Query psy2620
Match_columns 441
No_of_seqs 315 out of 2862
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 20:51:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 4E-68 1.4E-72 529.5 45.7 438 1-440 17-469 (475)
2 2bcg_G Secretory pathway GDP d 100.0 2E-54 6.9E-59 435.3 48.0 436 1-439 8-452 (453)
3 1vg0_A RAB proteins geranylger 100.0 8.9E-54 3E-58 437.2 44.2 423 1-433 5-603 (650)
4 1d5t_A Guanine nucleotide diss 100.0 4.9E-52 1.7E-56 415.5 45.2 427 1-431 3-433 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 2.2E-32 7.4E-37 278.8 28.6 358 5-424 2-404 (501)
6 3ka7_A Oxidoreductase; structu 99.9 2.3E-23 7.8E-28 207.6 33.3 368 5-426 1-425 (425)
7 3nrn_A Uncharacterized protein 99.9 2.5E-23 8.7E-28 207.1 32.0 363 6-424 2-403 (421)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 4.7E-20 1.6E-24 186.4 27.8 269 3-308 15-329 (478)
9 4gde_A UDP-galactopyranose mut 99.9 6.5E-21 2.2E-25 194.4 20.0 306 4-351 10-349 (513)
10 1sez_A Protoporphyrinogen oxid 99.8 2.4E-19 8.2E-24 182.5 24.5 254 1-285 10-305 (504)
11 3i6d_A Protoporphyrinogen oxid 99.8 5.6E-20 1.9E-24 185.2 18.2 332 1-373 1-391 (470)
12 1s3e_A Amine oxidase [flavin-c 99.8 3E-19 1E-23 182.5 22.2 271 1-307 1-304 (520)
13 3nks_A Protoporphyrinogen oxid 99.8 1.5E-19 5E-24 182.7 16.9 283 5-324 3-338 (477)
14 3lov_A Protoporphyrinogen oxid 99.8 1.5E-18 5.2E-23 175.2 22.5 287 1-324 2-335 (475)
15 2vvm_A Monoamine oxidase N; FA 99.8 3E-19 1E-23 181.4 17.4 271 5-307 40-348 (495)
16 2yg5_A Putrescine oxidase; oxi 99.8 8.7E-19 3E-23 175.9 19.0 271 1-307 1-304 (453)
17 4dsg_A UDP-galactopyranose mut 99.7 2.4E-16 8.1E-21 159.2 22.5 373 3-425 8-452 (484)
18 2b9w_A Putative aminooxidase; 99.7 5.7E-17 2E-21 161.2 17.7 247 2-286 4-256 (424)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.7 9.7E-17 3.3E-21 159.8 16.6 265 5-308 2-296 (431)
20 2jae_A L-amino acid oxidase; o 99.7 1.8E-15 6.1E-20 153.3 18.9 284 2-307 9-330 (489)
21 1rsg_A FMS1 protein; FAD bindi 99.6 3.3E-16 1.1E-20 159.7 11.0 258 4-311 8-307 (516)
22 2iid_A L-amino-acid oxidase; f 99.6 9.7E-15 3.3E-19 148.2 20.4 267 3-307 32-334 (498)
23 2e1m_A L-glutamate oxidase; L- 99.6 9.7E-15 3.3E-19 141.4 16.5 240 3-267 43-352 (376)
24 1v0j_A UDP-galactopyranose mut 99.6 6.1E-16 2.1E-20 152.4 3.6 297 1-354 4-315 (399)
25 2bi7_A UDP-galactopyranose mut 99.5 5E-15 1.7E-19 145.0 7.0 228 1-285 1-235 (384)
26 1b37_A Protein (polyamine oxid 99.5 4.4E-14 1.5E-18 142.4 13.5 265 1-311 1-311 (472)
27 3hdq_A UDP-galactopyranose mut 99.5 1.2E-14 4.2E-19 141.8 6.9 259 3-324 28-300 (397)
28 1i8t_A UDP-galactopyranose mut 99.5 2.2E-14 7.4E-19 139.7 6.3 227 4-285 1-232 (367)
29 3dme_A Conserved exported prot 99.5 8.6E-14 3E-18 135.1 9.7 60 231-290 149-211 (369)
30 3dje_A Fructosyl amine: oxygen 99.4 4.9E-13 1.7E-17 133.3 13.5 68 224-291 149-224 (438)
31 3nyc_A D-arginine dehydrogenas 99.4 2.2E-12 7.5E-17 125.8 14.2 66 224-290 143-211 (381)
32 1y56_B Sarcosine oxidase; dehy 99.3 1.2E-11 4E-16 120.9 15.7 60 231-290 148-207 (382)
33 4gut_A Lysine-specific histone 99.3 3E-11 1E-15 127.7 19.1 253 4-310 336-625 (776)
34 3v76_A Flavoprotein; structura 99.3 1.2E-11 4.2E-16 122.0 13.5 64 224-288 124-187 (417)
35 1pj5_A N,N-dimethylglycine oxi 99.3 4.2E-11 1.4E-15 128.8 17.6 60 231-290 150-209 (830)
36 3ps9_A TRNA 5-methylaminomethy 99.3 7.7E-11 2.6E-15 123.9 18.4 67 224-291 406-476 (676)
37 2oln_A NIKD protein; flavoprot 99.3 9.7E-11 3.3E-15 115.0 18.0 58 232-290 153-210 (397)
38 3da1_A Glycerol-3-phosphate de 99.3 3.2E-11 1.1E-15 123.7 14.3 61 231-291 169-235 (561)
39 2z3y_A Lysine-specific histone 99.2 3.9E-10 1.3E-14 118.0 21.3 72 4-96 107-180 (662)
40 3pvc_A TRNA 5-methylaminomethy 99.2 1.6E-10 5.6E-15 121.5 18.3 67 224-291 401-472 (689)
41 2gag_B Heterotetrameric sarcos 99.2 6.1E-11 2.1E-15 116.6 13.7 66 225-290 164-232 (405)
42 2uzz_A N-methyl-L-tryptophan o 99.2 5E-11 1.7E-15 115.9 12.1 60 231-291 148-207 (372)
43 2xag_A Lysine-specific histone 99.2 4.4E-10 1.5E-14 119.7 20.2 72 4-96 278-351 (852)
44 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.3E-10 4.3E-15 111.8 14.4 191 224-425 104-339 (342)
45 4at0_A 3-ketosteroid-delta4-5a 99.2 5.9E-10 2E-14 113.2 19.3 57 232-288 202-264 (510)
46 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.1E-10 3.6E-15 116.7 13.5 58 231-288 133-191 (447)
47 2rgh_A Alpha-glycerophosphate 99.2 2.3E-10 7.7E-15 117.7 16.0 61 231-291 187-253 (571)
48 3cgv_A Geranylgeranyl reductas 99.2 1.4E-10 4.8E-15 113.6 12.7 56 233-288 103-162 (397)
49 2gqf_A Hypothetical protein HI 99.2 1.1E-10 3.7E-15 114.7 11.9 62 226-288 103-168 (401)
50 3ayj_A Pro-enzyme of L-phenyla 99.2 2E-11 6.8E-16 126.7 6.6 80 4-97 56-162 (721)
51 1yvv_A Amine oxidase, flavin-c 99.2 2.4E-10 8.2E-15 109.4 13.5 44 4-47 2-45 (336)
52 3axb_A Putative oxidoreductase 99.1 5.3E-10 1.8E-14 111.6 15.1 60 231-290 180-256 (448)
53 3kkj_A Amine oxidase, flavin-c 99.1 4.4E-11 1.5E-15 110.3 6.6 44 4-47 2-45 (336)
54 3oz2_A Digeranylgeranylglycero 99.1 2.5E-10 8.6E-15 111.5 12.1 56 233-288 103-162 (397)
55 1y0p_A Fumarate reductase flav 99.1 2.6E-09 9E-14 109.9 19.8 57 232-288 255-317 (571)
56 2gf3_A MSOX, monomeric sarcosi 99.1 6.5E-10 2.2E-14 108.6 14.0 58 232-290 150-207 (389)
57 1qo8_A Flavocytochrome C3 fuma 99.1 2E-09 6.9E-14 110.6 18.1 58 231-288 249-312 (566)
58 1ryi_A Glycine oxidase; flavop 99.1 5.9E-11 2E-15 115.8 5.9 66 224-290 153-221 (382)
59 2qcu_A Aerobic glycerol-3-phos 99.1 5.5E-10 1.9E-14 113.2 12.3 60 231-291 148-213 (501)
60 3nlc_A Uncharacterized protein 99.0 1E-09 3.4E-14 111.5 12.7 58 232-289 220-278 (549)
61 2wdq_A Succinate dehydrogenase 99.0 4.5E-09 1.5E-13 108.3 16.5 57 232-288 143-206 (588)
62 2h88_A Succinate dehydrogenase 99.0 4.9E-09 1.7E-13 108.3 15.6 57 232-288 155-217 (621)
63 2bs2_A Quinol-fumarate reducta 99.0 8.5E-09 2.9E-13 107.3 16.6 57 232-288 158-220 (660)
64 3i3l_A Alkylhalidase CMLS; fla 99.0 2.1E-09 7E-14 110.7 11.6 57 232-288 128-188 (591)
65 3atr_A Conserved archaeal prot 99.0 7.3E-09 2.5E-13 103.5 15.3 56 233-288 101-162 (453)
66 3nix_A Flavoprotein/dehydrogen 99.0 5.9E-09 2E-13 103.0 14.4 57 232-288 106-166 (421)
67 1d4d_A Flavocytochrome C fumar 98.9 4.4E-08 1.5E-12 100.7 20.0 58 231-288 254-317 (572)
68 1rp0_A ARA6, thiazole biosynth 98.9 1.1E-08 3.8E-13 95.6 12.5 41 3-43 38-79 (284)
69 2x3n_A Probable FAD-dependent 98.9 1.3E-08 4.6E-13 99.7 13.4 57 232-288 107-166 (399)
70 3lxd_A FAD-dependent pyridine 98.9 7.3E-09 2.5E-13 102.3 11.2 59 231-289 193-252 (415)
71 3rp8_A Flavoprotein monooxygen 98.9 7.4E-09 2.5E-13 101.9 10.7 54 232-288 127-181 (407)
72 2qa1_A PGAE, polyketide oxygen 98.9 1.7E-08 6E-13 101.9 13.6 55 233-288 107-165 (500)
73 3e1t_A Halogenase; flavoprotei 98.8 1.7E-08 5.9E-13 102.4 12.6 57 232-288 111-172 (512)
74 3ihg_A RDME; flavoenzyme, anth 98.8 1.9E-08 6.6E-13 102.7 13.0 57 232-288 120-183 (535)
75 1kf6_A Fumarate reductase flav 98.8 5.7E-08 2E-12 100.2 16.0 57 232-288 134-197 (602)
76 1chu_A Protein (L-aspartate ox 98.8 2.9E-08 9.8E-13 101.2 13.6 57 232-288 138-208 (540)
77 2gmh_A Electron transfer flavo 98.8 6.2E-08 2.1E-12 99.8 14.3 57 232-288 144-217 (584)
78 1k0i_A P-hydroxybenzoate hydro 98.8 2.9E-08 1E-12 97.1 11.4 56 233-288 104-163 (394)
79 2qa2_A CABE, polyketide oxygen 98.8 5.7E-08 2E-12 98.1 13.5 55 233-288 108-166 (499)
80 1jnr_A Adenylylsulfate reducta 98.7 1.2E-07 4E-12 98.8 15.5 56 232-287 151-217 (643)
81 2e5v_A L-aspartate oxidase; ar 98.7 2.5E-07 8.6E-12 92.7 16.8 56 232-288 119-176 (472)
82 2vou_A 2,6-dihydroxypyridine h 98.7 5.1E-08 1.7E-12 95.6 11.0 37 3-39 4-40 (397)
83 3fg2_P Putative rubredoxin red 98.7 1.1E-07 3.7E-12 93.5 13.1 59 231-289 183-242 (404)
84 3t37_A Probable dehydrogenase; 98.7 1.4E-07 4.9E-12 95.9 13.9 44 244-287 223-270 (526)
85 3fmw_A Oxygenase; mithramycin, 98.7 4.8E-08 1.6E-12 100.2 10.1 56 232-288 148-207 (570)
86 3fpz_A Thiazole biosynthetic e 98.7 9.9E-09 3.4E-13 97.9 3.9 42 4-45 65-108 (326)
87 2dkh_A 3-hydroxybenzoate hydro 98.6 9.6E-08 3.3E-12 99.5 11.5 38 3-40 31-69 (639)
88 4gcm_A TRXR, thioredoxin reduc 98.6 1.2E-08 4.2E-13 96.4 4.3 43 1-44 2-45 (312)
89 1coy_A Cholesterol oxidase; ox 98.6 6.8E-08 2.3E-12 97.8 9.7 57 231-287 225-292 (507)
90 4a5l_A Thioredoxin reductase; 98.6 1.5E-08 5E-13 95.9 4.3 38 1-38 1-38 (314)
91 2cdu_A NADPH oxidase; flavoenz 98.6 2.8E-07 9.4E-12 92.0 13.6 59 231-289 190-248 (452)
92 3qvp_A Glucose oxidase; oxidor 98.6 1.6E-07 5.6E-12 96.1 12.1 55 234-288 228-293 (583)
93 3oc4_A Oxidoreductase, pyridin 98.6 1.3E-07 4.4E-12 94.4 11.2 57 231-288 188-244 (452)
94 3ces_A MNMG, tRNA uridine 5-ca 98.6 2.9E-07 1E-11 94.4 13.7 55 233-288 125-181 (651)
95 4fk1_A Putative thioredoxin re 98.6 1.7E-08 5.7E-13 95.3 4.1 41 2-43 4-44 (304)
96 1n4w_A CHOD, cholesterol oxida 98.6 1.2E-07 4E-12 96.0 10.2 57 231-287 220-287 (504)
97 1q1r_A Putidaredoxin reductase 98.6 3.6E-07 1.2E-11 90.6 12.9 58 232-289 191-251 (431)
98 3iwa_A FAD-dependent pyridine 98.6 2.5E-07 8.6E-12 92.8 11.9 59 231-289 201-259 (472)
99 3gyx_A Adenylylsulfate reducta 98.5 5.6E-07 1.9E-11 93.5 13.4 55 232-286 166-231 (662)
100 1c0p_A D-amino acid oxidase; a 98.5 6.5E-08 2.2E-12 93.6 5.2 41 1-41 3-43 (363)
101 2v3a_A Rubredoxin reductase; a 98.5 6.8E-07 2.3E-11 87.1 12.1 57 232-289 187-244 (384)
102 3fim_B ARYL-alcohol oxidase; A 98.5 4.6E-07 1.6E-11 92.5 11.1 38 4-41 2-40 (566)
103 3l8k_A Dihydrolipoyl dehydroge 98.5 4.1E-08 1.4E-12 98.4 3.1 45 1-45 1-45 (466)
104 2jbv_A Choline oxidase; alcoho 98.5 5.9E-08 2E-12 99.1 3.7 55 233-287 209-272 (546)
105 3ab1_A Ferredoxin--NADP reduct 98.5 6.6E-08 2.2E-12 93.4 3.6 58 232-289 202-264 (360)
106 3urh_A Dihydrolipoyl dehydroge 98.4 7E-08 2.4E-12 97.4 3.7 43 2-44 23-65 (491)
107 3c96_A Flavin-containing monoo 98.4 1.1E-07 3.9E-12 93.5 4.6 41 1-41 1-42 (410)
108 2zbw_A Thioredoxin reductase; 98.4 8.5E-08 2.9E-12 91.5 3.5 44 1-44 2-45 (335)
109 4a9w_A Monooxygenase; baeyer-v 98.4 1.3E-07 4.3E-12 90.8 4.0 43 3-45 2-44 (357)
110 3cty_A Thioredoxin reductase; 98.4 1.7E-07 5.7E-12 88.8 4.3 44 1-45 13-56 (319)
111 4dna_A Probable glutathione re 98.4 1.5E-07 5.1E-12 94.3 3.7 58 231-289 210-269 (463)
112 2gv8_A Monooxygenase; FMO, FAD 98.4 2.7E-07 9.1E-12 92.0 5.4 44 2-45 4-49 (447)
113 3o0h_A Glutathione reductase; 98.4 1.5E-07 5E-12 94.8 3.5 57 232-289 232-289 (484)
114 3ef6_A Toluene 1,2-dioxygenase 98.3 1E-06 3.4E-11 86.7 9.1 57 232-289 185-242 (410)
115 2xdo_A TETX2 protein; tetracyc 98.3 3E-07 1E-11 90.1 5.3 41 2-42 24-64 (398)
116 1nhp_A NADH peroxidase; oxidor 98.3 1.2E-06 4.1E-11 87.2 9.7 57 232-289 191-247 (447)
117 2q7v_A Thioredoxin reductase; 98.3 2.4E-07 8.4E-12 87.9 4.2 42 3-45 7-48 (325)
118 3f8d_A Thioredoxin reductase ( 98.3 2.6E-07 9.1E-12 87.3 4.4 40 4-45 15-54 (323)
119 3jsk_A Cypbp37 protein; octame 98.3 2.7E-07 9.1E-12 87.6 4.3 40 4-43 79-120 (344)
120 3itj_A Thioredoxin reductase 1 98.3 2.4E-07 8.2E-12 88.2 4.0 44 3-46 21-68 (338)
121 1v59_A Dihydrolipoamide dehydr 98.3 1.4E-07 4.6E-12 94.9 2.2 44 1-44 2-45 (478)
122 3lzw_A Ferredoxin--NADP reduct 98.3 1.9E-07 6.5E-12 88.7 2.8 41 4-44 7-47 (332)
123 1mo9_A ORF3; nucleotide bindin 98.3 3.4E-07 1.2E-11 93.0 4.7 58 232-289 255-317 (523)
124 1zk7_A HGII, reductase, mercur 98.3 3E-07 1E-11 92.1 4.2 57 232-289 216-272 (467)
125 1ojt_A Surface protein; redox- 98.3 2E-07 6.8E-12 93.8 2.7 44 1-44 3-46 (482)
126 2r9z_A Glutathione amide reduc 98.3 2.8E-07 9.7E-12 92.2 3.7 57 232-289 207-265 (463)
127 1ges_A Glutathione reductase; 98.3 3E-07 1E-11 91.7 3.5 58 232-289 208-266 (450)
128 3pl8_A Pyranose 2-oxidase; sub 98.3 4.4E-07 1.5E-11 94.0 4.8 43 1-43 43-85 (623)
129 3qfa_A Thioredoxin reductase 1 98.3 4E-07 1.4E-11 92.5 4.3 44 2-45 30-81 (519)
130 2gjc_A Thiazole biosynthetic e 98.3 4.3E-07 1.5E-11 85.7 4.2 40 4-43 65-106 (326)
131 3c4n_A Uncharacterized protein 98.3 4.2E-07 1.4E-11 89.3 4.0 58 231-289 171-237 (405)
132 3lad_A Dihydrolipoamide dehydr 98.3 4.7E-07 1.6E-11 90.9 4.4 58 231-288 220-280 (476)
133 2cul_A Glucose-inhibited divis 98.2 4.9E-07 1.7E-11 81.6 3.9 55 234-289 70-126 (232)
134 3alj_A 2-methyl-3-hydroxypyrid 98.2 6.1E-07 2.1E-11 87.3 4.7 53 232-288 107-160 (379)
135 4ap3_A Steroid monooxygenase; 98.2 5E-07 1.7E-11 92.2 4.2 55 3-62 20-74 (549)
136 3ic9_A Dihydrolipoamide dehydr 98.2 4E-07 1.4E-11 91.8 3.4 40 4-44 8-47 (492)
137 1w4x_A Phenylacetone monooxyge 98.2 5.5E-07 1.9E-11 91.9 4.2 43 3-45 15-57 (542)
138 1trb_A Thioredoxin reductase; 98.2 4.6E-07 1.6E-11 85.7 3.2 58 232-289 184-248 (320)
139 2hqm_A GR, grase, glutathione 98.2 4.7E-07 1.6E-11 91.0 3.3 58 232-289 226-286 (479)
140 3dk9_A Grase, GR, glutathione 98.2 4.8E-07 1.6E-11 90.9 3.2 41 3-44 19-59 (478)
141 2qae_A Lipoamide, dihydrolipoy 98.2 5.3E-07 1.8E-11 90.3 3.5 41 4-44 2-42 (468)
142 3d1c_A Flavin-containing putat 98.2 5.5E-07 1.9E-11 87.0 3.5 41 4-45 4-45 (369)
143 3r9u_A Thioredoxin reductase; 98.2 5.7E-07 1.9E-11 84.7 3.3 42 3-45 3-45 (315)
144 1dxl_A Dihydrolipoamide dehydr 98.2 7.2E-07 2.4E-11 89.4 4.2 43 2-44 4-46 (470)
145 2wpf_A Trypanothione reductase 98.2 4.3E-07 1.5E-11 91.6 2.5 58 232-289 235-293 (495)
146 3dgz_A Thioredoxin reductase 2 98.2 8.5E-07 2.9E-11 89.3 4.1 43 3-45 5-55 (488)
147 2a87_A TRXR, TR, thioredoxin r 98.2 7.7E-07 2.6E-11 84.9 3.6 44 1-45 11-54 (335)
148 3ntd_A FAD-dependent pyridine 98.2 9.2E-06 3.1E-10 83.3 11.8 58 232-289 192-268 (565)
149 1zmd_A Dihydrolipoyl dehydroge 98.2 7.1E-07 2.4E-11 89.6 3.2 42 3-44 5-46 (474)
150 3g3e_A D-amino-acid oxidase; F 98.1 6.3E-07 2.2E-11 86.1 2.6 49 231-291 141-189 (351)
151 2yqu_A 2-oxoglutarate dehydrog 98.1 8.1E-07 2.8E-11 88.7 3.4 58 231-289 207-265 (455)
152 3uox_A Otemo; baeyer-villiger 98.1 1.1E-06 3.7E-11 89.6 4.2 43 4-46 9-51 (545)
153 2vdc_G Glutamate synthase [NAD 98.1 1.2E-06 4.1E-11 87.3 4.3 42 3-44 121-162 (456)
154 3fbs_A Oxidoreductase; structu 98.1 1.1E-06 3.7E-11 81.9 3.8 38 4-41 2-39 (297)
155 2bry_A NEDD9 interacting prote 98.1 1.6E-06 5.3E-11 87.5 5.1 40 3-42 91-130 (497)
156 2aqj_A Tryptophan halogenase, 98.1 1.5E-06 5.1E-11 88.6 5.0 56 232-288 165-222 (538)
157 3k30_A Histamine dehydrogenase 98.1 1.1E-06 3.7E-11 92.4 4.0 42 3-44 390-431 (690)
158 1vdc_A NTR, NADPH dependent th 98.1 7.6E-07 2.6E-11 84.7 2.6 43 3-45 7-53 (333)
159 3gwf_A Cyclohexanone monooxyge 98.1 1.1E-06 3.7E-11 89.5 3.8 43 4-46 8-51 (540)
160 2r0c_A REBC; flavin adenine di 98.1 1.4E-06 4.9E-11 89.0 4.6 39 4-42 26-64 (549)
161 2a8x_A Dihydrolipoyl dehydroge 98.1 1.1E-06 3.8E-11 87.9 3.1 56 232-288 212-271 (464)
162 2q0l_A TRXR, thioredoxin reduc 98.1 1.7E-06 5.8E-11 81.4 4.3 40 5-45 2-42 (311)
163 1fec_A Trypanothione reductase 98.1 1.3E-06 4.4E-11 88.0 3.6 58 232-289 231-289 (490)
164 2xve_A Flavin-containing monoo 98.1 2E-06 6.7E-11 86.1 4.5 41 5-45 3-49 (464)
165 3dgh_A TRXR-1, thioredoxin red 98.1 1.8E-06 6.1E-11 86.9 4.2 57 232-288 227-289 (483)
166 3cp8_A TRNA uridine 5-carboxym 98.1 1.6E-06 5.6E-11 88.8 3.8 55 233-288 118-174 (641)
167 2zxi_A TRNA uridine 5-carboxym 98.1 1.9E-06 6.4E-11 88.1 4.0 56 232-288 123-180 (637)
168 2eq6_A Pyruvate dehydrogenase 98.1 1.4E-06 4.7E-11 87.2 3.0 56 232-288 210-271 (464)
169 4hb9_A Similarities with proba 98.0 2.2E-06 7.6E-11 83.8 4.3 34 6-39 3-36 (412)
170 3g5s_A Methylenetetrahydrofola 98.0 3.7E-06 1.3E-10 80.5 5.2 40 5-44 2-41 (443)
171 1ebd_A E3BD, dihydrolipoamide 98.0 2E-06 6.8E-11 85.8 3.5 56 232-288 211-270 (455)
172 1lvl_A Dihydrolipoamide dehydr 98.0 1.7E-06 6E-11 86.3 2.9 41 3-44 4-44 (458)
173 3ihm_A Styrene monooxygenase A 98.0 2.2E-06 7.5E-11 84.8 3.4 34 4-37 22-55 (430)
174 1ju2_A HydroxynitrIle lyase; f 98.0 1.8E-06 6.3E-11 87.8 2.8 38 3-41 25-62 (536)
175 1xdi_A RV3303C-LPDA; reductase 98.0 1.7E-06 5.9E-11 87.3 2.6 57 232-289 223-280 (499)
176 3c4a_A Probable tryptophan hyd 98.0 2.8E-06 9.6E-11 82.6 4.0 34 6-39 2-37 (381)
177 1onf_A GR, grase, glutathione 98.0 2.5E-06 8.7E-11 86.1 3.7 58 232-289 217-276 (500)
178 3q9t_A Choline dehydrogenase a 98.0 3.8E-06 1.3E-10 86.0 4.9 36 3-38 5-41 (577)
179 2e4g_A Tryptophan halogenase; 98.0 3.7E-06 1.3E-10 85.9 4.9 56 232-288 194-252 (550)
180 1fl2_A Alkyl hydroperoxide red 98.0 3.8E-06 1.3E-10 78.9 4.4 39 4-44 1-39 (310)
181 4b1b_A TRXR, thioredoxin reduc 98.0 2.9E-06 1E-10 86.1 3.7 58 231-288 262-319 (542)
182 2ywl_A Thioredoxin reductase r 98.0 3.7E-06 1.3E-10 72.4 3.8 33 5-37 2-34 (180)
183 1o94_A Tmadh, trimethylamine d 98.0 3.8E-06 1.3E-10 88.7 4.6 42 4-45 389-430 (729)
184 2pyx_A Tryptophan halogenase; 98.0 3.3E-06 1.1E-10 85.9 3.9 56 232-288 175-233 (526)
185 1y56_A Hypothetical protein PH 97.9 2.7E-06 9.4E-11 85.7 2.4 41 4-45 108-148 (493)
186 1kdg_A CDH, cellobiose dehydro 97.9 5.1E-06 1.8E-10 84.8 4.3 55 234-288 197-261 (546)
187 3s5w_A L-ornithine 5-monooxyge 97.9 3.6E-06 1.2E-10 84.1 3.0 40 3-42 29-73 (463)
188 1ps9_A 2,4-dienoyl-COA reducta 97.9 7.1E-06 2.4E-10 85.9 5.0 41 4-44 373-413 (671)
189 2weu_A Tryptophan 5-halogenase 97.9 4.1E-06 1.4E-10 84.8 2.9 56 232-288 173-230 (511)
190 2gag_A Heterotetrameric sarcos 97.9 4.2E-06 1.4E-10 91.0 3.1 41 4-44 128-168 (965)
191 1lqt_A FPRA; NADP+ derivative, 97.8 5.9E-06 2E-10 82.3 3.1 41 4-44 3-50 (456)
192 1hyu_A AHPF, alkyl hydroperoxi 97.8 1E-05 3.6E-10 82.0 4.4 40 3-44 211-250 (521)
193 3kd9_A Coenzyme A disulfide re 97.8 1.1E-05 3.9E-10 80.1 4.2 56 232-289 190-245 (449)
194 2x8g_A Thioredoxin glutathione 97.8 9.7E-06 3.3E-10 83.7 3.8 41 3-43 106-154 (598)
195 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.3E-10 87.9 4.5 40 4-43 187-227 (1025)
196 1pn0_A Phenol 2-monooxygenase; 97.8 1.3E-05 4.4E-10 83.7 4.3 36 4-39 8-48 (665)
197 1cjc_A Protein (adrenodoxin re 97.7 1.7E-05 5.7E-10 79.1 3.6 42 3-44 5-48 (460)
198 3sx6_A Sulfide-quinone reducta 97.7 2.1E-05 7.1E-10 77.9 4.0 39 1-39 1-42 (437)
199 1m6i_A Programmed cell death p 97.7 2.1E-05 7.3E-10 79.1 4.1 57 232-289 226-283 (493)
200 3h28_A Sulfide-quinone reducta 97.7 1.7E-05 6E-10 78.3 3.3 39 5-43 3-43 (430)
201 3ics_A Coenzyme A-disulfide re 97.6 2.9E-05 1E-09 80.0 4.2 54 232-288 228-282 (588)
202 2gqw_A Ferredoxin reductase; f 97.6 3.4E-05 1.1E-09 75.7 4.2 53 232-289 187-240 (408)
203 3h8l_A NADH oxidase; membrane 97.6 2.3E-05 7.9E-10 76.8 2.4 53 232-289 218-271 (409)
204 2bc0_A NADH oxidase; flavoprot 97.6 3.5E-05 1.2E-09 77.5 3.6 57 232-289 236-292 (490)
205 1gpe_A Protein (glucose oxidas 97.5 4.4E-05 1.5E-09 78.4 4.4 37 3-39 23-60 (587)
206 3cgb_A Pyridine nucleotide-dis 97.5 4.9E-05 1.7E-09 76.2 4.0 57 232-289 227-283 (480)
207 1xhc_A NADH oxidase /nitrite r 97.5 6.6E-05 2.3E-09 72.5 4.6 52 232-289 183-235 (367)
208 3klj_A NAD(FAD)-dependent dehy 97.2 0.00029 9.8E-09 68.4 5.1 38 4-41 9-46 (385)
209 4g6h_A Rotenone-insensitive NA 97.1 0.00026 8.9E-09 71.2 4.3 56 232-288 272-332 (502)
210 4eqs_A Coenzyme A disulfide re 97.0 0.00031 1.1E-08 69.4 3.9 52 232-288 188-240 (437)
211 3hyw_A Sulfide-quinone reducta 97.0 0.00028 9.7E-09 69.6 3.3 57 230-288 198-256 (430)
212 3vrd_B FCCB subunit, flavocyto 97.0 0.00029 9.9E-09 68.7 3.0 46 242-288 212-258 (401)
213 4b63_A L-ornithine N5 monooxyg 96.9 0.00011 3.7E-09 74.1 -0.6 38 3-40 38-75 (501)
214 1nhp_A NADH peroxidase; oxidor 95.8 0.0071 2.4E-07 59.7 4.8 38 4-41 149-186 (447)
215 4gcm_A TRXR, thioredoxin reduc 95.7 0.0083 2.8E-07 55.9 4.6 36 6-41 147-182 (312)
216 3klj_A NAD(FAD)-dependent dehy 95.7 0.0065 2.2E-07 58.8 3.9 38 5-42 147-184 (385)
217 1lss_A TRK system potassium up 95.6 0.0094 3.2E-07 48.1 4.0 33 5-37 5-37 (140)
218 2g1u_A Hypothetical protein TM 95.6 0.0086 3E-07 49.7 3.8 33 5-37 20-52 (155)
219 3llv_A Exopolyphosphatase-rela 95.5 0.011 3.8E-07 48.0 4.1 33 5-37 7-39 (141)
220 3fwz_A Inner membrane protein 95.5 0.01 3.6E-07 48.3 3.9 33 5-37 8-40 (140)
221 1id1_A Putative potassium chan 95.4 0.014 4.7E-07 48.3 4.5 34 4-37 3-36 (153)
222 1lvl_A Dihydrolipoamide dehydr 95.2 0.011 3.7E-07 58.6 3.8 37 5-41 172-208 (458)
223 2eq6_A Pyruvate dehydrogenase 95.2 0.013 4.3E-07 58.2 4.2 37 5-41 170-206 (464)
224 4e12_A Diketoreductase; oxidor 95.2 0.016 5.4E-07 53.5 4.6 37 1-37 1-37 (283)
225 1xhc_A NADH oxidase /nitrite r 95.1 0.014 4.8E-07 56.0 4.2 37 5-41 144-180 (367)
226 1ebd_A E3BD, dihydrolipoamide 95.1 0.014 4.8E-07 57.7 4.2 37 5-41 171-207 (455)
227 2v3a_A Rubredoxin reductase; a 95.1 0.016 5.4E-07 55.9 4.4 39 4-42 145-183 (384)
228 2yqu_A 2-oxoglutarate dehydrog 95.1 0.015 5E-07 57.6 4.2 36 5-40 168-203 (455)
229 4a5l_A Thioredoxin reductase; 95.0 0.018 6E-07 53.6 4.5 35 5-39 153-187 (314)
230 1v59_A Dihydrolipoamide dehydr 95.0 0.017 5.8E-07 57.5 4.4 37 5-41 184-220 (478)
231 3ic5_A Putative saccharopine d 94.7 0.023 7.9E-07 44.2 3.8 32 5-36 6-38 (118)
232 1ges_A Glutathione reductase; 94.7 0.021 7.1E-07 56.4 4.2 36 5-40 168-203 (450)
233 2cul_A Glucose-inhibited divis 94.7 0.092 3.1E-06 46.6 8.1 36 1-37 1-36 (232)
234 2gqw_A Ferredoxin reductase; f 94.6 0.025 8.4E-07 55.1 4.4 37 5-41 146-182 (408)
235 1bg6_A N-(1-D-carboxylethyl)-L 94.5 0.025 8.7E-07 53.8 4.1 36 1-36 1-36 (359)
236 2r9z_A Glutathione amide reduc 94.4 0.027 9.2E-07 55.8 4.2 36 5-40 167-202 (463)
237 3c4n_A Uncharacterized protein 94.3 0.021 7.2E-07 55.5 3.2 39 4-42 36-76 (405)
238 3c85_A Putative glutathione-re 94.2 0.027 9.4E-07 48.0 3.3 32 6-37 41-73 (183)
239 2bc0_A NADH oxidase; flavoprot 94.2 0.032 1.1E-06 55.7 4.2 37 5-41 195-231 (490)
240 2hmt_A YUAA protein; RCK, KTN, 94.1 0.03 1E-06 45.2 3.3 32 5-36 7-38 (144)
241 3qha_A Putative oxidoreductase 94.1 0.04 1.4E-06 51.1 4.4 35 4-38 15-49 (296)
242 1zmd_A Dihydrolipoyl dehydroge 94.1 0.037 1.3E-06 55.0 4.4 37 5-41 179-215 (474)
243 1ojt_A Surface protein; redox- 94.1 0.029 9.9E-07 55.9 3.7 37 5-41 186-222 (482)
244 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.042 1.4E-06 51.0 4.5 32 6-37 17-48 (302)
245 3ic9_A Dihydrolipoamide dehydr 94.0 0.039 1.4E-06 55.1 4.6 38 5-42 175-212 (492)
246 3ado_A Lambda-crystallin; L-gu 94.0 0.033 1.1E-06 52.0 3.7 33 5-37 7-39 (319)
247 1q1r_A Putidaredoxin reductase 94.0 0.041 1.4E-06 54.0 4.5 37 5-41 150-186 (431)
248 2a8x_A Dihydrolipoyl dehydroge 94.0 0.037 1.3E-06 54.8 4.2 37 5-41 172-208 (464)
249 2q0l_A TRXR, thioredoxin reduc 93.9 0.046 1.6E-06 50.6 4.5 35 5-39 144-178 (311)
250 3ef6_A Toluene 1,2-dioxygenase 93.8 0.041 1.4E-06 53.5 4.2 37 5-41 144-180 (410)
251 1onf_A GR, grase, glutathione 93.7 0.047 1.6E-06 54.7 4.4 37 5-41 177-213 (500)
252 3d1c_A Flavin-containing putat 93.7 0.04 1.4E-06 52.4 3.8 33 6-38 168-200 (369)
253 3kd9_A Coenzyme A disulfide re 93.7 0.05 1.7E-06 53.6 4.5 38 5-42 149-186 (449)
254 2ewd_A Lactate dehydrogenase,; 93.6 0.047 1.6E-06 51.1 4.0 37 1-37 1-38 (317)
255 2hqm_A GR, grase, glutathione 93.6 0.046 1.6E-06 54.4 4.2 36 5-40 186-221 (479)
256 3i83_A 2-dehydropantoate 2-red 93.6 0.051 1.7E-06 51.0 4.2 33 5-37 3-35 (320)
257 1fl2_A Alkyl hydroperoxide red 93.6 0.052 1.8E-06 50.2 4.2 35 5-39 145-179 (310)
258 3l4b_C TRKA K+ channel protien 93.6 0.039 1.3E-06 48.5 3.2 32 6-37 2-33 (218)
259 1dxl_A Dihydrolipoamide dehydr 93.5 0.032 1.1E-06 55.4 2.8 37 5-41 178-214 (470)
260 4eqs_A Coenzyme A disulfide re 93.5 0.043 1.5E-06 53.9 3.7 37 5-41 148-184 (437)
261 3gwf_A Cyclohexanone monooxyge 93.5 0.058 2E-06 54.6 4.7 34 5-38 179-212 (540)
262 1vdc_A NTR, NADPH dependent th 93.5 0.06 2.1E-06 50.4 4.6 35 5-39 160-194 (333)
263 2q7v_A Thioredoxin reductase; 93.5 0.062 2.1E-06 50.1 4.6 35 5-39 153-187 (325)
264 2a87_A TRXR, TR, thioredoxin r 93.3 0.065 2.2E-06 50.3 4.6 35 5-39 156-190 (335)
265 2zbw_A Thioredoxin reductase; 93.3 0.066 2.2E-06 50.1 4.6 34 5-38 153-186 (335)
266 3hn2_A 2-dehydropantoate 2-red 93.3 0.054 1.8E-06 50.6 3.9 33 5-37 3-35 (312)
267 2cdu_A NADPH oxidase; flavoenz 93.3 0.06 2E-06 53.1 4.4 37 5-41 150-186 (452)
268 1t2d_A LDH-P, L-lactate dehydr 93.3 0.067 2.3E-06 50.2 4.5 37 1-37 1-38 (322)
269 1trb_A Thioredoxin reductase; 93.3 0.067 2.3E-06 49.7 4.5 36 5-40 146-181 (320)
270 3uox_A Otemo; baeyer-villiger 93.2 0.063 2.1E-06 54.4 4.4 35 5-39 186-220 (545)
271 2qae_A Lipoamide, dihydrolipoy 93.2 0.06 2E-06 53.3 4.2 37 5-41 175-211 (468)
272 2dpo_A L-gulonate 3-dehydrogen 93.1 0.059 2E-06 50.5 3.8 33 5-37 7-39 (319)
273 3lxd_A FAD-dependent pyridine 93.1 0.065 2.2E-06 52.1 4.2 37 5-41 153-189 (415)
274 3lk7_A UDP-N-acetylmuramoylala 93.1 0.062 2.1E-06 53.0 4.0 33 5-37 10-42 (451)
275 3fg2_P Putative rubredoxin red 93.1 0.073 2.5E-06 51.6 4.5 38 5-42 143-180 (404)
276 2y0c_A BCEC, UDP-glucose dehyd 93.1 0.059 2E-06 53.5 3.9 32 5-36 9-40 (478)
277 1xdi_A RV3303C-LPDA; reductase 93.0 0.17 5.7E-06 50.6 7.2 41 4-45 2-45 (499)
278 2gv8_A Monooxygenase; FMO, FAD 93.0 0.07 2.4E-06 52.5 4.4 35 5-39 213-248 (447)
279 3g79_A NDP-N-acetyl-D-galactos 93.0 0.06 2E-06 53.3 3.8 34 5-38 19-54 (478)
280 2xve_A Flavin-containing monoo 93.0 0.06 2.1E-06 53.3 3.9 35 5-39 198-232 (464)
281 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.088 3E-06 42.8 4.2 32 5-36 22-53 (144)
282 1ks9_A KPA reductase;, 2-dehyd 92.9 0.072 2.5E-06 48.8 4.1 33 6-38 2-34 (291)
283 3cty_A Thioredoxin reductase; 92.9 0.08 2.7E-06 49.2 4.4 35 5-39 156-190 (319)
284 4e21_A 6-phosphogluconate dehy 92.9 0.073 2.5E-06 50.7 4.1 37 1-37 19-55 (358)
285 3ghy_A Ketopantoate reductase 92.9 0.074 2.5E-06 50.2 4.1 35 1-36 1-35 (335)
286 4a7p_A UDP-glucose dehydrogena 92.8 0.074 2.5E-06 52.2 4.2 35 4-38 8-42 (446)
287 2x5o_A UDP-N-acetylmuramoylala 92.8 0.06 2E-06 52.9 3.5 36 5-40 6-41 (439)
288 3vtf_A UDP-glucose 6-dehydroge 92.8 0.068 2.3E-06 52.2 3.8 34 4-37 21-54 (444)
289 3gg2_A Sugar dehydrogenase, UD 92.8 0.076 2.6E-06 52.3 4.2 33 5-37 3-35 (450)
290 3ntd_A FAD-dependent pyridine 92.7 0.075 2.6E-06 53.9 4.2 37 5-41 152-188 (565)
291 3dfz_A SIRC, precorrin-2 dehyd 92.6 0.11 3.6E-06 45.9 4.5 33 4-36 31-63 (223)
292 2raf_A Putative dinucleotide-b 92.6 0.089 3E-06 45.9 4.0 34 5-38 20-53 (209)
293 4ap3_A Steroid monooxygenase; 92.6 0.065 2.2E-06 54.3 3.5 34 5-38 192-225 (549)
294 3urh_A Dihydrolipoyl dehydroge 92.6 0.068 2.3E-06 53.3 3.6 37 5-41 199-235 (491)
295 2ew2_A 2-dehydropantoate 2-red 92.6 0.082 2.8E-06 49.1 4.0 33 5-37 4-36 (316)
296 2ywl_A Thioredoxin reductase r 92.6 0.25 8.5E-06 41.5 6.7 56 232-289 56-111 (180)
297 1kyq_A Met8P, siroheme biosynt 92.5 0.054 1.8E-06 49.4 2.5 34 4-37 13-46 (274)
298 3l8k_A Dihydrolipoyl dehydroge 92.5 0.084 2.9E-06 52.2 4.2 37 5-41 173-209 (466)
299 3itj_A Thioredoxin reductase 1 92.5 0.099 3.4E-06 48.8 4.5 35 5-39 174-208 (338)
300 3dk9_A Grase, GR, glutathione 92.5 0.084 2.9E-06 52.4 4.2 36 5-40 188-223 (478)
301 1zk7_A HGII, reductase, mercur 92.5 0.33 1.1E-05 47.9 8.4 43 1-44 1-43 (467)
302 2weu_A Tryptophan 5-halogenase 92.4 0.24 8.1E-06 49.5 7.4 35 4-38 2-39 (511)
303 3oc4_A Oxidoreductase, pyridin 92.4 0.091 3.1E-06 51.7 4.2 37 5-41 148-184 (452)
304 1fec_A Trypanothione reductase 92.3 0.21 7.1E-06 49.8 6.8 42 3-44 2-52 (490)
305 4dna_A Probable glutathione re 92.3 0.21 7.2E-06 49.2 6.8 43 1-44 1-44 (463)
306 3cky_A 2-hydroxymethyl glutara 92.3 0.095 3.3E-06 48.4 4.1 37 1-37 1-37 (301)
307 1evy_A Glycerol-3-phosphate de 92.3 0.079 2.7E-06 50.6 3.5 31 6-36 17-47 (366)
308 4g65_A TRK system potassium up 92.3 0.088 3E-06 52.0 3.9 33 5-37 4-36 (461)
309 3o0h_A Glutathione reductase; 92.2 0.23 8E-06 49.2 7.0 40 4-44 26-65 (484)
310 3k96_A Glycerol-3-phosphate de 92.2 0.11 3.9E-06 49.4 4.4 32 5-36 30-61 (356)
311 2wpf_A Trypanothione reductase 92.1 0.24 8.3E-06 49.4 7.0 44 1-44 4-56 (495)
312 1m6i_A Programmed cell death p 92.1 0.31 1E-05 48.6 7.7 40 1-40 8-49 (493)
313 2q3e_A UDP-glucose 6-dehydroge 92.1 0.092 3.1E-06 52.0 3.8 36 1-36 2-39 (467)
314 3s5w_A L-ornithine 5-monooxyge 92.0 0.079 2.7E-06 52.2 3.3 35 4-38 227-263 (463)
315 3doj_A AT3G25530, dehydrogenas 92.0 0.12 4.1E-06 48.1 4.4 34 5-38 22-55 (310)
316 2x8g_A Thioredoxin glutathione 92.0 0.094 3.2E-06 53.7 3.9 32 5-36 287-318 (598)
317 2zxi_A TRNA uridine 5-carboxym 91.9 0.32 1.1E-05 49.7 7.6 38 3-40 26-64 (637)
318 4dio_A NAD(P) transhydrogenase 91.9 0.11 3.9E-06 49.9 4.1 33 5-37 191-223 (405)
319 4a9w_A Monooxygenase; baeyer-v 91.9 0.37 1.3E-05 45.1 7.7 56 232-287 76-131 (357)
320 1mv8_A GMD, GDP-mannose 6-dehy 91.8 0.1 3.5E-06 51.2 3.8 31 6-36 2-32 (436)
321 3g17_A Similar to 2-dehydropan 91.8 0.079 2.7E-06 48.9 2.8 33 5-37 3-35 (294)
322 2e4g_A Tryptophan halogenase; 91.8 0.31 1.1E-05 49.2 7.5 36 3-38 24-62 (550)
323 3mog_A Probable 3-hydroxybutyr 91.7 0.12 4.2E-06 51.3 4.2 34 4-37 5-38 (483)
324 3tl2_A Malate dehydrogenase; c 91.7 0.14 4.7E-06 47.8 4.3 33 4-36 8-41 (315)
325 1lld_A L-lactate dehydrogenase 91.7 0.12 4E-06 48.3 3.9 33 5-37 8-42 (319)
326 3hwr_A 2-dehydropantoate 2-red 91.5 0.13 4.4E-06 48.1 4.0 31 5-36 20-50 (318)
327 3cgb_A Pyridine nucleotide-dis 91.5 0.43 1.5E-05 47.3 8.0 39 4-42 36-76 (480)
328 3ics_A Coenzyme A-disulfide re 91.5 0.14 4.8E-06 52.2 4.5 38 5-42 188-225 (588)
329 1hyu_A AHPF, alkyl hydroperoxi 91.4 0.1 3.6E-06 52.4 3.5 36 5-40 356-391 (521)
330 3k6j_A Protein F01G10.3, confi 91.4 0.13 4.5E-06 50.5 4.0 34 5-38 55-88 (460)
331 1zcj_A Peroxisomal bifunctiona 91.4 0.14 4.7E-06 50.7 4.2 32 6-37 39-70 (463)
332 1z82_A Glycerol-3-phosphate de 91.4 0.14 4.8E-06 48.2 4.1 33 4-36 14-46 (335)
333 1pzg_A LDH, lactate dehydrogen 91.4 0.14 4.8E-06 48.1 4.1 33 5-37 10-43 (331)
334 4huj_A Uncharacterized protein 91.2 0.081 2.8E-06 46.6 2.0 33 5-37 24-57 (220)
335 1mo9_A ORF3; nucleotide bindin 91.2 0.37 1.3E-05 48.4 7.2 44 1-44 40-83 (523)
336 1zej_A HBD-9, 3-hydroxyacyl-CO 91.1 0.16 5.6E-06 46.7 4.2 32 5-37 13-44 (293)
337 2uyy_A N-PAC protein; long-cha 91.1 0.17 5.9E-06 47.1 4.4 33 5-37 31-63 (316)
338 3ojo_A CAP5O; rossmann fold, c 91.1 0.12 4.2E-06 50.3 3.4 33 5-37 12-44 (431)
339 3f8d_A Thioredoxin reductase ( 91.1 0.15 5.2E-06 47.1 4.0 37 5-41 155-191 (323)
340 3p2y_A Alanine dehydrogenase/p 91.0 0.12 4.2E-06 49.2 3.3 33 5-37 185-217 (381)
341 3ego_A Probable 2-dehydropanto 91.0 0.17 5.9E-06 47.0 4.3 32 5-37 3-34 (307)
342 3pid_A UDP-glucose 6-dehydroge 90.9 0.17 5.9E-06 49.2 4.3 32 5-37 37-68 (432)
343 3dgz_A Thioredoxin reductase 2 90.9 0.17 6E-06 50.3 4.5 33 5-37 186-218 (488)
344 3r9u_A Thioredoxin reductase; 90.9 0.18 6.1E-06 46.4 4.2 35 5-39 148-182 (315)
345 2hjr_A Malate dehydrogenase; m 90.9 0.17 5.8E-06 47.6 4.0 33 5-37 15-48 (328)
346 3dhn_A NAD-dependent epimerase 90.8 0.15 5.1E-06 44.7 3.5 37 1-37 1-38 (227)
347 2vdc_G Glutamate synthase [NAD 90.8 0.16 5.4E-06 50.1 4.0 35 5-39 265-300 (456)
348 3qfa_A Thioredoxin reductase 1 90.8 0.18 6.2E-06 50.6 4.5 32 5-36 211-242 (519)
349 3pef_A 6-phosphogluconate dehy 90.7 0.16 5.5E-06 46.6 3.7 33 6-38 3-35 (287)
350 2qyt_A 2-dehydropantoate 2-red 90.7 0.12 4.2E-06 48.0 3.0 31 6-36 10-46 (317)
351 3lzw_A Ferredoxin--NADP reduct 90.7 0.2 7E-06 46.4 4.5 35 5-39 155-189 (332)
352 3ius_A Uncharacterized conserv 90.7 0.19 6.6E-06 45.7 4.3 33 5-37 6-38 (286)
353 1dlj_A UDP-glucose dehydrogena 90.7 0.17 6E-06 48.9 4.1 31 6-37 2-32 (402)
354 2aef_A Calcium-gated potassium 90.7 0.13 4.4E-06 45.6 2.9 32 5-37 10-41 (234)
355 3l6d_A Putative oxidoreductase 90.7 0.21 7.3E-06 46.3 4.5 33 5-37 10-42 (306)
356 1jay_A Coenzyme F420H2:NADP+ o 90.6 0.2 6.7E-06 43.6 4.1 31 6-36 2-33 (212)
357 2v6b_A L-LDH, L-lactate dehydr 90.6 0.18 6.1E-06 46.8 3.9 32 6-37 2-35 (304)
358 3l9w_A Glutathione-regulated p 90.5 0.18 6.2E-06 49.0 4.0 33 5-37 5-37 (413)
359 2vns_A Metalloreductase steap3 90.5 0.2 6.8E-06 43.9 4.0 32 5-36 29-60 (215)
360 3eag_A UDP-N-acetylmuramate:L- 90.5 0.21 7E-06 46.9 4.3 34 5-38 5-39 (326)
361 3fbs_A Oxidoreductase; structu 90.5 0.21 7.3E-06 45.4 4.4 33 5-38 142-174 (297)
362 3g0o_A 3-hydroxyisobutyrate de 90.5 0.19 6.6E-06 46.5 4.1 33 5-37 8-40 (303)
363 3iwa_A FAD-dependent pyridine 90.4 0.16 5.4E-06 50.3 3.7 37 5-41 160-197 (472)
364 3dtt_A NADP oxidoreductase; st 90.4 0.21 7.1E-06 44.7 4.1 33 5-37 20-52 (245)
365 3ab1_A Ferredoxin--NADP reduct 90.3 0.64 2.2E-05 43.8 7.7 44 1-44 11-54 (360)
366 2izz_A Pyrroline-5-carboxylate 90.3 0.19 6.6E-06 47.0 4.0 36 2-37 20-59 (322)
367 1txg_A Glycerol-3-phosphate de 90.1 0.16 5.6E-06 47.5 3.3 30 6-35 2-31 (335)
368 4dll_A 2-hydroxy-3-oxopropiona 90.0 0.24 8.1E-06 46.3 4.3 33 5-37 32-64 (320)
369 1jw9_B Molybdopterin biosynthe 90.0 0.18 6.2E-06 45.3 3.3 33 5-37 32-65 (249)
370 3pdu_A 3-hydroxyisobutyrate de 90.0 0.16 5.5E-06 46.6 3.0 33 6-38 3-35 (287)
371 3gpi_A NAD-dependent epimerase 89.9 0.25 8.6E-06 45.0 4.3 33 5-37 4-36 (286)
372 1y6j_A L-lactate dehydrogenase 89.9 0.25 8.5E-06 46.2 4.2 34 4-37 7-42 (318)
373 3c24_A Putative oxidoreductase 89.8 0.23 8E-06 45.5 4.0 32 6-37 13-45 (286)
374 3dgh_A TRXR-1, thioredoxin red 89.8 0.25 8.6E-06 49.0 4.5 33 5-37 188-220 (483)
375 2pv7_A T-protein [includes: ch 89.7 0.25 8.7E-06 45.6 4.2 32 6-37 23-55 (298)
376 3cp8_A TRNA uridine 5-carboxym 89.6 0.72 2.5E-05 47.2 7.7 39 3-41 20-59 (641)
377 2h78_A Hibadh, 3-hydroxyisobut 89.6 0.25 8.5E-06 45.7 4.0 33 5-37 4-36 (302)
378 1nyt_A Shikimate 5-dehydrogena 89.6 0.26 8.7E-06 44.9 4.0 32 5-36 120-151 (271)
379 2aqj_A Tryptophan halogenase, 89.5 0.63 2.1E-05 46.8 7.2 39 2-40 3-44 (538)
380 1x13_A NAD(P) transhydrogenase 89.4 0.23 8E-06 48.0 3.8 33 5-37 173-205 (401)
381 2a9f_A Putative malic enzyme ( 89.4 0.23 7.8E-06 47.4 3.6 34 4-37 188-222 (398)
382 2o3j_A UDP-glucose 6-dehydroge 89.3 0.21 7.3E-06 49.5 3.5 31 6-36 11-43 (481)
383 1cjc_A Protein (adrenodoxin re 89.3 0.27 9.4E-06 48.5 4.3 45 245-289 270-334 (460)
384 3alj_A 2-methyl-3-hydroxypyrid 89.3 0.78 2.7E-05 43.6 7.5 38 4-41 11-48 (379)
385 1guz_A Malate dehydrogenase; o 89.3 0.27 9.4E-06 45.7 4.1 32 6-37 2-35 (310)
386 2zyd_A 6-phosphogluconate dehy 89.0 0.29 1E-05 48.5 4.3 33 4-36 15-47 (480)
387 1ur5_A Malate dehydrogenase; o 89.0 0.32 1.1E-05 45.2 4.3 33 5-37 3-36 (309)
388 1edz_A 5,10-methylenetetrahydr 89.0 0.3 1E-05 45.4 4.0 32 5-36 178-210 (320)
389 1l7d_A Nicotinamide nucleotide 89.0 0.28 9.6E-06 47.1 4.0 33 5-37 173-205 (384)
390 4ezb_A Uncharacterized conserv 89.0 0.26 8.7E-06 46.0 3.6 33 5-37 25-58 (317)
391 3gvi_A Malate dehydrogenase; N 88.9 0.33 1.1E-05 45.4 4.3 34 4-37 7-41 (324)
392 1pjc_A Protein (L-alanine dehy 88.9 0.28 9.7E-06 46.7 4.0 33 5-37 168-200 (361)
393 3qsg_A NAD-binding phosphogluc 88.8 0.25 8.4E-06 46.0 3.4 32 5-36 25-57 (312)
394 1x0v_A GPD-C, GPDH-C, glycerol 88.8 0.18 6.3E-06 47.7 2.5 34 5-38 9-49 (354)
395 2pyx_A Tryptophan halogenase; 88.8 0.92 3.2E-05 45.4 7.9 37 3-39 6-54 (526)
396 2eez_A Alanine dehydrogenase; 88.7 0.3 1E-05 46.7 4.0 33 5-37 167-199 (369)
397 1vl6_A Malate oxidoreductase; 88.6 0.28 9.6E-06 46.7 3.6 33 4-36 192-225 (388)
398 3c7a_A Octopine dehydrogenase; 88.5 0.24 8.4E-06 47.9 3.2 29 6-34 4-33 (404)
399 1hdo_A Biliverdin IX beta redu 88.4 0.38 1.3E-05 41.1 4.2 36 1-37 1-37 (206)
400 1o94_A Tmadh, trimethylamine d 88.4 0.28 9.7E-06 51.4 3.9 36 5-41 529-566 (729)
401 2gag_A Heterotetrameric sarcos 88.3 0.22 7.6E-06 54.0 3.1 37 5-41 285-321 (965)
402 2wtb_A MFP2, fatty acid multif 88.3 0.31 1.1E-05 50.9 4.1 32 6-37 314-345 (725)
403 2f1k_A Prephenate dehydrogenas 88.2 0.36 1.2E-05 43.9 4.0 32 6-37 2-33 (279)
404 3phh_A Shikimate dehydrogenase 88.2 0.39 1.3E-05 43.5 4.2 33 5-37 119-151 (269)
405 2gf2_A Hibadh, 3-hydroxyisobut 88.1 0.35 1.2E-05 44.4 3.9 32 6-37 2-33 (296)
406 4gbj_A 6-phosphogluconate dehy 88.1 0.31 1.1E-05 45.0 3.6 32 6-37 7-38 (297)
407 3d0o_A L-LDH 1, L-lactate dehy 87.9 0.35 1.2E-05 45.1 3.8 34 3-36 5-40 (317)
408 1yqg_A Pyrroline-5-carboxylate 87.9 0.32 1.1E-05 43.8 3.4 32 6-37 2-34 (263)
409 3pqe_A L-LDH, L-lactate dehydr 87.9 0.37 1.3E-05 45.1 3.9 33 4-36 5-39 (326)
410 1a5z_A L-lactate dehydrogenase 87.9 0.3 1E-05 45.6 3.3 32 6-37 2-35 (319)
411 3ew7_A LMO0794 protein; Q8Y8U8 87.9 0.41 1.4E-05 41.5 4.0 32 6-37 2-34 (221)
412 1p77_A Shikimate 5-dehydrogena 87.8 0.3 1E-05 44.5 3.1 32 5-36 120-151 (272)
413 1vpd_A Tartronate semialdehyde 87.8 0.36 1.2E-05 44.4 3.8 32 6-37 7-38 (299)
414 2rcy_A Pyrroline carboxylate r 87.8 0.36 1.2E-05 43.4 3.7 34 5-38 5-42 (262)
415 1pjq_A CYSG, siroheme synthase 87.7 0.36 1.2E-05 47.6 3.9 32 5-36 13-44 (457)
416 3dfu_A Uncharacterized protein 87.7 0.19 6.6E-06 44.4 1.7 32 5-36 7-38 (232)
417 3p7m_A Malate dehydrogenase; p 87.6 0.48 1.6E-05 44.3 4.5 34 4-37 5-39 (321)
418 1qyc_A Phenylcoumaran benzylic 87.6 0.45 1.5E-05 43.7 4.4 37 1-37 1-38 (308)
419 2ahr_A Putative pyrroline carb 87.5 0.48 1.7E-05 42.5 4.4 33 5-37 4-36 (259)
420 4gwg_A 6-phosphogluconate dehy 87.4 0.44 1.5E-05 47.1 4.3 34 4-37 4-37 (484)
421 3lad_A Dihydrolipoamide dehydr 87.4 1.2 4.1E-05 43.9 7.6 40 3-42 2-41 (476)
422 1hyh_A L-hicdh, L-2-hydroxyiso 87.4 0.35 1.2E-05 44.9 3.4 32 6-37 3-36 (309)
423 2iz1_A 6-phosphogluconate dehy 87.3 0.45 1.5E-05 47.1 4.4 33 4-36 5-37 (474)
424 1gte_A Dihydropyrimidine dehyd 87.3 0.36 1.2E-05 52.7 4.0 33 6-38 334-367 (1025)
425 3ggo_A Prephenate dehydrogenas 87.3 0.43 1.5E-05 44.4 4.0 33 5-37 34-68 (314)
426 1yj8_A Glycerol-3-phosphate de 87.3 0.28 9.6E-06 46.9 2.8 33 6-38 23-62 (375)
427 2egg_A AROE, shikimate 5-dehyd 87.3 0.47 1.6E-05 43.8 4.2 32 5-36 142-174 (297)
428 2vhw_A Alanine dehydrogenase; 87.1 0.42 1.4E-05 45.7 4.0 33 5-37 169-201 (377)
429 2cvz_A Dehydrogenase, 3-hydrox 87.1 0.45 1.6E-05 43.4 4.0 31 6-37 3-33 (289)
430 3ktd_A Prephenate dehydrogenas 87.1 0.43 1.5E-05 45.0 3.9 33 5-37 9-41 (341)
431 3h2s_A Putative NADH-flavin re 87.0 0.47 1.6E-05 41.2 3.9 31 6-36 2-33 (224)
432 1nvt_A Shikimate 5'-dehydrogen 87.0 0.49 1.7E-05 43.4 4.2 31 5-36 129-159 (287)
433 3vps_A TUNA, NAD-dependent epi 87.0 0.45 1.5E-05 43.9 4.0 35 4-38 7-42 (321)
434 2p4q_A 6-phosphogluconate dehy 86.9 0.48 1.6E-05 47.2 4.3 33 5-37 11-43 (497)
435 2g5c_A Prephenate dehydrogenas 86.9 0.47 1.6E-05 43.2 4.0 32 6-37 3-36 (281)
436 3e8x_A Putative NAD-dependent 86.9 0.45 1.6E-05 41.9 3.8 33 5-37 22-55 (236)
437 2pgd_A 6-phosphogluconate dehy 86.8 0.45 1.6E-05 47.2 4.1 33 5-37 3-35 (482)
438 1qyd_A Pinoresinol-lariciresin 86.7 0.52 1.8E-05 43.4 4.2 37 1-37 1-38 (313)
439 4ffl_A PYLC; amino acid, biosy 86.7 0.49 1.7E-05 44.9 4.1 33 6-38 3-35 (363)
440 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.7 0.45 1.5E-05 47.2 3.9 31 6-36 3-33 (478)
441 1ez4_A Lactate dehydrogenase; 86.6 0.44 1.5E-05 44.4 3.7 36 1-36 2-39 (318)
442 1y7t_A Malate dehydrogenase; N 86.6 0.41 1.4E-05 44.8 3.5 37 1-37 1-45 (327)
443 3r6d_A NAD-dependent epimerase 86.6 0.59 2E-05 40.7 4.3 32 6-37 7-40 (221)
444 3d1l_A Putative NADP oxidoredu 86.4 0.45 1.5E-05 43.0 3.5 33 5-37 11-44 (266)
445 3k30_A Histamine dehydrogenase 86.3 0.46 1.6E-05 49.5 4.0 37 6-42 525-563 (690)
446 3enk_A UDP-glucose 4-epimerase 86.3 0.62 2.1E-05 43.4 4.6 38 1-38 2-40 (341)
447 4b4o_A Epimerase family protei 86.3 0.61 2.1E-05 42.7 4.4 33 6-38 2-35 (298)
448 1wdk_A Fatty oxidation complex 85.9 0.4 1.4E-05 50.1 3.3 32 6-37 316-347 (715)
449 3tri_A Pyrroline-5-carboxylate 85.8 0.64 2.2E-05 42.5 4.3 34 4-37 3-39 (280)
450 3dqp_A Oxidoreductase YLBE; al 85.7 0.64 2.2E-05 40.3 4.1 32 6-37 2-34 (219)
451 3ond_A Adenosylhomocysteinase; 85.6 0.68 2.3E-05 45.6 4.5 33 5-37 266-298 (488)
452 1a4i_A Methylenetetrahydrofola 85.4 0.61 2.1E-05 42.8 3.8 32 5-36 166-198 (301)
453 2rir_A Dipicolinate synthase, 85.4 0.62 2.1E-05 43.0 4.0 33 5-37 158-190 (300)
454 3gt0_A Pyrroline-5-carboxylate 85.3 0.71 2.4E-05 41.2 4.2 33 5-37 3-39 (247)
455 1np3_A Ketol-acid reductoisome 85.3 0.6 2.1E-05 43.9 3.9 32 6-37 18-49 (338)
456 1oju_A MDH, malate dehydrogena 85.1 0.53 1.8E-05 43.4 3.3 32 6-37 2-35 (294)
457 2we8_A Xanthine dehydrogenase; 85.0 0.7 2.4E-05 44.2 4.2 35 4-38 204-238 (386)
458 2hk9_A Shikimate dehydrogenase 84.9 0.56 1.9E-05 42.7 3.4 32 5-36 130-161 (275)
459 1lnq_A MTHK channels, potassiu 84.9 0.58 2E-05 43.9 3.6 31 6-37 117-147 (336)
460 1b0a_A Protein (fold bifunctio 84.8 0.78 2.7E-05 41.8 4.2 32 5-36 160-192 (288)
461 3d3k_A Enhancer of mRNA-decapp 84.8 0.63 2.2E-05 41.9 3.6 27 7-33 89-118 (259)
462 1w4x_A Phenylacetone monooxyge 84.8 0.54 1.9E-05 47.4 3.5 34 5-38 187-220 (542)
463 3d4o_A Dipicolinate synthase s 84.8 0.69 2.4E-05 42.5 4.0 33 5-37 156-188 (293)
464 4gx0_A TRKA domain protein; me 84.7 0.63 2.2E-05 47.1 4.0 34 5-38 349-382 (565)
465 3zwc_A Peroxisomal bifunctiona 84.7 0.66 2.3E-05 48.5 4.2 33 5-37 317-349 (742)
466 1lqt_A FPRA; NADP+ derivative, 84.7 0.71 2.4E-05 45.4 4.3 35 5-39 148-203 (456)
467 1yb4_A Tartronic semialdehyde 84.7 0.49 1.7E-05 43.3 2.9 31 6-37 5-35 (295)
468 1zud_1 Adenylyltransferase THI 84.6 0.73 2.5E-05 41.3 4.0 32 5-36 29-61 (251)
469 1jzt_A Hypothetical 27.5 kDa p 84.6 0.62 2.1E-05 41.6 3.5 28 7-34 62-92 (246)
470 1ff9_A Saccharopine reductase; 84.6 0.74 2.5E-05 45.2 4.3 32 5-36 4-35 (450)
471 3d3j_A Enhancer of mRNA-decapp 84.5 0.65 2.2E-05 43.0 3.6 27 7-33 136-165 (306)
472 3h8v_A Ubiquitin-like modifier 84.5 0.61 2.1E-05 42.8 3.4 32 4-35 36-68 (292)
473 3ldh_A Lactate dehydrogenase; 84.4 0.61 2.1E-05 43.6 3.5 33 5-37 22-56 (330)
474 3jsk_A Cypbp37 protein; octame 84.4 2.7 9.3E-05 39.4 7.9 56 232-287 160-250 (344)
475 2o8n_A APOA-I binding protein; 84.3 0.69 2.4E-05 41.8 3.6 28 7-34 83-113 (265)
476 3fi9_A Malate dehydrogenase; s 84.3 0.77 2.6E-05 43.2 4.1 33 4-36 8-43 (343)
477 3don_A Shikimate dehydrogenase 84.3 0.66 2.3E-05 42.3 3.5 33 5-37 118-151 (277)
478 1i36_A Conserved hypothetical 84.2 0.66 2.2E-05 41.7 3.5 30 6-35 2-31 (264)
479 2i6t_A Ubiquitin-conjugating e 84.2 0.62 2.1E-05 43.1 3.4 33 5-37 15-49 (303)
480 2d5c_A AROE, shikimate 5-dehyd 84.0 0.78 2.7E-05 41.4 3.9 32 6-37 118-149 (263)
481 4a26_A Putative C-1-tetrahydro 84.0 0.83 2.9E-05 41.9 4.0 32 5-36 166-198 (300)
482 3rui_A Ubiquitin-like modifier 83.8 0.83 2.8E-05 42.8 4.1 33 4-36 34-67 (340)
483 1leh_A Leucine dehydrogenase; 83.8 0.79 2.7E-05 43.5 4.0 32 5-36 174-205 (364)
484 2gjc_A Thiazole biosynthetic e 83.7 2.8 9.7E-05 39.0 7.7 39 232-270 146-191 (326)
485 2dkn_A 3-alpha-hydroxysteroid 83.7 0.86 2.9E-05 40.4 4.1 32 6-37 3-35 (255)
486 2bry_A NEDD9 interacting prote 83.6 0.83 2.9E-05 45.4 4.3 57 232-288 166-230 (497)
487 3u62_A Shikimate dehydrogenase 83.5 0.84 2.9E-05 41.0 3.9 31 6-36 110-141 (253)
488 3ngx_A Bifunctional protein fo 83.5 0.84 2.9E-05 41.3 3.8 32 5-36 151-183 (276)
489 3nep_X Malate dehydrogenase; h 83.3 0.76 2.6E-05 42.7 3.5 32 6-37 2-35 (314)
490 4aj2_A L-lactate dehydrogenase 83.2 0.99 3.4E-05 42.2 4.4 32 5-36 20-53 (331)
491 1ldn_A L-lactate dehydrogenase 83.2 0.85 2.9E-05 42.4 3.9 33 5-37 7-41 (316)
492 2qrj_A Saccharopine dehydrogen 83.1 0.55 1.9E-05 44.9 2.6 39 4-42 214-257 (394)
493 2wm3_A NMRA-like family domain 83.0 0.82 2.8E-05 41.8 3.8 37 1-37 2-40 (299)
494 3tnl_A Shikimate dehydrogenase 83.0 0.91 3.1E-05 42.2 4.0 32 5-36 155-187 (315)
495 3jyo_A Quinate/shikimate dehyd 83.0 0.94 3.2E-05 41.4 4.0 32 5-36 128-160 (283)
496 1lu9_A Methylene tetrahydromet 82.9 0.9 3.1E-05 41.5 3.9 32 5-36 120-152 (287)
497 1qsg_A Enoyl-[acyl-carrier-pro 82.9 0.9 3.1E-05 40.8 3.9 32 6-37 11-45 (265)
498 1kdg_A CDH, cellobiose dehydro 82.9 1.3 4.4E-05 44.6 5.4 37 3-39 6-42 (546)
499 3vku_A L-LDH, L-lactate dehydr 82.8 0.77 2.6E-05 42.9 3.4 32 5-36 10-43 (326)
500 2h7i_A Enoyl-[acyl-carrier-pro 82.7 0.97 3.3E-05 40.7 4.0 32 6-37 9-43 (269)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4e-68 Score=529.46 Aligned_cols=438 Identities=50% Similarity=0.903 Sum_probs=388.8
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCC-CCccccCCCCceeeecccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTL-PDEVTFGRGRDWNVDLIPK 79 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~-p~~~~~g~~~~~~idl~p~ 79 (441)
|++.|||||||+|++|+++|+.|+++|++|+|+|+++++||.+++++ ..+++.+|.... |.. .+|..++|++|++|+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~-~~~l~~~~~~g~~~~~-~~g~~R~y~iDL~P~ 94 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLN-LTNLYNTFKPKENIPS-KYGENRHWNVDLIPK 94 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC-HHHHHHHHCTTSCCCG-GGCCGGGCCEESSCC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccc-hhhhhhhcccCCCccc-ccccccceEEeecCe
Confidence 66789999999999999999999999999999999999999999999 888777775332 222 467788999999999
Q ss_pred eeecCchHHHHHHHhCCcceeEEEEecceEEEe---------CCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhh
Q psy2620 80 FLMANGSLVKLLIHTGVTRYLEFKSVEGSYVFK---------GGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEF 150 (441)
Q Consensus 80 ~l~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~---------~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~ 150 (441)
++++.++++++|.++++.+|++|+.+++.|.+. +|+++++|.+..+.|.+.++++.+|+.+++|+..+.++
T Consensus 95 ~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~ 174 (475)
T 3p1w_A 95 FILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEW 174 (475)
T ss_dssp BEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHC
T ss_pred EeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998775 67899999998899999999999999999999999888
Q ss_pred cccCcccccccCCCCCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCC
Q psy2620 151 SEADPKTWKDINPQSATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYG 230 (441)
Q Consensus 151 ~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG 230 (441)
.+..+..|+.++....++.+|++++++++.+++++.+++++...+.+...|+...+.++..|+.++++||.+++.||+||
T Consensus 175 ~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG 254 (475)
T 3p1w_A 175 DANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYG 254 (475)
T ss_dssp CTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTC
T ss_pred hhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCC
Confidence 76656566655556789999999999999999999888888776666666888899999999999999998899999999
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEE-eCCEEEEEEe-CCeEEEcCEEEECCCCC---ccccccccceEEEEEEec
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVI-ENGKVVGVRS-GTEIARCKQVYCDPSYV---QDRVKKLNQVIRCICLMD 305 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~~v~~-~g~~~~a~~vI~~~~~~---~~~~~~~~~~~~~~~~~~ 305 (441)
+++|+++|++.++++|++|+++++|++|.. +++++++|++ +|++++||+||++++++ |..++..+.+.|.+++++
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~~~~~~v~R~i~I~~ 334 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKIKKIGQVIRCICILS 334 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccccccceEEEEEEEEe
Confidence 999999999999999999999999999998 7889999998 56889999999999998 877666788999999999
Q ss_pred CCCCCCCCCCeeEEEecCCCCCCCCcEEEEEecCCccccCCCeEEEEEEeeccCCChhhchHHHHhhcccccceeeeeee
Q psy2620 306 HPIPNTKDALSCQIIIPQKQVNRKSDIYVSLVSYTHQVSAKGWFIAMVSTTVETDNPELEIKPGLDLLGSYKKKFVTVSD 385 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~p~g~~~~~i~t~~~~~d~~~~l~~~l~~l~p~~~~~~~~~~ 385 (441)
+|+..+....+.++++|+.+.++.++||+.+++.+++.||+|+++++++|..++.||+++|+++++.|.|..+.|+++..
T Consensus 335 ~pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~~~cp~G~~i~~~st~~e~~~~~~~l~~~l~~l~~~~~~~~~~~~ 414 (475)
T 3p1w_A 335 NPIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISD 414 (475)
T ss_dssp SCCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHHTTCSEEEEEEEEEE
T ss_pred ccCcccCCCceEEEEeCCcccCCCCCEEEEEECCCcCcCCCCcEEEEEEeecCCCCHHHHHHHHHHHhcchhheeccchh
Confidence 99877666678899999988888899999999999999999999999999888889999999999999999999999999
Q ss_pred ccccCCCCCCCceeeccCCCCCCChHhHHHHHHHHHhhccCCccccccchhhhhc
Q psy2620 386 YYEPTDLGTESQIFISTSYDATTHFETVCTDVVNLFKRGTGEDFDFSKIKLEEEA 440 (441)
Q Consensus 386 ~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 440 (441)
.|+|.++|.++|||+++++|+++|||..+++|+++|++++|+++||.+....++.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 469 (475)
T 3p1w_A 415 LYVSTSKKPADNIFVTSSYDATSHFETATNDLLQIWENLWGQKLNFDDLNTNADG 469 (475)
T ss_dssp EEEESCSSCTTCEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC---------
T ss_pred eeeecccCCCCCEEEeCCCCCccchHHHHHHHHHHHHHHhCCcceecCCCccccc
Confidence 9999999999999999999999999999999999999999999999988776653
No 2
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=2e-54 Score=435.35 Aligned_cols=436 Identities=53% Similarity=0.940 Sum_probs=365.2
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCC------ccccCCCCceee
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPD------EVTFGRGRDWNV 74 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~------~~~~g~~~~~~i 74 (441)
|+.++||||||||++||+||++|+++|++|+|||+++++||+++|++ .+..+.. +|... ...++.+.+|.+
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~g~~~~--~d~~~~~~~~~~~~~~~g~~~~~ 84 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVT-LSQLYEK--FKQNPISKEERESKFGKDRDWNV 84 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC-HHHHHHH--HCSSCCCHHHHHHHHCCGGGCCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccee-ccchhce--eccCCccccCcchhcccccceee
Confidence 44679999999999999999999999999999999999999999998 7642111 22100 001344568999
Q ss_pred ecccceeecCchHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccC
Q psy2620 75 DLIPKFLMANGSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEAD 154 (441)
Q Consensus 75 dl~p~~l~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~ 154 (441)
++.|+++...+.+.+++.++++.++++|...+..|.+.+|+.+.+|.+..+.+.+.+.++++++.+++|+..+..+....
T Consensus 85 ~l~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (453)
T 2bcg_G 85 DLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDD 164 (453)
T ss_dssp ESSCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTB
T ss_pred ccccceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999899999998888888999999999966888888889999999999999988766544
Q ss_pred cccccccCCCCCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCCcchH
Q psy2620 155 PKTWKDINPQSATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYGLGEL 234 (441)
Q Consensus 155 ~~~~~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG~~~l 234 (441)
|..++.++....++.+|++++++++.+++++...+.+...+.+...|....+.++..|+.+++.++.++|.+|+||++++
T Consensus 165 p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~~~l 244 (453)
T 2bcg_G 165 LSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGEL 244 (453)
T ss_dssp GGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTTHH
T ss_pred chhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhhcCCceEeeCCCHHHH
Confidence 44443333356899999999999999999887766665544566667777777778888888888878899999999999
Q ss_pred HHHHHHHHHHcCcEEEcccceeEEEEe--CCEEEEEEeCCeEEEcCEEEECCCCCcccccccc-ceEEEEEEecCCCCCC
Q psy2620 235 PQSFARLSAIYGGTYMLDKPVDEIVIE--NGKVVGVRSGTEIARCKQVYCDPSYVQDRVKKLN-QVIRCICLMDHPIPNT 311 (441)
Q Consensus 235 ~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~~v~~~g~~~~a~~vI~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (441)
+++|++.++++|++|+++++|++|..+ ++++++|+++|+++.||+||+++++|+.+++... ...+++++++++..+.
T Consensus 245 ~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 324 (453)
T 2bcg_G 245 PQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNT 324 (453)
T ss_dssp HHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEEESSCCTTS
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEEEccccCCC
Confidence 999999999999999999999999998 8998899989999999999999999988776555 6788888888876644
Q ss_pred CCCCeeEEEecCCCCCCCCcEEEEEecCCccccCCCeEEEEEEeeccCCChhhchHHHHhhcccccceeeeeeeccccCC
Q psy2620 312 KDALSCQIIIPQKQVNRKSDIYVSLVSYTHQVSAKGWFIAMVSTTVETDNPELEIKPGLDLLGSYKKKFVTVSDYYEPTD 391 (441)
Q Consensus 312 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~p~g~~~~~i~t~~~~~d~~~~l~~~l~~l~p~~~~~~~~~~~~~p~~ 391 (441)
....+.++++|..+....+.+|+...+.....||+|+.++++.++.+..|++++|++++++|.|..+.++++..+|+|.+
T Consensus 325 ~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 404 (453)
T 2bcg_G 325 SNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPRE 404 (453)
T ss_dssp TTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHGGGCSCSEEEEEEEEEEEESS
T ss_pred CCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCCCCHHHHHHHHHHHhhhHHHhhccchheeeecC
Confidence 33345677788665555678999888765578999999999998887789999999999999998888898889999988
Q ss_pred CCCCCceeeccCCCCCCChHhHHHHHHHHHhhccCCccccccchhhhh
Q psy2620 392 LGTESQIFISTSYDATTHFETVCTDVVNLFKRGTGEDFDFSKIKLEEE 439 (441)
Q Consensus 392 ~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 439 (441)
++..+|||+++++|.+++||...+++++++++++|+++||+|...+|.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (453)
T 2bcg_G 405 DGSKDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQRQEQEK 452 (453)
T ss_dssp CSTTTSEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCCCCCC----
T ss_pred CCCCCCEEECCCCCccccHHHHHHHHHHHHHHHHCCccccccCccccc
Confidence 778899999999999999999999999999999999999998776653
No 3
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=8.9e-54 Score=437.21 Aligned_cols=423 Identities=26% Similarity=0.502 Sum_probs=352.9
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhC---C--C----------------
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFG---S--T---------------- 59 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~---~--d---------------- 59 (441)
|+++|||+|||+|+.|++.|+.|++.|++|+|+|++++|||.+.+++ +.++..|.. . +
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~-l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFS-FSGLLSWLKEYQENNDVVTENSMWQEQILENE 83 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC-HHHHHHHHHHTC----------CGGGGCCTTE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccccc-HHHHHHHHHHhhccccccccccchhhhhhcch
Confidence 45579999999999999999999999999999999999999999999 888876421 0 0
Q ss_pred ------------------------------------------------------------------------CC---C--
Q psy2620 60 ------------------------------------------------------------------------LP---D-- 62 (441)
Q Consensus 60 ------------------------------------------------------------------------~p---~-- 62 (441)
.| .
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (650)
T 1vg0_A 84 EAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQC 163 (650)
T ss_dssp EEEEBCSSCCCEEEEEEEECSCC---------------------------------------------------------
T ss_pred hhccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00 0
Q ss_pred -----------------------------------------------cc----ccCCCCceeeecccceeecCchHHHHH
Q psy2620 63 -----------------------------------------------EV----TFGRGRDWNVDLIPKFLMANGSLVKLL 91 (441)
Q Consensus 63 -----------------------------------------------~~----~~g~~~~~~idl~p~~l~~~~~~~~~l 91 (441)
.+ .++.+++|++|++|+++++.+.++++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~PklL~~~g~lv~LL 243 (650)
T 1vg0_A 164 PGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLL 243 (650)
T ss_dssp -----------------------------------------------CCCHHHHHHTGGGCCEESSCCCEESSSHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeCCeeeeCCcHHHHHH
Confidence 00 023578999999999999999999999
Q ss_pred HHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCcccccccCCCCCcHHHH
Q psy2620 92 IHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWKDINPQSATTAQL 171 (441)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 171 (441)
+++|+.+|++|+.++..|++.+|+++.+|++..+.|.+..+++.+|+.+++|+..+..+.. .+..|+.+ ...++.+|
T Consensus 244 ~~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p~~~~~~--d~~S~~d~ 320 (650)
T 1vg0_A 244 IKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HPDEYRAY--EGTTFSEY 320 (650)
T ss_dssp HHHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CHHHHHTT--TTSBHHHH
T ss_pred HHcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-ChHHHhhh--ccCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988654 34444434 46899999
Q ss_pred HHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCCcchHHHHHHHHHHHcCcEEEc
Q psy2620 172 YDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQSFARLSAIYGGTYML 251 (441)
Q Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~ 251 (441)
++++++++.+++++.+.+++.... ..|...++.++..|+.++++||.+++.||+||+++|+++|+|.++++||+|++
T Consensus 321 L~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l 397 (650)
T 1vg0_A 321 LKTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 397 (650)
T ss_dssp HTTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEES
T ss_pred HHHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhhccCceEEeCCchhHHHHHHHHHHHHcCCEEEe
Confidence 999999999999987766655322 13666777778889989999988899999999999999999999999999999
Q ss_pred ccceeEEEEeC--CEEEEEEe-CCeEEEcCEEEECCCCCcccccc---ccceEEEEEEecCCCCCCCC-CCeeEEEecCC
Q psy2620 252 DKPVDEIVIEN--GKVVGVRS-GTEIARCKQVYCDPSYVQDRVKK---LNQVIRCICLMDHPIPNTKD-ALSCQIIIPQK 324 (441)
Q Consensus 252 ~~~V~~i~~~~--~~~~~v~~-~g~~~~a~~vI~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~ 324 (441)
+++|++|..++ |+++||+. +|++++|++||+++.++|..+.. .+.+.|+++++++++..... +..+.+++|+.
T Consensus 398 ~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~ 477 (650)
T 1vg0_A 398 RHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAE 477 (650)
T ss_dssp SCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTTTTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCS
T ss_pred CCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHhccccccceEEEEEEecCCCCCcCCCcceEEEEccCc
Confidence 99999999987 89999985 68999999999998888865532 46799999999998876443 35677788876
Q ss_pred CCCCCCcEEEEEecCCccccCCCeEEEEEEeeccCCChhhchHHHHhhc-cccc------------ceeeeee----ecc
Q psy2620 325 QVNRKSDIYVSLVSYTHQVSAKGWFIAMVSTTVETDNPELEIKPGLDLL-GSYK------------KKFVTVS----DYY 387 (441)
Q Consensus 325 ~~~~~~~i~~~~~~~~~~~~p~g~~~~~i~t~~~~~d~~~~l~~~l~~l-~p~~------------~~~~~~~----~~~ 387 (441)
+ ++.+.||+.+++..++.||+|+++++++|. ++.+|.++|++++++| .|.- +.+|++| ..+
T Consensus 478 ~-g~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~-~~~~~~~eLe~~l~~L~~~~~~~~~~~~~~~~~~vLws~~~~~~~~~ 555 (650)
T 1vg0_A 478 E-PGSFAVRVIELCSSTMTCMKGTYLVHLTCM-SSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSS 555 (650)
T ss_dssp S-TTSCCEEEEEECGGGTSSCTTCEEEEEEEE-CSSCHHHHHHHHHHHHCBSCSCCC-------CCBEEEEEEEEEEECT
T ss_pred c-CCCCCEEEEEeCCCCCCCCCCCEEEEEEee-cCCCHHHHHHHHHHHHhccccccccccccccCCceEEEEEEEeeccc
Confidence 5 456789999999999999999999999886 5679999999999999 3321 2344443 334
Q ss_pred ---ccCCCCCCCceeeccCCCCCCChHhHHHHHHHHHhhccCCcccccc
Q psy2620 388 ---EPTDLGTESQIFISTSYDATTHFETVCTDVVNLFKRGTGEDFDFSK 433 (441)
Q Consensus 388 ---~p~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 433 (441)
.|..++.++|||+++++|.+++|+..+++|+++|++++| +-||.-
T Consensus 556 ~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~~-~e~F~p 603 (650)
T 1vg0_A 556 DISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICP-NEDFCP 603 (650)
T ss_dssp TCCGGGSSSCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHST-TCCSSC
T ss_pred ccccccccCCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHcC-CCCCCC
Confidence 344467889999999999999999999999999999996 667754
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=4.9e-52 Score=415.46 Aligned_cols=427 Identities=68% Similarity=1.153 Sum_probs=358.6
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhh-CCCC---CCccccCCCCceeeec
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKF-GSTL---PDEVTFGRGRDWNVDL 76 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~-~~d~---p~~~~~g~~~~~~idl 76 (441)
|++.+||+|||||++||+||++|+++|++|+|+|+++++||+++|++++. +++ .++. |.. .++.+..|.+|+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~---~g~~~~~~~~~~~~-~~~~g~~~~~d~ 78 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLE---ELYKRFQLLEGPPE-TMGRGRDWNVDL 78 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHH---HHHHHTTCTTCCCG-GGCCGGGCCEES
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHH---HHHhhccCCCCChh-HhcccCceEEcc
Confidence 77789999999999999999999999999999999999999999876212 233 2331 211 345557899999
Q ss_pred ccceeecCchHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCcc
Q psy2620 77 IPKFLMANGSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPK 156 (441)
Q Consensus 77 ~p~~l~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~ 156 (441)
+|+++...+.+.+++.++++.++++|...+..|.+.+|+.+.+|.+..+.+.+.+.++++++.+++|+..+..+....+.
T Consensus 79 gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ 158 (433)
T 1d5t_A 79 IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPK 158 (433)
T ss_dssp SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGG
T ss_pred CcceeeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCch
Confidence 99999998999999999999989999998888888899999999986688888888888999999999998886654444
Q ss_pred cccccCCCCCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCCcchHHH
Q psy2620 157 TWKDINPQSATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQ 236 (441)
Q Consensus 157 ~~~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG~~~l~~ 236 (441)
.++..+....++.+|+++++.++.+++++...++++..+.+...|....+..+..|..+++.+|.+++.+|+||++++++
T Consensus 159 ~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~~l~~ 238 (433)
T 1d5t_A 159 TFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQ 238 (433)
T ss_dssp GGTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTTHHHH
T ss_pred hccccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHHHHHH
Confidence 33323335689999999999999999988766655554445556766677777777777777887789999999999999
Q ss_pred HHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccccccccceEEEEEEecCCCCCCCCCCe
Q psy2620 237 SFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDRVKKLNQVIRCICLMDHPIPNTKDALS 316 (441)
Q Consensus 237 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (441)
+|++.++++|++|+++++|++|..+++++++|.++|++++||+||+++++++..++......+.++++++++.+......
T Consensus 239 ~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 318 (433)
T 1d5t_A 239 GFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTNDANS 318 (433)
T ss_dssp HHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEEESSCCTTSTTCSS
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEEEcCcccccCCCce
Confidence 99999999999999999999999999999989889999999999999999987664434466677778887765433356
Q ss_pred eEEEecCCCCCCCCcEEEEEecCCccccCCCeEEEEEEeeccCCChhhchHHHHhhcccccceeeeeeeccccCCCCCCC
Q psy2620 317 CQIIIPQKQVNRKSDIYVSLVSYTHQVSAKGWFIAMVSTTVETDNPELEIKPGLDLLGSYKKKFVTVSDYYEPTDLGTES 396 (441)
Q Consensus 317 ~~~~~p~~~~~~~~~i~~~~~~~~~~~~p~g~~~~~i~t~~~~~d~~~~l~~~l~~l~p~~~~~~~~~~~~~p~~~g~~~ 396 (441)
.++++|..+..+.+.+|+...+.+...||+|+.++++.++.+..|++++|++++++|.|..+.++++...|+|.+++..+
T Consensus 319 ~~i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 398 (433)
T 1d5t_A 319 CQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALGLLEPIDQKFVAISDLYEPIDDGSES 398 (433)
T ss_dssp EEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHTTTCSCSEEEEEEEEEEEESCCSTTT
T ss_pred EEEEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCCCHHHHHHHHHHHhhhHHhheeccceeeeecCCCCCC
Confidence 77888866555567899988887778899999999998888788999999999999999999999999999998888889
Q ss_pred ceeeccCCCCCCChHhHHHHHHHHHhhccCCcccc
Q psy2620 397 QIFISTSYDATTHFETVCTDVVNLFKRGTGEDFDF 431 (441)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 431 (441)
||++++++|.+++||..++++.++|++++|+++||
T Consensus 399 ~~~~~~~~d~~~~~e~~~~~~~~~~~~~~~~~~~~ 433 (433)
T 1d5t_A 399 QVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 433 (433)
T ss_dssp CEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC
T ss_pred CEEECCCCCccccHHHHHHHHHHHHHHHhCCcCCC
Confidence 99999999999999999999999999999999997
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2.2e-32 Score=278.78 Aligned_cols=358 Identities=15% Similarity=0.158 Sum_probs=212.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeecC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMAN 84 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~~ 84 (441)
.+|||||||++||+||++|+++|++|+|||+++++||+++|++ .. | |.+|.+|+++...
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~----G----------------~~~D~G~~~~~~~ 60 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQ----G----------------FTFDAGPTVITDP 60 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ET----T----------------EEEECSCCCBSCT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eC----C----------------EEEecCceeecCc
Confidence 5799999999999999999999999999999999999999988 44 4 4556677776555
Q ss_pred chHHHHHHHhC--CcceeEEEEecceE--EEeCCeEEeCCCChHHHhhhccCC--hHHHHHHHHHHHHHHhhcccCcccc
Q psy2620 85 GSLVKLLIHTG--VTRYLEFKSVEGSY--VFKGGKISKVPVDQKEALASDLMG--LFEKRRFRNFLVYIQEFSEADPKTW 158 (441)
Q Consensus 85 ~~~~~~l~~~~--~~~~l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~~~~--~~~k~~l~~~~~~~~~~~~~~~~~~ 158 (441)
+.+.+++...+ +.+++++.+.++.+ .+.+|+.+.++.+. +.+...+.. ..+...+.+|++.++.........+
T Consensus 61 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 139 (501)
T 4dgk_A 61 SAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQ-TRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKL 139 (501)
T ss_dssp HHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCH-HHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--
T ss_pred hhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccH-HHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhc
Confidence 55556666554 44678888887765 55788888888774 444333222 2355677788877765443211111
Q ss_pred cccCC-------------C----CCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCC
Q psy2620 159 KDINP-------------Q----SATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGK 221 (441)
Q Consensus 159 ~~~~~-------------~----~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~ 221 (441)
...+. . ..++.+++.++..++.++.++........... ...+.... ++. .....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p-~~~~~~~~------~~~--~~~~~ 210 (501)
T 4dgk_A 140 GTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNP-FATSSIYT------LIH--ALERE 210 (501)
T ss_dssp CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC---CCCTHH------HHH--HHHSC
T ss_pred cccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCc-chhhhhhh------hhh--hhhcc
Confidence 00100 0 01333444444444444443321111110000 00110000 000 01123
Q ss_pred CCeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc--c--------
Q psy2620 222 SPYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD--R-------- 290 (441)
Q Consensus 222 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~--~-------- 290 (441)
.+..+|+||+++|+++|++.++++|++|+++++|++|..+++++++|++ +|+++.||.||++++++.. .
T Consensus 211 ~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~ 290 (501)
T 4dgk_A 211 WGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA 290 (501)
T ss_dssp CCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------
T ss_pred CCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc
Confidence 3567899999999999999999999999999999999999999999997 6899999999998765320 0
Q ss_pred ------c---ccccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEEEEEecCCccccCCCeE-EEEEEeeccCC
Q psy2620 291 ------V---KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIYVSLVSYTHQVSAKGWF-IAMVSTTVETD 360 (441)
Q Consensus 291 ------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~p~g~~-~~~i~t~~~~~ 360 (441)
+ +...+.+.+++.+++++... ....+++.+.... ........+..|+... .+++++..
T Consensus 291 ~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l---~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~s~~--- 358 (501)
T 4dgk_A 291 VKQSNKLQTKRMSNSLFVLYFGLNHHHDQL---AHHTVCFGPRYRE------LIDEIFNHDGLAEDFSLYLHAPCVT--- 358 (501)
T ss_dssp ------------CCEEEEEEEEESSCCTTS---CSEEEEEECC-------------------CCCEEEEEEECGGGT---
T ss_pred hhhhhhhhccccCCceeEEEecccCCcccc---ccceeccccchhh------hccccccccccccCCceecccCCCC---
Confidence 1 11345677888888775442 2334444443110 0001111223343332 33345554
Q ss_pred ChhhchHHHHhhcccccceeeeeeeccccCC-CCCCCceeeccCCCCCCChHhHHHHHHHHHhhc
Q psy2620 361 NPELEIKPGLDLLGSYKKKFVTVSDYYEPTD-LGTESQIFISTSYDATTHFETVCTDVVNLFKRG 424 (441)
Q Consensus 361 d~~~~l~~~l~~l~p~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 424 (441)
||+ ++|+|++.+++++. .|+. .. ..+|+. .++++.+++++.+++.
T Consensus 359 dp~---------~ap~G~~~~~~~~~-~p~~~~~-------~~~~~~--~~~~~~~~vl~~l~~~ 404 (501)
T 4dgk_A 359 DSS---------LAPEGCGSYYVLAP-VPHLGTA-------NLDWTV--EGPKLRDRIFAYLEQH 404 (501)
T ss_dssp CGG---------GSSTTCEEEEEEEE-ECCTTTS-------CCCHHH--HHHHHHHHHHHHHHHH
T ss_pred CCC---------cCCCCCceEEEEEe-cCccccc-------cccHHH--HHHHHHHHHHHHHHHh
Confidence 999 99999998877644 3432 11 125666 5789999999999874
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.93 E-value=2.3e-23 Score=207.55 Aligned_cols=368 Identities=16% Similarity=0.165 Sum_probs=216.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeec-
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMA- 83 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~- 83 (441)
+||||||||++||+||++|+++|++|+|||+++++||+++++. .. | +.++.+|..+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~----G----------------~~~d~G~~~~~~~ 59 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YK----G----------------FQLSSGAFHMLPN 59 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ET----T----------------EEEESSSCSCBTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cC----C----------------cEEcCCCceEecC
Confidence 4899999999999999999999999999999999999998876 33 3 445555544332
Q ss_pred --CchHHHHHHHhCCcceeEEEEecceE-EEe--C--------CeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhh
Q psy2620 84 --NGSLVKLLIHTGVTRYLEFKSVEGSY-VFK--G--------GKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEF 150 (441)
Q Consensus 84 --~~~~~~~l~~~~~~~~l~~~~~~~~~-~~~--~--------g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~ 150 (441)
...+.+++.+.++...+. ..+..+ .+. + ++.+.++. + ...++..++..+...+.....
T Consensus 60 ~~~~~~~~l~~~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~- 130 (425)
T 3ka7_A 60 GPGGPLACFLKEVEASVNIV--RSEMTTVRVPLKKGNPDYVKGFKDISFND-----F-PSLLSYKDRMKIALLIVSTRK- 130 (425)
T ss_dssp GGGSHHHHHHHHTTCCCCEE--ECCCCEEEEESSTTCCSSTTCEEEEEGGG-----G-GGGSCHHHHHHHHHHHHHTTT-
T ss_pred CCccHHHHHHHHhCCCceEE--ecCCceEEeecCCCcccccccccceehhh-----h-hhhCCHHHHHHHHHHHHhhhh-
Confidence 235677888888754332 222222 221 1 33333321 1 123444444443333222110
Q ss_pred cccCcccccccCCCCCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCC
Q psy2620 151 SEADPKTWKDINPQSATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYG 230 (441)
Q Consensus 151 ~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG 230 (441)
......++.+|++++.-++.++.++..............-+....+..+..+ ...+ ...++.||
T Consensus 131 ----------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~~--~~~~~~gG 194 (425)
T 3ka7_A 131 ----------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM----YRFG--GTGIPEGG 194 (425)
T ss_dssp ----------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHHC--SCEEETTS
T ss_pred ----------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH----HhcC--CccccCCC
Confidence 0113579999999875554455544322211111111111222222222211 1223 35789999
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCc--------------ccc----c
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQ--------------DRV----K 292 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~--------------~~~----~ 292 (441)
++.++++|++.++++|++|+++++|++|..+++++++|+++|++++||.||++++.+. ... .
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~ 274 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVG 274 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999876532 100 1
Q ss_pred --cccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEEEEEe-cCCccccCCCeEEEEEEeeccCCC---hhhch
Q psy2620 293 --KLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIYVSLV-SYTHQVSAKGWFIAMVSTTVETDN---PELEI 366 (441)
Q Consensus 293 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~-~~~~~~~p~g~~~~~i~t~~~~~d---~~~~l 366 (441)
.....+++++.+++++. ....++++++. . ....+... ......+|.|+.++.+.......+ +++++
T Consensus 275 ~~~~~~~~~v~l~~~~~~~-----~~~~~~~~~~~-~--~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~ 346 (425)
T 3ka7_A 275 TLQPSAGIKICLAADEPLV-----GHTGVLLTPYT-R--RINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEI 346 (425)
T ss_dssp HCCCBEEEEEEEEESSCSS-----CSSSEEECCSS-S--SEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHH
T ss_pred CcCCCceEEEEeecCCCcc-----CcCEEEECCCh-h--hcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHH
Confidence 13456788889988753 12344555431 1 11223333 334578999998776543321111 12445
Q ss_pred HHHHhhc---cccc--c--eeeeee---eccccCC-----CCCC-CceeeccCCCCC---CChHhHHHHHHHHHhhccC
Q psy2620 367 KPGLDLL---GSYK--K--KFVTVS---DYYEPTD-----LGTE-SQIFISTSYDAT---THFETVCTDVVNLFKRGTG 426 (441)
Q Consensus 367 ~~~l~~l---~p~~--~--~~~~~~---~~~~p~~-----~g~~-~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~ 426 (441)
+.+++.| .|.. + ++..+. .+|.|-. ...+ +|++++.+|... ..-+.++--+....+++.|
T Consensus 347 ~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 347 EMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 5555544 5642 1 111111 2343321 1122 689999998543 3557777777887777754
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.93 E-value=2.5e-23 Score=207.07 Aligned_cols=363 Identities=13% Similarity=0.140 Sum_probs=218.8
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeec--
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMA-- 83 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~-- 83 (441)
||||||||++||+||++|+++|++|+|||+++++||+++++. .. .|.+|.+|..+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~--------------------g~~~d~G~~~~~~~~ 60 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YK--------------------GFQLSTGALHMIPHG 60 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ET--------------------TEEEESSSCSEETTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cC--------------------CEEEecCCeEEEccC
Confidence 899999999999999999999999999999999999999877 33 3556777755543
Q ss_pred -CchHHHHHHHhCCcceeEEEEecce-EEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccccccc
Q psy2620 84 -NGSLVKLLIHTGVTRYLEFKSVEGS-YVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWKDI 161 (441)
Q Consensus 84 -~~~~~~~l~~~~~~~~l~~~~~~~~-~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~~~ 161 (441)
...+.+++.+.++. .++...++. .++.+|+.+.++... ..++..++..+.+++...... ..
T Consensus 61 ~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~---------~~ 123 (421)
T 3nrn_A 61 EDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKALKLLAEIRMN---------KL 123 (421)
T ss_dssp TSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------CCHHHHHTT---------CC
T ss_pred CChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHHHHHHHHHhc---------cC
Confidence 24677788887764 344444433 233477777765431 123334444444444333221 01
Q ss_pred CCCCCcHHHHHHHhCCCc-chhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCCcchHHHHHHH
Q psy2620 162 NPQSATTAQLYDKFGLDP-NTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQSFAR 240 (441)
Q Consensus 162 ~~~~~s~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG~~~l~~~l~~ 240 (441)
+....++.+|+.++++.+ .++.++..............-+....+..+..+ ..++ ++.+|.||++.++++|++
T Consensus 124 ~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--g~~~~~gG~~~l~~~l~~ 197 (421)
T 3nrn_A 124 PKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAA----LRWG--GPGLIRGGCKAVIDELER 197 (421)
T ss_dssp CCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHHC--SCEEETTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHH----hhcC--CcceecCCHHHHHHHHHH
Confidence 223478999999875443 334444322221111111112322222222221 1222 457899999999999999
Q ss_pred HHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCc-------c----cc------ccccceEEEEEE
Q psy2620 241 LSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQ-------D----RV------KKLNQVIRCICL 303 (441)
Q Consensus 241 ~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~-------~----~~------~~~~~~~~~~~~ 303 (441)
.+++.|++|+++++|++|..+++++ |.++|++++||.||++++.+. + .. ......+.+.+.
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~~~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~ 275 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINIEEKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLA 275 (421)
T ss_dssp HHHTTTCEEESSCCEEEEETTTTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEE
T ss_pred HHHHCCCEEEcCCeEEEEEEECCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEE
Confidence 9999999999999999998878876 777888999999999876532 1 11 013467788889
Q ss_pred ecCCCCCCCCCCeeEEEecCCCCCCCCcEEEEEe-cCCccccCCCeEEEEEEeeccCCChhhchHHHHhhc---ccccce
Q psy2620 304 MDHPIPNTKDALSCQIIIPQKQVNRKSDIYVSLV-SYTHQVSAKGWFIAMVSTTVETDNPELEIKPGLDLL---GSYKKK 379 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~-~~~~~~~p~g~~~~~i~t~~~~~d~~~~l~~~l~~l---~p~~~~ 379 (441)
+++++.. ...++++++.. ... +... ......+|.|+.++.++......+++++++.++++| .|..+
T Consensus 276 ~~~~~~~-----~~~~~~~~~~~--~~~--i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~- 345 (421)
T 3nrn_A 276 VPGEPRI-----GNTIVFTPGLM--ING--FNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGE- 345 (421)
T ss_dssp EESSCSS-----CSSEEECTTSS--SCE--EECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTTCE-
T ss_pred EcCCccc-----CCeEEEcCCcc--eee--EeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCCCe-
Confidence 9887421 23344444321 111 2222 345567999999888877665555555566666655 57322
Q ss_pred eeeee------eccccCC----CCCCCceeeccCCCCCC-Ch--HhHHHHHHHHHhhc
Q psy2620 380 FVTVS------DYYEPTD----LGTESQIFISTSYDATT-HF--ETVCTDVVNLFKRG 424 (441)
Q Consensus 380 ~~~~~------~~~~p~~----~g~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~ 424 (441)
...+. .+|.+.. .-.++|++++.+|-... -. +..+.-....-+++
T Consensus 346 ~~~~~~~~~~~p~~~~~~~~~~~~~~~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 346 PLLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp EEEEEEC-------------CCCCCCSSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEeeeccCCCCcccccCCCCCCCCCCcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 11111 2232111 01128899999995443 23 77666666666665
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.87 E-value=4.7e-20 Score=186.45 Aligned_cols=269 Identities=15% Similarity=0.113 Sum_probs=164.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceee
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLM 82 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~ 82 (441)
..+||+|||||++||+||++|+++|++|+|||+++++||+++|.+ .. .+.+|.+++++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~--------------------g~~~~~g~~~~~ 73 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LA--------------------GYLVEQGPNSFL 73 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ET--------------------TEEEESSCCCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cC--------------------CeeeecChhhhh
Confidence 358999999999999999999999999999999999999999987 33 356777887776
Q ss_pred cC-chHHHHHHHhCCcceeEEEEe--cceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccccc
Q psy2620 83 AN-GSLVKLLIHTGVTRYLEFKSV--EGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWK 159 (441)
Q Consensus 83 ~~-~~~~~~l~~~~~~~~l~~~~~--~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~ 159 (441)
.. ..+.+++.+.++...+..... ...+++.+|+.+.+|.+..+.+...+.++.++. +.+..+.....
T Consensus 74 ~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---- 143 (478)
T 2ivd_A 74 DREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARL------RVAGELFSRRA---- 143 (478)
T ss_dssp TTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHH------HHHGGGGCCCC----
T ss_pred hhhHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHH------HHhhhhhcCCC----
Confidence 54 456788888888655442221 123566788888888875444433444433221 12222211100
Q ss_pred ccCCCCCcHHHHHHHhCCCcchhHHHHHHhh-cccCccccchhHHHHHHHHHHH-------HHHhh------------hh
Q psy2620 160 DINPQSATTAQLYDKFGLDPNTKDFTGHALA-LYRDDEYINDLAIHTIRRIKLY-------SDSLA------------RY 219 (441)
Q Consensus 160 ~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~-------~~s~~------------~~ 219 (441)
......++.+|+++..-++....++..... .+..+. ..-+....+..+..+ +..+. ..
T Consensus 144 -~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (478)
T 2ivd_A 144 -PEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDV-EQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAG 221 (478)
T ss_dssp -CTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCCCT-TTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----C
T ss_pred -CCCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecCCH-HHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccc
Confidence 012457999999875322222223322211 111110 000111111111111 00000 00
Q ss_pred CC----CCeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCeEEEcCEEEECCCCC----
Q psy2620 220 GK----SPYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTEIARCKQVYCDPSYV---- 287 (441)
Q Consensus 220 G~----~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~~~~a~~vI~~~~~~---- 287 (441)
.. ..+.+++||++.|+++|++.+ |++|+++++|++|..++++ +.|.+ +|++++||+||++.+.+
T Consensus 222 ~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ 297 (478)
T 2ivd_A 222 TAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAREDGG-WRLIIEEHGRRAELSVAQVVLAAPAHATAK 297 (478)
T ss_dssp CSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC--C-CEEEEEETTEEEEEECSEEEECSCHHHHHH
T ss_pred ccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe-EEEEEeecCCCceEEcCEEEECCCHHHHHH
Confidence 11 468899999999999998765 6799999999999876655 55664 56789999999977542
Q ss_pred -----ccc----c--ccccceEEEEEEecCCC
Q psy2620 288 -----QDR----V--KKLNQVIRCICLMDHPI 308 (441)
Q Consensus 288 -----~~~----~--~~~~~~~~~~~~~~~~~ 308 (441)
|.. + ...+.+.++++.++++.
T Consensus 298 ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~ 329 (478)
T 2ivd_A 298 LLRPLDDALAALVAGIAYAPIAVVHLGFDAGT 329 (478)
T ss_dssp HHTTTCHHHHHHHHTCCBCCEEEEEEEECTTS
T ss_pred HhhccCHHHHHHHhcCCCCcEEEEEEEEcccc
Confidence 111 1 12456788999998764
No 9
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.86 E-value=6.5e-21 Score=194.40 Aligned_cols=306 Identities=12% Similarity=0.093 Sum_probs=168.8
Q ss_pred cccEEEECCChhHHHHHhhhccC-CCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceee
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS-GKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLM 82 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~ 82 (441)
.+||||||||++||+||++|+++ |++|+|||+++++||+++|+.-.+ .|.+|.+|+++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~--------------------G~~~D~G~h~~~ 69 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPE--------------------GFLYDVGGHVIF 69 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTT--------------------SCEEESSCCCCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecC--------------------CEEEEeCceEec
Confidence 48999999999999999999985 999999999999999998853011 356788888887
Q ss_pred cCc-hHHHHHHHhCCcceeEEEEecc-eEEEeCCeEEeCCCChHHHhhhccCChHHH-HHHHHHHHHHHhhcccCccccc
Q psy2620 83 ANG-SLVKLLIHTGVTRYLEFKSVEG-SYVFKGGKISKVPVDQKEALASDLMGLFEK-RRFRNFLVYIQEFSEADPKTWK 159 (441)
Q Consensus 83 ~~~-~~~~~l~~~~~~~~l~~~~~~~-~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k-~~l~~~~~~~~~~~~~~~~~~~ 159 (441)
... .+.+++.+.+... .++...++ .+++.+|+++..|... ... ....... +....++........
T Consensus 70 ~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~~g~~~~~p~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~------- 137 (513)
T 4gde_A 70 SHYKYFDDCLDEALPKE-DDWYTHQRISYVRCQGQWVPYPFQN-NIS---MLPKEEQVKCIDGMIDAALEARV------- 137 (513)
T ss_dssp CCBHHHHHHHHHHSCSG-GGEEEEECCEEEEETTEEEESSGGG-GGG---GSCHHHHHHHHHHHHHHHHHHHT-------
T ss_pred CCCHHHHHHHHHhCCcc-ceeEEecCceEEEECCeEeecchhh-hhh---hcchhhHHHHHHHHHHHHHhhhc-------
Confidence 654 5667777765432 23333333 3566789888887542 111 1111111 111222221111000
Q ss_pred ccCCCCCcHHHHHHHhCCCcchhH-HHHH-HhhcccC----------ccccchhHHHHHHHHHHHHHH--hhhhCC-CCe
Q psy2620 160 DINPQSATTAQLYDKFGLDPNTKD-FTGH-ALALYRD----------DEYINDLAIHTIRRIKLYSDS--LARYGK-SPY 224 (441)
Q Consensus 160 ~~~~~~~s~~~~l~~~~l~~~~~~-~~~~-~~~~~~~----------~~~~~~~~~~~l~~~~~~~~s--~~~~G~-~~~ 224 (441)
......++.+|+.+..- +.+.+ ++.. ....+.. ...+..+..... ....+.. ...++. ..+
T Consensus 138 -~~~~~~s~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 213 (513)
T 4gde_A 138 -ANTKPKTFDEWIVRMMG-TGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAV--TTNVILGKTAGNWGPNATF 213 (513)
T ss_dssp -CCSCCCSHHHHHHHHHH-HHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHH--HHHHHHTCCCCSCBTTBEE
T ss_pred -ccccccCHHHHHHHhhh-hhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhh--hhhhhhcccccccccccce
Confidence 01123678887754311 22222 1111 1111110 001111111110 0111100 001111 123
Q ss_pred e-eecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCC--C----c-ccc-----
Q psy2620 225 L-YPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSY--V----Q-DRV----- 291 (441)
Q Consensus 225 ~-~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~--~----~-~~~----- 291 (441)
. .++||++.++++|++.+...|++|+++++|++|..++++++ ..+|+++.||+||++... + + ...
T Consensus 214 ~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~--~~~G~~~~ad~vI~t~P~~~l~~~l~~~~~~~~~~ 291 (513)
T 4gde_A 214 RFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVT--LQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTK 291 (513)
T ss_dssp EEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEE--ETTSCEEEEEEEEECSCHHHHHHHTTCHHHHHHHT
T ss_pred eecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCEEE--EcCCCEEECCEEEECCCHHHHHHhcCchhhHhhhh
Confidence 3 45799999999999999999999999999999988777642 347899999999997642 1 1 100
Q ss_pred -ccccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEEEEE-ecCCccccCCCeEEE
Q psy2620 292 -KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIYVSL-VSYTHQVSAKGWFIA 351 (441)
Q Consensus 292 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~-~~~~~~~~p~g~~~~ 351 (441)
..+.++.-+.+.++..... ......++.+|+.+..- .. +.. .+++...+|.+...+
T Consensus 292 ~l~y~~~~~v~l~~~~~~~~-~~~~~~~~y~~~~~~~f-~R--i~~~~n~sp~~~p~~~~~~ 349 (513)
T 4gde_A 292 QLFYSSTHVIGVGVRGSRPE-RIGDKCWLYFPEDNCPF-YR--ATIFSNYSPYNQPEASAAL 349 (513)
T ss_dssp TCCEEEEEEEEEEEESSCCT-TTTTCCEEECCSTTCSC-SE--EECGGGTCGGGSCCTTCCE
T ss_pred cccCCceEEEEEEEeccccc-cccccceeeccCCCCce-eE--EEecCCCCcccCCCCCceE
Confidence 1123444455666654321 12345677777643210 11 222 244556677776543
No 10
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.84 E-value=2.4e-19 Score=182.50 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=149.0
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccce
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKF 80 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~ 80 (441)
|.+.+||+|||||++||+||++|+++|++|+|||+++++||+++|.. .. .+.++.++++
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~--------------------g~~~~~g~~~ 68 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QD--------------------GLIWDEGANT 68 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ET--------------------TEEEESSCCC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cC--------------------CeEEecCCcc
Confidence 44568999999999999999999999999999999999999998877 32 2456777777
Q ss_pred eecC-chHHHHHHHhCCcceeEEEEec-ceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCcccc
Q psy2620 81 LMAN-GSLVKLLIHTGVTRYLEFKSVE-GSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTW 158 (441)
Q Consensus 81 l~~~-~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~ 158 (441)
+... ..+.+++.+.|+...+.+.... ..+.+.+|+.+.+|.+....+...+.+..++.. .+........ ..+.
T Consensus 69 ~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~-- 143 (504)
T 1sez_A 69 MTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQ--MLLEPILWKN-KKLS-- 143 (504)
T ss_dssp BCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHH--HHTHHHHC---------
T ss_pred cccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHH--HhHhhhccCc-cccc--
Confidence 7643 4677888899987665543322 235667888888888754444334444433221 1111110000 0000
Q ss_pred cccCCCCCcHHHHHHHhCCCcchhHHHHHHh-hcccCccccchhHHHHHHHHH-----------HHHHH-hhhh------
Q psy2620 159 KDINPQSATTAQLYDKFGLDPNTKDFTGHAL-ALYRDDEYINDLAIHTIRRIK-----------LYSDS-LARY------ 219 (441)
Q Consensus 159 ~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-----------~~~~s-~~~~------ 219 (441)
. ......++.+|+++..-++.+..++.... ..+..+.. .-+....+..+. ..+.. +...
T Consensus 144 ~-~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (504)
T 1sez_A 144 Q-VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPD-SLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQG 221 (504)
T ss_dssp -----CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSCCGG-GSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--------
T ss_pred c-cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCCChH-HhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccccc
Confidence 0 01134899999976522222223332211 11111110 001111111000 01100 0000
Q ss_pred ---------CCCCeeeecCCcchHHHHHHHHHHHcC-cEEEcccceeEEEEeCCE-----EEEEEe---CC---eEEEcC
Q psy2620 220 ---------GKSPYLYPMYGLGELPQSFARLSAIYG-GTYMLDKPVDEIVIENGK-----VVGVRS---GT---EIARCK 278 (441)
Q Consensus 220 ---------G~~~~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~~~-----~~~v~~---~g---~~~~a~ 278 (441)
....+.+++||++.|+++|++. .| ++|+++++|++|..++++ .+.|.+ +| ++++||
T Consensus 222 ~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~---l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad 298 (504)
T 1sez_A 222 PPKTSANKKRQRGSFSFLGGMQTLTDAICKD---LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD 298 (504)
T ss_dssp --CCCSCCSTTCSCBEETTCTHHHHHHHHTT---SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEES
T ss_pred ccchhhccccCCceEeeCcHHHHHHHHHHhh---cccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECC
Confidence 0124678899999999999763 45 789999999999987665 244543 35 578999
Q ss_pred EEEECCC
Q psy2620 279 QVYCDPS 285 (441)
Q Consensus 279 ~vI~~~~ 285 (441)
+||++.+
T Consensus 299 ~VI~a~p 305 (504)
T 1sez_A 299 AVIMTAP 305 (504)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999764
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.83 E-value=5.6e-20 Score=185.24 Aligned_cols=332 Identities=11% Similarity=0.125 Sum_probs=179.1
Q ss_pred CCC-cccEEEECCChhHHHHHhhhccCC------CeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCcee
Q psy2620 1 MDE-EYDAIVLGTGLKECILSGMLSVSG------KKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWN 73 (441)
Q Consensus 1 m~~-~~DVvIIGaG~~Gl~aA~~La~~G------~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~ 73 (441)
|+. ++||+|||||++||+||++|+++| ++|+|||+++++||+++|.. .. .+.
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~--------------------g~~ 59 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KD--------------------GYI 59 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CT--------------------TCC
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cC--------------------CEE
Confidence 443 489999999999999999999999 99999999999999999877 22 245
Q ss_pred eecccceeecC-chHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCCh--------HHHhhhccCChHHHHHHHHHH
Q psy2620 74 VDLIPKFLMAN-GSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQ--------KEALASDLMGLFEKRRFRNFL 144 (441)
Q Consensus 74 idl~p~~l~~~-~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~--------~~~~~~~~~~~~~k~~l~~~~ 144 (441)
++.+++++... ..+.+++.+.|+...+........+++.+|+...+|... ...+...+.+..++. ....
T Consensus 60 ~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~ 137 (470)
T 3i6d_A 60 IERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKA--RAAM 137 (470)
T ss_dssp EESSCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSH--HHHH
T ss_pred eccChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHH--HHhc
Confidence 67777665543 467788889988765542213334566677777766532 011111111111111 1111
Q ss_pred HHHHhhcccCcccccccCCCCCcHHHHHHHhCCCcchhHHHHHHh-hcccCc-cccchhHHHHHHHH-------HHHHHH
Q psy2620 145 VYIQEFSEADPKTWKDINPQSATTAQLYDKFGLDPNTKDFTGHAL-ALYRDD-EYINDLAIHTIRRI-------KLYSDS 215 (441)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~l~~~-------~~~~~s 215 (441)
... ... .......++.+|+++..-.+....++.... ..+..+ ..+ +....+..+ ......
T Consensus 138 ~~~---~~~------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~ 206 (470)
T 3i6d_A 138 DFI---LPA------SKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKL--SLMSTFPQFYQTEQKHRSLILG 206 (470)
T ss_dssp HHH---SCC------CSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTB--BHHHHCGGGCC-----------
T ss_pred Ccc---cCC------CCCCCCcCHHHHHHHhcCHHHHHHhccchhcEEecCCHHHh--hHHHHHHHHHHHHHhcCcHHHH
Confidence 111 100 011245789999987532222222222211 122111 000 000000000 000000
Q ss_pred hh------------hhCCCCeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEE
Q psy2620 216 LA------------RYGKSPYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYC 282 (441)
Q Consensus 216 ~~------------~~G~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~ 282 (441)
+. .-....+.++.||++.++++|++.+.. ++|+++++|++|..++++ +.|.+ +|+++.||+||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vi~ 283 (470)
T 3i6d_A 207 MKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-YSLELDNGVTLDADSVIV 283 (470)
T ss_dssp --------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-EEEEESSSCEEEESEEEE
T ss_pred HHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-EEEEECCCCEEECCEEEE
Confidence 00 000236788999999999999876543 799999999999987666 44665 677899999998
Q ss_pred CCCCCc------c-c----c--ccccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEE-EEEec-CCccccCCC
Q psy2620 283 DPSYVQ------D-R----V--KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIY-VSLVS-YTHQVSAKG 347 (441)
Q Consensus 283 ~~~~~~------~-~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~-~~~~~-~~~~~~p~g 347 (441)
+.+... . . + ...+.+.++++.++++. +........+++|..+. ..+. +...+ .....+|.|
T Consensus 284 a~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~~~~~~~g~l~~~~~~---~~~~~~~~~s~~~~~~~p~~ 359 (470)
T 3i6d_A 284 TAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGS-VQMEHEGTGFVISRNSD---FAITACTWTNKKWPHAAPEG 359 (470)
T ss_dssp CSCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESSTT-CCCSSCSSEEEECSTTC---CSEEEEEEHHHHCGGGSCTT
T ss_pred CCCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECchh-cCCCCCCeEEEccCCCC---CCceEEEEEcCcCCCcCCCC
Confidence 765321 0 0 1 12466788888898764 32223344566665421 1111 11112 123457878
Q ss_pred eEEEEEEeecc------CCChhhchHHHHhhc
Q psy2620 348 WFIAMVSTTVE------TDNPELEIKPGLDLL 373 (441)
Q Consensus 348 ~~~~~i~t~~~------~~d~~~~l~~~l~~l 373 (441)
..++....... ..++++.++.+++.|
T Consensus 360 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (470)
T 3i6d_A 360 KTLLRAYVGKAGDESIVDLSDNDIINIVLEDL 391 (470)
T ss_dssp CEEEEEEECCSSCCGGGTSCHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCCccccCCCHHHHHHHHHHHH
Confidence 76554432111 124454555555555
No 12
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.83 E-value=3e-19 Score=182.54 Aligned_cols=271 Identities=18% Similarity=0.231 Sum_probs=165.2
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccce
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKF 80 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~ 80 (441)
|+..+||||||||++||+||++|+++|++|+|||+++++||+++|.. .. + .+.+|+++++
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~-~~---~----------------g~~~d~G~~~ 60 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLR-NQ---K----------------VKYVDLGGSY 60 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEC-CT---T----------------TSCEESSCCE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecc-cC---C----------------CcccccCceE
Confidence 77789999999999999999999999999999999999999998877 21 0 2356777777
Q ss_pred eecC-chHHHHHHHhCCcceeEEEEecc-eEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCc--c
Q psy2620 81 LMAN-GSLVKLLIHTGVTRYLEFKSVEG-SYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADP--K 156 (441)
Q Consensus 81 l~~~-~~~~~~l~~~~~~~~l~~~~~~~-~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~--~ 156 (441)
+... ..+.+++.+.++..... ..+. .+.+.+|+.+..+... .......+...+.+++.....+....+ .
T Consensus 61 ~~~~~~~~~~l~~~lgl~~~~~--~~~~~~~~~~~g~~~~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (520)
T 1s3e_A 61 VGPTQNRILRLAKELGLETYKV--NEVERLIHHVKGKSYPFRGPF-----PPVWNPITYLDHNNFWRTMDDMGREIPSDA 133 (520)
T ss_dssp ECTTCHHHHHHHHHTTCCEEEC--CCSSEEEEEETTEEEEECSSS-----CCCCSHHHHHHHHHHHHHHHHHHTTSCTTC
T ss_pred ecCCcHHHHHHHHHcCCcceec--ccCCceEEEECCEEEEecCCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCcCC
Confidence 6544 35677888888754321 1122 2344566655543220 000112222333344433333221100 0
Q ss_pred cccc---cCCCCCcHHHHHHHhCCCcchhHHHHHHhh-cccCccccchhHHHHHHHHHHHHHHhhh----h---CCCCee
Q psy2620 157 TWKD---INPQSATTAQLYDKFGLDPNTKDFTGHALA-LYRDDEYINDLAIHTIRRIKLYSDSLAR----Y---GKSPYL 225 (441)
Q Consensus 157 ~~~~---~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~s~~~----~---G~~~~~ 225 (441)
.+.. ......++.+|+++.+.++.++.++..... .+..+ ...-+....+ .++...+. + ....+.
T Consensus 134 ~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~s~~~~~----~~~~~~g~~~~~~~~~~~~~~~ 208 (520)
T 1s3e_A 134 PWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAE-THEVSALWFL----WYVKQCGGTTRIISTTNGGQER 208 (520)
T ss_dssp GGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSC-TTTSBHHHHH----HHHHTTTCHHHHHCSTTSTTSE
T ss_pred CccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCC-hHHhHHHHHH----HHHhhcCchhhhcccCCCcceE
Confidence 0110 001357999999998887777666644322 11111 1111221111 12211110 1 223567
Q ss_pred eecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCC-----------ccc---
Q psy2620 226 YPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYV-----------QDR--- 290 (441)
Q Consensus 226 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~-----------~~~--- 290 (441)
++.||++.++++|++.+ |++|+++++|++|..+++++. |.+ +|+++.||+||++.+.. |..
T Consensus 209 ~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~ 284 (520)
T 1s3e_A 209 KFVGGSGQVSERIMDLL---GDRVKLERPVIYIDQTRENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQ 284 (520)
T ss_dssp EETTCTHHHHHHHHHHH---GGGEESSCCEEEEECSSSSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHH
T ss_pred EEeCCHHHHHHHHHHHc---CCcEEcCCeeEEEEECCCeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHH
Confidence 89999999999997654 789999999999988777655 665 67899999999876532 111
Q ss_pred -c--ccccceEEEEEEecCC
Q psy2620 291 -V--KKLNQVIRCICLMDHP 307 (441)
Q Consensus 291 -~--~~~~~~~~~~~~~~~~ 307 (441)
+ ...+.+.|+++.++++
T Consensus 285 ~i~~~~~~~~~kv~l~~~~~ 304 (520)
T 1s3e_A 285 MITRVPLGSVIKCIVYYKEP 304 (520)
T ss_dssp HTTSCCBCCEEEEEEECSSC
T ss_pred HHHhCCCcceEEEEEEeCCC
Confidence 1 1256788999999876
No 13
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.82 E-value=1.5e-19 Score=182.73 Aligned_cols=283 Identities=14% Similarity=0.108 Sum_probs=168.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceee
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLM 82 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~ 82 (441)
+||+|||||++||+||++|+++|+ +|+|||+++++||+++|.. .. ..+.++.+|+.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~-~~-------------------~g~~~d~G~~~~~ 62 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVR-GP-------------------NGAIFELGPRGIR 62 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEE-CT-------------------TSCEEESSCCCBC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEe-cc-------------------CCeEEEeCCCccc
Confidence 699999999999999999999999 9999999999999998865 21 1356777887775
Q ss_pred cC----chHHHHHHHhCCcceeEEEEe-----cceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhccc
Q psy2620 83 AN----GSLVKLLIHTGVTRYLEFKSV-----EGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEA 153 (441)
Q Consensus 83 ~~----~~~~~~l~~~~~~~~l~~~~~-----~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~ 153 (441)
.. ..+.+++.+.++...+..... ...+++.+|+++.+|.+....+. . ...+.+.... .....+...
T Consensus 63 ~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~-~-~~~~~~~~~~---~~~~~~~~~ 137 (477)
T 3nks_A 63 PAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLR-P-SPPFSKPLFW---AGLRELTKP 137 (477)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC----C-CTTSCSCSSH---HHHTTTTSC
T ss_pred CCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhccc-c-cchhhhHHHH---HHHHhhhcC
Confidence 53 245678888888654433221 11356778988888876322211 1 0111110111 111111110
Q ss_pred CcccccccCCCCCcHHHHHHHhCCCcchh-HHHHHHh-hcccCc-cccchhHHHHHHHHHHHHHHh--------------
Q psy2620 154 DPKTWKDINPQSATTAQLYDKFGLDPNTK-DFTGHAL-ALYRDD-EYINDLAIHTIRRIKLYSDSL-------------- 216 (441)
Q Consensus 154 ~~~~~~~~~~~~~s~~~~l~~~~l~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~l~~~~~~~~s~-------------- 216 (441)
. ......++.+|+++.. .+++. .++.... ..+..+ ..+ +....+..+.......
T Consensus 138 --~----~~~~~~s~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l--s~~~~~~~l~~~e~~~gsl~~~~~~~~~~~ 208 (477)
T 3nks_A 138 --R----GKEPDETVHSFAQRRL-GPEVASLAMDSLCRGVFAGNSREL--SIRSCFPSLFQAEQTHRSILLGLLLGAGRT 208 (477)
T ss_dssp --C----CCSSCCBHHHHHHHHH-CHHHHHHTHHHHHHHHHSSCTTTB--BHHHHCHHHHHHHHHHSCHHHHHHHC----
T ss_pred --C----CCCCCcCHHHHHHHhh-CHHHHHHHHHHHhcccccCCHHHh--hHHHHHHHHHHHHHHcCCHHHHHHHhcccc
Confidence 0 0113578999987632 22222 2222111 111111 001 1111111111000000
Q ss_pred ----------hhhCCCCeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCC
Q psy2620 217 ----------ARYGKSPYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSY 286 (441)
Q Consensus 217 ----------~~~G~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~ 286 (441)
......++.+++||++.++++|++.+...|++|+++++|++|..++++++.|.++++++.||+||++.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 209 PQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp -CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCH
T ss_pred cCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCH
Confidence 0112235789999999999999999999999999999999998866554667777778999999997654
Q ss_pred C------cc---c----c--ccccceEEEEEEecCCCCCCCCCCeeEEEecCC
Q psy2620 287 V------QD---R----V--KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQK 324 (441)
Q Consensus 287 ~------~~---~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 324 (441)
+ ++ . + .....+.++++.++++. +. .....+++|+.
T Consensus 289 ~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~-~~--~~~~g~l~~~~ 338 (477)
T 3nks_A 289 SVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAH-LP--VQGFGHLVPSS 338 (477)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTCC-CS--SCSSEEECCTT
T ss_pred HHHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCCC-CC--CCCceEEccCC
Confidence 2 11 1 1 12455677888888753 32 12335556654
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.81 E-value=1.5e-18 Score=175.24 Aligned_cols=287 Identities=12% Similarity=0.143 Sum_probs=171.8
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCC--CeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeeccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSG--KKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIP 78 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G--~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p 78 (441)
|+ ++||+|||||++||+||++|+++| ++|+|||+++++||+++|.. .. | +.++.++
T Consensus 2 m~-~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~----g----------------~~~~~g~ 59 (475)
T 3lov_A 2 MS-SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-ED----G----------------FTIERGP 59 (475)
T ss_dssp CC-SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-ST----T----------------CCEESSC
T ss_pred CC-cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eC----C----------------EEEecCc
Confidence 44 589999999999999999999999 99999999999999998877 32 2 3456667
Q ss_pred ceeecC-chHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCCh--------HHHhhhccCChHHHHHHHHHHHHHHh
Q psy2620 79 KFLMAN-GSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQ--------KEALASDLMGLFEKRRFRNFLVYIQE 149 (441)
Q Consensus 79 ~~l~~~-~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~--------~~~~~~~~~~~~~k~~l~~~~~~~~~ 149 (441)
+++... ..+.+++.+.++...+........+++.+|+...+|... ...+...+++..++. .+......
T Consensus 60 ~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~ 136 (475)
T 3lov_A 60 DSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ---EVADLLLH 136 (475)
T ss_dssp CCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH---HHHHHHHS
T ss_pred hhhhcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH---HhhCcccC
Confidence 665543 467788888888765543223334666788888776532 233334445544433 22222221
Q ss_pred hcccCcccccccCCCCCcHHHHHHHhCCCcchh-HHHHHHh-hcccCc-cccch-hHHHHHHHHH----HHHHHhhhh--
Q psy2620 150 FSEADPKTWKDINPQSATTAQLYDKFGLDPNTK-DFTGHAL-ALYRDD-EYIND-LAIHTIRRIK----LYSDSLARY-- 219 (441)
Q Consensus 150 ~~~~~~~~~~~~~~~~~s~~~~l~~~~l~~~~~-~~~~~~~-~~~~~~-~~~~~-~~~~~l~~~~----~~~~s~~~~-- 219 (441)
... ... ......++.+|+++..- +++. .++.... ..+..+ ..++. .....+..+. .+...+...
T Consensus 137 ~~~---~~~--~~~~~~s~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~ 210 (475)
T 3lov_A 137 PSD---SLR--IPEQDIPLGEYLRPRLG-DALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRP 210 (475)
T ss_dssp CCT---TCC--CCSSCCBHHHHHHHHHC-HHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC
T ss_pred Ccc---ccc--CCCCCcCHHHHHHHHhC-HHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcc
Confidence 110 000 01245789999976422 3332 2322222 122111 00110 0000111100 011111000
Q ss_pred -------------CCCCeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCC
Q psy2620 220 -------------GKSPYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPS 285 (441)
Q Consensus 220 -------------G~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~ 285 (441)
....+.++.||++.++++|++.+.. ++|+++++|++|..+++++ .|++ +| ++.||+||++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~-~v~~~~g-~~~ad~vV~a~p 286 (475)
T 3lov_A 211 LDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISREDGRY-RLKTDHG-PEYADYVLLTIP 286 (475)
T ss_dssp --------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTEE-EEECTTC-CEEESEEEECSC
T ss_pred cccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEE-EEEECCC-eEECCEEEECCC
Confidence 1346889999999999999876644 7999999999999887764 4666 56 899999999765
Q ss_pred CCc-ccc-----------ccccceEEEEEEecCCCCCCCCCCeeEEEecCC
Q psy2620 286 YVQ-DRV-----------KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQK 324 (441)
Q Consensus 286 ~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 324 (441)
.+. ..+ ...+.+.++++.++++. .. ...+..+++|+.
T Consensus 287 ~~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~-~~~g~g~l~~~~ 335 (475)
T 3lov_A 287 HPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQ-SL-PIEGTGFVVNRR 335 (475)
T ss_dssp HHHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCS-SC-SSSSSEEEECTT
T ss_pred HHHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcC-CC-CCCCEEEEecCC
Confidence 432 111 12456788889998875 21 223445666654
No 15
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.81 E-value=3e-19 Score=181.40 Aligned_cols=271 Identities=13% Similarity=0.134 Sum_probs=163.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeecC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMAN 84 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~~ 84 (441)
+||+|||||++||+||++|+++|++|+|||+++++||+++|.+ .. .+.+|++++++...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~--------------------g~~~d~G~~~~~~~ 98 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-ID--------------------GYPYEMGGTWVHWH 98 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ET--------------------TEEEECSCCCBCTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cC--------------------CeeecCCCeEecCc
Confidence 8999999999999999999999999999999999999999877 33 35678888877643
Q ss_pred -chHHHHHHHhCCcceeEEEE--e--cceEEEeC--CeEEeCCCChHHHhhhccCChHHHHHHHHHHH----HHHhhccc
Q psy2620 85 -GSLVKLLIHTGVTRYLEFKS--V--EGSYVFKG--GKISKVPVDQKEALASDLMGLFEKRRFRNFLV----YIQEFSEA 153 (441)
Q Consensus 85 -~~~~~~l~~~~~~~~l~~~~--~--~~~~~~~~--g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~----~~~~~~~~ 153 (441)
..+.+++.+.|+...+.... . ...+++.+ |....+|... .. . .+ ...+.+|++ ....+...
T Consensus 99 ~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-~----~~-~~~~~~~~~~~~~~~~~~~~~ 170 (495)
T 2vvm_A 99 QSHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA--ED-E----LL-RSALHKFTNVDGTNGRTVLPF 170 (495)
T ss_dssp SHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH--HH-H----HH-HHHHHHHHCSSSSTTTTTCSC
T ss_pred cHHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHH--HH-H----HH-HHHHHHHHccchhhhhhcCCC
Confidence 46778888888765444332 1 12344554 5544444321 10 0 00 111222222 11111000
Q ss_pred Ccc-----cccccCCCCCcHHHHHHHhC--CCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhh-hCCCCee
Q psy2620 154 DPK-----TWKDINPQSATTAQLYDKFG--LDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLAR-YGKSPYL 225 (441)
Q Consensus 154 ~~~-----~~~~~~~~~~s~~~~l~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~-~G~~~~~ 225 (441)
... .+..+ ...++.+|+++++ +++..+.++...+...........+....+..+......... .....+.
T Consensus 171 ~~~~~~~~~~~~~--~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (495)
T 2vvm_A 171 PHDMFYVPEFRKY--DEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSY 248 (495)
T ss_dssp TTSTTSSTTHHHH--HTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSE
T ss_pred CCCcccCcchhhh--hhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceE
Confidence 000 00011 2478999999887 777666666443332211111111222221111100000000 0111345
Q ss_pred eecCCcchHHHHHHHHHHHcC-cEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCC-----------ccc--
Q psy2620 226 YPMYGLGELPQSFARLSAIYG-GTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYV-----------QDR-- 290 (441)
Q Consensus 226 ~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~-----------~~~-- 290 (441)
++.||++.++++|.+.+...| ++|+++++|++|..+++.+ .|.+ +|++++||+||++.+.. |..
T Consensus 249 ~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~ 327 (495)
T 2vvm_A 249 KFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERI 327 (495)
T ss_dssp EETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHH
T ss_pred EeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHH
Confidence 789999999999999999998 9999999999998766654 4655 56789999999977642 111
Q ss_pred --c--ccccceEEEEEEecCC
Q psy2620 291 --V--KKLNQVIRCICLMDHP 307 (441)
Q Consensus 291 --~--~~~~~~~~~~~~~~~~ 307 (441)
+ ...+.+.++++.++++
T Consensus 328 ~ai~~~~~~~~~kv~l~~~~~ 348 (495)
T 2vvm_A 328 SAMQAGHVSMCTKVHAEVDNK 348 (495)
T ss_dssp HHHHHCCCCCCEEEEEEESCG
T ss_pred HHHHhcCCCceeEEEEEECCc
Confidence 0 1245678899888875
No 16
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.80 E-value=8.7e-19 Score=175.91 Aligned_cols=271 Identities=15% Similarity=0.183 Sum_probs=158.6
Q ss_pred CC-CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccc
Q psy2620 1 MD-EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPK 79 (441)
Q Consensus 1 m~-~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~ 79 (441)
|+ .++||||||||++||+||++|+++|++|+|||+++++||++++.. .. + +.++.+++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~----g----------------~~~~~g~~ 59 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT-ID----G----------------AVLEIGGQ 59 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE-ET----T----------------EEEECSCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc-cC----C----------------ceeccCCe
Confidence 44 468999999999999999999999999999999999999998876 22 2 34566666
Q ss_pred eeecC-chHHHHHHHhCCcceeEEEEecceE-EEeC-CeEEeCCCChHHHhhhccCChHHHHHHHHHHH----HHHhhcc
Q psy2620 80 FLMAN-GSLVKLLIHTGVTRYLEFKSVEGSY-VFKG-GKISKVPVDQKEALASDLMGLFEKRRFRNFLV----YIQEFSE 152 (441)
Q Consensus 80 ~l~~~-~~~~~~l~~~~~~~~l~~~~~~~~~-~~~~-g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~----~~~~~~~ 152 (441)
++... ..+.+++.+.++..+..+. +... .+.+ |+...+..... .........+.+++. ....+..
T Consensus 60 ~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (453)
T 2yg5_A 60 WVSPDQTALISLLDELGLKTFERYR--EGESVYISSAGERTRYTGDSF------PTNETTKKEMDRLIDEMDDLAAQIGA 131 (453)
T ss_dssp CBCTTCHHHHHHHHHTTCCEEECCC--CSEEEEECTTSCEEEECSSSC------SCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred EecCccHHHHHHHHHcCCccccccc--CCCEEEEeCCCceeeccCCCC------CCChhhHHHHHHHHHHHHHHHhhcCC
Confidence 65433 4567788888875433221 2222 2222 54443321100 000111111222221 1111111
Q ss_pred cCccccc-ccCCCCCcHHHHHHHhCCCcchhHHHHHHhhcc-cCccccchhHHHHHHHHHHHHHHhhhh------CCCCe
Q psy2620 153 ADPKTWK-DINPQSATTAQLYDKFGLDPNTKDFTGHALALY-RDDEYINDLAIHTIRRIKLYSDSLARY------GKSPY 224 (441)
Q Consensus 153 ~~~~~~~-~~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~s~~~~------G~~~~ 224 (441)
..+.... .......++.+|+++++.++.++.++....... ..+....-+....+. ++...+.+ ....+
T Consensus 132 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~~~~~g~~~~~~~~~~~~~ 207 (453)
T 2yg5_A 132 EEPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVL----MAASAGSFSHLVDEDFILD 207 (453)
T ss_dssp SCGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHH----HHHHTTCHHHHHCHHHHTC
T ss_pred CCCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHH----HhccCCcHhhhccCCCcce
Confidence 1111000 000125799999999888777777665443221 111100112221111 11111100 01235
Q ss_pred eeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCC-----------ccc---
Q psy2620 225 LYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYV-----------QDR--- 290 (441)
Q Consensus 225 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~-----------~~~--- 290 (441)
.++.||++.++++|++. .|++|+++++|++|..++++.+.|+++|+++.||+||++.+.. |..
T Consensus 208 ~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~~~~~v~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~ 284 (453)
T 2yg5_A 208 KRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQ 284 (453)
T ss_dssp EEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEETTEEEEEETTTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHH
T ss_pred EEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEeCCceEEEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHH
Confidence 78999999999999765 4789999999999998877634477788899999999876542 111
Q ss_pred -cc--cccceEEEEEEecCC
Q psy2620 291 -VK--KLNQVIRCICLMDHP 307 (441)
Q Consensus 291 -~~--~~~~~~~~~~~~~~~ 307 (441)
+. ..+.+.|+++.++++
T Consensus 285 ~i~~~~~~~~~kv~l~~~~~ 304 (453)
T 2yg5_A 285 MHQHQSLGLVIKVHAVYETP 304 (453)
T ss_dssp HGGGEEECCEEEEEEEESSC
T ss_pred HHhcCCCcceEEEEEEECCC
Confidence 11 145678899989876
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.73 E-value=2.4e-16 Score=159.25 Aligned_cols=373 Identities=11% Similarity=0.091 Sum_probs=203.6
Q ss_pred CcccEEEECCChhHHHHHhhhccCC-CeEEEEcCCCCCCCccccc-CchHHHhhhhCCCCCCccccCCCCceeeecccce
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSG-KKVLHIDRNKYYGGESASI-TPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKF 80 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~-~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~ 80 (441)
..+||+|||||++||+||++|+++| ++|+|+|+++++||.+++. . .. .+.++.++++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~-~~--------------------g~~~~~g~~~ 66 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLD-EN--------------------GFTWDLGGHV 66 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEEC-TT--------------------SCEEESSCCC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeec-CC--------------------CcEEeeCCcc
Confidence 3589999999999999999999999 8999999999999999885 3 11 3456777777
Q ss_pred eecCc-hHHHHHHHhCCcceeEEEEe-cceEEEeCCeEEeCCCChHHHhhhccCChHHH-HHHHHHHHHHHhhcccCccc
Q psy2620 81 LMANG-SLVKLLIHTGVTRYLEFKSV-EGSYVFKGGKISKVPVDQKEALASDLMGLFEK-RRFRNFLVYIQEFSEADPKT 157 (441)
Q Consensus 81 l~~~~-~~~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k-~~l~~~~~~~~~~~~~~~~~ 157 (441)
+.... .+.+++.+.. .+ +... ...+++.+|+++.+|.+.. + ..+....+ +.+..++..... .+
T Consensus 67 ~~~~~~~~~~l~~~~~-~~---~~~~~~~~~~~~~g~~~~~P~~~~--~--~~l~~~~~~~~~~~ll~~~~~----~~-- 132 (484)
T 4dsg_A 67 IFSHYQYFDDVMDWAV-QG---WNVLQRESWVWVRGRWVPYPFQNN--I--HRLPEQDRKRCLDELVRSHAR----TY-- 132 (484)
T ss_dssp BCCSBHHHHHHHHHHC-SC---EEEEECCCEEEETTEEEESSGGGC--G--GGSCHHHHHHHHHHHHHHHHC----CC--
T ss_pred cccChHHHHHHHHHHh-hh---hhhccCceEEEECCEEEEeCccch--h--hhCCHHHHHHHHHHHHHHHhc----cC--
Confidence 76554 4556666643 22 2222 2235667899988884311 1 11221111 122222222111 00
Q ss_pred ccccCCCCCcHHHHHHHhCCCcchhH-HHHHH-hhcccCc----------cccchhHHHHHHHHHHHHHHhhh--hC-CC
Q psy2620 158 WKDINPQSATTAQLYDKFGLDPNTKD-FTGHA-LALYRDD----------EYINDLAIHTIRRIKLYSDSLAR--YG-KS 222 (441)
Q Consensus 158 ~~~~~~~~~s~~~~l~~~~l~~~~~~-~~~~~-~~~~~~~----------~~~~~~~~~~l~~~~~~~~s~~~--~G-~~ 222 (441)
.....++.+|+.+. +.+.+.+ ++... -..+..+ ..+..+....+ +...+..... ++ ..
T Consensus 133 ----~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~--~~~~~~~~~~~~~~~~~ 205 (484)
T 4dsg_A 133 ----TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERI--RRNIQENRDDLGWGPNA 205 (484)
T ss_dssp ----SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHH--HHHHHHTCCCCCCSTTS
T ss_pred ----CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHH--HHHHhhcccccCCCccc
Confidence 11357899988754 1121111 11100 1111100 00011101111 1111110000 11 12
Q ss_pred Ceeeec-CCcchHHHHHHHHHHHcCcEEEcc--cceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCC------------
Q psy2620 223 PYLYPM-YGLGELPQSFARLSAIYGGTYMLD--KPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYV------------ 287 (441)
Q Consensus 223 ~~~~~~-gG~~~l~~~l~~~~~~~G~~i~~~--~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~------------ 287 (441)
.|.||. ||++.++++|++.+... +|+++ ++|++|..+++++. ..+|+++.||+||++....
T Consensus 206 ~f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~ 281 (484)
T 4dsg_A 206 TFRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFK 281 (484)
T ss_dssp EEEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCT
T ss_pred eEEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCC
Confidence 467776 89999999998866432 78999 56999987776532 2467889999999976431
Q ss_pred -cccc------ccccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEEEEE-ecCCccccCCCeEEEEEEeecc-
Q psy2620 288 -QDRV------KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIYVSL-VSYTHQVSAKGWFIAMVSTTVE- 358 (441)
Q Consensus 288 -~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~-~~~~~~~~p~g~~~~~i~t~~~- 358 (441)
++.. ..+.++..+.+.++++... ......++++|+.+.. ...+.. .++....+|.|+.++++.....
T Consensus 282 ~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~~~~~~i~vp~~~~~---~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~ 357 (484)
T 4dsg_A 282 GYDEWPAIADKMVYSSTNVIGIGVKGTPPP-HLKTACWLYFPEDTSP---FYRATVFSNYSKYNVPEGHWSLMLEVSESK 357 (484)
T ss_dssp TGGGHHHHHHHCCEEEEEEEEEEEESCCCG-GGTTCCEEECCSTTCS---CSEEECGGGTCGGGSCTTEEEEEEEEEEBT
T ss_pred CCHHHHHHHhCCCcCceEEEEEEEcCCCcc-cCCCCeEEEEEcCCCe---EEEEEeecCCCcccCCCCeEEEEEEEecCc
Confidence 1111 1245678888888876321 1124567788865421 111222 3455677899988766543321
Q ss_pred --CCChhhchHHHHhhcc-----cccceee--------eeeeccccCCCC---------CCCceeeccC---CCCC-CCh
Q psy2620 359 --TDNPELEIKPGLDLLG-----SYKKKFV--------TVSDYYEPTDLG---------TESQIFISTS---YDAT-THF 410 (441)
Q Consensus 359 --~~d~~~~l~~~l~~l~-----p~~~~~~--------~~~~~~~p~~~g---------~~~~~~~~~~---~~~~-~~~ 410 (441)
..|.++.++.+++.|. .++..+. ..+.+|.+-... ...|++++.. |... ..-
T Consensus 358 ~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~~l~~~Gr~g~~~y~v~~~ 437 (484)
T 4dsg_A 358 YKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSRCIYSRGRFGAWRYEVGNQ 437 (484)
T ss_dssp TBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCGGGCSH
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhCCcEeecCCcccccCCCCh
Confidence 2355667777777662 1121111 112344432100 0117777765 4321 134
Q ss_pred HhHHHHHHHHHhhcc
Q psy2620 411 ETVCTDVVNLFKRGT 425 (441)
Q Consensus 411 ~~~~~~v~~~~~~~~ 425 (441)
+..+...++..+++.
T Consensus 438 d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 438 DHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777777776
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.73 E-value=5.7e-17 Score=161.19 Aligned_cols=247 Identities=11% Similarity=0.090 Sum_probs=139.1
Q ss_pred CCcccEEEECCChhHHHHHhhhccCC-CeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccce
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSG-KKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKF 80 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~ 80 (441)
+..+||+|||||++||+||++|+++| ++|+|+|+++++||+++|.+ .. |+ .+|.++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~----G~----------------~~d~G~~~ 62 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YH----GR----------------RYEMGAIM 62 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ET----TE----------------ECCSSCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CC----Cc----------------ccccCcee
Confidence 36789999999999999999999999 99999999999999999887 33 33 44556665
Q ss_pred eecC-chHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHh-hcccCc-cc
Q psy2620 81 LMAN-GSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQE-FSEADP-KT 157 (441)
Q Consensus 81 l~~~-~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~-~~~~~~-~~ 157 (441)
+... ..+.+++.+.|+... .......+.+.+|+.. .+........ .....+.++...... +..... ..
T Consensus 63 ~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~~~g~~~-~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 133 (424)
T 2b9w_A 63 GVPSYDTIQEIMDRTGDKVD--GPKLRREFLHEDGEIY-VPEKDPVRGP------QVMAAVQKLGQLLATKYQGYDANGH 133 (424)
T ss_dssp BCTTCHHHHHHHHHHCCCCC--SCCCCEEEECTTSCEE-CGGGCTTHHH------HHHHHHHHHHHHHHTTTTTTTSSSS
T ss_pred ecCCcHHHHHHHHHhCCccc--cccccceeEcCCCCEe-ccccCcccch------hHHHHHHHHHHHHhhhhhhcccccc
Confidence 5443 456677888776421 0111112334556543 2211000000 001122333332222 111000 00
Q ss_pred ccc-cCCCCCcHHHHHHHhCCCcchhHHHHHH-hhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCCcchHH
Q psy2620 158 WKD-INPQSATTAQLYDKFGLDPNTKDFTGHA-LALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYGLGELP 235 (441)
Q Consensus 158 ~~~-~~~~~~s~~~~l~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG~~~l~ 235 (441)
+.. ......++.+|+++.+.+. +.+.+... +..... .....|....+..+... ..+...+ ++...+.+|+++++
T Consensus 134 ~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~-~~~~~~~-~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 134 YNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFV-TMMSFAK-GDLWTWADGTQAMF 209 (424)
T ss_dssp SSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHH-HHHHHHH-TCCBCCTTCHHHHH
T ss_pred hhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHh-hhhcccC-CceEEeCChHHHHH
Confidence 100 0112479999999887753 44332111 111111 11122332222111110 0111111 23346789999999
Q ss_pred HHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCC
Q psy2620 236 QSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSY 286 (441)
Q Consensus 236 ~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~ 286 (441)
++|.+. .+.+|+++++|++|..+++++. |.+++.++.||+||++.+.
T Consensus 210 ~~l~~~---l~~~v~~~~~V~~i~~~~~~v~-v~~~~g~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 210 EHLNAT---LEHPAERNVDITRITREDGKVH-IHTTDWDRESDVLVLTVPL 256 (424)
T ss_dssp HHHHHH---SSSCCBCSCCEEEEECCTTCEE-EEESSCEEEESEEEECSCH
T ss_pred HHHHHh---hcceEEcCCEEEEEEEECCEEE-EEECCCeEEcCEEEECCCH
Confidence 999654 4668999999999988777654 7765445999999997654
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.71 E-value=9.7e-17 Score=159.84 Aligned_cols=265 Identities=16% Similarity=0.103 Sum_probs=147.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeecC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMAN 84 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~~ 84 (441)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.+ .. . .-.+.+++++.++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~-~~-----c------------ipg~~~~~g~~~~~~~ 63 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRE-SR-----N------------VPGLRVEIGGAYLHRK 63 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEE-CS-----S------------STTCEEESSCCCBCTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeeccee-cc-----C------------CCCceEecCCeeeCCC
Confidence 7999999999999999999999999999999999999998765 11 0 0023456666666543
Q ss_pred --chHHHHHHHhCCcceeEEEEecceEE--EeCCeEEeC-CCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccccc
Q psy2620 85 --GSLVKLLIHTGVTRYLEFKSVEGSYV--FKGGKISKV-PVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWK 159 (441)
Q Consensus 85 --~~~~~~l~~~~~~~~l~~~~~~~~~~--~~~g~~~~~-p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~ 159 (441)
..+.+.+.+.++..... ....... ..++.+... +.. .+... .-...+.++......+....+....
T Consensus 64 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 134 (431)
T 3k7m_X 64 HHPRLAAELDRYGIPTAAA--SEFTSFRHRLGPTAVDQAFPIP-GSEAV------AVEAATYTLLRDAHRIDLEKGLENQ 134 (431)
T ss_dssp TCHHHHHHHHHHTCCEEEC--CCCCEECCBSCTTCCSSSSCCC-GGGHH------HHHHHHHHHHHHHTTCCTTTCTTSS
T ss_pred CcHHHHHHHHHhCCeeeec--CCCCcEEEEecCCeecCCCCCC-HHHHH------HHHHHHHHHHHHHHhcCCCCCccCc
Confidence 35566777777642111 1111111 122222111 011 01110 1123344455554443222111100
Q ss_pred c-cCCCCCcHHHHHHHhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhh------hhCCCCeeeecCCcc
Q psy2620 160 D-INPQSATTAQLYDKFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLA------RYGKSPYLYPMYGLG 232 (441)
Q Consensus 160 ~-~~~~~~s~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~------~~G~~~~~~~~gG~~ 232 (441)
. ...+ .++.+++...+.++....++..............-+.... ..++...+ ..+ ... .+.+|+.
T Consensus 135 ~~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~-~~~-~~~~g~~ 207 (431)
T 3k7m_X 135 DLEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWM----LQLVAAHHYSILGVVLS-LDE-VFSNGSA 207 (431)
T ss_dssp SCGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHH----HHHHHHTTSCHHHHHHT-CCE-EETTCTH
T ss_pred chhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHH----HHHHHhcCCccceeecc-hhh-hcCCcHH
Confidence 0 0112 7889999988887666555433222111111000111111 11111110 111 122 6789999
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCC--------Ccc---c----c--ccc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSY--------VQD---R----V--KKL 294 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~--------~~~---~----~--~~~ 294 (441)
.+++++. +..| +|+++++|++|..+++++. |.+ +|++++||+||++.+. -|+ . + ...
T Consensus 208 ~l~~~~~---~~~g-~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~ 282 (431)
T 3k7m_X 208 DLVDAMS---QEIP-EIRLQTVVTGIDQSGDVVN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHG 282 (431)
T ss_dssp HHHHHHH---TTCS-CEESSCCEEEEECSSSSEE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCC
T ss_pred HHHHHHH---hhCC-ceEeCCEEEEEEEcCCeEE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCC
Confidence 9988875 3456 9999999999987666654 665 6777999999998762 221 0 1 124
Q ss_pred cceEEEEEEecCCC
Q psy2620 295 NQVIRCICLMDHPI 308 (441)
Q Consensus 295 ~~~~~~~~~~~~~~ 308 (441)
+...|+++.++.+.
T Consensus 283 ~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 283 GQGLKILIHVRGAE 296 (431)
T ss_dssp CCEEEEEEEEESCC
T ss_pred cceEEEEEEECCCC
Confidence 56688888887663
No 20
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.67 E-value=1.8e-15 Score=153.27 Aligned_cols=284 Identities=11% Similarity=0.058 Sum_probs=146.3
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCC-CCCCccccCCCCceeeecccce
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGS-TLPDEVTFGRGRDWNVDLIPKF 80 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~-d~p~~~~~g~~~~~~idl~p~~ 80 (441)
++.+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. ... .+.. ..+.. .......+.++.++..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~-~~~---~~~~~~~~~~-~~~~~~~~~~~~g~~~ 83 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTAR-GGS---EETDLSGETQ-KCTFSEGHFYNVGATR 83 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEE-TTC---EEECTTSCEE-ECCCCTTCEEESSCCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeec-cCc---ccccccchhh-hhcccCCCcCCcchhh
Confidence 4568999999999999999999999999999999999999988765 210 0000 00000 0011123456777766
Q ss_pred eecCchHHHHHHHhCCcceeEEEEec-ceEEE-eC-----CeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhccc
Q psy2620 81 LMANGSLVKLLIHTGVTRYLEFKSVE-GSYVF-KG-----GKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEA 153 (441)
Q Consensus 81 l~~~~~~~~~l~~~~~~~~l~~~~~~-~~~~~-~~-----g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~ 153 (441)
+.....+.+++.+.|+... .+.... ..+++ .+ |.....+... ..+. . .+..++.........
T Consensus 84 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-------~--~~~~l~~~~~~~~~~ 152 (489)
T 2jae_A 84 IPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAK-ADTF-------G--YMSELLKKATDQGAL 152 (489)
T ss_dssp EETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHH-HHHH-------H--HHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHh-hhhh-------c--cHHHHHHHHHhcccc
Confidence 6554577888888887421 111111 12333 33 4333322111 0010 0 011111111110000
Q ss_pred CcccccccCCCCCcHHHHHHHhCCCcc-------h-hHHHHHHhhcccCccccchhHHHHHHH--HHHHHHHh-hhhCCC
Q psy2620 154 DPKTWKDINPQSATTAQLYDKFGLDPN-------T-KDFTGHALALYRDDEYINDLAIHTIRR--IKLYSDSL-ARYGKS 222 (441)
Q Consensus 154 ~~~~~~~~~~~~~s~~~~l~~~~l~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~s~-~~~G~~ 222 (441)
. ..+.. ....++.+|+++++-... . ..++....................+.. +..++... ......
T Consensus 153 ~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (489)
T 2jae_A 153 D-QVLSR--EDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAM 229 (489)
T ss_dssp T-TTSCH--HHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSS
T ss_pred c-cccch--hhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCc
Confidence 0 00000 012367777776432100 0 000000000000000000000111100 00011000 011224
Q ss_pred CeeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC---eEEEcCEEEECCCC---------Ccc
Q psy2620 223 PYLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT---EIARCKQVYCDPSY---------VQD 289 (441)
Q Consensus 223 ~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g---~~~~a~~vI~~~~~---------~~~ 289 (441)
.+.+++||++.|+++|++.+.. ++|+++++|++|..+++++. |.+ +| ++++||+||++.+. +|+
T Consensus 230 ~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~~ 306 (489)
T 2jae_A 230 MMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQNNLPG 306 (489)
T ss_dssp SEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEECCCH
T ss_pred cEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCccCCCH
Confidence 6889999999999999876532 78999999999998888755 543 55 68999999997653 121
Q ss_pred c----c--ccccceEEEEEEecCC
Q psy2620 290 R----V--KKLNQVIRCICLMDHP 307 (441)
Q Consensus 290 ~----~--~~~~~~~~~~~~~~~~ 307 (441)
. + ...+.+.++++.++++
T Consensus 307 ~~~~~l~~~~~~~~~kv~l~~~~~ 330 (489)
T 2jae_A 307 DVLTALKAAKPSSSGKLGIEYSRR 330 (489)
T ss_dssp HHHHHHHTEECCCEEEEEEEESSC
T ss_pred HHHHHHHhCCCccceEEEEEeCCC
Confidence 1 1 1256788999999875
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.65 E-value=3.3e-16 Score=159.69 Aligned_cols=258 Identities=12% Similarity=0.095 Sum_probs=136.3
Q ss_pred cccEEEECCChhHHHHHhhhccCC-CeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceee
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSG-KKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLM 82 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~ 82 (441)
.+||||||||++||+||++|+++| ++|+|||+++++||++.|.. .. ..+.+|++++++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~-~~-------------------~G~~~D~G~~~~~ 67 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVT-GY-------------------QGRKYDIGASWHH 67 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEE-CG-------------------GGCEEESSCCEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeee-cC-------------------CCcEEecCCeEEe
Confidence 589999999999999999999999 99999999999999998876 21 1246788888876
Q ss_pred cC--chHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChH-HHHHHHHHHHHHHhhcccCccccc
Q psy2620 83 AN--GSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLF-EKRRFRNFLVYIQEFSEADPKTWK 159 (441)
Q Consensus 83 ~~--~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~-~k~~l~~~~~~~~~~~~~~~~~~~ 159 (441)
.. .++.+++.+.++.... ..+.+.+|..+.++.+...........+. -...+.++...... ..
T Consensus 68 ~~~~~~~~~~~~~lg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----- 133 (516)
T 1rsg_A 68 DTLTNPLFLEEAQLSLNDGR------TRFVFDDDNFIYIDEERGRVDHDKELLLEIVDNEMSKFAELEFH---QH----- 133 (516)
T ss_dssp CTTTCHHHHHHHHHHHHHCC------CCEECCCCCCEEEETTTEECTTCTTTCHHHHHHHHHHHHHHHC-----------
T ss_pred cCCCChHHHHHHHhCCCCcc------eeEEECCCCEEEEcCCCccccccHHHHHHHHHHHHHHHHHHHhh---hc-----
Confidence 43 4566655554432100 01112222222111110000000000000 11222333222110 00
Q ss_pred ccCCCCCcHHHHHHHhC------CCcchhHHHHHHhh---cccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeecCC
Q psy2620 160 DINPQSATTAQLYDKFG------LDPNTKDFTGHALA---LYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPMYG 230 (441)
Q Consensus 160 ~~~~~~~s~~~~l~~~~------l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~gG 230 (441)
......++.+++.++. +.+....++...+. .+........+.. +. +.. ......++.|
T Consensus 134 -~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~--------~~--~~~-~~~~~~~~~g- 200 (516)
T 1rsg_A 134 -LGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAK--------DT--YFG-HQGRNAFALN- 200 (516)
T ss_dssp -----CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHH--------HH--CCC-CSSCCEEESC-
T ss_pred -cCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChH--------HH--Hhh-ccCcchhhhC-
Confidence 0113467887765421 11111111111111 0000000000100 00 001 1122346677
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCC----------------------
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYV---------------------- 287 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~---------------------- 287 (441)
++.++++|++.+. +++|+++++|++|..+++..+.|++ +|++++||+||++.+..
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~L 278 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPL 278 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCC
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCC
Confidence 8888888866543 3679999999999886444456776 67789999999865421
Q ss_pred ccc----c--ccccceEEEEEEecCCCCCC
Q psy2620 288 QDR----V--KKLNQVIRCICLMDHPIPNT 311 (441)
Q Consensus 288 ~~~----~--~~~~~~~~~~~~~~~~~~~~ 311 (441)
|.. + ...+.+.|+++.++++ .|.
T Consensus 279 p~~~~~ai~~~~~~~~~Kv~l~f~~~-fW~ 307 (516)
T 1rsg_A 279 KPVIQDAFDKIHFGALGKVIFEFEEC-CWS 307 (516)
T ss_dssp CHHHHHHTTSSCCCCCEEEEEEESSC-CSC
T ss_pred CHHHHHHHHhCCCCcceEEEEEeCCC-CCC
Confidence 111 1 1256788999999876 453
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.64 E-value=9.7e-15 Score=148.18 Aligned_cols=267 Identities=15% Similarity=0.136 Sum_probs=148.1
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceee
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLM 82 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~ 82 (441)
..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .. ...+..+++++++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~-~~------------------~~~~~~~~g~~~~~ 92 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYR-NE------------------EAGWYANLGPMRLP 92 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEE-ET------------------TTTEEEESSCCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeec-cC------------------CCCchhhcCccccc
Confidence 468999999999999999999999999999999999999987754 11 01355677777765
Q ss_pred cCc-hHHHHHHHhCCcceeEEEEec-ceEEEeCCeEEeCCC---ChHHHhhh------ccCChHH--HHHHHHHHHHHHh
Q psy2620 83 ANG-SLVKLLIHTGVTRYLEFKSVE-GSYVFKGGKISKVPV---DQKEALAS------DLMGLFE--KRRFRNFLVYIQE 149 (441)
Q Consensus 83 ~~~-~~~~~l~~~~~~~~l~~~~~~-~~~~~~~g~~~~~p~---~~~~~~~~------~~~~~~~--k~~l~~~~~~~~~ 149 (441)
... .+.+++.+.|+... .+...+ ..+.+.+|.....+. . ...+.. ......+ ...+.++......
T Consensus 93 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (498)
T 2iid_A 93 EKHRIVREYIRKFDLRLN-EFSQENDNAWYFIKNIRKKVGEVKKD-PGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKR 170 (498)
T ss_dssp TTCHHHHHHHHHTTCCEE-EECSCCTTSEEEETTEEEEHHHHHHC-GGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCce-eecccCCccEEEeCCeeecccccccC-ccccccCCCccccCCCHHHHHHHHHHHHHHHHhh
Confidence 543 45667777776421 121111 123334454332110 0 000000 0000000 0111222222111
Q ss_pred hcccCcccccccCCCCCcHHHHHHHhC-CCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCeeeec
Q psy2620 150 FSEADPKTWKDINPQSATTAQLYDKFG-LDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYLYPM 228 (441)
Q Consensus 150 ~~~~~~~~~~~~~~~~~s~~~~l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~~~~ 228 (441)
.... .....+ ...++.+|+.+.+ +++.....+...+.... .+ .......+.... .. .....+.++.
T Consensus 171 ~~~~--~~~~~~--~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~----~~--~~~~~~~~~~ 237 (498)
T 2iid_A 171 TNCS--YILNKY--DTYSTKEYLIKEGDLSPGAVDMIGDLLNEDS--GY-YVSFIESLKHDD----IF--AYEKRFDEIV 237 (498)
T ss_dssp SCHH--HHHHHH--TTSBHHHHHHHTSCCCHHHHHHHHHHTTCGG--GT-TSBHHHHHHHHH----HH--TTCCCEEEET
T ss_pred ccHH--HHHHHh--hhhhHHHHHHHccCCCHHHHHHHHHhcCccc--ch-hHHHHHHHHHHh----cc--ccCcceEEeC
Confidence 1000 000112 3468889998866 44444444322221100 00 011111111110 11 1234678899
Q ss_pred CCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCe----EEEcCEEEECCCC-----------Ccccc-
Q psy2620 229 YGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTE----IARCKQVYCDPSY-----------VQDRV- 291 (441)
Q Consensus 229 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~----~~~a~~vI~~~~~-----------~~~~~- 291 (441)
||++.|+++|++.+.. +|+++++|++|..+++++ .|.+ +|+ +++||+||++.+. +|...
T Consensus 238 gG~~~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~ 313 (498)
T 2iid_A 238 DGMDKLPTAMYRDIQD---KVHFNAQVIKIQQNDQKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKA 313 (498)
T ss_dssp TCTTHHHHHHHHHTGG---GEESSCEEEEEEECSSCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHH
T ss_pred CcHHHHHHHHHHhccc---ccccCCEEEEEEECCCeE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHH
Confidence 9999999999876643 799999999999876664 4543 443 5899999997653 12111
Q ss_pred -----ccccceEEEEEEecCC
Q psy2620 292 -----KKLNQVIRCICLMDHP 307 (441)
Q Consensus 292 -----~~~~~~~~~~~~~~~~ 307 (441)
...+...|+++.++++
T Consensus 314 ~ai~~l~~~~~~kv~l~~~~~ 334 (498)
T 2iid_A 314 HALRSVHYRSGTKIFLTCTTK 334 (498)
T ss_dssp HHHHHCCEECEEEEEEEESSC
T ss_pred HHHHhCCCcceeEEEEEeCCC
Confidence 1246688999999876
No 23
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.61 E-value=9.7e-15 Score=141.40 Aligned_cols=240 Identities=13% Similarity=0.165 Sum_probs=131.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCC-CCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeeccccee
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN-KYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFL 81 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~-~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l 81 (441)
..+||+|||||++||+||+.|+++|++|+|||++ +++||++.+.. .. . +.++. + ....+.++++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~-~~----~---~~~~~--~-~~~~~~~e~G~~~~ 111 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFH-AK----K---GEPSP--F-ADPAQYAEAGAMRL 111 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEEC-CC----T---TSCCS--S-SSTTCCEESSCCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeec-cc----c---ccccc--c-cCCCcEEecCceee
Confidence 4689999999999999999999999999999999 99999998876 21 0 00000 0 01235667777776
Q ss_pred ecCc-hHHHHHHHhCCcceeEEEEe-----------------------------------------cceEEEeCCeEEeC
Q psy2620 82 MANG-SLVKLLIHTGVTRYLEFKSV-----------------------------------------EGSYVFKGGKISKV 119 (441)
Q Consensus 82 ~~~~-~~~~~l~~~~~~~~l~~~~~-----------------------------------------~~~~~~~~g~~~~~ 119 (441)
.... .+.+++.+.++.....+..- ....++.+|.....
T Consensus 112 ~~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~ 191 (376)
T 2e1m_A 112 PSFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRR 191 (376)
T ss_dssp ETTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEH
T ss_pred cchHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecc
Confidence 5443 45677888887654322110 11123334433321
Q ss_pred C---CChHHHhhh--cc------CChH--HHHHHHHHHHHHHhhccc-----C--c---ccccc--cCCCCCcHHHHHH-
Q psy2620 120 P---VDQKEALAS--DL------MGLF--EKRRFRNFLVYIQEFSEA-----D--P---KTWKD--INPQSATTAQLYD- 173 (441)
Q Consensus 120 p---~~~~~~~~~--~~------~~~~--~k~~l~~~~~~~~~~~~~-----~--~---~~~~~--~~~~~~s~~~~l~- 173 (441)
. .. ...+.. .+ .... -.+.+.+|...+...... . + ..|.. ...+..|+.+|+.
T Consensus 192 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~S~~~~L~~ 270 (376)
T 2e1m_A 192 AQYATD-PSSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRDFDGYSMGRFLRE 270 (376)
T ss_dssp HHHHHC-THHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHHHTTCBHHHHHHH
T ss_pred cccccC-HHHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHHHHHhCCCHHHHHhh
Confidence 0 00 000100 00 0110 112333333332210000 0 0 01110 0124689999998
Q ss_pred HhCCCcchhHHHHHHhhcccCccccchhHHHHHHHHHHHHHHhhhh-CCCCeeeecCCcchHHHHHHHHHHHcCcEEEcc
Q psy2620 174 KFGLDPNTKDFTGHALALYRDDEYINDLAIHTIRRIKLYSDSLARY-GKSPYLYPMYGLGELPQSFARLSAIYGGTYMLD 252 (441)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~-G~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~ 252 (441)
+.++++..++.+..... ............+. ....+ +...+..+.||++.|+++|++.+ +..|+++
T Consensus 271 ~~g~s~~~~~~~~~~~~---~~~~~~~s~l~~l~-------~~~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~ 337 (376)
T 2e1m_A 271 YAEFSDEAVEAIGTIEN---MTSRLHLAFFHSFL-------GRSDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMG 337 (376)
T ss_dssp TSCCCHHHHHHHHHHTT---CTTTTTSBHHHHHH-------HCSCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECS
T ss_pred ccCCCHHHHHHHHhhcC---ccccchhhHHHHHH-------HhhhhccCCceEEECCcHHHHHHHHHHhc---CCcEEec
Confidence 78888877766533321 11111112111111 11112 23468899999999999998765 5679999
Q ss_pred cceeEEEEeCCEEEE
Q psy2620 253 KPVDEIVIENGKVVG 267 (441)
Q Consensus 253 ~~V~~i~~~~~~~~~ 267 (441)
++|++|...++.+..
T Consensus 338 ~~V~~I~~~~~gv~v 352 (376)
T 2e1m_A 338 QRMVRLEYYDPGRDG 352 (376)
T ss_dssp EEEEEEEECCCC---
T ss_pred CeEEEEEECCCceEE
Confidence 999999876554433
No 24
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.57 E-value=6.1e-16 Score=152.43 Aligned_cols=297 Identities=11% Similarity=0.095 Sum_probs=154.3
Q ss_pred CCCcccEEEECCChhHHHHHhhhccC-CCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeee-ccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVS-GKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVD-LIP 78 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~id-l~p 78 (441)
|++++||+|||||++||+||++|+++ |++|+|+|+++++||++.|.. .. ...+.++ .++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~-~~------------------~~g~~~~~~G~ 64 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEA-EP------------------QTGIEVHKYGA 64 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEE-CT------------------TTCCEEETTSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeecc-cc------------------CCCEEEEeCCC
Confidence 44579999999999999999999999 999999999999999998876 21 0023343 667
Q ss_pred ceeecC-chHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChH-HHHHHHHHHHHHHhhcccCcc
Q psy2620 79 KFLMAN-GSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLF-EKRRFRNFLVYIQEFSEADPK 156 (441)
Q Consensus 79 ~~l~~~-~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~-~k~~l~~~~~~~~~~~~~~~~ 156 (441)
+++... ..+.+++.+.++... + ....+++.+|+.+.+|.+. ..+.. +.... ....+.+++.......
T Consensus 65 ~~~~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~G~~~~~p~~~-~~~~~-l~~~~~~~~~~~~~l~~~~~~~----- 133 (399)
T 1v0j_A 65 HLFHTSNKRVWDYVRQFTDFTD--Y--RHRVFAMHNGQAYQFPMGL-GLVSQ-FFGKYFTPEQARQLIAEQAAEI----- 133 (399)
T ss_dssp CCEEESCHHHHHHHTTTCCBCC--C--CCCEEEEETTEEEEESSSH-HHHHH-HHTSCCCHHHHHHHHHHHGGGS-----
T ss_pred cEEcCCcHHHHHHHHHhhhhhc--c--ccceEEEECCEEEeCCCCH-HHHHH-HhcccCCHHHHHHHHHHHhhcc-----
Confidence 766543 456677777665321 1 1223455689888888773 22211 11110 1222332322221100
Q ss_pred cccccCCCCCcHHHHHHHhCCCcchh-HHHHHHh-hcccCccccchhHHHHHHHHHHHHHHhhhhCCCCee-eecCCcch
Q psy2620 157 TWKDINPQSATTAQLYDKFGLDPNTK-DFTGHAL-ALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYL-YPMYGLGE 233 (441)
Q Consensus 157 ~~~~~~~~~~s~~~~l~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~-~~~gG~~~ 233 (441)
. .....++.+|+.+. +.+.+. .++.... ..+..+.. .-+... +.++......-..++...|. +|+||+++
T Consensus 134 --~--~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~-~ls~~~-~~~~~~~~~~~~~~~~~~~~~~p~gG~~~ 206 (399)
T 1v0j_A 134 --D--TADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPK-ELPAAN-ITRLPVRYTFDNRYFSDTYEGLPTDGYTA 206 (399)
T ss_dssp --C--TTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGG-GSCGGG-CSCCCCCSSSCCCSCCCSEEECBTTHHHH
T ss_pred --C--CCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChh-hcChHh-hhcceeEeccccchhhhhhcccccccHHH
Confidence 0 01346788888763 223332 2322211 22211100 001000 00000000000011222453 99999999
Q ss_pred HHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEE-EcCEEEECCCCC--cc-ccc--cccceEEEEEEecCC
Q psy2620 234 LPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIA-RCKQVYCDPSYV--QD-RVK--KLNQVIRCICLMDHP 307 (441)
Q Consensus 234 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~-~a~~vI~~~~~~--~~-~~~--~~~~~~~~~~~~~~~ 307 (441)
++++|++ ..|++|++|++|++|..+ | . ++ .||+||++...- .. .+. .+.++..+.+.++.+
T Consensus 207 l~~~l~~---~~g~~I~l~~~V~~I~~~------v--~--~~~~aD~VI~t~p~~~l~~~~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 207 WLQNMAA---DHRIEVRLNTDWFDVRGQ------L--R--PGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp HHHHHTC---STTEEEECSCCHHHHHHH------H--T--TTSTTCCEEECSCHHHHTTTTTCCCCEEEEEEEEEEESSS
T ss_pred HHHHHHh---cCCeEEEECCchhhhhhh------h--h--hcccCCEEEECCcHHHHHhhhhCCCCcceEEEEEEEEccc
Confidence 9999965 568999999999998532 2 1 45 799999876431 11 011 123334455566653
Q ss_pred CCCCCCCCeeEEEecCCCCCCCCcEEEEEe-cCCcccc-CCCeEEEEEE
Q psy2620 308 IPNTKDALSCQIIIPQKQVNRKSDIYVSLV-SYTHQVS-AKGWFIAMVS 354 (441)
Q Consensus 308 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~-~~~~~~~-p~g~~~~~i~ 354 (441)
.+. ...++.+|..+.. ... +... +...... |.+..+++..
T Consensus 274 -~~~---~~~~~~~~~~~~~-~~r--i~~~~~~~~~~~~~~~~~~v~~e 315 (399)
T 1v0j_A 274 -DFQ---GTAVMNYNDLDVP-YTR--IHEFRHFHPERDYPTDKTVIMRE 315 (399)
T ss_dssp -CSS---SSSEEEECCTTSS-CSE--EEEGGGGCTTSCCCSSCEEEEEE
T ss_pred -cCC---CCeEEEeCCCCCC-cce--eEeecCCCCCCcCCCCCeEEEEe
Confidence 221 2346667653221 112 2333 3333444 5666655553
No 25
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.54 E-value=5e-15 Score=145.05 Aligned_cols=228 Identities=12% Similarity=0.157 Sum_probs=131.5
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceee-ecccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNV-DLIPK 79 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~i-dl~p~ 79 (441)
|+ ++||+|||||++||++|+.|+++|++|+|+|+++++||++.+.. .. ...+.+ +.+++
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~------------------~~g~~~~~~G~~ 60 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDAR-DS------------------ETNVMVHVYGPH 60 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEE-CT------------------TTCCEEETTSCC
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccccc-cc------------------CCCceEeeCCce
Confidence 54 58999999999999999999999999999999999999998866 21 002333 56777
Q ss_pred eeecC-chHHHHHHHhCCcceeEEEEe-cceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccc
Q psy2620 80 FLMAN-GSLVKLLIHTGVTRYLEFKSV-EGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKT 157 (441)
Q Consensus 80 ~l~~~-~~~~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~ 157 (441)
++... ..+.+++.+.+. +... ...+.+.+|+.+.+|.+. ..+...+........+.+++..... ..
T Consensus 61 ~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~g~~~~~P~~~-~~~~~l~~~~~~~~~~~~~l~~~~~---~~--- 128 (384)
T 2bi7_A 61 IFHTDNETVWNYVNKHAE-----MMPYVNRVKATVNGQVFSLPINL-HTINQFFSKTCSPDEARALIAEKGD---ST--- 128 (384)
T ss_dssp CEEESCHHHHHHHHTTSC-----EEECCCCEEEEETTEEEEESCCH-HHHHHHTTCCCCHHHHHHHHHHHSC---CS---
T ss_pred EECCCCHHHHHHHHHHhh-----hcccccceEEEECCEEEECCCCh-hHHHHHhcccCCHHHHHHHHHHhhh---cc---
Confidence 76654 356677776654 2222 223455688888888874 3332211111112233334333221 10
Q ss_pred ccccCCCCCcHHHHHHHhCCCcchhH-HHHH-HhhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCee-eecCCcchH
Q psy2620 158 WKDINPQSATTAQLYDKFGLDPNTKD-FTGH-ALALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYL-YPMYGLGEL 234 (441)
Q Consensus 158 ~~~~~~~~~s~~~~l~~~~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~-~~~gG~~~l 234 (441)
.....++.+|+.+. +.+.+.+ ++.. ....+..+.. .-+.. .+.++.........+....|. +|+||++++
T Consensus 129 ----~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~-~ls~~-~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l 201 (384)
T 2bi7_A 129 ----IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPS-ELPAS-ILKRLPVRFNYDDNYFNHKFQGMPKCGYTQM 201 (384)
T ss_dssp ----CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGG-GSBGG-GCCSCCCCSSSCCCSCCCSEEEEETTHHHHH
T ss_pred ----CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHH-HhCHH-HHhccccccccccccccccccEEECcCHHHH
Confidence 11357999998765 3333433 3221 1122221100 00000 000000000000111223564 999999999
Q ss_pred HHHHHHHHHHcCcEEEccccee-EEEEeCCEEEEEEeCCeEEEcCEEEECCC
Q psy2620 235 PQSFARLSAIYGGTYMLDKPVD-EIVIENGKVVGVRSGTEIARCKQVYCDPS 285 (441)
Q Consensus 235 ~~~l~~~~~~~G~~i~~~~~V~-~i~~~~~~~~~v~~~g~~~~a~~vI~~~~ 285 (441)
+++|++ ..|++|+++++|+ +|.. .+|+||++..
T Consensus 202 ~~~l~~---~~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p 235 (384)
T 2bi7_A 202 IKSILN---HENIKVDLQREFIVEERT---------------HYDHVFYSGP 235 (384)
T ss_dssp HHHHHC---STTEEEEESCCCCGGGGG---------------GSSEEEECSC
T ss_pred HHHHHh---cCCCEEEECCeeehhhhc---------------cCCEEEEcCC
Confidence 999975 4689999999999 8742 2899998764
No 26
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.53 E-value=4.4e-14 Score=142.35 Aligned_cols=265 Identities=11% Similarity=0.135 Sum_probs=141.3
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCC-eEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPK 79 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~ 79 (441)
|...+||+|||+|++||++|+.|+++|+ +|+|+|+++++||++.+.. .. .+.+|++++
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~--------------------~~~~d~g~~ 59 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FA--------------------GINVELGAN 59 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ET--------------------TEEEESSCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cC--------------------CcEEeeCCe
Confidence 3567899999999999999999999998 8999999999999998876 32 245677777
Q ss_pred eeec-----CchHHHHHHH-hCCcceeEEEEecc--eEEE-eCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhh
Q psy2620 80 FLMA-----NGSLVKLLIH-TGVTRYLEFKSVEG--SYVF-KGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEF 150 (441)
Q Consensus 80 ~l~~-----~~~~~~~l~~-~~~~~~l~~~~~~~--~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~ 150 (441)
++.. ..++.+++.+ .++.... ...+. .+++ .+|+.+.. +... ..+.. ...+.+|.+.....
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~lgl~~~~--~~~~~~~~~~~~~~g~~~~~-----~~~~-~~~~~--~~~~~~~~~~~~~~ 129 (472)
T 1b37_A 60 WVEGVNGGKMNPIWPIVNSTLKLRNFR--SDFDYLAQNVYKEDGGVYDE-----DYVQ-KRIEL--ADSVEEMGEKLSAT 129 (472)
T ss_dssp EEEEESSSSCCTHHHHHHTTSCCCEEE--CCCTTGGGCEECSSSSBCCH-----HHHH-HHHHH--HHHHHHHHHHHHHT
T ss_pred EEeccCCCCCCHHHHHHHhhcCCceee--ccCccccceeEcCCCCCCCH-----HHHH-HHHHH--HHHHHHHHHHHHHh
Confidence 7752 2456777777 6764321 11111 1222 24443221 1110 00000 01222333222211
Q ss_pred cccCcccccccCCCCCcHHH--HHHHhCC--Ccc-hhHHHHHHh-hc-ccCccccchhHHHHHHHHHHHHHHhhhhCCCC
Q psy2620 151 SEADPKTWKDINPQSATTAQ--LYDKFGL--DPN-TKDFTGHAL-AL-YRDDEYINDLAIHTIRRIKLYSDSLARYGKSP 223 (441)
Q Consensus 151 ~~~~~~~~~~~~~~~~s~~~--~l~~~~l--~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~ 223 (441)
.. + ...+..++.+ ++.+... ... ...++.... .. +...... ......+ ....+ ..++...
T Consensus 130 ~~--~-----~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~-~~~~~----~~~~~~~ 196 (472)
T 1b37_A 130 LH--A-----SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRV-TSLQNTV-PLATF----SDFGDDV 196 (472)
T ss_dssp SC--T-----TCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGG-BBSTTTS-SCHHH----HHHCSEE
T ss_pred hc--c-----ccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccc-cchhhcc-ccccc----cccCCce
Confidence 10 0 0112334432 3333221 111 111221111 00 0000000 0000000 00001 1123222
Q ss_pred -eeeecCCcchHHHHHHHHHHHc--------CcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCC------
Q psy2620 224 -YLYPMYGLGELPQSFARLSAIY--------GGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYV------ 287 (441)
Q Consensus 224 -~~~~~gG~~~l~~~l~~~~~~~--------G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~------ 287 (441)
+..+.||++.++++|++.+... |++|+++++|++|..+++++. |++ +|++++||+||++.+..
T Consensus 197 ~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~ 275 (472)
T 1b37_A 197 YFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTEDNSVYSADYVMVSASLGVLQSDL 275 (472)
T ss_dssp EEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETTSCEEEESEEEECSCHHHHHTTS
T ss_pred eeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECCCCEEEcCEEEEecCHHHhccCC
Confidence 3345799999999998877654 789999999999998777755 665 67789999999976531
Q ss_pred -------ccc----cc--cccceEEEEEEecCCCCCC
Q psy2620 288 -------QDR----VK--KLNQVIRCICLMDHPIPNT 311 (441)
Q Consensus 288 -------~~~----~~--~~~~~~~~~~~~~~~~~~~ 311 (441)
|.. ++ ..+.+.|+++.++++ .|.
T Consensus 276 ~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~-~w~ 311 (472)
T 1b37_A 276 IQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRK-FWP 311 (472)
T ss_dssp SEEESCCCHHHHHHHHHSEEECEEEEEEECSSC-CSC
T ss_pred eeECCCCCHHHHHHHHhcCCcceeEEEEECCCc-CCC
Confidence 111 11 245678999999875 443
No 27
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.51 E-value=1.2e-14 Score=141.83 Aligned_cols=259 Identities=16% Similarity=0.204 Sum_probs=142.3
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceee-eccccee
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNV-DLIPKFL 81 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~i-dl~p~~l 81 (441)
..+||+|||||++||+||+.|+++|++|+|+|+++++||.+.+.. .. .| +.+ +.+|+++
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~---~G----------------~~~~~~G~~~~ 87 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCY-DD---AG----------------VLIHPYGPHIF 87 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEE-CT---TS----------------CEECTTSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceee-cc---CC----------------ceEeecCCccc
Confidence 468999999999999999999999999999999999999998754 11 12 222 6677776
Q ss_pred ecC-chHHHHHHHhCCcceeEEEE-ecceEEEeCCeEEeCCCChHHHhhhccCCh-HHHHHHHHHHHHHHhhcccCcccc
Q psy2620 82 MAN-GSLVKLLIHTGVTRYLEFKS-VEGSYVFKGGKISKVPVDQKEALASDLMGL-FEKRRFRNFLVYIQEFSEADPKTW 158 (441)
Q Consensus 82 ~~~-~~~~~~l~~~~~~~~l~~~~-~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~-~~k~~l~~~~~~~~~~~~~~~~~~ 158 (441)
... ..+.+++.+.+. +.. ....+.+.+|+++.+|.+. ..+.. +..+ ...+....++.. ...
T Consensus 88 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~lP~~~-~~~~~-l~~~~~~~~~~~~~l~~-~~~-------- 151 (397)
T 3hdq_A 88 HTNSKDVFEYLSRFTE-----WRPYQHRVLASVDGQLLPIPINL-DTVNR-LYGLNLTSFQVEEFFAS-VAE-------- 151 (397)
T ss_dssp EESCHHHHHHHHTSCC-----EEECCCBEEEEETTEEEEESCCH-HHHHH-HHTCCCCHHHHHHHHHH-HCC--------
T ss_pred CCChHHHHHHHHHhhh-----cccccccceEEECCEEEEcCCCh-HHHHH-hhccCCCHHHHHHHHhh-ccc--------
Confidence 644 456677766553 222 2233556789999999884 22211 1110 112233333331 110
Q ss_pred cccCCCCCcHHHHHHHhCCCcchhH-HHHHHh-hcccCc-cccchhHHHHHHHHHHHHHHhhhhCCCCe-eeecCCcchH
Q psy2620 159 KDINPQSATTAQLYDKFGLDPNTKD-FTGHAL-ALYRDD-EYINDLAIHTIRRIKLYSDSLARYGKSPY-LYPMYGLGEL 234 (441)
Q Consensus 159 ~~~~~~~~s~~~~l~~~~l~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~l~~~~~~~~s~~~~G~~~~-~~~~gG~~~l 234 (441)
. .....++.+|+.+..- +.+.+ ++.... ..+..+ ..++.. -+.++......-..+-...| .+|+||.+++
T Consensus 152 ~--~~~~~s~~e~~~~~~G-~~~~e~~~~py~~k~~~~~~~~Lsa~---~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l 225 (397)
T 3hdq_A 152 K--VEQVRTSEDVVVSKVG-RDLYNKFFRGYTRKQWGLDPSELDAS---VTARVPTRTNRDNRYFADTYQAMPLHGYTRM 225 (397)
T ss_dssp C--CSSCCBHHHHHHHHHH-HHHHHHHTHHHHHHHHSSCGGGSBTT---TGGGSCCCSSCCCBSCCCSEEEEETTCHHHH
T ss_pred C--CCCCcCHHHHHHHhcC-HHHHHHHHHHHhCchhCCCHHHHHHH---HHHhcCcccccCccchhhhheeccCCCHHHH
Confidence 1 1135799998865311 23322 222211 122111 001100 00000000000000112345 4799999999
Q ss_pred HHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccccc------cccceEEEEEEecCCC
Q psy2620 235 PQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDRVK------KLNQVIRCICLMDHPI 308 (441)
Q Consensus 235 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 308 (441)
.++|+ +..|++|+++++|+++ +.++.+|+||++.. ++..+. ...++.-+.++++.+.
T Consensus 226 ~e~l~---~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P-~d~~~~~~~g~L~yrsl~~~~~~~~~~~ 288 (397)
T 3hdq_A 226 FQNML---SSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGP-VDAFFDFCYGKLPYRSLEFRHETHDTEQ 288 (397)
T ss_dssp HHHHT---CSTTEEEEESCCGGGT-------------TTTSCEEEEEECSC-HHHHTTTTTCCCCEEEEEEEEEEESSSC
T ss_pred HHHHH---hccCCEEEECCeEEec-------------cccccCCEEEEcCC-HHHHHHHhcCCCCCceEEEEEEEecccc
Confidence 99984 4569999999999843 33567889988653 221111 1122333334565431
Q ss_pred CCCCCCCeeEEEecCC
Q psy2620 309 PNTKDALSCQIIIPQK 324 (441)
Q Consensus 309 ~~~~~~~~~~~~~p~~ 324 (441)
+ ....++.+|+.
T Consensus 289 -~---~~~~~vn~~d~ 300 (397)
T 3hdq_A 289 -L---LPTGTVNYPND 300 (397)
T ss_dssp -S---CSSSEEECSSS
T ss_pred -C---CCCeEEEeCCC
Confidence 1 23567888854
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.48 E-value=2.2e-14 Score=139.71 Aligned_cols=227 Identities=14% Similarity=0.153 Sum_probs=130.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeee-cccceee
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVD-LIPKFLM 82 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~id-l~p~~l~ 82 (441)
++||+|||||++||+||++|+++|++|+|+|+++++||.+.+.. .. | +.++ .+|+++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~----g----------------~~~~~~G~~~~~ 59 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CE----G----------------IQIHKYGAHIFH 59 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ET----T----------------EEEETTSCCCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cC----C----------------ceeeccCCceec
Confidence 37999999999999999999999999999999999999998866 22 2 3453 6677666
Q ss_pred cCc-hHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccccccc
Q psy2620 83 ANG-SLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWKDI 161 (441)
Q Consensus 83 ~~~-~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~~~ 161 (441)
... .+.+++.+.+... .+ ......+.+|+.+.+|.+. ..+..- ........+.+++....... .
T Consensus 60 ~~~~~~~~~~~~l~~~~--~~--~~~~~~~~~g~~~~~p~~~-~~~~~l-~~~~~~~~~~~~l~~~~~~~-------~-- 124 (367)
T 1i8t_A 60 TNDKYIWDYVNDLVEFN--RF--TNSPLAIYKDKLFNLPFNM-NTFHQM-WGVKDPQEAQNIINAQKKKY-------G-- 124 (367)
T ss_dssp ESCHHHHHHHHTTSCBC--CC--CCCCEEEETTEEEESSBSH-HHHHHH-HCCCCHHHHHHHHHHHTTTT-------C--
T ss_pred CCCHHHHHHHHHhhhhh--hc--cccceEEECCeEEEcCCCH-HHHHHH-hccCCHHHHHHHHHHHhhcc-------C--
Confidence 543 4556665554321 11 1122345578888888874 333221 11112333445554433211 1
Q ss_pred CCCCCcHHHHHHHhCCCcchhH-HHHHH-hhcccCccccchhHHHHHHHHHHHHHHhhhhCCCCee-eecCCcchHHHHH
Q psy2620 162 NPQSATTAQLYDKFGLDPNTKD-FTGHA-LALYRDDEYINDLAIHTIRRIKLYSDSLARYGKSPYL-YPMYGLGELPQSF 238 (441)
Q Consensus 162 ~~~~~s~~~~l~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~G~~~~~-~~~gG~~~l~~~l 238 (441)
.....++.+|+.+. +.+.+.+ ++... ...+..+.. .-+.. .+.++......-..+....|. +|+||+++++++|
T Consensus 125 ~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~-~lsa~-~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l 201 (367)
T 1i8t_A 125 DKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAK-ELPAF-IIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKM 201 (367)
T ss_dssp CCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGG-GSCTT-SSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHH
T ss_pred CCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChH-HcCHH-HHhhceeeeccccccccchhhcccCCCHHHHHHHH
Confidence 11347899998765 3233332 32221 122221110 00100 000000000000011233464 9999999999999
Q ss_pred HHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCC
Q psy2620 239 ARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPS 285 (441)
Q Consensus 239 ~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~ 285 (441)
++ |++|++|++|++|.. + | ++.+|+||++..
T Consensus 202 ~~-----g~~i~l~~~V~~i~~---~---v-----~~~~D~VV~a~p 232 (367)
T 1i8t_A 202 LE-----GVDVKLGIDFLKDKD---S---L-----ASKAHRIIYTGP 232 (367)
T ss_dssp HT-----TSEEECSCCGGGSHH---H---H-----HTTEEEEEECSC
T ss_pred hc-----CCEEEeCCceeeech---h---h-----hccCCEEEEecc
Confidence 76 689999999998851 1 1 246899998754
No 29
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.47 E-value=8.6e-14 Score=135.09 Aligned_cols=60 Identities=8% Similarity=0.066 Sum_probs=50.3
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC--eEEEcCEEEECCCCCccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT--EIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g--~~~~a~~vI~~~~~~~~~ 290 (441)
...+.++|.+.+++.|++++++++|++|..+++.++.|.+ +| .+++||.||.+++.|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~ 211 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPG 211 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHH
Confidence 4689999999999999999999999999987655455666 45 589999999999988644
No 30
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.45 E-value=4.9e-13 Score=133.35 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=57.6
Q ss_pred eeeecC-C---cchHHHHHHHHHHHcCcEEEccc---ceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcccc
Q psy2620 224 YLYPMY-G---LGELPQSFARLSAIYGGTYMLDK---PVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 224 ~~~~~g-G---~~~l~~~l~~~~~~~G~~i~~~~---~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~~~ 291 (441)
+..+.+ | ...++++|.+.+++.|++|++++ +|++|..+++++++|++ +|++++||.||++++.|...+
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGT
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhh
Confidence 344445 4 56899999999999999999999 99999999999998987 567999999999999886544
No 31
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.40 E-value=2.2e-12 Score=125.83 Aligned_cols=66 Identities=18% Similarity=0.082 Sum_probs=55.1
Q ss_pred eeeecCC---cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 224 YLYPMYG---LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 224 ~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
+.++.+| ...++++|.+.+++.|++|+++++|++|..++++ ++|++++.+++||+||.+++.|...
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g~i~a~~VV~A~G~~s~~ 211 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAGSYRAAVLVNAAGAWCDA 211 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSEEEEESEEEECCGGGHHH
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCCEEEcCEEEECCChhHHH
Confidence 3444444 4689999999999999999999999999988877 6788766689999999999998644
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.35 E-value=1.2e-11 Score=120.85 Aligned_cols=60 Identities=22% Similarity=0.246 Sum_probs=52.6
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
...+.++|.+.+++.|++++++++|++|..+++++.+|++++.+++||.||.+++.|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~s~~ 207 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWANL 207 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchhHHH
Confidence 468889999999999999999999999998888888888865589999999999988643
No 33
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.34 E-value=3e-11 Score=127.73 Aligned_cols=253 Identities=13% Similarity=0.125 Sum_probs=131.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeec
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMA 83 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~ 83 (441)
.+||+|||||++||+||..|+++|++|+|+|+++.+||++.|.. .. . .+.+++++.++..
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~-~~---~----------------G~~vd~Ga~~i~G 395 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDK-SF---K----------------GVTVGRGAQIVNG 395 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEEC-CS---T----------------TCCEESSCCEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeecc-cc---C----------------CeEeccCCeEEeC
Confidence 47999999999999999999999999999999999999998866 11 1 2345566665532
Q ss_pred --CchHHHHHHHhCCcceeEEEEecceEEEeCCeEEeCCCChHHHhhhccCChHHHHHHHHHHHHHHhhcccCccccccc
Q psy2620 84 --NGSLVKLLIHTGVTRYLEFKSVEGSYVFKGGKISKVPVDQKEALASDLMGLFEKRRFRNFLVYIQEFSEADPKTWKDI 161 (441)
Q Consensus 84 --~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~~~ 161 (441)
..++..++.+.++.... ......+...+|... . .. +.. .....+.+++..+..+...... .
T Consensus 396 ~~~np~~~l~~~lGl~~~~--~~~~~~l~~~~g~~~----~-~~-~~~-----~~~~~~~~ll~~~~~~~~~~~~---~- 458 (776)
T 4gut_A 396 CINNPVALMCEQLGISMHK--FGERCDLIQEGGRIT----D-PT-IDK-----RMDFHFNALLDVVSEWRKDKTQ---L- 458 (776)
T ss_dssp CTTCHHHHHHHHHTCCCEE--CCSCCCEECTTSCBC----C-HH-HHH-----HHHHHHHHHHHHHHHHGGGCCG---G-
T ss_pred CccChHHHHHHHhCCcccc--cccccceEccCCccc----c-hh-HHH-----HHHHHHHHHHHHHHHHhhcccc---c-
Confidence 24566667777764211 000111111222211 1 01 100 0111223333333333221100 0
Q ss_pred CCCCCcHHH--------HHHHhCCCcchhH--HHHH---HhhcccCccccchhHHHHHHHHHHHHHHhhhh--CCCCeee
Q psy2620 162 NPQSATTAQ--------LYDKFGLDPNTKD--FTGH---ALALYRDDEYINDLAIHTIRRIKLYSDSLARY--GKSPYLY 226 (441)
Q Consensus 162 ~~~~~s~~~--------~l~~~~l~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~--G~~~~~~ 226 (441)
...++.+ +++..++.-...+ .+.. .+..... ..+....... ......| ..+....
T Consensus 459 --~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G-~~l~~ls~~~-------~~~~~~~~~~~G~~~~ 528 (776)
T 4gut_A 459 --QDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACG-SNLHQVSARS-------WDHNEFFAQFAGDHTL 528 (776)
T ss_dssp --GCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHT-SCTTSBBTTT-------TTGGGGSCCCCSCEEE
T ss_pred --ccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcC-CChHHcChhh-------hhhhhhHHhcCCCeEE
Confidence 1233333 3333333211110 0000 0000000 0000000000 0000001 1123456
Q ss_pred ecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCC-------------Cccc--
Q psy2620 227 PMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSY-------------VQDR-- 290 (441)
Q Consensus 227 ~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~-------------~~~~-- 290 (441)
..+|++.+.++|++ |.+|+++++|++|..+++++. |.+ +|+++.||+||++... +|..
T Consensus 529 ~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~~~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~ 602 (776)
T 4gut_A 529 LTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYSGDEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKM 602 (776)
T ss_dssp CTTCTHHHHHHHHT-----TSCEESSCCEEEEECSSSSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHH
T ss_pred ECChHHHHHHHHHh-----CCcEEcCCeeEEEEEcCCEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHH
Confidence 78899999998864 678999999999988766654 554 6788999999986542 1111
Q ss_pred --c--ccccceEEEEEEecCCCCC
Q psy2620 291 --V--KKLNQVIRCICLMDHPIPN 310 (441)
Q Consensus 291 --~--~~~~~~~~~~~~~~~~~~~ 310 (441)
+ ...+.+.|+++.++++ .|
T Consensus 603 ~ai~~l~~g~~~KV~l~f~~~-FW 625 (776)
T 4gut_A 603 KAINSLGAGIIEKIALQFPYR-FW 625 (776)
T ss_dssp HHHHHEEEECCEEEEEECSSC-TT
T ss_pred HHHHhCCCeeEEEEEEecCcc-cc
Confidence 1 1246678999888875 44
No 34
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.31 E-value=1.2e-11 Score=122.04 Aligned_cols=64 Identities=8% Similarity=0.023 Sum_probs=52.9
Q ss_pred eeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCc
Q psy2620 224 YLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 224 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~ 288 (441)
..++......+.++|.+.+++.|++|+++++|++|..+++. +.|.+++.+++||.||.+++.++
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTEEEEESEEEECCCCSS
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCcEEEeeEEEECCCCcc
Confidence 34555556789999999999999999999999999887775 56777555999999999888764
No 35
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.30 E-value=4.2e-11 Score=128.77 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=53.4
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
...++++|.+.+++.|++|+++++|++|..+++++++|.+++.+++||.||.+++.|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAK 209 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCcEEECCEEEECCccchHH
Confidence 358999999999999999999999999998888888888866689999999999988644
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.28 E-value=7.7e-11 Score=123.87 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=55.6
Q ss_pred eeeecCC---cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcccc
Q psy2620 224 YLYPMYG---LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 224 ~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~~~ 291 (441)
..++.+| ...++++|.+.+++.|++|+++++|++|..++++ +.|++ +|+++.||.||.+++.+...+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l 476 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLNFAGDQQATHSVVVLANGHQISRF 476 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCGGGGGCS
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEEECCCCEEECCEEEECCCcchhcc
Confidence 4555555 4789999999999999999999999999998887 46776 667899999999999886543
No 37
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.28 E-value=9.7e-11 Score=115.03 Aligned_cols=58 Identities=17% Similarity=0.134 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
..+.++|.+.+++.|++|+++++|++|..+++.+ .|++++.+++|+.||.+++.|...
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v-~v~t~~g~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGV-SVTTDRGTYRAGKVVLACGPYTND 210 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEE-EEEESSCEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeE-EEEECCCEEEcCEEEEcCCcChHH
Confidence 5788999999999999999999999999877764 466665689999999999988543
No 38
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.27 E-value=3.2e-11 Score=123.72 Aligned_cols=61 Identities=20% Similarity=0.212 Sum_probs=53.1
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CC--eEEEcCEEEECCCCCcccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GT--EIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g--~~~~a~~vI~~~~~~~~~~ 291 (441)
...++.+|.+.++++|++|+++++|++|..+++++++|++ +| .+++|+.||.+++.|...+
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l 235 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTL 235 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHH
Confidence 4679999999999999999999999999999999888875 23 5799999999999987543
No 39
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.25 E-value=3.9e-10 Score=118.00 Aligned_cols=72 Identities=15% Similarity=0.234 Sum_probs=56.8
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeec
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMA 83 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~ 83 (441)
.+||+|||+|++||+||.+|+++|++|+|+|+++++||++.++. .. .+..+++++++..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~-~~--------------------~~~~~~G~~~~~~ 165 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KG--------------------NYVADLGAMVVTG 165 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEE-ET--------------------TEEEESSCCEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc-cc--------------------CchhhcCcEEEeC
Confidence 57999999999999999999999999999999999999998776 22 3456777776643
Q ss_pred C--chHHHHHHHhCC
Q psy2620 84 N--GSLVKLLIHTGV 96 (441)
Q Consensus 84 ~--~~~~~~l~~~~~ 96 (441)
. .++..+..+.++
T Consensus 166 ~~~~~~~~l~~~l~~ 180 (662)
T 2z3y_A 166 LGGNPMAVVSKQVNM 180 (662)
T ss_dssp SBTCHHHHHHHHHTC
T ss_pred CCCchHHHHHHHhCc
Confidence 2 344455556664
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.24 E-value=1.6e-10 Score=121.55 Aligned_cols=67 Identities=12% Similarity=0.096 Sum_probs=53.6
Q ss_pred eeeecCC---cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCe-EEEcCEEEECCCCCcccc
Q psy2620 224 YLYPMYG---LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTE-IARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 224 ~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~-~~~a~~vI~~~~~~~~~~ 291 (441)
..++.+| ...++++|.+.+++.|++|+++++|++|..++++ +.|++ +|+ +++||.||.+++.|...+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l 472 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHRLPEW 472 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGGTTCS
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcchhcc
Confidence 4445555 4789999999999999999999999999987776 46776 456 899999999999886443
No 41
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.24 E-value=6.1e-11 Score=116.64 Aligned_cols=66 Identities=18% Similarity=0.187 Sum_probs=54.5
Q ss_pred eeecCC---cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 225 LYPMYG---LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 225 ~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
..+.+| ...+.++|.+.+++.|++++++++|++|..+++++++|++++.+++||.||.+++.+...
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~a~~vV~a~G~~s~~ 232 (405)
T 2gag_B 164 WQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIHAGKVALAGAGHSSV 232 (405)
T ss_dssp EETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCCEEEEEEEECCGGGHHH
T ss_pred EeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCceEECCEEEECCchhHHH
Confidence 444444 348899999999999999999999999998888888888754489999999999988643
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.22 E-value=5e-11 Score=115.92 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=49.4
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~~ 291 (441)
...++++|.+.++..|++++.+++|++|..++++ +.|++++.+++||.||.+++.|...+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~a~~vV~a~G~~s~~l 207 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIETADGEYQAKKAIVCAGTWVKDL 207 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSCEEEEEEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEECCCeEEcCEEEEcCCccHHhh
Confidence 3578999999999999999999999999887665 45666544699999999999886543
No 43
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.22 E-value=4.4e-10 Score=119.66 Aligned_cols=72 Identities=15% Similarity=0.234 Sum_probs=56.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCCccccCCCCceeeecccceeec
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPDEVTFGRGRDWNVDLIPKFLMA 83 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~~~~~g~~~~~~idl~p~~l~~ 83 (441)
.+||+|||+|++||+||++|+++|++|+|||+++++||++.++. .. .+..+++++++..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~--------------------~~~~~~G~~~~~~ 336 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KG--------------------NYVADLGAMVVTG 336 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEE-ET--------------------TEEEESSCCEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeec-cc--------------------ccchhcCceEecC
Confidence 57999999999999999999999999999999999999998776 22 3566777777653
Q ss_pred C--chHHHHHHHhCC
Q psy2620 84 N--GSLVKLLIHTGV 96 (441)
Q Consensus 84 ~--~~~~~~l~~~~~ 96 (441)
. ..+..+..+.++
T Consensus 337 ~~~~~~~~l~~~lg~ 351 (852)
T 2xag_A 337 LGGNPMAVVSKQVNM 351 (852)
T ss_dssp SBTCHHHHHHHHTTC
T ss_pred CCCchHHHHHHHhCC
Confidence 2 344455555554
No 44
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.21 E-value=1.3e-10 Score=111.84 Aligned_cols=191 Identities=9% Similarity=0.019 Sum_probs=103.0
Q ss_pred eeeecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCC------Cc---c----
Q psy2620 224 YLYPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSY------VQ---D---- 289 (441)
Q Consensus 224 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~------~~---~---- 289 (441)
.....+|+..+.++|++.. |++|+++++|++|..+++++. |.+ +|+++.||.||++... ++ +
T Consensus 104 ~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISE 179 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCH
T ss_pred ceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEE-EEECCCCEEEcCEEEECCCHHHHHHHhcccccccCH
Confidence 4566789999999997654 899999999999998766643 665 5777899999986542 11 1
Q ss_pred c----c--ccccceEEEEEEecCCCCCCCCCCeeEEEecCCCCCCCCcEEEE-EecCCcccc--CCCeEEEEEEeec---
Q psy2620 290 R----V--KKLNQVIRCICLMDHPIPNTKDALSCQIIIPQKQVNRKSDIYVS-LVSYTHQVS--AKGWFIAMVSTTV--- 357 (441)
Q Consensus 290 ~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~-~~~~~~~~~--p~g~~~~~i~t~~--- 357 (441)
. + ..+.++.++.+.++++. +...+.. .+++++.. .+... ..+.-.++. |.+..++...+..
T Consensus 180 ~~~~~l~~~~~~~~~~v~l~~~~~~-~~~~~~~-g~~~~~~~-----~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~ 252 (342)
T 3qj4_A 180 CQRQQLEAVSYSSRYALGLFYEAGT-KIDVPWA-GQYITSNP-----CIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGV 252 (342)
T ss_dssp HHHHHHHTCCBCCEEEEEEECSSCC---CCSCS-EEECSSCS-----SEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHH
T ss_pred HHHHHHhcCCccccEEEEEEECCCC-ccCCcee-eEEccCCc-----ceEEEEccccCCCCCCCCCCceEEEECCHHHHH
Confidence 1 1 12567888888888652 2212222 33445321 12222 222212222 2333322222211
Q ss_pred --cCCChhhchHHHHhhcc--------cccceeeee-e--eccc----cCC-C-CCCCceeeccCCCCCCChHhHHHHHH
Q psy2620 358 --ETDNPELEIKPGLDLLG--------SYKKKFVTV-S--DYYE----PTD-L-GTESQIFISTSYDATTHFETVCTDVV 418 (441)
Q Consensus 358 --~~~d~~~~l~~~l~~l~--------p~~~~~~~~-~--~~~~----p~~-~-g~~~~~~~~~~~~~~~~~~~~~~~v~ 418 (441)
...++++.++.+++.|. |...++-.+ + .+|. |.. . ...++++++.+|-.....+..+....
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~~~~~~~~~~~~l~laGd~~~g~~v~~ai~sg~ 332 (342)
T 3qj4_A 253 TYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCPGQMTLHHKPFLACGGDGFTQSNFDGCITSAL 332 (342)
T ss_dssp HTTTSCHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSSCSCEEEETTTEEEECSGGGSCSSHHHHHHHHH
T ss_pred HhhcCCHHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccCCCcceeEecCCccEEEEccccCCCCccHHHHHHH
Confidence 12355555555555552 221111111 1 2331 111 1 12357889999965546677777766
Q ss_pred HHHhhcc
Q psy2620 419 NLFKRGT 425 (441)
Q Consensus 419 ~~~~~~~ 425 (441)
..-+++.
T Consensus 333 ~aa~~i~ 339 (342)
T 3qj4_A 333 CVLEALK 339 (342)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6655553
No 45
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.20 E-value=5.9e-10 Score=113.16 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-CCEEEEEEe--CC--eEEEcC-EEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-NGKVVGVRS--GT--EIARCK-QVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~~v~~--~g--~~~~a~-~vI~~~~~~~ 288 (441)
..+.++|.+.+++.|++|+++++|++|..+ +++++||.. ++ .+++|+ .||++++-+.
T Consensus 202 ~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 202 YMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 389999999999999999999999999987 789999875 44 369995 8999888765
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.20 E-value=1.1e-10 Score=116.68 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=51.0
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
...+.++|.+.+++.|++|+++++|++|..+++++++|.+ +|++++||.||.+++.++
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 4678899999999999999999999999988888888887 566799999999888765
No 47
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.19 E-value=2.3e-10 Score=117.66 Aligned_cols=61 Identities=18% Similarity=0.127 Sum_probs=52.0
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CC--eEEEcCEEEECCCCCcccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GT--EIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g--~~~~a~~vI~~~~~~~~~~ 291 (441)
...++.++.+.++..|++|+++++|++|..+++++++|++ +| .+++|+.||.+++.|...+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l 253 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKV 253 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHH
Confidence 3578889999999999999999999999998888888874 34 3799999999999986543
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.17 E-value=1.4e-10 Score=113.65 Aligned_cols=56 Identities=25% Similarity=0.358 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCeEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~~~~a~~vI~~~~~~~ 288 (441)
.+.+.|.+.++..|++++.+++|+++..+++++.+|.+ ++.+++||.||.+.+.+.
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 56677778788889999999999999999998887875 346899999999988775
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.17 E-value=1.1e-10 Score=114.75 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=49.7
Q ss_pred eecCCcchHHHHHHHHHHHcCcEEEcccceeEEEEe----CCEEEEEEeCCeEEEcCEEEECCCCCc
Q psy2620 226 YPMYGLGELPQSFARLSAIYGGTYMLDKPVDEIVIE----NGKVVGVRSGTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 226 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~----~~~~~~v~~~g~~~~a~~vI~~~~~~~ 288 (441)
+|......+.+.|.+.++..|++++++++|++|..+ +++ +.|++++.+++||.||.+++.++
T Consensus 103 ~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTEEEEESEEEECCCCSS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCCEEECCEEEECCCCcc
Confidence 343345678889999999999999999999999876 454 46777666899999999888765
No 50
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.17 E-value=2e-11 Score=126.67 Aligned_cols=80 Identities=11% Similarity=0.035 Sum_probs=60.2
Q ss_pred cccEEEECCChhHHHHHhhhccCC--------CeEEEEcCCC-CC----------------CCcccccCchHHHhhhhCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSG--------KKVLHIDRNK-YY----------------GGESASITPLEELFSKFGS 58 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G--------~~V~vlE~~~-~~----------------GG~~~t~~~~~~~~~g~~~ 58 (441)
..+|+|||||++||+||+.|+++| ++|+|+|+++ ++ ||++.+.. ... +..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~-~~~---~~~- 130 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAAL-VHN---GDP- 130 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEE-ECS---SCG-
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEE-ccC---Ccc-
Confidence 468999999999999999999999 9999999999 99 99988765 210 000
Q ss_pred CCCCccccCCCCceeeecccceeecC-chHHHHHHHh-CCc
Q psy2620 59 TLPDEVTFGRGRDWNVDLIPKFLMAN-GSLVKLLIHT-GVT 97 (441)
Q Consensus 59 d~p~~~~~g~~~~~~idl~p~~l~~~-~~~~~~l~~~-~~~ 97 (441)
....+.+++++.++... ..+.+++.+. |+.
T Consensus 131 ---------~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 131 ---------ASGDTIYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp ---------GGCSEEEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred ---------cCCCcEEecCCEEecCccHHHHHHHHHhcCCc
Confidence 00245678888777654 3556777777 774
No 51
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.16 E-value=2.4e-10 Score=109.38 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=41.0
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 47 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~ 47 (441)
++||+|||||++||++|+.|+++|.+|+|||+++.+||++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 47999999999999999999999999999999999999987654
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.14 E-value=5.3e-10 Score=111.64 Aligned_cols=60 Identities=7% Similarity=0.116 Sum_probs=51.2
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEE---------------eCCEEEEEEeCCeEE--EcCEEEECCCCCccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVI---------------ENGKVVGVRSGTEIA--RCKQVYCDPSYVQDR 290 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---------------~~~~~~~v~~~g~~~--~a~~vI~~~~~~~~~ 290 (441)
...+.++|.+.+++.|++++++++|++|.. +++++++|.+++.++ +||.||.+++.|...
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~~ 256 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWSNR 256 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECCCcCHHH
Confidence 458999999999999999999999999987 566777888754478 999999999988653
No 53
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.13 E-value=4.4e-11 Score=110.28 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=41.8
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 47 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~ 47 (441)
++||+|||||++||+||+.|+++|++|+||||++.+||++++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~ 45 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc
Confidence 48999999999999999999999999999999999999998765
No 54
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.13 E-value=2.5e-10 Score=111.49 Aligned_cols=56 Identities=25% Similarity=0.372 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe--CC--eEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS--GT--EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~--~g--~~~~a~~vI~~~~~~~ 288 (441)
.+-+.|.+.++..|++++++++|+.+..++++++++.. ++ .+++||.||.+.+...
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 44556677788899999999999999999999888764 44 5689999999887653
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.12 E-value=2.6e-09 Score=109.92 Aligned_cols=57 Identities=11% Similarity=0.051 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeC-CEEEEEEe---CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIEN-GKVVGVRS---GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~~v~~---~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++|+++++|++|..++ ++++||.. +|+ +++|+.||.+++.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 5788999999999999999999999999876 88888864 564 799999999888764
No 56
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.11 E-value=6.5e-10 Score=108.61 Aligned_cols=58 Identities=9% Similarity=0.163 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
..+.++|.+.+++.|++++++++|++|..+++. +.|++++.+++||.||.+++.|...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~a~~vV~A~G~~~~~ 207 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIETANGSYTADKLIVSMGAWNSK 207 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEEETTEEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEEeCCCEEEeCEEEEecCccHHH
Confidence 688999999999999999999999999886665 4566766689999999999988654
No 57
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.10 E-value=2e-09 Score=110.65 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=49.8
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeC-CEEEEEEe---CCe--EEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIEN-GKVVGVRS---GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~~v~~---~g~--~~~a~~vI~~~~~~~ 288 (441)
...+.+.|.+.+++.|++|+++++|++|..++ +++++|.. +|+ +++|+.||.+++.+.
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 45788999999999999999999999999887 88888874 564 799999999888765
No 58
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.09 E-value=5.9e-11 Score=115.82 Aligned_cols=66 Identities=6% Similarity=0.016 Sum_probs=53.5
Q ss_pred eeeecCC---cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCccc
Q psy2620 224 YLYPMYG---LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDR 290 (441)
Q Consensus 224 ~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~ 290 (441)
+.++.+| ...+.++|.+.+++.|++++++++|++|..+++++ +|.+++.+++||.||.+++.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~a~~vV~A~G~~s~~ 221 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSGDVWANHVVVASGVWSGM 221 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTEEEEEEEEEECCGGGTHH
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCceEEcCEEEECCChhHHH
Confidence 3444555 36789999999999999999999999998777765 777765589999999999987643
No 59
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.08 E-value=5.5e-10 Score=113.17 Aligned_cols=60 Identities=12% Similarity=0.011 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCe--EEEcCEEEECCCCCcccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTE--IARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~--~~~a~~vI~~~~~~~~~~ 291 (441)
...+..+|.+.+++.|++++++++|++|..++ ++++|.+ +|+ +++|+.||.+++.|...+
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l 213 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQF 213 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHH
Confidence 46789999999999999999999999998876 5677775 464 799999999999987543
No 60
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.05 E-value=1e-09 Score=111.50 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.|.+.+++.|++|+++++|++|..+++++++|.+ +|+++.||.||.+++.++.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 467788888888899999999999999988888888887 5688999999999998873
No 61
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.02 E-value=4.5e-09 Score=108.28 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=47.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-CCEEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-NGKVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.++|.+.+...|++|+++++|++|..+ +++++||.. +|+ ++.|+.||.+++.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 578899999999999999999999999986 788888873 353 699999999887653
No 62
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.00 E-value=4.9e-09 Score=108.29 Aligned_cols=57 Identities=19% Similarity=0.222 Sum_probs=48.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.++|.+.+...|++|+.++.|++|..+++++.||.. +|+ .+.|+.||.+++.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 478899999998899999999999999988899988874 453 799999999877653
No 63
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.98 E-value=8.5e-09 Score=107.26 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=48.3
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
..+..+|.+.+...|++|+.++.|++|..+++++.||.. +|+ .+.|+.||.+++.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 478899999999999999999999999988899888864 353 599999998877654
No 64
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.97 E-value=2.1e-09 Score=110.68 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=47.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe--CC--eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS--GT--EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~--~g--~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++..|++++.+++|++|..+++.+++|.+ +| .+++||.||.+.|...
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 466777888888899999999999999876666677765 56 6899999999988764
No 65
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.97 E-value=7.3e-09 Score=103.52 Aligned_cols=56 Identities=18% Similarity=0.070 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
.+.+.|.+.+...|++++++++|+++..+++++++|.+ +|+ +++||.||.+.|...
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 45667777788899999999999999988888877764 565 899999999887653
No 66
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.97 E-value=5.9e-09 Score=102.97 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEE-EEEEe-CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKV-VGVRS-GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~-~~v~~-~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++++.+++|++|..+++.+ +.|.+ +|+ +++||.||.+.+.+.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 4566777777888899999999999999876543 44554 565 799999999988764
No 67
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.94 E-value=4.4e-08 Score=100.69 Aligned_cols=58 Identities=21% Similarity=0.166 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeC-CEEEEEEe---CCe--EEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIEN-GKVVGVRS---GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~~v~~---~g~--~~~a~~vI~~~~~~~ 288 (441)
...+.+.|.+.+++.|++|+++++|++|..++ ++++||.. +|+ ++.|+.||.+++.++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 34788999999999999999999999998877 88888874 464 699999999888765
No 68
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.89 E-value=1.1e-08 Score=95.61 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=37.5
Q ss_pred CcccEEEECCChhHHHHHhhhccC-CCeEEEEcCCCCCCCcc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVS-GKKVLHIDRNKYYGGES 43 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~-G~~V~vlE~~~~~GG~~ 43 (441)
.++||+|||||++|++||..|+++ |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 358999999999999999999997 99999999999988754
No 69
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.88 E-value=1.3e-08 Score=99.73 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=46.0
Q ss_pred chHHHHHHHHHHHc-CcEEEcccceeEEEEeCCEEE-EEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIY-GGTYMLDKPVDEIVIENGKVV-GVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~-~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++. |++|+++++|++|..++++++ .|++ +|++++||.||.+.+.+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 35667777778887 899999999999988776653 5665 677899999999988765
No 70
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.88 E-value=7.3e-09 Score=102.30 Aligned_cols=59 Identities=19% Similarity=0.107 Sum_probs=51.9
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++++.+|++ +|+++.||.||.+++..|+
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 4677888888899999999999999999887788888887 6789999999999998774
No 71
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.86 E-value=7.4e-09 Score=101.91 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=41.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+.. ++|+++++|++|..+++.+. |++ +|++++||.||.+.+.+.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADGVT-VWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEE-EEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEE-EEEcCCCEEeeCEEEECCCcCh
Confidence 3555666666655 78999999999998887754 444 778999999999888764
No 72
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.86 E-value=1.7e-08 Score=101.95 Aligned_cols=55 Identities=11% Similarity=0.026 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC---eEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT---EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g---~~~~a~~vI~~~~~~~ 288 (441)
.+-+.|.+.++..|++|+.+++|++|..+++.++ |++ ++ .+++||+||.+.+...
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEEcCCCCEEEEeCEEEECCCcch
Confidence 5566677778888999999999999998877654 443 34 3799999999888764
No 73
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.84 E-value=1.7e-08 Score=102.41 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe---CC--eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS---GT--EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~---~g--~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++++.+++|++|..+++++.+|.+ +| .+++||.||.+.+.+.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 356777888888899999999999999999998877764 35 4899999999888764
No 74
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.83 E-value=1.9e-08 Score=102.66 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCC----EEEEEEeCC---eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENG----KVVGVRSGT---EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~----~~~~v~~~g---~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++|+.+++|++|..+++ .++....++ .+++||.||.+.+.+.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 45677788888888999999999999998766 544333344 7899999999988875
No 75
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.82 E-value=5.7e-08 Score=100.24 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=48.0
Q ss_pred chHHHHHHHHHHHcC-cEEEcccceeEEEEeCCEEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYG-GTYMLDKPVDEIVIENGKVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~~~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.++|.+.+...| ++|++++.|++|..++++++||.. +|+ ++.|+.||.+++.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 468889999888888 999999999999988898888753 465 799999999887653
No 76
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.82 E-value=2.9e-08 Score=101.25 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHH-cCcEEEcccceeEEEE-eCC------EEEEEEe----CCe--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAI-YGGTYMLDKPVDEIVI-ENG------KVVGVRS----GTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~-~G~~i~~~~~V~~i~~-~~~------~~~~v~~----~g~--~~~a~~vI~~~~~~~ 288 (441)
..+.++|.+.++. .|++|++++.|++|.. +++ ++.||.. +|+ ++.|+.||.+++.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 4677788888888 6999999999999998 546 8888874 454 799999999877653
No 77
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.77 E-value=6.2e-08 Score=99.78 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeC-CEEEEEEeC----------------CeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIEN-GKVVGVRSG----------------TEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~~v~~~----------------g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++|+.+++|++|..++ +++++|.+. |.+++||.||.+.+.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 4677788888888999999999999998865 677778753 25899999999988764
No 78
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.77 E-value=2.9e-08 Score=97.12 Aligned_cols=56 Identities=13% Similarity=0.101 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEE--eCCe--EEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVR--SGTE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~--~~g~--~~~a~~vI~~~~~~~ 288 (441)
.+.+.|.+.+...|++|+++++|++|..+++..+.|. .+|+ +++||.||.+.+.+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 4556677777778999999999999986532223344 3776 799999999888764
No 79
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.76 E-value=5.7e-08 Score=98.12 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC---eEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT---EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g---~~~~a~~vI~~~~~~~ 288 (441)
.+-+.|.+.+++.|++|+.+++|++|..+++.++ |++ ++ .+++||+||.+.+...
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEcCCCcEEEEeCEEEEccCccc
Confidence 5666777778888999999999999988766554 443 44 3799999999888764
No 80
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.74 E-value=1.2e-07 Score=98.83 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHc-Cc-EEEcccceeEEEEeCC---EEEEEEe----CCe--EEEcCEEEECCCCC
Q psy2620 232 GELPQSFARLSAIY-GG-TYMLDKPVDEIVIENG---KVVGVRS----GTE--IARCKQVYCDPSYV 287 (441)
Q Consensus 232 ~~l~~~l~~~~~~~-G~-~i~~~~~V~~i~~~~~---~~~~v~~----~g~--~~~a~~vI~~~~~~ 287 (441)
..+...|.+.++.. |+ +|+.++.|++|..+++ +++||.. +|+ ++.|+.||.+++.+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 35677787778777 99 9999999999998777 8988863 453 69999999877654
No 81
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.73 E-value=2.5e-07 Score=92.72 Aligned_cols=56 Identities=20% Similarity=0.226 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe--CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS--GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~--~g~~~~a~~vI~~~~~~~ 288 (441)
..+.++|.+.++..|++++.+++| +|..+++++.+|.. ++.++.|+.||.+++.++
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 468888988888889999999999 99888899888875 345688999999887654
No 82
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.71 E-value=5.1e-08 Score=95.60 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=34.3
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4689999999999999999999999999999998763
No 83
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.70 E-value=1.1e-07 Score=93.53 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=52.2
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++++.+|.+ +|+++.||.||++++..|+
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 4678888888899999999999999999988888888887 6789999999999988764
No 84
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.69 E-value=1.4e-07 Score=95.90 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=36.9
Q ss_pred HcCcEEEcccceeEEEEeCCEEEEEEe--CC--eEEEcCEEEECCCCC
Q psy2620 244 IYGGTYMLDKPVDEIVIENGKVVGVRS--GT--EIARCKQVYCDPSYV 287 (441)
Q Consensus 244 ~~G~~i~~~~~V~~i~~~~~~~~~v~~--~g--~~~~a~~vI~~~~~~ 287 (441)
..+.++++++.|++|..+++++++|.. .+ .++.|+.||++++.+
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGAL 270 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHH
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEccccc
Confidence 346799999999999999999999985 33 568899999988865
No 85
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.68 E-value=4.8e-08 Score=100.23 Aligned_cols=56 Identities=11% Similarity=-0.061 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe---CC-eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS---GT-EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~---~g-~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+++.|++|+.+++|++|..+++.+. |.+ +| ++++||.||.+.+.+.
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 45667777778888999999999999987666544 443 56 6899999999988765
No 86
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.66 E-value=9.9e-09 Score=97.90 Aligned_cols=42 Identities=24% Similarity=0.221 Sum_probs=38.3
Q ss_pred cccEEEECCChhHHHHHhhhc--cCCCeEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLS--VSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La--~~G~~V~vlE~~~~~GG~~~t 45 (441)
++||+|||||++||+||++|+ ++|++|+|+|+++.+||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 589999999999999999997 469999999999999998743
No 87
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.65 E-value=9.6e-08 Score=99.47 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=35.1
Q ss_pred CcccEEEECCChhHHHHHhhhcc-CCCeEEEEcCCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSV-SGKKVLHIDRNKYYG 40 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE~~~~~G 40 (441)
.++||+|||||++||++|+.|++ +|.+|+|+||++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999987654
No 88
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.65 E-value=1.2e-08 Score=96.44 Aligned_cols=43 Identities=28% Similarity=0.434 Sum_probs=37.2
Q ss_pred CCC-cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDE-EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~-~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|++ +|||||||||++|++||.+|++.|++|+|+|++ .+||.+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 665 699999999999999999999999999999984 6787764
No 89
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.64 E-value=6.8e-08 Score=97.79 Aligned_cols=57 Identities=14% Similarity=0.150 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHHHcC-cEEEcccceeEEEEeC-C-EEEEEEe---CC-----eEEEcCEEEECCCCC
Q psy2620 231 LGELPQSFARLSAIYG-GTYMLDKPVDEIVIEN-G-KVVGVRS---GT-----EIARCKQVYCDPSYV 287 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~-~-~~~~v~~---~g-----~~~~a~~vI~~~~~~ 287 (441)
-.....++.+.+...| .+|++++.|++|..++ + +++||+. +| .+++|+.||++++.+
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 4455667777676665 8999999999999875 4 7999985 45 368899999988876
No 90
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.63 E-value=1.5e-08 Score=95.87 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=35.2
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
|++.|||||||||++|++||.+|+++|++|+++|++..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 88889999999999999999999999999999999763
No 91
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.63 E-value=2.8e-07 Score=91.98 Aligned_cols=59 Identities=8% Similarity=0.030 Sum_probs=50.2
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++++..|.++|+++.||.||.+++..|+
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 35678888888999999999999999998767877777778889999999998887653
No 92
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.63 E-value=1.6e-07 Score=96.06 Aligned_cols=55 Identities=11% Similarity=0.055 Sum_probs=41.4
Q ss_pred HHHHHHH-HHHHcCcEEEcccceeEEEEe----CCEEEEEEe---CC--eEEEcC-EEEECCCCCc
Q psy2620 234 LPQSFAR-LSAIYGGTYMLDKPVDEIVIE----NGKVVGVRS---GT--EIARCK-QVYCDPSYVQ 288 (441)
Q Consensus 234 l~~~l~~-~~~~~G~~i~~~~~V~~i~~~----~~~~~~v~~---~g--~~~~a~-~vI~~~~~~~ 288 (441)
-..++.+ .....+.+|++++.|++|.++ +++++||+. +| .+++|+ .||++++.+.
T Consensus 228 aa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp HHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred HHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 3444443 234568999999999999998 789999984 35 468887 5999998873
No 93
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.63 E-value=1.3e-07 Score=94.39 Aligned_cols=57 Identities=7% Similarity=0.018 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~ 288 (441)
...+.+.+.+.+++.|++++++++|++|..+++++ .|.+++.++.||.||.+++..|
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQEISCDSGIFALNLHP 244 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEESSCEEEESEEEECSCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEECCCEEEeCEEEECcCCCC
Confidence 35678888888899999999999999998767766 6777655899999999887765
No 94
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.62 E-value=2.9e-07 Score=94.38 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHH-cCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAI-YGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
.+.++|.+.++. .|+++ +++.|+.|..+++++++|.+ +|.++.|+.||.++|.++
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 466777777777 58888 67899999888888889987 578899999999988764
No 95
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.61 E-value=1.7e-08 Score=95.25 Aligned_cols=41 Identities=22% Similarity=0.198 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGES 43 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (441)
|+.|||||||||++|++||.+|+|+|++|+|+|++. +||..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~ 44 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRV 44 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCee
Confidence 557999999999999999999999999999999975 55543
No 96
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.60 E-value=1.2e-07 Score=96.03 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHHHcC-cEEEcccceeEEEEeC--CEEEEEEe---CC-----eEEEcCEEEECCCCC
Q psy2620 231 LGELPQSFARLSAIYG-GTYMLDKPVDEIVIEN--GKVVGVRS---GT-----EIARCKQVYCDPSYV 287 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~--~~~~~v~~---~g-----~~~~a~~vI~~~~~~ 287 (441)
-.....++.+.+...| .+|++++.|++|..++ +++++|+. +| .+++|+.||++++.+
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 4555666667677776 8999999999999874 38999985 45 468999999998876
No 97
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.58 E-value=3.6e-07 Score=90.57 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEE--eCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVI--ENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|.. +++++.+|.+ +|+++.||.||.+++..|+
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 56778888888999999999999999986 5677777776 6788999999999887764
No 98
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.58 E-value=2.5e-07 Score=92.80 Aligned_cols=59 Identities=17% Similarity=0.046 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++++..+..+|+++.||.||.+++..|+
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 45778888888999999999999999998767776533347889999999999988764
No 99
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.54 E-value=5.6e-07 Score=93.52 Aligned_cols=55 Identities=5% Similarity=0.055 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHc--CcEEEcccceeEEEEeCC---EEEEEEe----CC--eEEEcCEEEECCCC
Q psy2620 232 GELPQSFARLSAIY--GGTYMLDKPVDEIVIENG---KVVGVRS----GT--EIARCKQVYCDPSY 286 (441)
Q Consensus 232 ~~l~~~l~~~~~~~--G~~i~~~~~V~~i~~~~~---~~~~v~~----~g--~~~~a~~vI~~~~~ 286 (441)
..+..+|.+.++.. |++|+.++.|.+|..+++ ++.||.. +| ..+.|+.||.+++-
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 46888888888887 999999999999998776 9999863 34 46899999987764
No 100
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.51 E-value=6.5e-08 Score=93.56 Aligned_cols=41 Identities=22% Similarity=0.226 Sum_probs=37.0
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
|..++||||||||++|+++|+.|+++|++|+|||++...+|
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 45679999999999999999999999999999999885544
No 101
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.50 E-value=6.8e-07 Score=87.11 Aligned_cols=57 Identities=9% Similarity=0.051 Sum_probs=47.3
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.++..|++++++++|++|..+++. +.|.+ +|+++.||.||.+++..|+
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCCcC
Confidence 467788888888999999999999999876665 35555 6788999999999988764
No 102
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.49 E-value=4.6e-07 Score=92.50 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHhhhcc-CCCeEEEEcCCCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSV-SGKKVLHIDRNKYYGG 41 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE~~~~~GG 41 (441)
+||+||||||.+|+++|.+|++ .|++|+|||+.+...+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999998 7999999999877643
No 103
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.48 E-value=4.1e-08 Score=98.40 Aligned_cols=45 Identities=27% Similarity=0.296 Sum_probs=41.4
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
|+.+|||+|||||++|++||..|++.|++|+++|+++.+||.|..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 777899999999999999999999999999999999999998753
No 104
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.46 E-value=5.9e-08 Score=99.08 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=42.7
Q ss_pred hHHHHHHHHHH-HcCcEEEcccceeEEEEeC-CEEEEEEe--C--C--eEEEcC-EEEECCCCC
Q psy2620 233 ELPQSFARLSA-IYGGTYMLDKPVDEIVIEN-GKVVGVRS--G--T--EIARCK-QVYCDPSYV 287 (441)
Q Consensus 233 ~l~~~l~~~~~-~~G~~i~~~~~V~~i~~~~-~~~~~v~~--~--g--~~~~a~-~vI~~~~~~ 287 (441)
....++.+.+. ..|.+|++++.|++|..++ ++++||+. + | .+++|+ .||++++.+
T Consensus 209 s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 209 SSSVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp CHHHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 34556555443 5789999999999999987 88999985 2 5 378998 899988864
No 105
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.46 E-value=6.6e-08 Score=93.37 Aligned_cols=58 Identities=16% Similarity=0.107 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe---CC--eEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS---GT--EIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~---~g--~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.|.+..+..|++++++++|++|..+++++.+|.+ +| +++.+|.||.+++..|+
T Consensus 202 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 202 GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 456777777788889999999999999888787767765 66 68999999999887664
No 106
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.45 E-value=7e-08 Score=97.39 Aligned_cols=43 Identities=28% Similarity=0.427 Sum_probs=38.6
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+.+|||+|||||++|++||..|++.|++|+++|+++.+||.|.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 3469999999999999999999999999999999999999764
No 107
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.43 E-value=1.1e-07 Score=93.51 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=35.7
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCe-EEEEcCCCCCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKK-VLHIDRNKYYGG 41 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~-V~vlE~~~~~GG 41 (441)
|+..+||+|||||++||++|..|+++|.+ |+|+|+++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 77789999999999999999999999999 999999887654
No 108
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.43 E-value=8.5e-08 Score=91.49 Aligned_cols=44 Identities=16% Similarity=0.257 Sum_probs=40.1
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+..+||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 34569999999999999999999999999999999999999874
No 109
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.40 E-value=1.3e-07 Score=90.77 Aligned_cols=43 Identities=23% Similarity=0.298 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
+++||+|||||++|+++|..|+++|++|+|+|+++.+||.+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 3689999999999999999999999999999999999998754
No 110
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.38 E-value=1.7e-07 Score=88.84 Aligned_cols=44 Identities=23% Similarity=0.395 Sum_probs=38.4
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
|+..+||+|||||++|++||..|+++|++|+|+|+ ..+||.+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 55579999999999999999999999999999999 567887643
No 111
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.36 E-value=1.5e-07 Score=94.27 Aligned_cols=58 Identities=7% Similarity=-0.002 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEE-e-CCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVR-S-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~-~-~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++..+.|. + +|+ +.||.||.+++..|+
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 356788888889999999999999999987655445677 6 566 999999999887653
No 112
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.36 E-value=2.7e-07 Score=91.95 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=40.5
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCC--eEEEEcCCCCCCCcccc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNKYYGGESAS 45 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~~~GG~~~t 45 (441)
+..+||+|||||++||+||.+|++.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 456899999999999999999999999 99999999999998754
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.36 E-value=1.5e-07 Score=94.84 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=47.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++++ .|.+ +|+++.||.||.+++..|+
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCY-NVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE-EEEECCCcEEEcCEEEEeeCCCcC
Confidence 4678888888899999999999999998766664 5665 6788999999998887653
No 114
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.35 E-value=1e-06 Score=86.73 Aligned_cols=57 Identities=12% Similarity=-0.038 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+ +++.+|.+ +|+++.||.||.+++..|+
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE-GQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS-SSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc-CcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 456777888888999999999999999754 35567776 7889999999999988764
No 115
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.35 E-value=3e-07 Score=90.11 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=36.8
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
++.+||+|||||++||++|..|+++|.+|+|+|+++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 35689999999999999999999999999999998876543
No 116
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.34 E-value=1.2e-06 Score=87.20 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+ +++..|.++++++.||.||.+++..|+
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVTDKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEESSCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEECCCEEECCEEEECcCCCCC
Confidence 467788888888999999999999999754 555566777888999999998887653
No 117
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.33 E-value=2.4e-07 Score=87.93 Aligned_cols=42 Identities=19% Similarity=0.326 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
..+||+|||||++|++||..|++.|++|+++|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 4689999999999999999999999999999998 68887754
No 118
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.33 E-value=2.6e-07 Score=87.26 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
.+||+|||||++|++||..|+++|++|+|+|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999998 8888754
No 119
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.33 E-value=2.7e-07 Score=87.62 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCCCCcc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYYGGES 43 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~GG~~ 43 (441)
+|||||||||++||+||++|+++ |++|+|+|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999988764
No 120
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.33 E-value=2.4e-07 Score=88.24 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCC----CCCCCccccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN----KYYGGESASI 46 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~----~~~GG~~~t~ 46 (441)
..+||+|||||++||+||..|+++|++|+|+|++ ..+||.+...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 4689999999999999999999999999999994 4889887643
No 121
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.32 E-value=1.4e-07 Score=94.95 Aligned_cols=44 Identities=14% Similarity=0.292 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 55679999999999999999999999999999999999999764
No 122
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.31 E-value=1.9e-07 Score=88.71 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=39.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 48999999999999999999999999999999999999884
No 123
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.30 E-value=3.4e-07 Score=93.03 Aligned_cols=58 Identities=17% Similarity=0.073 Sum_probs=46.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-CCEE--EEEEe-CCe-EEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-NGKV--VGVRS-GTE-IARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~--~~v~~-~g~-~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+ ++++ +.|++ +|+ ++.||.||.+++..|+
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 467888888899999999999999999864 4444 34555 556 8999999999988774
No 124
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.30 E-value=3e-07 Score=92.09 Aligned_cols=57 Identities=5% Similarity=0.061 Sum_probs=48.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++. +.|.++++++.||.||.+++.+|+
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGE-FVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTE-EEEEETTEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEECCcEEEcCEEEECCCCCcC
Confidence 467888888899999999999999999876554 456777888999999999887764
No 125
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.29 E-value=2e-07 Score=93.81 Aligned_cols=44 Identities=34% Similarity=0.424 Sum_probs=40.6
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+.++||||||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 55679999999999999999999999999999999999998764
No 126
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.29 E-value=2.8e-07 Score=92.20 Aligned_cols=57 Identities=11% Similarity=0.023 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCe-EEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTE-IARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~-~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++. ..|.+ +|+ ++.+|.||.+++..|+
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 356777888888999999999999999876555 45665 677 8999999998876653
No 127
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.28 E-value=3e-07 Score=91.65 Aligned_cols=58 Identities=3% Similarity=-0.022 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++..+.|.+ +|+++.+|.||.+++..|+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 357788888888999999999999999875433345555 6778999999998876653
No 128
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.28 E-value=4.4e-07 Score=93.99 Aligned_cols=43 Identities=30% Similarity=0.479 Sum_probs=38.1
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGES 43 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (441)
|+..|||||||+|++|++||..|+++|++|+|+|+.+..||.+
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4457999999999999999999999999999999999999855
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.27 E-value=4e-07 Score=92.46 Aligned_cols=44 Identities=27% Similarity=0.383 Sum_probs=39.2
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC--------CCCCcccc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK--------YYGGESAS 45 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~--------~~GG~~~t 45 (441)
+.+|||+|||||++|++||..|++.|++|+++|+++ .+||.+..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 346999999999999999999999999999999965 78987643
No 130
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.27 E-value=4.3e-07 Score=85.67 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCCCCcc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYYGGES 43 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~GG~~ 43 (441)
++||+|||+|++||+||+.|+++ |++|+|+|+++.+||..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 57999999999999999999998 99999999999998764
No 131
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.26 E-value=4.2e-07 Score=89.29 Aligned_cols=58 Identities=16% Similarity=0.128 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHHHcCcEEEccccee---------EEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVD---------EIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~---------~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.++|.+.+++.|++++.+++|+ +|..+++++ +|++++.+++||.||.+++.|..
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g~i~a~~VV~A~G~~s~ 237 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETRQIRAGVIIVAAGAAGP 237 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCcEEECCEEEECCCccHH
Confidence 36789999999999999999999999 887666665 67776568999999999998864
No 132
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.25 E-value=4.7e-07 Score=90.93 Aligned_cols=58 Identities=9% Similarity=0.027 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCC---eEEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGT---EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g---~~~~a~~vI~~~~~~~ 288 (441)
...+.+.+.+.++..|++++++++|++|..+++.+.....++ +++.+|.||.+++..|
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 356788888888999999999999999987665543222333 6899999999887654
No 133
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.24 E-value=4.9e-07 Score=81.62 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHc-CcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 234 LPQSFARLSAIY-GGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 234 l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
+.+.|.+.++.. |++++ +++|++|..+++++++|.+ +|++++||.||.+.+.+..
T Consensus 70 ~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 334455556666 88887 6799999988888888887 5678999999999988753
No 134
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.24 E-value=6.1e-07 Score=87.26 Aligned_cols=53 Identities=8% Similarity=0.018 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.+...|++|+++++|++|.. ++ .|++ +|++++||.||.+.+..+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-VG---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-TT---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC---EEEECCCCEEEcCEEEECCCccH
Confidence 45667777778888999999999999976 55 4554 678899999999988765
No 135
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.24 E-value=5e-07 Score=92.17 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=46.0
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccccCchHHHhhhhCCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFSKFGSTLPD 62 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~g~~~d~p~ 62 (441)
..+||||||||++|+.+|..|++.|++|+|+|+++.+||.+.... +++...|.|+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~-----ypg~~~dv~s 74 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR-----YPGARCDVES 74 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC-----CTTCBCSSCT
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC-----CCCceeCCCc
Confidence 358999999999999999999999999999999999999885433 3466555543
No 136
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.23 E-value=4e-07 Score=91.81 Aligned_cols=40 Identities=25% Similarity=0.310 Sum_probs=36.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+|||+|||||++|++||..|++.|++|+++|++. +||.+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 4999999999999999999999999999999975 888763
No 137
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.22 E-value=5.5e-07 Score=91.93 Aligned_cols=43 Identities=28% Similarity=0.274 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
..+||||||||++|+++|..|+++|++|+|+|+++.+||.+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 4689999999999999999999999999999999999998753
No 138
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.22 E-value=4.6e-07 Score=85.70 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=46.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-C----C--eEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-G----T--EIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~----g--~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++++.+|.+ + | +++.+|.||.+++..|+
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 456677777788899999999999999876667766764 2 4 68999999999887653
No 139
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=4.7e-07 Score=90.98 Aligned_cols=58 Identities=3% Similarity=-0.056 Sum_probs=45.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeC-CEEEEEEe-CC-eEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIEN-GKVVGVRS-GT-EIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~~v~~-~g-~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.++..|++++++++|++|..++ ++++.|.+ +| +++.+|.||.+++..|+
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 4577788888889999999999999998643 32345665 67 78999999998886554
No 140
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.20 E-value=4.8e-07 Score=90.93 Aligned_cols=41 Identities=20% Similarity=0.337 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
..|||+|||||++|++||..|++.|++|+++|++ .+||.+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~ 59 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCV 59 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccc
Confidence 4699999999999999999999999999999976 7888764
No 141
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.20 E-value=5.3e-07 Score=90.31 Aligned_cols=41 Identities=24% Similarity=0.381 Sum_probs=38.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+|||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999999999864
No 142
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.20 E-value=5.5e-07 Score=86.99 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~t 45 (441)
++||+|||||++|+++|..|++.|+ +|+|+|+++ +||.+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 6899999999999999999999999 999999999 8887643
No 143
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.19 E-value=5.7e-07 Score=84.69 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEE-EcCCCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLH-IDRNKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~v-lE~~~~~GG~~~t 45 (441)
.++||+|||||++||+||..|+++|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 778988753
No 144
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=7.2e-07 Score=89.41 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=39.9
Q ss_pred CCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3569999999999999999999999999999999999999864
No 145
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.19 E-value=4.3e-07 Score=91.61 Aligned_cols=58 Identities=7% Similarity=0.040 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..++++.+.|.+ +|+++.||.||.+++..|+
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 467788888889999999999999999875443345665 6788999999999887664
No 146
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.17 E-value=8.5e-07 Score=89.32 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcC--------CCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDR--------NKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~--------~~~~GG~~~t 45 (441)
.+|||+|||||++|++||..|++.|++|+++|+ +..+||.|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 369999999999999999999999999999998 5678997743
No 147
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.16 E-value=7.7e-07 Score=84.89 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=38.3
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
|+..+||+|||||++|++||..|++.|++|+++|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 345689999999999999999999999999999975 67887643
No 148
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.16 E-value=9.2e-06 Score=83.27 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-------------------CCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-------------------NGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-------------------~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|+++++++.|++|..+ ++++..+..+|+++.||.||.+++..|+
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 467777888888999999999999999863 5554433447789999999998887653
No 149
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.16 E-value=7.1e-07 Score=89.57 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
.++||||||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 368999999999999999999999999999999999999864
No 150
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.15 E-value=6.3e-07 Score=86.10 Aligned_cols=49 Identities=6% Similarity=-0.069 Sum_probs=39.4
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcccc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQDRV 291 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~~~ 291 (441)
...+.++|.+.+++.|++++. ++|++|...+ .++||.||.+++.|...+
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~l 189 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAGAL 189 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChHhh
Confidence 468899999999999999988 8998874321 267999999999887554
No 151
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.15 E-value=8.1e-07 Score=88.67 Aligned_cols=58 Identities=19% Similarity=0.081 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
...+.+.+.+.+++.|++++++++|++|..+++. +.+.+ +|+++.+|.||.+++..|.
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCCcC
Confidence 3567888888888999999999999999877665 34554 6788999999998887653
No 152
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.14 E-value=1.1e-06 Score=89.61 Aligned_cols=43 Identities=28% Similarity=0.386 Sum_probs=40.0
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 46 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 46 (441)
.+||||||||++|+.+|..|++.|++|+|+|+++.+||.+...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~ 51 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN 51 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC
Confidence 5899999999999999999999999999999999999987533
No 153
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.13 E-value=1.2e-06 Score=87.28 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
..+||+|||||++||+||.+|+++|++|+|+|+++.+||.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 357999999999999999999999999999999999999753
No 154
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.13 E-value=1.1e-06 Score=81.94 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
++||+|||||++|++||..|+++|++|+++|+++..++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~ 39 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR 39 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc
Confidence 48999999999999999999999999999999875543
No 155
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.13 E-value=1.6e-06 Score=87.53 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=36.8
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
..+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 3589999999999999999999999999999999888754
No 156
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.13 E-value=1.5e-06 Score=88.64 Aligned_cols=56 Identities=9% Similarity=0.070 Sum_probs=46.2
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-CCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-NGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++..|++++.+ .|++|..+ ++.+++|.+ +|++++||.||.+.|.+.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 578888888888899999999 89999874 455677776 567899999999888764
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.12 E-value=1.1e-06 Score=92.40 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=39.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
..+||||||||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 458999999999999999999999999999999999999864
No 158
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.12 E-value=7.6e-07 Score=84.71 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=38.1
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcC----CCCCCCcccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDR----NKYYGGESAS 45 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~----~~~~GG~~~t 45 (441)
..+||+|||||++|+++|..|+++|++|+++|+ ....||.+..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 358999999999999999999999999999999 6677887643
No 159
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.12 E-value=1.1e-06 Score=89.49 Aligned_cols=43 Identities=23% Similarity=0.235 Sum_probs=39.8
Q ss_pred cccEEEECCChhHHHHHhhhc-cCCCeEEEEcCCCCCCCccccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLS-VSGKKVLHIDRNKYYGGESASI 46 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La-~~G~~V~vlE~~~~~GG~~~t~ 46 (441)
.+||||||||++|+++|..|+ +.|++|+|+|+++.+||.+...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~ 51 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN 51 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc
Confidence 489999999999999999999 9999999999999999987543
No 160
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.12 E-value=1.4e-06 Score=88.99 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
++||+|||||++||++|..|+++|.+|+|+||++.++..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~ 64 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH 64 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 589999999999999999999999999999999876543
No 161
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.09 E-value=1.1e-06 Score=87.92 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe--CC--eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS--GT--EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~--~g--~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.++..|++++++++|++|..+++++ .+.+ +| +++.+|.||.+.+..|
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQV-TVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCE-EEEEESSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeE-EEEEEcCCceEEEEcCEEEECCCCCc
Confidence 4567778888889999999999999998655443 3443 56 6899999999887655
No 162
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=1.7e-06 Score=81.42 Aligned_cols=40 Identities=15% Similarity=0.264 Sum_probs=36.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCCCCCCcccc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYYGGESAS 45 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~t 45 (441)
|||+|||||++|++||..|++.|+ +|+|+|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 67887643
No 163
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.09 E-value=1.3e-06 Score=88.03 Aligned_cols=58 Identities=12% Similarity=-0.015 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++..+.|.+ +|+++.||.||.+++..|+
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 467888888899999999999999999876543345665 6778999999999887664
No 164
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.07 E-value=2e-06 Score=86.06 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=38.9
Q ss_pred ccEEEECCChhHHHHHhhhcc---CCCe---EEEEcCCCCCCCcccc
Q psy2620 5 YDAIVLGTGLKECILSGMLSV---SGKK---VLHIDRNKYYGGESAS 45 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~---~G~~---V~vlE~~~~~GG~~~t 45 (441)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998864
No 165
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.07 E-value=1.8e-06 Score=86.85 Aligned_cols=57 Identities=7% Similarity=-0.048 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC-----eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT-----EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g-----~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.+++.|+++++++.|++|..+++..+.|.. ++ .++.+|.||.+++..|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 467788888889999999999999999874432233443 22 3799999999888655
No 166
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.06 E-value=1.6e-06 Score=88.82 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHc-CcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 233 ELPQSFARLSAIY-GGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 233 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
.+.+.|.+.++.. |++++ +..|+.|..+++++.+|.+ +|+++.|+.||.++|.++
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4556666667664 88884 6699999888888888887 678899999999888764
No 167
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.06 E-value=1.9e-06 Score=88.12 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=45.6
Q ss_pred chHHHHHHHHHHH-cCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAI-YGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++. .|++| +++.|++|..+++++++|.+ +|.++.|+.||.++|.++
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 3466777777777 48888 68899999988888989987 678899999999888764
No 168
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.06 E-value=1.4e-06 Score=87.19 Aligned_cols=56 Identities=13% Similarity=-0.045 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe--C--Ce--EEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS--G--TE--IARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~--~--g~--~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.++..|++++++++|++|..+++.+ .|.+ + |+ ++.+|.||.+++..|
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE-EEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEE-EEEEeecCCCceeEEEcCEEEECCCccc
Confidence 4677788888889999999999999998776654 3443 5 75 899999999887655
No 169
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.05 E-value=2.2e-06 Score=83.80 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.8
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
+|+|||||++||++|..|+++|++|+|+||.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 6999999999999999999999999999997644
No 170
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.03 E-value=3.7e-06 Score=80.53 Aligned_cols=40 Identities=18% Similarity=0.029 Sum_probs=36.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+||+|||||++|+.||..|+++|++|+++|++...+...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 6999999999999999999999999999999886665543
No 171
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=2e-06 Score=85.81 Aligned_cols=56 Identities=9% Similarity=-0.028 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe----CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS----GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~----~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.+++.|++++++++|++|..+++.+ .+.+ +++++.+|.||.+++..|
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGV-TVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEE-EEEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeE-EEEEEeCCceeEEEcCEEEECcCCCc
Confidence 4577788888889999999999999998766553 3432 346899999999887655
No 172
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=1.7e-06 Score=86.30 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=38.0
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
.++||||||||++|++||..|++.|++|+++|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 358999999999999999999999999999999 78998874
No 173
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.01 E-value=2.2e-06 Score=84.83 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999976
No 174
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.01 E-value=1.8e-06 Score=87.82 Aligned_cols=38 Identities=32% Similarity=0.513 Sum_probs=34.4
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999876543
No 175
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.01 E-value=1.7e-06 Score=87.33 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=46.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++++ .|.. +|+++.||.||++++..|+
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGV-LVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEE-EEEECCCcEEEcCEEEECCCCCcC
Confidence 3677888888899999999999999998765554 4554 6788999999998887764
No 176
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.00 E-value=2.8e-06 Score=82.60 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=32.7
Q ss_pred cEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYY 39 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~ 39 (441)
||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999999 9999999998876
No 177
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=2.5e-06 Score=86.09 Aligned_cols=58 Identities=12% Similarity=-0.031 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeE-EEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEI-ARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~-~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+++..+.|.+ +|++ +.+|.||.+++..|+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 467788888899999999999999999864322234555 6776 999999998887664
No 178
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.99 E-value=3.8e-06 Score=85.98 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCC-CeEEEEcCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSG-KKVLHIDRNKY 38 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~~ 38 (441)
++||+||||||.+||++|.+|++.| .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999765
No 179
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.99 E-value=3.7e-06 Score=85.95 Aligned_cols=56 Identities=14% Similarity=0.174 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHHc-CcEEEcccceeEEEEe-CCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIY-GGTYMLDKPVDEIVIE-NGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++.. |++++.+ +|++|..+ ++.+++|.+ +|+++.||.||.+.+.+.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 46888899989888 9999999 99999874 466777876 577899999999988764
No 180
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=3.8e-06 Score=78.95 Aligned_cols=39 Identities=18% Similarity=0.365 Sum_probs=35.3
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+|||+|||||++|++||..|+++|++|+++|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 4788764
No 181
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.98 E-value=2.9e-06 Score=86.12 Aligned_cols=58 Identities=7% Similarity=-0.114 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCc
Q psy2620 231 LGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~ 288 (441)
-.++.+.+.+.++..|..+++++.|+++...++.+.....++.++.+|.|+++.+..|
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 3568888888899999999999999999988776543334677889999999887655
No 182
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.97 E-value=3.7e-06 Score=72.41 Aligned_cols=33 Identities=33% Similarity=0.485 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|||+|||||++|+.+|..|++.|.+|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999976
No 183
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.97 E-value=3.8e-06 Score=88.70 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=39.3
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
.+||+|||||++|+.||..|+++|++|+|+|+++.+||.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 479999999999999999999999999999999999998743
No 184
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.97 E-value=3.3e-06 Score=85.86 Aligned_cols=56 Identities=13% Similarity=0.091 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHH-cCcEEEcccceeEEEEe-CCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAI-YGGTYMLDKPVDEIVIE-NGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~-~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++. .|++++.+ .|++|..+ ++.+++|.+ +|++++||.||.+.+.+.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 4677888888888 89999999 69999875 455667776 567799999999888764
No 185
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.93 E-value=2.7e-06 Score=85.68 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=38.2
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (441)
.+||+|||||++|++||..|+++ ++|+|+|+++++||.+..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 47999999999999999999999 999999999999998753
No 186
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.92 E-value=5.1e-06 Score=84.81 Aligned_cols=55 Identities=11% Similarity=0.124 Sum_probs=42.7
Q ss_pred HHHHHHHHHHH-cCcEEEcccceeEEEEeCCEEEEEEe-C---Ce--EE---EcCEEEECCCCCc
Q psy2620 234 LPQSFARLSAI-YGGTYMLDKPVDEIVIENGKVVGVRS-G---TE--IA---RCKQVYCDPSYVQ 288 (441)
Q Consensus 234 l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~~~~~~v~~-~---g~--~~---~a~~vI~~~~~~~ 288 (441)
-..++.+.+.. .|.+|++++.|++|..++++++||+. + |+ ++ .++.||++++.+.
T Consensus 197 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 197 PVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HHHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 34556666654 58999999999999999889999986 3 53 33 7789999988763
No 187
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.91 E-value=3.6e-06 Score=84.07 Aligned_cols=40 Identities=25% Similarity=0.226 Sum_probs=36.8
Q ss_pred CcccEEEECCChhHHHHHhhhccCC-----CeEEEEcCCCCCCCc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSG-----KKVLHIDRNKYYGGE 42 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G-----~~V~vlE~~~~~GG~ 42 (441)
..+||||||||++|++||..|++.| .+|+|+|+++.+|..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~ 73 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWH 73 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCc
Confidence 3579999999999999999999999 999999999998844
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.89 E-value=7.1e-06 Score=85.89 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=38.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
.+||||||||++|+.||..|++.|++|+|+|+++.+||.+.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 57999999999999999999999999999999999999864
No 189
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.89 E-value=4.1e-06 Score=84.82 Aligned_cols=56 Identities=13% Similarity=0.146 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe-CCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE-NGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++..|++++.+ +|++|..+ ++.+++|++ +|++++||.||.+.+.+.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 577888888888899999999 99999874 566677876 567899999999888764
No 190
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.89 E-value=4.2e-06 Score=91.05 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=39.2
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
.+||||||+|++|++||.+|+++|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999876
No 191
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.84 E-value=5.9e-06 Score=82.33 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=38.2
Q ss_pred cccEEEECCChhHHHHHhhhcc-C------CCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSV-S------GKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 44 (441)
.+||+|||||++|+.||..|++ . |++|+|+|+++.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 6899999999999999999999 7 999999999999998763
No 192
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.81 E-value=1e-05 Score=82.00 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=36.3
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
..+||+|||||++|++||.+|+++|++|+++|+ ..||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999996 5788764
No 193
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.79 E-value=1.1e-05 Score=80.14 Aligned_cols=56 Identities=13% Similarity=0.009 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++. +++++++.|++|..++ ++..+..+++++.||.||.+++..|+
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccC
Confidence 45677777777878 9999999999997543 45556678899999999999887663
No 194
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.79 E-value=9.7e-06 Score=83.72 Aligned_cols=41 Identities=27% Similarity=0.310 Sum_probs=35.8
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCC-C-------CCCCcc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN-K-------YYGGES 43 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~-~-------~~GG~~ 43 (441)
..|||+|||||++|++||.+|++.|++|+|+|+. + .+||.+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~ 154 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTC 154 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHH
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceE
Confidence 4689999999999999999999999999999983 2 367754
No 195
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.77 E-value=1.3e-05 Score=87.91 Aligned_cols=40 Identities=23% Similarity=0.384 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCCCCCCCcc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYYGGES 43 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~ 43 (441)
.+||+|||||++|++||.+|+++|+ +|+|+|+++.+||..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 4799999999999999999999999 799999999999975
No 196
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.76 E-value=1.3e-05 Score=83.70 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=33.6
Q ss_pred cccEEEECCChhHHHHHhhhcc-----CCCeEEEEcCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSV-----SGKKVLHIDRNKYY 39 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~-----~G~~V~vlE~~~~~ 39 (441)
++||+|||||++||++|..|++ +|.+|+|+|+++..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999998654
No 197
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.69 E-value=1.7e-05 Score=79.12 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=38.1
Q ss_pred CcccEEEECCChhHHHHHhhhccCC--CeEEEEcCCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSG--KKVLHIDRNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G--~~V~vlE~~~~~GG~~~ 44 (441)
..+||+|||+|++|+.||..|++.| ++|+|+|+++.+||.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3589999999999999999999998 99999999999998763
No 198
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.68 E-value=2.1e-05 Score=77.92 Aligned_cols=39 Identities=26% Similarity=0.393 Sum_probs=36.0
Q ss_pred CCCcccEEEECCChhHHHHHhhhcc---CCCeEEEEcCCCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSV---SGKKVLHIDRNKYY 39 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~---~G~~V~vlE~~~~~ 39 (441)
|+.+.||||||||++|++||..|++ .|++|+|+|++++.
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 6667899999999999999999999 89999999999864
No 199
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.67 E-value=2.1e-05 Score=79.13 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=47.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|+++++++.|++|..+++++ .|.+ +|+++.||.||.+++..|+
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKL-LIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeE-EEEECCCCEEECCEEEECCCCCcc
Confidence 4577788888899999999999999998766654 5665 6789999999999887664
No 200
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.66 E-value=1.7e-05 Score=78.30 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=36.0
Q ss_pred ccEEEECCChhHHHHHhhhcc--CCCeEEEEcCCCCCCCcc
Q psy2620 5 YDAIVLGTGLKECILSGMLSV--SGKKVLHIDRNKYYGGES 43 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~--~G~~V~vlE~~~~~GG~~ 43 (441)
.||||||||++|++||.+|++ .|++|+|+|+++..++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 699999999999999999999 899999999999887643
No 201
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.62 E-value=2.9e-05 Score=79.95 Aligned_cols=54 Identities=9% Similarity=0.018 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.++..|++++++++|++|..+++. |.+ +|+++.||.||.+++..|
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV---VRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE---EEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE---EEECCCCEEEcCEEEEccCCCC
Confidence 567888888899999999999999999754443 444 678999999999888765
No 202
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.60 E-value=3.4e-05 Score=75.70 Aligned_cols=53 Identities=19% Similarity=0.165 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|. ++ .|.+ +|+++.||.||.+++..|+
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCCcc
Confidence 4577788888899999999999999997 44 4554 6789999999999887764
No 203
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.56 E-value=2.3e-05 Score=76.82 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|. .+. |.+ +|+++.+|.||.+++..++
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~--~~~---v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR--EHE---IVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC--SSE---EEETTSCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC--CCe---EEECCCCEEeeeEEEECCCCCcc
Confidence 4677888888899999999999999985 233 444 7889999999998887654
No 204
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.55 E-value=3.5e-05 Score=77.52 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=46.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|.. ++++..|.++|+++.||.||.+++..|+
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIITDKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEESSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEECCcEEECCEEEECCCCCcC
Confidence 46777888888899999999999999975 5555566678889999999998887653
No 205
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.55 E-value=4.4e-05 Score=78.43 Aligned_cols=37 Identities=32% Similarity=0.484 Sum_probs=34.1
Q ss_pred CcccEEEECCChhHHHHHhhhcc-CCCeEEEEcCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSV-SGKKVLHIDRNKYY 39 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE~~~~~ 39 (441)
.+||+||||+|.+|+++|.+|++ .|++|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 89999999998655
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.51 E-value=4.9e-05 Score=76.22 Aligned_cols=57 Identities=9% Similarity=0.084 Sum_probs=47.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|..+ +++..|.+++.++.||.||.+++..|+
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVETDKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEETTEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEECCCEEEcCEEEECcCCCcC
Confidence 467788888889999999999999999754 566677777789999999999887653
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=6.6e-05 Score=72.47 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.+++.|++++++++|++|. .+ +|.+ +|+ +.+|.||.+++..|+
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCCcC
Confidence 3567778888899999999999999986 22 3555 456 999999998887664
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.18 E-value=0.00029 Score=68.44 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=35.2
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
...|||||||++|+.||..|++.|.+|+++|++++++.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 47899999999999999999888999999999998774
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.13 E-value=0.00026 Score=71.24 Aligned_cols=56 Identities=9% Similarity=-0.028 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CC----eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GT----EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g----~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+.+++.|+++++++.|++|. +++....+.. +| +++.||.||.+++.-|
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~-~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVE-EKQLLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEC-SSEEEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEe-CCceEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 5677788888899999999999999984 2232233333 44 4799999999887654
No 210
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.04 E-value=0.00031 Score=69.40 Aligned_cols=52 Identities=8% Similarity=0.084 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
..+.+.+.+..++.|+++++++.|+++. +.. |.+ +|+++.+|.||.+.+..|
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~~---v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN--GNE---ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE--TTE---EEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec--CCe---eeecCCeEEeeeeEEEEeceec
Confidence 5677778888899999999999999874 333 333 788999999999887655
No 211
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.02 E-value=0.00028 Score=69.56 Aligned_cols=57 Identities=21% Similarity=0.175 Sum_probs=40.7
Q ss_pred CcchHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeC--CeEEEcCEEEECCCCCc
Q psy2620 230 GLGELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSG--TEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 230 G~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~--g~~~~a~~vI~~~~~~~ 288 (441)
+.....+.+.+..++.|+++++++.|++|. .++++....+ ++++.+|.||.+++.-+
T Consensus 198 ~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 198 GIGASKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp CSTTHHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred hhHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCCC
Confidence 345566667777889999999999999984 4443322223 36899999998776544
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.99 E-value=0.00029 Score=68.68 Aligned_cols=46 Identities=7% Similarity=-0.073 Sum_probs=35.6
Q ss_pred HHHcCcEEEcccceeEEEEeCCEEEEEEe-CCeEEEcCEEEECCCCCc
Q psy2620 242 SAIYGGTYMLDKPVDEIVIENGKVVGVRS-GTEIARCKQVYCDPSYVQ 288 (441)
Q Consensus 242 ~~~~G~~i~~~~~V~~i~~~~~~~~~v~~-~g~~~~a~~vI~~~~~~~ 288 (441)
.+..|.++++++.|+.+..+++.. .|.+ +|+++.+|.||.+++.-+
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~-~v~~~~g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAM-TVETSFGETFKAAVINLIPPQRA 258 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTT-EEEETTSCEEECSEEEECCCEEE
T ss_pred HHhcCcEEEeCceEEEEEecccce-EEEcCCCcEEEeeEEEEecCcCC
Confidence 356799999999999998765543 3554 789999999998876544
No 213
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.93 E-value=0.00011 Score=74.10 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=26.1
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
+.|||||||+|++||++|+.|.++|...+++|+.+..|
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~ 75 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHA 75 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----C
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCC
Confidence 34899999999999999999987655444444433333
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.78 E-value=0.0071 Score=59.72 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=34.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
..+++|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 46899999999999999999999999999999887654
No 215
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.69 E-value=0.0083 Score=55.92 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=33.2
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
.|+|||||..|+=+|..|++.|.+|+++|+.+.+-.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 699999999999999999999999999999887643
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.69 E-value=0.0065 Score=58.80 Aligned_cols=38 Identities=18% Similarity=0.064 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999877554
No 217
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.58 E-value=0.0094 Score=48.13 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|||+|..|...|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999853
No 218
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.56 E-value=0.0086 Score=49.70 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|||+|..|+.+|..|.+.|++|++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 219
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.47 E-value=0.011 Score=48.02 Aligned_cols=33 Identities=39% Similarity=0.605 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|+|+|..|...|..|+++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999853
No 220
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.46 E-value=0.01 Score=48.29 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|||.|..|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999864
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.40 E-value=0.014 Score=48.31 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.-.++|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999863
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.21 E-value=0.011 Score=58.58 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-+|+|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999987654
No 223
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.19 E-value=0.013 Score=58.23 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999887643
No 224
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.18 E-value=0.016 Score=53.45 Aligned_cols=37 Identities=27% Similarity=0.253 Sum_probs=33.6
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|++.-.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 6655689999999999999999999999999999874
No 225
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.12 E-value=0.014 Score=55.97 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999987655
No 226
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.08 E-value=0.014 Score=57.69 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999887643
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.08 E-value=0.016 Score=55.90 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
.-+++|||+|..|+-+|..|++.|.+|+++|+++.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 357999999999999999999999999999998876543
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.07 E-value=0.015 Score=57.60 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+++.+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l 203 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc
Confidence 479999999999999999999999999999988754
No 229
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.04 E-value=0.018 Score=53.57 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 230
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.98 E-value=0.017 Score=57.49 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 220 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc
Confidence 4799999999999999999999999999999987765
No 231
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.74 E-value=0.023 Score=44.16 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCC-CeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSG-KKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~ 36 (441)
..|+|+|+|..|..++..|.+.| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 999999985
No 232
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.71 E-value=0.021 Score=56.43 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+++.+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 479999999999999999999999999999988754
No 233
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.69 E-value=0.092 Score=46.56 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+ +|||+|||||++|+.+|..|++.|.+|+++|++.
T Consensus 1 M~-~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 1 MA-AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp -C-CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CC-CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 54 6999999999999999999999999999999973
No 234
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.61 E-value=0.025 Score=55.09 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 5799999999999999999999999999999887654
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.47 E-value=0.025 Score=53.79 Aligned_cols=36 Identities=31% Similarity=0.366 Sum_probs=31.1
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
||+...|.|||+|..|...|..|+++|++|++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 555668999999999999999999999999999985
No 236
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.39 E-value=0.027 Score=55.82 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 379999999999999999999999999999987654
No 237
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.33 E-value=0.021 Score=55.50 Aligned_cols=39 Identities=21% Similarity=0.349 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCCCCc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYYGGE 42 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~GG~ 42 (441)
.+||||||||++|+++|+.|+++ |++|+|||+++..+|.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 48999999999999999999999 9999999998766554
No 238
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.21 E-value=0.027 Score=47.96 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHhhhccC-CCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVS-GKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~-G~~V~vlE~~~ 37 (441)
.|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 699999999999999999999 99999999864
No 239
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.17 E-value=0.032 Score=55.73 Aligned_cols=37 Identities=24% Similarity=0.247 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 4799999999999999999999999999999887644
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.12 E-value=0.03 Score=45.20 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
-.|+|+|+|..|...|..|.+.|++|++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999975
No 241
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.10 E-value=0.04 Score=51.08 Aligned_cols=35 Identities=11% Similarity=-0.032 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
...|.|||.|.-|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999764
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.06 E-value=0.037 Score=54.97 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999887654
No 243
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.06 E-value=0.029 Score=55.89 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999887543
No 244
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.05 E-value=0.042 Score=51.02 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999863
No 245
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.04 E-value=0.039 Score=55.09 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 47999999999999999999999999999999887543
No 246
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.03 E-value=0.033 Score=52.04 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|.|||+|.-|...|..++++|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999764
No 247
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.99 E-value=0.041 Score=53.96 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 186 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE 186 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 4799999999999999999999999999999877643
No 248
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.98 E-value=0.037 Score=54.82 Aligned_cols=37 Identities=16% Similarity=0.037 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999887643
No 249
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.86 E-value=0.046 Score=50.59 Aligned_cols=35 Identities=29% Similarity=0.234 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 47999999999999999999999999999997765
No 250
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.84 E-value=0.041 Score=53.50 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 4799999999999999999999999999999887643
No 251
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.69 E-value=0.047 Score=54.65 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 3699999999999999999999999999999887643
No 252
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.67 E-value=0.04 Score=52.37 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 799999999999999999999999999998653
No 253
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.65 E-value=0.05 Score=53.56 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999998876543
No 254
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.63 E-value=0.047 Score=51.14 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=33.5
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
|.....|.|||+|..|...|..|+++|+ +|+++|++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 6666689999999999999999999998 999999875
No 255
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.62 E-value=0.046 Score=54.41 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 479999999999999999999999999999988754
No 256
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.59 E-value=0.051 Score=50.95 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|.+.|..|+++|++|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999975
No 257
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.57 E-value=0.052 Score=50.22 Aligned_cols=35 Identities=14% Similarity=-0.013 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 36999999999999999999999999999998876
No 258
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.57 E-value=0.039 Score=48.52 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|+|||+|..|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999999999999999854
No 259
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.54 E-value=0.032 Score=55.36 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999887643
No 260
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.49 E-value=0.043 Score=53.88 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.++|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 3799999999999999999999999999999887643
No 261
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.49 E-value=0.058 Score=54.55 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999875
No 262
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.48 E-value=0.06 Score=50.35 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 47999999999999999999999999999998765
No 263
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.47 E-value=0.062 Score=50.15 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 46999999999999999999999999999998765
No 264
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.35 E-value=0.065 Score=50.31 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 47999999999999999999999999999998766
No 265
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.33 E-value=0.066 Score=50.14 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 4799999999999999999999999999998654
No 266
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.33 E-value=0.054 Score=50.59 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|-.|.+.|..|+++|++|+++.|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999875
No 267
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.32 E-value=0.06 Score=53.06 Aligned_cols=37 Identities=19% Similarity=0.112 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4799999999999999999999999999999876543
No 268
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.31 E-value=0.067 Score=50.20 Aligned_cols=37 Identities=16% Similarity=0.335 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
|.....|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 6555689999999999999999999998 999999864
No 269
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.28 E-value=0.067 Score=49.66 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999987653
No 270
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.21 E-value=0.063 Score=54.36 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 47999999999999999999999999999998753
No 271
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.20 E-value=0.06 Score=53.33 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999887643
No 272
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.15 E-value=0.059 Score=50.49 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 273
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.08 E-value=0.065 Score=52.12 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 4799999999999999999999999999999887644
No 274
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.07 E-value=0.062 Score=53.03 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||.|.+|+++|..|++.|++|++.|+++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 469999999999999999999999999999976
No 275
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.07 E-value=0.073 Score=51.58 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh
Confidence 46999999999999999999999999999998876543
No 276
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.07 E-value=0.059 Score=53.53 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|.|||+|..|+..|..|+++|++|++++++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999999999999999999999999986
No 277
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.03 E-value=0.17 Score=50.58 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHhhhccC---CCeEEEEcCCCCCCCcccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS---GKKVLHIDRNKYYGGESAS 45 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~---G~~V~vlE~~~~~GG~~~t 45 (441)
+|||||||||++|++||.+|++. |++|+|+|+++ +||.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~ 45 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVL 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccC
Confidence 48999999999999999999999 99999999998 8987643
No 278
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.03 E-value=0.07 Score=52.47 Aligned_cols=35 Identities=14% Similarity=0.010 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCe-EEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKK-VLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~-V~vlE~~~~~ 39 (441)
-+|+|||+|.+|+=+|..|++.|.+ |+++++++..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998754
No 279
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.03 E-value=0.06 Score=53.31 Aligned_cols=34 Identities=26% Similarity=0.197 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHhhhccC-CC-eEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVS-GK-KVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~-G~-~V~vlE~~~~ 38 (441)
..|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999875
No 280
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.00 E-value=0.06 Score=53.30 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|.+|+=+|..|++.|.+|+++++++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 46999999999999999999999999999998764
No 281
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.96 E-value=0.088 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
-.|+|||+|..|...|..|++.|.+|++++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46899999999999999999999999999985
No 282
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.93 E-value=0.072 Score=48.85 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 489999999999999999999999999998753
No 283
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.88 E-value=0.08 Score=49.24 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 46999999999999999999999999999987755
No 284
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.87 E-value=0.073 Score=50.72 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=31.7
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|++...|.|||.|.-|...|..|+++|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4455689999999999999999999999999999864
No 285
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.87 E-value=0.074 Score=50.16 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=31.0
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
|+ ...|.|||+|..|...|..|+++|++|++++++
T Consensus 1 M~-~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MS-LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -C-CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CC-CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 44 347999999999999999999999999999984
No 286
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.84 E-value=0.074 Score=52.21 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
...+.|||.|..|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999999999999999754
No 287
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.80 E-value=0.06 Score=52.93 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
..|.|||.|.+|+++|..|+++|++|++.|.+...-
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 469999999999999999999999999999987653
No 288
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.78 E-value=0.068 Score=52.22 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
+..+.|||.|..||..|..||++|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3579999999999999999999999999999763
No 289
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.76 E-value=0.076 Score=52.31 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999874
No 290
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.69 E-value=0.075 Score=53.94 Aligned_cols=37 Identities=19% Similarity=0.103 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 3799999999999999999999999999999886543
No 291
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.64 E-value=0.11 Score=45.91 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
...|+|||||-.|...|..|.++|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999874
No 292
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.63 E-value=0.089 Score=45.94 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
..|.|||+|..|...|..|+++|++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998765
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.60 E-value=0.065 Score=54.28 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999875
No 294
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.58 E-value=0.068 Score=53.29 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 4689999999999999999999999999999887644
No 295
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.58 E-value=0.082 Score=49.06 Aligned_cols=33 Identities=27% Similarity=0.302 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999863
No 296
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=92.57 E-value=0.25 Score=41.52 Aligned_cols=56 Identities=13% Similarity=0.114 Sum_probs=44.5
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCCcc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYVQD 289 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~~~ 289 (441)
..+.+.+.+.++..|++++++ +|++|..+++. +.|++++.++.||.||.+.+..|.
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~~~g~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVETEEGVEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEECSSCEEEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEECCCEEEECEEEECCCCCCC
Confidence 467778888888999999999 99999876554 456653338999999999998763
No 297
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.55 E-value=0.054 Score=49.39 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
...|+|||+|-.|+..|..|.++|.+|+|++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3569999999999999999999999999999754
No 298
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.54 E-value=0.084 Score=52.24 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++-.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 209 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI 209 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC
Confidence 4699999999999999999999999999999887654
No 299
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.53 E-value=0.099 Score=48.79 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 46999999999999999999999999999987654
No 300
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.52 E-value=0.084 Score=52.39 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 469999999999999999999999999999987654
No 301
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.48 E-value=0.33 Score=47.92 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=40.1
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+..+||||||||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 778899999999999999999999999999999998 7888764
No 302
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=92.43 E-value=0.24 Score=49.52 Aligned_cols=35 Identities=11% Similarity=0.223 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHhhhcc---CCCeEEEEcCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSV---SGKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~---~G~~V~vlE~~~~ 38 (441)
.+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999999 9999999999864
No 303
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.36 E-value=0.091 Score=51.74 Aligned_cols=37 Identities=16% Similarity=0.033 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 4699999999999999999999999999999887643
No 304
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.34 E-value=0.21 Score=49.75 Aligned_cols=42 Identities=26% Similarity=0.334 Sum_probs=38.1
Q ss_pred CcccEEEECCChhHHHHHhhhcc-CCCeEEEEc--------CCCCCCCccc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSV-SGKKVLHID--------RNKYYGGESA 44 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 44 (441)
.+|||+|||||++|++||.+|++ .|++|+|+| +.+.+||.+.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~ 52 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCV 52 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcccc
Confidence 46999999999999999999999 999999999 4678899764
No 305
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.33 E-value=0.21 Score=49.25 Aligned_cols=43 Identities=30% Similarity=0.474 Sum_probs=37.9
Q ss_pred CCC-cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDE-EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~-~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+. +|||+|||||++|++||..|+++|++|+|+|+ +.+||.+.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 543 69999999999999999999999999999999 78998764
No 306
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.32 E-value=0.095 Score=48.43 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=31.3
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+....|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6666789999999999999999999999999999863
No 307
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.28 E-value=0.079 Score=50.59 Aligned_cols=31 Identities=29% Similarity=0.322 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
.|.|||+|.-|...|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999986
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.27 E-value=0.088 Score=52.02 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|||+|+|-.|...|..|+..|++|+|+|++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999864
No 309
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.20 E-value=0.23 Score=49.24 Aligned_cols=40 Identities=23% Similarity=0.411 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
+|||+|||||++|++||..|+++|++|+|+|+ +.+||.+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 65 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCV 65 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCcee
Confidence 69999999999999999999999999999999 78888764
No 310
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.17 E-value=0.11 Score=49.37 Aligned_cols=32 Identities=25% Similarity=0.237 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999999999999999999999999986
No 311
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.15 E-value=0.24 Score=49.35 Aligned_cols=44 Identities=25% Similarity=0.358 Sum_probs=39.7
Q ss_pred CCCcccEEEECCChhHHHHHhhhcc-CCCeEEEEc--------CCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSV-SGKKVLHID--------RNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 44 (441)
|+.+|||||||||++|++||.+|++ .|++|+|+| +.+.+||.+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 6667999999999999999999999 999999999 4678899764
No 312
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.12 E-value=0.31 Score=48.58 Aligned_cols=40 Identities=13% Similarity=0.224 Sum_probs=35.8
Q ss_pred CCCcccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYYG 40 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~G 40 (441)
|+..+||||||||++|++||..|+++ |.+|+|+|+++..+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 45679999999999999999999877 89999999998765
No 313
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.10 E-value=0.092 Score=52.03 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=32.1
Q ss_pred CCCcccEEEECCChhHHHHHhhhccC--CCeEEEEcCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRN 36 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~ 36 (441)
|.+...|.|||+|..|+..|..|+++ |++|++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 55445799999999999999999999 8999999986
No 314
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.04 E-value=0.079 Score=52.25 Aligned_cols=35 Identities=17% Similarity=0.026 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~ 38 (441)
...|+|||+|.+|+-+|..|++. |.+|+++++++.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 35799999999999999999998 999999998764
No 315
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.02 E-value=0.12 Score=48.13 Aligned_cols=34 Identities=26% Similarity=0.195 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
..|.|||.|.-|...|..|+++|++|++++++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 316
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.99 E-value=0.094 Score=53.69 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 317
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=91.94 E-value=0.32 Score=49.72 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC-CCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK-YYG 40 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~-~~G 40 (441)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 35999999999999999999999999999999984 454
No 318
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.94 E-value=0.11 Score=49.90 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999875
No 319
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.87 E-value=0.37 Score=45.10 Aligned_cols=56 Identities=11% Similarity=0.005 Sum_probs=45.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEeCCEEEEEEeCCeEEEcCEEEECCCCC
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIENGKVVGVRSGTEIARCKQVYCDPSYV 287 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~~~g~~~~a~~vI~~~~~~ 287 (441)
..+.+.+.+.++.+|.+++++++|++|..+++.+.+|.+++.++.+|+||.+++.+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCC
Confidence 46677777778889999999999999998877654477755589999999988854
No 320
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.85 E-value=0.1 Score=51.22 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
.|.|||+|..|+..|..|+++|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999986
No 321
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.80 E-value=0.079 Score=48.95 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|-.|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999873
No 322
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.78 E-value=0.31 Score=49.24 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHhhhcc---CCCeEEEEcCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSV---SGKKVLHIDRNKY 38 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~---~G~~V~vlE~~~~ 38 (441)
..+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 9999999999754
No 323
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.72 E-value=0.12 Score=51.26 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.-.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 324
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.70 E-value=0.14 Score=47.84 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
.-.|.|||+|..|...|..|+++|+ +|+++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999986
No 325
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.68 E-value=0.12 Score=48.29 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
..|+|||+|..|...|..|+++|+ +|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 369999999999999999999999 999999864
No 326
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.51 E-value=0.13 Score=48.11 Aligned_cols=31 Identities=29% Similarity=0.627 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|.|||+|..|...|..|+++|++|+++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 46999999999999999999999999999 65
No 327
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.51 E-value=0.43 Score=47.26 Aligned_cols=39 Identities=8% Similarity=0.212 Sum_probs=34.6
Q ss_pred cccEEEECCChhHHHHHhhhccC--CCeEEEEcCCCCCCCc
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVS--GKKVLHIDRNKYYGGE 42 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~~~GG~ 42 (441)
.+||||||||++|++||..|++. |.+|+|+|+++..|+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~ 76 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA 76 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC
Confidence 36999999999999999999986 9999999999887643
No 328
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.46 E-value=0.14 Score=52.24 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 47999999999999999999999999999998876543
No 329
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.44 E-value=0.1 Score=52.39 Aligned_cols=36 Identities=14% Similarity=-0.022 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 40 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (441)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999987764
No 330
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.41 E-value=0.13 Score=50.51 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
-.|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3599999999999999999999999999999765
No 331
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.41 E-value=0.14 Score=50.68 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999864
No 332
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.39 E-value=0.14 Score=48.20 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
+..|.|||+|.-|...|..|+++|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 357999999999999999999999999999985
No 333
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.36 E-value=0.14 Score=48.15 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999874
No 334
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.16 E-value=0.081 Score=46.60 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEE-EcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLH-IDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~v-lE~~~ 37 (441)
..|.|||+|.-|...|..|+++|++|++ .+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999998 88754
No 335
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.15 E-value=0.37 Score=48.39 Aligned_cols=44 Identities=34% Similarity=0.508 Sum_probs=40.4
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+.++||||||||++|++||.+|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 44569999999999999999999999999999999998999864
No 336
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.12 E-value=0.16 Score=46.74 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+ +|++|+++|++.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 47899999999999999999 999999999864
No 337
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.09 E-value=0.17 Score=47.10 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 338
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.06 E-value=0.12 Score=50.33 Aligned_cols=33 Identities=30% Similarity=0.314 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
...-|||.|..|+..|..|+++|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999999999999999999999999874
No 339
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.06 E-value=0.15 Score=47.09 Aligned_cols=37 Identities=24% Similarity=0.220 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
..|+|||+|..|+-+|..|++.|.+|+++++++.+..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4799999999999999999999999999999887654
No 340
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.01 E-value=0.12 Score=49.25 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 341
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.01 E-value=0.17 Score=46.97 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|-.|.+.|..|+ +|++|+++.|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 999999999864
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.94 E-value=0.17 Score=49.24 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|+..|..|++ |++|++++++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 379999999999999999998 99999999863
No 343
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.92 E-value=0.17 Score=50.26 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 369999999999999999999999999999864
No 344
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.87 E-value=0.18 Score=46.45 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999987754
No 345
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.86 E-value=0.17 Score=47.56 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+++|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999998 999999874
No 346
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.85 E-value=0.15 Score=44.66 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+....|+|.|| |..|...+..|.++|++|.++.|+.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 555567999995 9999999999999999999999864
No 347
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.78 E-value=0.16 Score=50.12 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~ 39 (441)
-+|+|||+|.+|+=+|..+.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 369999999999999999999996 69999998764
No 348
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=90.78 E-value=0.18 Score=50.60 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
-.++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999985
No 349
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.75 E-value=0.16 Score=46.63 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999998753
No 350
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.71 E-value=0.12 Score=47.98 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHhhhccC-----C-CeEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVS-----G-KKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~-----G-~~V~vlE~~ 36 (441)
.|.|||+|..|...|..|+++ | ++|+++++.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 799999999999999999999 9 999999873
No 351
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.71 E-value=0.2 Score=46.44 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF 189 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC
Confidence 46999999999999999999999999999998776
No 352
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.70 E-value=0.19 Score=45.74 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|.|+|..|...+..|.++|++|+++.|+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999998854
No 353
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.70 E-value=0.17 Score=48.94 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 48999999999999999999 99999999863
No 354
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.67 E-value=0.13 Score=45.62 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.++|+|+|..|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999864
No 355
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.66 E-value=0.21 Score=46.31 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 356
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.64 E-value=0.2 Score=43.56 Aligned_cols=31 Identities=26% Similarity=0.234 Sum_probs=29.0
Q ss_pred cEEEEC-CChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 6 DAIVLG-TGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIG-aG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
.|.||| +|..|...|..|+++|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999985
No 357
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.61 E-value=0.18 Score=46.84 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
.|+|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999864
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.55 E-value=0.18 Score=48.98 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|||||.|-.|...|..|.+.|++|+++|++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999874
No 359
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.54 E-value=0.2 Score=43.86 Aligned_cols=32 Identities=34% Similarity=0.230 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|.|||+|..|...|..|+++|++|.+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 360
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.53 E-value=0.21 Score=46.91 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHH-HHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECI-LSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~-aA~~La~~G~~V~vlE~~~~ 38 (441)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46899999999996 78889999999999998764
No 361
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.52 E-value=0.21 Score=45.45 Aligned_cols=33 Identities=12% Similarity=-0.057 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998765
No 362
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.51 E-value=0.19 Score=46.50 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 363
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.45 E-value=0.16 Score=50.29 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHhhhccC-CCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVS-GKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~-G~~V~vlE~~~~~GG 41 (441)
-+++|||+|..|+-+|..|++. |.+|+++|+.+.+..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 4799999999999999999999 999999999876543
No 364
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.40 E-value=0.21 Score=44.73 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+++|++|++.+++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 478999999999999999999999999999864
No 365
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.32 E-value=0.64 Score=43.83 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=39.9
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCccc
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESA 44 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (441)
|+..+||+|||||++|++||.+|+++|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 45579999999999999999999999999999999999999874
No 366
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.31 E-value=0.19 Score=46.97 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCcccEEEECCChhHHHHHhhhccCC----CeEEEEcCCC
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSVSG----KKVLHIDRNK 37 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~~G----~~V~vlE~~~ 37 (441)
++...|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 33457999999999999999999999 8999999875
No 367
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.11 E-value=0.16 Score=47.54 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDR 35 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~ 35 (441)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 368
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.01 E-value=0.24 Score=46.32 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999873
No 369
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.97 E-value=0.18 Score=45.31 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
..|+|||+|-.|..+|.+|+++|. +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 479999999999999999999996 899999753
No 370
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.96 E-value=0.16 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.200 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|.|||.|.-|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999998753
No 371
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.89 E-value=0.25 Score=45.01 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|.|+|..|...+..|.++|++|+++.|+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 469999999999999999999999999999864
No 372
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.86 E-value=0.25 Score=46.17 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
...|+|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999997 899999864
No 373
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.82 E-value=0.23 Score=45.47 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=30.0
Q ss_pred cEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+ |..|...|..|+++|++|++++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999 9999999999999999999999863
No 374
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=89.76 E-value=0.25 Score=49.01 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 368999999999999999999999999999853
No 375
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.73 E-value=0.25 Score=45.59 Aligned_cols=32 Identities=22% Similarity=0.408 Sum_probs=30.2
Q ss_pred cEEEEC-CChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLG-TGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIG-aG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.||| +|.-|.+.|..|+++|++|.+++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 699999 99999999999999999999999865
No 376
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=89.62 E-value=0.72 Score=47.22 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.0
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCC-CCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK-YYGG 41 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~-~~GG 41 (441)
..|||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 46999999999999999999999999999999975 4554
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.57 E-value=0.25 Score=45.66 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999863
No 378
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.56 E-value=0.26 Score=44.89 Aligned_cols=32 Identities=16% Similarity=0.045 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|+|+|-.|..+|..|++.|.+|+++.|+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999875
No 379
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=89.49 E-value=0.63 Score=46.81 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=34.9
Q ss_pred CCcccEEEECCChhHHHHHhhhcc---CCCeEEEEcCCCCCC
Q psy2620 2 DEEYDAIVLGTGLKECILSGMLSV---SGKKVLHIDRNKYYG 40 (441)
Q Consensus 2 ~~~~DVvIIGaG~~Gl~aA~~La~---~G~~V~vlE~~~~~G 40 (441)
+..+||||||||++|+++|+.|++ +|++|+|+|+.+...
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~ 44 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR 44 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC
Confidence 456899999999999999999999 999999999976543
No 380
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.41 E-value=0.23 Score=47.98 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999999999999999999999999864
No 381
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.41 E-value=0.23 Score=47.39 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
+..|||+|+|.+|..+|..|...|. +|.++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999997 999999985
No 382
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.33 E-value=0.21 Score=49.55 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHhhhccC--CCeEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVS--GKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~ 36 (441)
.|.|||+|..|+..|..|+++ |++|++++++
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 699999999999999999998 7999999975
No 383
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=89.32 E-value=0.27 Score=48.47 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=33.7
Q ss_pred cCcEEEcccceeEEEEeC-C-EEEEEEe----------------CC--eEEEcCEEEECCCCCcc
Q psy2620 245 YGGTYMLDKPVDEIVIEN-G-KVVGVRS----------------GT--EIARCKQVYCDPSYVQD 289 (441)
Q Consensus 245 ~G~~i~~~~~V~~i~~~~-~-~~~~v~~----------------~g--~~~~a~~vI~~~~~~~~ 289 (441)
.|.++++++.+.+|..++ + ++.+|++ +| +++.||.||.+.++-|.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 678899999999987543 4 5555543 24 57999999999988664
No 384
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=89.31 E-value=0.78 Score=43.64 Aligned_cols=38 Identities=18% Similarity=0.113 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
.+||+|||||++||++|..|+++|++|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 58999999999999999999999999999999887764
No 385
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.29 E-value=0.27 Score=45.69 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHhhhccC--CCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVS--GKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~--G~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++ |++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 79999999874
No 386
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.04 E-value=0.29 Score=48.50 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
+.+|.|||+|.-|...|..|+++|++|++++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999986
No 387
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.00 E-value=0.32 Score=45.23 Aligned_cols=33 Identities=12% Similarity=0.223 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999997 999999864
No 388
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.00 E-value=0.3 Score=45.40 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=28.6
Q ss_pred ccEEEECCC-hhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTG-LKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG-~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||+| +.|..+|.+|...|.+|++++++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 479999999 67999999999999999998764
No 389
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.95 E-value=0.28 Score=47.13 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|+|+|..|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 390
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.95 E-value=0.26 Score=46.05 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHhhhccCC-CeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSG-KKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 36999999999999999999999 9999999875
No 391
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.94 E-value=0.33 Score=45.40 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
...|.|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3579999999999999999999999 999999865
No 392
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.93 E-value=0.28 Score=46.68 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|+|+|..|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 393
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.84 E-value=0.25 Score=46.03 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
..|.|||.|.-|...|..|+++|+ +|++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 479999999999999999999999 99999996
No 394
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.78 E-value=0.18 Score=47.69 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHhhhccCC-------CeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSG-------KKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G-------~~V~vlE~~~~ 38 (441)
..|.|||+|.-|...|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 37999999999999999999999 99999998765
No 395
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=88.77 E-value=0.92 Score=45.43 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHhhhcc------------CCCeEEEEcCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSV------------SGKKVLHIDRNKYY 39 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~------------~G~~V~vlE~~~~~ 39 (441)
..+||||||||++|+++|..|++ +|++|+|+|+.+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 36899999999999999999999 99999999997653
No 396
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.73 E-value=0.3 Score=46.69 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999999999999999999999999864
No 397
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.56 E-value=0.28 Score=46.68 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
+..|+|+|+|-+|..+|..|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4689999999999999999999997 89999997
No 398
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.46 E-value=0.24 Score=47.85 Aligned_cols=29 Identities=28% Similarity=0.353 Sum_probs=27.5
Q ss_pred cEEEECCChhHHHHHhhhcc-CCCeEEEEc
Q psy2620 6 DAIVLGTGLKECILSGMLSV-SGKKVLHID 34 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~-~G~~V~vlE 34 (441)
.|.|||+|..|...|..|++ +|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 69999999999999999998 599999998
No 399
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.45 E-value=0.38 Score=41.06 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+. ..|+|+|+ |..|...+..|.++|++|+++.|+.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 543 46999998 9999999999999999999999864
No 400
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.42 E-value=0.28 Score=51.43 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=32.4
Q ss_pred ccEEEEC--CChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLG--TGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIG--aG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 3799999 99999999999999999999999988 543
No 401
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.34 E-value=0.22 Score=53.98 Aligned_cols=37 Identities=22% Similarity=0.095 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGG 41 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (441)
-.|+|||+|..|+-+|..|++.|.+|+|+|+++.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 3699999999999999999999999999999987653
No 402
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.32 E-value=0.31 Score=50.92 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999874
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.19 E-value=0.36 Score=43.94 Aligned_cols=32 Identities=28% Similarity=0.430 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999863
No 404
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.17 E-value=0.39 Score=43.54 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|||+|-.|.++|..|++.|.+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 368999999999999999999999999998864
No 405
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.13 E-value=0.35 Score=44.40 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999999864
No 406
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.12 E-value=0.31 Score=45.00 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=27.3
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|-+||-|.-|...|..|+++|++|++++++.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999999999999865
No 407
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.91 E-value=0.35 Score=45.08 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=30.1
Q ss_pred CcccEEEECCChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
....|+|||+|..|...|..|+..|. .|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999884 89999975
No 408
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.91 E-value=0.32 Score=43.80 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHhhhccCC-CeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSG-KKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999863
No 409
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.90 E-value=0.37 Score=45.08 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
...|.|||+|..|.++|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999997 89999974
No 410
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.87 E-value=0.3 Score=45.59 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 48999999999999999999999 999999863
No 411
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.86 E-value=0.41 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|+|.|| |..|...+..|+++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 3899995 9999999999999999999999863
No 412
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.80 E-value=0.3 Score=44.51 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|+|+|-.|..+|..|++.|.+|+|+.|+
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999885
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.78 E-value=0.36 Score=44.39 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++|++|.+++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 414
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.76 E-value=0.36 Score=43.42 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHhhhccCC----CeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSG----KKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G----~~V~vlE~~~~ 38 (441)
..|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998764
No 415
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.73 E-value=0.36 Score=47.57 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 46999999999999999999999999999975
No 416
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.67 E-value=0.19 Score=44.44 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|.|||+|..|.+.|..|+++|++|+.+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999875
No 417
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.60 E-value=0.48 Score=44.26 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
...|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999998 999999865
No 418
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=87.59 E-value=0.45 Score=43.69 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=31.6
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+....|+|+|| |..|...+..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 543456999997 9999999999999999999999865
No 419
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.51 E-value=0.48 Score=42.51 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999863
No 420
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.44 E-value=0.44 Score=47.15 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..+|.|||.|.-|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999874
No 421
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=87.42 E-value=1.2 Score=43.87 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=36.2
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
.+|||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~ 41 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGK 41 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCC
Confidence 4799999999999999999999999999999999854444
No 422
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.39 E-value=0.35 Score=44.90 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHhhhccCC--CeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSG--KKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G--~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 5999999999999999999999 7999999863
No 423
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.35 E-value=0.45 Score=47.13 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999986
No 424
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.33 E-value=0.36 Score=52.70 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHhhhccCCC-eEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK-KVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~~ 38 (441)
.|+|||||..|+=+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999995 9999999873
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.30 E-value=0.43 Score=44.43 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+++|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 469999999999999999999999 999999875
No 426
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.26 E-value=0.28 Score=46.92 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHhhhccCC-------CeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSG-------KKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G-------~~V~vlE~~~~ 38 (441)
.|.|||+|.-|...|..|+++| ++|++++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998764
No 427
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.26 E-value=0.47 Score=43.78 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
..|+|||+|-.|..+|..|++.|. +|+|+.|+
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 99999886
No 428
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.15 E-value=0.42 Score=45.74 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 429
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.09 E-value=0.45 Score=43.38 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999864
No 430
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.08 E-value=0.43 Score=44.95 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|.|||.|.-|.+.|..|+++|++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999999999999999999999874
No 431
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.03 E-value=0.47 Score=41.24 Aligned_cols=31 Identities=26% Similarity=0.376 Sum_probs=28.8
Q ss_pred cEEEECC-ChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 6 DAIVLGT-GLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
.|+|.|| |..|...+..|+++|++|.++.|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 3899998 999999999999999999999885
No 432
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.00 E-value=0.49 Score=43.36 Aligned_cols=31 Identities=13% Similarity=0.245 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..++|+|+|-.|..+|..|++.| +|++..|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999875
No 433
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.98 E-value=0.45 Score=43.90 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=31.5
Q ss_pred cccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 4 EYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
...|+|.|| |..|...+..|.++|++|+++.|+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 357999999 99999999999999999999998654
No 434
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.94 E-value=0.48 Score=47.15 Aligned_cols=33 Identities=18% Similarity=0.059 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 435
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.93 E-value=0.47 Score=43.19 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999998 999999864
No 436
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.87 E-value=0.45 Score=41.87 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.1
Q ss_pred ccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|.|| |..|..++..|+++|++|+++.|+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 46899998 9999999999999999999999864
No 437
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.77 E-value=0.45 Score=47.19 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999863
No 438
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=86.66 E-value=0.52 Score=43.35 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=31.6
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
|+....|+|+|| |..|...+..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 554457999996 9999999999999999999999875
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.65 E-value=0.49 Score=44.91 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|+|||||..|.-+|..+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 589999999999999999999999999998653
No 440
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.65 E-value=0.45 Score=47.16 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999999999986
No 441
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.64 E-value=0.44 Score=44.44 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 1 MDEEYDAIVLGTGLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 1 m~~~~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
|.+...|.|||+|..|.+.|..|+..+. .+.++|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 5556789999999999999999998886 89999974
No 442
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.63 E-value=0.41 Score=44.84 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=31.9
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCC-------eEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGK-------KVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~-------~V~vlE~~~ 37 (441)
|.+...|+|+|| |..|...+..|.+.|+ +|.++|+..
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 665668999997 9999999999999996 899999753
No 443
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.58 E-value=0.59 Score=40.65 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=28.8
Q ss_pred cEEEECC-ChhHHHHHhhhc-cCCCeEEEEcCCC
Q psy2620 6 DAIVLGT-GLKECILSGMLS-VSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La-~~G~~V~vlE~~~ 37 (441)
.|+|.|| |..|..+|..|+ +.|++|+++.|+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999999863
No 444
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.37 E-value=0.45 Score=42.95 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCCe-EEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKK-VLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~-V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4699999999999999999999999 89998863
No 445
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.31 E-value=0.46 Score=49.45 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=33.5
Q ss_pred cEEEEC--CChhHHHHHhhhccCCCeEEEEcCCCCCCCc
Q psy2620 6 DAIVLG--TGLKECILSGMLSVSGKKVLHIDRNKYYGGE 42 (441)
Q Consensus 6 DVvIIG--aG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (441)
+|+||| +|..|+-+|..|++.|.+|+++++.+.+...
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~ 563 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW 563 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc
Confidence 599999 9999999999999999999999998876544
No 446
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.27 E-value=0.62 Score=43.44 Aligned_cols=38 Identities=21% Similarity=0.138 Sum_probs=32.5
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
|+..-.|+|.|| |..|...+..|+++|++|+++.++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 554557999995 99999999999999999999988653
No 447
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.26 E-value=0.61 Score=42.70 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=30.0
Q ss_pred cEEEECC-ChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 6 DAIVLGT-GLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
.|+|.|| |..|...+.+|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3899998 99999999999999999999988654
No 448
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.94 E-value=0.4 Score=50.10 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999864
No 449
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.83 E-value=0.64 Score=42.45 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHhhhccCCC---eEEEEcCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGK---KVLHIDRNK 37 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~---~V~vlE~~~ 37 (441)
...|.|||+|.-|...|..|+++|+ +|.+.+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999874
No 450
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.71 E-value=0.64 Score=40.33 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=29.3
Q ss_pred cEEEEC-CChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLG-TGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIG-aG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|+|.| +|..|...+..|+++|++|+++.|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 69999999999999999999999864
No 451
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.61 E-value=0.68 Score=45.59 Aligned_cols=33 Identities=21% Similarity=0.181 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999999999999999999999999864
No 452
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=85.41 E-value=0.61 Score=42.75 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=29.0
Q ss_pred ccEEEECCC-hhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTG-LKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG-~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||+| +.|..+|..|.+.|.+|+++.++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 579999999 68999999999999999999743
No 453
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.36 E-value=0.62 Score=42.97 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|..+|..|...|.+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 454
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.27 E-value=0.71 Score=41.15 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCC----eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK----KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~----~V~vlE~~~ 37 (441)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999863
No 455
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.26 E-value=0.6 Score=43.91 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|.+.|..|+++|++|++.+++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 58999999999999999999999999999875
No 456
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.09 E-value=0.53 Score=43.35 Aligned_cols=32 Identities=9% Similarity=0.015 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
.|.|||+|..|.+.|..|++.|+ +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 48999999999999999999998 999999854
No 457
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=84.99 E-value=0.7 Score=44.23 Aligned_cols=35 Identities=14% Similarity=0.041 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
...++|+|+|+.+...|..++.-|++|+|+|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 45799999999999999999999999999998764
No 458
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.95 E-value=0.56 Score=42.69 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||+|-.|...|..|++.|.+|++++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999986
No 459
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=84.86 E-value=0.58 Score=43.89 Aligned_cols=31 Identities=10% Similarity=-0.012 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.++|+|.|-.|...|..|.+.|+ |+++|+++
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 69999999999999999999999 99999865
No 460
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=84.83 E-value=0.78 Score=41.77 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=28.9
Q ss_pred ccEEEECCC-hhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTG-LKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG-~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
.+|+|||+| +.|..+|..|.+.|.+|+++.++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 579999999 57999999999999999999743
No 461
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=84.81 E-value=0.63 Score=41.92 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=24.5
Q ss_pred EEEECCChhH---HHHHhhhccCCCeEEEE
Q psy2620 7 AIVLGTGLKE---CILSGMLSVSGKKVLHI 33 (441)
Q Consensus 7 VvIIGaG~~G---l~aA~~La~~G~~V~vl 33 (441)
+|++|.|-|| +++|.+|+++|++|.|+
T Consensus 89 lVlcG~GNNGGDGlv~AR~L~~~G~~V~v~ 118 (259)
T 3d3k_A 89 ALLCGPHVKGAQGISCGRHLANHDVQVILF 118 (259)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 5788999995 99999999999999986
No 462
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=84.77 E-value=0.54 Score=47.35 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
..|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 4699999999999999999999999999998654
No 463
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.75 E-value=0.69 Score=42.50 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
..|.|||+|..|..+|..|...|.+|++++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999853
No 464
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=84.74 E-value=0.63 Score=47.12 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKY 38 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~ 38 (441)
-.++|||+|-.|...|..|.+.|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 3699999999999999999999999999999864
No 465
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.72 E-value=0.66 Score=48.46 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-.|.|||+|.-|.-.|..++++|++|+++|.++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 368999999999999999999999999999764
No 466
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=84.72 E-value=0.71 Score=45.40 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHhhhccC--------------------C-CeEEEEcCCCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVS--------------------G-KKVLHIDRNKYY 39 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~--------------------G-~~V~vlE~~~~~ 39 (441)
-.|+|||+|.+|+=+|..|++. | .+|+++++++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4699999999999999999874 6 599999987643
No 467
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=84.65 E-value=0.49 Score=43.32 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|+++|++|++++ +.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 69999999999999999999999999998 53
No 468
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.60 E-value=0.73 Score=41.31 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
..|+|||+|-.|..+|.+|+++|. +++++|..
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 579999999999999999999995 78888874
No 469
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=84.60 E-value=0.62 Score=41.62 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=25.0
Q ss_pred EEEECCChhH---HHHHhhhccCCCeEEEEc
Q psy2620 7 AIVLGTGLKE---CILSGMLSVSGKKVLHID 34 (441)
Q Consensus 7 VvIIGaG~~G---l~aA~~La~~G~~V~vlE 34 (441)
+|++|.|-|| +++|++|+++|++|.|+=
T Consensus 62 ~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 92 (246)
T 1jzt_A 62 FVIAGPGNNGGDGLVCARHLKLFGYNPVVFY 92 (246)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCeEEEEE
Confidence 5788999995 999999999999999973
No 470
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.56 E-value=0.74 Score=45.20 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|+|+|..|..+|..|++.|.+|++++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 46999999999999999999999999999875
No 471
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=84.51 E-value=0.65 Score=42.95 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=24.5
Q ss_pred EEEECCChhH---HHHHhhhccCCCeEEEE
Q psy2620 7 AIVLGTGLKE---CILSGMLSVSGKKVLHI 33 (441)
Q Consensus 7 VvIIGaG~~G---l~aA~~La~~G~~V~vl 33 (441)
+|++|.|-|| +++|.+|+++|++|.|+
T Consensus 136 lVlcG~GNNGGDGlv~AR~L~~~G~~V~V~ 165 (306)
T 3d3j_A 136 ALLCGPHVKGAQGISCGRHLANHDVQVILF 165 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 5778999995 99999999999999986
No 472
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.48 E-value=0.61 Score=42.81 Aligned_cols=32 Identities=25% Similarity=0.436 Sum_probs=29.0
Q ss_pred cccEEEECCChhHHHHHhhhccCC-CeEEEEcC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSG-KKVLHIDR 35 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~ 35 (441)
...|+|||+|-.|..+|.+|+++| -+++++|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 357999999999999999999999 58888886
No 473
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.43 E-value=0.61 Score=43.59 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
..|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 479999999999999999999997 899999743
No 474
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=84.37 E-value=2.7 Score=39.42 Aligned_cols=56 Identities=5% Similarity=0.075 Sum_probs=44.5
Q ss_pred chHHHHHHHHHHH-cCcEEEcccceeEEEEeC-----------------C--EEEEEEe-------CC--------eEEE
Q psy2620 232 GELPQSFARLSAI-YGGTYMLDKPVDEIVIEN-----------------G--KVVGVRS-------GT--------EIAR 276 (441)
Q Consensus 232 ~~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~-----------------~--~~~~v~~-------~g--------~~~~ 276 (441)
..+.+.|.+.+.. .|++++.++.|+++..++ + ++.||.. +| .+|+
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 5677888888887 499999999999998765 3 7888764 12 5799
Q ss_pred cCEEEECCCCC
Q psy2620 277 CKQVYCDPSYV 287 (441)
Q Consensus 277 a~~vI~~~~~~ 287 (441)
|+.||.+++.-
T Consensus 240 Ak~VV~ATG~~ 250 (344)
T 3jsk_A 240 APVIISTTGHD 250 (344)
T ss_dssp CSEEEECCCSS
T ss_pred cCEEEECCCCC
Confidence 99999988754
No 475
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=84.33 E-value=0.69 Score=41.75 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=25.0
Q ss_pred EEEECCChhH---HHHHhhhccCCCeEEEEc
Q psy2620 7 AIVLGTGLKE---CILSGMLSVSGKKVLHID 34 (441)
Q Consensus 7 VvIIGaG~~G---l~aA~~La~~G~~V~vlE 34 (441)
+|++|.|-|| +++|++|+++|++|.|+=
T Consensus 83 lVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~ 113 (265)
T 2o8n_A 83 LVICGPGNNGGDGLVCARHLKLFGYQPTIYY 113 (265)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCcEEEEE
Confidence 5788999995 999999999999999974
No 476
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.31 E-value=0.77 Score=43.22 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=29.1
Q ss_pred cccEEEECC-ChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 4 EYDAIVLGT-GLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGa-G~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
...|+|||+ |..|.++|+.|+..|. +|.++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999998 9999999999999984 89999974
No 477
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=84.28 E-value=0.66 Score=42.28 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~~ 37 (441)
..++|||+|-.|..+|..|++.|. +|+|+.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 899998864
No 478
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.19 E-value=0.66 Score=41.72 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDR 35 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~ 35 (441)
.|.|||+|.-|...|..|+++|++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999876
No 479
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=84.16 E-value=0.62 Score=43.07 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
..|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 479999999999999999999998 999999876
No 480
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=84.01 E-value=0.78 Score=41.36 Aligned_cols=32 Identities=28% Similarity=0.298 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.++|||+|-.|...|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999863
No 481
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=83.97 E-value=0.83 Score=41.86 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=28.6
Q ss_pred ccEEEECC-ChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGT-GLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||. |+.|..+|..|.+.|..|+++.++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57999996 568999999999999999999873
No 482
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.85 E-value=0.83 Score=42.81 Aligned_cols=33 Identities=27% Similarity=0.532 Sum_probs=29.1
Q ss_pred cccEEEECCChhHHHHHhhhccCC-CeEEEEcCC
Q psy2620 4 EYDAIVLGTGLKECILSGMLSVSG-KKVLHIDRN 36 (441)
Q Consensus 4 ~~DVvIIGaG~~Gl~aA~~La~~G-~~V~vlE~~ 36 (441)
...|+|||+|-.|+.+|.+|+++| .+++++|..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 357999999999999999999999 578888863
No 483
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.83 E-value=0.79 Score=43.53 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|+|.|-.|..+|..|.+.|.+|++.|++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999864
No 484
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=83.72 E-value=2.8 Score=38.99 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHc-CcEEEcccceeEEEEe---C-C--EEEEEEe
Q psy2620 232 GELPQSFARLSAIY-GGTYMLDKPVDEIVIE---N-G--KVVGVRS 270 (441)
Q Consensus 232 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~---~-~--~~~~v~~ 270 (441)
..+.+.|.+.+... |++++.+++|+++..+ + + ++.||.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 56778888888775 9999999999999886 3 5 8888864
No 485
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=83.70 E-value=0.86 Score=40.35 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=29.0
Q ss_pred cEEEECC-ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGT-GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa-G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
.|+|.|| |..|..+|..|+++|++|+++.|+.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 4889987 9999999999999999999999864
No 486
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=83.59 E-value=0.83 Score=45.44 Aligned_cols=57 Identities=5% Similarity=-0.046 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEcccceeEEEEe--CCEEEEEEe----CC--eEEEcCEEEECCCCCc
Q psy2620 232 GELPQSFARLSAIYGGTYMLDKPVDEIVIE--NGKVVGVRS----GT--EIARCKQVYCDPSYVQ 288 (441)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~~v~~----~g--~~~~a~~vI~~~~~~~ 288 (441)
..+.+.|.+.++..|++|+++++|++|..+ ++..+.|.+ +| .+++||.||.+.|..+
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 577888888888899999999999999863 244455655 45 5799999999888754
No 487
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=83.54 E-value=0.84 Score=40.97 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
.++|||+|-.|.+++..|++.|. +|.|+.|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 69999999999999999999997 89999885
No 488
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=83.52 E-value=0.84 Score=41.27 Aligned_cols=32 Identities=16% Similarity=0.025 Sum_probs=28.7
Q ss_pred ccEEEECCC-hhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLGTG-LKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG-~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..|+|||.| +.|..+|..|.+.|.+|+++.++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 579999976 79999999999999999999763
No 489
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.28 E-value=0.76 Score=42.72 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 6 DAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
.|.|||+|..|...|..|++.|. +|.++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 48999999999999999999987 899999865
No 490
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.25 E-value=0.99 Score=42.23 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
..|.|||+|..|.++|..|+.+|. ++.++|.+
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 579999999999999999999997 89999975
No 491
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=83.19 E-value=0.85 Score=42.43 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRNK 37 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~~ 37 (441)
..|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999998885 899999863
No 492
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.14 E-value=0.55 Score=44.87 Aligned_cols=39 Identities=21% Similarity=0.309 Sum_probs=33.9
Q ss_pred cccEEEECC-ChhHHHHHhhhccCCC---eEEEEcCCC-CCCCc
Q psy2620 4 EYDAIVLGT-GLKECILSGMLSVSGK---KVLHIDRNK-YYGGE 42 (441)
Q Consensus 4 ~~DVvIIGa-G~~Gl~aA~~La~~G~---~V~vlE~~~-~~GG~ 42 (441)
...|+|||+ |..|+.|+..+..-|. +|+++|.+. .-||.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 357999999 9999999999999997 999999976 44664
No 493
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=83.05 E-value=0.82 Score=41.78 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=30.7
Q ss_pred CCCcccEEEECC-ChhHHHHHhhhccCC-CeEEEEcCCC
Q psy2620 1 MDEEYDAIVLGT-GLKECILSGMLSVSG-KKVLHIDRNK 37 (441)
Q Consensus 1 m~~~~DVvIIGa-G~~Gl~aA~~La~~G-~~V~vlE~~~ 37 (441)
|+..-.|+|.|| |..|...+..|.++| ++|.++.|+.
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC
Confidence 443456999998 999999999999999 9999999864
No 494
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.99 E-value=0.91 Score=42.18 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
..|+|+|+|-.|.++|..|++.|. +|+|+.|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 468999999999999999999997 89999886
No 495
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.96 E-value=0.94 Score=41.41 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHhhhccCCC-eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK-KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~-~V~vlE~~ 36 (441)
..|+|+|+|-.|.++|..|++.|. +|+|+.|+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999997 79999875
No 496
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.94 E-value=0.9 Score=41.53 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=29.3
Q ss_pred ccEEEEC-CChhHHHHHhhhccCCCeEEEEcCC
Q psy2620 5 YDAIVLG-TGLKECILSGMLSVSGKKVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIG-aG~~Gl~aA~~La~~G~~V~vlE~~ 36 (441)
..++|+| +|-.|..+|..|++.|.+|+++.|+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4689999 8999999999999999999999885
No 497
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=82.94 E-value=0.9 Score=40.81 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=28.4
Q ss_pred cEEEECC---ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGT---GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa---G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-|+|.|| |-.|..+|..|+++|++|+++.++.
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 4888887 5889999999999999999999875
No 498
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=82.90 E-value=1.3 Score=44.58 Aligned_cols=37 Identities=38% Similarity=0.522 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHhhhccCCCeEEEEcCCCCC
Q psy2620 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYY 39 (441)
Q Consensus 3 ~~~DVvIIGaG~~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (441)
.+||+||||+|.+|+++|.+|+++|++|+|||++...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998754
No 499
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=82.76 E-value=0.77 Score=42.88 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHhhhccCCC--eEEEEcCC
Q psy2620 5 YDAIVLGTGLKECILSGMLSVSGK--KVLHIDRN 36 (441)
Q Consensus 5 ~DVvIIGaG~~Gl~aA~~La~~G~--~V~vlE~~ 36 (441)
..|.|||+|..|.++|..|+..|. ++.++|.+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999987 89999974
No 500
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=82.72 E-value=0.97 Score=40.73 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=28.1
Q ss_pred cEEEECC---ChhHHHHHhhhccCCCeEEEEcCCC
Q psy2620 6 DAIVLGT---GLKECILSGMLSVSGKKVLHIDRNK 37 (441)
Q Consensus 6 DVvIIGa---G~~Gl~aA~~La~~G~~V~vlE~~~ 37 (441)
-++|.|+ |-.|..+|..|+++|.+|+++.++.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 4889994 7889999999999999999998764
Done!