++ K+NWAS + + + ++ Y IFVGDL+ ++ + L E F
Sbjct: 158 AEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELF 217
Query: 117 A-PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
A + + +++ D T +S+GY FV F + +A+T MNG + +R IR +T
Sbjct: 218 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPAT-- 275
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P ++ ++ ++ TN TVY GG +++E+ + K F+ +G +
Sbjct: 276 -PRRSSGDSGSSTPG--------HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 326
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ K FV+F ++ A A++ ++ + I V+ WG+ + + A
Sbjct: 327 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 379
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 135/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG I +V E
Sbjct: 279 KFEQLKQERL------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G KV+ +P + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERLSRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGAITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQP 403
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL+VG+L + E L F+ G + KVIR + Y F+EF H A L
Sbjct: 94 TLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQT 153
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
+ E+ ++NWA+ S G+ + D IFVGDL+ ++ L E F+ +
Sbjct: 154 YAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPS 213
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ ++V D T +SKGY FV F E A+ MNG + SR++R +T + +
Sbjct: 214 VKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGYQ 273
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ + N D TN T++ GG E + + FS +G IV +++
Sbjct: 274 QGGQSNGTPSQSDTDS-------TNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVG 326
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK-------ESENNSTLAQPSAPTT 294
KG FV+F + A A++ ++ T + TV+ WG+ SE S P+
Sbjct: 327 KGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSEFGSPWNGPAYYGG 386
Query: 295 PQPNSTAPQFPYIYNQQMGYWYPQAAAY 322
P + P+ Y+Q M AAAY
Sbjct: 387 PAYDGYGYAMPHPYDQSM-----YAAAY 409
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 36/251 (14%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L FA GEI + +++R+ QT +++GY FV F AE +
Sbjct: 95 LWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQTY 154
Query: 158 NGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
G + + + R NW+T T + KR D V + +++ G
Sbjct: 155 AGMLMPNTEQPFRLNWATFS----TGDHKRS---------DNV------PDLSIFVGDLA 195
Query: 216 KDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDIN 268
D+ + ++ + FS + D + KGY FV+F + A+ ++ +
Sbjct: 196 ADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCS 255
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQ 328
++ +++ + TP + T I+ +G P +ATA
Sbjct: 256 SRAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIF---VGGLDP-----SATAED 307
Query: 329 LPQQFYQYGQL 339
L Q F QYG++
Sbjct: 308 LRQPFSQYGEI 318
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD S T E L FSQ G + K+ P F++F + A AL
Sbjct: 288 DSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEEAL 344
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N ++ ++++W +P N+
Sbjct: 345 QKLNGTTVGKQTVRLSWGRNPANK 368
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 37/295 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL FS +GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN K +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDTIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D Q S+GYAFV F + A+ AI MNG L + +
Sbjct: 125 LSSKVMSDDQG--SRGYAFVHFQNQMAADRAIEEMNGALLKDCRL----------FVGRF 172
Query: 183 RKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-- 239
+ RQ+ E+ N+++ TN +Y FG D++++ + +VFS +G V ++V
Sbjct: 173 KNRQDREA------ELQNKANEFTN--IYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTD 224
Query: 240 ---KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K++E + L Q
Sbjct: 225 STGKSKGFGFVSFYSHEAAQKAVEEMNGKDINGQLL--FVGRAQKKAERQAELKQ 277
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQMAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPK----QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
+ K+ ++ Q + Q+ +N + +I++ + +++ + L+E F+ +G+
Sbjct: 160 ALL--KDCRLFVGRFKNRQDREAELQNKANEFTNIYIKNFGDDMDDKRLEEVFSKYGKTV 217
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D T KSKG+ FVSF A+ A+ MNG+ + + + + +K E
Sbjct: 218 SVKVMTDS-TGKSKGFGFVSFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQA-EL 275
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
K+ K F +Y +++E + + FS FG+I ++V KE
Sbjct: 276 KQMFEQQKQERF------RRCQGVKLYIKNLDDTIDDEKLRREFSSFGSISRVKVMKEEG 329
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 330 RSKGFGLICFSSPEEATRAM-----TEMNGRIL 357
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS+ G KV+ + + + F+ F H A A+
Sbjct: 190 TNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFVSFYSHEAAQKAVEE 249
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN + +F+ E++ ++ Q + +++ +L I+ + L
Sbjct: 250 MNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLDDTIDDEKL 309
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ F+ FG IS +++++ +SKG+ + F EA A+T MNG+ LGS+
Sbjct: 310 RREFSSFGSISRVKVMKEEG--RSKGFGLICFSSPEEATRAMTEMNGRILGSK 360
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV++E G + + F A A+
Sbjct: 291 QGVKLYIKNLDDTIDDEKLRREFSSFGSISRVKVMKEEGRSKGFGLICFSSPEEATRAMT 350
Query: 65 AMNKRVFLEKEMKVNWASS 83
MN R+ K + + A S
Sbjct: 351 EMNGRILGSKPLNIALAQS 369
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 135/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KSKG+ FVSF K +A A+ MNG+ + + + + +K ++R
Sbjct: 221 KVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRR 279
Query: 186 QNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
F+++ + S +Y +++E + K FSPFG+I +V E
Sbjct: 280 ---------FEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G KV+ +P + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRRF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQP 403
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 21/283 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + ++ Q+G K+IR+ GN Y F++F AA AL
Sbjct: 44 TTLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSGNAGYCFVDFSSPAAAAKALTL 103
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ + K+NWAS G ++D Y IFVGDL PE+ L F + F
Sbjct: 104 NATPIPGSSRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSC 163
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 164 KSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTATPK------- 216
Query: 183 RKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
K+ T NQ + P N TV+ GG + E+ + F FG I +++
Sbjct: 217 -------NKSATGGPPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPG 269
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 270 KGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNS 311
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREP---GNDPYAFLEFVHHTV 58
D +++VG+L V E +L +LF S+ K K++ +P + Y F+ F
Sbjct: 131 DRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMD 190
Query: 59 AATALAAMNKRVFLEKEMKVNWA-----SSPGNQPKQDTS--NHYHIFVGDLSPEIETQT 111
AL M + M+++ A S+ G P + N+ +FVG LS +
Sbjct: 191 QQRALTEMQGVYCGNRPMRISTATPKNKSATGGPPMNQFTDPNNTTVFVGGLSGYVTEDE 250
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
L+ F FGEI+ +I KG FV FV++ AE AI M G +G+ +R +W
Sbjct: 251 LRSFFQGFGEITYVKIP------PGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 304
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 135/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTD-SSGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ + AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPDEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ PT
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPT 404
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 19/293 (6%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTV 58
C+E++ T++VG+L + E L + F G V KVIR ++ Y F+EF H
Sbjct: 61 CEENK--TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGS 118
Query: 59 AATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A AL V ++ K+NWAS + + + ++ Y IFVGDL+ ++ + L E F
Sbjct: 119 AEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELF 178
Query: 117 A-PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
A + + +++ D T +S+GY FV F + +A+T MNG + +R IR +T
Sbjct: 179 ANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPAT-- 236
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P ++ ++ ++ TN TVY GG +++E+ + K F+ +G +
Sbjct: 237 -PRRSSGDSGSSTPG--------HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVAS 287
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+++ K FV+F ++ A A++ ++ + I V+ WG+ + + A
Sbjct: 288 VKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 340
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L TE+LL FS GPV ++ R+ YA++ F+ A AL
Sbjct: 123 SLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDT 182
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN K +++ W+ K N + + +L ++ +TL E F+ FG I +
Sbjct: 183 MNFDAVEGKPIRLMWSQRDACLRKSGVGN---VIIKNLDRSVDNKTLYEHFSGFGRILSS 239
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D Q SKGYAFV F ++ A+ AI MNG+ + R + P + +
Sbjct: 240 KVMSDDQG--SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLV------APFRSRRDRE 291
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
T+T F TN VY FG+D+++E + VFS +G + ++V K
Sbjct: 292 AELRTRTSEF---------TN--VYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGK 340
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
KG+ FV F + E A A+E ++ DING V F G K+ E + L Q
Sbjct: 341 SKGFGFVSFDSHEAAKKAVEEMNGKDINGQLV--FVGRAQKKEERQAELKQ 389
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+ + NLD SV + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 212 VIIKNLDRSVDNKTLYEHFSGFGRILSSKVMSDDQGSKGYAFVHFQSQSAADCAIQEMNG 271
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+V ++++ V S ++ + TS +++V + +++ + L+ F+ +G +
Sbjct: 272 KVIRDRQVLVAPFRSRRDREAELRTRTSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSV 331
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF A+ A+ MNG+ + + + + +K +
Sbjct: 332 KVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKK--------EE 382
Query: 186 QNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + K + F+E+ + C +Y ++++ + + FS FG+I ++V +E
Sbjct: 383 RQAELKQV-FEEL-KRDGARRCQGVKLYIKNLDDTVDDDRLRRAFSSFGSISRVKVMEEE 440
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ V F++ E A A+ T +NG +
Sbjct: 441 GQRKGFGLVCFSSPEEAAKAM-----TQMNGRVL 469
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +YV N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 299 SEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKA 358
Query: 63 LAAMNKR------VFLEKEMKVNWASSPGNQP----KQDTSNH---YHIFVGDLSPEIET 109
+ MN + VF+ + K + Q K+D + +++ +L ++
Sbjct: 359 VEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNLDDTVDD 418
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
L+ AF+ FG IS +++ + + KG+ V F EA A+T MNG+ LGS+ +
Sbjct: 419 DRLRRAFSSFGSISRVKVMEEEG--QRKGFGLVCFSSPEEAAKAMTQMNGRVLGSKPLNI 476
Query: 170 NWSTRK 175
+ R+
Sbjct: 477 ALAKRQ 482
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 36/310 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN--------DPYAFLEFVHHTVAA 60
TL++G+++ EE + ++++ KVI+ N Y F+EF A
Sbjct: 29 TLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGYCFVEFETPEDAK 88
Query: 61 TALAAMNKRVF---LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF- 116
AL +N + +K ++NWAS+ + + Y +FVGDLSP L F
Sbjct: 89 EALK-LNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSPATTEAHLLALFQ 147
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
F + R++ DP T S+ + FV F + + A+ MNG+WL R IR +T
Sbjct: 148 THFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDGRLIRVALAT--- 204
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQ-----------------SSPTNCTVYCGGFGKDLN 219
P N++ R+ H + D + S PTN TV+ GG ++
Sbjct: 205 PKHQNQQFRK--HQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTVFVGGLSNNIT 262
Query: 220 EELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
E + +F P+G IV ++V KG FVKFT + A AIE + I+G V+ WG+
Sbjct: 263 EATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQGYVIDGSRVRLSWGR- 321
Query: 280 SENNSTLAQP 289
S N LA P
Sbjct: 322 SNRNHLLAAP 331
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K +G+ FV + E A A+E ++ T++NG TV F G+ + N A+
Sbjct: 228 GKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTV--FVGRAQKKNERQAE 275
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KS+G+ FVS+ K +A A+ MNG L +++ + +K NER+
Sbjct: 221 KVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKK-----NERQA 274
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ + E ++ N +Y +++E + K FSPFG+I +V E
Sbjct: 275 ELKRKFEMLKQERISRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + G KV+ +P + F+ + H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 66 MN------KRVFLEKEMKVNWASSPGNQP----KQDTSNHY---HIFVGDLSPEIETQTL 112
MN K VF+ + K N + + KQ+ + Y ++++ +L I+ + L
Sbjct: 251 MNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 311 RKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTN 206
RK +TN+ ++ + + + + + NQ PT+
Sbjct: 369 QRKEERKAHLTNQYMQRIAGMRAMPANTIINQFQPTS 405
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 24/312 (7%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E L + F G V KVIR ++ Y F+EF H A L + + +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNTD 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEISNCRIVRDPQ 132
+ ++NWAS + D+++ + IFVGDL+ ++ TL EAF+ + + ++V D
Sbjct: 61 QPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDAN 120
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T +SKGY FV F +E A+T MNG + SR +R +T + + T+ + +
Sbjct: 121 TGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARS-- 178
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
+ TN TV+ GG +++EE + + FS +G I +++ K FV+F +
Sbjct: 179 -------DGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQR 231
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNSTAPQF--PYIYNQ 310
+ A A++ ++ + I V+ WG+ N Q Q N+ + P YN
Sbjct: 232 KNAEDALQGLNGSTIGKQNVRLSWGRNPANK----QFRGDNGNQWNNGGMYYAAPPFYN- 286
Query: 311 QMGYWYPQAAAY 322
GY YP AA +
Sbjct: 287 --GYGYPAAAPF 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+EE L FSQ G + K+ P F++F A AL +N
Sbjct: 186 TTVFVGGLDPNVSEEDLRQTFSQYGEISSVKI---PIGKQCGFVQFAQRKNAEDALQGLN 242
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ ++++W +P N Q + D N ++
Sbjct: 243 GSTIGKQNVRLSWGRNPANKQFRGDNGNQWN 273
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K +G+ FV + E A A+E ++ T++NG TV F G+ + N A+
Sbjct: 228 GKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTV--FVGRAQKKNERQAE 275
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KS+G+ FVS+ K +A A+ MNG L +++ + +K NER+
Sbjct: 221 KVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKK-----NERQA 274
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ + E ++ N +Y +++E + K FSPFG+I +V E
Sbjct: 275 ELKRKFEMLKQERISRYQGVN--LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + G KV+ +P + F+ + H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 66 MN------KRVFLEKEMKVNWASSPGNQP----KQDTSNHY---HIFVGDLSPEIETQTL 112
MN K VF+ + K N + + KQ+ + Y ++++ +L I+ + L
Sbjct: 251 MNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 311 RKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTN 206
RK +TN+ ++ + + + + + NQ PT+
Sbjct: 369 QRKEERKAHLTNQYMQRIAGMRAMPANTIINQFQPTS 405
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 25/296 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G V KVIR ++ Y F+EF +A L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 66 MNKRVF--LEKEMKVNWAS-----SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
N + ++ ++NWA+ G + + ++ +FVGDL+ ++ L+E FA
Sbjct: 177 FNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETFAS 236
Query: 119 -FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F I ++V D T +SKGY FV F ++E A+T MNG + SR +R +T P
Sbjct: 237 KFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVAT---P 293
Query: 178 AMTNERKRQNS-----------HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
T +Q S H+ ++ N T++ GG D+++E + +
Sbjct: 294 KKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQP 353
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
F FG ++ +++ KG FV+ ++ A AI+ ++ T I TV+ WG+ N
Sbjct: 354 FLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGN 409
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +++E L F Q G V K+ P F++ A A+
Sbjct: 330 DSNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKI---PVGKGCGFVQLADRKNAEEAI 386
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N V ++ ++++W SPGN+
Sbjct: 387 QGLNGTVIGKQTVRLSWGRSPGNK 410
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 13/280 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 81 TVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQN 140
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ E+ ++NWA+ + D IFVGDL+ ++ L E F + +
Sbjct: 141 YAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSV 200
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F E A+T MNG + SR +R +T + + +
Sbjct: 201 KAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQ 260
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
+ N + +++ TN T++ GG ++ E + + FS +G IV +++ K
Sbjct: 261 GSQSNGTSSQ-------SEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGK 313
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
G FV+F + A A++ ++ T I V+ WG+ N
Sbjct: 314 GCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRSPAN 353
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +VT E L FSQ G + K+ P F++F + A AL
Sbjct: 274 DSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEEAL 330
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N ++ ++++W SP N+
Sbjct: 331 QKLNGTTIGKQMVRLSWGRSPANK 354
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAAT 61
E+ LYVGNLD S+TE+LL F GP++ K+I + N+ YAF+E++ A
Sbjct: 54 ETSDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKNEYVNYAFVEYIRSHDANV 113
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N K +K+NWA Q + + +++FVGDL+ +++ +TL F F
Sbjct: 114 ALQTLNGVQLENKTLKINWAFE--TQQAAENDDTFNLFVGDLNVDVDDETLAGTFREFPT 171
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
++ D QT +S+GY FVSF + EA+ A+ AM G+ L R IR NW+T++ M N
Sbjct: 172 FIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKRERNMGN 231
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 29/192 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I N +I+ D + + YAFV +++ +A A+ +
Sbjct: 60 LYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKN-EYVNYAFVEYIRSHDANVALQTL 118
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG L +++++ NW+ A N D+ +N ++ G D
Sbjct: 119 NGVQLENKTLKINWAFETQQAAEN--------------DDTFN--------LFVGDLNVD 156
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E ++ F F T + D++ + +GY FV F+ +E A A++++ D++G
Sbjct: 157 VDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQ 216
Query: 272 VKCFWGKESENN 283
++ W + E N
Sbjct: 217 IRINWATKRERN 228
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 195 FDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKET 254
+++ ++ P T Y G E + + FG I+D + EKG F+K+ T E
Sbjct: 303 IEDMIRRAPPRVTTAYIGNIPHYATEADLIPLLQNFGFILDFTHYPEKGCCFIKYDTHEQ 362
Query: 255 ATHAIESIHNTDINGHTVKCFWGKESEN 282
A I ++ N G ++ WGKE N
Sbjct: 363 AAVCIVALANFPFQGRNLRTGWGKERTN 390
>gi|159163531|pdb|1X4G|A Chain A, Solution Structure Of Rrm Domain In Nucleolysin Tiar
Length = 109
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 73/94 (77%)
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAF 246
+ +TK + F++V NQSSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+F
Sbjct: 6 SGNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 65
Query: 247 VKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
V+F+T E+A HAI S++ T I GH VKC+WGKES
Sbjct: 66 VRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 99
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++
Sbjct: 28 VYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSV 81
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTN 181
NG + ++ W ++ P MT+
Sbjct: 82 NGTTIEGHVVKCYWG-KESPDMTS 104
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 25/296 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G V KVIR ++ Y F+EF +A L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 66 MNKRVF--LEKEMKVNWAS-----SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP 118
N + ++ ++NWA+ G + + ++ +FVGDL+ ++ L+E FA
Sbjct: 177 FNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETFAS 236
Query: 119 -FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F I ++V D T +SKGY FV F ++E A+T MNG + SR +R +T P
Sbjct: 237 KFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVAT---P 293
Query: 178 AMTNERKRQNS-----------HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
T +Q S H+ ++ N T++ GG D+++E + +
Sbjct: 294 KKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQP 353
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
F FG ++ +++ KG FV+ ++ A AI+ ++ T I TV+ WG+ N
Sbjct: 354 FLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGN 409
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +++E L F Q G V K+ P F++ A A+
Sbjct: 330 DSNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKI---PVGKGCGFVQLADRKNAEEAI 386
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N V ++ ++++W SPGN+
Sbjct: 387 QGLNGTVIGKQTVRLSWGRSPGNK 410
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 19/283 (6%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTV 58
C+E++ T++VG+L + E L + F G V KVIR + Y F+EF H
Sbjct: 100 CEENK--TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHAS 157
Query: 59 AATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A AL ++ K+NWAS + + + + + IFVGDL+ ++ + L E F
Sbjct: 158 ADKALQNFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELF 217
Query: 117 AP-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
A + + +++ D T +S+GY FV F + ++ A+T MNG + +R IR
Sbjct: 218 ASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIG----- 272
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
PA T R +S + T ++ TN TVY GG +++E+ + K F+ +G +
Sbjct: 273 -PA-TPRRTAGDSGSSTPG----HSDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVAS 326
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+++ + K FV++ + A A++ ++ + I V+ WG+
Sbjct: 327 VKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGR 369
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 16/270 (5%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E L + F G V KVIR ++ Y F+EF H A L + +
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTD 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEISNCRIVRDPQ 132
+ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + + ++V D
Sbjct: 61 QPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDAN 120
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T +SKGY FV F E +A+T MNG + +R +R +T R+ S T
Sbjct: 121 TGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPAT----------PRKTSGTSG 170
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
T + TN TV+ GG +++E+ + + FS +G I +++ K FV+F +
Sbjct: 171 PTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQR 230
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ A A++ ++ + I TV+ WG+ N
Sbjct: 231 KNAEDALQGLNGSTIGKQTVRLSWGRNPAN 260
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+E+ L FSQ G + K+ P F++FV A AL +N
Sbjct: 185 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKI---PVGKQCGFVQFVQRKNAEDALQGLN 241
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ ++++W +P N Q + D + ++
Sbjct: 242 GSTIGKQTVRLSWGRNPANKQLRSDNGSQWN 272
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 20/291 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T+++G+L + E L F+ G V KVIR ++ Y F+EF A L
Sbjct: 101 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVLQN 160
Query: 66 MNKRVF--LEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGE 121
N + ++ ++NWA+ S G + D ++ IFVGDL+ ++ L++ FA +
Sbjct: 161 YNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRYSS 220
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
I ++V D T +SKGY FV F + E A+T MNG + SR +R +T P T
Sbjct: 221 IKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVAT---PKKTY 277
Query: 182 ERKRQNSHTKTI----------TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFG 231
++Q S + +++ N T++ GG D ++E + + F FG
Sbjct: 278 GFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFG 337
Query: 232 TIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+V +++ KG FV+F ++ A AI+ ++ T I TV+ WG+ N
Sbjct: 338 EVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGN 388
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD ++E L F Q G V K+ P F++F A A+ +N
Sbjct: 313 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKI---PVGKGCGFVQFADRKNAEEAIQGLN 369
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSN 94
V ++ ++++W SPGN+ + SN
Sbjct: 370 GTVIGKQTVRLSWGRSPGNKHWRSDSN 396
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 161/345 (46%), Gaps = 44/345 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE++L F+ +GPV ++ R+ + YA++ F+ A A
Sbjct: 8 RAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+PFG+I
Sbjct: 68 LDTMNFDLIQGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSPFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
+ +++ D + S+GY FV + ++ A+ AI MNG+ L ++ + + +RK
Sbjct: 125 LSSKVMSDEEG--SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKD----- 177
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ +KT F TN VY G ++++E + +FS +G + ++V K+
Sbjct: 178 --REAELRSKTSEF---------TN--VYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKD 224
Query: 242 -----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ 296
KG+ FV F E A +A+E ++ DING T+ F G+ AQ +
Sbjct: 225 DNGKSKGFGFVSFYNHEAARNAVEEMNGQDINGQTI--FVGR--------AQKKVERQAE 274
Query: 297 PNSTAPQFP--YIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
Q I +Q Y + T L ++F +G +
Sbjct: 275 LKEKFEQMKKERIRARQAAKLYIKNLDETIDDETLRREFSSFGSI 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 20/251 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + KV+ E G+ Y F+ + + A A+ MN
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSPFGKILSSKVMSDEEGSRGYGFVHYQDQSAADRAIEEMN 158
Query: 68 KRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
++ + + V+ S ++ + TS ++++ +L ++ + LK F+ +G+ +
Sbjct: 159 GKLLRDCTVFVDRFKSRKDREAELRSKTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
++++D KSKG+ FVSF A NA+ MNGQ + ++I + +K ++
Sbjct: 219 VKVMKDDNG-KSKGFGFVSFYNHEAARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKE 277
Query: 185 RQNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ F+++ + + +Y + +++E + + FS FG+I ++V +E
Sbjct: 278 K---------FEQMKKERIRARQAAKLYIKNLDETIDDETLRREFSSFGSICRVKVMQEA 328
Query: 242 ---KGYAFVKF 249
KG+ + F
Sbjct: 329 GQSKGFGLICF 339
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ NL ++ +E L +FS+ G KV+++ + F+ F +H A A
Sbjct: 187 SEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSKGFGFVSFYNHEAARNA 246
Query: 63 LAAMN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI 107
+ MN K+V + E+K + + + +++ +L I
Sbjct: 247 VEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIR--ARQAAKLYIKNLDETI 304
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ +TL+ F+ FG I CR+ + +SKG+ + F A A+ MNG+ LGS+++
Sbjct: 305 DDETLRREFSSFGSI--CRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSKAL 362
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR ++ Y F+EF A L
Sbjct: 66 TLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQT 125
Query: 66 MNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N + + ++NWA+ + + D S + IFVGDL+ ++ L+E F A +
Sbjct: 126 YNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSA 185
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T ++KGY FV F ++E A++ M G +R +R ++ K P+ ++
Sbjct: 186 KGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGPASNKNPSTQSQ 245
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
K + + N+ P N T++ G ++ ++ + +VF +G +V +++ K
Sbjct: 246 PKASYQNPQG-----AQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGK 300
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSA 291
FV+F + A A+ ++ T + G V+ WG+ N AQP A
Sbjct: 301 RCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQ--AQPDA 347
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGN-DPYAFLEFVHHTV 58
D+S T++VG+L VT+ LL F P KG KV+ R G Y F+ F +
Sbjct: 153 DDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESE 212
Query: 59 AATALAAMNKRVFLEKEMKVNWAS----SPGNQPK-----------QDTSNHYHIFVGDL 103
A++ M + + M++ AS S +QPK + N+ IFVG+L
Sbjct: 213 QVRAMSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNL 272
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
P + L++ F +GE+ + +I K FV F ++ AE A+ +NG LG
Sbjct: 273 DPNVTDDHLRQVFGQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTLLG 326
Query: 164 SRSIRTNWSTRKP 176
+++R +W R P
Sbjct: 327 GQNVRLSWG-RSP 338
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VGNLD +VT++ L +F Q G + K+ P F++F + A AL +N
Sbjct: 265 TTIFVGNLDPNVTDDHLRQVFGQYGELVHVKI---PAGKRCGFVQFADRSCAEEALRVLN 321
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
+ + ++++W SP N+ Q +N ++
Sbjct: 322 GTLLGGQNVRLSWGRSPSNKQAQPDANQWN 351
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 18/298 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATA 62
Q TTL++G L+ VTE + +++ +G K+IR N Y F+EF A++A
Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150
Query: 63 LAAMNKRVFLEKEM-KVNWASSPGNQPKQ-DTSNHYHIFVGDLSPEIETQTLKEAFAP-F 119
++ NK + + K+NWAS G + K ++ Y IFVGDLSP + + FA +
Sbjct: 151 MSMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRY 210
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
+ +I+ DPQT S+GY FV F + + ++A+ M GQ G R IR +T P +
Sbjct: 211 NSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLAT--PKSK 268
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPT-------NCTVYCGGFGKDLNEELVSKVFSPFGT 232
+ N ++ Y+ + P N TV+ GG K ++EE + +F FG
Sbjct: 269 AHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGE 328
Query: 233 IVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS 290
IV +++ KG FV+F +++A AI + + ++ WG+ N + +A P+
Sbjct: 329 IVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGR---NQNPIAAPA 383
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 34/290 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
K KG+ FV F E A A++ ++ D+NG + K+ E + L +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAKKVERQTELKR 277
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF + +A+ A+ MNG+ + ++I + + +RK
Sbjct: 221 KVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAKKVERQTELKRKF 279
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 EQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 331
Query: 242 KGYAFVKFT 250
KG+ FV F+
Sbjct: 332 KGFGFVCFS 340
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGKSKGFGFVSFERHEDAQKAVDD 250
Query: 66 MN------KRVFLEKEMKVNWASSPGN---QPKQDTSNHY---HIFVGDLSPEIETQTLK 113
MN K +++ + KV + Q KQD Y +++V +L I+ + L+
Sbjct: 251 MNGKDMNGKAIYVGRAKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 310
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
+ F+PFG I++ +++ + +SKG+ FV F
Sbjct: 311 KEFSPFGTITSAKVMM--EGGRSKGFGFVCF 339
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E + + F V K+IR ++ Y F+EF H A L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWA+ + + + Y IFVGDL+ ++ L+E F + + +
Sbjct: 140 HNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFRSRYQTV 199
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+T MNG + SR +RT +T K
Sbjct: 200 KGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTK------- 252
Query: 183 RKRQNSHTKTITFDEVY--------------NQSSPTNCTVYCGGFGKDLNEELVSKVFS 228
KT F + Y + + P N T++ GG + +E++ ++F
Sbjct: 253 --------KTTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFG 304
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
FG +V +++ K FV+F + +A A++ +H T + ++ WG+ S N +
Sbjct: 305 QFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGR-SPANKQVQT 363
Query: 289 PS--APTTPQPNSTAPQFPYIYNQ--QMGYWY 316
P P P PN Y Y Q GY Y
Sbjct: 364 PGWVQPQQPDPNQWNGAAYYGYGQGYDAGYGY 395
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L LF Q G + K+ P F++F + A AL ++
Sbjct: 283 TTIFVGGLDPSVTDEMLRQLFGQFGELVHVKI---PVGKRCGFVQFNNRASAEEALQMLH 339
Query: 68 KRVFLEKEMKVNWASSPGN---------QPKQDTSNHYH 97
V ++ ++++W SP N QP+Q N ++
Sbjct: 340 GTVLGQQAIRLSWGRSPANKQVQTPGWVQPQQPDPNQWN 378
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 15/284 (5%)
Query: 9 TLYVGNLDVSVTEELLCALF-SQIGPVK--GCKVIREPGN---DPYAFLEFVHHTVAATA 62
T++VG+L + E L + F S G ++ KVIR N + Y F+EF H VA
Sbjct: 109 TIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFDSHDVADKV 168
Query: 63 LAAMNKRVFLEKE--MKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-P 118
L N + E ++NWAS S G + ++ IFVGDL+P++ L E F+
Sbjct: 169 LQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTLLHETFSEK 228
Query: 119 FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
+ + ++V D T +SKGY FV F + E A+T MNG SR++R +T P
Sbjct: 229 YPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT---PR 285
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
T ++Q + + N T++ GG + ++ + + FS FG IV +++
Sbjct: 286 KTTGYQQQGGYMPNGAL--TRPEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIVSVKI 343
Query: 239 FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG FV+F + +A A+E ++ T I TV+ WG+ N
Sbjct: 344 PVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQAN 387
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT++ L FS+ G + K+ P F++FV+ A AL +N
Sbjct: 312 TTIFVGGLDSSVTDDDLRQPFSEFGEIVSVKI---PVGKGCGFVQFVNRPSAEEALEKLN 368
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
V ++ ++++W + N QP+ N +
Sbjct: 369 GTVIGKQTVRLSWGRNQANKQPRDKYGNQW 398
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F H A +
Sbjct: 111 SLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTD 170
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ + K N +FV +L I ++L +AF+ FG I +C
Sbjct: 171 MNLYIIKGKPVRLMWSQRDPSLRKSGIGN---VFVKNLEKSINNKSLYDAFSSFGNILSC 227
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
+++ D SKGY FV F + AE AI MNG L I ++ +RK +
Sbjct: 228 KVITDDNG--SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRK-----DRES 280
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ T+ T VY FG+D++E+ +SK+F FG + ++V ++
Sbjct: 281 ELGAQTREFT-------------NVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCG 327
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F E A +AI++++ ++NG +
Sbjct: 328 RSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQI 360
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
++V NL+ S+ + L FS G + CKVI + G+ Y F+ F H A A+ MN
Sbjct: 200 VFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSKGYGFVHFEHRESAERAIQKMNG 259
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ + ++ V S ++ + T ++++ + +++ L + F FG +
Sbjct: 260 ILLNDLKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSV 319
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD +SKG+ FV+F K +A+NAI MNG+ L R I + +K T ++
Sbjct: 320 KVMRD-DCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQLQRH 378
Query: 186 --QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
Q + + + V +Y D+++E + K FS FGTI +V
Sbjct: 379 FEQLKQNRIVRYQGV---------NLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMNNG 429
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F+ E AT A+ T++NG V
Sbjct: 430 RSKGFGFVCFSAPEEATTAV-----TEMNGRLV 457
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 86 NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 145
N P S ++VGDL E+ L E F+P G I + R+ RD T +S GYA+V+F
Sbjct: 100 NVPNSPNSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQ 159
Query: 146 KKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPT 205
A+AE +T MN + + +R WS R P +S
Sbjct: 160 HLADAERVMTDMNLYIIKGKPVRLMWSQRDPS---------------------LRKSGIG 198
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIES 261
N V+ K +N + + FS FG I+ +V + KGY FV F +E+A AI+
Sbjct: 199 N--VFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSKGYGFVHFEHRESAERAIQK 256
Query: 262 IHNTDINGHTVKCFWG 277
++ +N +K F G
Sbjct: 257 MNGILLN--DLKIFVG 270
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + E+ L +F + GP KV+R+ + + F+ F H A A+
Sbjct: 290 TNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDN 349
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + +++ A Q KQ+ Y ++++ +L +I+ + L
Sbjct: 350 MNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENL 409
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+ FG I++ +++ + +SKG+ FV F EA A+T MNG+ + S+ + +
Sbjct: 410 RKEFSSFGTITSAKVMMN--NGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALA 467
Query: 173 TRK 175
RK
Sbjct: 468 QRK 470
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 198 VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
V N + T ++Y G ++ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 101 VPNSPNSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQH 160
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKE 279
A + ++ I G V+ W +
Sbjct: 161 LADAERVMTDMNLYIIKGKPVRLMWSQR 188
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD + +E L FS G + KV+ G + F+ F A TA+
Sbjct: 391 QGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMNNGRSKGFGFVCFSAPEEATTAVT 450
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 451 EMNGRLVASKPLYVALA 467
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 29/325 (8%)
Query: 15 LDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP--YAFLEFVHHTVAATALAAMNKRVF 71
L +V E L F+ G V K+IR E P Y F+EFV H A L N
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYNA--- 67
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRD 130
++ ++NWAS + + D + + IFVGDL+P+I L+E F A + + ++V D
Sbjct: 68 TDQTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSD 127
Query: 131 PQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHT 190
P T +SKGY FV F + E A+T MNG + +R +R + +T P T +
Sbjct: 128 PNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAAT---PKKTTSAYAAPAAP 184
Query: 191 KTITFDEVYNQSSPT-----------NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
V ++P N ++ G +++EE + + F FG IV ++V
Sbjct: 185 VPKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQ 244
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
KG FV+F T+ +A AI+ + I V+ WG+ + A+ P P
Sbjct: 245 SGKGCGFVQFGTRASAEEAIQKMQEKMIGQQVVRISWGR-----TLTARQDLPGGWGPQM 299
Query: 300 TAPQFPYIYNQQMGYWYPQAAAYTA 324
Q+ Y GY +A AY A
Sbjct: 300 DPNQWSAYYGYGQGY---EAYAYGA 321
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
T ++VGNLD++V+EE L F Q G + KV G F++F A A+ M
Sbjct: 212 TAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGC---GFVQFGTRASAEEAIQKMQ 268
Query: 68 KRVFLEKEMKVNWASS-------PGNQPKQDTSNHYHIFVG 101
+++ ++ ++++W + PG Q N + + G
Sbjct: 269 EKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSAYYG 309
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 141/292 (48%), Gaps = 36/292 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAA 65
+ +LYVG+L VTE+LL FS +GPV + P + YA++ F+ A AL
Sbjct: 8 RQASLYVGDLHADVTEDLLFKKFSAVGPV--LSITCHPRSLGYAYVNFLQLADAQKALDT 65
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ K N +F+ +L I+ +TL E F+ FG+I +
Sbjct: 66 MNFDLIKGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDRSIDNKTLYEHFSAFGKILSS 122
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTNERK 184
+++ D S+GYAFV F + A+ AI MNG L R + +RK + K
Sbjct: 123 KVMSDDHG--SRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREAEFQNK 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+H T VY FG ++++E + +VFS +G + ++V
Sbjct: 181 ---AHEFT---------------NVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSG 222
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F + E A A+E ++ DING + F G K++E + L Q
Sbjct: 223 KSKGFGFVSFDSHEAAKRAVEEMNGKDINGQLL--FVGRAQKKAERQAELKQ 272
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 95 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNG 154
Query: 69 RVFLEKEMKVNWASSPGNQPK--QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ + + V S ++ Q+ ++ + ++++ + E++ + LKE F+ +G+ +
Sbjct: 155 TLLKDCRLFVGRFKSRKDREAEFQNKAHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSV 214
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K E K+
Sbjct: 215 KVMTDSSG-KSKGFGFVSFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQA-ELKQ 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
K F +Y + +++E + + FS FG+I ++V +E
Sbjct: 273 MFEQLKHERF------RRCRGAKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEEGRS 326
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ E AT A+ T++NG +
Sbjct: 327 KGFGLICFSSAEEATKAM-----TEMNGRIL 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A+
Sbjct: 185 TNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKRAVEE 244
Query: 66 MNKRVFLEKEMKVNWASSPGNQP---KQDTSNHYH----------IFVGDLSPEIETQTL 112
MN + + + V A + KQ H +++ +L I+ + L
Sbjct: 245 MNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCRGAKLYIKNLDETIDDEKL 304
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
+ F+ FG IS +++++ +SKG+ + F EA A+T MNG+ LGS+
Sbjct: 305 RREFSSFGSISRVKVMQEEG--RSKGFGLICFSSAEEATKAMTEMNGRILGSK 355
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 5 SQP-TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
SQP T+LYVG LD +VTE +L +FS IGPV +V R+ YA++ +++ A
Sbjct: 53 SQPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAE 112
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL +N + K ++ W+ P + +IF+ +L I+ + L + FA FG
Sbjct: 113 RALEQLNYSLIKNKACRIMWSQ---RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 169
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I +C++ D T SKGY FV +V AE AI +NG L + + +
Sbjct: 170 DILSCKVAMD-STGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVFVGIHVPR----- 223
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-- 238
ER+ + + F +Y ++ PT T ++LNE +FS +G + V
Sbjct: 224 RERQAKIDEVRA-HFTNLYIKNLPTEVTT------EELNE-----MFSKYGPVTSAAVQA 271
Query: 239 ---FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV + E+A+ A+E++H+ D G+ +
Sbjct: 272 DESGKHRGFGFVNYENHESASKAVEALHDKDYKGNIL 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
+SP +QP +TS ++VG+L P + L E F+ G +S+ R+ RD T +S GYA+
Sbjct: 49 ASPASQP--NTS----LYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAY 102
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V+++ A+AE A+ +N + +++ R WS R P + RK + DE
Sbjct: 103 VNYLNAADAERALEQLNYSLIKNKACRIMWSQRDP----SLRKTGQGNIFIKNLDET--- 155
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETAT 256
++ + + F+ FG I+ +V + KGY FV + T E+A
Sbjct: 156 ----------------IDNKALHDTFAAFGDILSCKVAMDSTGASKGYGFVHYVTAESAE 199
Query: 257 HAIESIHNTDINGHTV 272
AI+ ++ +N V
Sbjct: 200 AAIKGVNGMQLNDKVV 215
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 22/186 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPG-NDPYAFLEFVHHTVAATALAA 65
T LY+ NL VT E L +FS+ GPV V E G + + F+ + +H A+ A+ A
Sbjct: 238 TNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHESASKAVEA 297
Query: 66 MNKRVF-------------LEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEIET 109
++ + + +E++ ++ A Q K +T+ Y ++++ +L E +
Sbjct: 298 LHDKDYKGNILYVARAQKRVERDAELRRAH---EQQKYETTLKYQGVNLYIKNLDDEYDD 354
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F PFG I++C++++D + + S+G+ FV F EA A+ MNG+ LGS+ +
Sbjct: 355 EKLQAEFLPFGTITSCKVMKDDKGV-SRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYV 413
Query: 170 NWSTRK 175
+ + RK
Sbjct: 414 SLAQRK 419
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 124/278 (44%), Gaps = 46/278 (16%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAM--- 66
+++ NLD ++ + L F+ G + CKV + + FVH+ A +A AA+
Sbjct: 147 IFIKNLDETIDNKALHDTFAAFGDILSCKVAMDSTGASKGY-GFVHYVTAESAEAAIKGV 205
Query: 67 ------NKRVFL-------EKEMKVNWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTL 112
+K VF+ E++ K++ + H+ ++++ +L E+ T+ L
Sbjct: 206 NGMQLNDKVVFVGIHVPRRERQAKID-----------EVRAHFTNLYIKNLPTEVTTEEL 254
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
E F+ +G +++ + D ++ K +G+ FV++ A A+ A++ + + +
Sbjct: 255 NEMFSKYGPVTSAAVQAD-ESGKHRGFGFVNYENHESASKAVEALHDKDYKGNILYVARA 313
Query: 173 TRKPPAMTNERK--RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
++ R+ Q + T+ + V +Y + ++E + F PF
Sbjct: 314 QKRVERDAELRRAHEQQKYETTLKYQGV---------NLYIKNLDDEYDDEKLQAEFLPF 364
Query: 231 GTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIH 263
GTI +V K+ +G+ FV F+ + AT A+ ++
Sbjct: 365 GTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMN 402
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETA 255
+S N ++Y G + E ++ ++FS G + IRV ++ GYA+V + A
Sbjct: 52 ASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADA 111
Query: 256 THAIESIHNTDINGHTVKCFW 276
A+E ++ + I + W
Sbjct: 112 ERALEQLNYSLIKNKACRIMW 132
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 128/275 (46%), Gaps = 36/275 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IFV +L I+++TL + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D SKGY FV F + EAE AI MNG +L R + + R R
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGR-------FKSRRDR 179
Query: 186 Q---NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
Q + K T VY G+D+++E + +FS FG + ++V
Sbjct: 180 QAELGARAKEFT-------------NVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDE 226
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ D+NG +
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQI 261
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 25/278 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 68 -----KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++VF+ + + + + + G + K+ T ++++ +L +++ + L++ F+ FG
Sbjct: 161 MFLNDRKVFVGRFKSRRDRQAELGARAKEFT----NVYIKNLGEDMDDERLQDLFSRFGP 216
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +++ D ++ KSKG+ FVSF + +A A+ MNG+ L + I + +K T
Sbjct: 217 ALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTE 275
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ + + E Q C +Y +++E + K FSPFGTI +V
Sbjct: 276 LKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 335
Query: 239 FKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ FV F++ E AT A+ T++NG V
Sbjct: 336 TMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 368
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ NL + +E L LFS+ GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPK-----QDTS---NHYHIFVGD 102
MN K+V + E+K + ++PK QD S +++V +
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKN 310
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L I+ + L++ F+PFG I++ ++ + +SKG+ FV F EA A+T MNG+ +
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIV 368
Query: 163 GSRSIRTNWSTRK 175
++ + + RK
Sbjct: 369 ATKPLYVALAQRK 381
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV++++ GYA V F E A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV E G + F+ F A A+
Sbjct: 302 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVT 361
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 362 EMNGRIVATKPLYVALA 378
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 163/360 (45%), Gaps = 52/360 (14%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L TE+LL FS GPV ++ R+ YA++ F+ A AL
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ + N +FV +L ++ +TL E F+ FG+I +
Sbjct: 71 MNFDVIKGRPIRLMWSQRDACLRRSGIGN---VFVKNLDRSVDNKTLYEHFSGFGKILSS 127
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D Q SKGYAFV F ++ A AI MNG+ + R + + KP RK
Sbjct: 128 KVMSDDQG--SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFV--APFKP------RKD 177
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+ + ++ S TN VY FG D+++E + VFS +G + ++V K
Sbjct: 178 REAELRS-------RASEFTN--VYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGK 228
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
KG+ FV F + E A A+E ++ D+NG V F G+ AQ +
Sbjct: 229 SKGFGFVSFESHEAAKRAVEEMNGKDMNGQLV--FVGR--------AQKKVERQAELKHM 278
Query: 301 APQFP--YIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL---------GYPQGYVGMV 349
Q I Q Y + T QL ++F +G + GY +G+ G++
Sbjct: 279 FEQMKKERIRRCQGVKLYVKNLDDTVDDEQLRKEFSSFGSITRVKVMKEEGYSRGF-GLI 337
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 37/279 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD SV + L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 100 VFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQSQSAANCAIEQMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPKQD--------TSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
+V ++ + V +P +P++D S ++++ + +++ + L+ F+ +G
Sbjct: 160 KVINDRPVFV----AP-FKPRKDREAELRSRASEFTNVYIKNFGDDMDDERLQGVFSRYG 214
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ + +++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K
Sbjct: 215 KTLSVKVMTDSSG-KSKGFGFVSFESHEAAKRAVEEMNGKDMNGQLVFVGRAQKKV---- 269
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
ER+ + H F+++ + C +Y +++E + K FS FG+I ++
Sbjct: 270 -ERQAELKHM----FEQM-KKERIRRCQGVKLYVKNLDDTVDDEQLRKEFSSFGSITRVK 323
Query: 238 VFKEKGYA----FVKFTTKETATHAIESIHNTDINGHTV 272
V KE+GY+ + F++ E A A+ T++NG +
Sbjct: 324 VMKEEGYSRGFGLICFSSPEEAAKAL-----TEMNGRVL 357
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L +FS+ G KV+ + + F+ F H A A
Sbjct: 187 SEFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGFGFVSFESHEAAKRA 246
Query: 63 LAAMNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET 109
+ MN + VF+ E++ ++ + + ++V +L ++
Sbjct: 247 VEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMKKERIRRCQGVKLYVKNLDDTVDD 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++ F+ FG I+ +++++ S+G+ + F EA A+T MNG+ LGS+++
Sbjct: 307 EQLRKEFSSFGSITRVKVMKEEGY--SRGFGLICFSSPEEAAKALTEMNGRVLGSKALSI 364
Query: 170 NWSTR 174
+ R
Sbjct: 365 ALAQR 369
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 9/277 (3%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E L + F+ G + KVIR ++ Y F+EF H A L + +
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEISNCRIVRDPQ 132
+ ++NWA+ + D IFVGDL+ ++ L E FA + + ++V D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T +SKGY FV F + E A+T MNG + SR +R +T P + +++ +SH
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSHGGY 178
Query: 193 ITFD-EVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTT 251
+ V + N T++ GG ++++E + + FS +G IV +++ KG FV+F
Sbjct: 179 ASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFAN 238
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
+ A A++ ++ T I TV+ WG+ N A
Sbjct: 239 RNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 190 DSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEDAL 246
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSNHY 96
+N V ++ ++++W +P N Q + D N +
Sbjct: 247 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQW 280
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV + E A A+E ++ T++NG TV F G+
Sbjct: 228 GKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTV--FVGR 265
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP KS+G+ FVS+ K +A A+ MNG L +++ + +K E KR
Sbjct: 221 KVMTDPSG-KSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + G KV+ +P + F+ + H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGFVSYEKHEDANKAVEE 250
Query: 66 MN------KRVFLEK---------EMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K VF+ + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGTELNGKTVFVGRAQKKMERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTN 206
+ RK +TN+ ++ + + + + + NQ PT+
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPTS 405
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
TL+VG+L + E + + F V K+IR ++ Y F+EF H A L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N E+ ++NWA+ + + + Y IFVGDL+ ++ L+E F + + +
Sbjct: 140 HNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFRSRYQTV 199
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
++V D T +SKGY FV F + E A+T MNG + SR +RT +T K T
Sbjct: 200 KGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTK--KTTGF 257
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
++ + V + + P N T++ GG + +E++ ++F FG +V +++ K
Sbjct: 258 QQPYPKAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGK 317
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPS--APTTPQPNST 300
FV+F + +A A++ +H T + ++ WG+ S N + P P P PN
Sbjct: 318 RCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGR-SPANKQVQTPGWVQPQQPDPNQW 376
Query: 301 APQFPYIYNQ--QMGYWY 316
Y Y Q GY Y
Sbjct: 377 NGAAYYGYGQGYDAGYGY 394
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD SVT+E+L LF Q G + K+ P F++F + A AL ++
Sbjct: 282 TTIFVGGLDPSVTDEMLRQLFGQFGELVHVKI---PVGKRCGFVQFNNRASAEEALQMLH 338
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ 90
V ++ ++++W SP N+ Q
Sbjct: 339 GTVLGQQAIRLSWGRSPANKQVQ 361
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++ + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTDPSG-KSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ + AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPDEATKAV-----TEMNGRIV 358
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + + L LFS+ G KV+ +P + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ PT
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPT 404
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+N+E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ F+ + E A A+E ++ T++NG TV F G+
Sbjct: 228 GKSRGFGFISYEKHEDANKAVEDMNGTELNGKTV--FVGR 265
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + ++ + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KS+G+ F+S+ K +A A+ MNG L +++ + +K +R
Sbjct: 221 KVMTDP-TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKK-------MER 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q + + S +Y +++E + K FSPFG+I +V E
Sbjct: 273 QAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + G KV+ +P + F+ + H A A+
Sbjct: 191 TNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFISYEKHEDANKAVED 250
Query: 66 MN------KRVF-------LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN K VF +E++ ++ Q + ++++ +L I+ + L
Sbjct: 251 MNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 311 RKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTN 206
RK +TN+ ++ + + + + + NQ PT+
Sbjct: 369 QRKEERKAHLTNQYMQRIAGMRAMPANTIINQFQPTS 405
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 153/354 (43%), Gaps = 62/354 (17%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATA 62
+ +LYVG+L VTE+LL F+ +GPV ++ R+ + Y ++ F+ A A
Sbjct: 8 RAASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQKA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ +TL E F+PFG+I
Sbjct: 68 LETMNFDLIKGKSIRLMWSQRDACLRKSGIGN---VFIKNLDKSIDNKTLYEHFSPFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL----------GSRSIRTNWS 172
+ +++ D + SKGY FV + + A+ AI MNG+ L SR R
Sbjct: 125 MSSKVMTDEEG--SKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREAEL 182
Query: 173 TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGT 232
KP TN VY FG D+++E + VFS +G
Sbjct: 183 REKPAEFTN---------------------------VYIKNFGDDMDDESLRSVFSKYGQ 215
Query: 233 IVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
+ ++V K+ K + FV F + + A +A+E ++ DING T+ F G+ A
Sbjct: 216 TLSVKVMKDASGKSKRFGFVSFDSHKAAKNAVEDMNGRDINGQTI--FVGR--------A 265
Query: 288 QPSAPTTPQPNSTAPQFP--YIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQL 339
Q + Q I +Q Y + T L ++F +G +
Sbjct: 266 QKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSI 319
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ E G+ Y F+ + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGKIMSSKVMTDEEGSKGYGFVHYQDQRAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
++ + + V S ++ ++ + ++++ + +++ ++L+ F+ +G+ +
Sbjct: 160 KLLRDSTLFVARFKSRKDREAELREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSV 219
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA------- 178
++++D KSK + FVSF A+NA+ MNG+ + ++I + +K
Sbjct: 220 KVMKDASG-KSKRFGFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEM 278
Query: 179 ---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
M ER R K +Y +++E + K FS FG+I
Sbjct: 279 FEQMKKERIRARQAAK-----------------LYIKNLDDTIDDETLRKEFSVFGSICR 321
Query: 236 IRVFKE----KGYAFVKF 249
++V +E KG+ + F
Sbjct: 322 VKVMQEAGQSKGFGLICF 339
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L ++FS+ G KV+++ + + F+ F H A A+
Sbjct: 190 TNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRFGFVSFDSHKAAKNAVED 249
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN R +F+ E++ ++ + + +++ +L I+ +TL
Sbjct: 250 MNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETL 309
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
++ F+ FG I CR+ + +SKG+ + F A A+ MNG+ LGS+
Sbjct: 310 RKEFSVFGSI--CRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSK 360
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++ + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTDPSG-KSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ + AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPDEATKAV-----TEMNGRIV 358
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + + L LFS+ G KV+ +P + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ PT
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPT 404
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 17/276 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR + + Y F+EF H A AL
Sbjct: 110 TIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQN 169
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ V ++ K+NWAS + + + S+ + IFVGDL+ ++ + L E F+ + +
Sbjct: 170 FSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRSV 229
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+++ D T +S+GY FV F + +A+T MNG + +R IR PA T
Sbjct: 230 KGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVG------PA-TPR 282
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R + +S + +V TN TVY GG +++E+ + K F+ +G + +++ K
Sbjct: 283 RSQGDSGSSPPRQSDV----DSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGK 338
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
FV+F + A A++ ++ I V+ WG+
Sbjct: 339 QCGFVQFVNRADAEEALQGLNGATIGKQAVRLSWGR 374
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFS-QIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
S +++VG+L V VT+E+L LFS + VKG KVI + + Y F+ F
Sbjct: 199 SSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 258
Query: 61 TALAAMNKRVFLEKEMKV----------NWASSPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
A+ MN + ++V + SSP Q D++N ++VG L P +
Sbjct: 259 HAMTEMNGVYCSTRPIRVGPATPRRSQGDSGSSPPRQSDVDSTNRT-VYVGGLDPNVSED 317
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++AFA +G++++ +I Q FV FV +A+AE A+ +NG +G +++R +
Sbjct: 318 ELRKAFAKYGDLASVKIPFGKQC------GFVQFVNRADAEEALQGLNGATIGKQAVRLS 371
Query: 171 WSTRKPPAMTNER 183
W + PA R
Sbjct: 372 WG--RSPASKQSR 382
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++ + ++FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING V F G+
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV--FVGR 265
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ LKE F+ +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP + KSKG+ FVSF K +A A+ MNG+ + + + + +K E KR
Sbjct: 221 KVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ + AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPDEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + + L LFS+ G KV+ +P + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ PT
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPT 404
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 19/277 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR + + Y F+EF H A AL
Sbjct: 105 TIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQN 164
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ V ++ K+NWAS + + + S+ + IFVGDL+ ++ L E F+ + +
Sbjct: 165 FSGHVMPNTDRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSV 224
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
+++ D T +S+GY FV F + +A+T MNG + +R IR +T R+ +
Sbjct: 225 KGAKVIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGDSG 284
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ SH + TN TVY GG +++E+ + K F+ +G + +++
Sbjct: 285 TSPPRQSHVDS------------TNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K FV+F + A A+ ++ + I V+ WG+
Sbjct: 333 KQCGFVQFVNRVDAEEALHGLNGSTIGKQAVRLSWGR 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFS-QIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
S +++VG+L V VT+ +L LFS + VKG KVI + + Y F+ F
Sbjct: 194 SSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKI 253
Query: 61 TALAAMNKRVFLEKEMKV----------NWASSPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
A+ MN + ++V + +SP Q D++N ++VG L P +
Sbjct: 254 HAMTEMNGVYCSTRPIRVGPATPRRSQGDSGTSPPRQSHVDSTNRT-VYVGGLDPNVSED 312
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++AFA +G++++ +I Q FV FV + +AE A+ +NG +G +++R +
Sbjct: 313 ELRKAFAKYGDLASVKIPFGKQC------GFVQFVNRVDAEEALHGLNGSTIGKQAVRLS 366
Query: 171 WSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
W + PA + + + + H + + +Y T + GG+G
Sbjct: 367 WG--RSPA-SKQSRGDSGHRRNGNCNGMY------YGTPFYGGYG 402
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IFV +L I+++ L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D SKGY FV F + EAE AI MNG +L R + + R R
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGR-------FKSRRDR 179
Query: 186 Q---NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
Q + K T VY G+D+++E + +FS FG + ++V
Sbjct: 180 QAELGARAKEFT-------------NVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDE 226
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ D+NG +
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQI 261
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 35/283 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDRSIDSKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 68 -----KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++VF+ + + + + + G + K+ T ++++ +L +++ + L+ F+ FG
Sbjct: 161 MFLNDRKVFVGRFKSRRDRQAELGARAKEFT----NVYIKNLGEDMDDERLQGLFSKFGP 216
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +++ D ++ KSKG+ FVSF + +A A+ MNG+ L + I + +K
Sbjct: 217 ALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKV----- 270
Query: 182 ERKRQNSHT-KTITFDEVYNQSSPTNCTVYCGG-------FGKDLNEELVSKVFSPFGTI 233
ER+ + H + D+ + P + +V C G +++E + K FSPFGTI
Sbjct: 271 ERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNLDDGIDDERLRKEFSPFGTI 330
Query: 234 VDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 TSAKVTMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 368
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ NL + +E L LFS+ GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPK-----QDTS---NHYHIFVGD 102
MN K+V + E+K + ++ K QD S +++V +
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKN 310
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L I+ + L++ F+PFG I++ ++ + +SKG+ FV F EA A+T MNG+ +
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIV 368
Query: 163 GSRSIRTNWSTRK 175
++ + + RK
Sbjct: 369 ATKPLYVALAQRK 381
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FS G I+ IRV++++ GYA V F E A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV E G + F+ F A A+
Sbjct: 302 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVT 361
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 362 EMNGRIVATKPLYVALA 378
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREPGNDP--YAFLEFVHHTVAA 60
E TTLYVGN+D SV+E++L LF +G ++ K++ + YAF+E+ H A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL A+N V +K+ WA + + ++ +FVGDLSPEI+ +L F+ F
Sbjct: 213 NALQALNGTVLANYPLKITWAYRT---QQSRSGENFTLFVGDLSPEIDDDSLAATFSKFP 269
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D +T +S+GY FVSF +AE + MNG LG RSIR NW+ R+
Sbjct: 270 SFVQANVMWDMKTGRSRGYGFVSFQNNQDAETVLQTMNGMSLGGRSIRLNWAVRR 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
+++ V Q+ C VY G + + + FG IV+ ++ EKG AFV + + E
Sbjct: 395 SYEMVLRQTPSWLCAVYLGNLAHYTQQSDLIPLLQNFGYIVNFKLLPEKGCAFVTYDSHE 454
Query: 254 TATHAIESIHNTDINGHTVKCFWGKESE 281
A AI ++ ++NG +KC WGK ++
Sbjct: 455 RAALAIVQLNGFNVNGRPLKCGWGKANK 482
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 34/308 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAAT 61
E+ LY+GNLD S+ E+ L F G + KV+ + N+ YAF+E+ + A
Sbjct: 27 ETSDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDKKNNHVNYAFIEYSTNHDANV 86
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N K +K+NWA DTS +++F+GDL+ ++ TL AF
Sbjct: 87 ALQTLNGIQIENKNIKINWAFQSQTNLNDDTS--FNLFIGDLNVNVDDTTLANAFKSCPG 144
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
++ D QT +S+GY FVSF A+ A+ M G + R+IR NW+T++ N
Sbjct: 145 FLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEINGRAIRINWATKRENMNNN 204
Query: 182 E-------------RKR------QNSHTKTI-----------TFDEVYNQSSPTNCTVYC 211
R R QN +++ ++ P T Y
Sbjct: 205 SNNNTNNNNNNNQVRNRMMMEGQQNMPPPPPPMGSLPPVNPQAVEDMIRRAPPRVTTAYI 264
Query: 212 GGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
G E + + FG I+D + EKG F+K+ T E A I ++ N G
Sbjct: 265 GNIPHFATEPDLIPLLQNFGFILDFTHYPEKGCCFIKYDTHEQAAVCIVALSNFQFQGRN 324
Query: 272 VKCFWGKE 279
++ WGKE
Sbjct: 325 LRTGWGKE 332
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+++G+L I LK+ F G+I + +++ D + YAF+ + +A A+ +
Sbjct: 33 LYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDKKN-NHVNYAFIEYSTNHDANVALQTL 91
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG + +++I+ NW+ F N + T+ ++ G +
Sbjct: 92 NGIQIENKNIKINWA----------------------FQSQTNLNDDTSFNLFIGDLNVN 129
Query: 218 LNEELVSKVFSPF------GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++ ++ F + D++ + +GY FV F T E A A++ + +ING
Sbjct: 130 VDDTTLANAFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEINGRA 189
Query: 272 VKCFWGKESE 281
++ W + E
Sbjct: 190 IRINWATKRE 199
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 24/292 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+L++G+L + E L + F Q + KVIR ++ Y F+EF H A AL +
Sbjct: 18 SLWIGDLQYWMDESYLKSCFPQ-STIVSTKVIRNKITGHHEGYGFVEFESHAAAEKALQS 76
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V E+ ++NWA G+ K+D+ IFVGDL+ ++ L E F + + +
Sbjct: 77 FTGAVMPRTEQAFRLNWACVGGD--KRDSGADDSIFVGDLAADVTDAMLLETFKSRYPSV 134
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ ++V D + + +GY FV F + E +A+T M+G + SR +R +T K
Sbjct: 135 KSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATPK------- 187
Query: 183 RKRQNSHTKTITFDEV--YNQSSP------TNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
++ Q + +++ V Y +P TN T++ GG ++++ + + VFSP+G I
Sbjct: 188 KQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIK 247
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
++ +G FV+F T+ +A A++ +H + I TV+ WG+ N +
Sbjct: 248 YTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQVI 299
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D+ TT++VG LD +V+ + L +FS G +K K+ P F++F+ A A
Sbjct: 215 DDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKI---PPGRGCGFVQFMTRASAEEA 271
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQ 87
L ++ V ++ ++++W P N+
Sbjct: 272 LKQVHGSVIGQQTVRLSWGRHPANK 296
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+++E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A+E ++ DING + F G+
Sbjct: 228 GKSKGFGFVSFEKHEEANKAVEEMNGKDINGKML--FVGR 265
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KSKG+ FVSF K EA A+ MNG+ + + + + +K ++R
Sbjct: 221 KVMTDP-TGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRR 279
Query: 186 QNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
F+++ + S +Y +++E + K FSPFG+I +V E
Sbjct: 280 ---------FEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + G KV+ +P + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K + V A Q KQ+ + Y ++++ +L I+ + L
Sbjct: 251 MNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 311 RKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
RK +TN+ ++ + + + + + NQ P
Sbjct: 369 QRKEERKAHLTNQYMQRIAGMRALPANTIINQFQP 403
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAATALAAMN 67
LYVG LD +++E+ L +FSQ G + K++ + N YAF+EF + A+ A +N
Sbjct: 104 LYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASNAFQELN 163
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRI 127
+ + +NWA Q +++S H++IFVGDLS EI+ + LK AF + + +
Sbjct: 164 NKTLQNSVISINWAYQS--QQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQAHV 221
Query: 128 VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ D Q+ +S+GY FVSF + +AE A+T G +G+R +R NW++ K
Sbjct: 222 MWDMQSGRSRGYGFVSFTNQQDAELALTTKQGSQIGNRQVRLNWASHK 269
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L I L+E F+ GEI N +I+ D ++ YAF+ F + A NA +
Sbjct: 104 LYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNK-QNFNYAFIEFQNELNASNAFQEL 162
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + L + I NW+ + A ++S + ++ G +
Sbjct: 163 NNKTLQNSVISINWAYQSQQA----------------------KNSSEHFNIFVGDLSTE 200
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F+ + ++V D++ + +GY FV FT ++ A A+ + + I
Sbjct: 201 IDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSFTNQQDAELALTTKQGSQIGNRQ 260
Query: 272 VKCFW 276
V+ W
Sbjct: 261 VRLNW 265
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKE 253
++D V ++ TVY G + + + FG IVD++ +EK AF+K+ + E
Sbjct: 378 SYDLVLRKTPSWLTTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQEKNCAFIKYDSHE 437
Query: 254 TATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ 296
A AI + ING +K WGK+ N++ Q P Q
Sbjct: 438 RAALAIVQLSGLIINGRPLKTGWGKDRINHNVQYQNYGPVIYQ 480
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK-----GYAFVKFTTKETATHAI 259
+N +Y GG K ++E+ + ++FS G I ++++ +K YAF++F + A++A
Sbjct: 100 SNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASNAF 159
Query: 260 ESIHNTDINGHTVKCFWGKESE 281
+ ++N + + W +S+
Sbjct: 160 QELNNKTLQNSVISINWAYQSQ 181
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 22/295 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE-----PGNDPYAFLEFVHHTVAATAL 63
TL++G++ ++ E + +LF+ K+IR+ P Y FLEF A L
Sbjct: 7 TLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIRDKVTGYPAG--YGFLEFPSQQGAQAVL 64
Query: 64 AAMNKRVFLE--KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FG 120
N ++ ++NW + + DT + IFVGDL+PE+ + L F+ F
Sbjct: 65 NTFNGQIVPNTIHRFRLNWGAG---GRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFS 121
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V DP T KG+ FV F K EA+ A+ MNG + SR +R + +T + T
Sbjct: 122 SVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDR----T 177
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
R + N TV+ GG E+ + F G I+ ++V
Sbjct: 178 KTRGIMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPP 237
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTP 295
+G FV++ TK+ A AI ++ ING V+C WG+ S A+ + TTP
Sbjct: 238 GRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGR-----SAAARLAGSTTP 287
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFS-QIGPVKGCKVIREPGN---DPYAFLEFVHHTV 58
D + +++VG+L V++ELL + FS + V+G KV+ +P + F+ F
Sbjct: 91 DTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGE 150
Query: 59 AATALAAMNKRVFLEKEMKVNWASSP----------------GNQPKQDTSNHYHIFVGD 102
A AL MN + M+V+ A+ G ++ + +F+G
Sbjct: 151 ADQALQTMNGVYCSSRPMRVSVATDRTKTRGIMPPPISYTVVGTGNTEEEGANTTVFIGG 210
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L P L+ F GEI + ++ +G FV +V K A+ AI MNG +
Sbjct: 211 LDPSTTEDDLRARFGVIGEIMSVKVP------PGRGCGFVQYVTKDAADVAINQMNGALI 264
Query: 163 GSRSIRTNW 171
+R W
Sbjct: 265 NGVKVRCAW 273
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
+E TT+++G LD S TE+ L A F IG + KV P F+++V A A
Sbjct: 199 EEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKV---PPGRGCGFVQYVTKDAADVA 255
Query: 63 LAAMNKRVFLEKEMKVNWASS 83
+ MN + +++ W S
Sbjct: 256 INQMNGALINGVKVRCAWGRS 276
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 37/281 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + FS G + KVIR + Y F+EFV H VA L
Sbjct: 92 TIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKVLQE 151
Query: 66 MNKRVFL--EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+N L E+ ++NWAS + + + IFVGDL+PE+ L++ F+ + +
Sbjct: 152 LNGEAMLNAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQIFSEKYPSV 211
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
N ++V D T +SKGY FV F +E A+ MNG R++R +T RKP
Sbjct: 212 KNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATPRKPSG--- 268
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
Y+Q G + ++ + + F+ +G IV +++
Sbjct: 269 -----------------YHQQ----------GLDSSVTDDDLRQPFAGYGEIVSVKIPVG 301
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG F++F +E A A+E ++ + I TV+ WG+ N
Sbjct: 302 KGCGFIQFVNRENAEEALEKLNGSMIGKQTVRLSWGRNPGN 342
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 149/295 (50%), Gaps = 37/295 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATA 62
+ +LYVG+L VTE++L F+ +GPV ++ R+ + YA++ F++ A
Sbjct: 8 RHASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKV 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN + K +++ W+ K N +F+ +L I+ + L E F+ FG+I
Sbjct: 68 LDTMNFDMIQGKSIRLMWSQRDAYLRKSGIGN---VFIKNLDRSIDNKMLYEHFSAFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D + S+GYAFV F ++ A+ AI MNG L N P N
Sbjct: 125 LSSKVMSDDKG--SRGYAFVHFQSQSAADRAIEEMNGALL------KNCRLFVGP-FKNR 175
Query: 183 RKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-- 239
++R+ E+ N+++ TN VY FG D+++E + +VFS +G IV ++V
Sbjct: 176 KEREA---------ELQNKANEFTN--VYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTD 224
Query: 240 ---KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F T E A A+E ++ DI G V F G K++E + L Q
Sbjct: 225 SSGKSKGFGFVSFDTHEAAQRAVEYMNGKDICGQMV--FVGRAQKKAERQAELKQ 277
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ ++L FS G + KV+ + G+ YAF+ F + A A+ MN
Sbjct: 99 NVFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSDDKGSRGYAFVHFQSQSAADRAIEEMN 158
Query: 68 KRVFLEKEMKVN-WASSPGNQPK-QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ + V + + + + Q+ +N + ++++ + +++ + LKE F+ +G+I +
Sbjct: 159 GALLKNCRLFVGPFKNRKEREAELQNKANEFTNVYIKNFGDDMDDERLKEVFSQYGKIVS 218
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D KSKG+ FVSF A+ A+ MNG+ + + + + +K E K
Sbjct: 219 VKVMTDSSG-KSKGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQA-ELK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ K F +Y + ++EE + + FS FG++ ++V +E
Sbjct: 277 QMFEQLKRERF------GRCRGVKLYIKNLDETIDEEQLRRAFSSFGSMSRVKVMEEEGR 330
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F+ E AT A+ ++NG +
Sbjct: 331 SKGFGLICFSCPEEATKAM-----AEMNGQVL 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FSQ G + KV+ + + F+ F H A A+
Sbjct: 190 TNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAAQRAVEY 249
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
MN + VF+ E++ ++ + + +++ +L I+ + L
Sbjct: 250 MNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDETIDEEQL 309
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+ AF+ FG +S +++ + +SKG+ + F EA A+ MNGQ LGS++I +
Sbjct: 310 RRAFSSFGSMSRVKVMEEEG--RSKGFGLICFSCPEEATKAMAEMNGQVLGSKAINIALA 367
Query: 173 TR 174
R
Sbjct: 368 QR 369
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPLRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + + T VY FG+D+++E + ++FS +G + IRV
Sbjct: 181 AELGARAREFT-------------NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDG 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG V
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQV 261
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D KSKG+ FVSF + +A+ A+ MNG+ L R + + +K NE KR
Sbjct: 221 RVMTD-DGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK-GERQNELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y L++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ GP +V+ + G + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDD 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + +++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G ++ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRD 90
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPLRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + + T VY FG+D+++E + ++FS +G + IRV
Sbjct: 181 AELGARAREFT-------------NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG V
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQV 261
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L R + + +K NE KR
Sbjct: 221 RVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKK-GERQNELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y L++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ GP +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + +++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G ++ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRD 90
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+N+E + ++F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A++ ++ D+NG ++ F G+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSM--FVGR 265
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + ++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D KSKG+ FVSF + +A+ A+ M G+ + +S+ + +K T +RK
Sbjct: 221 KVMTDDNG-KSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ + IT + N +Y +++E + K F PFGTI +V E
Sbjct: 280 FEQMNQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 M---------------NKRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
M K+V + E+K + Q QD Y +++V +L I
Sbjct: 251 MYGKDMNGKSMFVGRAQKKVERQTELKRKF-----EQMNQDRITRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRD 90
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 31/288 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+LYVG+L V E +L FS GPV +V R+ YA++ F A A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN K M++ W+ P S +IF+ +L I+ +++ + F+ FG I +C
Sbjct: 93 MNFEALHGKPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D SKGY FV F + A+NAI +NG L + + +P A N
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV--GKFQPRAQRNRE-- 204
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----KE 241
+++ VY FG N+E + KVF+ FG I V K
Sbjct: 205 -------------LGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKS 251
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVK---CFWGKESENNSTL 286
KG+ FV F E A A++++H++ I G +K C K+SE ++ L
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G + + R+ RD T S GYA+V+F + A+AE A+ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + L + +R WS R P +S N ++ K
Sbjct: 94 NFEALHGKPMRIMWSQRDP---------------------AMRRSGAGN--IFIKNLDKV 130
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + + FS FG I+ +V + KGY FV F T+E A +AI+ ++ + G
Sbjct: 131 IDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK-- 188
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY 316
K F GK QP A + TA QF +Y + G Y
Sbjct: 189 KVFVGK--------FQPRAQRNRELGETAKQFTNVYVKNFGDHY 224
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q T +YV N +E L +F++ G + C+V+ G + F+ F + A TA+
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQ 270
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------------IFVGDLSPEIET 109
A++ ++K++ + + H ++V +L ++
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 330
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
LK+ F +G I++ +++ D + +SKG+ FV F K EA +A+T MN + + S+ +
Sbjct: 331 DGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV 389
Query: 170 NWSTRK 175
RK
Sbjct: 390 AIGQRK 395
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 15/270 (5%)
Query: 19 VTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF--LE 73
+ E L F G V KVIR ++ Y F+EF H A L + + +
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTD 60
Query: 74 KEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEISNCRIVRDPQ 132
+ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + + ++V D
Sbjct: 61 QPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDAN 120
Query: 133 TLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKT 192
T +SKGY FV F +E +A+T MNG + SR +R +T + + T+ ++
Sbjct: 121 TGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARP-- 178
Query: 193 ITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTK 252
+ TN TV+ GG D++EE + + FS +G I +++ K FV+F +
Sbjct: 179 -------DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQR 231
Query: 253 ETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ A A++ ++ + I V+ WG+ N
Sbjct: 232 KNAEDALQGLNGSTIGKQAVRLSWGRNPAN 261
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD V+EE L FSQ G + K+ P F++F A AL +N
Sbjct: 186 TTVFVGGLDPDVSEEDLRQAFSQYGEISSVKI---PVGKQCGFVQFAQRKNAEDALQGLN 242
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSN 94
++ ++++W +P N Q + D N
Sbjct: 243 GSTIGKQAVRLSWGRNPANKQFRGDNGN 270
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N IF+ ++ I+ + L + F+ FG I +C
Sbjct: 72 MNYDVIKGRPIRIMWSQRDPGLRKSGVGN---IFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D + SKGY FV F + A AI MNG L R + ++ +RK +
Sbjct: 129 KVVCDERG--SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRK-------ER 179
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ +K + F TN +Y FG+D N+E + +VF+ FG + +RV K+
Sbjct: 180 EEELGSKALKF---------TN--IYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERG 228
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F E A A++ ++ ++NG +
Sbjct: 229 RSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVI 261
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ N+D S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETEEAANRAIETMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + ++ S +I++ + + + LKE FA FG +
Sbjct: 161 MLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R+++D + +S+G+ FV+F +A+ A+ MNG+ L + I + ++ +R
Sbjct: 221 RVMKDERG-RSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKR-------LER 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q + + +Y +++E + K F+P+GTI +V +
Sbjct: 273 QGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGPQS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F++ E AT A+ T++NG V
Sbjct: 333 RGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAA 65
T +Y+ N +E L +F+ G +V++ E G + F+ F HH A A+
Sbjct: 191 TNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGNQP----------KQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K + V A + KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRD-PQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
++ FAP+G I++ +++ D PQ S+G+ FV F EA A+T MNG+ + ++ +
Sbjct: 311 RKEFAPYGTITSAKVMTDGPQ---SRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 172 STR---KPPAMTNERKRQNSHTKTIT 194
+ R + +TN+ ++ + +T+T
Sbjct: 368 AQRREERKAILTNKYMQRLATLRTMT 393
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNYDVIKGRPIRIMWSQRD 90
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+N+E + ++F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A++ ++ D+NG ++ F G+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSM--FVGR 265
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + ++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D KSKG+ FVSF + +A+ A+ MNG+ + +S+ + +K T +RK
Sbjct: 221 KVMTDDNG-KSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K F PFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K M V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFLPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRD 90
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 58/331 (17%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++ E+ L F GP+ KV+ + N+ YAF+E+ A
Sbjct: 59 ETSDRILYVGNLDKAINEDTLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYHQPHDANV 118
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A ++ + +K+NWA + DT +++FVGDL+ +++ +TL F F
Sbjct: 119 AFQTLDGKQIEGNVIKINWAFQSQHVSSDDT---FNLFVGDLNVDVDDETLTGTFKEFPS 175
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
++ D + +S+GY FVSF ++ A+ A+ + G L R+IR NW++++ P
Sbjct: 176 FIQAHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASKREPQQHQ 235
Query: 182 ERKRQN----------SHTKTITFDEVYNQSSPTNC------------------------ 207
R R N SH + + + SP N
Sbjct: 236 PRPRSNRGGFRNNNGPSHQQFRGIPQGHPMGSPNNAGPMGMAPQGMAPQGIPPQGPVVPP 295
Query: 208 -------------------TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVK 248
T Y G E + + FG I+D + + EKG F+K
Sbjct: 296 PVNPQAVEAMIRRAPQRVTTAYIGNIPHFAQEPDLIPLLQNFGFIIDFKHYPEKGCCFIK 355
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ T E A I ++ N G ++ WGKE
Sbjct: 356 YDTHEQAAVCIVALANFPFQGRNLRTGWGKE 386
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I TLK+ F G I+N +++ D + + YAFV + + +A A +
Sbjct: 65 LYVGNLDKAINEDTLKQYFQVGGPIANVKVLVD-KNNEEANYAFVEYHQPHDANVAFQTL 123
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
+G+ + I+ NW+ + ++ ++ D+ +N ++ G D
Sbjct: 124 DGKQIEGNVIKINWAFQ---------------SQHVSSDDTFN--------LFVGDLNVD 160
Query: 218 LNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E ++ F F + + V + +GY FV F+ ++ A A+ES +NG
Sbjct: 161 VDDETLTGTFKEFPSFIQAHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRA 220
Query: 272 VKCFWGKESE 281
++ W + E
Sbjct: 221 IRINWASKRE 230
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D+N+E + ++F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A++ ++ D+NG ++ F G+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSM--FVGR 265
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + ++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D KSKG+ FVSF + +A+ A+ MNG+ + +S+ + +K T +RK
Sbjct: 221 KVMTDDNG-KSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K F PFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K M V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFLPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRD 90
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG ++ +E + ++F +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV F E A A+E I+ T++NG TV F G+
Sbjct: 228 GKSRGFGFVSFEKHEDANKAVEEINGTELNGKTV--FVGR 265
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E+E + LKE F +G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KS+G+ FVSF K +A A+ +NG L +++ + +K +R
Sbjct: 221 KVMTD-SSGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKK-------MER 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q + + S +Y +++E + K FSPFG+I +V E
Sbjct: 273 QAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + G KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFVSFEKHEDANKAVEE 250
Query: 66 MN------KRVF-------LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
+N K VF +E++ ++ Q + ++++ +L I+ + L
Sbjct: 251 INGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 311 RKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTN 206
RK +TN+ ++ + + + + + NQ PT+
Sbjct: 369 QRKEERKAHLTNQYMQRIAGMRAMPPNAIINQFQPTS 405
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 32/280 (11%)
Query: 4 ESQP---TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHT 57
ES P +LYVG LD SVTE +L +F+ IGPV +V R+ YA++ F
Sbjct: 21 ESAPLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMA 80
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A AL +N + + ++ W+ P N+ +IF+ +L P I+ + L + F+
Sbjct: 81 DAERALETLNYSMIKGRSCRIMWSQ---RDPSLRKGNNGNIFIKNLDPSIDHKALHDTFS 137
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG I +C+I D Q SKGY FV + AE+AI ++NG L R + +
Sbjct: 138 AFGNILSCKIAHDEQG-NSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISR-- 194
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
ER+ + ++ + F +Y ++ P D+ +E +S++F +GTI
Sbjct: 195 ---KERESKLGESR-VQFTNIYVKNIPF-----------DVTDEELSQLFGKYGTITSCV 239
Query: 238 VFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ ++ KG+ FV F + A +A++ +H D G +
Sbjct: 240 ITRDDDGTSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDL 279
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 52/250 (20%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L P + L E F G +S+ R+ RD T +S GYA+V+F + A+AE A+ +
Sbjct: 30 LYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERALETL 89
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + RS R WS R P RK N + ++
Sbjct: 90 NYSMIKGRSCRIMWSQRDPSL----RKGNNGN-------------------IFIKNLDPS 126
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + + FS FG I+ ++ + KGY FV + T E A AI+S++ +N
Sbjct: 127 IDHKALHDTFSAFGNILSCKIAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDR-- 184
Query: 273 KCFWG---KESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWYPQAAAYTATAAQL 329
K F G E S L + QF IY + + + T +L
Sbjct: 185 KVFVGHHISRKERESKLGESRV-----------QFTNIYVKNI--------PFDVTDEEL 225
Query: 330 PQQFYQYGQL 339
Q F +YG +
Sbjct: 226 SQLFGKYGTI 235
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CK+ E GN Y F+ + A +A+ ++N
Sbjct: 118 IFIKNLDPSIDHKALHDTFSAFGNILSCKIAHDEQGNSKGYGFVHYETLEAAESAIKSVN 177
Query: 68 ------KRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++VF+ + S + + +N I+V ++ ++ + L + F +G
Sbjct: 178 GMLLNDRKVFVGHHISRKERESKLGESRVQFTN---IYVKNIPFDVTDEELSQLFGKYGT 234
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
I++C I RD SKG+ FV+F K +A+NA+ ++ + + + + + +K N
Sbjct: 235 ITSCVITRDDDG-TSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKK-----N 288
Query: 182 ER----KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
ER +RQ K + S +Y D++++ + FS +G I +
Sbjct: 289 EREEELRRQYEEAK------LEKMSKYQGVNLYVKNLDDDMDDDRLRDEFSVYGVITSAK 342
Query: 238 VFKE------KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ ++ +G+ FV FT+ E AT A+ T++NG +
Sbjct: 343 IMRDEKTNISRGFGFVCFTSPEDATRAV-----TEMNGRII 378
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 17/186 (9%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATAL 63
Q T +YV N+ VT+E L LF + G + C + R+ + + F+ F H A A+
Sbjct: 207 QFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAV 266
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIET 109
++K+ F +++ V+ A N+ +++ Y +++V +L +++
Sbjct: 267 DDLHKKDFRGQDLYVSRAQKK-NEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDD 325
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
L++ F+ +G I++ +I+RD +T S+G+ FV F +A A+T MNG+ +GS+ I
Sbjct: 326 DRLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYV 385
Query: 170 NWSTRK 175
+ RK
Sbjct: 386 AIAQRK 391
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ P + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPLRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
+ +C++V D SKGY FV F + AE AI MNG L R + + +RK
Sbjct: 124 NVLSCKVVCDENG--SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
ER+ + + K VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELGARAKEFP-------------NVYIKNFGEDMDDERLKDLFGKFGPTLSVKV 222
Query: 239 F-----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 223 MTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 132/280 (47%), Gaps = 39/280 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G V CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREAAERAIEKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 IPLNDRKVFVGRFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D Q+ KSKG+ FVSF K +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPTLSVKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNER-KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
T + K + IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQTELKCKFEQMKQDRITRYQVVN--------LYVKNLDDAIDDERLRKAFSPFGTITSA 323
Query: 237 RVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 324 KVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG ++ +V + KGY FV F T+E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREAAERAIEKMNGIPLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 13 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 72
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 73 MNFDVVKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 129
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 130 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK------ERE 181
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG D++++ + ++F +G + ++V
Sbjct: 182 AEMGAKAKEFT-------------NVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPT 228
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV + E A A+E ++ T++NG TV F G+
Sbjct: 229 GKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTV--FVGR 266
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 102 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 161
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ Q LKE F +G+ +
Sbjct: 162 MLLNDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSV 221
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ DP T KS+G+ FVS+ K +A A+ MNG L +++ + +K E KR
Sbjct: 222 KVMTDP-TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQA-ELKR 279
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 280 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRS 333
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 334 KGFGFVCFSSPEEATKAV-----TEMNGRIV 359
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L LF + G KV+ +P + F+ + H A A+
Sbjct: 192 TNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYEKHEDANKAVEE 251
Query: 66 MN------KRVFLEK---------EMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K VF+ + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 252 MNGTELNGKTVFVGRAQKKMERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 306
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 307 DDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 364
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 365 YVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQP 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 293 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 352
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 353 EMNGRIVGSKPLYVALA 369
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F +G + IRV
Sbjct: 181 AEMGARAKEFT-------------NVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG V
Sbjct: 228 GKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQV 261
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KSKG+ FVSF + +A+ A+ MNG+ + + + + +K T E KR
Sbjct: 221 RVMTD-DSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y L++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 251 MNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRD 90
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 7/284 (2%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E+ L F+ V KVIR ++ Y F+EF H A L
Sbjct: 118 TIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQT 177
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ +++ ++NWA+ + + + IFVGDL+ ++ L E FA + +
Sbjct: 178 YSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPSV 237
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F E A+T MNG + SR +R +T RK
Sbjct: 238 KAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQ 297
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ Q ++ + TN T++ GG ++++E + + F +G IV +++ E
Sbjct: 298 QYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIPVE 357
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
+ +F + A A++ ++ T I TV+ FWG+ N +
Sbjct: 358 ERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQS 401
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ D+NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAI 261
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D KSKG+ FVSF + +A+ A+ MNG+ + ++I + +K T +RK
Sbjct: 221 KVMTD-DNGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDD 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQD Y +++V +L I
Sbjct: 251 MNGKDMNGKAIYVGRAQKKVERQTELKRKF-----EQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 131/288 (45%), Gaps = 31/288 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+LYVG+L V E +L FS GPV +V R+ YA++ F A A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN K M++ W+ P S +IF+ +L I+ +++ + F+ FG I +C
Sbjct: 93 MNFEALHGKPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D SKGY FV F + A+NAI +NG L + + +P A N
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV--GKFQPRAQRNRE-- 204
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----KE 241
+++ VY FG N+E + K+F+ FG I V K
Sbjct: 205 -------------LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKS 251
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVK---CFWGKESENNSTL 286
KG+ FV F E A A++++H++ I G +K C K+SE ++ L
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G + + R+ RD T S GYA+V+F + A+AE A+ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + L + +R WS R P +S N ++ K
Sbjct: 94 NFEALHGKPMRIMWSQRDP---------------------AMRRSGAGN--IFIKNLDKV 130
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + + FS FG I+ +V + KGY FV F T+E A +AI+ ++ + G
Sbjct: 131 IDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK-- 188
Query: 273 KCFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMGYWY 316
K F GK QP A + TA QF +Y + G Y
Sbjct: 189 KVFVGK--------FQPRAQRNRELGETAKQFTNVYVKNFGDHY 224
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q T +YV N +E L LF++ G + C+V+ G + F+ F + A TA+
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQ 270
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH---------------IFVGDLSPEIET 109
A++ ++K++ + + H ++V +L ++
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 330
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
LK+ F +G I++ +++ D + +SKG+ FV F K EA +A+T MN + + S+ +
Sbjct: 331 DGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV 389
Query: 170 NWSTRK 175
+ RK
Sbjct: 390 AIAQRK 395
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +ING + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII--FVGR 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEINGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 30/287 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + +IF+ +L +I+ + L + FA FG + +C
Sbjct: 108 LNYSLIKNRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSC 164
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D SKGY FV + AENAI ++NG L + + + ++R
Sbjct: 165 KVATDEHG-NSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFVGHHIPR-------KER 216
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q+ DE+ Q + +Y +L +E ++F FG I + K+
Sbjct: 217 QSK------IDEMKAQYT----NIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGK 266
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG-KESENNSTL 286
+G+ FV F + E A A+E++H+T+ING + K+SE L
Sbjct: 267 SRGFGFVNFESHEQAAAAVETLHDTEINGRKLYVARAQKKSEREDEL 313
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 18/269 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD + + L F+ G V CKV E GN Y F+ + A A+ ++
Sbjct: 136 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSV 195
Query: 67 NKRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + Q K D + + +I+V +L PE+ + +E F FG I+
Sbjct: 196 NGMLLNDKKVFVGHHIPRKERQSKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNIT 255
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D + KS+G+ FV+F +A A+ ++ + R + + +K
Sbjct: 256 SAALSKDEEG-KSRGFGFVNFESHEQAAAAVETLHDTEINGRKLYVARAQKK-------S 307
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+R++ K+ + S +Y D+++E + F PFGTI +V ++
Sbjct: 308 EREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEK 367
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDI 267
KG+ FV F++ + AT A+ ++N I
Sbjct: 368 NTSKGFGFVCFSSPDEATKAVSEMNNKMI 396
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAAT 61
++Q T +YV NLD + +E LF + G + + + E + + F+ F H AA
Sbjct: 224 KAQYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHEQAAA 283
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ ++ +++++ E+E ++ + Q K ++++ +L +I+
Sbjct: 284 AVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDID 343
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
+ L+ F PFG I++C+++RD + SKG+ FV F EA A++ MN + +GS+ +
Sbjct: 344 DEKLRAEFEPFGTITSCKVMRDEKNT-SKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLY 402
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ T+ +++ Q +
Sbjct: 403 VSLAQRR------EVRRQQLETQIAQRNQIRMQQA 431
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +ING + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEINGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +ING + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII--FVGR 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEINGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ + K+ N IFV +L I + L + + FG
Sbjct: 67 HALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGN---IFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T E KR
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
K IT +V N +Y +++E + K FSPFGTI +V E
Sbjct: 279 TFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALHTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P + RKR + ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDP----SLRKRGVGN-------------------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +N+E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGINDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGINDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ + K+ N IFV +L I + L + + FG
Sbjct: 67 HALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGN---IFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T E KR
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
K IT +V N +Y +++E + K FSPFGTI +V E
Sbjct: 279 TFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALHTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P + RKR + ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDP----SLRKRGVGN-------------------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIKKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +ING + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII--FVGR 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEINGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 25/307 (8%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAAT 61
Q TTL++G L+ + E + +++ +G K+IR+ N Y F++F + AA
Sbjct: 78 DQKTTLWMGELEPWIDENFIRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDSAAR 137
Query: 62 ALAAMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA- 117
ALA + + ++ K+NWAS G ++ + D Y IFVGDL PE+ L F
Sbjct: 138 ALALNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQN 197
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
+ + +I+ DP + S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 198 KYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTATPKNK 257
Query: 178 AMTNERKRQNSHTKTITFDEVYNQ-----------------SSPTNCTVYCGGFGKDLNE 220
+ + +Y+ + P N TV+ GG + E
Sbjct: 258 SGGAGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 317
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 318 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-S 376
Query: 281 ENNSTLA 287
+NNS A
Sbjct: 377 QNNSGPA 383
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEG 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D + KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + G + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + R+ ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRR------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + + FS +G + ++V
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K KG+ FV F E A A++ ++ D+NG + F G+
Sbjct: 228 GKSKGFGFVSFERHEDANKAVDDMNGKDVNGKIM--FVGR 265
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 33/277 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNG 160
Query: 68 -----KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++VF+ + + + + G + K+ T ++++ + +++ + LKE F+ +G+
Sbjct: 161 MLLNDRKVFVGRFKCRREREAELGAKAKEFT----NVYIKNFGEDMDDERLKETFSKYGK 216
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +++ DP KSKG+ FVSF + +A A+ MNG+ + + + + +K
Sbjct: 217 TLSVKVMTDPSG-KSKGFGFVSFERHEDANKAVDDMNGKDVNGKIMFVGRAQKKVERQAE 275
Query: 182 ERKRQNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
++R F+++ + S +Y +++E + K FSPFG+I +V
Sbjct: 276 LKRR---------FEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM 326
Query: 240 KE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ FV F++ E AT A+ T++NG V
Sbjct: 327 LEEGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 32/193 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G + + R+ RD T +S GYA+V+F + A+AE A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + IR WS R P ++ V N V+ K
Sbjct: 73 NFDVIKGKPIRIMWSQRDP---------------SLRKSGVGN--------VFIKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV- 272
++ + + FS FG I+ +V + KGYAFV F T++ A AIE ++ +N V
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 273 ----KCFWGKESE 281
KC +E+E
Sbjct: 170 VGRFKCRREREAE 182
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L FS+ G KV+ +P + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDD 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKDVNGKIMFVGRAQKKVERQAELKRRF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRIAGMRALPANTLINQFQP 403
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFDVIKGKPIRIMWSQRD 90
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +ING + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVI--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEINGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETA 255
SS ++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A
Sbjct: 6 SSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 256 THAIESIHNTDINGHTVKCFW 276
A+++++ I G ++ W
Sbjct: 66 ERALDTMNFDVIKGKPIRIMW 86
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
MN R+ K + V A + K +N Y
Sbjct: 352 EMNGRIVGSKPLYVALAQRK-EERKAHLTNQY 382
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NASAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + ++ T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KRV + E+K + Q KQD Y +++V +L I
Sbjct: 251 MNGKELNGKQIYVGRAQKRVERQTELKRKF-----EQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 29/326 (8%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHT 57
M E TL++G+L + E + ++F G + K+IR ++ Y F+EF H
Sbjct: 4 MTAEQGTKTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHE 63
Query: 58 VAATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A L N ++ ++NWA+ K T + Y +FVGDL+P++ L+E
Sbjct: 64 AAEQVLRTFNGCPIPNTDQIFRLNWAAF--GVGKVTTDSDYSVFVGDLAPDVTDYALQEH 121
Query: 116 FAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
F F + + +++ DP T +SKGY FV F +AE + ++T M+G + SR IR + +T
Sbjct: 122 FRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATA 181
Query: 175 KPP-------------AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEE 221
K N R R + + P N T++ GG ++E+
Sbjct: 182 KKSQTATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSED 241
Query: 222 LVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIE--------SIHNTDINGHTVK 273
+ +F FG IV ++ KG FV+F + A A+ S+ + G T++
Sbjct: 242 DLRVLFGRFGDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIR 301
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNS 299
WG+ S + + + +A P P +
Sbjct: 302 ISWGRSSTSRAAVNAAAAAAAPYPGT 327
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 161/361 (44%), Gaps = 66/361 (18%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATA 62
E+ LYVGNLD S+ E++L F GP+ KVI + N+ YAF+E+ H A+ A
Sbjct: 73 ETSDKILYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNNEANYAFVEYSQHHDASIA 132
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH--YHIFVGDLSPEIETQTLKEAFAPFG 120
L +N + +K+NWA Q +Q+T++ +++F+GDL+ +++ +TL AF F
Sbjct: 133 LKTLNGKQIENNTLKINWAF----QSQQNTTSDETFNLFIGDLNVDVDDETLVAAFKDFK 188
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAI-----TAMNGQ-----WLGSRSIRTN 170
++ D QT +S+GY FVSF +A+ A+ + +NG+ W R ++
Sbjct: 189 SFIQAHVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASKRENNSS 248
Query: 171 WSTRKPPAMTNERKRQNSHTKTI------------------------------------- 193
++ + N+R+ N+ +
Sbjct: 249 NNSNRNGGGFNQRRHNNNGPRGNNNGGFRPFNNNMPPPPMGNMAPMGAPPTGPAVLPPVD 308
Query: 194 --TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTT 251
D++ ++ TVY G E + + FG I+D + + EKG F+K+ T
Sbjct: 309 PQAVDDMIRRAPQRVTTVYIGNIPHFATEADLIPLLQNFGFILDFKHYPEKGNCFIKYDT 368
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQ-PNSTAPQFPYIYNQ 310
E A I + N G +K WGKE ST P PQ PN P P++ N+
Sbjct: 369 HEQAAVCIVVLANFPFQGRNLKTGWGKEK---STF----MPMPPQDPNGQMP--PHMMNE 419
Query: 311 Q 311
Q
Sbjct: 420 Q 420
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRVV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN RV K + V A
Sbjct: 352 EMNGRVVATKPLYVALA 368
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|367000405|ref|XP_003684938.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
gi|357523235|emb|CCE62504.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
Length = 442
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND-PYAFLEFVHHTVAATA 62
E+ LYVGNLD S+ EE L F GP+ KVI + N YAF+E++ H A A
Sbjct: 75 ETSDKILYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNNSVNYAFVEYLQHHDADVA 134
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH--YHIFVGDLSPEIETQTLKEAFAPFG 120
+N + K +K+NWA Q +Q TS+ +++FVGDL+ +++ +TL AF+ F
Sbjct: 135 FKNLNGKTIETKVLKINWAF----QSQQTTSDESLFNLFVGDLNVDVDDETLGHAFSEFP 190
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA 178
++ D QT +S+GY F+SF + +A+ A+ M L R IR NW++++ A
Sbjct: 191 SFVQAHVMWDMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQIRINWASKRENA 248
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 97/191 (50%), Gaps = 30/191 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I +TLK+ F G ISN +++ D S YAFV +++ +A+ A +
Sbjct: 81 LYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNN--SVNYAFVEYLQHHDADVAFKNL 138
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + ++ ++ NW+ + +T + + ++N ++ G D
Sbjct: 139 NGKTIETKVLKINWAFQS--------------QQTTSDESLFN--------LFVGDLNVD 176
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + FS F + V D++ + +GY F+ F+ +E A A++ + +T++NG
Sbjct: 177 VDDETLGHAFSEFPSFVQAHVMWDMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQ 236
Query: 272 VKCFWGKESEN 282
++ W + EN
Sbjct: 237 IRINWASKREN 247
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D++ ++ TVY G E + + FG I+D + + EKG F+K+ T E A
Sbjct: 314 DDMIRRAPLRVTTVYIGNIPHFATEADLIPLLQNFGFILDFKYYPEKGNCFIKYDTHEQA 373
Query: 256 THAIESIHNTDINGHTVKCFWGKE 279
I + N G +K WGKE
Sbjct: 374 AVCIVVLANYPFQGRNLKTGWGKE 397
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG----YAFVKFTTKETATHAIE 260
++ +Y G K +NEE + + F G I +++V +K YAFV++ A A +
Sbjct: 77 SDKILYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNNSVNYAFVEYLQHHDADVAFK 136
Query: 261 SIHNTDINGHTVKCFWGKESENNST 285
+++ I +K W +S+ ++
Sbjct: 137 NLNGKTIETKVLKINWAFQSQQTTS 161
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPLRIMWSQ---RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y D+++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLQKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P +S N ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDPS---------------------LRKSGMGN--IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AIE ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPLRIMWSQ---RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y D+++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLQKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P +S N ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDPS---------------------LRKSGMGN--IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AIE ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPLRIMWSQ---RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y D+++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P +S N ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDPS---------------------LRKSGMGN--IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AIE ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 17/276 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR + + Y F+EF H A AL
Sbjct: 94 TIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQN 153
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ V E+ K+NWAS + + + + IFVGDL+ ++ + L E F+ + +
Sbjct: 154 FSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRSV 213
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+++ D T +S+GY FV F + A+T MNG + +R IR +T +
Sbjct: 214 KGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPR------- 266
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK 242
R + +S + +V TN TVY GG +++E+ + K F+ +G + +++ K
Sbjct: 267 RSQGDSGSSPPRQSDV----DSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGK 322
Query: 243 GYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
FV+F + A A++ ++ + I ++ WG+
Sbjct: 323 QCGFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGR 358
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S T+YVG LD +V+E+ L F++ G + K+ P F++FV+ A AL
Sbjct: 283 DSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKI---PFGKQCGFVQFVNRVDAEEAL 339
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
+N ++ ++++W SP ++ + H
Sbjct: 340 QGLNGSTIGKQAIRLSWGRSPTSKQSRGDYGH 371
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ + K N IFV +L I+++TL + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D SKGY FV F + EAE AI MNG +L + + R R
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGR-------FKSRRDR 179
Query: 186 Q---NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
Q + K T VY G+D+++E + +F FG + ++V
Sbjct: 180 QAELGARAKEFT-------------NVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A+E ++ D+NG +
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQI 261
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 68 -----KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+VF+ + + + + + G + K+ T+ +++ +L +++ + L++ F FG
Sbjct: 161 MFLNDHKVFVGRFKSRRDRQAELGARAKEFTN----VYIKNLGEDMDDERLQDLFGRFGP 216
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +++ D ++ KSKG+ FVSF + +A A+ MNG+ L + I + +K T
Sbjct: 217 ALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTE 275
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ + + E Q C +Y +++E + K FSPFGTI +V
Sbjct: 276 LKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 335
Query: 239 FKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ FV F++ E AT A+ T++NG V
Sbjct: 336 TMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGKIV 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ NL + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPK-----QDTS---NHYHIFVGD 102
MN K+V + E+K + ++ K QD S +++V +
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKN 310
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L I+ + L++ F+PFG I++ ++ + +SKG+ FV F EA A+T MNG+ +
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTMEGG--RSKGFGFVCFSSPEEATKAVTEMNGKIV 368
Query: 163 GSRSIRTNWSTRK 175
++ + + RK
Sbjct: 369 ATKPLYVALAQRK 381
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV++++ GYA V F E A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 45/317 (14%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++ E L F GP+ KV+ + N+ YAF+E+ A
Sbjct: 31 ETSDRILYVGNLDKTINEATLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYRQPRDANV 90
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
A ++ + +K+NWA DT +++FVGDL+ +++ +TL F F
Sbjct: 91 AFQTLDGKQIENNVIKINWAFQSQQVSSDDT---FNLFVGDLNVDVDDETLSSTFKEFPT 147
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
++ D Q+ +S+GY FVSF ++ EA+ A+ A G L R+IR NW+ ++ +
Sbjct: 148 FIQAHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAKR-ESQHA 206
Query: 182 ERKRQN---------------------------------------SHTKTITFDEVYNQS 202
R R N S + + ++
Sbjct: 207 ARPRSNRGGFRGGSGHQPFRGMPQGPHLGGAAPAGPMQLQGPPVPSPVNPQAVEAMIRRA 266
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESI 262
T Y G E + + FG I+D + + EKG F+K+ T + A I ++
Sbjct: 267 PQRVTTAYIGNIPHFAQEPDLIPLLQNFGFIIDFKHYAEKGCCFIKYDTHDQAALCIVAL 326
Query: 263 HNTDINGHTVKCFWGKE 279
N G T++ WGKE
Sbjct: 327 ANFPFQGRTLRTGWGKE 343
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 38/223 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I TLK+ F G I+N +++ D ++ YAFV + + +A A +
Sbjct: 37 LYVGNLDKTINEATLKQYFQVGGPIANVKVLVDKNNEEAN-YAFVEYRQPRDANVAFQTL 95
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
+G+ + + I+ NW+ + ++ ++ D+ +N ++ G D
Sbjct: 96 DGKQIENNVIKINWAFQ---------------SQQVSSDDTFN--------LFVGDLNVD 132
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E +S F F T + D++ + +GY FV F +E A A+++ ++NG
Sbjct: 133 VDDETLSSTFKEFPTFIQAHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRA 192
Query: 272 VKCFWGKESENNSTLAQPSA-------PTTPQPNSTAPQFPYI 307
++ W + E+ A+P + + QP PQ P++
Sbjct: 193 IRVNWAAKRESQHA-ARPRSNRGGFRGGSGHQPFRGMPQGPHL 234
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ + K N IFV +L I+++TL + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGN---IFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D SKGY FV F + EAE AI MNG +L + + R R
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGR-------FKSRRDR 179
Query: 186 Q---NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
Q + K T VY G+D+++E + +F FG + ++V
Sbjct: 180 QAELGARAKEFT-------------NVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A+E ++ D+NG +
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQI 261
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 68 -----KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
+VF+ + + + + + G + K+ T+ +++ +L +++ + L++ F FG
Sbjct: 161 MFLNDHKVFVGRFKSRRDRQAELGARAKEFTN----VYIKNLGEDMDDERLQDLFGRFGP 216
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +++ D ++ KSKG+ FVSF + +A A+ MNG+ L + I + +K T
Sbjct: 217 ALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTE 275
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNC---TVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
+ + + E Q C +Y +++E + K FSPFGTI +V
Sbjct: 276 LKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 335
Query: 239 FKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ FV F++ E AT A+ T++NG V
Sbjct: 336 TMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGKIV 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ NL + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPK-----QDTS---NHYHIFVGD 102
MN K+V + E+K + ++ K QD S +++V +
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKN 310
Query: 103 LSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL 162
L I+ + L++ F+PFG I++ ++ + +SKG+ FV F EA A+T MNG+ +
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTMEGG--RSKGFGFVCFSSPEEATKAVTEMNGKIV 368
Query: 163 GSRSIRTNWSTRK 175
++ + + RK
Sbjct: 369 ATKPLYVALAQRK 381
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV++++ GYA V F E A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 16/252 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + E L F+ G + KVIR + Y F+EF H A L
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 122
Query: 66 MNKR---VFLEKEMKVNWAS-SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
N F ++ ++NWAS S G+ K+D S Y IFVGDL+ ++ L E F A +
Sbjct: 123 FNNAPIPSFPDQLFRLNWASLSSGD--KRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ ++V D T ++KGY FV F ++E A+T MNG +R +R + K +T
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK-GVT 239
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+R S +T D + P N TV+ GG + ++ + VFS +G IV +++
Sbjct: 240 GQRDSYQSSAAGVTTD-----NDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA 294
Query: 241 EKGYAFVKFTTK 252
K FV+F+ K
Sbjct: 295 GKRCGFVQFSEK 306
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 38/187 (20%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+++GDL ++ L FA GE+ + +++R+ QT + +GY F+ F A AE +
Sbjct: 64 LWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTF 123
Query: 158 NGQWLGS---RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
N + S + R NW++ +++ KR +S + T++ G
Sbjct: 124 NNAPIPSFPDQLFRLNWAS-----LSSGDKRDDS----------------PDYTIFVGDL 162
Query: 215 GKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
D+ + ++ + F ++D + KGY FV+F+ + A+ T++
Sbjct: 163 AADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAM-----TEM 217
Query: 268 NGHTVKC 274
NG V C
Sbjct: 218 NG--VPC 222
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVI--REPGNDP-YAFLEFVHHTV 58
D+S T++VG+L VT+ +L F P VKG KV+ R G Y F+ F +
Sbjct: 150 DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESE 209
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTS--------------NHYHIFVGDLS 104
A+ MN + M++ A+S Q S N+ +FVG L
Sbjct: 210 QIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLD 269
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
+ LK F+ +GEI + +I K FV F +K
Sbjct: 270 ASVTDDHLKNVFSQYGEIVHVKIP------AGKRCGFVQFSEK 306
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
T++VG+L + E L + F G V KVIR + + Y F+EF H A AL
Sbjct: 100 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 159
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
V ++ K+NWAS + + + ++ + IFVGDL+ ++ L E FA + +
Sbjct: 160 FAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRSV 219
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
+++ D T +S+GY FV F + +A+T MNG + +R IR +T R+ +
Sbjct: 220 KGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDSG 279
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ S TN TVY GG +++E+ + K F+ +G + +++
Sbjct: 280 SSPPRQS------------DGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVG 327
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K FV+F + A A++++ + I V+ WG+
Sbjct: 328 KQCGFVQFVNRADAEEALQALSGSTIGKQAVRLSWGR 364
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 138/302 (45%), Gaps = 24/302 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ G+ Y F++F AA ALA
Sbjct: 58 TTLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDKFNGSAGYCFVDFTSPQAAAKALAL 117
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
++ + K+NWAS G ++D Y IFVGDL PE+ L F F
Sbjct: 118 NGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQGRFQSC 177
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 178 KSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTATPKNKGGNQG 237
Query: 183 RKRQNSHTKTITFDEVYNQSSPT-----------------NCTVYCGGFGKDLNEELVSK 225
+Q +Y +PT N TV+ GG + E+ +
Sbjct: 238 MMQQGMGGMAPQMG-MYTMGAPTMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRS 296
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 297 FFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNSG 355
Query: 286 LA 287
A
Sbjct: 356 PA 357
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTV 58
C+E++ T++VG+L + E L + F G V KVIR ++ Y F+EF H
Sbjct: 97 CEENK--TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHAS 154
Query: 59 AATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A AL V ++ K+NWAS + + + ++ + IFVGDL+ ++ + L E F
Sbjct: 155 AEKALQNFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELF 214
Query: 117 AP-FGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ + + +++ D T +S+GY FV F + +A++ MNG + +R IR +T
Sbjct: 215 SSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGPAT-- 272
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P ++ ++ ++ +N TVY GG +++E+ + K F+ +G +
Sbjct: 273 -PRRSSGDSGSSTPG--------HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLAS 323
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+++ K FV+F ++ A A++ ++ + I V+ WG+
Sbjct: 324 VKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQAVRLSWGR 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 33/192 (17%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
A S GN +++ + I+VGDL ++ L F P GE+ +++R+ QT +S+GY
Sbjct: 90 AGSGGNGCEENKT----IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYG 145
Query: 141 FVSFVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEV 198
FV F A AE A+ G + R+ + NW++ +M +R EV
Sbjct: 146 FVEFFSHASAEKALQNFTGHVMPNTDRAFKLNWASY---SMGEKRS------------EV 190
Query: 199 YNQSSPTNCTVYCGGFGKDLNEELVSKVFSP-------FGTIVDIRVFKEKGYAFVKFTT 251
++ +++ G D+ +E++ ++FS I+D + +GY FV+F
Sbjct: 191 -----ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGD 245
Query: 252 KETATHAIESIH 263
+HA+ ++
Sbjct: 246 DNDKSHAMSEMN 257
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S T+YVG LD +V+E+ L F++ G + K+ P F++F T A AL
Sbjct: 291 DSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKI---PLGKQCGFVQFASRTDAEEAL 347
Query: 64 AAMNKRVFLEKEMKVNWASSPGN-QPKQDTSN 94
+N + ++ ++++W SP + Q + D+ N
Sbjct: 348 QGLNGSLIGKQAVRLSWGRSPSHKQSRGDSGN 379
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPLRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + + T VY FG+D+++E + ++F +G + +RV
Sbjct: 181 AELGARAREFT-------------NVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDT 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG V
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQV 261
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D T KSKG+ FVSF + +A+ A+ MNG+ L R + + +K NE KR
Sbjct: 221 RVMTD-DTGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK-GERQNELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y L++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF GP +V+ + + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGKSKGFGFVSFERHEDAQKAVDD 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + +++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G ++ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRD 90
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 7 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 66
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + ++ W+ P + +IF+ +L +I+ + L + FA FG + +
Sbjct: 67 QLNYSLIKGRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 123
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C++ D +SKGY FV + AE AI A+NG L + + + ++
Sbjct: 124 CKVATDEHG-RSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISR-------KE 175
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-----F 239
RQ+ +E+ NQ + +Y ++ +E ++F PFG I +
Sbjct: 176 RQSK------IEEMKNQFT----NIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEG 225
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV F T E A A+E++H++D+ G +
Sbjct: 226 KSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKL 258
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD + + L F+ G V CKV E G Y F+ + A TA+ A+
Sbjct: 96 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 155
Query: 67 NKRVFLEKEMKV-NWASSPGNQPK-QDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + S Q K ++ N + +I+V ++ PE+ + + F PFG I+
Sbjct: 156 NGMLLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRIT 215
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + D + KS+G+ FV+F EA A+ A++ + R + + +K
Sbjct: 216 SAVLQVDDEG-KSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKA------- 267
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+R+ ++ ++ S +Y D+++E + F PFG I +V ++
Sbjct: 268 EREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVMRDEK 327
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDI 267
KG+ FV F++ + AT A+ ++N I
Sbjct: 328 GISKGFGFVCFSSPDEATKAVAEMNNKMI 356
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGC--KVIREPGNDPYAFLEFVHHTVAAT 61
++Q T +YV N+D VT+E LF G + +V E + + F+ F H A
Sbjct: 184 KNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHA 243
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ A++ +++F+ E+E ++ + K ++++ +L +I+
Sbjct: 244 AVEALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDID 303
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
+ L+ F PFG I++ +++RD + + SKG+ FV F EA A+ MN + +G++ +
Sbjct: 304 DERLRGEFEPFGNITSAKVMRDEKGI-SKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 362
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 363 VSLAQRR------EVRRQQLESQIAQRNQIRMQQA 391
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETA 255
S+ + ++Y G + E ++ ++F+ G + IRV ++ GYA+V +
Sbjct: 2 SAAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADG 61
Query: 256 THAIESIHNTDINGHTVKCFW 276
A+E ++ + I G + W
Sbjct: 62 ERALEQLNYSLIKGRACRIMW 82
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E K
Sbjct: 220 VKVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 278 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T E K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K D + + +Y +++E + K FSPFGTI +V E
Sbjct: 278 RKFEQMKQ---DRI---TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWA----------SSPGNQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|388851777|emb|CCF54583.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Ustilago hordei]
Length = 403
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAATALAAMN 67
++V NL + TE LC +F +G ++ KV+ R G Y F+E+V A A+ M+
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVGGLVYGFVEYVDAASAERAIRTMD 67
Query: 68 KRVFLEKEMKVNWA---------SSP------------GNQPKQDTSNHYHIFVGDLSPE 106
++ +KV WA +SP G + H H+FVGDLSPE
Sbjct: 68 GWLWFGTPIKVTWAKHSMHPDAATSPAAMGEVDPAERGGQVAMHSNAGHSHLFVGDLSPE 127
Query: 107 IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRS 166
++ +L F+ +++ R++ D +T KS+G+ F++F + +AE IT M GQWLG R
Sbjct: 128 VDDASLHALFSRVPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCITTMQGQWLGGRQ 187
Query: 167 IRTNWSTRK 175
IR NW+ +K
Sbjct: 188 IRVNWANQK 196
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+ V +L + L E F G+I + ++V + + Y FV +V A AE AI M
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTS-RPVGGLVYGFVEYVDAASAERAIRTM 66
Query: 158 NG-QWLGSRSIRTNWS--TRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGF 214
+G W G+ I+ W+ + P A T+ +V S+ + ++ G
Sbjct: 67 DGWLWFGT-PIKVTWAKHSMHPDAATSPAA-MGEVDPAERGGQVAMHSNAGHSHLFVGDL 124
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDIN 268
++++ + +FS ++ D+RV K +G+ F+ F ++ A I ++ +
Sbjct: 125 SPEVDDASLHALFSRVPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCITTMQGQWLG 184
Query: 269 GHTVKCFWGKESENN 283
G ++ W + N
Sbjct: 185 GRQIRVNWANQKNQN 199
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDP-YAFLEFVHHTVAATALAAM 66
L+VG+L V + L ALFS++ + +V+ E G + F+ F A T + M
Sbjct: 119 LFVGDLSPEVDDASLHALFSRVPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCITTM 178
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHI--FVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++VNWA NQ Q+ I GD +Q+ + APF +
Sbjct: 179 QGQWLGGRQIRVNWA----NQKNQNQPPLTAITTISGDYPTAYPSQSQQRP-APF----S 229
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
++V T + N+IT R R + +
Sbjct: 230 TKLVLSSYT--------------STPSNSIT--------DRPRFPGLPRRHTAGFDSSTQ 267
Query: 185 RQNSHTKTITFDEVYNQS-SPTNCTVYCGGFGKDLNEELVSKVFSPF--GTIVDIRVFKE 241
N T+ +V + + SP +VY G + + + ++F+PF G ++ R+
Sbjct: 268 PTNPSLTHKTYSQVLSSAPSPDLTSVYVGNLSPLTSRQDLLRMFAPFNHGQPLEARIPSG 327
Query: 242 KGYAFVKFTTKETATHAI--ESIHNTDINGHTVKCFWGKESE 281
+GY F+K T+ E A AI SI ++ ++ W K+ E
Sbjct: 328 RGYGFIKLTSHEQAASAICTLSIQGVFMHSRWLRFGWQKDRE 369
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 98 IFVGDLSPEIETQTLKEAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
++VG+LSP Q L FAPF G+ RI +GY F+ +A +AI
Sbjct: 293 VYVGNLSPLTSRQDLLRMFAPFNHGQPLEARIP------SGRGYGFIKLTSHEQAASAIC 346
Query: 156 AMN--GQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
++ G ++ SR +R W + P + + + Q S + ++SSP+N
Sbjct: 347 TLSIQGVFMHSRWLRFGWQKDREPGVRGDMRTQRSESDPAP--GFRSRSSPSNS 398
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ ++L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E K
Sbjct: 220 VKVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 278 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKAKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQI 261
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ ++L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 TLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T +S YA+V+F +AE A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRRSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N +++ S FG I+ +V + KGY FV F T E A AIE ++ T +N K
Sbjct: 110 INNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------KAKEFPNVYIKNFG 199
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + + F +G + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV F E A A++ ++ D+NG + F G+
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI--FVGR 265
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D KS+G+ FVSF + +A+ A+ MNG+ L ++I + +K T +RK
Sbjct: 221 KVMTDDHG-KSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K F+PFG+I +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L F Q G KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDD 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQD Y +++V +L I
Sbjct: 251 MNGKDLNGKAIFVGRAQKKVERQTELKRKF-----EQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFTPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 19/274 (6%)
Query: 18 SVTEELLCA---LFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF 71
S T + C+ +F + V KVIR ++ Y F+EF H A L +
Sbjct: 58 SCTGDGKCSFVRMFGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIM 117
Query: 72 --LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEISNCRIV 128
++ ++NWAS + D ++ + IFVGDL+ ++ TL E F+ + + ++V
Sbjct: 118 PNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVV 177
Query: 129 RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNS 188
D T +SKGY FV F E +A+T MNG + +R +R +T R+ S
Sbjct: 178 IDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPAT----------PRKTS 227
Query: 189 HTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVK 248
T T + TN TV+ GG +++E+ + + FS +G I +++ K FV+
Sbjct: 228 GTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQ 287
Query: 249 FTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
F ++ A A++ ++ + I TV+ WG+ N
Sbjct: 288 FVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPAN 321
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+E+ L FSQ G + K+ P F++FV A AL +N
Sbjct: 246 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKI---PVGKQCGFVQFVQRKNAEDALQGLN 302
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ ++++W +P N Q + D + ++
Sbjct: 303 GSTIGKQTVRLSWGRNPANKQLRSDNGSQWN 333
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 29/307 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL+
Sbjct: 61 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFSTPEAAAKALS- 119
Query: 66 MNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFG 120
+N ++ + K+NWAS G ++ + + Y IFVGDL PE+ L + F +
Sbjct: 120 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYR 179
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F +A+ + A+T M G + G+R +R + +T K +
Sbjct: 180 STKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTATPKNKSGG 239
Query: 181 NERKRQNSHTKTITFD-------------------EVYNQ-SSPTNCTVYCGGFGKDLNE 220
+ + NQ + P N TV+ GG + E
Sbjct: 240 PGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 299
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 300 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-S 358
Query: 281 ENNSTLA 287
+NNS A
Sbjct: 359 QNNSGPA 365
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
Q ++ +++G+L P I+ ++ + GE N +++RD + + GY FV F
Sbjct: 55 QPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRD-KFSGNAGYCFVDFSTPEA 113
Query: 150 AENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A++ +NGQ + +R + NW++ A + +R +
Sbjct: 114 AAKALS-LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEY------------------ 154
Query: 208 TVYCGGFGKDLNEELVSKVF-SPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
+++ G G ++ E ++ ++F + + + ++ + +GY FV+F + A+
Sbjct: 155 SIFVGDLGPEVTEFVLVQLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALT 214
Query: 261 SIH 263
+
Sbjct: 215 DMQ 217
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
+LYVG LD SVTE L +FS IG V +V R+ + YA++ F H AL
Sbjct: 47 ASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALE 106
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N K ++ W+ P + +IF+ +L P I+ +TL + F+ FG+I +
Sbjct: 107 ELNYTPIKGKACRIMWSQ---RDPSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFGKILS 163
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C+I D + SKG+ FV + + A+ AI +NG L + K +
Sbjct: 164 CKIATD-ENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAK-------KD 215
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
RQ+ + I VY + +E+ + + FSPFGTI I + K+
Sbjct: 216 RQSKMRELIA----------NFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESG 265
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTL 286
+G+ FV F E A A+E ++N DI+G K + G K+SE +L
Sbjct: 266 KSRGFGFVNFEKHEDAVKAVEELNNKDIDGQ--KLYVGRAQKKSERMESL 313
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 28/188 (14%)
Query: 90 QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
Q++ ++VG+L P + L E F+P G++S R+ RD + +S GYA+V+F A+
Sbjct: 41 QNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHAD 100
Query: 150 AENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTV 209
E A+ +N + ++ R WS R P N + +
Sbjct: 101 GEKALEELNYTPIKGKACRIMWSQRDPSLRRN-----------------------GSGNI 137
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHN 264
+ ++ + + FS FG I+ ++ + KG+ FV + E+A AIE+++
Sbjct: 138 FIKNLHPAIDNKTLHDTFSAFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNG 197
Query: 265 TDINGHTV 272
+N H V
Sbjct: 198 MLLNDHEV 205
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +YV N++++ E+ L FS G + + ++ + F+ F H A A+
Sbjct: 228 TNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 66 MNKRVFLEKEMKVNWASSPGNQ----------PKQDTSNHY---HIFVGDLSPEIETQTL 112
+N + +++ V A + +Q+ N Y ++FV +L I+ L
Sbjct: 288 LNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKL 347
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E F P+G I++ +++ D KSKG+ FV + EA AIT M+ + + + + +
Sbjct: 348 EEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVALA 406
Query: 173 TRK 175
RK
Sbjct: 407 QRK 409
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 201 QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKET 254
Q+S T ++Y G + E + +VFSP G + IRV ++ GYA+V F +
Sbjct: 41 QNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHAD 100
Query: 255 ATHAIESIHNTDINGHTVKCFW 276
A+E ++ T I G + W
Sbjct: 101 GEKALEELNYTPIKGKACRIMW 122
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPT 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP T KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVGSKPLYVALA 368
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 31/294 (10%)
Query: 5 SQP-TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAA 60
SQP T+LYVG LD +VTE +L +FS IGPV +V R+ + YA++ +++ A
Sbjct: 80 SQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAE 139
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL +N + K ++ W+ P + +IF+ +L I+ + L + FA FG
Sbjct: 140 RALEQLNYSLIKNKACRIMWSQ---RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 196
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I +C++ D + SKGY FV +V AE AI +NG L + + +
Sbjct: 197 DILSCKVATD-EHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPR----- 250
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-- 238
R RQ DEV +Q + +Y + E +++VF FG I V
Sbjct: 251 --RDRQ------AKIDEVRSQFT----NLYIKNLPTETTTEELNEVFGKFGPITSAAVQS 298
Query: 239 ---FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG-KESENNSTLAQ 288
K +G+ FV + E+A+ A++++H+ D G+ + K +E ++ L +
Sbjct: 299 DEHGKHRGFGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERDAELKK 352
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
+SP +QP +TS ++VG+L P + L E F+ G +++ R+ RD T +S GYA+
Sbjct: 76 ASPASQP--NTS----LYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAY 129
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V+++ A+AE A+ +N + +++ R WS R P + RK + DE
Sbjct: 130 VNYLNAADAERALEQLNYSLIKNKACRIMWSQRDP----SLRKTGQGNIFIKNLDET--- 182
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETAT 256
++ + + F+ FG I+ +V + KGY FV + T E+A
Sbjct: 183 ----------------IDNKALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAE 226
Query: 257 HAIESIHNTDINGHTV 272
AI+ ++ +N V
Sbjct: 227 AAIKGVNGMQLNDKVV 242
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAAT 61
SQ T LY+ NL T E L +F + GP+ V + + + F+ + +H A+
Sbjct: 261 RSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASK 320
Query: 62 ALAAMNKRVF-------------LEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSP 105
A+ A++ + + E++ ++ A Q K +T+ Y +++V +L
Sbjct: 321 AVDALHDKDYKGNVLYVARAQKRTERDAELKKAHE---QQKYETTLKYQGVNLYVKNLDD 377
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
E + + L+ F PFG I++C++++D + SKG+ FV F EA A+ MNG+ LGS+
Sbjct: 378 EYDDEKLQNEFTPFGTITSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSK 436
Query: 166 SIRTNWSTRK 175
+ + + RK
Sbjct: 437 PLYVSLAQRK 446
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD ++ + L F+ G + CKV + + Y F+ +V A A+ +N
Sbjct: 174 IFIKNLDETIDNKALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVN 233
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDT--------SNHYHIFVGDLSPEIETQTLKEAFAPF 119
+K + V + P++D S ++++ +L E T+ L E F F
Sbjct: 234 GMQLNDKVVFVGI-----HVPRRDRQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKF 288
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI---RTNWSTRKP 176
G I++ + D + K +G+ FV++ A A+ A++ + + R T +
Sbjct: 289 GPITSAAVQSD-EHGKHRGFGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERD 347
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
+ ++Q T T+ + V +Y + ++E + F+PFGTI
Sbjct: 348 AELKKAHEQQKYET-TLKYQGV---------NLYVKNLDDEYDDEKLQNEFTPFGTITSC 397
Query: 237 RVFKE-----KGYAFVKFTTKETATHAIESIH 263
+V K+ KG+ FV F++ + AT A+ ++
Sbjct: 398 KVMKDEKGTSKGFGFVCFSSPDEATKAVAEMN 429
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETA 255
+S N ++Y G + E ++ ++FS G + IRV ++ GYA+V + A
Sbjct: 79 ASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADA 138
Query: 256 THAIESIHNTDINGHTVKCFW 276
A+E ++ + I + W
Sbjct: 139 ERALEQLNYSLIKNKACRIMW 159
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI--FVGR 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEITGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 22/272 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAA 60
E++ TL++G++ + E + +LFS K+IR+ Y FLEF A
Sbjct: 2 ETECKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQ 61
Query: 61 TALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
L +N ++ ++NW + + +TS+ + IFVGDL+P++ + L F A
Sbjct: 62 QVLETLNGQLIPNTMHRFRMNWGAGG---RRIETSDDHSIFVGDLAPDVTDELLLATFNA 118
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + ++V DP T SKG+ FV F K EA+ A+ MNG + SR +R + +T +
Sbjct: 119 RFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER-- 176
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
N+ ++Q T + TN TV+ GG E+ + F G IV ++
Sbjct: 177 ---NKSRQQVGFT--------MGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVK 225
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDING 269
V +G FV++++KE A AI ++ ++G
Sbjct: 226 VPPGRGCGFVQYSSKEAAEVAISQMNGQAVSG 257
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREP---GNDPYAFLEFVHHT 57
+ S +++VG+L VT+ELL A F ++ V+G KV+ +P + + F+ F
Sbjct: 90 IETSDDHSIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKE 149
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQ-------DTSNHYHIFVGDLSPEIETQ 110
A AL MN + M+V+ A+ +Q + + +FVG L P
Sbjct: 150 EADQALQTMNGVYCSSRPMRVSVATERNKSRQQVGFTMGEEEGTNTTVFVGGLDPATTED 209
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQ 160
L+ F G I + ++ +G FV + K AE AI+ MNGQ
Sbjct: 210 ELRARFGALGAIVSVKVP------PGRGCGFVQYSSKEAAEVAISQMNGQ 253
>gi|270015091|gb|EFA11539.1| hypothetical protein TcasGA2_TC016060 [Tribolium castaneum]
Length = 304
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 61/67 (91%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
++ QPKQDTS H+HIFVGDLSPEIETQTL+EAFA FGEIS+CR+VRDPQTLKSKGY F
Sbjct: 72 TTAATQPKQDTSKHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGF 131
Query: 142 VSFVKKA 148
VSF+KKA
Sbjct: 132 VSFIKKA 138
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + +FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVI--FVGR 265
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LK+ F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ +G + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEIGGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 34 VKGCKVIREPG---NDPYAFLEFVHHTVAATALAAMNKRVF--LEKEMKVNWASSPGNQP 88
V KVIR ++ Y F+EF H A L + ++ ++NWAS
Sbjct: 10 VVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDR 69
Query: 89 KQDTSNHYHIFVGDLSPEIETQTLKEAFAP-FGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
+ D ++ + IFVGDL+ ++ TL E F+ + + ++V D T +SKGY FV F
Sbjct: 70 RSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 129
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
E +A+T MNG + +R +R +T R+ S T T + TN
Sbjct: 130 NEKTHAMTEMNGVYCSTRPMRIGPAT----------PRKTSGTSGPTGSAARSDGDLTNT 179
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
TV+ GG +++E+ + + FS +G I +++ K FV+F ++ A A++ ++ + I
Sbjct: 180 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTI 239
Query: 268 NGHTVKCFWGKESEN 282
TV+ WG+ N
Sbjct: 240 GKQTVRLSWGRNPAN 254
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG LD +V+E+ L FSQ G + K+ P F++FV A AL +N
Sbjct: 179 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKI---PVGKQCGFVQFVQRKNAEDALQGLN 235
Query: 68 KRVFLEKEMKVNWASSPGN-QPKQDTSNHYH 97
++ ++++W +P N Q + D + ++
Sbjct: 236 GSTIGKQTVRLSWGRNPANKQLRSDNGSQWN 266
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKAKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHI 261
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ ++L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 TLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T +S YA+V+F +AE A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRRSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N +++ S FG I+ +V + KGY FV F T E A AIE ++ T +N K
Sbjct: 110 INNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------KAKEFPNVYIKNFG 199
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 ---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHYHI---FVGDLSPEIET 109
K+V + E+K + Q KQD Y + +V +L +I+
Sbjct: 253 GKELNGKHIYVGRAQKKVERQTELKRKF-----EQMKQDRITRYQVVNLYVKNLDDDIDD 307
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 308 ERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 170 NWSTRK 175
+ RK
Sbjct: 366 ALAQRK 371
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ ++ R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AI+ ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEITGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 127/273 (46%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N IF+ ++ I+ + L + F+ FG I +C
Sbjct: 72 MNYDVIKGRPIRIMWSQRDPGLRKSGVGN---IFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D + SKGY FV F + A AI MNG L N+RK
Sbjct: 129 KVVCDEKG--SKGYGFVHFETQEAANRAIETMNGMLL------------------NDRKV 168
Query: 186 QNSHTKTITFDEVYNQSSPTNCT-VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
H K+ EV S T VY FG+D +E + +VFS FG + +RV K+
Sbjct: 169 FVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKG 228
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV + E A A+ ++ +ING +
Sbjct: 229 RSRGFGFVNYAHHEDAQKAVNEMNGKEINGKIL 261
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 131/281 (46%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
+++ N+D S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKGSKGYGFVHFETQEAANRAIETMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE +V + S ++++ + + + LKE F+
Sbjct: 161 MLLNDRKVFVGHFKSRKEREVEFGSK--------AMKFTNVYIKNFGEDFTDEKLKEVFS 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + R+++D + +S+G+ FV++ +A+ A+ MNG+ + + + + ++
Sbjct: 213 AFGRTLSVRVMKDEKG-RSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRL- 270
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
E KR+ FD++ +Y +++E + K F+P+GTI
Sbjct: 271 ERQGELKRK--------FDQIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V + KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMTDGSQSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAA 65
T +Y+ N T+E L +FS G +V++ E G + F+ + HH A A+
Sbjct: 191 TNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + +Q KQD Y +++V +L I
Sbjct: 251 MNGKEINGKILYVGRAQKRLERQGELKRKF-----DQIKQDRIQRYQGVNLYVKNLDDSI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ FAP+G I++ +++ D +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFAPYGTITSAKVMTDGS--QSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ R+
Sbjct: 364 YVALAQRR 371
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNYDVIKGRPIRIMWSQRD 90
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEITGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKVKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ ++L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 TLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T +S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRRSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N +++ S FG I+ +V + KGY FV F T E A AIE ++ T +N K
Sbjct: 110 INNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGAKVK--------EFPNVYIKNFG 199
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K+D H
Sbjct: 352 EMNGRIVATKPLYVALA-----QRKEDRQAH 377
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 5 SQP-TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
SQP T+LYVG LD +VTE +L +FS IGPV +V R+ YA++ +++ A
Sbjct: 169 SQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAE 228
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL +N + K ++ W+ P + +IF+ +L I+ + L + FA FG
Sbjct: 229 RALEQLNYSLIKNKACRIMWSQ---RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 285
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I +C++ D + SKGY FV +V AE AI +NG L + + +
Sbjct: 286 DILSCKVATD-EHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPR----- 339
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-- 238
R RQ DEV +Q + +Y + E +++VF FG I V
Sbjct: 340 --RDRQ------AKIDEVRSQFT----NLYIKNLPTETTTEELNEVFGKFGPITSAAVQS 387
Query: 239 ---FKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG-KESENNSTLAQ 288
K +G+ FV + E+A+ A++++H+ D G+ + K +E ++ L +
Sbjct: 388 DEHGKHRGFGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERDAELKK 441
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 82 SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAF 141
+SP +QP +TS ++VG+L P + L E F+ G +++ R+ RD T +S GYA+
Sbjct: 165 ASPASQP--NTS----LYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAY 218
Query: 142 VSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
V+++ A+AE A+ +N + +++ R WS R P + RK + DE
Sbjct: 219 VNYLNAADAERALEQLNYSLIKNKACRIMWSQRDP----SLRKTGQGNIFIKNLDET--- 271
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETAT 256
++ + + F+ FG I+ +V + KGY FV + T E+A
Sbjct: 272 ----------------IDNKALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAE 315
Query: 257 HAIESIHNTDINGHTV 272
AI+ ++ +N V
Sbjct: 316 AAIKGVNGMQLNDKVV 331
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAAT 61
SQ T LY+ NL T E L +F + GP+ V + + + F+ + +H A+
Sbjct: 350 RSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASK 409
Query: 62 ALAAMNKRVF-------------LEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSP 105
A+ A++ + + E++ ++ A Q K +T+ Y +++V +L
Sbjct: 410 AVDALHDKDYKGNVLYVARAQKRTERDAELKKAHE---QQKYETTLKYQGVNLYVKNLDD 466
Query: 106 EIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSR 165
E + + L+ F PFG I++C++++D + SKG+ FV F EA A+ MNG+ LGS+
Sbjct: 467 EYDDEKLQNEFTPFGTITSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSK 525
Query: 166 SIRTNWSTRK 175
+ + + RK
Sbjct: 526 PLYVSLAQRK 535
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD ++ + L F+ G + CKV + + Y F+ +V A A+ +N
Sbjct: 263 IFIKNLDETIDNKALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVN 322
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDT--------SNHYHIFVGDLSPEIETQTLKEAFAPF 119
+K + V + P++D S ++++ +L E T+ L E F F
Sbjct: 323 GMQLNDKVVFVGI-----HVPRRDRQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKF 377
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI---RTNWSTRKP 176
G I++ + D + K +G+ FV++ A A+ A++ + + R T +
Sbjct: 378 GPITSAAVQSD-EHGKHRGFGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERD 436
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
+ ++Q T T+ + V +Y + ++E + F+PFGTI
Sbjct: 437 AELKKAHEQQKYET-TLKYQGV---------NLYVKNLDDEYDDEKLQNEFTPFGTITSC 486
Query: 237 RVFKE-----KGYAFVKFTTKETATHAIESIH 263
+V K+ KG+ FV F++ + AT A+ ++
Sbjct: 487 KVMKDEKGTSKGFGFVCFSSPDEATKAVAEMN 518
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEITGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATA 62
Q TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA A
Sbjct: 62 QKTTLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKA 121
Query: 63 LAAMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APF 119
L + + + K+NWA+ G ++D Y IFVGDL PE+ L F + F
Sbjct: 122 LQLSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 181
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK---- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 182 PSCKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGL 241
Query: 176 ----------PPAMTNERKRQNSHTKTITFDEVYNQ-----SSPTNCTVYCGGFGKDLNE 220
PA + Q + P N TV+ GG + E
Sbjct: 242 PMQGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTE 301
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 302 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-S 360
Query: 281 ENNSTLA 287
+NNS A
Sbjct: 361 QNNSGPA 367
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
T +A + F + VN A PG+ +Q T+ +++G+L P I+ ++ + G
Sbjct: 33 TDPSAQQQMAFQSPDPNVNAAPQPGSGGEQKTT----LWMGELEPWIDENFVRNLWFQMG 88
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPA 178
E + +++RD + + GY FV F A A+ ++GQ + +R + NW+T
Sbjct: 89 EQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKALQ-LSGQPMPNSTRPFKLNWATGG--G 145
Query: 179 MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF-SPFGTIVDIR 237
+ + R + +++ G G ++NE ++ +F S F + +
Sbjct: 146 LADRRDDRGPE-----------------YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAK 188
Query: 238 VFKE------KGYAFVKFTTKETATHAIESIHNT 265
+ + +GY FV+F+ + A+ +
Sbjct: 189 IMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGV 222
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ ++ R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AI+ ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 25/283 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQI-GPVKGCKVIREPGND---PYAFLEFVHHTV 58
+ S TL++G++ TEE + +LFS I G K+IR+ Y F++F +H
Sbjct: 11 NRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHET 70
Query: 59 AATALAAMNKRVFLEKEMK--VNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
A L ++N + ++ +NW + G + +Q + Y +FVGDLSPE+ LK F
Sbjct: 71 AQLVLDSLNGKPIEGTSLRYRLNWGAG-GKRIEQ--APEYSVFVGDLSPEVTDAELKATF 127
Query: 117 -APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ + ++V +P T SK + F+ F + E + A+TAMNG R IR +T++
Sbjct: 128 LGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKR 187
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T+ + + +H + P+N TV+ GG + E+++ F+ G I
Sbjct: 188 ----TSVQGQTGAHA-----------TDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQT 232
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +G AFV F + +A H I ++ T + G V+ WGK
Sbjct: 233 VTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGK 275
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ ++ R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AI+ ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ ++ R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AI+ ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E K
Sbjct: 220 VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 278 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATA 62
+ +LYVG+L VTE +L FS +G V ++ R+ YA++ F+H A A
Sbjct: 8 RQASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRA 67
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
L MN V + +++ W+ K N +F+ +L I+ +TL E F+ FG+I
Sbjct: 68 LDTMNFDVIQGQSIRLMWSQRDAYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSVFGKI 124
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D Q S+GY FV F +A A+ AI MNG L ++ P N
Sbjct: 125 LSSKVMCDDQG--SRGYGFVHFQNQAAADRAIEEMNGVLL------KDFRLFVGP-FKNR 175
Query: 183 RKRQNSHTKTITFDEVYNQSSP-TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-- 239
R R+ E+ N++S TN +Y FG ++++E + + FS +G IV ++V
Sbjct: 176 RDREA---------ELQNKASEFTN--IYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTD 224
Query: 240 ---KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTLAQ 288
K KG+ FV F T E A A++ ++ +I G V F G K++E + L Q
Sbjct: 225 SSGKSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQV--FVGRAQKKAERQAELKQ 277
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 131/275 (47%), Gaps = 29/275 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + KV+ + G+ Y F+ F + A A+ MN
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQGSRGYGFVHFQNQAAADRAIEEMNG 159
Query: 69 RVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
L K+ ++ + ++ S +I++ + E++ + LKE F+ +G+I
Sbjct: 160 --VLLKDFRLFVGPFKNRRDREAELQNKASEFTNIYIKNFGDEMDDEKLKEFFSHYGKIV 217
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D KSKG+ FVSF A+ A+ +NG+ + + + + +K
Sbjct: 218 SVKVMTDSSG-KSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAE------ 270
Query: 184 KRQNSHTKTITFDEVYNQSS--PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ + K + F++ + S +Y + ++EE + K FS FG+I+ ++V +E
Sbjct: 271 --RQAELKQL-FEQRKQERSWRVRGTKIYVKNLDETIDEEKLRKAFSSFGSIIRVKVMQE 327
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ + F++ E A A+ ++NG +
Sbjct: 328 EGRSRGFGLICFSSPEEAARAM-----AEMNGRLL 357
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATA 62
S+ T +Y+ N + +E L FS G + KV+ + + F+ F H A A
Sbjct: 187 SEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAAKRA 246
Query: 63 LAAMNKRVFLEKEMKVNWASSPGN----------QPKQDTS---NHYHIFVGDLSPEIET 109
+ +N R +++ V A Q KQ+ S I+V +L I+
Sbjct: 247 VDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDETIDE 306
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++AF+ FG I +++++ +S+G+ + F EA A+ MNG+ LGS+ +
Sbjct: 307 EKLRKAFSSFGSIIRVKVMQEEG--RSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVNI 364
Query: 170 NWSTR 174
+ R
Sbjct: 365 ALAQR 369
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T E KR
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K D + + +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQ---DRI---TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWA----------SSPGNQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L TE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + ++K ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F FG +
Sbjct: 161 MLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 142/318 (44%), Gaps = 35/318 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
+ TTL++G L+ + E + +F + G KVIR+ GN Y F+EF A+
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNAGYCFVEFNSTDAAS 106
Query: 61 TALAAMNKRVFLEKEM-KVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
ALA V M K+NWAS G N + D + IFVGDL PE+ L F A
Sbjct: 107 KALALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQA 166
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-- 175
F + +I+ D T +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 167 RFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNR 226
Query: 176 -------------PPAMTNERKRQNSHT-KTITFDEVYN------------QSSPTNCTV 209
PPAM + + F++ Y + P N TV
Sbjct: 227 NHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTV 286
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 287 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGN 346
Query: 270 HTVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 347 SRVRLSWGR-SQNNSGVG 363
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 77 KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEISNCRIVRDPQTLK 135
N + PGN P N +++G+L P ++ +K FA GE N +++RD ++
Sbjct: 35 NANELTGPGNSPD---GNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRD-KSSG 90
Query: 136 SKGYAFVSFVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTI 193
+ GY FV F A A+ A+NG + +R + NW++ N+R+
Sbjct: 91 NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASG---GGINDRRDDRG----- 141
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAF 246
+++ G G ++NE ++ +F + D + +GY F
Sbjct: 142 -----------PEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGF 190
Query: 247 VKFTTKETATHAI 259
V+FT ++ A+
Sbjct: 191 VRFTDEQDQQRAL 203
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 22/272 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAA 60
E++ TL++G++ + E + +LF+ G K+IR+ Y FLEF A
Sbjct: 2 ETECKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQ 61
Query: 61 TALAAMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
L N +V ++NW + + +TS+ + IFVGDL+P++ + L F +
Sbjct: 62 QVLDTYNGQVIPNTMHRFRMNWGA---GGRRIETSDDHSIFVGDLAPDVTDELLLSTFNS 118
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + ++V DP T SKG+ FV F K EA+ A+ MNG + SR +R + +T +
Sbjct: 119 RFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATER-- 176
Query: 178 AMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIR 237
++ ++Q + + TN TV+ GG E+ + F G IV ++
Sbjct: 177 ---SKSRQQGAFGAP--------EEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVK 225
Query: 238 VFKEKGYAFVKFTTKETATHAIESIHNTDING 269
V +G FV++T+KE A AI ++ T I+G
Sbjct: 226 VPPGRGCGFVQYTSKEAAEVAITQMNGTVISG 257
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 2 CDESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIREP---GNDPYAFLEFVHHT 57
+ S +++VG+L VT+ELL + F S+ V+G KV+ +P + + F+ F
Sbjct: 90 IETSDDHSIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKE 149
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQ-------DTSNHYHIFVGDLSPEIETQ 110
A AL MN + M+V+ A+ +Q + + +FVG L P
Sbjct: 150 EADQALQTMNGVYCSSRPMRVSVATERSKSRQQGAFGAPEEEGTNTTVFVGGLDPSTTED 209
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
L+ F GEI + ++ +G FV + K AE AIT MNG
Sbjct: 210 ELRARFGALGEIVSVKVP------PGRGCGFVQYTSKEAAEVAITQMNG 252
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 32/212 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+++GD+ + + FA GE +++RD T GY F+ F + A+ +
Sbjct: 8 LWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQQVLDTY 67
Query: 158 NGQWLGS--RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
NGQ + + R NW R+ + S +I + G
Sbjct: 68 NGQVIPNTMHRFRMNWGA-------GGRRIETSDDHSI----------------FVGDLA 104
Query: 216 KDLNEELVSKVF-SPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIHNTDIN 268
D+ +EL+ F S F ++ +V + KG+ FV+F +KE A A+++++ +
Sbjct: 105 PDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCS 164
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
++ E + AP N+T
Sbjct: 165 SRPMRVSVATERSKSRQQGAFGAPEEEGTNTT 196
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
+E TT++VG LD S TE+ L A F +G + KV P F+++ A A
Sbjct: 190 EEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKV---PPGRGCGFVQYTSKEAAEVA 246
Query: 63 LAAMNKRVF 71
+ MN V
Sbjct: 247 ITQMNGTVI 255
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS G + +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW--STRKPPAMTNER 183
++V D SKGY FV F + AE AI MNG L R + S ++ A R
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
R+ ++ VY FG D++EE + VF+ +G + IRV
Sbjct: 187 AREFTN-------------------VYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPI 261
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + L++ F +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+G+ FVSF + +A+ A+ MNG+ + + I + +K E KR
Sbjct: 221 RVMTD-DSGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + EE L +F++ G +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDSGKSRGFGFVSFERHEDAQKAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQD Y +++V +L I
Sbjct: 251 MNGKEMNGKPIYVGRAQKKVERQAELKRKF-----EQMKQDRMTRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPFGTITSAKVMLEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGRPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 25/304 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + ++ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 66 TTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKALS 125
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWA+ G ++ ++D + Y IFVGDL PE+ L F + F
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPS 245
Query: 176 -----------PPAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
PPA + NQ + P N TV+ GG + E+ +
Sbjct: 246 GAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 305
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 306 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 364
Query: 284 STLA 287
S A
Sbjct: 365 SGPA 368
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 142/318 (44%), Gaps = 35/318 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
+ TTL++G L+ + E + +F + G KVIR+ GN Y F+EF A+
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNAGYCFVEFNSTDAAS 106
Query: 61 TALAAMNKRVFLEKEM-KVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
ALA V M K+NWAS G N + D + IFVGDL PE+ L F A
Sbjct: 107 KALALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQA 166
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-- 175
F + +I+ D T +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 167 RFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNR 226
Query: 176 -------------PPAMTNERKRQNSHT-KTITFDEVYN------------QSSPTNCTV 209
PPAM + + F++ Y + P N TV
Sbjct: 227 NHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTV 286
Query: 210 YCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 287 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGN 346
Query: 270 HTVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 347 SRVRLSWGR-SQNNSGVG 363
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 77 KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEISNCRIVRDPQTLK 135
N + PGN P N +++G+L P ++ +K FA GE N +++RD ++
Sbjct: 35 NANELTGPGNSPD---GNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRD-KSSG 90
Query: 136 SKGYAFVSFVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTI 193
+ GY FV F A A+ A+NG + +R + NW++ N+R+
Sbjct: 91 NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASG---GGINDRRDDRG----- 141
Query: 194 TFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAF 246
+++ G G ++NE ++ +F + D + +GY F
Sbjct: 142 -----------PEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGF 190
Query: 247 VKFTTKETATHAI 259
V+FT ++ A+
Sbjct: 191 VRFTDEQDQQRAL 203
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 25/304 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + ++ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 66 TTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKALS 125
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWA+ G ++ ++D + Y IFVGDL PE+ L F + F
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPS 245
Query: 176 -----------PPAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
PPA + NQ + P N TV+ GG + E+ +
Sbjct: 246 GAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 305
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 306 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 364
Query: 284 STLA 287
S A
Sbjct: 365 SGPA 368
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 17/252 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAATALAA 65
TL++G+L + + + FS G V+ K+IR+ + Y F+EF A L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEI 122
N ++ ++ ++NWAS+ K+D + Y IFVGDL+ ++ L+E F + +
Sbjct: 147 YNGQMMPNVDLTFRLNWASA---GEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 203
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTN 181
++V D T+++KGY FV F E A+T MNG SR +R ++RK
Sbjct: 204 KGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAGGVV 263
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+ + NS +++ P N T++ GG ++ E+++ + FSP+G ++ +++
Sbjct: 264 QERVPNSQGAQ-------SENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVG 316
Query: 242 KGYAFVKFTTKE 253
K FV+F T+
Sbjct: 317 KRCGFVQFVTRR 328
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIREP---GNDPYAFLEFVHHTV 58
D++ T++VG+L VT+ LL F P VKG KV+ + Y F++F T
Sbjct: 171 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTE 230
Query: 59 AATALAAMNKRVFLEKEMKVNWASS------------PGNQPKQ--DTSNHYHIFVGDLS 104
A A+ MN + M++ A+S P +Q Q + N+ IFVG L
Sbjct: 231 QARAMTEMNGMPCSSRPMRIGPAASRKNAGGVVQERVPNSQGAQSENDPNNTTIFVGGLD 290
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P + LK+AF+P+GE+ + +I K FV FV +
Sbjct: 291 PNVTEDVLKQAFSPYGEVIHVKIP------VGKRCGFVQFVTR 327
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 32/206 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
+++GDL ++ + F+ GE+ N +++RD + + +GY FV F +A AE +
Sbjct: 88 LWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQTY 147
Query: 158 NGQWLGSRSI--RTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
NGQ + + + R NW++ KR ++ + T++ G
Sbjct: 148 NGQMMPNVDLTFRLNWASAG-------EKRDDT----------------PDYTIFVGDLA 184
Query: 216 KDLNEELVSKVFSPF-------GTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDIN 268
D+ + L+ + F + D + KGY FVKF A+ ++ +
Sbjct: 185 ADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCS 244
Query: 269 GHTVKCFWGKESENNSTLAQPSAPTT 294
++ +N + Q P +
Sbjct: 245 SRPMRIGPAASRKNAGGVVQERVPNS 270
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS G + +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D++++ + +FS +G + IRV
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDEN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLI 261
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ LK+ F+ +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+G+ FVSF + +A+ A+ MNG+ + + I + +K T E KR
Sbjct: 221 RVMTD-ENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----KE 241
+ K +Y +++E + K FSPFGTI +V +
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMDGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS+ G +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQD Y +++V +L I
Sbjct: 251 MNGKEMNGKLIYVGRAQKKVERQTELKRKF-----EQMKQDRMTRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ D +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPFGTITSAKVMMDGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRD 90
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G ++ F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI--FVGR 265
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD + KSKG+ FVS+ K +A A+ MNG+ + +SI + +K E KR
Sbjct: 221 KVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKSIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 29/277 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG LD SV+E LL +FS IG V +V R+ + YA++ F H
Sbjct: 34 ETSGASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + K ++ W+ + K+ + N I++ +L P I+ ++L E F+ FG
Sbjct: 94 KAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGN---IYIKNLHPAIDNKSLHETFSTFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
I +C++ D + S+G+ FV F +++A +AI A+NG + + + W K
Sbjct: 151 NILSCKVATDDNGV-SRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVSK----- 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+ RQ+ +EV ++ TN +Y + ++E ++FS +G I + K
Sbjct: 205 --KDRQSK------LEEV--KAKFTN--IYVKNIDLETSQEEFEQLFSKYGKITSAVLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ F+ F TA A++ ++ +D G T+
Sbjct: 253 DSEGKLRGFGFINFEDHSTAARAVDELNESDFRGQTL 289
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAMN 67
+Y+ NL ++ + L FS G + CKV + + + F+ F + + A A+ A+N
Sbjct: 128 IYIKNLHPAIDNKSLHETFSTFGNILSCKVATDDNGVSRGFGFVHFENESDARDAIEAVN 187
Query: 68 KRVFLEKEMKVNW-ASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++E+ V W S Q K + + +I+V ++ E + ++ F+ +G+I++
Sbjct: 188 GMLMNDQEVYVAWHVSKKDRQSKLEEVKAKFTNIYVKNIDLETSQEEFEQLFSKYGKITS 247
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+ +D + K +G+ F++F + A A+ +N +++ + +K +
Sbjct: 248 AVLEKDSEG-KLRGFGFINFEDHSTAARAVDELNESDFRGQTLYVGRAQKK-------HE 299
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
RQ K + + ++ +++E + F+PFGTI ++V K+
Sbjct: 300 RQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKDEAG 359
Query: 242 --KGYAFVKFTTKETATHAI 259
+G+ FV F+T E AT AI
Sbjct: 360 SSRGFGFVCFSTPEEATKAI 379
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T +YV N+D+ ++E LFS+ G + + ++ + F+ F H+ AA A+
Sbjct: 219 TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAARAVDE 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQT 111
+N+ F + + V A ++ +Q+ Y ++F+ +L I+ +
Sbjct: 279 LNESDFRGQTLYVGRAQKK-HERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEK 337
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
LK+ FAPFG I++ ++++D + S+G+ FV F EA AIT N Q + + +
Sbjct: 338 LKDEFAPFGTITSVKVMKD-EAGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAI 396
Query: 172 STRK 175
+ RK
Sbjct: 397 AQRK 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 74 KEMKVNWASSP----GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
+++K+ ++P PK +TS ++VG+L P + L + F+P G +S+ R+ R
Sbjct: 13 EQLKIEEQTAPTTTESETPKVETSGA-SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCR 71
Query: 130 DPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSH 189
D T S GYA+V+F AI +N + + R WS R P RK+ + +
Sbjct: 72 DAITNTSLGYAYVNFHDHEAGRKAIEQLNYTLIKGKPCRIMWSQRDPSL----RKKGSGN 127
Query: 190 TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGY 244
+Y ++ + + + FS FG I+ +V + +G+
Sbjct: 128 -------------------IYIKNLHPAIDNKSLHETFSTFGNILSCKVATDDNGVSRGF 168
Query: 245 AFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
FV F + A AIE+++ +N V W
Sbjct: 169 GFVHFENESDARDAIEAVNGMLMNDQEVYVAW 200
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAAT 61
Q TTL++G L+ + E + +++ +G K+IR+ N Y F++F + A
Sbjct: 80 DQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGR 139
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
AL +N +V ++ K+NWAS G ++ + D Y IFVGDL PE+ L F
Sbjct: 140 ALQ-LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQ 198
Query: 118 -PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK- 175
+ + +I+ DP + S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 199 NKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKN 258
Query: 176 --------PPAMTNERKRQNSHTKTITFDEVYNQSS-----------------PTNCTVY 210
P M +Y+ + P N TV+
Sbjct: 259 KSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVF 318
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 319 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 378
Query: 271 TVKCFWGKESENNSTLA 287
V+ WG+ S+NNS A
Sbjct: 379 RVRLSWGR-SQNNSGPA 394
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G ++ F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI--FVGR 265
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD KSKG+ FVS+ K +A A+ MNG+ + +SI + +K E KR
Sbjct: 221 KVMRDCSG-KSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKSIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G ++ F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI--FVGR 265
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ + L+E F+ FG+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RD + KSKG+ FVS+ K +A A+ MNG+ + +SI + +K E K
Sbjct: 220 VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQA-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 278 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKSIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G ++ F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI--FVGR 265
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMN 159
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ + L+E F+ FG+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RD + KSKG+ FVS+ K +A A+ MNG+ + +SI + +K E K
Sbjct: 220 VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQA-ELK 277
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 278 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKSIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ ++L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKVLYDTASAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T + YA+V+F +AE A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRRSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N +++ S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKVLYDTASAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 25/304 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + ++ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 62 TTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAKALS 121
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWA+ G ++ ++D + Y IFVGDL PE+ L F + F
Sbjct: 122 VNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 181
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 182 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPA 241
Query: 176 -----------PPAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
PPA + NQ + P N TV+ GG + E+ +
Sbjct: 242 GGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 301
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 302 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 360
Query: 284 STLA 287
S A
Sbjct: 361 SGPA 364
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L V+E +L FS GP+ +V R+ + YA++ F A
Sbjct: 7 SYPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG
Sbjct: 67 RALETMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F + AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDEHG--SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
ER+ + + K T VY FG+D+++ + ++F FG + ++V
Sbjct: 178 --EREAELGARAKEFT-------------NVYIKNFGEDMDDLRLKRLFGKFGPSLSVKV 222
Query: 239 FKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F E A A+E ++ ++NG +
Sbjct: 223 MTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKI 261
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSKGYGFVHFETRDAAERAIDKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ LK F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D ++ SKG+ FV+F + +A+ A+ MNG+ L + I + +K T E KR
Sbjct: 221 KVMTD-ESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K D + + +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQLKQ---DRI---TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRN 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL PE+ L E F+P G I + R+ RD T +S GYA+V+F + A+AE A+ M
Sbjct: 13 LYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALETM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFIKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + FS FG I+ +V + KGY FV F T++ A AI+ ++ +N K
Sbjct: 110 IDNKALFDTFSAFGNILSCKVVCDEHGSKGYGFVHFETRDAAERAIDKMNGMLLNDR--K 167
Query: 274 CFWGK 278
F G+
Sbjct: 168 VFVGR 172
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAA 65
T +Y+ N + + L LF + GP KV+ + + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGTSKGFGFVNFERHEDAQKAVEE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A G Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + ++KG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG-NDPYAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G N + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRNKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + + A
Sbjct: 352 EMNGRIVATKPLYIALA 368
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ ++ R+ YA++ + + AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IR+ ++K GYA+V +
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
+ A+++++ I G V+ W +
Sbjct: 62 PRDSERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQ---RDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D S+GY FV F A AI MNG L R + ++ +RK ER+
Sbjct: 129 KVVCDENG--SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRK------ERE 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + I F VY FG D++++ + ++FS FG + ++V
Sbjct: 181 AEVG-ARAIEF-----------TNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F E A A+ ++ +ING +
Sbjct: 229 RSKGFGFVNFEKHEEAQKAVADMNGKEINGRLL 261
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + + ++++ + +++ L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D +SKG+ FV+F K EA+ A+ MNG+ + R + + ++ +E KR
Sbjct: 221 KVMMD-NNGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKR-LERQSELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K E N+ N +Y +++E + K FSP+GTI +V E
Sbjct: 279 KFEQMK----QERVNRYQGVN--LYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS+ G KV+ + + + F+ F H A A+A
Sbjct: 191 TNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRSKGFGFVNFEKHEEAQKAVAD 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + Q KQ+ N Y +++V +L I
Sbjct: 251 MNGKEINGRLLYVGRAQKRLERQSELKRKF-----EQMKQERVNRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+P+G I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPYGTITSAKVMTEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQ---RDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D S+GY FV F A AI MNG L R + N+ +R R+
Sbjct: 129 KVVCDENG--SRGYGFVHFETHEAANRAIATMNGMLLNDRKVFVGNFKSR--------RE 178
Query: 185 RQNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
R+ + K + F VY FG++++ E + + FS FG + ++V
Sbjct: 179 REAEYGAKAMEF-----------TNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNI 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F + A A+E ++ +ING +
Sbjct: 228 GRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRML 261
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+A MN
Sbjct: 101 IFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAANRAIATMNG 160
Query: 69 RVFLEKEMKV-NWASSPGNQPK--QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V N+ S + + ++++ + E+ + L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D +SKG+ FV+F K +A+ A+ MNG+ + R + + ++ +R
Sbjct: 221 KVMTD-NIGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQKR-------MER 272
Query: 186 QNSHTKTITFDEVYNQ--SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
Q+ + F+++ + S +Y +++E + K FSP+GTI +V E
Sbjct: 273 QSELKR--KFEQIKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 HSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 33/191 (17%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATA 62
T +Y+ N ++ E L FS G KV+ R G + F+ F H A A
Sbjct: 191 TNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRSKG---FGFVNFEKHQDAQKA 247
Query: 63 LAAMN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLS 104
+ MN KR+ + E+K + Q KQ+ + Y +++V +L
Sbjct: 248 VEDMNGKEINGRMLYVGRAQKRMERQSELKRKF-----EQIKQERVSRYQGVNLYVKNLD 302
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
I+ + L++ F+P+G I++ +++ + SKG+ FV F EA A+T MNG+ + +
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 165 RSIRTNWSTRK 175
+ + + RK
Sbjct: 361 KPLYVALAQRK 371
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G+ + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVSTKPLYVALA 368
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKG---CKVIREPGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV C+ + + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPA 404
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 29/307 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 66 MNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFG 120
+N ++ + K+NWAS G ++ + + + IFVGDL PE+ L + F +
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK----- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 242
Query: 176 --------------PPAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNE 220
P M + NQ + P N TV+ GG + E
Sbjct: 243 PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 303 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-S 361
Query: 281 ENNSTLA 287
+NNS A
Sbjct: 362 QNNSGPA 368
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 28/306 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL
Sbjct: 72 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFSSPDAAAKALT- 130
Query: 66 MNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFG 120
+N ++ + K+NWAS G ++ + + Y IFVGDL PE+ L + F +
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K +
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 181 NERKRQNSHTKTITFD------------------EVYNQ-SSPTNCTVYCGGFGKDLNEE 221
+ + NQ + P N TV+ GG + E+
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 222 LVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
+ F FG I +++ KG FV+F + A AI + I V+ WG+ S+
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQ 369
Query: 282 NNSTLA 287
NNS A
Sbjct: 370 NNSGPA 375
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F FG + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T E KR
Sbjct: 221 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K D + + +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQ---DRI---TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDP-YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ E G + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWA----------SSPGNQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFW 276
A A+++++ I G V+ W
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW 86
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVATKPLYVALA-----QRKEERQAH 377
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 28/307 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL+
Sbjct: 75 TTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDFTTPEAAAKALSL 134
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ + K+NWAS G ++D + IFVGDL PE+ L F + F
Sbjct: 135 NGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSC 194
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K +
Sbjct: 195 KSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGGG 254
Query: 183 RKRQNSHTKTITFD---------------------EVYNQ-SSPTNCTVYCGGFGKDLNE 220
+ NQ + P N TV+ GG + E
Sbjct: 255 PPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 314
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 315 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-S 373
Query: 281 ENNSTLA 287
+NNS A
Sbjct: 374 QNNSGPA 380
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAAT 61
Q TTL++G L+ + E + +++ +G K+IR+ N Y F++F + A
Sbjct: 68 DQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPESATR 127
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
AL +N +V ++ K+NWAS G ++ + D Y IFVGDL PE+ L F
Sbjct: 128 ALQ-LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQ 186
Query: 118 PFGEISNCR---IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST- 173
G+ ++C+ I+ DP + S+GY FV F + + + A+ M G + G+R +R + +T
Sbjct: 187 --GKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMRISTATP 244
Query: 174 -RKPPAMTNERKRQNSHTKTITFDEVY----------------NQ-SSPTNCTVYCGGFG 215
K VY NQ + P N TV+ GG
Sbjct: 245 KNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLS 304
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
+ E+ + F FG I +++ KG FV+F + A AI + I V+
Sbjct: 305 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 364
Query: 276 WGKESENNSTLA 287
WG+ S+NNS A
Sbjct: 365 WGR-SQNNSGPA 375
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 137/302 (45%), Gaps = 23/302 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP----GNDPYAFLEFVHHTVAATAL 63
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 64 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFSSPAAAAKAL 123
Query: 64 AAMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APF 119
+ + + K+NWA+ G ++ + D Y IFVGDL PE+ L F + F
Sbjct: 124 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 183
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
+ +I+ DP + S+GY FV F + + + A++ M G + G+R +R + +T K
Sbjct: 184 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 243
Query: 180 TNERKRQNSHTKTITFDEV-------------YNQ-SSPTNCTVYCGGFGKDLNEELVSK 225
+ + NQ + P N TV+ GG + E+ +
Sbjct: 244 GVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRS 303
Query: 226 VFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 304 FFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNSG 362
Query: 286 LA 287
A
Sbjct: 363 PA 364
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ + K N IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGRPVRIMWSQRDPSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + ++F +G + IRV
Sbjct: 181 AEMGARAKEFT-------------NVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDS 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG V
Sbjct: 228 GKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQV 261
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
++VF+ + + + + G + K+ T ++++ + +++ + LKE F +G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAEMGARAKEFT----NVYIKNFGEDMDDEKLKEIFCKYG 215
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R++ D + KSKG+ FVSF + +A+ A+ MNG+ + + + + +K T
Sbjct: 216 PALSIRVMTD-DSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQT 274
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
E KR+ K + +Y L++E + K FSPFGTI +V
Sbjct: 275 -ELKRKFEQMKQDRM------TRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVM 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +F + GP +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 251 MNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 113 KEAFAPFGEISNCRIV 128
++ F+PFG I++ +++
Sbjct: 311 RKEFSPFGTITSAKVM 326
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFW 276
A A+++++ I G V+ W
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW 86
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 22/301 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 64 TTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALS 123
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWA+ G ++ + D Y IFVGDL PE+ L F + F
Sbjct: 124 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 183
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A++ M G + G+R +R + +T K
Sbjct: 184 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 243
Query: 181 NERKRQNSHTKTITFDEV-------------YNQ-SSPTNCTVYCGGFGKDLNEELVSKV 226
+ + NQ + P N TV+ GG + E+ +
Sbjct: 244 VVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 303
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 304 FQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNSGP 362
Query: 287 A 287
A
Sbjct: 363 A 363
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++F FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPN 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII--FVGR 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 221 KVMRDPNG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LF Q G KV+R+P + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 403
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ I G ++ W
Sbjct: 71 TMNFDVIKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 22/298 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 64 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALS 123
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWA+ G ++ + D Y IFVGDL PE+ L F + F
Sbjct: 124 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 183
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A++ M G + G+R +R + +T K
Sbjct: 184 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 243
Query: 181 NERKRQNSHTKTITFDEV-------------YNQ-SSPTNCTVYCGGFGKDLNEELVSKV 226
+ + NQ + P N TV+ GG + E+ +
Sbjct: 244 VVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 303
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 304 FQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNS 360
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 94 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 150
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 151 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 202
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG++++++ + ++FS FG + ++V ++
Sbjct: 203 AELGAKAKEFT-------------NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPS 249
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 250 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 287
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 123 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 182
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 183 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSV 242
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E KR
Sbjct: 243 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELKR 300
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 301 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 354
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 355 KGFGFVCFSSPEEATKAV-----TEMNGRIV 380
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V ++ L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 213 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 272
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 273 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 327
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 328 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 385
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + +Q P
Sbjct: 386 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILSQFQP 425
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 197 EVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFT 250
EV+ + ++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F
Sbjct: 23 EVFFRGHYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ 82
Query: 251 TKETATHAIESIHNTDINGHTVKCFW 276
A A+++++ I G ++ W
Sbjct: 83 QPADAERALDTMNFDVIKGKPIRIMW 108
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 314 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 373
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 374 EMNGRIVGSKPLYVALA-----QRKEERKAH 399
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 24/303 (7%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPAAAAKALT 124
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWAS G ++ +++ + IFVGDL PE+ L F + F
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST--RKPPA 178
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAG 244
Query: 179 MTNERKRQNSHTKTITFDEV-------------YNQ-SSPTNCTVYCGGFGKDLNEELVS 224
F + NQ + P N TV+ GG + E+ +
Sbjct: 245 AGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 304
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 305 SFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNS 363
Query: 285 TLA 287
A
Sbjct: 364 GPA 366
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ ++ R+ G+ YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAM 179
I +C +V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + + VY FG+D+++E + +F FG + + +
Sbjct: 178 --EREAE------------LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVELM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 41/281 (14%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN- 67
++V NLD S+ + L S G + C V+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 68 -----KRVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
++VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + ++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPALSVELMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTNERKRQNSHTK--TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
T E KR K IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQT-ELKRTFEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITS 322
Query: 236 IRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ V + KGY FV F T E A AI+ ++ +NG K
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGQFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP +++ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LY+G+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N +F+ +L I+ + L + F+ FG+I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGN---VFIKNLDDSIDNKALYDTFSAFGDILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D S+GY FV F + A AI MNG L R + + R+R
Sbjct: 129 KVVCD--EYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH-------FKSRRER 179
Query: 186 QNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + K + F VY FG+D++++ + ++FS FG + ++V
Sbjct: 180 ELEYGAKVMEF-----------TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ FV + E A A+ ++ ++NG V
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEAANRAIQTMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ FG +
Sbjct: 161 MLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + +S+G+ FV++ EA+ A+T MNG+ + R + + ++ E KR
Sbjct: 221 KVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRI-ERQGELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K E N+ N +Y ++++ + K FSP+GTI +V E
Sbjct: 279 KFEQIK----QERINRYQGVN--LYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS G KV+ + + F+ + +H A A+
Sbjct: 191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + Q KQ+ N Y +++V +L I
Sbjct: 251 MNGKEVNGRMVYVGRAQKRIERQGELKRKF-----EQIKQERINRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I++ +++ + SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDDRLRKEFSPYGTITSTKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N +F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGN---VFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D S+GY FV F + A AI MNG L R + + R+R
Sbjct: 129 KVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH-------FKSRRER 179
Query: 186 QNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + K + F VY FG+D++++ + ++FS FG + ++V
Sbjct: 180 ELEYGAKVMEF-----------TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ FV + E A A+ ++ ++NG +
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEAANRAIQTMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + L+E F+ FG +
Sbjct: 161 MLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D T +S+G+ FV++ EA+ A++ MNG+ + R I + ++ E KR
Sbjct: 221 KVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRI-ERQGELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K E N+ N +Y ++++ + K FSP+GTI +V E
Sbjct: 279 KFEQIK----QERINRYQGVN--LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS G KV+ + + F+ + +H A A++
Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + Q KQ+ N Y +++V +L I
Sbjct: 251 MNGKEVNGRMIYVGRAQKRIERQGELKRKF-----EQIKQERINRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F+P+G I++ +++ + SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDDRLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 37/320 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
++ TL++G L+ + E + +F + G KVIR+ GN Y F+EF A+
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVEFTSSEAAS 114
Query: 61 TALAAMNKRV-FLEKEMKVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
AL V + K+NWAS G N + D Y IFVGDL PE+ L F A
Sbjct: 115 KALTLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQA 174
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 175 RFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNR 234
Query: 178 AMTNERKRQNSHTKTI----------------------TFDEVYNQ--------SSPTNC 207
++Q+ + + + YN + P N
Sbjct: 235 NHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNT 294
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
TV+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 295 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 354
Query: 268 NGHTVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 355 GNSRVRLSWGR-SQNNSGVG 373
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
P Q +N +++G+L P ++ +K F GE N +++RD +T + GY FV F
Sbjct: 51 PNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRD-KTSGNAGYCFVEFTS 109
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A A+T +NG + +R+ + NW++ N+R+ +I
Sbjct: 110 SEAASKALT-LNGSPVPNSNRAFKLNWASG---GGINDRRDDRGPEYSI----------- 154
Query: 205 TNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTKETATH 257
+ G G ++NE ++ +F + D + +GY FV+FT ++
Sbjct: 155 -----FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQR 209
Query: 258 AI 259
A+
Sbjct: 210 AL 211
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 33/309 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL+
Sbjct: 72 TTLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDFTSPAAAAKALSL 131
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ + K+NWAS G ++D + IFVGDL PE+ L F A F
Sbjct: 132 NGSMIPNTTRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQARFPSC 191
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------P 176
+ +I+ DP + S+GY FV F ++ + + A+T M G + G+R +R + +T K
Sbjct: 192 KSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAG 251
Query: 177 PAMTNERKRQNSHTKTITFD--------------------EVYNQ-SSPTNCTVYCGGFG 215
PA + + NQ + P N TV+ GG
Sbjct: 252 PAGMQMQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTVFVGGLS 311
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCF 275
+ E+ + F FG I +++ KG FV+F + A AI + I V+
Sbjct: 312 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 371
Query: 276 WGKESENNS 284
WG+ S+NNS
Sbjct: 372 WGR-SQNNS 379
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F + A L
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IFV +L I+ + L +AF+ FG I +C
Sbjct: 63 MNLDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSC 119
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L S + ++ +RK ER+
Sbjct: 120 KVVSDENG--SKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKSRK------ERE 171
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + + T VY FG+D++ + ++F FG + ++V
Sbjct: 172 LELGARAREFT-------------NVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDER 218
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV + T E A A++ ++ ++NG +
Sbjct: 219 GRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRI 252
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NL+ S+ L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 92 IFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENGSKGYGFVHFETQESAEKAIEKMNG 151
Query: 69 RVFLEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
V K +KV + ++ ++++ + +++ L E F FG
Sbjct: 152 IVL--KSLKVFVGHFKSRKERELELGARAREFTNVYIKNFGEDMDNARLGEIFGRFGRAL 209
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ +++ D + +SKG+ FVS+ +A+ A+ MNG+ L R I + +K T E
Sbjct: 210 SVKVMTDERG-RSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQKKGERQT-EL 267
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
KR H + I D V + +Y +++E + FSPFGTI +V E
Sbjct: 268 KR---HFEQIKQDRV---TRYQGVNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMMEGG 321
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F+ + A A+ T++NG V
Sbjct: 322 HSRGFGFVCFSAPDEAAKAV-----TEMNGKLV 349
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDP-YAFLEFVHHTVAATALAA 65
T +Y+ N + L +F + G KV+ E G + F+ + H A A+
Sbjct: 182 TNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVDE 241
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + + + V A G Q KQD Y +++V +L I+ + L
Sbjct: 242 MNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERL 301
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+ F+PFG I++ +++ + S+G+ FV F EA A+T MNG+ + S+ + +
Sbjct: 302 RTEFSPFGTITSAKVMMEGG--HSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALA 359
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVYC 211
RK +TN+ R+ ++ +T + PT+ + Y
Sbjct: 360 QRKEERQAHLTNQYMRRMANIQTFANPVLNPYHQPTSSSRYI 401
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F A +E
Sbjct: 2 ASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLE 61
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G V+ W +
Sbjct: 62 TMNLDVIKGKPVRIMWSQRD 81
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD ++ +E L FS G + KV+ E G+ + F+ F AA A+
Sbjct: 283 QGVNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMMEGGHSRGFGFVCFSAPDEAAKAVT 342
Query: 65 AMNKRVFLEKEMKVNWA 81
MN ++ K + V A
Sbjct: 343 EMNGKLVTSKPLYVALA 359
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 33/275 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
+LYVG LD +V+E +L +F+ IGPV +V R+ YA++ + + AL
Sbjct: 52 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGERALE 111
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + ++ W+ P + +IF+ +L I+ + L + FA FG + +
Sbjct: 112 QLNYSLIKGRACRIMWSQ---RDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAFGNVLS 168
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT--NWSTRKPPAMTNE 182
C++ D + +SKGY FV + AE+AI A+NG L + + + S + A +E
Sbjct: 169 CKVATD-EMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYVGHHVSKKDRQAKLDE 227
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+K+Q ++ VY + N++ ++F+PFG + + ++
Sbjct: 228 QKKQFTN-------------------VYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDE 268
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F T E A A++++H++D G +
Sbjct: 269 EGRSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKL 303
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 18/266 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + L F+ G V CKV E G Y F+ + + A +A+ A+
Sbjct: 141 NIFIKNLDDAIDNKALHDTFAAFGNVLSCKVATDEMGRSKGYGFVHYETNEAAESAIKAV 200
Query: 67 NKRVFLEKEMKV-NWASSPGNQPKQDTSNHY--HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + S Q K D +++V ++ PE +E F PFG ++
Sbjct: 201 NGMLLNDKKVYVGHHVSKKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVT 260
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + RD + +S+G+ FV+F EA+ A+ ++ R + + + +K
Sbjct: 261 SAVLQRDEEG-RSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKLFVSRAQKK-------S 312
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK--- 240
+R+ ++ ++ S +Y D+++E + F PFG I +V +
Sbjct: 313 EREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRTEG 372
Query: 241 --EKGYAFVKFTTKETATHAIESIHN 264
KG+ FV F++ + AT A+ ++N
Sbjct: 373 GTSKGFGFVCFSSPDEATKAVAEMNN 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAAT 61
+ Q T +YV N+D ++ LF+ G V + R E + + F+ F H A
Sbjct: 229 KKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQK 288
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIE 108
A+ ++ F +++ V+ A Q K + + Y ++++ +L +++
Sbjct: 289 AVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVD 348
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
+ L++AF PFG I++ +++R + SKG+ FV F EA A+ MN + +GS+ +
Sbjct: 349 DEKLRDAFEPFGAITSAKVMR-TEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLY 407
Query: 169 TNWSTRK 175
+ + R+
Sbjct: 408 VSLAQRR 414
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 32/306 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL+
Sbjct: 67 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALS 126
Query: 65 AMN------KRVFLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF 116
RVF K+NWA+ G ++ + D Y IFVGDL PE+ L F
Sbjct: 127 LNGTPMPNTNRVF-----KLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 181
Query: 117 A-PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F + +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 182 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 241
Query: 176 -------PPAMTNERKRQN---SHTKTITF---DEVYNQ-SSPTNCTVYCGGFGKDLNEE 221
P AM + F + NQ + P N TV+ GG + E+
Sbjct: 242 NKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 301
Query: 222 LVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
+ F FG I +++ KG FV+F + A AI + I V+ WG+ S+
Sbjct: 302 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQ 360
Query: 282 NNSTLA 287
NNS A
Sbjct: 361 NNSGPA 366
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 33/310 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + +F S G KVIR+ GN Y F+EF A AL
Sbjct: 50 TTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVEFQSPDAATKALG 109
Query: 65 AMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGE 121
V ++ K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 110 LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 169
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +I+ D + +S+GY FV F + + + A+ M G + G+R +R ST P N
Sbjct: 170 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRI--STATPKNRGN 227
Query: 182 ERKRQNSHTKTIT-----------------FDEVYNQSS-------PTNCTVYCGGFGKD 217
H F +N ++ P N TV+ GG
Sbjct: 228 HGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFTDPNNTTVFVGGLSGY 287
Query: 218 LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
+ E+ + F FG I +++ KG FV+F + A AI + I V+ WG
Sbjct: 288 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 347
Query: 278 KESENNSTLA 287
+ S+NNS +
Sbjct: 348 R-SQNNSGVG 356
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 28/302 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPAAAAKALT 124
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWAS G ++ +++ + IFVGDL PE+ L F + F
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R ST P
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRI--STATPKNKG 242
Query: 181 NERKRQNSHTKTITFDEVY-----------------NQ-SSPTNCTVYCGGFGKDLNEEL 222
+Y NQ + P N TV+ GG + E+
Sbjct: 243 PGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDE 302
Query: 223 VSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ F FG I +++ KG FV+F + A AI + I V+ WG+ S+N
Sbjct: 303 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQN 361
Query: 283 NS 284
NS
Sbjct: 362 NS 363
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 9/188 (4%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAAT 61
E+ LYVGNLD S+ E+ L F GP+ K+I + N YAF+E++ H A
Sbjct: 79 ETSDKILYVGNLDKSINEDSLKQYFQVGGPIANVKIIVDKNNKYCNYAFVEYLKHHDANV 138
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K +K+NWA DT +++F+GDL+ ++ ++L AF F
Sbjct: 139 ALQTLNGKHIEKKIVKINWAFQSQQSSNDDT---FNLFIGDLNIDVNDESLTAAFKDFPS 195
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
++ D QT +S+GY F SF + +A+ A+ M G+ L R IR NW++++ N
Sbjct: 196 FVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASKR----DN 251
Query: 182 ERKRQNSH 189
++ +Q SH
Sbjct: 252 QQGQQQSH 259
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 30/191 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I +LK+ F G I+N +I+ D K YAFV ++K +A A+ +
Sbjct: 85 LYVGNLDKSINEDSLKQYFQVGGPIANVKIIVDKNN-KYCNYAFVEYLKHHDANVALQTL 143
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + +Q+S+ D+ +N ++ G D
Sbjct: 144 NGKHIEKKIVKINWAFQS---------QQSSN------DDTFN--------LFIGDLNID 180
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+N+E ++ F F + V D++ + +GY F F+T+ A A++ + ++NG
Sbjct: 181 VNDESLTAAFKDFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRP 240
Query: 272 VKCFWGKESEN 282
++ W + +N
Sbjct: 241 IRINWASKRDN 251
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
+++ ++ P T Y G + E + + FG I+D + + ++G F+K+ T E A
Sbjct: 328 EDMIRRAPPRVTTAYIGNLPRFATEADLIPLLQNFGFILDFKHYPDRGICFIKYDTHEQA 387
Query: 256 THAIESIHNTDINGHTVKCFWGKE 279
I ++ N + G +K WGKE
Sbjct: 388 AVCIVALANFPLQGRNLKTGWGKE 411
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 169 TNWSTRKPPAMTNERKRQNSHTK----TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
+N +T + PA ++ + ++ T+ + + + ++ +Y G K +NE+ +
Sbjct: 41 SNMTTEQTPAESSSEQTGDNDTEESANVVPANAIRGGRETSDKILYVGNLDKSINEDSLK 100
Query: 225 KVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKE 279
+ F G I ++++ +K YAFV++ A A+++++ I VK W +
Sbjct: 101 QYFQVGGPIANVKIIVDKNNKYCNYAFVEYLKHHDANVALQTLNGKHIEKKIVKINWAFQ 160
Query: 280 SENNS 284
S+ +S
Sbjct: 161 SQQSS 165
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 30/273 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFSQIGPV +V R+ + YA++ + AL
Sbjct: 60 SLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 119
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + +IF+ +L I+ + L + FA FG I +C
Sbjct: 120 LNYTLIKNRPCRIMWSQ---RDPALRKTGQGNIFIKNLDAAIDNKALHDTFAAFGNILSC 176
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D SKGY FV + A+ AI +NG L + + K + R
Sbjct: 177 KVAQDEHG-NSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPK-------KDR 228
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVF 239
Q+ F+E+ +++ TN +Y D+ ++ K+F +G + D
Sbjct: 229 QSK------FEEM--KANYTN--IYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETG 278
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ F+ FTT E+A A+E +++ +I+G +
Sbjct: 279 KSRGFGFINFTTHESAAKAVEELNSREIHGQEL 311
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 112/242 (46%), Gaps = 22/242 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD ++ + L F+ G + CKV + E GN Y F+ + A A+ +N
Sbjct: 149 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAAQQAIKHVN 208
Query: 68 KRVFLEKEMKVNWASSPGNQPKQD--------TSNHYHIFVGDLSPEIETQTLKEAFAPF 119
+ EK++ V + PK+D +N+ +I++ +L ++ ++ F +
Sbjct: 209 GMLLNEKKVYVGH-----HIPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRKLFEQY 263
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G +++ I RD +T KS+G+ F++F A A+ +N + + + + + +K
Sbjct: 264 GAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQELYVGRAQKK---- 319
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
+R+ K+ S +Y ++++E + ++F+P+G I +V
Sbjct: 320 ---HEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDDEKLRELFAPYGPITSAKVM 376
Query: 240 KE 241
+E
Sbjct: 377 RE 378
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 65/233 (27%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGND-PYAFLEFVHHTVAATALA 64
T +Y+ NL VT++ LF Q G V + R E G + F+ F H AA A+
Sbjct: 240 TNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVE 299
Query: 65 AMNKRVFLEKEMKVNWASSPGNQ----------PKQDTSNHY---HIFVGDLSPEIETQT 111
+N R +E+ V A + +Q+ ++ Y ++++ +L E++ +
Sbjct: 300 ELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDDEK 359
Query: 112 LKEAFAPFGEISNCRIVRD----------------------------------------- 130
L+E FAP+G I++ +++R+
Sbjct: 360 LRELFAPYGPITSAKVMRETASESDEEGKETKETEEVKEVKEEEEKPKVEGAAEGEADAS 419
Query: 131 --------PQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
P+ KSKG+ FV F +A A+T MN + + + + + +K
Sbjct: 420 GEKQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVSGKPLYVAIAQKK 472
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
+ ++Y G + + E ++ ++FS G + IRV ++ GYA+V + + A+
Sbjct: 58 SASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 117
Query: 260 ESIHNTDINGHTVKCFW 276
E ++ T I + W
Sbjct: 118 EELNYTLIKNRPCRIMW 134
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 63 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 119
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 120 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 171
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG++++++ + ++FS FG + ++V ++
Sbjct: 172 AELGAKAKEFT-------------NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPS 218
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV + E A A+E ++ +++G +
Sbjct: 219 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 252
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 91 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 150
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 151 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLS 210
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E K
Sbjct: 211 VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELK 268
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 269 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR 322
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 323 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 349
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V ++ L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 182 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 241
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 242 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 296
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 297 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 354
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + +Q P
Sbjct: 355 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILSQFQP 394
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIES 261
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A+++
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 262 IHNTDINGHTVKCFW 276
++ I G ++ W
Sbjct: 63 MNFDVIKGKPIRIMW 77
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 283 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 342
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY 96
MN R+ K + V A + K +N Y
Sbjct: 343 EMNGRIVGSKPLYVALAQRK-EERKAHLTNQY 373
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 88 TMNFDVMKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 196
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++ + ++FS FG + ++V ++
Sbjct: 197 EAELGAKAKEFT-------------NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS 243
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 244 SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 282
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 117 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 176
Query: 68 KRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 177 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 236
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++RD + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E K
Sbjct: 237 VKVMRD-SSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELK 294
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ K S +Y +++E + + FSPFG+I +V E
Sbjct: 295 RKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGR 348
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 349 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 375
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V + L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 267
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 268 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 322
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 323 DDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 380
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + NQ P
Sbjct: 381 YVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPA 421
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 309 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 368
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 369 EMNGRIVGSKPLYVALA-----QRKEERKAH 394
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 139/310 (44%), Gaps = 31/310 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + +F S KVIR+ GN Y F+EF A AL
Sbjct: 44 TTLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGNAGYCFVEFQSPEAATNALG 103
Query: 65 AMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGE 121
K V ++ K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 104 MNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 163
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------ 175
+ +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 164 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 223
Query: 176 ---------PPAMTNERKRQ--NSHTKTITFDEVYNQSS-------PTNCTVYCGGFGKD 217
P M ++Q N +N ++ P N TV+ GG
Sbjct: 224 FGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQFTDPNNTTVFVGGLSGY 283
Query: 218 LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
+ E+ + F FG I +++ KG FV+F + A AI + I V+ WG
Sbjct: 284 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 343
Query: 278 KESENNSTLA 287
+ S+NNS +
Sbjct: 344 R-SQNNSGVG 352
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GN-DPYAFLEFVHHTVA 59
+ +Q TLY+GNLD V ++LL LF Q GPV+ V R+ GN Y F+EF + A
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDA 83
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
AL MN K +++N ++ Q +++ +IF+G+L P+++ +T+ + F+ F
Sbjct: 84 DYALKLMNMVKLYGKSLRLNKSA----QDRRNFDVGANIFLGNLDPDVDEKTIYDTFSTF 139
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
G I +I+RDP+T S+G+ FVSF ++ A+ AMNGQ++ +R I +++ +K
Sbjct: 140 GNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKK 195
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ ++ I+ + L + F+ FG I +C
Sbjct: 72 MNYDVIKGRPIRIMWSQ---RDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D + SKGY FV F + A AI MNG L R + ++ +RK ER+
Sbjct: 129 KVVCDERG--SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRK------ERE 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ TK + F +Y FG +L +E + + FS FG + +RV ++
Sbjct: 181 VEFG-TKVMKF-----------TNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKG 228
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV + E A A++ ++ ++NG +
Sbjct: 229 RSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKII 261
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ N+D S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETQEAANRAIETMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + +I++ + + + LKEAF+ FG+ +
Sbjct: 161 MLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++RD + +S+G+ FV++ +A+ A+ MNG+ + + I + ++ E KR
Sbjct: 221 RVMRDEKG-RSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRL-ERQGELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K D + +Y +++E + K FSP+GTI +V E
Sbjct: 279 KFDQLKQ---DRIQRYQG---VNLYVKNLDDSIDDERLRKEFSPYGTITSAKVMTEAGQS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAA 65
T +Y+ N ++T+E L FS G +V+R E G + F+ + HH A A+
Sbjct: 191 TNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + +Q KQD Y +++V +L I
Sbjct: 251 MNGKEMNGKIIYVGRAQKRLERQGELKRKF-----DQLKQDRIQRYQGVNLYVKNLDDSI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+P+G I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDERLRKEFSPYGTITSAKVM--TEAGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 168 RTNWSTRK 175
+ R+
Sbjct: 364 YVALAQRR 371
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G IV IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNYDVIKGRPIRIMWSQRD 90
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD S+ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVMTEAGQSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ + P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---HDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKAKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ +++G +
Sbjct: 224 TDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQI 261
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF K +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T +S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS H ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWS---------------QHDPSLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------KAKEFPNVYIKNFG 199
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ + P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---HDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKAKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ +++G +
Sbjct: 224 TDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQI 261
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF K +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y D+++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F++ E AT A+ T++NG V
Sbjct: 332 SRGFGFVCFSSPEEATKAV-----TEMNGIIV 358
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T +S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS H ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWS---------------QHDPSLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------KAKEFPNVYIKNFG 199
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L +I+ + L++
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +S+G+ FV F EA A+T MNG + ++ + + + R
Sbjct: 313 AFSPFGTITSAKVMM--EGGRSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYVSLAHR 370
Query: 175 K 175
K
Sbjct: 371 K 371
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 135/301 (44%), Gaps = 25/301 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALT 124
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWAS G ++ +++ + IFVGDL PE+ L F + F
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 244
Query: 181 NERKRQNSHTKTITFD----------------EVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
+ NQ + P N TV+ GG + E+ +
Sbjct: 245 AGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 304
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 305 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 363
Query: 284 S 284
S
Sbjct: 364 S 364
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ + P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPVRIMWSQ---HDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAM 179
I +C++V D SKGY FV F AE AI MNG L R + + +RK
Sbjct: 124 NILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRK---- 177
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
ER+ + K F VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELG-AKAKEFP-----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 223
Query: 240 -----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ +++G +
Sbjct: 224 TDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF K +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 221 KVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRK 279
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT +V N +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQMKQDRITRYQVVN--------LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 332 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + R+ RD T +S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS H ++ V N ++ K
Sbjct: 73 NFDVIKGKPVRIMWS---------------QHDPSLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG I+ +V + KGY FV F T E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--K 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------KAKEFPNVYIKNFG 199
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + + R
Sbjct: 313 AFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 134/313 (42%), Gaps = 30/313 (9%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
E TTL++G L+ + E + +F S G KVIR+ GN Y F+EF A
Sbjct: 24 EQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVEFTTPEAAT 83
Query: 61 TALAAMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-A 117
AL V ++ K+NWAS G ++D Y IFVGDL PE+ L F A
Sbjct: 84 KALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQA 143
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 144 RFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNR 203
Query: 178 AMTNERKRQNSHTKTITFDEVYNQ-----------------------SSPTNCTVYCGGF 214
+ V Q + P N TV+ GG
Sbjct: 204 GNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGL 263
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
+ E+ + F FG I +++ KG FV+F + A AI + I V+
Sbjct: 264 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRL 323
Query: 275 FWGKESENNSTLA 287
WG+ S+NNS +
Sbjct: 324 SWGR-SQNNSGVG 335
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 134/313 (42%), Gaps = 30/313 (9%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
E TTL++G L+ + E + +F S G KVIR+ GN Y F+EF A
Sbjct: 24 EQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVEFTTPEAAT 83
Query: 61 TALAAMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-A 117
AL V ++ K+NWAS G ++D Y IFVGDL PE+ L F A
Sbjct: 84 KALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQA 143
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 144 RFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNR 203
Query: 178 AMTNERKRQNSHTKTITFDEVYNQ-----------------------SSPTNCTVYCGGF 214
+ V Q + P N TV+ GG
Sbjct: 204 GNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGL 263
Query: 215 GKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
+ E+ + F FG I +++ KG FV+F + A AI + I V+
Sbjct: 264 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRL 323
Query: 275 FWGKESENNSTLA 287
WG+ S+NNS +
Sbjct: 324 SWGR-SQNNSGVG 335
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 31/283 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL +
Sbjct: 13 SLYVGDLHNEVTEAMLFEKFSTAGPVVSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 72
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + + + F+ FG I +C
Sbjct: 73 MNFDVLRGRPIRIMWSQ---RDPSLRRSGVGNIFIKNLDKTIDNKAMYDTFSAFGNILSC 129
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV F + A NAIT +NG L + + + R P ER+
Sbjct: 130 KVAQD-EAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKV---FVGRFIPRKDRERE- 184
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+ + VY FG + ++E + + FS +G + +V K
Sbjct: 185 -------------LGEKAKYFTNVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGK 231
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
+G+ FV + + A A + +H D+NG T+ F G+ + N
Sbjct: 232 SRGFGFVCYEDPDAAERACDDMHAKDMNGKTL--FVGRAQKRN 272
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 161/374 (43%), Gaps = 50/374 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + + FS G + CKV + E GN Y F+ F A A+ +
Sbjct: 101 NIFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDEAGNSKGYGFVHFETEESAVNAITKV 160
Query: 67 N------KRVFLEKEM-KVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
N K+VF+ + + + + G + K T ++++ + E + + L E F+ +
Sbjct: 161 NGMLLNGKKVFVGRFIPRKDRERELGEKAKYFT----NVYIKNFGDEFDDEKLFECFSKY 216
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAM 179
G++++ +++ KS+G+ FV + AE A M+ + + +++ + ++
Sbjct: 217 GKVTSHKVMSSDDG-KSRGFGFVCYEDPDAAERACDDMHAKDMNGKTLFVGRAQKRNERQ 275
Query: 180 TNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF 239
T E +R+ K E N+ N +Y +++E + K F+P+GTI +V
Sbjct: 276 T-ELRRKFEQMKI----ERLNRYQGVN--LYVKNLDDTIDDERLRKEFAPYGTITSAKVM 328
Query: 240 KE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV--KCFWGKESENNSTLAQPSAP 292
E G+ FV F++ E AT A+ T++NG + K + LAQ
Sbjct: 329 TEGGRNKGGFGFVCFSSPEEATKAV-----TEMNGRILVSKPLY-------VALAQRKED 376
Query: 293 TTPQPNSTAPQ-FPYIYNQQMGYWY-PQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVG 350
Q S Q + QQMG + P Y A PQ+FY Q+
Sbjct: 377 RKAQLASQYMQRMAGMRMQQMGQMFQPGGPGYFMPAPIQPQRFYTPAQMAQ--------F 428
Query: 351 RQVPGWQGIPGAQP 364
R P W P +P
Sbjct: 429 RATPRWSAQPQPRP 442
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N +E L FS+ G V KV+ + F+ + A A
Sbjct: 193 TNVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGKSRGFGFVCYEDPDAAERACDD 252
Query: 66 MN------KRVFLEKEMKVNWASSPGN----QPKQDTSNHY---HIFVGDLSPEIETQTL 112
M+ K +F+ + K N + Q K + N Y +++V +L I+ + L
Sbjct: 253 MHAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ FAP+G I++ +++ + K G+ FV F EA A+T MNG+ L S+ + +
Sbjct: 313 RKEFAPYGTITSAKVMTEGGRNKG-GFGFVCFSSPEEATKAVTEMNGRILVSKPLYVALA 371
Query: 173 TRK 175
RK
Sbjct: 372 QRK 374
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATAL 63
Q LYV NLD ++ +E L F+ G + KV+ E G + + F+ F A A+
Sbjct: 294 QGVNLYVKNLDDTIDDERLRKEFAPYGTITSAKVMTEGGRNKGGFGFVCFSSPEEATKAV 353
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
MN R+ + K + V A ++ Q S + G + Q + + F P G
Sbjct: 354 TEMNGRILVSKPLYVALAQRKEDRKAQLASQYMQRMAG-----MRMQQMGQMFQPGG 405
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 37/320 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
++ TL++G L+ + E + +F + G KVIR+ GN Y F+EF A+
Sbjct: 55 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVEFSSSDAAS 114
Query: 61 TALAAMNKRV-FLEKEMKVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
AL V + K+NWAS G N + D Y IFVGDL PE+ L F A
Sbjct: 115 KALGLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQA 174
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T K
Sbjct: 175 RFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNR 234
Query: 178 AMTNERKRQNSHTKTI----------------------TFDEVYNQ--------SSPTNC 207
+ +Q+ + + + YN + P N
Sbjct: 235 SNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNT 294
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
TV+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 295 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 354
Query: 268 NGHTVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 355 GNSRVRLSWGR-SQNNSGVG 373
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
P Q +N +++G+L P ++ +K F GE N +++RD +T + GY FV F
Sbjct: 51 PNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRD-KTSGNAGYCFVEFSS 109
Query: 147 KAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSP 204
A A+ +NG + +R+ + NW++ N+R+ +I
Sbjct: 110 SDAASKAL-GLNGTPVPNSNRAFKLNWASG---GGINDRRDDRGPEYSI----------- 154
Query: 205 TNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTKETATH 257
+ G G ++NE ++ +F + D + +GY FV+FT ++
Sbjct: 155 -----FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQR 209
Query: 258 AI 259
A+
Sbjct: 210 AL 211
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVMKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++ + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 265
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E KR
Sbjct: 221 KVMRD-SSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V + L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQP 403
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ + G ++ W
Sbjct: 71 TMNFDVMKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L+ +V EE L LFSQ+ + +V R+ YA++ F + A+ A+
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N K +++ ++ P S H ++F+ +L I+ + L + FA FG + +C
Sbjct: 96 LNFTPLNGKPIRIMFSQ---RDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSC 152
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + +SKGY FV F + A+NAI +NG + + + R+ ER++
Sbjct: 153 KVALD-SSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRR-----QEREQ 206
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
N SP VY + +E + K+F P+GTI V K+
Sbjct: 207 TN--------------GSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGK 252
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + FV F ++A A+E ++ T IN V
Sbjct: 253 SRCFGFVNFQNPDSAAAAVERLNGTTINNDRV 284
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 38/369 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NLD S+ + L F+ G V CKV + Y F++F + A A+ +
Sbjct: 124 NVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRL 183
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISNC 125
N + +K++ V + + + S + +++V +LS + LK+ F P+G I++
Sbjct: 184 NGMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSA 243
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTNERK 184
+++D KS+ + FV+F A A+ +NG + + R + + RK +
Sbjct: 244 TVMKDVNG-KSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKA-------E 295
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
R+ I + + +Y ++E + +FS FGTI +V
Sbjct: 296 REAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNG 355
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNS 299
+ KG FV F+T E A+ A+ ++ I + + E Q P
Sbjct: 356 RSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGG 415
Query: 300 TAPQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGW--- 356
AP P + ++P A PQQ Y Y QG G + Q G+
Sbjct: 416 MAP-LP----AGIPLYHPGAPRLA------PQQLY------YGQGTPGFMPPQPAGFSFQ 458
Query: 357 -QGIPGAQP 364
Q +PG +P
Sbjct: 459 QQILPGMRP 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +YV NL + T+E L LF G + V+++ + F+ F + AA A+
Sbjct: 214 TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVER 273
Query: 66 MN------KRVFL--EKEMKVNWASSPGNQPKQDTSNHY------HIFVGDLSPEIETQT 111
+N RV + K + + +Q+ + Y ++++ +L +
Sbjct: 274 LNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEK 333
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
LK+ F+ FG I++C+++ D +SKG FVSF EA A+ MNG+ +G + +
Sbjct: 334 LKDLFSEFGTITSCKVMIDSNG-RSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAV 392
Query: 172 STRK 175
+ RK
Sbjct: 393 AQRK 396
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
N ++Y G ++NEE + +FS I IRV +++ GYA+V F + A++A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 260 ESIHNTDINGHTVKCFWGKES 280
E ++ T +NG ++ + +
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRD 114
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHT 57
++ Q LY+ NLD S ++E L LFS+ G + CKV+ R G+ F+ F
Sbjct: 313 EKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGS---GFVSFSTPE 369
Query: 58 VAATALAAMNKRVFLEKEMKVNWA 81
A+ AL MN ++ K + V A
Sbjct: 370 EASKALNEMNGKLIGRKPLYVAVA 393
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E T LYVGNL SV L LF G + +V+ + + Y F+++ A+
Sbjct: 293 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 352
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN-----QPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ MN R+ + ++V A P + QP ++T + ++V +LS + T L
Sbjct: 353 EAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET-DMAKLYVCNLSLSMNTDRLIHL 411
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F PFGE++N ++ +D T SKGY FV + A A+ +NG+ + R I S
Sbjct: 412 FLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG-I 470
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P + N S T+T+ ++ N +Y ++ + + ++F PFG I
Sbjct: 471 PSTLPNSAVESPSTTRTVKEIDMSN--------LYVCNMPSSIDTKKLVELFLPFGKITH 522
Query: 236 IRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
RV F KGY F+KFT E+AT AI +++ + G +
Sbjct: 523 ARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 565
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
E+ LYV NL +S+ + L LF G V KV ++ + Y F+++ AA
Sbjct: 388 ETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAA 447
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQ--------------DTSNHYHIFVGDLSPE 106
A+ +N R+ ++++V + P P D SN ++V ++
Sbjct: 448 EAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMSN---LYVCNMPSS 504
Query: 107 IETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRS 166
I+T+ L E F PFG+I++ R+V DP T +KGY F+ F A AI AMNG +G
Sbjct: 505 IDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEM 564
Query: 167 IRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKV 226
I + P A + + T+ I +Y + P + T +++V+ +
Sbjct: 565 IIVRVAGLSPSASISAVQT----TQDINKSRLYITNLPRSMTA----------DKMVN-L 609
Query: 227 FSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
F+PFG I +V Y+ V + +A A++ + + G
Sbjct: 610 FAPFGQIT--KVLMNLEYSLVWYADAPSAIKAVQHMDGYMVEG 650
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 32/275 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
E + LYV N+ S+ + L LF G + +V+ +P Y F++F A
Sbjct: 490 EIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESAT 549
Query: 61 TALAAMNKRVFLEKEMKVNWA------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+AAMN + + + V A S Q QD N +++ +L + +
Sbjct: 550 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDI-NKSRLYITNLPRSMTADKMVN 608
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
FAPFG+I+ + L + Y+ V + A A+ M+G + + + R
Sbjct: 609 LFAPFGQIT--------KVLMNLEYSLVWYADAPSAIKAVQHMDGYMVEGKRLVVK---R 657
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
TN + K I +Y P++ L E+ +F PFG +V
Sbjct: 658 SELCTTNASQAGGKPIKEIDMANLYVGRVPSS-----------LTEDQFIDLFRPFGRVV 706
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
R+F+ + Y V+F A AI+ + I G
Sbjct: 707 QARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGG 741
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
L K+ + S P + K ++ +++VG+L + + L E F PFG+I R+V D
Sbjct: 273 LHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC 332
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
T S+GY FV + A AI MNG+ + R++ + P+ + ++ + T
Sbjct: 333 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGF--PSSEDNSQQPSKETD 390
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYA 245
+Y +N + + +F PFG + + +V K+ KGY
Sbjct: 391 M--------------AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYG 436
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVK 273
FV++++ A A+ ++ ++G ++
Sbjct: 437 FVQYSSPHHAAEAVIHLNGRLVDGRKIE 464
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+ LY+ NL S+T + + LF+ G + KV+ N Y+ + + A A+ M+
Sbjct: 590 SRLYITNLPRSMTADKMVNLFAPFGQI--TKVLM---NLEYSLVWYADAPSAIKAVQHMD 644
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
KR+ +++ E+ AS G +P ++ + +++VG + + + F PFG
Sbjct: 645 GYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-DMANLYVGRVPSSLTEDQFIDLFRPFG 703
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R+ R + Y V F + A AI ++G +G + + PA +
Sbjct: 704 RVVQARMFR------FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGL--PAES 755
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
N K + T ++ +E Q TN +Y +N E + +F P G I +V
Sbjct: 756 NAAK--GALTSQMSSNE-QGQIDMTN--LYVSHLPSYVNNERLIDLFLPCGQITQAKVVV 810
Query: 241 E------KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
E KG+ FVKF +A A+ ++ ++GH ++
Sbjct: 811 ERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 849
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG + S+TE+ LF G V ++ R Y + F + + AA A+ ++
Sbjct: 681 LYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQRYGMVRFDNPSCAAAAIDHLDGY 737
Query: 70 VFLEKEMKVNWASSP-------GNQPKQDTSNH------YHIFVGDLSPEIETQTLKEAF 116
+ V A P G Q +SN +++V L + + L + F
Sbjct: 738 QIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLF 797
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
P G+I+ ++V + T SKG+ FV F A A+T MNG L + + P
Sbjct: 798 LPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 857
Query: 177 PAMTNERKRQNSH 189
AM++ SH
Sbjct: 858 DAMSSYMAHFYSH 870
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAI 259
N +Y G + + ++F PFG IV RV + +GY FVK++ A+ AI
Sbjct: 296 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 355
Query: 260 ESIHNTDINGHT--VKCFWGKESENNSTLAQPSAPT 293
+ ++ + G V+ SE+NS QPS T
Sbjct: 356 KRMNGRLVEGRALEVRVAGFPSSEDNSQ--QPSKET 389
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHT 57
+ + +Q T+Y+GNLD VT++++ LF Q GPV + ++ + Y F+EF
Sbjct: 12 LYERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEE 71
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ M+ K +KVN AS Q K+ ++F+G+L EI+ +TL E F+
Sbjct: 72 DADYAIKIMHMIKLYGKPIKVNKAS----QDKRTQEVGANLFIGNLDTEIDEKTLYETFS 127
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
FG I + +I+R+P+T SKGY FVS+ ++ A+TAMNGQ+LG++ IR ++ +K
Sbjct: 128 AFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEYAFKK 185
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
I++G+L ++ + E F G + N I +D + + +GY FV F + +A+ AI M
Sbjct: 21 IYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKIM 80
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
+ L + I+ N ++ Q+ T+ + ++ G +
Sbjct: 81 HMIKLYGKPIKVNKAS------------QDKRTQEV------------GANLFIGNLDTE 116
Query: 218 LNEELVSKVFSPFGTIVDIRVFK------EKGYAFVKFTTKETATHAIESIH 263
++E+ + + FS FG I+ ++ + KGY FV + E++ A+ +++
Sbjct: 117 IDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMN 168
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
T+Y G + + +++V ++F G +V++ + K+K GY FV+F ++E A +AI+
Sbjct: 19 ATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIK 78
Query: 261 SIHNTDINGHTVKCFWGKESENNST 285
+H + G +K K S++ T
Sbjct: 79 IMHMIKLYGKPIKV--NKASQDKRT 101
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+LY+G+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N +F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGN---VFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D S+GY FV F A AI MNG L R + + R+R
Sbjct: 129 KVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH-------FKSRRER 179
Query: 186 QNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + K + F VY FG+D++++ + ++FS FG + ++V
Sbjct: 180 ELEYGAKVMEF-----------TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ FV + E A A+ ++ ++NG +
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + L+E F+ FG +
Sbjct: 161 MLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + +S+G+ FV++ EA+ A++ MNG+ + R I + ++ + E KR
Sbjct: 221 KVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQS-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K E N+ N +Y ++++ + K F P+GTI +V E
Sbjct: 279 KFEQIK----QERINRYQGVN--LYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS G KV+ + + F+ + +H A A++
Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + Q KQ+ N Y +++V +L I
Sbjct: 251 MNGKEVNGRMIYVGRAQKRIERQSELKRKF-----EQIKQERINRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F P+G I++ +++ + SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDDRLRKEFLPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG------YAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ YA++ F A A++
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 25/304 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALT 124
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWAS G ++ +++ + IFVGDL PE+ L F + F
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 244
Query: 181 NERKRQNSHTKTITFD----------------EVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
+ NQ + P N TV+ GG + E+ +
Sbjct: 245 AGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 304
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 305 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 363
Query: 284 STLA 287
S A
Sbjct: 364 SGPA 367
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVMKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++ + ++FS FG + ++V ++
Sbjct: 181 AELGAKAKEFT-------------NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSS 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 265
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E KR
Sbjct: 221 KVMRD-SSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + + FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V + L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQP 403
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G ++ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFW 276
+++ + G ++ W
Sbjct: 71 TMNFDVMKGKPIRIMW 86
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 135/301 (44%), Gaps = 25/301 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + L+ Q+G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALT 124
Query: 65 AMNKRV-FLEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+ + K+NWAS G ++ +++ + IFVGDL PE+ L F + F
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 244
Query: 181 NERKRQNSHTKTITFD----------------EVYNQ-SSPTNCTVYCGGFGKDLNEELV 223
+ NQ + P N TV+ GG + E+ +
Sbjct: 245 AGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 304
Query: 224 SKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
F FG I +++ KG FV+F + A AI + I V+ WG+ S+NN
Sbjct: 305 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNN 363
Query: 284 S 284
S
Sbjct: 364 S 364
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 71 TMNFDVMKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 179
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++ + ++FS FG + ++V ++
Sbjct: 180 EAELGAKAKEFT-------------NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS 226
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 265
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E KR
Sbjct: 221 KVMRD-SSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + + FSPFG+I +V E
Sbjct: 279 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V + L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 306 DDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + NQ P
Sbjct: 364 YVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPA 404
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 352 EMNGRIVGSKPLYVALA-----QRKEERKAH 377
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+LY+G+L VTE +L FS GP+ +V R+ YA++ F A AL
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ K N +F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGN---VFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++V D S+GY FV F A AI MNG L R + + R+R
Sbjct: 129 KVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH-------FKSRRER 179
Query: 186 QNSH-TKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + K + F VY FG+D++++ + ++FS FG + ++V
Sbjct: 180 ELEYGAKVMEF-----------TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ +G+ FV + E A A+ ++ ++NG +
Sbjct: 229 RSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + L+E F+ FG +
Sbjct: 161 MLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + +S+G+ FV++ EA+ A++ MNG+ + R I + ++ + E KR
Sbjct: 221 KVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQS-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K E N+ N +Y ++++ + K F P+GTI +V E
Sbjct: 279 KFEQIK----QERINRYQGVN--LYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L +FS G KV+ + + F+ + +H A A++
Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSE 250
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN KR+ + E+K + Q KQ+ N Y +++V +L I
Sbjct: 251 MNGKEVNGRMIYVGRAQKRIERQSELKRKF-----EQIKQERINRYQGVNLYVKNLDDGI 305
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L++ F P+G I++ +++ + SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 306 DDDRLRKEFLPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 364 YVALAQRK 371
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG------YAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ YA++ F A A++
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G ++ W +
Sbjct: 71 TMNFEVIKGRPIRIMWSQRD 90
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L+ +V EE L LFSQ+ + +V R+ YA++ F + A+ A+
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N K +++ ++ P S H ++F+ +L I+ + L + FA FG + +C
Sbjct: 96 LNFTPLNGKPIRIMFSQ---RDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSC 152
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + +SKGY FV F + A+NAI +NG + + + R+ ER++
Sbjct: 153 KVALD-SSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRR-----QEREQ 206
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
N SP VY + +E + K+F P+GTI V K+
Sbjct: 207 TN--------------GSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGK 252
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ + FV F ++A A+E ++ T IN V
Sbjct: 253 SRCFGFVNFQNPDSAAAAVERLNGTTINNDRV 284
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 38/368 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+++ NLD S+ + L F+ G V CKV + Y F++F + A A+ +N
Sbjct: 125 VFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLN 184
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ +K++ V + + + S + +++V +LS + LK+ F P+G I++
Sbjct: 185 GMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSAT 244
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAMTNERKR 185
+++D KS+ + FV+F A A+ +NG + + R + + RK +R
Sbjct: 245 VMKDVNG-KSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKA-------ER 296
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+ I + + +Y ++E + +FS FGTI +V +
Sbjct: 297 EAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGR 356
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
KG FV F+T E A+ A+ ++ I + + E Q P
Sbjct: 357 SKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGM 416
Query: 301 APQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGW---- 356
AP P + ++P A PQQ Y Y QG G + Q G+
Sbjct: 417 AP-LP----AGIPLYHPGAPRLA------PQQLY------YGQGTPGFMPPQPAGFSFQQ 459
Query: 357 QGIPGAQP 364
Q +PG +P
Sbjct: 460 QILPGMRP 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +YV NL + T+E L LF G + V+++ + F+ F + AA A+
Sbjct: 214 TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVER 273
Query: 66 MN------KRVFL--EKEMKVNWASSPGNQPKQDTSNHY------HIFVGDLSPEIETQT 111
+N RV + K + + +Q+ + Y ++++ +L +
Sbjct: 274 LNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEK 333
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
LK+ F+ FG I++C+++ D +SKG FVSF EA A+ MNG+ +G + +
Sbjct: 334 LKDLFSEFGTITSCKVMIDSNG-RSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAV 392
Query: 172 STRK 175
+ RK
Sbjct: 393 AQRK 396
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
N ++Y G ++NEE + +FS I IRV +++ GYA+V F + A++A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 260 ESIHNTDINGHTVKCFWGKES 280
E ++ T +NG ++ + +
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRD 114
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHT 57
++ Q LY+ NLD S ++E L LFS+ G + CKV+ R G+ F+ F
Sbjct: 313 EKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGS---GFVSFSTPE 369
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH 97
A+ AL MN ++ K + V A Q K++ H
Sbjct: 370 EASKALNEMNGKLIGRKPLYVAVA-----QRKEERKAHLQ 404
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 137/306 (44%), Gaps = 28/306 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + +++ +G K+IR+ N Y F++F AA AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKALG 124
Query: 65 AMNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGE 121
+N + + K+NWAS G ++ + +FVGDL PE+ L + F +
Sbjct: 125 -LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAS 183
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K +
Sbjct: 184 TKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTATPKNKSGGP 243
Query: 182 ERKRQNSHTKTITFD-------------------EVYNQ-SSPTNCTVYCGGFGKDLNEE 221
+ + NQ + P N TV+ GG + E+
Sbjct: 244 GGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTED 303
Query: 222 LVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
+ F FG I +++ KG FV+F + A AI + I V+ WG+ S+
Sbjct: 304 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR-SQ 362
Query: 282 NNSTLA 287
NNS A
Sbjct: 363 NNSGPA 368
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 72 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 131
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 132 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 188
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 189 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 242
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 78 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 136
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 137 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 173
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 174 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 233
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 234 LRINWAAKRD 243
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 331 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 390
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 391 AVCIVALANFPFQGRNLRTGWGKERSN 417
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 74 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 133
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 134 QTLNGKQIENNIVKINWAFQSQQSSS 159
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 36/281 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +
Sbjct: 88 TMNFDVMKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGYAFV F + A+ AI MNG L R + + +RK ER
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ER 196
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+ + + K T VY FG+++++ + ++FS FG + ++V ++
Sbjct: 197 EAELGAKAKEFT-------------NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS 243
Query: 242 ----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +++G + F G+
Sbjct: 244 SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI--FVGR 282
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 118 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 177
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ LKE F+ FG+ +
Sbjct: 178 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSV 237
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RD + KSKG+ FVS+ K +A A+ MNG+ + ++I + +K E KR
Sbjct: 238 KVMRD-SSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQA-ELKR 295
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + + FSPFG+I +V E
Sbjct: 296 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRS 349
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 350 KGFGFVCFSSPEEATKAV-----TEMNGRIV 375
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V + L LFSQ G KV+R+ + F+ + H A A+
Sbjct: 208 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 267
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 268 MNGKEMSGKAIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 322
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 323 DDEKLRREFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 380
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPT 205
+ RK +TN+ ++ + + + + NQ P
Sbjct: 381 YVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPA 421
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 309 QGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 368
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 369 EMNGRIVGSKPLYVALA-----QRKEERKAH 394
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L V E +L FS+ GPV +V R+ + YA++ F A AL
Sbjct: 16 SLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNFQQPADAERALDT 75
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + ++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 76 MNYEPIKGQPCRIMWSQ---RDPSLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILSC 132
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D SKG+ FV F ++ A+ AI +NG+ L + + + P ++
Sbjct: 133 KVATDGNR-HSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKV---YVGKFIP------RK 182
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
SHT F++ Y V+ FG+D + ++ VF +G+IV V K+
Sbjct: 183 DRSHTNG--FNQHY-------TNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGL 233
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKC 274
KG+ FV F + E A+ A++++HN+ +NG V C
Sbjct: 234 SKGFGFVSFESHEAASAAVQAVHNSIVNGRQVYC 267
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 76 MKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLK 135
M VN P P Q ++VGDL P++ L E F+ G + + R+ RD T +
Sbjct: 1 MAVNMNPPPSFPPLQS------LYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKR 54
Query: 136 SKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITF 195
S GYA+V+F + A+AE A+ MN + + + R WS R P ++
Sbjct: 55 SLGYAYVNFQQPADAERALDTMNYEPIKGQPCRIMWSQRDP---------------SLRR 99
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFT 250
V N ++ K ++ + + FS FG I+ +V + KG+ FV F
Sbjct: 100 SGVGN--------IFIKNLDKSIDHKALYDTFSAFGNILSCKVATDGNRHSKGFGFVHFD 151
Query: 251 TKETATHAIESIHNTDINGHTVKCFWGK 278
+E A AIE ++ +N +K + GK
Sbjct: 152 EQEAADLAIEKVNGKLLN--DMKVYVGK 177
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAATALAA 65
T +++ N T+ +L +F + G + V++ E + + F+ F H A+ A+ A
Sbjct: 195 TNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGLSKGFGFVSFESHEAASAAVQA 254
Query: 66 MN------KRVFLEKEMKVNWASSP----GNQPKQDTSNHY---HIFVGDLSPEIETQTL 112
++ ++V+ + K N S + +Q+ + Y ++++ +L + + L
Sbjct: 255 VHNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKNLEDTLGEEKL 314
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
K F+ FG I++ +I+ D + SKG+ FV F EA A+T MNG+ + S+ + +
Sbjct: 315 KSEFSKFGSITSAKIMTD-EFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALA 373
Query: 173 TRK 175
RK
Sbjct: 374 QRK 376
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS G + +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGQPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW--STRKPPAMTNER 183
++V D S+GY FV F AE AI MNG L R + S ++ A R
Sbjct: 129 KVVCDENG--SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
R+ ++ VY FG+D+++E + ++FS FG +RV +
Sbjct: 187 AREFTN-------------------VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDES 227
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+G+ FV F E A A++ ++ ++NG + F G+
Sbjct: 228 GGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIM--FVGR 265
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 131/273 (47%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ FG ++
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D ++ +G+ FVSF +A+ A+ MNG+ L R + + +K ++R
Sbjct: 221 RVMTD-ESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKMERQMELKRR 279
Query: 186 --QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
Q +T + V +Y +++E + K FSPFG+I +V E
Sbjct: 280 FEQMKQDRTTRYQGV---------NLYVKNLDDGIDDERLRKEFSPFGSITSAKVMMEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N + +E L +FS+ G +V+ + G + F+ F +H A A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQKAVDE 250
Query: 66 MNKRVF-------------LEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEIET 109
MN + +E++M++ Q KQD + Y +++V +L I+
Sbjct: 251 MNGKELNGRIMFVGRAQKKMERQMELKRRFE---QMKQDRTTRYQGVNLYVKNLDDGIDD 307
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ +
Sbjct: 308 ERLRKEFSPFGSITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 170 NWSTRK 175
+ RK
Sbjct: 366 ALAQRK 371
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E T LYVGNL SV L LF G + +V+ + + Y F+++ A+
Sbjct: 205 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 264
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN-----QPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ MN R+ + ++V A P + QP ++T + ++V +LS + T L
Sbjct: 265 EAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET-DMAKLYVCNLSLSMNTDRLIHL 323
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
F PFGE++N ++ +D T SKGY FV + A A+ +NG+ + R I S
Sbjct: 324 FLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG-I 382
Query: 176 PPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
P + N S T+T+ ++ N +Y ++ + + ++F PFG I
Sbjct: 383 PSTLPNSAVESPSTTRTVKEIDMSN--------LYVCNMPSSIDTKKLVELFLPFGKITH 434
Query: 236 IRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
RV F KGY F+KFT E+AT AI +++ + G +
Sbjct: 435 ARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 477
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFV--HHTV 58
E+ LYV NL +S+ + L LF G V KV ++ + Y F+++ HH
Sbjct: 300 ETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHH-- 357
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQ--------------DTSNHYHIFVGDLS 104
AA A+ +N R+ ++++V + P P D SN ++V ++
Sbjct: 358 AAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMSN---LYVCNMP 414
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
I+T+ L E F PFG+I++ R+V DP T +KGY F+ F A AI AMNG +G
Sbjct: 415 SSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGG 474
Query: 165 RSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVS 224
I + P A + + T+ I +Y + P + T +++V+
Sbjct: 475 EMIIVRVAGLSPSASISAVQT----TQDINKSRLYITNLPRSMTA----------DKMVN 520
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+F+PFG I +V Y+ V + +A A++ + + G
Sbjct: 521 -LFAPFGQIT--KVLMNLEYSLVWYADAPSAIKAVQHMDGYMVEG 562
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 32/275 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
E + LYV N+ S+ + L LF G + +V+ +P Y F++F A
Sbjct: 402 EIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESAT 461
Query: 61 TALAAMNKRVFLEKEMKVNWA------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+AAMN + + + V A S Q QD N +++ +L + +
Sbjct: 462 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDI-NKSRLYITNLPRSMTADKMVN 520
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
FAPFG+I+ + L + Y+ V + A A+ M+G + + + R
Sbjct: 521 LFAPFGQIT--------KVLMNLEYSLVWYADAPSAIKAVQHMDGYMVEGKRLVVK---R 569
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
TN + K I +Y P++ L E+ +F PFG +V
Sbjct: 570 SELCTTNASQAGGKPIKEIDMANLYVGRVPSS-----------LTEDQFIDLFRPFGRVV 618
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
R+F+ + Y V+F A AI+ + I G
Sbjct: 619 QARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGG 653
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
L K+ + S P + K ++ +++VG+L + + L E F PFG+I R+V D
Sbjct: 185 LHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC 244
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
T S+GY FV + A AI MNG+ + R++ + P+ + ++ + T
Sbjct: 245 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGF--PSSEDNSQQPSKETD 302
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYA 245
+Y +N + + +F PFG + + +V K+ KGY
Sbjct: 303 M--------------AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYG 348
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVK 273
FV++++ A A+ ++ ++G ++
Sbjct: 349 FVQYSSPHHAAEAVIHLNGRLVDGRKIE 376
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+ LY+ NL S+T + + LF+ G + KV+ N Y+ + + A A+ M+
Sbjct: 502 SRLYITNLPRSMTADKMVNLFAPFGQI--TKVLM---NLEYSLVWYADAPSAIKAVQHMD 556
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
KR+ +++ E+ AS G +P ++ + +++VG + + + F PFG
Sbjct: 557 GYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-DMANLYVGRVPSSLTEDQFIDLFRPFG 615
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R+ R + Y V F + A AI ++G +G + + PA +
Sbjct: 616 RVVQARMFR------FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGL--PAES 667
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
N K + T ++ +E Q TN +Y +N E + +F P G I +V
Sbjct: 668 NAAK--GALTSQMSSNE-QGQIDMTN--LYVSHLPSYVNNERLIDLFLPCGQITQAKVVV 722
Query: 241 E------KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
E KG+ FVKF +A A+ ++ ++GH ++
Sbjct: 723 ERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 761
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG + S+TE+ LF G V ++ R Y + F + + AA A+ ++
Sbjct: 593 LYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQRYGMVRFDNPSCAAAAIDHLDGY 649
Query: 70 VFLEKEMKVNWASSP-------GNQPKQDTSNH------YHIFVGDLSPEIETQTLKEAF 116
+ V A P G Q +SN +++V L + + L + F
Sbjct: 650 QIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLF 709
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
P G+I+ ++V + T SKG+ FV F A A+T MNG L + + P
Sbjct: 710 LPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 769
Query: 177 PAMTNERKRQNSH 189
AM++ SH
Sbjct: 770 DAMSSYMAHFYSH 782
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAI 259
N +Y G + + ++F PFG IV RV + +GY FVK++ A+ AI
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 267
Query: 260 ESIHNTDINGHT--VKCFWGKESENNSTLAQPSAPT 293
+ ++ + G V+ SE+NS QPS T
Sbjct: 268 KRMNGRLVEGRALEVRVAGFPSSEDNSQ--QPSKET 301
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
+LYVG LD VTE +L +F+ IGPV +V R+ + YA++ ++++ AL
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALD 133
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N K ++ W+ P + +IF+ +L I+ + L + FA FG + +
Sbjct: 134 QLNYSQIRGKPCRIMWSQ---RDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLS 190
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C++ D L SKGY FV + AE AI A+NG L + + + ++
Sbjct: 191 CKVATDDSGL-SKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVGQHISR-------KE 242
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
RQ+ DE+ +S TN +Y ++ EE +FS FG I + K+
Sbjct: 243 RQSK------IDEM--KSHFTN--LYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEG 292
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG---KESENNSTL 286
KG+ FV F E A A+E + N +I+G V F G K+SE L
Sbjct: 293 NSKGFGFVNFENHEDAQRAVEELDNKEIHGKPV--FVGRAQKKSEREEEL 340
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAA 65
T LYV NLD V EE LFSQ GP+ + + E GN + F+ F +H A A+
Sbjct: 255 TNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHEDAQRAVEE 314
Query: 66 MN------KRVFL---------EKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
++ K VF+ E+E++ + Q K + + Y ++++ +L ++
Sbjct: 315 LDNKEIHGKPVFVGRAQKKSEREEELRKQY-----EQAKYEKAGKYQGSNLYIKNLEDDV 369
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L+ F PFG I++C+++RD + SKG+ FV F EA A++ MN + +G++ +
Sbjct: 370 DDEKLRAEFEPFGTITSCKVMRD-EKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPL 428
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 429 YVALAQRK 436
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 22/268 (8%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG--NDPYAFLEFVHHTVAATALAAM 66
+++ NLD + + L F+ G V CKV + + Y F+ + + A A+ A+
Sbjct: 163 NIFIKNLDQGIDNKALHDTFAAFGTVLSCKVATDDSGLSKGYGFVHYDSNEAAEAAIKAV 222
Query: 67 NKRVFLEKEMKVNW-ASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V S Q K D S+ +++V +L E+ + + F+ FG I+
Sbjct: 223 NGMLLNDKKVFVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPIT 282
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ I +D + SKG+ FV+F +A+ A+ ++ + + + + + +K R
Sbjct: 283 SAVIQKDEEG-NSKGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELR 341
Query: 184 KR--QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
K+ Q + K + +Y D+++E + F PFGTI +V ++
Sbjct: 342 KQYEQAKYEKAGKYQ---------GSNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRD 392
Query: 242 -----KGYAFVKFTTKETATHAIESIHN 264
KG+ FV F++ + AT A+ ++N
Sbjct: 393 EKGTSKGFGFVCFSSPDEATRAMSEMNN 420
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPVRIMWSQ---RDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D S+G+ FV F + A AI MNG L R + ++ +RK ER+
Sbjct: 129 KVVCDENG--SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRK------ERE 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + + F VY FG D+++ + ++FS FG + ++V
Sbjct: 181 AEFG-ARAMEF-----------TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F E A A+ ++ +ING V
Sbjct: 229 RSKGFGFVNFEKHEEAQKAVADMNGKEINGRMV 261
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ + F+ F A A+ MN
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGHGFVHFETQEAATRAIQTMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D T +SKG+ FV+F K EA+ A+ MNG+ + R + + ++ +R
Sbjct: 221 KVMMD-HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR-------LER 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q+ + + S +Y +++E + K FSP+GTI +V E
Sbjct: 273 QSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATA 62
T +Y+ N + + L +FS+ G KV+ R G + F+ F H A A
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTGRSKG---FGFVNFEKHEEAQKA 247
Query: 63 LAAMN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLS 104
+A MN KR+ + E+K + Q KQ+ + Y +++V +L
Sbjct: 248 VADMNGKEINGRMVYVGRAQKRLERQSELKRKF-----EQMKQERVSRYQGVNLYVKNLD 302
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
I+ + L++ F+P+G I++ +++ + SKG+ FV F EA A+T MNG+ + +
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 165 RSIRTNWSTRK 175
+ + + RK
Sbjct: 361 KPLYVALAQRK 371
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G V+ W +
Sbjct: 71 TMNFEVIKGRPVRIMWSQRD 90
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G+ + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVSTKPLYVALA 368
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 134/264 (50%), Gaps = 24/264 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L +F+ IGPV +V R+ YA++ + + A AL A
Sbjct: 42 SLYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHNVNDARRALEA 101
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ K++++ W+ P S ++F+ ++ I+T+ L +AF+P+G+I +C
Sbjct: 102 LKYNEICGKQVRIMWSHR---DPSLRKSGAGNVFIKNIDESIDTKALYDAFSPYGQILSC 158
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D +T +S+GY FV F +A A AI+ NG LG++ I R+ +R
Sbjct: 159 KVATD-ETGRSRGYGFVHFDTEANATRAISDANGMQLGNKKIFVAPFVRRS-------ER 210
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---K 242
+S DE + +Y F ++ NEE++ + FSPFG I + + + +
Sbjct: 211 VSSTKLEDGVDEKF-------TNLYVRNFPENWNEEILKENFSPFGEITSMMMKSDPLGR 263
Query: 243 GYAFVKFTTKETATHAIESIHNTD 266
+AF+ + A AIE+++ D
Sbjct: 264 KFAFINYAENSMAKAAIETMNGKD 287
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S +++ N+D S+ + L FS G + CKV + + FVH A A
Sbjct: 125 KSGAGNVFIKNIDESIDTKALYDAFSPYGQILSCKVATDETGRSRGY-GFVHFDTEANAT 183
Query: 64 AAM---------NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+ NK++F+ ++ + S +++V + + LKE
Sbjct: 184 RAISDANGMQLGNKKIFVAPFVRRSERVSSTKLEDGVDEKFTNLYVRNFPENWNEEILKE 243
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL----GSRSIRTN 170
F+PFGEI++ + DP K +AF+++ + + A+ AI MNG+ G +S
Sbjct: 244 NFSPFGEITSMMMKSDPLGRK---FAFINYAENSMAKAAIETMNGKDFSIKSGDKSTIEG 300
Query: 171 WSTRKPPAMT-----NERKRQNSHTKTITFDEVY--NQSSPTNCTVYCGGFGKDLNEELV 223
T K +R R+++ K +D ++ N+S +Y +N+ +
Sbjct: 301 EDTDKSETKLLVCAHQDRARRHAMLKA-KYDSMHAENKSKYQGVNLYIKNLDDSINDAEL 359
Query: 224 SKVFSPFGTIVDIRVFKEK-----GYAFVKFTTKETATHAIESIH 263
++F FG I +V ++ G+ FV F + E ATHA+ +H
Sbjct: 360 RELFEGFGLITSCKVMVDEHGASLGFGFVCFVSPEDATHAVSEMH 404
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDLSPE+ L E F G +++ R+ RD T KS GYA+V++ +A A+ A+
Sbjct: 43 LYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHNVNDARRALEAL 102
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
+ + +R WS R P +S N V+ +
Sbjct: 103 KYNEICGKQVRIMWSHRDPS---------------------LRKSGAGN--VFIKNIDES 139
Query: 218 LNEELVSKVFSPFGTIVDIRVF-----KEKGYAFVKFTTKETATHAIESIHNTDING 269
++ + + FSP+G I+ +V + +GY FV F T+ AT AI +D NG
Sbjct: 140 IDTKALYDAFSPYGQILSCKVATDETGRSRGYGFVHFDTEANATRAI-----SDANG 191
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G ++ E ++ ++F+ G + IRV ++ GYA+V + A A+E
Sbjct: 41 ASLYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHNVNDARRALE 100
Query: 261 SIHNTDINGHTVKCFW 276
++ +I G V+ W
Sbjct: 101 ALKYNEICGKQVRIMW 116
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ SV+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++++++NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRAQKKNERM 301
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ K +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E LF++ GP+ + ++ + F+ + H A A+ A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ SV+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++++++NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRAQKKNERM 301
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ K +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E LF++ GP+ + ++ + F+ + H A A+ A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS G + +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGQPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG ++++E + ++FS +G + IRV
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDEN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLM 261
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + L+E F+ +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+G+ FVSF + +A+ A+ MNG+ + + + + +K T E KR
Sbjct: 221 RVMTD-ENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K M V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 32/273 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFEVIKGRPVRIMWSQ---RDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D S+G+ FV F + A AI MNG L R + ++ +RK ER+
Sbjct: 129 KVVCDENG--SRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRK------ERE 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----- 239
+ + + F VY FG D+++ + ++FS FG + ++V
Sbjct: 181 AEFG-ARAMEF-----------TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTG 228
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+ KG+ FV F E A A+ ++ +ING V
Sbjct: 229 RSKGFGFVNFEKHEEAQKAVADMNGKEINGRMV 261
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ + F+ F A A+ MN
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGHGFVHFETQEAATRAIETMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ L+E F+ FG+ +
Sbjct: 161 MLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D T +SKG+ FV+F K EA+ A+ MNG+ + R + + ++ +R
Sbjct: 221 KVMMD-NTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR-------LER 272
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q+ + + S +Y +++E + K FSP+GTI +V E
Sbjct: 273 QSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATA 62
T +Y+ N + + L +FS+ G KV+ R G + F+ F H A A
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKG---FGFVNFEKHEEAQKA 247
Query: 63 LAAMN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLS 104
+A MN KR+ + E+K + Q KQ+ + Y +++V +L
Sbjct: 248 VADMNGKEINGRMVYVGRAQKRLERQSELKRKF-----EQMKQERVSRYQGVNLYVKNLD 302
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
I+ + L++ F+P+G I++ +++ + SKG+ FV F EA A+T MNG+ + +
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 165 RSIRTNWSTRK 175
+ + + RK
Sbjct: 361 KPLYVALAQRK 371
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA++ F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ I G V+ W +
Sbjct: 71 TMNFEVIKGRPVRIMWSQRD 90
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G+ + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVSTKPLYVALA 368
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS G + +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGQPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG ++++E + ++FS +G + IRV
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDEN 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K +G+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLM 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ + L+E F+ +G +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSI 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KS+G+ FVSF + +A+ A+ MNG+ + + + + +K T E KR
Sbjct: 221 RVMTD-ENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQT-ELKR 278
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K +Y +++E + K FSPFGTI +V E
Sbjct: 279 KFEQMKQDRMTRY------QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 333 KGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G +V+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K M V A Q KQD Y +++V +L I+ + L
Sbjct: 251 MNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 311 RKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G +D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ SV+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++++++NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRAQKKNERM 301
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ K +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E LF++ GP+ + ++ + F+ + H A A+ A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ SV+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++++++NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRAQKKNERM 301
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ K +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E LF++ GP+ + ++ + F+ + H A A+ A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 330 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 389
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 390 AVCIVALANFPFQGRNLRTGWGKERSN 416
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAI 259
++ +Y G K + E+++ + F G I +I++ +K YAFV++ A A+
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIAL 132
Query: 260 ESIHNTDINGHTVKCFWGKESENNST 285
++++ I + VK W +S+ +S+
Sbjct: 133 QTLNGKQIENNIVKINWAFQSQQSSS 158
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 135/297 (45%), Gaps = 33/297 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIG-PVKGCKVIREPGNDPYAFLEFVHHTVAATALAAM 66
LY+G+LD+S E ++ +++ +G P K++ Y F+ F+ A+ AL
Sbjct: 32 NVLYMGDLDLSWDERVVSQIWASLGEPNVSVKMMNR-----YCFITFLDSLTASNALLKN 86
Query: 67 NKRV--FLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEI-ETQTLKEAFAPFGEIS 123
+ + K +K+NWA Q + SN Y IFVGDLSP + E Q +
Sbjct: 87 GMLIPGYGGKRLKLNWA-----QASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYASTD 141
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP------- 176
+ +IV D T S+GY FV F + ++A+ M G +L R+I+ + K
Sbjct: 142 HAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQGQQ 201
Query: 177 -----------PAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKDLNEELVS 224
P +N Q+ + N + P N TV+ GG + E+ +
Sbjct: 202 HQGQQQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDELR 261
Query: 225 KVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
+ F PFGTIV +++ KG FV++ + +A +AI + I ++ WG+ ++
Sbjct: 262 EYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGFPIANSRIRLSWGRSAK 318
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 34/287 (11%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHT 57
M + Q +LYVG+L VTE L FSQ+G V +V R+ + YA++ + H
Sbjct: 1 MAEHQQNASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHA 60
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A AL +N +K ++ WA P S +IF+ +L+ EI+ + L + F+
Sbjct: 61 DAKHALEELNFEKIHDKPCRIMWAQR---NPAARRSGAGNIFIKNLNKEIDNKALYDTFS 117
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR-TNWSTRKP 176
FG I +C++ D + +S+GY FV F K+ +A+ AI +NG+ L + + T + +RK
Sbjct: 118 AFGTILSCKVAADEKG-ESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRK- 175
Query: 177 PAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
ER++Q T T +Y ++ P + N++L K+F FGTI
Sbjct: 176 -----EREQQGGRTYT----NIYVKNLPDSYAT---------NDDL-KKLFEKFGTITST 216
Query: 237 RVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ K+ +G+ FV F E A A+E+++ +I K F G+
Sbjct: 217 FLAKDENDKSRGFGFVNFENSEAANAAVEAMNEKEIETDR-KLFVGR 262
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 15/269 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL+ + + L FS G + CKV + + Y F+ F A A+ +
Sbjct: 97 NIFIKNLNKEIDNKALYDTFSAFGTILSCKVAADEKGESRGYGFVHFEKEEDAQKAIDTV 156
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIET-QTLKEAFAPFGEISNC 125
N ++ L++ + V S + +Q + +I+V +L T LK+ F FG I++
Sbjct: 157 NGKMLLKQVVTVTKFLSRKEREQQGGRTYTNIYVKNLPDSYATNDDLKKLFEKFGTITST 216
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+ +D + KS+G+ FV+F A A+ AMN + + + R + R ER+
Sbjct: 217 FLAKD-ENDKSRGFGFVNFENSEAANAAVEAMNEKEI--ETDRKLFVGRAMKKHEREREL 273
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ H K + N+ N +Y +D+ E+ + FS FGTI +++ +
Sbjct: 274 KRIHDKIRQERDEKNK----NSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGD 329
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDING 269
+G+ FV F + + A AI+ +H + I+G
Sbjct: 330 SRGFGFVNFDSADEAAAAIQEMHGSMIDG 358
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 8 TTLYVGNL-DVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALA 64
T +YV NL D T + L LF + G + + ++ + + F+ F + A A+
Sbjct: 186 TNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAAVE 245
Query: 65 AMN-------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQ 110
AMN +++F+ E+E ++ Q + + + + ++++ L ++
Sbjct: 246 AMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTED 305
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ F+ FG I++ +I+ D S+G+ FV+F EA AI M+G + + +
Sbjct: 306 ALRDKFSKFGTITSLKIMTDNNG-DSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVA 364
Query: 171 WSTRKPPAMTNERKRQNSHTKTI 193
+ RK +R++Q + +T+
Sbjct: 365 LALRKV-----DRQKQLASRRTM 382
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
N ++Y G ++ E + + FS G+++ IRV ++ GYA+V + A HA+
Sbjct: 7 NASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHAL 66
Query: 260 ESIHNTDINGHTVKCFWGKES 280
E ++ I+ + W + +
Sbjct: 67 EELNFEKIHDKPCRIMWAQRN 87
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 38 KVIREP---GNDPYAFLEFVHHTVAATALAAMNKRVF--LEKEMKVNWASSPGNQPKQDT 92
KVIR ++ Y F+EF H A L + ++ ++NWA+ + D
Sbjct: 2 KVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDN 61
Query: 93 SNHYHIFVGDLSPEIETQTLKEAFA-PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAE 151
IFVGDL+ ++ L E FA + + ++V D T +SKGY FV F + E
Sbjct: 62 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 121
Query: 152 NAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFD-EVYNQSSPTNCTVY 210
A+T MNG + SR +R +T P + +++ +SH + V + N T++
Sbjct: 122 QAMTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIF 179
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
GG ++++E + + FS +G IV +++ KG FV+F + A A++ ++ T I
Sbjct: 180 VGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQ 239
Query: 271 TVKCFWGKESEN 282
TV+ WG+ N
Sbjct: 240 TVRLSWGRNPAN 251
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATAL 63
+S TT++VG LD +V++E L FSQ G + K+ P F++F + A AL
Sbjct: 172 DSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKI---PVGKGCGFVQFANRNNAEDAL 228
Query: 64 AAMNKRVFLEKEMKVNWASSPGNQ 87
+N V ++ ++++W +P N+
Sbjct: 229 QKLNGTVIGKQTVRLSWGRNPANK 252
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L +F+ IGPV +V R+ YA++ F + AL +
Sbjct: 40 SLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERALES 99
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + K ++ W+ + K + N +F+ +L I+ + L + F+ FG I +C
Sbjct: 100 LNYTLIKGKPCRIMWSQRDPSLRKTGSGN---VFIKNLDTSIDNKALHDTFSAFGNILSC 156
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+I D ++ SKGY FV + + A+NAI ++G L + + + R P RK
Sbjct: 157 KIALD-ESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKV---YVGRHIP-----RKE 207
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-----FK 240
+ + + I ++ TN VY + +N+E ++FS FG I V K
Sbjct: 208 RQAKIEQI-------RAKFTN--VYVKNLDESINDEQFKEMFSKFGPITSALVQTDEEGK 258
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ F+ F E A A+++++ T+ NG T+
Sbjct: 259 SKGFGFINFENYEDAHKAVDTLNETEHNGKTL 290
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKV--IREPGNDPYAFLEFVHHTVAATALAA 65
T +YV NLD S+ +E +FS+ GP+ V E + + F+ F ++ A A+
Sbjct: 220 TNVYVKNLDESINDEQFKEMFSKFGPITSALVQTDEEGKSKGFGFINFENYEDAHKAVDT 279
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
+N K+ E+E++ + Q K + Y ++++ +L +I
Sbjct: 280 LNETEHNGKTLYVARAQKKTEREEELRKQY-----EQAKLEKLAKYQGVNLYIKNLDDDI 334
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+ +G I++ +++ D + SKG+ FV F EA A+T MNG+ +GS+ I
Sbjct: 335 DDEKLRQEFSVYGVITSAKVMCDEKGT-SKGFGFVCFSSPDEATKAVTEMNGRMIGSKPI 393
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 394 YVALAQRK 401
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETAT 256
SP+ ++Y G + E ++ ++F+ G + IRV ++ GYA+V F
Sbjct: 36 SPS-ASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGE 94
Query: 257 HAIESIHNTDINGHTVKCFW 276
A+ES++ T I G + W
Sbjct: 95 RALESLNYTLIKGKPCRIMW 114
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 40/317 (12%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAA 60
++ TL++G L+ + E + +F + G KVIR+ GN Y F+EF A+
Sbjct: 53 DANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVEFTSSDAAS 112
Query: 61 TALAAMNKRV-FLEKEMKVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-A 117
AL V + K+NWAS G N + D Y IFVGDL PE+ L F A
Sbjct: 113 KALQLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQA 172
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T P
Sbjct: 173 RFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTAT---P 229
Query: 178 AMTNERKRQNSHTKTI----------------------TFDEVYNQ--------SSPTNC 207
N Q+ + + + YN + P N
Sbjct: 230 KNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNT 289
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
TV+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 290 TVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 349
Query: 268 NGHTVKCFWGKESENNS 284
V+ WG+ S+NNS
Sbjct: 350 GNSRVRLSWGR-SQNNS 365
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 84 PGNQ-PKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFGEISNCRIVRDPQTLKSKGYAF 141
PG Q P Q +N +++G+L P ++ +K F GE N +++RD +T + GY F
Sbjct: 44 PGGQAPIQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRD-KTSGNAGYCF 102
Query: 142 VSFVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVY 199
V F A A+ +NG + +R+ + NW++ N+R+ +I
Sbjct: 103 VEFTSSDAASKALQ-LNGTPVPNSNRAFKLNWASG---GGINDRRDDRGPEYSI------ 152
Query: 200 NQSSPTNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTK 252
+ G G ++NE ++ +F + D + +GY FV+FT +
Sbjct: 153 ----------FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDE 202
Query: 253 ETATHAI 259
+ A+
Sbjct: 203 QDQQRAL 209
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 32/275 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ ++ R+ + YA++ + A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N V + +++ W+ + K +IF+ +L I+ + L + F+ FG I +
Sbjct: 72 LNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 131
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNER 183
C++V D SKGY FV F + AE AI MNG L R + + +RK ER
Sbjct: 132 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ER 183
Query: 184 KRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
+ + + K T VY FG+D+++E + +F FG + ++V
Sbjct: 184 EAELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 230
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 231 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 265
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 105 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 164
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F FG +
Sbjct: 165 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 224
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 225 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 283
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 284 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 335
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 336 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 362
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 25/185 (13%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+P G I + RI RD T +S GYA+V++ + +A+ A+ +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETL 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + R +R WS R P S K+ V N ++ K
Sbjct: 73 NFDVIKGRPVRIMWSQRDP-----------SLRKSGVGGGVGN--------IFIKNLDKS 113
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + FS FG I+ +V + KGY FV F T+E A AIE ++ +N K
Sbjct: 114 IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDR--K 171
Query: 274 CFWGK 278
F G+
Sbjct: 172 VFVGR 176
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + GP KV+ + + F+ F H A A+
Sbjct: 195 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 254
Query: 66 MNKRVFLEKEMKVNWASSPG----------NQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 255 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 314
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 315 RKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 372
Query: 173 TRK 175
RK
Sbjct: 373 QRK 375
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 296 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 355
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 356 EMNGRIVATKPLYVALA 372
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ SV+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEQFQELFAKFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++++++NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGRAQKKNERM 301
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ K +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E LF++ GP+ + ++ + F+ + H A A+ A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F H A A+ MN
Sbjct: 88 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 147
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LKE F+ +G +
Sbjct: 148 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSI 207
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
R++ D + KSKG+ FVSF + +A+ A+ MNG+ L R + + +K +R
Sbjct: 208 RVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKG-------ER 259
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
QN + + + +Y L++E + K FSPFGTI +V E
Sbjct: 260 QNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRS 319
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 320 KGFGFVCFSSPEEATKAV-----TEMNGRIV 345
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 28 FSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVNWASSP 84
FS GP+ +V R+ + YA++ F A AL MN V + +++ W+
Sbjct: 18 FSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRIMWSQ-- 75
Query: 85 GNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
P S +IF+ +L I+ + L + F+ FG I +C++V D SKGY FV F
Sbjct: 76 -RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHF 132
Query: 145 VKKAEAENAITAMNGQWLGSRSIRTNW--STRKPPAMTNERKRQNSHTKTITFDEVYNQS 202
AE AI MNG L R + S ++ A R R+ ++
Sbjct: 133 ETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTN------------- 179
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----KEKGYAFVKFTTKETATH 257
VY FG+D+++E + ++FS +G + IRV K KG+ FV F E A
Sbjct: 180 ------VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQK 233
Query: 258 AIESIHNTDINGHTV 272
A++ ++ ++NG V
Sbjct: 234 AVDDMNGKELNGRQV 248
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 107 IETQTLKEA---FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
I+T +EA F+P G I + R+ RD T +S GYA+V+F + A+AE A+ MN +
Sbjct: 6 IQTLPKREAQQDFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIK 65
Query: 164 SRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELV 223
R +R WS R P +S N ++ K ++ + +
Sbjct: 66 GRPLRIMWSQRDPS---------------------LRKSGVGN--IFIKNLDKSIDNKAL 102
Query: 224 SKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
FS FG I+ +V + KGY FV F T E A AIE ++ +N K F G+
Sbjct: 103 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDR--KVFVGR 159
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ GP +V+ + + F+ F H A A+
Sbjct: 178 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDD 237
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + +++ V A G Q KQD Y +++V +L ++ + L
Sbjct: 238 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 297
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 298 RKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 355
Query: 173 TRK 175
RK
Sbjct: 356 QRK 358
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 279 QGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 338
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 339 EMNGRIVATKPLYVALA 355
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 135/317 (42%), Gaps = 48/317 (15%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL+
Sbjct: 307 TTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDFSSPAAAAKALSL 366
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
+ + K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 367 NGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSC 426
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------- 175
+ +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 427 KSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTATPKNKAGGGG 486
Query: 176 ----------------------------PPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
PP M D P N
Sbjct: 487 PAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGGYGQQQPMNQFTD-------PNNT 539
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDI 267
TV+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 540 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPI 599
Query: 268 NGHTVKCFWGKESENNS 284
V+ WG+ S+NNS
Sbjct: 600 GNSRVRLSWGR-SQNNS 615
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD SV+E LL +FS IGPV +V R+ YA++ F H TA+
Sbjct: 51 SLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIEK 110
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N K ++ W+ K+ N IF+ +L P+I+ + L + F+ FG I +C
Sbjct: 111 LNYSPIKGKPCRIMWSQRDPALRKKGAGN---IFIKNLHPDIDNKALHDTFSVFGNILSC 167
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+I D +T KSKG+ FV F + A A+ A+NG L R + K + R
Sbjct: 168 KIATD-ETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVAQHVSK-------KDR 219
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
++ +EV +++ TN VY D E+ + +FS +G I I + K+
Sbjct: 220 ESK------LEEV--KANFTN--VYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGK 269
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+G+ F+ F + A A+E +++ + G K + G+
Sbjct: 270 FRGFGFINFENHDDAAKAVEELNDLEFKGQ--KLYVGR 305
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T +YV N+DV E+ ALFS+ GP+ + ++ + F+ F +H AA A+
Sbjct: 231 TNVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEE 290
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQT 111
+N F +++ V A + Q+ Y ++FV +L I+ +
Sbjct: 291 LNDLEFKGQKLYVGRAQKKYER-LQELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDDEK 349
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
L+ FAPFG I++ +++R+ + KSK + FV F EA AIT N Q + + +
Sbjct: 350 LEAEFAPFGSITSAKVMRNEEG-KSKNFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 408
Query: 172 STRK 175
+ RK
Sbjct: 409 AQRK 412
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + CK+ E G + F+ F A A+ A+
Sbjct: 139 NIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAI 198
Query: 67 NKRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V S ++ ++ +N +++V ++ + F+ +G I+
Sbjct: 199 NGMMLNGREVYVAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTALFSKYGPIT 258
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D + K +G+ F++F +A A+ +N + + + +K + E
Sbjct: 259 SIAMEKDSEG-KFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQKKYERL-QEL 316
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+Q ++ + + ++ +++E + F+PFG+I +V
Sbjct: 317 KKQYEASR------LEKLAKYQGVNLFVKNLDDSIDDEKLEAEFAPFGSITSAKVMRNEE 370
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K K + FV F+T E AT AI
Sbjct: 371 GKSKNFGFVCFSTPEEATKAI 391
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQI-GPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TL++G L+ + E + ++S + G KVIR+ GN Y F+EF A AL
Sbjct: 48 TLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGNAGYCFVEFPSSEAATKALGL 107
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V ++ K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 108 NGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLFQARFPSC 167
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK------- 175
+ +I+ D T +S+GY FV F +++ + A+ M G + G+R +R + +T K
Sbjct: 168 KSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRISTATPKTRSHQQY 227
Query: 176 --------------PPAMTNE-------RKRQNSHTKTITFD---EVYNQ-SSPTNCTVY 210
PPA + ++ + F+ + NQ + P N TV+
Sbjct: 228 GNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFTDPNNTTVF 287
Query: 211 CGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGH 270
GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 288 VGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 347
Query: 271 TVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 348 RVRLSWGR-SQNNSGVG 363
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG L VTE+ L + F G + K+ P F++FVH A A+ M
Sbjct: 284 TTVFVGGLSGYVTEDELRSFFQGFGDITYVKI---PPGKGCGFVQFVHRHAAEMAINQMQ 340
Query: 68 KRVFLEKEMKVNWASSPGN 86
++++W S N
Sbjct: 341 GYPIGNSRVRLSWGRSQNN 359
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 31/291 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E+ +LYVG+L+ +V+E L +FS IG V +V R+ YA++ F H
Sbjct: 34 ENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
A+ +N + ++ W+ + K+ + N IF+ +L P+I+ + L + F+ FG
Sbjct: 94 KAIDQLNYTPIKGRLCRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFG 150
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I + +I D + KSKG+ FV F ++ A+ AI A+NG L + I P
Sbjct: 151 DILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV-----APHLSR 204
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ER Q TK + TN +Y + +E ++F+ FG IV + K
Sbjct: 205 KERDSQLEETK----------AHYTN--LYVKNINSETTDEKFQEMFAQFGPIVSASLEK 252
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
+ KG+ FV + E A A+E+++ +D+NG K + G+ + N +
Sbjct: 253 DADGKLKGFGFVNYENHEDAVKAVEALNESDLNGE--KLYVGRAQKKNERM 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 18/261 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NL + + L FS G + K+ + + F+ F A A+ A+
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 67 NKRVFLEKEMKV--NWASSPGNQPKQDTSNHY-HIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +E+ V + + + ++T HY +++V +++ E + +E FA FG I
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGPIV 246
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D K KG+ FV++ +A A+ A+N L + + +K M +
Sbjct: 247 SASLEKDADG-KLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERMHVLK 305
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
K+ ++ + + ++ +++E + + F+P+GTI +V
Sbjct: 306 KQYEAY-------RLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRSEN 358
Query: 240 -KEKGYAFVKFTTKETATHAI 259
K KG+ FV F+T E AT AI
Sbjct: 359 GKSKGFGFVCFSTPEEATKAI 379
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND--PYAFLEFVHHTVAATALAA 65
T LYV N++ T+E +F+Q GP+ + ++ + F+ + +H A A+ A
Sbjct: 219 TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEA 278
Query: 66 MNKRVFLEKEMKVNWASSPGNQ-------------PKQDTSNHYHIFVGDLSPEIETQTL 112
+N+ +++ V A + K ++FV +L ++ + L
Sbjct: 279 LNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
+E FAP+G I++ +++R + KSKG+ FV F EA AIT N Q + + + +
Sbjct: 339 EEEFAPYGTITSAKVMRS-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 173 TRK 175
RK
Sbjct: 398 QRK 400
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
+LYVG LD +V+E +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 49 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + ++ W+ P + +IF+ +L I+ + L + FA FG + +
Sbjct: 109 QLNYSLIKGRACRIMWSQ---RDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLS 165
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C++ D Q +SKGY FV + AE AI A+NG L + + K ++
Sbjct: 166 CKVATDEQG-RSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISK-------KE 217
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD--IRVFKE- 241
RQ+ DE+ Q + +Y +++ E +++F FG + I+ +E
Sbjct: 218 RQSK------LDEIRAQFT----NIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEG 267
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F E A +A++ +H+T+ NG +
Sbjct: 268 NSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKL 300
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 18/283 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + L F+ G V CKV E G Y F+ + A TA+ A+
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAV 197
Query: 67 NKRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + S Q K D + +I+V +L PE+ + + F FG ++
Sbjct: 198 NGMLLNDKKVYVGHHISKKERQSKLDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVT 257
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ I D + SKG+ FV+F EA+NA+ ++ R + + + +K
Sbjct: 258 SAVIQTDEEG-NSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQKKA------- 309
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+R+ K+ ++ S +Y ++++E + F PFGTI +V ++
Sbjct: 310 EREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRDEK 369
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
KG+ FV F++ + AT A+ ++N I + + E
Sbjct: 370 GSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSLAQRRE 412
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATA 62
+Q T +YV NLD V+ E LF Q G V + E GN + F+ F H A A
Sbjct: 227 AQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNA 286
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-------------IFVGDLSPEIET 109
+ ++ + +++ V+ A + ++ ++ H +++ +L EI+
Sbjct: 287 VDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDD 346
Query: 110 QTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT 169
+ L+ F PFG I++ +++RD + SKG+ FV F EA A+ MN + +G++ +
Sbjct: 347 ERLRAEFEPFGTITSAKVMRDEKG-SSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYV 405
Query: 170 NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 406 SLAQRR------EVRRQQLESQIAQRNQIRMQQA 433
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 34/280 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+LYVG+LD VTE+ L FS GPV ++ R+ + YA++ F+ A AL
Sbjct: 148 ASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQRALD 207
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
MN V + +++ W+ + K N +F+ +L ++ + L E F+ FG+I +
Sbjct: 208 TMNFDVLRGRPLRLMWSQRDAHLRKSGVGN---VFIKNLDRSVDDKALFERFSAFGKILS 264
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG-QWLGSRSIRTNWSTRKPPAMTNER 183
++V D + S+GYAFV F +++ A+ AI MNG Q G R + +R+
Sbjct: 265 SKVVSDERG--SRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQA------- 315
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ ++ F +Y ++ FG +++ + VFS +G + ++V
Sbjct: 316 REAELRSRAGEFTNLYIKN-----------FGGRMDDARLRAVFSEYGKTLSVKVMTDAS 364
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +G+ FV F + E A A+E+++ ++G + F G+
Sbjct: 365 GRSRGFGFVSFESHEAARRAVEALNGRQVDGQPL--FVGR 402
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD SV ++ L FS G + KV+ E G+ YAF+ F + A A+ MN
Sbjct: 238 VFIKNLDRSVDDKALFERFSAFGKILSSKVVSDERGSRGYAFVHFQEQSAADRAIEHMNG 297
Query: 69 ------RVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
R+F+ + + + + ++++ + ++ L+ F+ +G+
Sbjct: 298 AQLRGCRLFVGRFQSRQAREA---ELRSRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKT 354
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +++ D +S+G+ FVSF A A+ A+NG+ + + + + RK
Sbjct: 355 LSVKVMTDASG-RSRGFGFVSFESHEAARRAVEALNGRQVDGQPLFVGRAQRKA------ 407
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE- 241
+RQ + + +Y ++E+ + + FS FG + +++ +E
Sbjct: 408 -ERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRLRREFSGFGAVSRVKIMREE 466
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ + F++ + A A+ ++NG +
Sbjct: 467 GRSKGFGLICFSSADEAARAL-----AEMNGRVL 495
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T LY+ N + + L A+FS+ G KV+ + + F+ F H A A+ A
Sbjct: 328 TNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGFVSFESHEAARRAVEA 387
Query: 66 MNKR------VFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
+N R +F+ E++ ++ A Q + ++V +L ++ L
Sbjct: 388 LNGRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRL 447
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ F+ FG +S +I+R+ +SKG+ + F EA A+ MNG+ LGS+ +
Sbjct: 448 RREFSGFGAVSRVKIMREEG--RSKGFGLICFSSADEAARALAEMNGRVLGSKPL 500
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATA 62
+Q LYV NLD +V E+ L FS G V K++RE G + + F AA A
Sbjct: 427 RAQGAKLYVKNLDDAVDEDRLRREFSGFGAVSRVKIMREEGRSKGFGLICFSSADEAARA 486
Query: 63 LAAMNKRVFLEKEMKVNWASS 83
LA MN RV K + + A S
Sbjct: 487 LAEMNGRVLGSKPLSIALAQS 507
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 29/282 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L +TE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + + +++ W+ + K N +F+ +L I+ + + + F+ FG I +C
Sbjct: 63 MNFDLIKGRPIRIMWSQRDPSLRKSGVGN---VFIKNLDKNIDNKAMYDTFSAFGNILSC 119
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV F + A +I +NG L + + + R P E++
Sbjct: 120 KVAQDEKG-NSKGYGFVHFETEESANTSIEKVNGMLLNGKKV---YVGRFIPRKEREKE- 174
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF----KE 241
+ + VY FG +LN+E + ++F +GTI RV K
Sbjct: 175 -------------LGEKAKLFTNVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKDGKS 221
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
+G+ FV F E+A HA++ ++ ++ G + G+ + N
Sbjct: 222 RGFGFVAFENPESAEHAVQELNGKEL-GEGKILYVGRAQKKN 262
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD ++ + + FS G + CKV + E GN Y F+ F A T++ +N
Sbjct: 92 VFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVN 151
Query: 68 KRVFLEKEMKVNWASSPGNQPK---QDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ K++ V + K + +++V + E+ +TLKE F +G I++
Sbjct: 152 GMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLKEMFEKYGTITS 211
Query: 125 CRI-VRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
R+ ++D KS+G+ FV+F AE+A+ +NG+ LG I +K E
Sbjct: 212 HRVMIKDG---KSRGFGFVAFENPESAEHAVQELNGKELGEGKILYVGRAQKKNERQMEL 268
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
KR+ K + +Y +++E + K FSPFGTI +V E
Sbjct: 269 KRRFEQLKMERL------TRYQGVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLEEG 322
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F+ E AT A+ T++NG V
Sbjct: 323 RSKGFGFVCFSAAEEATKAV-----TEMNGRIV 350
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDPYAFLEFVHHTVAATALAAM 66
T +YV N + +E L +F + G + +V I++ + + F+ F + A A+ +
Sbjct: 183 TNVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKDGKSRGFGFVAFENPESAEHAVQEL 242
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQTL 112
N + E ++ + N+ + + + +++V +L I+ + L
Sbjct: 243 NGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ + +
Sbjct: 303 RKEFSPFGTITSAKVMLEEG--RSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 173 TRK 175
RK
Sbjct: 361 QRK 363
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD S+ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 284 QGVNLYVKNLDDSIDDERLRKEFSPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVT 343
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
MN R+ K + V A Q K+D H + Q + + F P G
Sbjct: 344 EMNGRIVGSKPLYVALA-----QRKEDRKAHLASQYMQRMANMRMQHMGQIFQPGG 394
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F P + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGP---ALSVKVMTDES 224
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 225 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 258
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 26/272 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F P +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGP---ALSV 217
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 218 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 277 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 328
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 329 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 355
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 289 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 348
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 349 EMNGRIVATKPLYVALA 365
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 5/168 (2%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A AL +
Sbjct: 2 VLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F +
Sbjct: 62 NGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPSYLSGH 118
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
++ D QT S+GY FVSF + +A+NA+ +M GQ L R +R NW+ +
Sbjct: 119 VMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 166
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 61
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + + SS ++ G +
Sbjct: 62 NGKQIENNIVKINWAFQSQQS-----------------------SSDDTFNLFVGDLNVN 98
Query: 218 LNEELVSKVFSPF-----GTIV-DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F G ++ D++ +GY FV FT+++ A +A++S+ D+NG
Sbjct: 99 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 158
Query: 272 VKCFW 276
++ W
Sbjct: 159 LRINW 163
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKG-----YAFVKFTTKETATHAIESI 262
+Y G K + E+++ + F G I +I++ +K YAFV++ A A++++
Sbjct: 2 VLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 263 HNTDINGHTVKCFWGKESENNST 285
+ I + VK W +S+ +S+
Sbjct: 62 NGKQIENNIVKINWAFQSQQSSS 84
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F P + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGP---ALSVKVMTDES 224
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 225 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 258
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 26/272 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F P +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGP---ALSV 217
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 218 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 277 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 328
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 329 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 355
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 289 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 348
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 349 EMNGRIVATKPLYVALA 365
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F P + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGP---ALSVKVMTDES 224
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 225 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 258
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 26/272 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F P +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGP---ALSV 217
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 218 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 277 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 328
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 329 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 355
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 289 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 348
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 349 EMNGRIVATKPLYVALA 365
>gi|90078618|dbj|BAE88989.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIES 261
SSP NCTVYCGG L ++L+ + FSPFG I++IRVF EKGY+FV+F+T E+A HAI S
Sbjct: 2 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 61
Query: 262 IHNTDINGHTVKCFWGKES 280
++ T I GH VKC+WGKES
Sbjct: 62 VNGTTIEGHVVKCYWGKES 80
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++ G ++ + Q +++ F+PFG+I R+ KGY+FV F A +AI ++
Sbjct: 9 VYCGGIASGLTDQLMRQTFSPFGQIMEIRV------FPEKGYSFVRFSTHESAAHAIVSV 62
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYN 200
NG + ++ W P N +Q +++ + +VY
Sbjct: 63 NGTTIEGHVVKCYWGKESPDMTKN--FQQVDYSQWGQWSQVYG 103
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNK 68
T+Y G + +T++L+ FS G + +V E G Y+F+ F H AA A+ ++N
Sbjct: 8 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKG---YSFVRFSTHESAAHAIVSVNG 64
Query: 69 RVFLEKEMKVNWA 81
+K W
Sbjct: 65 TTIEGHVVKCYWG 77
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ YA++ F H A LA
Sbjct: 46 SLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLAT 105
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V +++ W+ Q K+ N +FV +L I+ + L + F+ FG I +C
Sbjct: 106 MNLDVIKGNPIRIMWSQRDPGQRKRGVGN---VFVKNLEKSIDNKALYDTFSTFGRILSC 162
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D SKGY FV F + A AI MNG L + + + R+R
Sbjct: 163 KVISDENG--SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFVGR-------FKSRRER 213
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
++ + +Y FG++++++ ++++F+ +G + ++V +
Sbjct: 214 ESE----------LGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGR 263
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F + E A A++ ++ +NG +
Sbjct: 264 SKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQI 295
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 31/276 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NL+ S+ + L FS G + CKVI E G+ Y F+ F A A+ MN
Sbjct: 135 VFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGSKGYGFVHFETQESAGKAIEKMNG 194
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++ V S + + ++ +I++ + ++ Q L E FA +G +
Sbjct: 195 MLLNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSV 254
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN---- 181
+++ D +SKG+ FVSF +A+ A+ MNG+ L + I + +K T
Sbjct: 255 KVMTD-DCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTELKRH 313
Query: 182 -ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
E+ +QN H + +Y +N+E + K FSPFGTI +V
Sbjct: 314 FEQIKQNQHIRY------------QGVNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMM 361
Query: 241 E----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
E KG+ FV F++ + A A + ++NG V
Sbjct: 362 ENGRSKGFGFVCFSSSKDAAKA-----SREMNGKLV 392
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ L E F+P G I + R+ RD T S GYA+V+F +A AE + M
Sbjct: 47 LYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLATM 106
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + IR WS R P +RKR + V+ K
Sbjct: 107 NLDVIKGNPIRIMWSQRDP----GQRKRGVGN-------------------VFVKNLEKS 143
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
++ + + FS FG I+ +V + KGY FV F T+E+A AIE ++ +N +K
Sbjct: 144 IDNKALYDTFSTFGRILSCKVISDENGSKGYGFVHFETQESAGKAIEKMNGMLLN--NLK 201
Query: 274 CFWGK 278
F G+
Sbjct: 202 VFVGR 206
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N ++ ++ L +F++ GP KV+ + + + F+ F H A A+
Sbjct: 225 TNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSKGFGFVSFQSHEDAQAAVDD 284
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQ+ Y ++++ +L I + L
Sbjct: 285 MNGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEHL 344
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F +A A MNG+ + S+ + + +
Sbjct: 345 RKEFSPFGTITSAKVMME--NGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLA 402
Query: 173 TRKPPA---MTNERKRQNSHTKTITFDEVYNQSSPTNCTVY 210
RK + N+ + +H ++I+ + V+N N + Y
Sbjct: 403 QRKEERRMHLKNQYMYRLAHLRSIS-NPVFNPYQLANSSPY 442
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F AA A
Sbjct: 326 QGVNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMMENGRSKGFGFVCFSSSKDAAKASR 385
Query: 65 AMNKRVFLEKEMKVNWA 81
MN ++ K + V+ A
Sbjct: 386 EMNGKLVASKPLYVSLA 402
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E T LYVGNL SV L LF G + +V+ + + Y F+++ A+
Sbjct: 292 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 351
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN-----QPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ MN R+ + ++V A P + QP ++T + ++V +LS + T L
Sbjct: 352 EAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET-DMAKLYVCNLSLSMNTDRLIHL 410
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT------ 169
F PFGE++N ++ +D T SKGY FV + A A+ +NG+ + R I
Sbjct: 411 FLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIP 470
Query: 170 ----NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
N + P N S T+T+ ++ N +Y ++ + + +
Sbjct: 471 STLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSN--------LYVCNMPSSIDTKKLVE 522
Query: 226 VFSPFGTIVDIRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+F PFG I RV F KGY F+KFT E+AT AI +++ + G +
Sbjct: 523 LFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 575
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 48/294 (16%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
E+ LYV NL +S+ + L LF G V KV ++ + Y F+++ AA
Sbjct: 387 ETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAA 446
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQ-------------------------DTSNH 95
A+ +N R+ ++++V + P P D SN
Sbjct: 447 EAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSN- 505
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
++V ++ I+T+ L E F PFG+I++ R+V DP T +KGY F+ F A AI
Sbjct: 506 --LYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 563
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
AMNG +G I + P A + + T+ I +Y + P + T
Sbjct: 564 AMNGALVGGEMIIVRVAGLSPSASISAVQT----TQDINKSRLYITNLPRSMTA------ 613
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+++V+ +F+PFG I +V Y+ V + +AT A++ + + G
Sbjct: 614 ----DKMVN-LFAPFGQIT--KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEG 660
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 32/275 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
E + LYV N+ S+ + L LF G + +V+ +P Y F++F A
Sbjct: 500 EIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESAT 559
Query: 61 TALAAMNKRVFLEKEMKVNWA------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+AAMN + + + V A S Q QD N +++ +L + +
Sbjct: 560 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDI-NKSRLYITNLPRSMTADKMVN 618
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
FAPFG+I+ + L + Y+ V + A A+ M+G + + + R
Sbjct: 619 LFAPFGQIT--------KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEGKRLVVK---R 667
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
TN + K I +Y P++ L E+ +F PFG +V
Sbjct: 668 SELCTTNASQAGGKPIKEIDMANLYVGRVPSS-----------LTEDQFIDLFRPFGRVV 716
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
R+F+ + Y V+F A AI+ + I G
Sbjct: 717 QARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGG 751
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
L K+ + S P + K ++ +++VG+L + + L E F PFG+I R+V D
Sbjct: 272 LHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC 331
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
T S+GY FV + A AI MNG+ + R++ + P+ + ++ + T
Sbjct: 332 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGF--PSSEDNSQQPSKETD 389
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYA 245
+Y +N + + +F PFG + + +V K+ KGY
Sbjct: 390 M--------------AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYG 435
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVK 273
FV++++ A A+ ++ ++G ++
Sbjct: 436 FVQYSSPHHAAEAVIHLNGRLVDGRKIE 463
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+ LY+ NL S+T + + LF+ G + KV+ N Y+ + + A A+ M+
Sbjct: 600 SRLYITNLPRSMTADKMVNLFAPFGQI--TKVLM---NLEYSLVWYADAPSATKAVQHMD 654
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
KR+ +++ E+ AS G +P ++ + +++VG + + + F PFG
Sbjct: 655 GYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-DMANLYVGRVPSSLTEDQFIDLFRPFG 713
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R+ R + Y V F + A AI ++G +G + + PA +
Sbjct: 714 RVVQARMFR------FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGL--PAES 765
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
N K + T ++ +E Q TN +Y +N E + +F P G I +V
Sbjct: 766 NAAK--GALTSQMSSNE-QGQIDMTN--LYVSHLPSYVNNERLIDLFLPCGQITQAKVVV 820
Query: 241 E------KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
E KG+ FVKF +A A+ ++ ++GH ++
Sbjct: 821 ERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 859
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG + S+TE+ LF G V ++ R Y + F + + AA A+ ++
Sbjct: 691 LYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQRYGMVRFDNPSCAAAAIDHLDGY 747
Query: 70 VFLEKEMKVNWASSP-------GNQPKQDTSNH------YHIFVGDLSPEIETQTLKEAF 116
+ V A P G Q +SN +++V L + + L + F
Sbjct: 748 QIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLF 807
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
P G+I+ ++V + T SKG+ FV F A A+T MNG L + + P
Sbjct: 808 LPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 867
Query: 177 PAMTNERKRQNSH 189
AM++ SH
Sbjct: 868 DAMSSYMAHFYSH 880
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 19/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALAA 65
T++VG+L + E L F+ G + KVIR ++ Y F+EF H A L
Sbjct: 79 TVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQN 138
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEI 122
+ E+ ++NWA+ + D IFVGDL+ ++ L E F+ + +
Sbjct: 139 YAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSV 198
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST-RKPPAMTN 181
++V D T +SKGY FV F E A+T MNG + SR +R +T RK
Sbjct: 199 KAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGY-- 256
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+Q S + I+ +++ TN T++ GG ++ E + + FS +G IV +++
Sbjct: 257 ---QQGSQSNGISSQ---SEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVG 310
Query: 242 KGYAFVKFTTK----ETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG F ++ + A A++ ++ T I V+ WG+ N
Sbjct: 311 KGCGFTICNSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNPAN 355
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 32/262 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAAM 66
LYVG+L V EE L FS+IG V +V R+ Y ++ + A AL +
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + L+K ++V W++ + + N IFV +L+ ++ +L+E F+ FG++ +C+
Sbjct: 104 NHSLVLDKPIRVMWSNRDPDARRSGVGN---IFVKNLNNSVDNASLQELFSKFGDVLSCK 160
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ ++ + S+GY FV F + A+ AI +NG R + +K +ER
Sbjct: 161 VAKN-EDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATFIKK-----SERSAN 214
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
N T +Y D+ EELV FS FG IV +++ +
Sbjct: 215 NDDKFT---------------NLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSS 259
Query: 242 KGYAFVKFTTKETATHAIESIH 263
G+ FV F E+A A E++H
Sbjct: 260 LGFGFVSFQNPESAIKAQETMH 281
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ + L +AF+ G +++ R+ RD T +S Y +V++ +A+A A+ +
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + IR WS R P A +S N ++
Sbjct: 104 NHSLVLDKPIRVMWSNRDPDA---------------------RRSGVGN--IFVKNLNNS 140
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + ++FS FG ++ +V K +GY FV+F ++E+A AI +++ + N +
Sbjct: 141 VDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKL 200
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAA 60
++ + T LY+ +LD +TEEL+ FSQ GP+ K++R P + F+ F + A
Sbjct: 215 NDDKFTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAI 274
Query: 61 TALAAMNKRVFLEKEMKVNWASSPG---------NQPKQD----TSNHYHIFVGDLSPEI 107
A M+ + K + V A ++ K++ SN ++++ ++ E+
Sbjct: 275 KAQETMHGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDEV 334
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ L+ FA +G I++ +++RD + + S+G+ FV + EA++ + +M G + +
Sbjct: 335 DDDALRARFAEYGNITSAKVMRDDKGI-SRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPL 393
Query: 168 RTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCG 212
RK R + H F ++ PTN + G
Sbjct: 394 YVAIFQRK----EERRAKLQQH-----FAQLARMVGPTNSMIPTG 429
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 35/279 (12%)
Query: 5 SQPT-TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
S PT +LYVG+L VTE +L FS+ GP+ +V R+ + YA++ F H A
Sbjct: 7 SYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAE 66
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
AL MN V K +++ W+ P S +IFV +L I + L + + FG
Sbjct: 67 HALDTMNFDVIKGKPLRIMWSQ---RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS-RSIRTNWSTRKPPAM 179
+ +C++V D SKGY FV F + AE AI MNG L + + +RK
Sbjct: 124 NVLSCKVVCDENG--SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRK---- 177
Query: 180 TNERKRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV 238
ER+ + + K VY FG+D+++E + +F FG + ++V
Sbjct: 178 --EREAELGARAKEFP-------------NVYIKNFGEDMDDERLKDLFGKFGPTLSVKV 222
Query: 239 F-----KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 223 MTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQI 261
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 39/280 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
++V NLD S+ + L S G V CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREAAERAIEKMNG 160
Query: 69 ------RVFL-----EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
+VF+ KE + + P ++++ + +++ + LK+ F
Sbjct: 161 IPLNDCKVFVGRFKSRKEREAELGARAKEFP--------NVYIKNFGEDMDDERLKDLFG 212
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPP 177
FG + +++ D Q+ KSKG+ FVSF K +A+ A+ MNG+ L + I + +K
Sbjct: 213 KFGPTLSVKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 178 AMTN-ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
T +RK + IT +V N +Y +++E + K FSPFGTI
Sbjct: 272 RQTELKRKFEQMKQDRITRYQVVN--------LYVKNLDDAIDDERLRKAFSPFGTITSA 323
Query: 237 RVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+V E KG+ FV F++ E AT A+ T++NG V
Sbjct: 324 KVMMEGGRSKGFGFVCFSSPEEATKAV-----TEMNGRIV 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL P++ L E F+ G I + R+ RD T +S YA+V+F +AE+A+ M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHALDTM 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + +R WS R P ++ V N ++ K
Sbjct: 73 NFDVIKGKPLRIMWSQRDP---------------SLRKSGVGN--------IFVKNLDKS 109
Query: 218 LNEELVSKVFSPFGTIVDIRVFKE----KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
+N + + S FG ++ +V + KGY FV F T+E A AIE ++ +N K
Sbjct: 110 INNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREAAERAIEKMNGIPLN--DCK 167
Query: 274 CFWGKESENNSTLAQPSAPTTPQPNSTAPQFPYIYNQQMG 313
F G+ A+ A A +FP +Y + G
Sbjct: 168 VFVGRFKSRKEREAELGA--------RAKEFPNVYIKNFG 199
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+Y+ N + +E L LF + GP KV+ + + F+ F H A A+ MN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 68 KRVFLEKEMKVNWASSPGN----------QPKQDTSNHYHI---FVGDLSPEIETQTLKE 114
+ K++ V A Q KQD Y + +V +L I+ + L++
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLRK 312
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
AF+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + + + + R
Sbjct: 313 AFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALAQR 370
Query: 175 K 175
K
Sbjct: 371 K 371
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 292 QVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ + + V A
Sbjct: 352 EMNGRIVATEPLYVALA 368
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 32/310 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TTL++G L+ + E + +++ +G K+IR+ GN Y F++F AA AL
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 66 MNKRVF--LEKEMKVNWASSPGNQPKQ-----DTSNHYHIFVGDLSPEIETQTLKEAFA- 117
+N ++ + K+NWAS G ++ + + IFVGDL PE+ L + F
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-- 175
+ + +I+ DP + S+GY FV F + + + A+T M G + G+R +R + +T K
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNK 242
Query: 176 -----------------PPAMTNERKRQNSHTKTITFDEVYNQ-SSPTNCTVYCGGFGKD 217
P M + NQ + P N TV+ GG
Sbjct: 243 SGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGY 302
Query: 218 LNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG 277
+ E+ + F FG I +++ KG FV+F + A AI + I V+ WG
Sbjct: 303 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 362
Query: 278 KESENNSTLA 287
+ S+NNS A
Sbjct: 363 R-SQNNSGPA 371
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 57 SLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 116
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + +IF+ +L +I+ + L + FA FG + +C
Sbjct: 117 LNYSLIKNRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLSC 173
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + +S+G+ FV + A+ AI A+NG L + + K K
Sbjct: 174 KVATD-ENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISK--------KE 224
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ +H DE +Q + +Y ++ ++ + +F+ FG + V K+
Sbjct: 225 RQAH-----IDEQKSQFT----NLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGK 275
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F E+A A++++H+T++NG +
Sbjct: 276 SKGFGFVNFKDHESAQAAVDALHDTELNGKKL 307
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAA---TALAAM 66
+++ NLD + + L F+ G V CKV + F FVH+ A TA+ A+
Sbjct: 146 IFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDENGRSRGF-GFVHYDTAEAADTAIKAV 204
Query: 67 NKRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V ++ S Q D S +++V +L E+ + FA FGE++
Sbjct: 205 NGMLLNDKKVFVGHYISKKERQAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVT 264
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + +D + KSKG+ FV+F A+ A+ A++ L + + + +K
Sbjct: 265 SAVVQKDEEG-KSKGFGFVNFKDHESAQAAVDALHDTELNGKKLFVTRAQKK-------A 316
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+R+ K+ ++ S +Y D++++ + F PFGTI ++ ++
Sbjct: 317 EREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRDEK 376
Query: 242 ---KGYAFVKFTTKETATHAIESIHN 264
KG+ FV +++ E AT A+ ++N
Sbjct: 377 GTSKGFGFVCYSSPEEATKAVAEMNN 402
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 32/203 (15%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAAT 61
+SQ T LYV NLD VT++ +F++ G V V + E + + F+ F H A
Sbjct: 233 KSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQA 292
Query: 62 ALAAMN------KRVFL---------EKEMKVNWASSPGNQPKQDTSNHY---HIFVGDL 103
A+ A++ K++F+ E+E++ ++ Q K + + Y ++++ +L
Sbjct: 293 AVDALHDTELNGKKLFVTRAQKKAEREEELRKSY-----EQAKMEKLSKYQGANLYIKNL 347
Query: 104 SPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLG 163
+++ L+ F PFG I++C+I+RD + SKG+ FV + EA A+ MN + LG
Sbjct: 348 EDDMDDDKLRAEFEPFGTITSCKIMRD-EKGTSKGFGFVCYSSPEEATKAVAEMNNKMLG 406
Query: 164 SRSIRTNWSTRKPPAMTNERKRQ 186
S+ + + PA E +RQ
Sbjct: 407 SKPLYVS------PAQRREVRRQ 423
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GN-DPYAFLEFVHHTVA 59
+ +Q TLY+GNLD V ++LL LF Q GPV+ V R+ GN Y F+EF + A
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
AL MN K +++N ++ Q +++ ++F+G+L P+++ +T+ + F+ F
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSA----QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
G I + +I+RDP+T S+G+ FVSF ++ A+ AMNGQ++ +R I +++ +K
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKK 195
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GN-DPYAFLEFVHHTVA 59
+ +Q TLY+GNLD V ++LL LF Q GPV+ V R+ GN Y F+EF + A
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
AL MN K +++N ++ Q +++ ++F+G+L P+++ +T+ + F+ F
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSA----QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
G I + +I+RDP+T S+G+ FVSF ++ A+ AMNGQ++ +R I +++ +K
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKK 195
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GN-DPYAFLEFVHHTVA 59
+ +Q TLY+GNLD V ++LL LF Q GPV+ V R+ GN Y F+EF + A
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPF 119
AL MN K +++N ++ Q +++ ++F+G+L P+++ +T+ + F+ F
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSA----QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 120 GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
G I + +I+RDP+T S+G+ FVSF ++ A+ AMNGQ++ +R I +++ +K
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKK 195
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + K T VY FG+D+++E + +F P + ++V
Sbjct: 181 AELGARAKEFT-------------NVYIKNFGEDMDDERLKDLFGP---ALSVKVMTDES 224
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 225 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 258
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 26/272 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + +++ + LK+ F P +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGP---ALSV 217
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN-ERK 184
+++ D ++ KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T +RK
Sbjct: 218 KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 276
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
+ IT + N +Y +++E + K FSPFGTI +V E
Sbjct: 277 FEQMKQDRITRYQGVN--------LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR 328
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 329 SKGFGFVCFSSPEEATKAV-----TEMNGRIV 355
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF GP KV+ + + F+ F H A A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 247
Query: 66 MNKRVFLEKEMKVNWA----------SSPGNQPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K++ V A Q KQD Y +++V +L I+ + L
Sbjct: 248 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 307
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ + ++ + +
Sbjct: 308 RKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 173 TRK 175
RK
Sbjct: 366 QRK 368
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 200 NQSSPT--NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTT 251
N S+P+ ++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 252 KETATHAIESIHNTDINGHTVKCFWGKES 280
A A+++++ I G V+ W +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRD 90
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A+
Sbjct: 289 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 348
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 349 EMNGRIVATKPLYVALA 365
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFS IG V +V R+ YA++ + + AL
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + K ++ W+ P + ++F+ +L I+ + L + FA FG I +C
Sbjct: 112 LNYTLIKGKPCRIMWSQ---RDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSC 168
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV + A NAI +NG L + + K + R
Sbjct: 169 KVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK-------KDR 220
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q+ FDE+ +++ TN +Y D+ EE K+F FG I + ++
Sbjct: 221 QSK------FDEM--KANFTN--IYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGK 270
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+G+ FV ++T E+A A++ +H+ ++ T K + G+
Sbjct: 271 SRGFGFVNYSTHESAQAAVDEMHDKEV--KTQKLYVGR 306
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 13/237 (5%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD ++ + L F+ G + CKV ++ GN Y F+ + A A+ +N
Sbjct: 141 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 200
Query: 68 KRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ +K++ V + S Q K D +N +I++ ++ P++ + ++ F FGEI++
Sbjct: 201 GMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITS 260
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+ RDP+ KS+G+ FV++ A+ A+ M+ + + ++ + + +K +
Sbjct: 261 ATLSRDPEG-KSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKK-------HE 312
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
R+ K + S +Y D+++E + ++F P+GTI +V ++
Sbjct: 313 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 369
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 81 ASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYA 140
+SSP + + + ++VG+L P + L E F+ G++++ R+ RD T +S GYA
Sbjct: 36 SSSPTSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYA 95
Query: 141 FVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYN 200
+V++ A+ E A+ +N + + R WS R P + KT
Sbjct: 96 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP-----------ALRKT-------- 136
Query: 201 QSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETA 255
V+ ++ + + F+ FG I+ +V ++ KGY FV + T E A
Sbjct: 137 ----GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAA 192
Query: 256 THAIESIHNTDINGHTV 272
+AI+ ++ +N V
Sbjct: 193 NNAIKHVNGMLLNDKKV 209
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 67/235 (28%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N+D VTEE +F Q G + + R+P + F+ + H A A+
Sbjct: 232 TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDE 291
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQ----------DTSNHY---HIFVGDLSPEIETQTL 112
M+ + +++ V A + ++ + ++ Y +++V +L+ +++ + L
Sbjct: 292 MHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 351
Query: 113 KEAFAPFGEISNCRIVRD---------PQTLK---------------------------- 135
+E F P+G I++ +++RD P + K
Sbjct: 352 RELFGPYGTITSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEEKPKESDEE 411
Query: 136 ---------------SKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
SKG+ FV F EA A+T MN + + + + + RK
Sbjct: 412 KKDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRK 466
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L+ I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKG+ FV F + AE AI MNG L R + + ++K ER+
Sbjct: 129 KVVSDENG--SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + TK T VY FG +++E ++ +F FG I+ ++V
Sbjct: 181 AELGTGTKEFT-------------NVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEG 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST 285
K KG+ FV F E A A++ ++ ++NG + ++ ++ T
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHT 274
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NL+ ++ + L FS G + CKV+ E G+ + F+ F A A+ MN
Sbjct: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + T ++++ + ++ +TL F FG+I +
Sbjct: 161 MLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF + +A+ A+ MNG+ L + I + +K T + +
Sbjct: 221 KVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHK 279
Query: 186 --QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
Q + K+I + + +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQVTQDKSIRYQGI---------NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ +++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----SEMNGRIV 358
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FS G I+ IRV+++ GYA V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A++
Sbjct: 292 QGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVS 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAA 65
+LY+G+L V+E +L FS GPV +V R+ + YA++ F A AL
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V + M++ W+ P + + +IF+ +L I+ +++ + F+ FG I +C
Sbjct: 118 MNFEVIHGRPMRIMWSQ---RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + SKGY FV F + A+ AI +NG L + + + M
Sbjct: 175 KVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKE---- 229
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+S V+ FG+ L++E +S +FS FG I V K
Sbjct: 230 -------------LGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK 276
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVK---CFWGKESENNSTL 286
KG+ FV F ++ A A+E ++++ + G K C K+SE ++ L
Sbjct: 277 PKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 30/196 (15%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P T + +++GDL P++ L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A+AE A+ MN + + R +R WS R P A R+ N + D V + N
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAA----RRAGNGNIFIKNLDRVID-----NK 159
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESI 262
+VY FS FG I+ +V + KGY FV F T+ +A AIE +
Sbjct: 160 SVY--------------DTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 263 HNTDINGHTVKCFWGK 278
+ ++ K + GK
Sbjct: 206 NGMLLSDK--KVYVGK 219
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 18/285 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD + + + FS G + CKV + GN Y F+ F A TA+ +
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + K+ + ++FV + ++ + L F+ FGEI+
Sbjct: 206 NGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEIT 265
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWL-GSRSIRTNWSTRKPPAMTNE 182
+ ++ D Q K KG+ FV+F + A A+ +N L G+ + +K + E
Sbjct: 266 SAVVMTDAQG-KPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAE 324
Query: 183 RKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF--- 239
KR+ K +Y +DLN++ + FS FGTI +V
Sbjct: 325 LKRKYEALKQERVQRY------QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE 378
Query: 240 --KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
+ KG+ FV F E AT A+ +++ I + + E+
Sbjct: 379 NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKED 423
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T ++V N + +E L A+FS+ G + V+ + P + F+ F A A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 66 MNKRVFLEKEMKVNWASSPGNQP------------KQDTSNHY---HIFVGDLSPEIETQ 110
+N + + K++ + KQ+ Y +++V ++ ++
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
L++ F+ FG I++ +++ D + +SKG+ FV F K EA A+T MN + +G++ +
Sbjct: 358 GLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVA 416
Query: 171 WSTRK 175
+ RK
Sbjct: 417 LAQRK 421
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 29/288 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ P S +IF+ +L I+ + + + F+ FG I +C
Sbjct: 79 MNFDMMYGKPIRIMWSQ---RDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSC 135
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D ++ SKGY FV F + A+ AI +NG L + + + + P
Sbjct: 136 KVANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKV---YVGKFQP-------- 183
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+T E+ +++ VY F +L++E + K+FS FG I V K
Sbjct: 184 -----RTARLREM-GETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGK 237
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
KG+ FV F E A A+ +H ++ G K + + + N A+
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAE 285
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G + V+ + + F+ F + A A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 66 MN--------KRVFLEKEMKVNWASSPGN----QPKQDTSNHY---HIFVGDLSPEIETQ 110
M+ +++++ + K N S+ Q K + Y +++V +L +
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
LK+ F +G+I++ +++ D +SKG+ FV F K EA A+T MNG+ + ++ +
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVA 377
Query: 171 WSTRK 175
+ RK
Sbjct: 378 LAQRK 382
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 29/271 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ + AL +
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + + ++ W+ P + +IF+ +L +I+ + L + FA FG + +C+
Sbjct: 106 NYSLIKNRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 162
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ D + +SKGY FV + AE AI A+NG L + + + + ++RQ
Sbjct: 163 VATD-EHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISR-------KERQ 214
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD--IRVFKE--- 241
+ DE+ Q + +Y + ++ ++F +G + ++V +E
Sbjct: 215 SK------LDEMKAQFT----NLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNS 264
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV + E A A++++H+TDI G +
Sbjct: 265 KGFGFVNYEHHEEAQSAVDALHDTDIRGKKL 295
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAAT 61
++Q T LY+ NLD SVT++ +F + G V V + E GN + F+ + HH A +
Sbjct: 221 KAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQS 280
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ A++ K++F+ E+E ++ + K ++++ +L +++
Sbjct: 281 AVDALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVD 340
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
+ L+ F PFG I++C+++RD ++ SKG+ FV F EA A+ MN + +GS+ +
Sbjct: 341 DEKLRAEFEPFGTITSCKVMRDDKST-SKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLY 399
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 400 VSLAQRR------EVRRQQLESQIAQRNQIRMQQA 428
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 56/419 (13%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD + + L F+ G V CKV E G Y F+ + A TA+ A+N
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAVN 193
Query: 68 KRVFLEKEMKVNW-ASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+ +K++ V + S Q K D + ++++ +L + +E F +G +++
Sbjct: 194 GMLLNDKKVYVGYHISRKERQSKLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTS 253
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
IV+ + SKG+ FV++ EA++A+ A++ + + + + + +K +
Sbjct: 254 A-IVQVDEEGNSKGFGFVNYEHHEEAQSAVDALHDTDIRGKKLFVSRAQKK-------AE 305
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
R+ ++ ++ S +Y D+++E + F PFGTI +V ++
Sbjct: 306 REEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKS 365
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE-------------NNSTL 286
KG+ FV F++ + AT A+ ++N I + + E N +
Sbjct: 366 TSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQRREVRRQQLESQIAQRNQIRM 425
Query: 287 AQPSAPTTPQPNSTAP--------QFPYIYNQQMGY----WYPQAAAYTATAAQLP--QQ 332
Q +A P P FP MGY P Y A Q+P
Sbjct: 426 QQAAAAGIPGGYINGPMYYPPGPGSFPPQGRNMMGYGQPGMLPPRPRYPAGNGQVPGGMP 485
Query: 333 FYQYGQLGYPQGYVGMVGR------QVPGWQGIPGAQPTAQQMAV--AQAQPSMMAAYA 383
YGQ PQ Y GM G + P +G PG+ PT + A A PS+ A A
Sbjct: 486 IPPYGQP--PQSYGGMPGYPRGGAPRPPVARG-PGSSPTNPNAPIPRANAPPSVNGAAA 541
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 13/288 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALA 64
T L++G L+ V E + ++ +G K+IR+ N Y F++F T AA+
Sbjct: 67 TALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDF-SSTAAASKAL 125
Query: 65 AMNKRVF--LEKEMKVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
++N + + K+NWAS G K D + IFVGDL PE+ L F + +
Sbjct: 126 SLNGTIIPGTTRLFKLNWASGGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYP 185
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-PPAM 179
+ +I+ D + S+GY FV F + + A+T M G + GSR IR + +T K P M
Sbjct: 186 SCKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALTEMQGVYCGSRPIRISTATPKNKPGM 245
Query: 180 TNERKRQNSHTKTITFD--EVYNQ-SSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDI 236
++ + + + NQ + P N TV+ GG + E+ + F FG I +
Sbjct: 246 SHINMMHMGMSPLGYYGAPQPMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYV 305
Query: 237 RVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNS 284
++ KG FV+F + A AI + I V+ WG+ S+NNS
Sbjct: 306 KIPPGKGCGFVQFVQRHAAEMAISQMQGYPIGNSRVRLSWGR-SQNNS 352
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 37/199 (18%)
Query: 3 DESQPT-TLYVGNLDVSVTEELLCALFSQIGP-VKGCKVIRE---PGNDPYAFLEFVHHT 57
D+ +P +++VG+L V E LL +LF P K K++ + + Y F+ F
Sbjct: 154 DDREPEFSIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYGFVRFSDEV 213
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-------------------- 97
AL M + ++++ A +P N+P N H
Sbjct: 214 DQRRALTEMQGVYCGSRPIRISTA-TPKNKPGMSHINMMHMGMSPLGYYGAPQPMNQFTD 272
Query: 98 -----IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAEN 152
+FVG LS + L+ F FGEI+ +I KG FV FV++ AE
Sbjct: 273 PNNTTVFVGGLSSFVTEDELRSFFQGFGEITYVKIP------PGKGCGFVQFVQRHAAEM 326
Query: 153 AITAMNGQWLGSRSIRTNW 171
AI+ M G +G+ +R +W
Sbjct: 327 AISQMQGYPIGNSRVRLSW 345
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 84 PGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
P +Q N +++G+L P ++ +++ + GE N +++RD + + GY FV
Sbjct: 55 PSSQSPLQGENKTALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVD 114
Query: 144 FVKKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQ 201
F A A A+ ++NG + +R + NW++ +T+ + +
Sbjct: 115 FSSTAAASKAL-SLNGTIIPGTTRLFKLNWASGG--GLTDRKDDREPE------------ 159
Query: 202 SSPTNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTKET 254
+++ G G ++NE L+ +F + D+ +GY FV+F+ +
Sbjct: 160 -----FSIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYGFVRFSDEVD 214
Query: 255 ATHAI 259
A+
Sbjct: 215 QRRAL 219
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 32/257 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAAM 66
LYVG+L V EE L FS+IG V +V R+ Y ++ + A AL +
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + L+K ++V W++ P S +IFV +LS ++ +L+E F+ FG++ +C+
Sbjct: 183 NHSLVLDKPIRVMWSN---RDPDARRSGVGNIFVKNLSSSVDNASLQELFSKFGDVLSCK 239
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ ++ + S+GY FV F + A+ AI +NG R + +K +ER
Sbjct: 240 VAKN-EDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVATFIKK-----SERSAN 293
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK---- 242
N T +Y D+ EELV FS FG+IV +++ K
Sbjct: 294 NDDKFT---------------NLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSS 338
Query: 243 -GYAFVKFTTKETATHA 258
G+ FV F E+A A
Sbjct: 339 LGFGFVSFQNPESAIKA 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 18/289 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAM 66
++V NL SV L LFS+ G V CKV + E G Y F++F A A+ +
Sbjct: 210 NIFVKNLSSSVDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNL 269
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N +F ++++ V + + ++++ L +I + +K F+ FG I + +
Sbjct: 270 NGSLFNDRKLHVATFIKKSERSANNDDKFTNLYMKHLDDDITEELVKLKFSQFGSIVSVK 329
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
I++ P S G+ FVSF A A + MNG LGS+++ + +K ERK+
Sbjct: 330 IMKRPDG-SSLGFGFVSFQNPESAIKAQSTMNGMLLGSKALYVARAQKK-----EERKQY 383
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
+E+ + + +N VY +++++ + F FG I +V ++
Sbjct: 384 LQRLHEEKRNEIMTRCNESN--VYIKNIHDEVDDDALRARFVEFGNITSAKVMRDDKGIS 441
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHT--VKCFWGKESENNSTLAQ 288
+G+ FV ++T E A A+ ++ G V F KE E + L Q
Sbjct: 442 RGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIFQRKE-ERKAKLQQ 489
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 28/180 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL ++ + L EAF+ G +++ R+ RD T +S Y +V++ +A+A A+ +
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + IR WS R P A +S N ++
Sbjct: 183 NHSLVLDKPIRVMWSNRDPDA---------------------RRSGVGN--IFVKNLSSS 219
Query: 218 LNEELVSKVFSPFGTIVDIRVFK-----EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ + ++FS FG ++ +V K +GY FV+FT++E+A AI +++ + N +
Sbjct: 220 VDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKL 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T LY+ +LD +TEEL+ FSQ G + K+++ P + F+ F + A A +
Sbjct: 299 TNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPESAIKAQST 358
Query: 66 MNKRVFLEKEMKVNWASSPGNQPK-------------QDTSNHYHIFVGDLSPEIETQTL 112
MN + K + V A + + N ++++ ++ E++ L
Sbjct: 359 MNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDAL 418
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
+ F FG I++ +++RD + + S+G+ FV + EA++A+ M G
Sbjct: 419 RARFVEFGNITSAKVMRDDKGI-SRGFGFVCYSTPEEAKSAVNNMRG 464
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD S+ E+LL F G + K++ + N YAF+E++ A
Sbjct: 83 ETSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNQNVNYAFVEYLKSHDANV 142
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N K +K+NWA +Q ++++ +++FVGDL+ +++ +TL F F
Sbjct: 143 ALQTLNGIQIENKIIKINWAFQ--SQQNLNSNDTFNLFVGDLNIDVDDETLSSNFKNFPS 200
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
++ D QT +S+GY FVSF + +A+NA+ M G+ + R IR NW+T++
Sbjct: 201 YIQAHVMWDMQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATKR 254
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
T +A K E+E + N + ++TS+ ++VG+L I LK+ F G
Sbjct: 53 TEIATEEKGNGEEQEEEPNVVPASATHGGRETSDRV-LYVGNLDKSINEDLLKQYFQVGG 111
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+I++ +I+ D + ++ YAFV ++K +A A+ +NG + ++ I+ NW+
Sbjct: 112 QITDVKIMVDKKN-QNVNYAFVEYLKSHDANVALQTLNGIQIENKIIKINWA-------- 162
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------ 234
F N +S ++ G D+++E +S F F + +
Sbjct: 163 --------------FQSQQNLNSNDTFNLFVGDLNIDVDDETLSSNFKNFPSYIQAHVMW 208
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
D++ + +GY FV F ++ A +A++++ +ING ++ W + E
Sbjct: 209 DMQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATKRE 255
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D++ ++ P T Y G E + + FG I+D + EKG F+K+ T E A
Sbjct: 355 DDMIRRAPPRVTTAYIGNIPHFATEADLIPLLQTFGFILDFSHYPEKGCCFIKYDTHEQA 414
Query: 256 THAIESIHNTDINGHTVKCFWGKE 279
I ++ N G ++ WGKE
Sbjct: 415 AVCIVALANFPFQGRNLRTGWGKE 438
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHT 57
+ + +Q T+YVG LD VTE LL LF Q+GPV C + ++ + Y F+EF+
Sbjct: 4 LTERNQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSED 63
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ +N K ++VN ASS +Q D ++F+G+L PEI+ + L + F+
Sbjct: 64 DADYAIKILNMIKLFGKPVRVNKASS--HQKNLDVG--ANLFIGNLDPEIDEKLLYDTFS 119
Query: 118 PFGEISNC-RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
FG I +I+RDP T SKG+AF+++ A+ A+ AMNGQ+L +R I +++ +K
Sbjct: 120 AFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKK 178
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L ++ L E F G + NC + +D T +GY FV F+ + +A+ AI +
Sbjct: 13 VYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKIL 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N L + +R N + +SH K + ++ G +
Sbjct: 73 NMIKLFGKPVRVN--------------KASSHQKNLD----------VGANLFIGNLDPE 108
Query: 218 LNEELVSKVFSPFGTIV-------DIRVFKEKGYAFVKFTTKETATHAIESIH 263
++E+L+ FS FG I+ D KG+AF+ +++ E A A+E+++
Sbjct: 109 IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMN 161
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
+ TVY GG + + E L++++F G +V+ + K++ GY FV+F +++ A +AI
Sbjct: 10 DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAI 69
Query: 260 ESIHNTDINGHTVKC 274
+ ++ + G V+
Sbjct: 70 KILNMIKLFGKPVRV 84
>gi|388519507|gb|AFK47815.1| unknown [Medicago truncatula]
Length = 243
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ V+VT++LL +F GP+ GCK+IR+ Y F+++ AA A
Sbjct: 55 DASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKE-KSSYGFVDYHDRASAALA 113
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++ R + +KVNWA + N ++DTS +++FVGDLSPE+ TL F+ +
Sbjct: 114 IMTLHGRQLYGQALKVNWAYA--NSSREDTSGRFNVFVGDLSPEVTDATLFACFSVYTTC 171
Query: 123 SNCRIVRDPQTLKSKGYAFVSF 144
S+ R++ D +T +SKGY FVSF
Sbjct: 172 SDARVMWDHKTGRSKGYGFVSF 193
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D S ++VG++ + + L E F G ++ C+++R ++ Y FV + +
Sbjct: 52 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKS----SYGFVDYHDR 107
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A A AI ++G+ L ++++ NW A N + S
Sbjct: 108 ASAALAIMTLHGRQLYGQALKVNW------AYANSSREDTS----------------GRF 145
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKF 249
V+ G ++ + + FS + T D RV + KGY FV F
Sbjct: 146 NVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSF 193
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHT 57
+ + +Q T+YVG LD VTE LL LF Q+GPV C + ++ + Y F+EF+
Sbjct: 4 LTERNQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSED 63
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ +N K ++VN ASS +Q D ++F+G+L PEI+ + L + F+
Sbjct: 64 DADYAIKILNMIKLFGKPVRVNKASS--HQKNLDVG--ANLFIGNLDPEIDEKLLYDTFS 119
Query: 118 PFGEISNC-RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
FG I +I+RDP T SKG+AF+++ A+ A+ AMNGQ+L +R I +++ +K
Sbjct: 120 AFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKK 178
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG L ++ L E F G + NC + +D T +GY FV F+ + +A+ AI +
Sbjct: 13 VYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKIL 72
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N L + +R N + +SH K + ++ G +
Sbjct: 73 NMIKLFGKPVRVN--------------KASSHQKNLD----------VGANLFIGNLDPE 108
Query: 218 LNEELVSKVFSPFGTIV-------DIRVFKEKGYAFVKFTTKETATHAIESIH 263
++E+L+ FS FG I+ D KG+AF+ +++ E A A+E+++
Sbjct: 109 IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMN 161
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
+ TVY GG + + E L++++F G +V+ + K++ GY FV+F +++ A +AI
Sbjct: 10 DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAI 69
Query: 260 ESIHNTDINGHTVKC 274
+ ++ + G V+
Sbjct: 70 KILNMIKLFGKPVRV 84
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 29/288 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ P S +IF+ +L I+ + + + F+ FG I +C
Sbjct: 79 MNFDMMYGKPIRIMWSQ---RDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSC 135
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D ++ SKGY FV F + A+ AI +NG L + + + + P
Sbjct: 136 KVANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKV---YVGKFQP-------- 183
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
+T E+ +++ VY F +L++E + K+FS FG I V K
Sbjct: 184 -----RTARLREM-GETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGK 237
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQ 288
KG+ FV F E A A+ +H ++ G K + + + N A+
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAE 285
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LFS+ G + V+ + + F+ F + A A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 66 MN--------KRVFLEKEMKVNWASSPGN----QPKQDTSNHY---HIFVGDLSPEIETQ 110
M+ +++++ + K N S+ Q K + Y +++V +L +
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
LK+ F +G+I++ +++ D +SKG+ FV F K EA A+T MNG+ + ++ +
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVA 377
Query: 171 WSTRK 175
+ RK
Sbjct: 378 LAQRK 382
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 30 QIGPVKGCKVI-------REPG-NDPYAFLEFVHHTVAATALAAMNKRVF--LEKEMKVN 79
QIG + KV+ R+ G ++ Y F+EF H A AL V ++ K+N
Sbjct: 68 QIGTFELPKVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLN 127
Query: 80 WASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA-PFGEISNCRIVRDPQTLKSKG 138
WAS + + + ++ Y IFVGDL+ ++ + L E FA + + +++ D T +S+G
Sbjct: 128 WASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRG 187
Query: 139 YAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEV 198
Y FV F + +A+T MNG + +R IR +T P ++ ++
Sbjct: 188 YGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPAT---PRRSSGDSGSSTPG-------- 236
Query: 199 YNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHA 258
++ TN TVY GG +++E+ + K F+ +G + +++ K FV+F ++ A A
Sbjct: 237 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 296
Query: 259 IESIHNTDINGHTVKCFWGKESENNSTLAQ 288
++ ++ + I V+ WG+ + + A
Sbjct: 297 LQGLNGSVIGKQAVRLSWGRSPSHKQSRAD 326
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFS-QIGPVKGCKVIREPG---NDPYAFLEFVHHTVAATALA 64
+++VG+L VT+E+L LF+ + VKG KVI + + Y F+ F + A+
Sbjct: 145 SIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMT 204
Query: 65 AMNKRVFLEKEMKVNWAS-----------SPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
MN + +++ A+ +PG+ D++N ++VG L P + L+
Sbjct: 205 EMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHS-DGDSTNR-TVYVGGLDPNVSEDELR 262
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
+AFA +G++++ +I Q FV FV + +AE A+ +NG +G +++R +W
Sbjct: 263 KAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWG- 315
Query: 174 RKPP---AMTNERKRQNSHTKTITFDEVYNQSSPT-NCTVYCGGFG 215
R P + + R+N+ F Y +SP + +Y +G
Sbjct: 316 RSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPHPNMYAAAYG 361
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 135/307 (43%), Gaps = 28/307 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + +F S G KVIR+ GN Y F+EF A AL
Sbjct: 48 TTLWMGELEPWMDENFIKGVFLSASGETVNVKVIRDKNSGNAGYCFVEFQTADAATKALG 107
Query: 65 AMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGE 121
V ++ K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 108 LNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 167
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST---RKPPA 178
+ +I+ D + +S+GY FV F + + + A+ M G + G+R +R + +T R
Sbjct: 168 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 227
Query: 179 MTNERKRQNSHTKTITFDEVYNQ------------------SSPTNCTVYCGGFGKDLNE 220
+ + ++N + P N TV+ GG + E
Sbjct: 228 FGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTE 287
Query: 221 ELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKES 280
+ + F FG I +++ KG FV+F + A AI + I V+ WG+ S
Sbjct: 288 DELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGR-S 346
Query: 281 ENNSTLA 287
+NNS +
Sbjct: 347 QNNSGVG 353
>gi|413919829|gb|AFW59761.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
gi|413919830|gb|AFW59762.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
Length = 437
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YV N+ + VT+ +L +F IGPV+GCK+IR+ + F+++ AA A
Sbjct: 271 DSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKE-KSSFGFIDYHDRRYAALA 329
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ ++N R + +KVNWA + + P++ TS H++IFVGDL PE+ TL F+ +
Sbjct: 330 ILSLNGRQLYGQPIKVNWAYT--STPREGTSGHFNIFVGDLCPEVTDATLFAFFSGYSTC 387
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG 159
S+ ++ D +T +S+G+ FVSF + +A++ I +NG
Sbjct: 388 SDASVMWDQKTGRSRGFGFVSFRNQQDAQSEINDLNG 424
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++V ++ ++ L+E F G + C+++R ++ + F+ + +
Sbjct: 268 PGFDSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKS----SFGFIDYHDR 323
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A AI ++NG+ L + I+ NW+ P R+ + H +N
Sbjct: 324 RYAALAILSLNGRQLYGQPIKVNWAYTSTP-----REGTSGH---------FN------- 362
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIES 261
++ G ++ + + FS + T D V + +G+ FV F ++ A I
Sbjct: 363 -IFVGDLCPEVTDATLFAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQDAQSEI-- 419
Query: 262 IHNTDING 269
D+NG
Sbjct: 420 ---NDLNG 424
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 47/328 (14%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIG-PVKGCKVIREPGNDP----YAFLEFVHHTVA 59
S+ +LY+G+LD S E + A+++ +G P K+IR G+ Y F+EF H A
Sbjct: 40 SRSNSLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGSSGYCFVEFPSHLNA 99
Query: 60 ATALAAMNKRV--FLEKEMKVNWAS---SPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
+ AL + + +K+NWAS +PGN+ + +FVGD++P + L E
Sbjct: 100 SNALLKNGLLIPNARNRYLKLNWASFATAPGNE--------HSVFVGDIAPNVSEAQLFE 151
Query: 115 AF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
F + + N +IV D T SKGY FV F +++E + A+ M G +L R++R + ++
Sbjct: 152 LFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALLEMQGVFLNGRAVRVSTTS 211
Query: 174 R----------------------------KPPAMTNERKRQNSHTKTITFDEVYNQSSPT 205
+ + PA N + + + P
Sbjct: 212 KNRSKFQQPLQQQQQPYMQQQQPYVQQQARAPAFNNGNVQSQFIYPVQQQPTLTQYTDPN 271
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNT 265
N TV+ GG ++E+ + F PFG+IV +++ KG FV++ + +A AI +
Sbjct: 272 NTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKMQGY 331
Query: 266 DINGHTVKCFWGKESENNSTLAQPSAPT 293
I ++ WG+ ++ + + Q A +
Sbjct: 332 PIGNSRIRLSWGRSAKQAAVMQQAFASS 359
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 89 KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS-NCRIVRD-PQTLKSKGYAFVSFVK 146
+Q S +++GDL P + ++ +A GE + +++R+ T S GY FV F
Sbjct: 36 EQSASRSNSLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGSSGYCFVEFPS 95
Query: 147 KAEAENAITAMNGQWL---GSRSIRTNWST-RKPPAMTNERKRQNSHTKTITFDEVYNQS 202
A NA+ NG + +R ++ NW++ P N H+ + D N S
Sbjct: 96 HLNASNALLK-NGLLIPNARNRYLKLNWASFATAPG--------NEHSVFVG-DIAPNVS 145
Query: 203 SPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESI 262
++ + LN ++V F + + KGY FVKF + A+ +
Sbjct: 146 EAQLFELFISRYASTLNAKIV------FDQMTGV----SKGYGFVKFGQESEQQRALLEM 195
Query: 263 HNTDINGHTVKC 274
+NG V+
Sbjct: 196 QGVFLNGRAVRV 207
>gi|343427062|emb|CBQ70590.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Sporisorium reilianum SRZ2]
Length = 404
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 77/351 (21%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAATALAAMN 67
++V NL + TE LF +G V+ KV+ R G Y F+E+ A A+ M+
Sbjct: 7 VHVANLPATTTER---ELFGALGAVQTAKVVSTRAAGGLAYGFVEYGDVASAERAVRTMD 63
Query: 68 KRVFLEKEMKVNWA--------------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLK 113
++L +KV WA G + + H+FVGDL+P+++ +
Sbjct: 64 AWLWLGTPIKVCWARHSMHPDAVEAAEAERAGGMRGGAAAGNSHLFVGDLAPDVDDAVVH 123
Query: 114 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWST 173
F+ F +++ R++ DP+T KS+G+ F+S K+EAE I G+WLG R IR NW++
Sbjct: 124 AFFSRFASLADVRVMYDPETGKSRGFGFISLRSKSEAEECIAVTQGRWLGGRQIRVNWAS 183
Query: 174 RK---------------------PPAMTNERKRQNSHT---------------------- 190
+K P + +RQ +T
Sbjct: 184 QKNQGQAAAAVPPAATGMVSSASPHPDPSYTQRQTGYTSPSTPTFDTPSTTPLLPRRHTT 243
Query: 191 ---------KTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF--GTIVDIRVF 239
T T+D++ + T +VY G + + ++F+PF G V+ R+
Sbjct: 244 LASAPRLPASTPTYDQILASAPSTQTSVYVGNISPHTTPQDLVRIFAPFNHGQRVEARIP 303
Query: 240 KE--KGYAFVKFTTKETATHAIESIHNTDINGHT--VKCFWGKESENNSTL 286
+GY FV T+ A AI ++ + H+ ++ W K+ S +
Sbjct: 304 PPPGRGYGFVTLTSHAQAASAICALSMQGVFLHSRWLRFGWQKDRGPGSRM 354
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 18/234 (7%)
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNG-QWLGSRSI 167
T T +E F G + ++V + Y FV + A AE A+ M+ WLG+ I
Sbjct: 15 TTTERELFGALGAVQTAKVVST-RAAGGLAYGFVEYGDVASAERAVRTMDAWLWLGT-PI 72
Query: 168 RTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVF 227
+ W A + + + ++ N ++ G D+++ +V F
Sbjct: 73 KVCW------ARHSMHPDAVEAAEAERAGGMRGGAAAGNSHLFVGDLAPDVDDAVVHAFF 126
Query: 228 SPFGTIVDIRVF------KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
S F ++ D+RV K +G+ F+ +K A I + G ++ W +
Sbjct: 127 SRFASLADVRVMYDPETGKSRGFGFISLRSKSEAEECIAVTQGRWLGGRQIRVNWASQKN 186
Query: 282 NNSTLAQPSAPTTPQPNSTAPQFPYIYNQ-QMGYWYPQAAAYT--ATAAQLPQQ 332
A T +S +P Y Q Q GY P + +T LP++
Sbjct: 187 QGQAAAAVPPAATGMVSSASPHPDPSYTQRQTGYTSPSTPTFDTPSTTPLLPRR 240
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 98 IFVGDLSPEIETQTLKEAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
++VG++SP Q L FAPF G+ RI P +GY FV+ A+A +AI
Sbjct: 271 VYVGNISPHTTPQDLVRIFAPFNHGQRVEARIPPPP----GRGYGFVTLTSHAQAASAIC 326
Query: 156 A--MNGQWLGSRSIRTNWSTRKPPAMTNERKRQNS 188
A M G +L SR +R W + P + + +++
Sbjct: 327 ALSMQGVFLHSRWLRFGWQKDRGPGSRMQHRSESA 361
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 25/272 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + +IF+ +L +I+ + L + FA FG + +C
Sbjct: 105 LNYSLIKGRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSC 161
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D +SKGY FV + AE AI A+NG L + + + + R+R
Sbjct: 162 KVATDEHG-RSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISR---KASSRER 217
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRV-----FK 240
Q+ +E+ Q + +Y ++ ++ K+F FG + + +
Sbjct: 218 QSK------LEEMKAQFT----NIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQ 267
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F T E A A+E++H+++ +G +
Sbjct: 268 SRGFGFVNFETHEEAQKAVETLHDSEYHGRKL 299
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 22/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAMN 67
+++ NLD + + L F+ G V CKV E G Y F+ + A TA+ A+N
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVN 193
Query: 68 KRVFLEKEMKVNW-----ASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
+ +K++ V ASS Q K + + +I+V +L PE+ + F FG
Sbjct: 194 GMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFG 253
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+++ I D Q +S+G+ FV+F EA+ A+ ++ R + + + +K
Sbjct: 254 NVTSAVIQTDEQG-QSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKA---- 308
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
+R+ K+ +V S +Y D+++E + + F PFG+I +V +
Sbjct: 309 ---EREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDERLRQEFEPFGSITSAKVMR 365
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDI 267
+ KG+ FV F++ + AT A+ ++N I
Sbjct: 366 DEKGTSKGFGFVCFSSPDEATKAVAEMNNKMI 397
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAAT 61
++Q T +YV NLD VT++ LF Q G V + E G + F+ F H A
Sbjct: 225 KAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQSRGFGFVNFETHEEAQK 284
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ ++ +++F+ E+E ++ + K ++++ +L +I+
Sbjct: 285 AVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDID 344
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
+ L++ F PFG I++ +++RD + SKG+ FV F EA A+ MN + +GS+ +
Sbjct: 345 DERLRQEFEPFGSITSAKVMRDEKGT-SKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLY 403
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 404 VSLAQRR------EVRRQQLESQIAQRNQIRMQQA 432
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 206 NCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAI 259
+ ++Y G + E ++ ++F+ G + IRV ++ GYA+V + A+
Sbjct: 43 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 102
Query: 260 ESIHNTDINGHTVKCFW 276
E ++ + I G + W
Sbjct: 103 EQLNYSLIKGRACRIMW 119
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 29/273 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + ++ W+ P + +IF+ +L +I+ + L + FA FG + +
Sbjct: 104 QLNYSSIKGRACRIMWSQ---RDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 160
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C++ D +SKGY FV + AE AI A+NG L + + + + ++
Sbjct: 161 CKVATDEHG-RSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGYHISR-------KE 212
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
RQ+ +E+ Q + +Y F ++ EE +F FG++ + ++
Sbjct: 213 RQSK------LEEMKAQFT----NIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEG 262
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F + A A+E +H+ D G +
Sbjct: 263 RSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKL 295
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKV-IREPGNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD + + L F+ G V CKV E G Y F+ + A TA+ A+
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 192
Query: 67 NKRVFLEKEMKVNW-ASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + S Q K + + +I+V + PE+ + F FG ++
Sbjct: 193 NGMLLNDKKVYVGYHISRKERQSKLEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVT 252
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ I RD + +S+G+ FV+F EA+ A+ ++ + + + + +K
Sbjct: 253 SAVIQRDDEG-RSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKLFVSRAQKKA------- 304
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+R+ ++ ++ S +Y DL+++ + F PFG+I +V ++
Sbjct: 305 EREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLDDDRLRTEFEPFGSITSAKVMRDEK 364
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDI 267
KG+ FV F++ + AT A+ ++N I
Sbjct: 365 GTSKGFGFVCFSSPDEATKAVAEMNNKMI 393
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR--EPGNDPYAFLEFVHHTVAAT 61
++Q T +YV N D VTEE ALF Q G V + R E + + F+ F H A
Sbjct: 221 KAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQK 280
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ ++ K++F+ E+E ++ + K ++++ +L +++
Sbjct: 281 AVEGLHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLD 340
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L+ F PFG I++ +++RD + SKG+ FV F EA A+ MN + +G++ +
Sbjct: 341 DDRLRTEFEPFGSITSAKVMRDEKG-TSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 399
Query: 169 TNWSTRK 175
+ + R+
Sbjct: 400 VSLAQRR 406
>gi|388511131|gb|AFK43627.1| unknown [Lotus japonicus]
Length = 167
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATA 62
D S ++YVGN+ VT+ LL LF+ G ++GCK+IR+ Y F+++ + AA A
Sbjct: 10 DSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKE-KSSYGFVDYYDRSSAAFA 68
Query: 63 LAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEI 122
+ +N R + +KVNWA + ++DTS H++IFVGDLSPE+ TL F+ +
Sbjct: 69 IVTLNGRNLFGQPIKVNWAYA--RSQREDTSGHFNIFVGDLSPEVTDATLYACFSAYPSC 126
Query: 123 SNCRIVRDPQTLKSKGYAFVSF 144
S+ R++ D QT +S+G+ FVSF
Sbjct: 127 SDARVMWDQQTGRSRGFGFVSF 148
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 32/172 (18%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P D+S ++VG++ P++ L+E FA G + C+++R ++ Y FV + +
Sbjct: 7 PGFDSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKEKS----SYGFVDYYDR 62
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
+ A AI +NG+ L + I+ NW+ + ++R+ + H +N
Sbjct: 63 SSAAFAIVTLNGRNLFGQPIKVNWAYAR-----SQREDTSGH---------FN------- 101
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF------KEKGYAFVKFTTKE 253
++ G ++ + + FS + + D RV + +G+ FV F ++
Sbjct: 102 -IFVGDLSPEVTDATLYACFSAYPSCSDARVMWDQQTGRSRGFGFVSFRNQQ 152
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 33/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LY+G+L VTE +L FS GP+ +V R+ + YA++ F A AL
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S +IF+ +L I+ + L + F+ FG I +C
Sbjct: 72 MNFDVVKGKPIRIMWSQ---RDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGY FV F + A+ AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 180
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF-GTIVDIRVF---- 239
+ + + VY FG D+++E + + F + G + ++V
Sbjct: 181 AE------------FGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEG 228
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 229 GKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAI 262
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 22/272 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ Y F+ F A A+ MN
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAADKAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPF-GEISN 124
+ ++++ V S + + ++++ + +++ + L+E F + G+ +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAEFGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLS 220
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
+++ D + KSKG+ FVSF + +A+ A+ MN + L R+I + +K +
Sbjct: 221 VKVMMD-EGGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQKKA-------E 272
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
RQ + + S +Y ++N+E + K FSPFGTI +V E
Sbjct: 273 RQTELKRKFEMLKQERMSKYQGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGR 332
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV F++ E AT A+ T++NG +
Sbjct: 333 SRGFGFVCFSSPEEATKAV-----TEMNGRII 359
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQ-IGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALA 64
T +Y+ N + +E L F Q +G KV+ + G + F+ F H A A+
Sbjct: 191 TNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVD 250
Query: 65 AMNKRVFLEKEMKVNWASSPGNQP----------KQDTSNHY---HIFVGDLSPEIETQT 111
MN + + + V A + KQ+ + Y +++V +L I +
Sbjct: 251 EMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQGVNLYVKNLDDNINDER 310
Query: 112 LKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNW 171
L + F+PFG I++ +++ + +S+G+ FV F EA A+T MNG+ +GS+ +
Sbjct: 311 LWKEFSPFGTITSAKVMMEEG--RSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVAL 368
Query: 172 STRK 175
+ RK
Sbjct: 369 AQRK 372
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FSP G I+ IRV ++ GYA+V F A A++
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKES 280
+++ + G ++ W +
Sbjct: 71 TMNFDVVKGKPIRIMWSQRD 90
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 293 QGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVT 352
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVG 101
MN R+ K + V A + TS G
Sbjct: 353 EMNGRIIGSKPLYVALAQRKEERKMHLTSQFMQRLAG 389
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 34/274 (12%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GP+ +V R+ + YA + F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L+ I+ + L + F+ FG I +C
Sbjct: 72 MNFDVIKGKPVRIMWSQ---RDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSC 128
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN-WSTRKPPAMTNERK 184
++V D SKG+ FV F + AE AI MNG L R + + +RK ER+
Sbjct: 129 KVVCDENG--SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGQFKSRK------ERE 180
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF---- 239
+ + TK T VY FG ++++ ++ +F FG ++ ++V
Sbjct: 181 AELGTRTKEFT-------------NVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEG 227
Query: 240 -KEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
K KG+ FV F E A A++ ++ ++NG +
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHI 261
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 132/273 (48%), Gaps = 25/273 (9%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NL+ ++ + L FS G + CKV+ E G+ + F+ F A A+ MN
Sbjct: 101 VFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDENGSKGHGFVHFETEEAAERAIEKMNG 160
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + T ++++ + ++ +TL F FG++ +
Sbjct: 161 MLLNDRKVFVGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLFGRFGQVLSV 220
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++ D + KSKG+ FVSF + +A+ A+ MNG+ L + I + +K +++
Sbjct: 221 KVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQKKVDRHIELKRK 279
Query: 186 --QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
Q + + I + + +Y +++E + K FSPFGTI +V E
Sbjct: 280 FEQVTQDRGIRYQGI---------NLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGG 330
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ +++NG V
Sbjct: 331 RSKGFGFVCFSSPEEATKAV-----SEMNGRIV 358
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + ++ L LF + G V KV+ + G + F+ F H A A+
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 66 MNKRVFLEKEMKVNWASSPGN----------QPKQDTSNHY---HIFVGDLSPEIETQTL 112
MN + K + V A + Q QD Y +++V +L I+ + L
Sbjct: 251 MNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGIDDERL 310
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWS 172
++ F+PFG I++ +++ + +SKG+ FV F EA A++ MNG+ + ++ + +
Sbjct: 311 QKEFSPFGTITSTKVMTEGG--RSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALA 368
Query: 173 TRK 175
RK
Sbjct: 369 QRK 371
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
++Y G D+ E ++ + FS G I+ IRV+++ GYA V F A A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 261 SIHNTDINGHTVKCFWGKE 279
+++ I G V+ W +
Sbjct: 71 TMNFDVIKGKPVRIMWSQR 89
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LYV NLD + +E L FS G + KV+ E G + F+ F A A++
Sbjct: 292 QGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVS 351
Query: 65 AMNKRVFLEKEMKVNWA 81
MN R+ K + V A
Sbjct: 352 EMNGRIVATKPLYVALA 368
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 34/283 (12%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E LYVG+LD V+E L +FS +GP+ ++ R+ + YA++ F H + A+
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
ALA +N + K M++ W+ P + ++FV +L P I + +L++ F FG
Sbjct: 85 KALACLNHTKLMGKPMRIMWSH---RDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFG 141
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
I +C++ + KSK + FV F A A+ A+N L + + + +K
Sbjct: 142 NILSCKVAE--ENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKC---- 195
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ERK + TK TN VY G+DL E+++ FS FG + + + K
Sbjct: 196 -ERKEASEETKF------------TN--VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMK 240
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +G+ FV F + + A A+E+++ + + K F G+
Sbjct: 241 DGNGKSRGFGFVNFESPDEAKKAVEALNGAMLG--SKKLFVGR 281
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 135/281 (48%), Gaps = 16/281 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALAAMN 67
L+V NLD S+ L +F + G + CKV E G + F++F A AL A+N
Sbjct: 118 NLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALN 177
Query: 68 KRVFLEKEMKVN-WASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ K++ V+ + + + + +++V +L ++ +++ F+ FG++
Sbjct: 178 DTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVV 237
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
I++D KS+G+ FV+F EA+ A+ A+NG LGS+ + + +K ER+
Sbjct: 238 IMKDGNG-KSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKA-----ERQEL 291
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
H K + + + + +Y ++++ + + FS G I +V +
Sbjct: 292 LKHEKEMVNCNIGKEKAS---NLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLS 348
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG+ FV F+T E A A+ +++ T ++G ++ + E+
Sbjct: 349 KGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKED 389
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVA 59
+E++ T +YV NL +TE+++ FS+ G V G VI + GN + F+ F A
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKV-GTVVIMKDGNGKSRGFGFVNFESPDEA 260
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPG---------------NQPKQDTSNHYHIFVGDLS 104
A+ A+N + K++ V A N K+ SN ++V +L
Sbjct: 261 KKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASN---LYVKNLD 317
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
++ L+E F+ G+I++ +++R L SKG+ FV F EA+ A+T +NG L
Sbjct: 318 ASVDDDKLQEHFSSCGQITSAKVMRHDSGL-SKGFGFVCFSTSEEAQKALTTLNGTLLHG 376
Query: 165 RSIRTNWSTRK 175
RS+ + RK
Sbjct: 377 RSLYIAMAQRK 387
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 114 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 173
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 174 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 233
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 234 KVMRDPSG-KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 291
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 292 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 345
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 346 KGFGFVCFSSPEEATKAV-----TEMNGRIV 371
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 49/293 (16%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKG---CKVIREPGNDPYAFLEFVH---------- 55
+LYVG+L VTE +L FS GPV C+ + + YA++ F
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTSTS 71
Query: 56 ---HTVAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTL 112
TV AL MN V K +++ W+ P S ++F+ +L I+ + L
Sbjct: 72 SSPLTVTERALDTMNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKAL 128
Query: 113 KEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NW 171
+ F+ FG I +C++V D SKGYAFV F + A+ AI MNG L R + +
Sbjct: 129 YDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRF 186
Query: 172 STRKPPAMTNERKRQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPF 230
+RK ER+ + + K T VY FG+++++E + ++FS F
Sbjct: 187 KSRK------EREAELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQF 227
Query: 231 GTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
G + ++V ++ KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 228 GKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 278
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 204 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 263
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 264 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 318
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 319 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 376
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 377 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 416
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 305 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 364
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 365 EMNGRIVGSKPLYVALA-----QRKEERKAH 390
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFSQIG V +V R+ + YA++ + AL
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + FA FG I +C
Sbjct: 120 LNYTIIKGRPCRIMWSQ---RDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSC 176
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D +T SKGY FV + A AI +NG L + + K + R
Sbjct: 177 KVAQD-ETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPK-------KDR 228
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
Q+ F+E+ +++ TN VY D+ E+ ++F +G + + ++
Sbjct: 229 QSK------FEEM--KANFTN--VYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGK 278
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+G+ FV FTT E+A+ A++ ++N D +G +
Sbjct: 279 SRGFGFVNFTTHESASKAVDELNNKDFHGQDL 310
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N ++VG+L P + L E F+ G +++ R+ RD T +S GYA+V++ + E A
Sbjct: 57 NSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKA 116
Query: 154 ITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGG 213
+ +N + R R WS R P + KT V+
Sbjct: 117 LEELNYTIIKGRPCRIMWSQRDP-----------ALRKT------------GQGNVFIKN 153
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTKETATHAIESIHNTDIN 268
++ + + F+ FG I+ +V ++ KGY FV + T E A+ AI+ ++ +N
Sbjct: 154 LDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLN 213
Query: 269 GHTV 272
V
Sbjct: 214 EKKV 217
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 205 TNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATHA 258
+ ++Y G + E ++ ++FS G + IRV ++ GYA+V + A
Sbjct: 57 NSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKA 116
Query: 259 IESIHNTDINGHTVKCFW 276
+E ++ T I G + W
Sbjct: 117 LEELNYTIIKGRPCRIMW 134
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 76 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 135
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 136 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 195
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP + KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 196 KVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA-ELKR 253
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I +V E
Sbjct: 254 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 307
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 308 KGFGFVCFSSPEEATKAV-----TEMNGRIV 333
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 23 LLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALAAMNKRVFLEKEMKVN 79
+L FS GPV +V R+ + YA++ F A AL MN V K +++
Sbjct: 1 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM 60
Query: 80 WASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGY 139
W+ P S ++F+ +L I+ + L + F+ FG I +C++V D SKGY
Sbjct: 61 WSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGY 115
Query: 140 AFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERKRQ-NSHTKTITFDE 197
AFV F + A+ AI MNG L R + + +RK ER+ + + K T
Sbjct: 116 AFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------EREAELGAKAKEFT--- 166
Query: 198 VYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-----KGYAFVKFTTK 252
VY FG+++++E + ++FS FG + ++V ++ KG+ FV +
Sbjct: 167 ----------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 216
Query: 253 ETATHAIESIHNTDINGHTVKCFWGK 278
E A A+E ++ +I+G + F G+
Sbjct: 217 EDANKAVEEMNGKEISGKII--FVGR 240
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + F+ + H A A+
Sbjct: 166 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 225
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 226 MNGKEISGKIIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 280
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I++ +++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 281 DDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 338
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 339 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 378
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 6 QPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALA 64
Q LY+ NLD ++ +E L FS G + KV+ E G + F+ F A A+
Sbjct: 267 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 326
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNH 95
MN R+ K + V A Q K++ H
Sbjct: 327 EMNGRIVGSKPLYVALA-----QRKEERKAH 352
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 140/319 (43%), Gaps = 38/319 (11%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVA 59
D+S+ TTL++G L+ + E + +F S G KVIR+ GN Y F+EF + A
Sbjct: 103 DQSK-TTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVEFQNADAA 161
Query: 60 ATALAAMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF- 116
+ AL V ++ K+NWAS G ++D Y IFVGDL PE+ L F
Sbjct: 162 SKALGLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQ 221
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
A F + +I+ D + +S+GY FV F + + + A+ M G + G+R +R ST P
Sbjct: 222 ARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRI--STATP 279
Query: 177 PAMTNERKRQNSHTKTITFDEV---------------------YNQSS-------PTNCT 208
N H YN ++ P N T
Sbjct: 280 KNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGGYNPATQMNQFTDPNNTT 339
Query: 209 VYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDIN 268
V+ GG + E+ + F FG I +++ KG FV+F + A AI + I
Sbjct: 340 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIG 399
Query: 269 GHTVKCFWGKESENNSTLA 287
V+ WG+ S+NNS +
Sbjct: 400 NSRVRLSWGR-SQNNSGVG 417
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 33/293 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E T LYVGNL SV L LF G + +V+ + + Y F+++ A+
Sbjct: 289 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 348
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN-----QPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ MN R+ +KV P + QP ++T + ++V +LS + T L
Sbjct: 349 EAIKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKET-DMAKLYVCNLSLSMNTDRLIHL 407
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT------ 169
F PFGE++N ++ +D T SKGY FV + A A+ +NG+ + R I
Sbjct: 408 FLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIP 467
Query: 170 ----NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
N + P N S T+T+ ++ N +Y ++ + + +
Sbjct: 468 STLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSN--------LYVCNMPSSIDTKKLVE 519
Query: 226 VFSPFGTIVDIRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+F PFG I RV F KGY F+KFT E+AT AI +++ + G +
Sbjct: 520 LFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 572
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 48/294 (16%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFVHHTVAA 60
E+ LYV NL +S+ + L LF G V KV ++ + Y F+++ AA
Sbjct: 384 ETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAA 443
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQ-------------------------DTSNH 95
A+ +N R+ ++++V + P P D SN
Sbjct: 444 EAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSN- 502
Query: 96 YHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIT 155
++V ++ I+T+ L E F PFG+I++ R+V DP T +KGY F+ F A AI
Sbjct: 503 --LYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 560
Query: 156 AMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFG 215
AMNG +G I + P A + + T+ I +Y + P + T
Sbjct: 561 AMNGALVGGEMIIVRVAGLSPSASISAVQT----TQDINKSRLYITNLPRSMTA------ 610
Query: 216 KDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+++V+ +F+PFG I +V Y+ V + +AT A++ + + G
Sbjct: 611 ----DKMVN-LFAPFGQIT--KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEG 657
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 32/275 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
E + LYV N+ S+ + L LF G + +V+ +P Y F++F A
Sbjct: 497 EIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESAT 556
Query: 61 TALAAMNKRVFLEKEMKVNWA------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+AAMN + + + V A S Q QD N +++ +L + +
Sbjct: 557 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDI-NKSRLYITNLPRSMTADKMVN 615
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
FAPFG+I+ + L + Y+ V + A A+ M+G + + + R
Sbjct: 616 LFAPFGQIT--------KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEGKRLVVK---R 664
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
TN + K I +Y P++ L E+ +F PFG +V
Sbjct: 665 SELCTTNASQAGGKPIKEIDMANLYVGRVPSS-----------LTEDQFIDLFRPFGRVV 713
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
R+F+ + Y V+F A AI+ + I G
Sbjct: 714 QARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGG 748
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
L K+ + S P + K ++ +++VG+L + + L E F PFG+I R+V D
Sbjct: 269 LHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC 328
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
T S+GY FV + A AI MNG+ + +++ + P+ + ++ + T
Sbjct: 329 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGTALKVRVTGF--PSSEDNSQQPSKETD 386
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYA 245
+Y +N + + +F PFG + + +V K+ KGY
Sbjct: 387 M--------------AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYG 432
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVK 273
FV++++ A A+ ++ ++G ++
Sbjct: 433 FVQYSSPHHAAEAVIHLNGRLVDGRKIE 460
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+ LY+ NL S+T + + LF+ G + KV+ N Y+ + + A A+ M+
Sbjct: 597 SRLYITNLPRSMTADKMVNLFAPFGQI--TKVLM---NLEYSLVWYADAPSATKAVQHMD 651
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
KR+ +++ E+ AS G +P ++ + +++VG + + + F PFG
Sbjct: 652 GYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-DMANLYVGRVPSSLTEDQFIDLFRPFG 710
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R+ R + Y V F + A AI ++G +G + + PA +
Sbjct: 711 RVVQARMFR------FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGL--PAES 762
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
N K + T ++ +E Q TN +Y +N E + +F P G I +V
Sbjct: 763 NAAK--GALTSQMSSNE-QGQIDMTN--LYVSHLPSYVNNERLIDLFLPCGQITQAKVVV 817
Query: 241 E------KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
E KG+ FVKF +A A+ ++ ++GH ++
Sbjct: 818 ERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 856
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG + S+TE+ LF G V ++ R Y + F + + AA A+ ++
Sbjct: 688 LYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQRYGMVRFDNPSCAAAAIDHLDGY 744
Query: 70 VFLEKEMKVNWASSP-------GNQPKQDTSNH------YHIFVGDLSPEIETQTLKEAF 116
+ V A P G Q +SN +++V L + + L + F
Sbjct: 745 QIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLF 804
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
P G+I+ ++V + T SKG+ FV F A A+T MNG L + + P
Sbjct: 805 LPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 864
Query: 177 PAMTNERKRQNSH 189
AM++ SH
Sbjct: 865 DAMSSYMAHFYSH 877
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 39/297 (13%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GND-PYAFLEFVHHT 57
M D+ T L V L S+T++ L +LFS +G V+ K+IR+ G+ Y F+ FV+
Sbjct: 45 MEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPN 104
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A++ +N K +KV++A +P DT ++++ L + Q L++ FA
Sbjct: 105 DAERAISTLNGLRLQSKTIKVSFA-----RPSSDTIKDANLYISGLPRTLGQQDLEDMFA 159
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW--LGSRSIRTNWSTRK 175
FG I N R++ D + S+G AF+ F K++EAE+A+ +NG GS I ++
Sbjct: 160 SFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFAVNP 219
Query: 176 PPAMTNERKRQNSHTKTITFDE-VYNQS-----SPTNCT-----------------VYCG 212
A ++ Q H ++ F V++Q+ SP + ++
Sbjct: 220 NQARNSQMMSQMYHGQSRRFGGPVHHQTQRFRFSPMSTDHMGNGGGASGNASSGWCIFIY 279
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIH 263
+D +E ++ ++F PFG +V+++V ++ KG+ FV T E A AI S++
Sbjct: 280 NLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLN 336
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q +D ++ V L + L+ F+ GE+ + +++RD S GY FV+FV
Sbjct: 43 QMMEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVN 102
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
+AE AI+ +NG L S++I+ +++ +P + T + +
Sbjct: 103 PNDAERAISTLNGLRLQSKTIKVSFA--RPSSDTIK-----------------------D 137
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
+Y G + L ++ + +F+ FG I++ RV + +G AF++F + A A++
Sbjct: 138 ANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVK 197
Query: 261 SIHNTDINGHT 271
+NGHT
Sbjct: 198 H-----LNGHT 203
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
IF+ +L+ + + L + F PFG + N +++RD T K KG+ FV+ EA AI ++
Sbjct: 276 IFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSL 335
Query: 158 NGQWLGSRSIRTNWSTRK 175
NG +G + ++ ++ T K
Sbjct: 336 NGYRMGDKVLQVSFKTSK 353
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 138/299 (46%), Gaps = 21/299 (7%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVK-GCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TL++G ++ + E + +FS KVIR+ GN Y F+EF A ALA
Sbjct: 42 TLWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSGNAGYCFVEFSTPEAAQKALAL 101
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V ++ K+NWAS G ++D Y IFVGDL PE+ L F + F
Sbjct: 102 NGTPVPNSQRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSC 161
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK-----PP 177
+ +I+ D T +S+GY FV F +++ + A+ M G + G+R +R + +T K PP
Sbjct: 162 KSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTATPKTRYMMPP 221
Query: 178 A------MTNERKRQNSHTKTITFDEV--YNQ-SSPTNCTVYCGGFGKDLNEELVSKVFS 228
M F+ + NQ + P N TV+ GG + E+ + F
Sbjct: 222 VPGAQAPMWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 281
Query: 229 PFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLA 287
FG I +++ KG FV+F + A AI + I V+ WG+ S+NNS +
Sbjct: 282 GFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGR-SQNNSGVG 339
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG L VTE+ L + F G + K+ P F++FVH A A+ M
Sbjct: 260 TTVFVGGLSGYVTEDELRSFFQGFGEITYVKI---PPGKGCGFVQFVHRHAAEMAINQMQ 316
Query: 68 KRVFLEKEMKVNWASSPGN 86
++++W S N
Sbjct: 317 GYPIGNSRVRLSWGRSQNN 335
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 8/179 (4%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHT 57
M + +Q T+YVG LD V E +L LF Q GPV + ++ N Y F+EF+
Sbjct: 6 MEERNQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEE 65
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A+ MN K ++VN AS+ NQ D + IF+G+L PE++ + L + F+
Sbjct: 66 DADYAMRIMNMIKLYGKPIRVNKASA--NQKNLDIGAN--IFIGNLDPEVDEKLLYDTFS 121
Query: 118 PFGEISNC-RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
FG I +I+RDP+T SKGYAF++F ++ AI AMNGQ+L +R+I +++ +K
Sbjct: 122 AFGVILQTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRAITISYAFKK 180
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
I+VG L ++ L E F G + N + +D ++ +GY FV F+ + +A+ A+ M
Sbjct: 15 IYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADYAMRIM 74
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N L + IR N + +++ K + ++ G +
Sbjct: 75 NMIKLYGKPIRVN--------------KASANQKNLDI----------GANIFIGNLDPE 110
Query: 218 LNEELVSKVFSPFGTIV-------DIRVFKEKGYAFVKFTTKETATHAIESIH 263
++E+L+ FS FG I+ D KGYAF+ F + E + AIE+++
Sbjct: 111 VDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMN 163
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYA 245
TI E NQ + T+Y GG + +NE ++ ++F G +V++ + K++ GY
Sbjct: 2 TIGVMEERNQ----DATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYG 57
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTL 286
FV+F T+E A +A+ ++ + G ++ K S N L
Sbjct: 58 FVEFMTEEDADYAMRIMNMIKLYGKPIRV--NKASANQKNL 96
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 157/379 (41%), Gaps = 36/379 (9%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG+L VTE +L FS GPV +V R+ + YA++ F A AL
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN + K +++ W+ P S +IF+ +L I+ + + + F+ FG I +C
Sbjct: 79 MNFDMMYGKPIRIMWSQ---RDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSC 135
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + L SKGY FV F + A+ AI +NG L + + + + P M R+
Sbjct: 136 KVANDEE-LNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKV---YVGKFQPRMARLRE- 190
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
T+ T VY F +L++E + K+F FG I V K
Sbjct: 191 MGETTRRFT-------------NVYIKNFADELDKEALEKLFFKFGKITSAAVMVDADGK 237
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNSTLAQPSAPTTPQPNST 300
KG+ FV F E A A+ +H ++ G K + + + N A+ Q
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVER 297
Query: 301 APQFPYIYNQQMGYWYPQAAAYTATAAQLPQQFYQYGQLGYPQGYVGMVGRQVPGWQGIP 360
++ + Y + T L Q F YG++ + GR G+ +
Sbjct: 298 MQRYQGV------NLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRS-KGFGFVC 350
Query: 361 GAQPTAQQMAVAQAQPSMM 379
+P AV + MM
Sbjct: 351 FEKPDEATKAVTEMNGKMM 369
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAA 65
T +Y+ N + +E L LF + G + V+ + + F+ F + A A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFFKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 66 MN--------KRVFLEKEMKVNWASSPGN----QPKQDTSNHY---HIFVGDLSPEIETQ 110
M+ +++++ + K N S+ Q K + Y +++V +L +
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 111 TLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTN 170
LK+ F +G+I++ +++ D +SKG+ FV F K EA A+T MNG+ + ++ +
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNG-RSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVA 377
Query: 171 WSTRK 175
+ RK
Sbjct: 378 LAQRK 382
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 32/262 (12%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAAM 66
LYVG+L EE L FS++G V +V R+ Y ++ + A TAL M
Sbjct: 104 LYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQADAMTALEKM 163
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + L+K ++V W++ P S ++FV +L+ I+ L+E F+ FG+I +C+
Sbjct: 164 NHSLILDKPIRVMWSN---RDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGDILSCK 220
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ R+ S+GY FV F + A+ AI +N R + +K +ER
Sbjct: 221 VARNDDG-TSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKK-----SERSAN 274
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
N D+ Y +Y D+ EEL+ FS FG ++ +++ K
Sbjct: 275 N--------DDKY-------TNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTS 319
Query: 242 KGYAFVKFTTKETATHAIESIH 263
KG+ FV F + ++A A E+++
Sbjct: 320 KGFGFVSFKSPDSAKKAKEAMN 341
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 23/264 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-----YAFLEFVHHTVAATALA 64
++V NL+ + +L LFS+ G + CKV R ND Y F++F A A+
Sbjct: 192 VFVKNLNDHIDNVILQELFSKFGDILSCKVAR---NDDGTSRGYGFVQFAAQESADIAIE 248
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N F +++ V + + + ++++ +L ++ + +K F+ FG + +
Sbjct: 249 NLNNSHFEGRQLHVAHFIKKSERSANNDDKYTNLYMKNLDDDMTEELIKLKFSQFGPLIS 308
Query: 125 CRIV-RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+I+ RD T SKG+ FVSF A+ A AMNG LGS+S+ + +K ER
Sbjct: 309 VKIMKRDDGT--SKGFGFVSFKSPDSAKKAKEAMNGIPLGSKSLYVARAQKKA-----ER 361
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
K+ +E+ +S+ +N VY +++E + + F FG I +++ ++
Sbjct: 362 KQYLQLLHEEKRNEILTKSNGSN--VYIKNISDRVDDETLRERFDEFGNITSVKIMRDDK 419
Query: 242 ---KGYAFVKFTTKETATHAIESI 262
KG+ FV + T + A A+ S+
Sbjct: 420 GISKGFGFVCYNTPDEAKCAVSSM 443
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 29/193 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VGDL + + + L +AF+ G +++ R+ RD T S Y +V++ +A+A A+ M
Sbjct: 104 LYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQADAMTALEKM 163
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
N + + IR WS R P A +S N V+
Sbjct: 164 NHSLILDKPIRVMWSNRDPDA---------------------RRSGVGN--VFVKNLNDH 200
Query: 218 LNEELVSKVFSPFGTIVDIRVFK-----EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
++ ++ ++FS FG I+ +V + +GY FV+F +E+A AIE+++N+ G +
Sbjct: 201 IDNVILQELFSKFGDILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQL 260
Query: 273 K-CFWGKESENNS 284
+ K+SE ++
Sbjct: 261 HVAHFIKKSERSA 273
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDP-YAFLEFVHHTVAA 60
++ + T LY+ NLD +TEEL+ FSQ GP+ K++ R+ G + F+ F A
Sbjct: 275 NDDKYTNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAK 334
Query: 61 TALAAMNKRVFLEKEMKVNWASSPG---------NQPKQD----TSNHYHIFVGDLSPEI 107
A AMN K + V A ++ K++ SN ++++ ++S +
Sbjct: 335 KAKEAMNGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNISDRV 394
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ +TL+E F FG I++ +I+RD + + SKG+ FV + EA+ A+++M G + +
Sbjct: 395 DDETLRERFDEFGNITSVKIMRDDKGI-SKGFGFVCYNTPDEAKCAVSSMRGVMFYDKPL 453
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 454 YVAIAQRK 461
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 34/283 (12%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAA 60
E LYVG+LD V+E L +FS +GP+ ++ R+ + YA++ F H + A+
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
ALA +N + K M++ W+ P + ++FV +L P I + +L++ F FG
Sbjct: 85 KALACLNHTKLMGKPMRIMWSH---RDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFG 141
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
I +C++ + KSK + FV F A A+ A+N L + + + +K
Sbjct: 142 NILSCKVAE--ENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKC---- 195
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
ERK + TK TN VY G+DL E+++ FS FG + + + K
Sbjct: 196 -ERKEASEETKF------------TN--VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMK 240
Query: 241 E-----KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
+ +G+ FV F + + A A+E+++ + + K F G+
Sbjct: 241 DGNGKSRGFGFVNFESPDEAKKAVEALNGAMLG--SKKLFVGR 281
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 135/281 (48%), Gaps = 16/281 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP-YAFLEFVHHTVAATALAAMN 67
L+V NLD S+ L +F + G + CKV E G + F++F A AL A+N
Sbjct: 118 NLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALN 177
Query: 68 KRVFLEKEMKVN-WASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ K++ V+ + + + + +++V +L ++ +++ F+ FG++
Sbjct: 178 DTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVV 237
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
I++D KS+G+ FV+F EA+ A+ A+NG LGS+ + + +K ER+
Sbjct: 238 IMKDGNG-KSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKA-----ERQEL 291
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
H K + + + + +Y ++++ + + FS G I +V +
Sbjct: 292 LKHEKEMVNCNIGKEKAS---NLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLS 348
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESEN 282
KG+ FV F+T E A A+ +++ T ++G ++ + E+
Sbjct: 349 KGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKED 389
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVA 59
+E++ T +YV NL +TE+++ FS+ G V G VI + GN + F+ F A
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKV-GTVVIMKDGNGKSRGFGFVNFESPDEA 260
Query: 60 ATALAAMNKRVFLEKEMKVNWASSPG---------------NQPKQDTSNHYHIFVGDLS 104
A+ A+N + K++ V A N K+ SN ++V +L
Sbjct: 261 KKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASN---LYVKNLD 317
Query: 105 PEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGS 164
++ L+E F+ G+I++ +++R L SKG+ FV F EA+ A+T +NG L
Sbjct: 318 ASVDDDKLQEHFSSCGQITSAKVMRHDSGL-SKGFGFVCFSTSEEAQKALTTLNGTLLHG 376
Query: 165 RSIRTNWSTRK 175
RS+ + RK
Sbjct: 377 RSLYIAMAQRK 387
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 35/311 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQI-GPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TL++G ++ + E + +F+ + G KVIR+ GN Y F+EF A AL
Sbjct: 44 TLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGNAGYCFIEFATPEAAQKALNL 103
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V + K+NWAS G ++D Y IFVGDL PE+ L F + F
Sbjct: 104 NGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSC 163
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +I+ D T +S+GY FV F + + + A+ M G + G+R +R ST P T++
Sbjct: 164 KSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRI--STATPKTRTHQ 221
Query: 183 RKRQNSHTKTITFDEV-------------------------YNQ-SSPTNCTVYCGGFGK 216
H V NQ + P N TV+ GG
Sbjct: 222 YGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSG 281
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
+ E+ + F FG I +++ KG FV+F + A AI + I V+ W
Sbjct: 282 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 341
Query: 277 GKESENNSTLA 287
G+ S+NNS +
Sbjct: 342 GR-SQNNSGVG 351
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG L VTE+ L + F G + K+ P F++FVH A A+ M
Sbjct: 272 TTVFVGGLSGYVTEDELRSFFQGFGEITYVKI---PPGKGCGFVQFVHRHAAEMAINQMQ 328
Query: 68 KRVFLEKEMKVNWASSPGN 86
++++W S N
Sbjct: 329 GYPIGNSRVRLSWGRSQNN 347
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 35/311 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQI-GPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALAA 65
TL++G ++ + E + +F+ + G KVIR+ GN Y F+EF A AL
Sbjct: 44 TLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSGNAGYCFIEFATPEAAQKALNL 103
Query: 66 MNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGEI 122
V + K+NWAS G ++D Y IFVGDL PE+ L F + F
Sbjct: 104 NGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSC 163
Query: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNE 182
+ +I+ D T +S+GY FV F + + + A+ M G + G+R +R ST P T++
Sbjct: 164 KSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRI--STATPKTRTHQ 221
Query: 183 RKRQNSHTKTITFDEV-------------------------YNQ-SSPTNCTVYCGGFGK 216
H V NQ + P N TV+ GG
Sbjct: 222 YGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSG 281
Query: 217 DLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFW 276
+ E+ + F FG I +++ KG FV+F + A AI + I V+ W
Sbjct: 282 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 341
Query: 277 GKESENNSTLA 287
G+ S+NNS +
Sbjct: 342 GR-SQNNSGVG 351
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
TT++VG L VTE+ L + F G + K+ P F++FVH A A+ M
Sbjct: 272 TTVFVGGLSGYVTEDELRSFFQGFGEITYVKI---PPGKGCGFVQFVHRHAAEMAINQMQ 328
Query: 68 KRVFLEKEMKVNWASSPGN 86
++++W S N
Sbjct: 329 GYPIGNSRVRLSWGRSQNN 347
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 135/315 (42%), Gaps = 38/315 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALF-SQIGPVKGCKVIRE--PGNDPYAFLEFVHHTVAATALA 64
TTL++G L+ + E + +F S KVIR+ GN Y F+EF A ALA
Sbjct: 48 TTLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSGNAGYCFVEFQTPEAATKALA 107
Query: 65 AMNKRV-FLEKEMKVNWASSPGNQPKQDTSN-HYHIFVGDLSPEIETQTLKEAF-APFGE 121
V + K+NWAS G ++D Y IFVGDL PE+ L F A F
Sbjct: 108 LNGSGVPNSSRHFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 167
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+ +I+ D + +S+GY FV F + + + A+ M G + G+R +R ST P N
Sbjct: 168 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRI--STATPKNRGN 225
Query: 182 ERKRQNSHTKTI--------------------------TFDEV--YNQ-SSPTNCTVYCG 212
H + F+ NQ + P N TV+ G
Sbjct: 226 HGFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTVFVG 285
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
G + E+ + F FG I +++ KG FV+F + A AI + I V
Sbjct: 286 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRV 345
Query: 273 KCFWGKESENNSTLA 287
+ WG+ S+NNS +
Sbjct: 346 RLSWGR-SQNNSGVG 359
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 29/272 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 43 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 102
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + F FG + +C
Sbjct: 103 LNYSLIKNRACRIMWSQ---RDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSC 159
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + +SKGY FV + A+NAI ++NG L + + + ++R
Sbjct: 160 KVATD-EHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISR-------KER 211
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
Q+ DE+ Q + +Y ++ +E +++F+ +G + V K
Sbjct: 212 QSK------LDEMKAQFT----NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK 261
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV + E A A++ +H+TD+ G +
Sbjct: 262 SKGFGFVNYERHEEAQRAVDELHDTDLKGKKL 293
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P+ T+ ++VG+L P + L E F G +++ R+ RD T +S GYA+V+++
Sbjct: 34 PQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A+ E A+ +N + +R+ R WS R P RK + DE
Sbjct: 94 ADGERALEQLNYSLIKNRACRIMWSQRDPAL----RKTGQGNVFIKNLDEA--------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----KEKGYAFVKFTTKETATHAIESI 262
++ + + F FG ++ +V + KGY FV + T E A +AI+S+
Sbjct: 141 ----------IDNKALHDTFVAFGNVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSV 190
Query: 263 HNTDINGHTV 272
+ +N V
Sbjct: 191 NGMLLNDKKV 200
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 124/271 (45%), Gaps = 24/271 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATALA 64
+++ NLD ++ + L F G V CKV R G Y F+ + A A+
Sbjct: 132 VFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEHGRSKG---YGFVHYETAEAADNAIK 188
Query: 65 AMNKRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++N + +K++ V + S Q K D + ++++ +L E+ + E F +G
Sbjct: 189 SVNGMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGN 248
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+++ + D + KSKG+ FV++ + EA+ A+ ++ L + + + +K
Sbjct: 249 VTSSLVATDEEG-KSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK------ 301
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+R++ ++ ++ S +Y D +++ + F PFG I +V ++
Sbjct: 302 -AEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRD 360
Query: 242 -----KGYAFVKFTTKETATHAIESIHNTDI 267
KG+ FV F++ + AT A+ ++N I
Sbjct: 361 EKGTSKGFGFVCFSSPDEATKAVAEMNNKMI 391
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAAT 61
++Q T LY+ NLD VT+E LF++ G V V E + + F+ + H A
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQR 278
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ ++ K++F+ E+E ++ + K ++++ +L + +
Sbjct: 279 AVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFD 338
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L+ F PFG I++C+++RD + SKG+ FV F EA A+ MN + +G++ +
Sbjct: 339 DDKLRAEFEPFGAITSCKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 397
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 398 VSLAQRR------EVRRQQLESQIAQRNQIRMQQA 426
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 29/272 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALAA 65
+LYVG LD +VTE +L +F+ IGPV +V R+ YA++ +++ AL
Sbjct: 43 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 102
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + F FG + +C
Sbjct: 103 LNYSLIKNRACRIMWSQ---RDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSC 159
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ D + +SKGY FV + A+NAI ++NG L + + + ++R
Sbjct: 160 KVATD-EHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISR-------KER 211
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----K 240
Q+ DE+ Q + +Y ++ +E +++F+ +G + V K
Sbjct: 212 QSK------LDEMKAQFT----NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK 261
Query: 241 EKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV + E A A++ +H+TD+ G +
Sbjct: 262 SKGFGFVNYERHEEAQRAVDELHDTDLKGKKL 293
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 88 PKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
P+ T+ ++VG+L P + L E F G +++ R+ RD T +S GYA+V+++
Sbjct: 34 PQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 93
Query: 148 AEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNC 207
A+ E A+ +N + +R+ R WS R P RK + DE
Sbjct: 94 ADGERALEQLNYSLIKNRACRIMWSQRDPAL----RKTGQGNVFIKNLDEA--------- 140
Query: 208 TVYCGGFGKDLNEELVSKVFSPFGTIVDIRVF-----KEKGYAFVKFTTKETATHAIESI 262
++ + + F FG ++ +V + KGY FV + T E A +AI+S+
Sbjct: 141 ----------IDNKALHDTFVAFGNVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSV 190
Query: 263 HNTDINGHTV 272
+ +N V
Sbjct: 191 NGMLLNDKKV 200
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 124/271 (45%), Gaps = 24/271 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-----REPGNDPYAFLEFVHHTVAATALA 64
+++ NLD ++ + L F G V CKV R G Y F+ + A A+
Sbjct: 132 VFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEHGRSKG---YGFVHYETAEAADNAIK 188
Query: 65 AMNKRVFLEKEMKV-NWASSPGNQPKQD--TSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
++N + +K++ V + S Q K D + ++++ +L E+ + E F +G
Sbjct: 189 SVNGMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGN 248
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTN 181
+++ + D + KSKG+ FV++ + EA+ A+ ++ L + + + +K
Sbjct: 249 VTSSLVATDEEG-KSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK------ 301
Query: 182 ERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+R++ ++ ++ S +Y D +++ + F PFG I +V ++
Sbjct: 302 -AEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRD 360
Query: 242 -----KGYAFVKFTTKETATHAIESIHNTDI 267
KG+ FV F++ + AT A+ ++N I
Sbjct: 361 EKGTSKGFGFVCFSSPDEATKAVAEMNNKMI 391
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI--REPGNDPYAFLEFVHHTVAAT 61
++Q T LY+ NLD VT+E LF++ G V V E + + F+ + H A
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQR 278
Query: 62 ALAAMN------KRVFL-------EKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIE 108
A+ ++ K++F+ E+E ++ + K ++++ +L + +
Sbjct: 279 AVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFD 338
Query: 109 TQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIR 168
L+ F PFG I++C+++RD + SKG+ FV F EA A+ MN + +G++ +
Sbjct: 339 DDKLRAEFEPFGAITSCKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 397
Query: 169 TNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
+ + R+ E +RQ ++ +++ Q +
Sbjct: 398 VSLAQRR------EVRRQQLESQIAQRNQIRMQQA 426
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 31/282 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALA 64
++LYVG+L V++ L A FS+IGPV +V R+ Y ++ F A AL
Sbjct: 13 SSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQALE 72
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + +++ W+ P S +IF+ +L IE + L + F+ FG I +
Sbjct: 73 VLNYESLMGRPIRIMWSQ---RDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C+IV D + +SKGY FV F K+ AE AI +N + R + K ERK
Sbjct: 130 CKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPK-----TERK 183
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
S + + F+ +Y F + + E + ++F+ FG I V K+
Sbjct: 184 ---SQARKVKFN-----------NLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEG 229
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
KG+ FV F + A +A++++H +I G + C + E
Sbjct: 230 KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKE 271
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAMN 67
+++ NLD S+ ++ L FS G + CK++ + Y F+ F A A+ +N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 68 KRVFLEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAPFGEISNCR 126
+ ++ + V + Q ++ +++ + PE + + LKE F FGEI +
Sbjct: 163 NMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSAC 222
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+++D + KSKG+ FV F+ AENA+ M+G+ + R++ + RK +RQ
Sbjct: 223 VMKDSEG-KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRK-------EERQ 274
Query: 187 NSHTKTITFDEVYNQSS-PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ + QSS N +Y +++++ + + FS G+I +V K+
Sbjct: 275 EELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNR 334
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST---------LAQ--- 288
KG+ FV F E A A+ ++ T I + + E+ +AQ
Sbjct: 335 SKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRN 394
Query: 289 PSAPTTPQ-PNSTAPQ--FPYIYNQQMGYWYPQAAAYTA-----TAAQLPQQF 333
P A P P AP FP + Q +++P A ++ AA +P Q
Sbjct: 395 PVASMIPAVPGHAAPHSFFPPAFQQTQRFYHPSGAVLSSQPRWNRAAGIPAQI 447
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+ A+ M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 91/190 (47%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A A++++ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 336 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 395
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 396 AVCIVALANFPFQGRNLRTGWGKERSN 422
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAAT 61
E+ LYVGNLD ++TE++L F GP+ K++ + N YAF+E+ A
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANI 130
Query: 62 ALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGE 121
AL +N + +K+NWA DT +++FVGDL+ ++ +TL+ AF F
Sbjct: 131 ALQTLNGKQIENNIVKINWAFQSQQSSSDDT---FNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRK 175
+ ++ D QT S+GY FVSF + +A+ A+ M GQ L R +R NW+ ++
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 91/190 (47%), Gaps = 30/190 (15%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
++VG+L I LK+ F G I+N +I+ D K+ YAFV + + +A A+ +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135
Query: 158 NGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKD 217
NG+ + + ++ NW+ + ++ + D+ +N ++ G +
Sbjct: 136 NGKQIENNIVKINWAFQ---------------SQQSSSDDTFN--------LFVGDLNVN 172
Query: 218 LNEELVSKVFSPFGTIV------DIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHT 271
+++E + F F + + D++ +GY FV FT+++ A A++++ D+NG
Sbjct: 173 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRP 232
Query: 272 VKCFWGKESE 281
++ W + +
Sbjct: 233 LRINWAAKRD 242
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 196 DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETA 255
D + + P T Y G E + +F FG I+D + + EKG F+K+ T E A
Sbjct: 336 DHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQA 395
Query: 256 THAIESIHNTDINGHTVKCFWGKESEN 282
I ++ N G ++ WGKE N
Sbjct: 396 AVCIVALANFPFQGRNLRTGWGKERSN 422
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDPYAFLEFVHHTVAATALAAMNK 68
+++ NLD S+ + L FS G + CKV+ E G+ YAF+ F A A+ MN
Sbjct: 97 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 156
Query: 69 RVFLEKEMKVNWASSPGNQPKQ---DTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+ ++++ V S + + ++++ + E++ ++LKE F+ FG+ +
Sbjct: 157 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 216
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++RDP T KSKG+ FVS+ K +A A+ MNG+ + + I + +K E KR
Sbjct: 217 KVMRDP-TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQA-ELKR 274
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+ K S +Y +++E + K FSPFG+I V E
Sbjct: 275 KFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVMLEDGRS 328
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F++ E AT A+ T++NG V
Sbjct: 329 KGFGFVCFSSPEEATKAV-----TEMNGRIV 354
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 40/280 (14%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGP--VKGCKVIREPGN-DPYAFLEFVHHTVAATALAA 65
+LYVGNL VTE +L + ++ P + VI+ N Y L+ V VA AL
Sbjct: 12 SLYVGNLHGDVTEAML---YEKLSPRDLTHLWVIKNITNCVLYPRLKCVS-LVAERALDT 67
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
MN V K +++ W+ P S ++F+ +L I+ + L + F+ FG I +C
Sbjct: 68 MNFDVIKGKPIRIMWSQ---RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 124
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT-NWSTRKPPAMTNERK 184
++V D SKGYAFV F + A+ AI MNG L R + + +RK ER+
Sbjct: 125 KVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK------ERE 176
Query: 185 RQ-NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE-- 241
+ + K T VY FG+++++E + ++FS FG + ++V ++
Sbjct: 177 AELGAKAKEFT-------------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPT 223
Query: 242 ---KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
KG+ FV + E A A+E ++ +I+G + F G+
Sbjct: 224 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI--FVGR 261
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GNDPYAFLEFVHHTVAATALAA 65
T +Y+ N V +E L LFSQ G KV+R+P + + F+ + H A A+
Sbjct: 187 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEE 246
Query: 66 MN---------------KRVFLEKEMKVNWASSPGNQPKQDTSNHY---HIFVGDLSPEI 107
MN K+V + E+K + Q KQ+ + Y ++++ +L I
Sbjct: 247 MNGKEISGKVIFVGRAQKKVERQAELKRKF-----EQLKQERISRYQGVNLYIKNLDDTI 301
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
+ + L++ F+PFG I+ ++ + +SKG+ FV F EA A+T MNG+ +GS+ +
Sbjct: 302 DDEKLRKEFSPFGSITRAEVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 359
Query: 168 RTNWSTRKPPA---MTNERKRQNSHTKTITFDEVYNQSSP 204
+ RK +TN+ ++ + + + + + NQ P
Sbjct: 360 YVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP 399
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 39/297 (13%)
Query: 1 MCDESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP--GND-PYAFLEFVHHT 57
M D+ T L V L S+T++ L +LFS +G V+ K+IR+ G+ Y F+ FV+
Sbjct: 24 MEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPN 83
Query: 58 VAATALAAMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
A A++ +N K +KV++A +P DT ++++ L + Q L++ FA
Sbjct: 84 DAERAISTLNGLRLQSKTIKVSFA-----RPSSDTIKDANLYISGLPRTLGQQDLEDMFA 138
Query: 118 PFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQW--LGSRSIRTNWSTRK 175
FG I N R++ D + S+G AF+ F K++EAE+A+ +NG GS I ++
Sbjct: 139 SFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFAVNP 198
Query: 176 PPAMTNERKRQNSHTKTITFDE-VYNQS-----SPTNCT-----------------VYCG 212
A ++ Q H ++ F V++Q+ SP + ++
Sbjct: 199 NQARNSQMMSQMYHGQSRRFGGPVHHQTQRFRFSPMSTDHMGNGGGASGNASSGWCIFIY 258
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIESIH 263
+D +E ++ ++F PFG +V+++V ++ KG+ FV T E A AI S++
Sbjct: 259 NLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLN 315
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 87 QPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 146
Q +D ++ V L + L+ F+ GE+ + +++RD S GY FV+FV
Sbjct: 22 QMMEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVN 81
Query: 147 KAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTN 206
+AE AI+ +NG L S++I+ +++ +P + T + +
Sbjct: 82 PNDAERAISTLNGLRLQSKTIKVSFA--RPSSDTIK-----------------------D 116
Query: 207 CTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYAFVKFTTKETATHAIE 260
+Y G + L ++ + +F+ FG I++ RV + +G AF++F + A A++
Sbjct: 117 ANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVK 176
Query: 261 SIHNTDINGHT 271
+NGHT
Sbjct: 177 H-----LNGHT 182
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAM 157
IF+ +L+ + + L + F PFG + N +++RD T K KG+ FV+ EA AI ++
Sbjct: 255 IFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSL 314
Query: 158 NGQWLGSRSIRTNWSTRK 175
NG +G + ++ ++ T K
Sbjct: 315 NGYRMGDKVLQVSFKTSK 332
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 32/279 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFS IG V +V R+ + YA++ + + AL
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + FA FG I +C
Sbjct: 116 LNYTLIKGRPCRIMWSQ---RDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC 172
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV + A+NAI +NG L + + K + R
Sbjct: 173 KVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAK-------KDR 224
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVF 239
Q+ F+E+ +++ TN VY +D EE +F FG I D
Sbjct: 225 QSK------FEEM--KANFTN--VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESG 274
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV FT+ + A A+E++++ D G K + G+
Sbjct: 275 KSRGFGFVNFTSHDNAAAAVEALNDKDFKGQ--KLYVGR 311
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 112/238 (47%), Gaps = 12/238 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + L F+ G + CKV ++ GN Y F+ + A A+ +
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 67 NKRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + ++ ++ +N +++V ++ + + ++ F FGEI+
Sbjct: 204 NGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEIT 263
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + RD ++ KS+G+ FV+F A A+ A+N + + + + +K
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKK-------H 316
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+R+ K + S +Y D+++E + ++FS +GTI +V ++
Sbjct: 317 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
T +YV N+D TEE LF + G + + R+ + + F+ F H AA A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQ 110
A+N + F +++ V A ++ +++ Y ++++ +LS +I+ +
Sbjct: 296 ALNDKDFKGQKLYVGRAQKK-HEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDE 354
Query: 111 TLKEAFAPFGEISNCRIVRD 130
L+E F+ +G I++ +++RD
Sbjct: 355 KLRELFSSYGTITSAKVMRD 374
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 204 PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATH 257
P + ++Y G + E ++ ++FS G + IRV ++ GYA+V +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 258 AIESIHNTDINGHTVKCFW 276
A+E ++ T I G + W
Sbjct: 112 ALEDLNYTLIKGRPCRIMW 130
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 32/279 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFS IG V +V R+ + YA++ + + AL
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + FA FG I +C
Sbjct: 116 LNYTLIKGRPCRIMWSQ---RDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC 172
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV + A+NAI +NG L + + K + R
Sbjct: 173 KVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAK-------KDR 224
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVF 239
Q+ F+E+ +++ TN VY +D EE +F FG I D
Sbjct: 225 QSK------FEEM--KANFTN--VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESG 274
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV FT+ + A A+E++++ D G K + G+
Sbjct: 275 KSRGFGFVNFTSHDNAAAAVEALNDKDFKGQ--KLYVGR 311
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 112/238 (47%), Gaps = 12/238 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + L F+ G + CKV ++ GN Y F+ + A A+ +
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 67 NKRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + ++ ++ +N +++V ++ + + ++ F FGEI+
Sbjct: 204 NGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEIT 263
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + RD ++ KS+G+ FV+F A A+ A+N + + + + +K
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKK-------H 316
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+R+ K + S +Y D+++E + ++FS +GTI +V ++
Sbjct: 317 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
T +YV N+D TEE LF + G + + R+ + + F+ F H AA A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQ 110
A+N + F +++ V A ++ +++ Y ++++ +LS +I+ +
Sbjct: 296 ALNDKDFKGQKLYVGRAQKK-HEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDE 354
Query: 111 TLKEAFAPFGEISNCRIVRD 130
L+E F+ +G I++ +++RD
Sbjct: 355 KLRELFSSYGTITSAKVMRD 374
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 204 PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATH 257
P + ++Y G + E ++ ++FS G + IRV ++ GYA+V +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 258 AIESIHNTDINGHTVKCFW 276
A+E ++ T I G + W
Sbjct: 112 ALEDLNYTLIKGRPCRIMW 130
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALA 64
++LYVG+L V++ L A FS+IGPV +V R+ Y ++ F A AL
Sbjct: 13 SSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQALE 72
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + +++ W+ P S +IF+ +L IE + L + F+ FG I +
Sbjct: 73 VLNYESLMGRPIRIMWSQ---RDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C+IV D + +SKGY FV F K+ AE AI +N + R + K ERK
Sbjct: 130 CKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPK-----TERK 183
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
S + + F+ +Y ++ P + + E + ++F+ FG I V K+
Sbjct: 184 ---SQARKVKFNNLYIKNFPP-----------ETDNEKLKEMFNEFGEIKSACVMKDSEG 229
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
KG+ FV F + A +A++++H +I G + C + E
Sbjct: 230 KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKE 271
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 37/354 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NLD S+ ++ L FS G + CK++ + Y F+ F A A+ +
Sbjct: 102 NIFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAPFGEISNC 125
N + ++ + V + Q ++ +++ + PE + + LKE F FGEI +
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSA 221
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++D + KSKG+ FV F+ AENA+ M+G+ + R++ + RK +R
Sbjct: 222 CVMKDSEG-KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRK-------EER 273
Query: 186 QNSHTKTITFDEVYNQSS-PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
Q + + QSS N +Y +++++ + + FS G+I +V K+
Sbjct: 274 QEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST---------LAQ-- 288
KG+ FV F E A A+ ++ T I + + E+ +AQ
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYR 393
Query: 289 -PSAPTTPQ-PNSTAPQ--FPYIYNQQMGYWYPQAAAYTA-----TAAQLPQQF 333
P A P P AP FP + Q +++P A ++ AA +P Q
Sbjct: 394 NPVASMIPAVPGHAAPHSFFPPAFQQTQRFYHPSGAVLSSQPRWNRAAGIPAQI 447
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 33/293 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAA 60
E T LYVGNL SV L LF G + +V+ + + Y F+++ A+
Sbjct: 205 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 264
Query: 61 TALAAMNKRVFLEKEMKVNWASSPGN-----QPKQDTSNHYHIFVGDLSPEIETQTLKEA 115
A+ MN R+ +KV P + QP ++T + ++V +LS + T L
Sbjct: 265 EAIKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKET-DMAKLYVCNLSLSMNTDRLIHL 323
Query: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRT------ 169
F PFGE++N ++ +D T SKGY FV + A A+ +NG+ + R I
Sbjct: 324 FLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIP 383
Query: 170 ----NWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSK 225
N + P N S T+T+ ++ N +Y ++ + + +
Sbjct: 384 STLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSN--------LYVCNMPSSIDTKKLVE 435
Query: 226 VFSPFGTIVDIRV------FKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
+F PFG I RV F KGY F+KFT E+AT AI +++ + G +
Sbjct: 436 LFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 488
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 52/296 (17%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPG---NDPYAFLEFV--HHTV 58
E+ LYV NL +S+ + L LF G V KV ++ + Y F+++ HH
Sbjct: 300 ETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHH-- 357
Query: 59 AATALAAMNKRVFLEKEMKVNWASSPGNQPKQ-------------------------DTS 93
AA A+ +N R+ ++++V + P P D S
Sbjct: 358 AAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMS 417
Query: 94 NHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENA 153
N ++V ++ I+T+ L E F PFG+I++ R+V DP T +KGY F+ F A A
Sbjct: 418 N---LYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKA 474
Query: 154 ITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGG 213
I AMNG +G I + P A + V +Y
Sbjct: 475 IAAMNGALVGGEMIIVRVAGLSPSA---------------SISAVQTTQDINKSRLYITN 519
Query: 214 FGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
+ + + + +F+PFG I +V Y+ V + +AT A++ + + G
Sbjct: 520 LPRSMTADKMVNLFAPFGQIT--KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEG 573
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 32/275 (11%)
Query: 4 ESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGN---DPYAFLEFVHHTVAA 60
E + LYV N+ S+ + L LF G + +V+ +P Y F++F A
Sbjct: 413 EIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESAT 472
Query: 61 TALAAMNKRVFLEKEMKVNWA------SSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKE 114
A+AAMN + + + V A S Q QD N +++ +L + +
Sbjct: 473 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDI-NKSRLYITNLPRSMTADKMVN 531
Query: 115 AFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
FAPFG+I+ + L + Y+ V + A A+ M+G + + + R
Sbjct: 532 LFAPFGQIT--------KVLMNLEYSLVWYADAPSATKAVQHMDGYMVEGKRLVVK---R 580
Query: 175 KPPAMTNERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV 234
TN + K I +Y P++ L E+ +F PFG +V
Sbjct: 581 SELCTTNASQAGGKPIKEIDMANLYVGRVPSS-----------LTEDQFIDLFRPFGRVV 629
Query: 235 DIRVFKEKGYAFVKFTTKETATHAIESIHNTDING 269
R+F+ + Y V+F A AI+ + I G
Sbjct: 630 QARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGG 664
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 72 LEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
L K+ + S P + K ++ +++VG+L + + L E F PFG+I R+V D
Sbjct: 185 LHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC 244
Query: 132 QTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQNSHTK 191
T S+GY FV + A AI MNG+ + +++ + P+ + ++ + T
Sbjct: 245 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGTALKVRVTGF--PSSEDNSQQPSKETD 302
Query: 192 TITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE------KGYA 245
+Y +N + + +F PFG + + +V K+ KGY
Sbjct: 303 M--------------AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYG 348
Query: 246 FVKFTTKETATHAIESIHNTDINGHTVK 273
FV++++ A A+ ++ ++G ++
Sbjct: 349 FVQYSSPHHAAEAVIHLNGRLVDGRKIE 376
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMN 67
+ LY+ NL S+T + + LF+ G + KV+ N Y+ + + A A+ M+
Sbjct: 513 SRLYITNLPRSMTADKMVNLFAPFGQI--TKVLM---NLEYSLVWYADAPSATKAVQHMD 567
Query: 68 ------KRVFLEK-EMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFG 120
KR+ +++ E+ AS G +P ++ + +++VG + + + F PFG
Sbjct: 568 GYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-DMANLYVGRVPSSLTEDQFIDLFRPFG 626
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMT 180
+ R+ R + Y V F + A AI ++G +G + + PA +
Sbjct: 627 RVVQARMFR------FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGL--PAES 678
Query: 181 NERKRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFK 240
N K + T ++ +E Q TN +Y +N E + +F P G I +V
Sbjct: 679 NAAK--GALTSQMSSNE-QGQIDMTN--LYVSHLPSYVNNERLIDLFLPCGQITQAKVVV 733
Query: 241 E------KGYAFVKFTTKETATHAIESIHNTDINGHTVK 273
E KG+ FVKF +A A+ ++ ++GH ++
Sbjct: 734 ERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 772
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDPYAFLEFVHHTVAATALAAMNKR 69
LYVG + S+TE+ LF G V ++ R Y + F + + AA A+ ++
Sbjct: 604 LYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQRYGMVRFDNPSCAAAAIDHLDGY 660
Query: 70 VFLEKEMKVNWASSP-------GNQPKQDTSNH------YHIFVGDLSPEIETQTLKEAF 116
+ V A P G Q +SN +++V L + + L + F
Sbjct: 661 QIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLF 720
Query: 117 APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKP 176
P G+I+ ++V + T SKG+ FV F A A+T MNG L + + P
Sbjct: 721 LPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 780
Query: 177 PAMTNERKRQNSH 189
AM++ SH
Sbjct: 781 DAMSSYMAHFYSH 793
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALA 64
++LYVG+L V++ L A FS+IGPV +V R+ Y ++ F A AL
Sbjct: 13 SSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQALE 72
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISN 124
+N + + +++ W+ P S +IF+ +L IE + L + F+ FG I +
Sbjct: 73 VLNYESLMGRPIRIMWSQ---RDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 125 CRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERK 184
C+IV D + +SKGY FV F K+ AE AI +N + R + K ERK
Sbjct: 130 CKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPK-----TERK 183
Query: 185 RQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
S + + F+ +Y ++ P + + E + ++F+ FG I V K+
Sbjct: 184 ---SQARKVKFNNLYIKNFPP-----------ETDNEKLKEMFNEFGEIKSACVMKDSEG 229
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESE 281
KG+ FV F + A +A++++H +I G + C + E
Sbjct: 230 KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKE 271
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 37/354 (10%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP--YAFLEFVHHTVAATALAAM 66
+++ NLD S+ ++ L FS G + CK++ + Y F+ F A A+ +
Sbjct: 102 NIFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYH-IFVGDLSPEIETQTLKEAFAPFGEISNC 125
N + ++ + V + Q ++ +++ + PE + + LKE F FGEI +
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSA 221
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
+++D + KSKG+ FV F+ AENA+ M+G+ + R++ + RK +R
Sbjct: 222 CVMKDSEG-KSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRK-------EER 273
Query: 186 QNSHTKTITFDEVYNQSS-PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE--- 241
Q + + QSS N +Y +++++ + + FS G+I +V K+
Sbjct: 274 QEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 242 --KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENNST---------LAQ-- 288
KG+ FV F E A A+ ++ T I + + E+ +AQ
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYR 393
Query: 289 -PSAPTTPQ-PNSTAPQ--FPYIYNQQMGYWYPQAAAYTA-----TAAQLPQQF 333
P A P P AP FP + Q +++P A ++ AA +P Q
Sbjct: 394 NPVASMIPAVPGHAAPHSFFPPAFQQTQRFYHPSGAVLSSQPRWNRAAGIPAQI 447
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 32/279 (11%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAATALAA 65
+LYVG LD SVTE +L LFS IG V +V R+ + YA++ + + AL
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 66 MNKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNC 125
+N + + ++ W+ P + ++F+ +L I+ + L + FA FG I +C
Sbjct: 116 LNYTLIKGRPCRIMWSQ---RDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC 172
Query: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
++ +D + SKGY FV + A+NAI +NG L + + K + R
Sbjct: 173 KVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAK-------KDR 224
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIV------DIRVF 239
Q+ F+E+ +++ TN VY +D EE +F FG I D
Sbjct: 225 QSK------FEEM--KANFTN--VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESG 274
Query: 240 KEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGK 278
K +G+ FV FT+ + A A+E++++ D G K + G+
Sbjct: 275 KSRGFGFVNFTSHDNAAAAVEALNDKDFKGQ--KLYVGR 311
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 112/238 (47%), Gaps = 12/238 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP-GNDP-YAFLEFVHHTVAATALAAM 66
+++ NLD ++ + L F+ G + CKV ++ GN Y F+ + A A+ +
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHV 203
Query: 67 NKRVFLEKEMKVNWASSPGNQP---KQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEIS 123
N + +K++ V + ++ ++ +N +++V ++ + + ++ F FGEI+
Sbjct: 204 NGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEIT 263
Query: 124 NCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNER 183
+ + RD ++ KS+G+ FV+F A A+ A+N + + + + +K
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKK-------H 316
Query: 184 KRQNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE 241
+R+ K + S +Y D+++E + ++FS +GTI +V ++
Sbjct: 317 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGNDP---YAFLEFVHHTVAATALA 64
T +YV N+D TEE LF + G + + R+ + + F+ F H AA A+
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 65 AMNKRVFLEKEMKVNWASSPGNQPKQDTSNHY--------------HIFVGDLSPEIETQ 110
A+N + F +++ V A ++ +++ Y ++++ +LS +I+ +
Sbjct: 296 ALNDKDFKGQKLYVGRAQKK-HEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDE 354
Query: 111 TLKEAFAPFGEISNCRIVRD 130
L+E F+ +G I++ +++RD
Sbjct: 355 KLRELFSSYGTITSAKVMRD 374
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 204 PTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKEK------GYAFVKFTTKETATH 257
P + ++Y G + E ++ ++FS G + IRV ++ GYA+V +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 258 AIESIHNTDINGHTVKCFW 276
A+E ++ T I G + W
Sbjct: 112 ALEDLNYTLIKGRPCRIMW 130
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 5 SQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIREP---GNDPYAFLEFVHHTVAAT 61
Q TTL++G L+ + E + +++ +G K+IR+ N Y F++F + A
Sbjct: 69 DQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDQATR 128
Query: 62 ALAAMNKRVF--LEKEMKVNWASSPG--NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFA 117
AL +N +V ++ K+NWAS G ++ + D + IFVGDL PE+ L F
Sbjct: 129 ALQ-LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLMSLFQ 187
Query: 118 PFGEISNCR---IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTR 174
G+ ++C+ I+ DP + S+GY FV F + + + A+ M G + G+R +R + +T
Sbjct: 188 --GKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATP 245
Query: 175 KPPAMTNERKRQNSHTKTITFD---------------------EVYNQ-SSPTNCTVYCG 212
K + + NQ + P N TV+ G
Sbjct: 246 KNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVG 305
Query: 213 GFGKDLNEELVSKVFSPFGTIVDIRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTV 272
G + E+ + F FG I +++ KG FV+F + A AI + I V
Sbjct: 306 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 365
Query: 273 KCFWGKESENNSTLA 287
+ WG+ S+NNS A
Sbjct: 366 RLSWGR-SQNNSGPA 379
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAAM 66
LYVG+L SV EE L +F +IG + +V R+ Y ++ ++ AA AL +
Sbjct: 40 LYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKL 99
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + L+K ++V W++ + + N +FV +L+ ++ +L+E F FG+I +C+
Sbjct: 100 NHSLILDKPIRVMWSNRDPDARRSGVGN---VFVKNLNDLVDNVSLQELFCKFGDILSCK 156
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ ++ S+GY FV F + A+ +I +N R + +K TN
Sbjct: 157 VAKNEDG-TSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN----- 210
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
N TN +Y D+ EEL+ FS +G ++ +++ K
Sbjct: 211 -------------NDDKYTN--LYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTS 255
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F E+A A ES++ + T+
Sbjct: 256 KGFGFVSFQNPESAKRAKESMNGMLLGSKTL 286
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 18/311 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAM 66
++V NL+ V L LF + G + CKV + E G Y F++F A ++ +
Sbjct: 127 NVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNL 186
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N F +++ V + + + ++++ +L +I + +K F+ +G + + +
Sbjct: 187 NNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVK 246
Query: 127 IV-RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
I+ RD T SKG+ FVSF A+ A +MNG LGS+++ + +K ERK+
Sbjct: 247 IMKRDDGT--SKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKA-----ERKQ 299
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+E+ +S+ +N VY ++ ++ + + F+ FG I ++ ++
Sbjct: 300 YLQCLHEEKRNEIITKSNGSN--VYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGI 357
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG-KESENNSTLAQPSAPTTPQPNS 299
KG+ FV + T E A A+ ++ G + ++ E + L Q A +
Sbjct: 358 SKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGA 417
Query: 300 TAPQFPYIYNQ 310
T+P P Y Q
Sbjct: 418 TSPVIPTGYPQ 428
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDP-YAFLEFVHHTVAA 60
++ + T LY+ NLD +TEEL+ FSQ G V K++ R+ G + F+ F + A
Sbjct: 211 NDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAK 270
Query: 61 TALAAMNKRVFLEKEMKVNWASSPG---------NQPKQD----TSNHYHIFVGDLSPEI 107
A +MN + K + V A ++ K++ SN ++++ +++ E+
Sbjct: 271 RAKESMNGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSNVYIKNINDEV 330
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
L+E F FG I++ +I+RD + + SKG+ FV + EA+ A++ M G + +
Sbjct: 331 GDDALRERFNEFGNITSAKIMRDEKGI-SKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPL 389
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 390 YVAIAQRK 397
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 13/288 (4%)
Query: 8 TTLYVGNLDVSVTEELLCALFSQIGPVKGCKVIRE---PGNDPYAFLEFVHHTVAATALA 64
+TL++G L +TE ++ +++ +G K+IR+ N Y F+EF A A++
Sbjct: 98 STLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKAMS 157
Query: 65 AMNKRVF--LEKEMKVNWASSPG-NQPKQDTSNHYHIFVGDLSPEIETQTLKEAF-APFG 120
+N V + K+NWAS G + ++ + + IFVGDL PE+ L F + +
Sbjct: 158 -LNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYR 216
Query: 121 EISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPA-M 179
+ +I+ D T S+GY FV F + + + A+T M G + G+R +R +T K M
Sbjct: 217 SCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMATPKSKNHM 276
Query: 180 TNERKRQNSHTKTITF----DEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVD 235
+ + + + F V + PTN TV+ GG + EE + +F FG I+
Sbjct: 277 YSPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTTVFVGGLSGYVTEEELRFLFQNFGEIIY 336
Query: 236 IRVFKEKGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWGKESENN 283
+++ KG FV+F +++A AI + + ++ WG+ N
Sbjct: 337 VKIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWGRSQGGN 384
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 86 NQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 145
N + + N+ +++G+L+P I +++ + GE N +I+RD + + GY FV F
Sbjct: 88 NNDETASHNNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFN 147
Query: 146 KKAEAENAITAMNGQWL--GSRSIRTNWSTRKPPAMTNERKRQNSHTKTITFDEVYNQSS 203
A A A++ +NG + +R + NW++ + + R+ KT F
Sbjct: 148 SPASAMKAMS-LNGTVIPGTNRFFKLNWASGG--GLHDRRE-----GKTPEF-------- 191
Query: 204 PTNCTVYCGGFGKDLNEELVSKVF-------SPFGTIVDIRVFKEKGYAFVKFTTKETAT 256
+++ G G ++ E ++ +F ++D +GY FV+F +
Sbjct: 192 ----SIFVGDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQK 247
Query: 257 HAI 259
A+
Sbjct: 248 RAL 250
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 10 LYVGNLDVSVTEELLCALFSQIGPVKGCKVIREPGND---PYAFLEFVHHTVAATALAAM 66
LYVG+L SV EE L +F +IG + +V R+ Y ++ ++ AA AL +
Sbjct: 40 LYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKL 99
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N + L+K ++V W++ + + N +FV +L+ ++ +L+E F FG+I +C+
Sbjct: 100 NHSLILDKPIRVMWSNRDPDARRSGVGN---VFVKNLNDLVDNVSLQELFCKFGDILSCK 156
Query: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKRQ 186
+ ++ S+GY FV F + A+ +I +N R + +K TN
Sbjct: 157 VAKNEDG-TSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN----- 210
Query: 187 NSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE----- 241
N TN +Y D+ EEL+ FS +G ++ +++ K
Sbjct: 211 -------------NDDKYTN--LYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTS 255
Query: 242 KGYAFVKFTTKETATHAIESIHNTDINGHTV 272
KG+ FV F E+A A ES++ + T+
Sbjct: 256 KGFGFVSFQNPESAKRAKESMNGMLLGSKTL 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 18/311 (5%)
Query: 9 TLYVGNLDVSVTEELLCALFSQIGPVKGCKVIR-EPGNDP-YAFLEFVHHTVAATALAAM 66
++V NL+ V L LF + G + CKV + E G Y F++F A ++ +
Sbjct: 127 NVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNL 186
Query: 67 NKRVFLEKEMKVNWASSPGNQPKQDTSNHYHIFVGDLSPEIETQTLKEAFAPFGEISNCR 126
N F +++ V + + + ++++ +L +I + +K F+ +G + + +
Sbjct: 187 NNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVK 246
Query: 127 IV-RDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSIRTNWSTRKPPAMTNERKR 185
I+ RD T SKG+ FVSF A+ A +MNG LGS+++ + +K ERK+
Sbjct: 247 IMKRDDGT--SKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKA-----ERKQ 299
Query: 186 QNSHTKTITFDEVYNQSSPTNCTVYCGGFGKDLNEELVSKVFSPFGTIVDIRVFKE---- 241
+E+ +S+ +N VY ++ ++ + + F+ FG I ++ ++
Sbjct: 300 YLQRLHEEKRNEIITKSNGSN--VYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGI 357
Query: 242 -KGYAFVKFTTKETATHAIESIHNTDINGHTVKCFWG-KESENNSTLAQPSAPTTPQPNS 299
KG+ FV + T E A A+ ++ G + ++ E + L Q A +
Sbjct: 358 SKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGA 417
Query: 300 TAPQFPYIYNQ 310
T+P P Y Q
Sbjct: 418 TSPVIPTGYPQ 428
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 3 DESQPTTLYVGNLDVSVTEELLCALFSQIGPVKGCKVI-REPGNDP-YAFLEFVHHTVAA 60
++ + T LY+ NLD +TEEL+ FSQ G V K++ R+ G + F+ F + A
Sbjct: 211 NDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAK 270
Query: 61 TALAAMNKRVFLEKEMKVNWASSPG---------NQPKQD----TSNHYHIFVGDLSPEI 107
A +MN + K + V A ++ K++ SN ++++ +++ E+
Sbjct: 271 RAKESMNGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNINDEV 330
Query: 108 ETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAITAMNGQWLGSRSI 167
L+E F FG I++ +I+RD + + SKG+ FV + EA+ A++ M G + +
Sbjct: 331 GDDALRERFNEFGNITSAKIMRDEKGI-SKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPL 389
Query: 168 RTNWSTRK 175
+ RK
Sbjct: 390 YVAIAQRK 397
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,405,878,333
Number of Sequences: 23463169
Number of extensions: 268702353
Number of successful extensions: 987372
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16322
Number of HSP's successfully gapped in prelim test: 8908
Number of HSP's that attempted gapping in prelim test: 875530
Number of HSP's gapped (non-prelim): 79892
length of query: 390
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 246
effective length of database: 8,980,499,031
effective search space: 2209202761626
effective search space used: 2209202761626
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)