RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2623
(707 letters)
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 64.5 bits (156), Expect = 9e-11
Identities = 72/578 (12%), Positives = 157/578 (27%), Gaps = 172/578 (29%)
Query: 193 FET------YHNLVPLILHPVIPVSNREQNNIMNWLK--LSSECCRTEI----NSEEQIF 240
FET Y +++ + V N + ++ + K LS E I ++
Sbjct: 9 FETGEHQYQYKDILSVFEDAF--VDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTL 65
Query: 241 -----------SVISAF--DIPQFDY------------DPDLKKFKLVDKKRKLCADSDA 275
++ F ++ + +Y P + ++++ +L D+
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 276 KSKLFRERYNIIRQRTLRHSLFNNINPNADSVKLDWVEYLMSLTNVNHKTVVLGM----- 330
+K R + LR +L + P V ++ G+
Sbjct: 126 FAKYNVSRLQPYLK--LRQALLE-LRPA------KNV-------------LIDGVLGSGK 163
Query: 331 ----ISQLKENRYFLEDPTGIVQLDLSQTSYHPGLYTENCIVLVEGHYKDQILHVDALGF 386
+ + + I L+L N V + + +D
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKN---------CNSPETVLEMLQKLLYQIDPNWT 214
Query: 387 PPPEASKNSRLYFGNQNIWGGPSPVSLKSVNRMTKMEKNNENAMIVILSDVHLDNDKVR- 445
+ S N +L S+++ R K EN ++ +L +V +
Sbjct: 215 SRSDHSSNIKL-----------RIHSIQAELRRLLKSKPYENCLL-VLLNVQ-NAKAWNA 261
Query: 446 -NNLCE-FITSEFQGFVPNSTMATNPCRVQYCSQEILVVREELLSKMCRNCIKFPEEGDI 503
N C+ +T+ F+ V + A + + + +E+ S + + + D+
Sbjct: 262 FNLSCKILLTTRFKQ-VTDFLSAATTTHISLDHHSMTLTPDEVKS-LLLKYLDCRPQ-DL 318
Query: 504 SKHVSKNNGEKDIIFLIVPKIYVEGTVTSKVLSPALPKFITSEFQGFVPNSTMATNPCRV 563
+ V N P I +
Sbjct: 319 PREVLTTN-------------------------PRRLSIIAESIRDG---------LATW 344
Query: 564 QYCSQEILVVREELLSKMCRNCIKFPEEGDISKHFVRTLVSQGTLVSLPLNLCPVYWSQ- 622
V + L+ + + + E + K F R V + +P L + W
Sbjct: 345 DNWKH----VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS-AHIPTILLSLIWFDV 399
Query: 623 --------------YGALSLYPLPDLVILGDQLNAYTIQNTDCIFINPVFHNTVRNAFEV 668
Y + P + + ++ + H ++ + + +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN----EYALHRSIVDHYNI 455
Query: 669 EKEHHAVSSGVWLIQSSFKPEVI--YVGELITWLLGHH 704
K P + Y +GHH
Sbjct: 456 PKTFD---------SDDLIPPYLDQY----FYSHIGHH 480
Score = 60.6 bits (146), Expect = 1e-09
Identities = 76/487 (15%), Positives = 151/487 (31%), Gaps = 163/487 (33%)
Query: 17 FTTNECCRTEI----NSEEQIF-----------SVISAF--DIPQFDY------------ 47
+ E I ++ ++ F ++ + +Y
Sbjct: 46 LSKEEI--DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR 103
Query: 48 DPDLKKFKLVDKKRKLCADSDAKSKLFRERYNIIRQRTLRHSLFNNINPN---------- 97
P + ++++ +L D+ +K R + LR +L + P
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK--LRQALL-ELRPAKNVLIDGVLG 160
Query: 98 ------ADSVKLD------------WVEYLMSLTNVNHKTVVLGMISQLKENITTSGLLG 139
A V L W ++L N N VL M+ +L I +
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFW----LNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 140 KHQSPHL------------NLL-------CLI-----W----VKIF--ICTLIFIFIILI 169
S ++ LL CL+ F C IL+
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK------ILL 270
Query: 170 ISLCSFSFNSSQVPTDVQGPVTAFETYHNLVPLILHPVIPVSNREQNNIM-NWLKLSSEC 228
+ QV TD ++A T H + L H + ++ E +++ +L +
Sbjct: 271 TT------RFKQV-TDF---LSAATTTH--ISLD-HHSMTLTPDEVKSLLLKYLDCRPQD 317
Query: 229 CRTEINSEE-QIFSVISAF---DIPQFDYDPDLKKFKLVDKKRKLCADSDAKSKLFRERY 284
E+ + + S+I+ + +D + KL + + + +R+ +
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL-TTIIESSLNV-LEPAEYRKMF 375
Query: 285 NIIRQRTLRHSLFN---NINPNADSVKLDWVEY----LMSLTNVNHKTVVLGMISQLKEN 337
+ + S+F +I P + L W + +M + N HK ++ Q KE+
Sbjct: 376 DRL-------SVFPPSAHI-P-TILLSLIWFDVIKSDVMVVVNKLHKYSLV--EKQPKES 424
Query: 338 RYFLEDPTGIVQLDLS-----QTSYHPGLYTENCIVLVEGHYKDQILHVDALGFPPPEAS 392
+ + L+L + + H +V+ HY D+ PP
Sbjct: 425 TISIPS----IYLELKVKLENEYALH--------RSIVD-HYNIP-KTFDSDDLIPPYLD 470
Query: 393 KNSRLYF 399
+ YF
Sbjct: 471 Q----YF 473
Score = 33.7 bits (76), Expect = 0.29
Identities = 38/232 (16%), Positives = 67/232 (28%), Gaps = 69/232 (29%)
Query: 465 MATNPCRVQYCSQEILVVREELLSK---------MCRNCIKFPEEGDISKHVSKNNGEKD 515
M QY ++IL V E+ M ++ + E I +G
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 516 IIFLIVPK------IYVEGTVTSKVLSPALPKFITSEFQGFVPNSTMATNPCRVQYCSQE 569
+ + ++ K +VE VL F+ S + + Y Q
Sbjct: 67 LFWTLLSKQEEMVQKFVEE-----VLRINYK-FLMSPIK----TEQRQPSMMTRMYIEQ- 115
Query: 570 ILVVREELLSKMCRNCIKFPEEGDISKHFV-RTLVSQGTLVSLPLNLCPVYWSQYGALSL 628
++ + F K+ V R + L L + L L
Sbjct: 116 --------RDRLYNDNQVFA------KYNVSR--------LQPYLKL------RQALLEL 147
Query: 629 YPLPDLVILG-----------DQLNAYTIQNTDCIFINPVFHNTVRNAFEVE 669
P +++I G D +Y +Q C +F ++N E
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQ---CKMDFKIFWLNLKNCNSPE 196
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.4 bits (125), Expect = 5e-07
Identities = 104/603 (17%), Positives = 183/603 (30%), Gaps = 187/603 (31%)
Query: 176 SFNSS-QVPTDVQG----PVTAFETYHNLVPLILHPVI-PVSNREQNNIMNWLKLSSECC 229
FN PT+ P T E LV L V V + L L
Sbjct: 36 QFNKILPEPTEGFAADDEPTTPAE----LVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEF 91
Query: 230 RTEINSEEQIFSVISAFDIPQFDYDPDLKKFKLVDK---------KRKLCADSDAKSKLF 280
I ++ + + D L K K + K KR D + S LF
Sbjct: 92 ENCYLEGNDIHALAAKLLQ---ENDTTLVKTKELIKNYITARIMAKRPF--DKKSNSALF 146
Query: 281 RERYNIIRQRTLR-HSLFN---NINPNADSVKLDWVEYLMSLTNVNHKT-------VVLG 329
R + + + ++F N + D+ E L L ++T ++
Sbjct: 147 RA----VGEGNAQLVAIFGGQGNTD--------DYFEELRDL----YQTYHVLVGDLIKF 190
Query: 330 MISQLKE--------NRYFLEDPTGIVQLD----LSQTSYHPGL-YTENC------IVLV 370
L E + F G L+ L S P Y + I ++
Sbjct: 191 SAETLSELIRTTLDAEKVF---TQG---LNILEWLENPSNTPDKDYLLSIPISCPLIGVI 244
Query: 371 E-GHYKDQILHVDALGFPPPEASKNSRLYFG-NQNIWGGPSPVSLKSVNRMTKMEKNNEN 428
+ HY ++ LGF P E + G +Q + + V++ + +
Sbjct: 245 QLAHY---VVTAKLLGFTPGELRSYLKGATGHSQGL---VTAVAIAETDSWESFFVSVRK 298
Query: 429 AMIVILSDVHLDNDKVRNNLCEFITSEFQGFVPNSTMATNPCRVQYCSQE-------ILV 481
A+ V+ FI PN+++ P ++ + +L
Sbjct: 299 AITVLF----------------FIGVRCYEAYPNTSLP--PSILEDSLENNEGVPSPMLS 340
Query: 482 VR----EELLSKMCRNCIKFPEEGDISKHVSKNNGEKDIIFLIVPKIYVEGTVTS-KVLS 536
+ E++ + + P + +S NG K+++ V G S L+
Sbjct: 341 ISNLTQEQVQDYVNKTNSHLPAGKQV--EISLVNGAKNLV--------VSGPPQSLYGLN 390
Query: 537 PALPKFITSEFQGFVPNSTMATNPCRVQYCSQEILVVREELLSKMCRNCIKFPEEGDISK 596
L K P+ + R+ + S+ L L P ++
Sbjct: 391 LTLRK-------AKAPS---GLDQSRIPF-SERKLKFSNRFL----------P----VAS 425
Query: 597 HF--------VRTLVSQGTLVSLPLN---L-CPVYWSQYGALSLYPLPDLVILGDQLNAY 644
F + ++ N + PVY + G+ DL +L ++
Sbjct: 426 PFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGS-------DLRVLSGSISER 478
Query: 645 TIQNTDCIFINPV-FHNTVRNAFEVEKEHHAV------SSGVWLIQSSFKP----EVIYV 693
+ DCI PV + T + K H + +SG+ ++ K VI
Sbjct: 479 IV---DCIIRLPVKWETTTQF-----KATHILDFGPGGASGLGVLTHRNKDGTGVRVIVA 530
Query: 694 GEL 696
G L
Sbjct: 531 GTL 533
Score = 47.4 bits (112), Expect = 2e-05
Identities = 89/558 (15%), Positives = 173/558 (31%), Gaps = 192/558 (34%)
Query: 6 DNPSCTYDL----IEFTTNECCRTEINSEEQIFS-VISAF--------DI-------PQF 45
D P+ +L + + ++ +++ +Q+ + ++ F DI Q
Sbjct: 52 DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE 111
Query: 46 DYDPDLKKFKLV----------DKKRKLCADS-------DAKSKLF-------------- 74
+ +K +L+ + ++S + ++L
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE 171
Query: 75 --RERYNI----IRQ--RTLRHSLFNNINPNADSVKL--------DWVE---------YL 109
R+ Y + + +L I D+ K+ +W+E YL
Sbjct: 172 ELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYL 231
Query: 110 MS---------LTNVNHKTV---VLGMI-SQLKENITTSGLLGKHQSPHLNLLCLI---- 152
+S + + H V +LG +L+ + G G Q L+
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYL--KGATGHSQG-------LVTAVA 282
Query: 153 ------W---VKIFICTLIFIFIILIISLCSFSFNSSQVPTDVQGPVTAFETYHNLVPLI 203
W + +F I + ++ N+S P+ ++ + E VP
Sbjct: 283 IAETDSWESFFVSVRKAITVLFFIGVRCYEAYP-NTSLPPSILEDSLENNEG----VP-- 335
Query: 204 LHPVIPVSNREQNNIMNWLKLSSECCRTEINSEEQIF-S--------VISAFDIPQFDYD 254
P++ +SN Q + +++ + + + +Q+ S V+S PQ
Sbjct: 336 -SPMLSISNLTQEQVQDYVNK----TNSHLPAGKQVEISLVNGAKNLVVSGP--PQ---- 384
Query: 255 PDLKKFKLVDKKRKLCADSDAKSKLFRERYNIIRQRTLR-----HSLFNNINPNADSVKL 309
L L +K K + D F ER R L HS + P +D +
Sbjct: 385 -SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHL--LVPASDLINK 441
Query: 310 DWVEYLMSLTNVNHKTVVLGMISQLKENRYFLEDPTGIVQLDLSQTSYHPGLYTENCIVL 369
D V+ +S ++ Y D G DL S G +E +
Sbjct: 442 DLVKNNVSFNA-----------KDIQIPVYDTFD--G---SDLRVLS---GSISER---I 479
Query: 370 VEGHYKDQILH--VD---ALGFPPPEASKNSRLYFGNQNIWGGPSPVSLKSVNRMTKMEK 424
V D I+ V F L F GP S + +T K
Sbjct: 480 V-----DCIIRLPVKWETTTQFKATHI-----LDF-------GPGGAS--GLGVLTHRNK 520
Query: 425 NNENAMIVILSDVHLDND 442
+ +++ + ++ D
Sbjct: 521 DGTGVRVIVAGTLDINPD 538
Score = 37.7 bits (87), Expect = 0.014
Identities = 42/256 (16%), Positives = 79/256 (30%), Gaps = 73/256 (28%)
Query: 510 NNGEKDIIFLIVPKIYVEGTVT----SKVLSPALPKF-----------ITSEFQGFVPNS 554
++G + + L+ + + +K+L F + +F G+V S
Sbjct: 12 SHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYV--S 69
Query: 555 TMATNPCRVQYCSQEILVVREELLSKMCRNCIKFPEEGDISKH-FVRTLV-SQGTLVSLP 612
++ Q+ ++L L++ + E DI H L+ T +
Sbjct: 70 SLVEPSKVGQF--DQVL---NLCLTEFENC---YLEGNDI--HALAAKLLQENDTTLVKT 119
Query: 613 LNLCPVYWSQYGALSLYPLPD-------L------------VILGDQ--LNAY-----TI 646
L Y A + P L I G Q + Y +
Sbjct: 120 KELIKNY---ITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDL 176
Query: 647 QNTDCIFINPVFHNT-------VRNAFEVEKEH-HAVSSGVWLIQSSFKPEVIYVGE--- 695
T + + + + +R + EK ++ WL S P+ Y+
Sbjct: 177 YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPI 236
Query: 696 ---LITWL-LGHHYVT 707
LI + L H+ VT
Sbjct: 237 SCPLIGVIQLAHYVVT 252
Score = 37.3 bits (86), Expect = 0.020
Identities = 58/450 (12%), Positives = 110/450 (24%), Gaps = 186/450 (41%)
Query: 46 DYDPD-----LKKF-----KLVDKKRKLCADSDAKSKL--FRERY----NIIRQRTLRHS 89
D +P + KF LV+ + D L F Y +I H+
Sbjct: 51 DDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI-------HA 103
Query: 90 L---FNNINPNADSVKLDWVE-YLMSLTNVNHKTVVLGMISQLKENITTSGLLGKHQSPH 145
L N + ++ Y+ + + + S L +
Sbjct: 104 LAAKLLQENDTTLVKTKELIKNYITARIMAKRPF----------DKKSNSALFRAVGEGN 153
Query: 146 LNLLCLIWVKIFICTLIF--IFIILIISLCSFSFNSSQVPTDVQGPVTA--------FET 195
++ IF QG ++T
Sbjct: 154 --------AQLV---AIFGG-----------------------QGNTDDYFEELRDLYQT 179
Query: 196 YHNLV-PLI------LHPVIPVSNREQN------NIMNWLKLSSECCRTEINSEEQIFSV 242
YH LV LI L +I + + NI+ WL N+ ++ + +
Sbjct: 180 YHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWL-------ENPSNTPDKDYLL 232
Query: 243 ISAFDIP-----QF----------DYDPDLKKFKLVDKKR------------KLCADSDA 275
P Q + P +L + A++D+
Sbjct: 233 SIPISCPLIGVIQLAHYVVTAKLLGFTPG----ELRSYLKGATGHSQGLVTAVAIAETDS 288
Query: 276 KSKLFRERYNIIRQRTLRHSLFNNINPNADSVKLDWVEYLMSLTNVNHKTVVLGMISQLK 335
F I LF ++ G+
Sbjct: 289 WESFFVSVRKAIT------VLF-------------FI----------------GVRCY-- 311
Query: 336 ENRYFLEDPTGIVQLDLSQTSYHPGLYTENCIVLVEGHYKDQIL-HVDALGFPPPEASK- 393
+ P + + + S + ++ + ++Q+ +V+ P +
Sbjct: 312 --EAY---PNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQV 366
Query: 394 -----NSRLYFGNQNIWGGPSPVSLKSVNR 418
N + GP P SL +N
Sbjct: 367 EISLVNGA----KNLVVSGP-PQSLYGLNL 391
>3flo_A DNA polymerase alpha subunit B; protein-protein complex,
phosphoesterase fold, OB fold, zinc-binding motif, DNA
replication; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Length = 460
Score = 44.4 bits (104), Expect = 1e-04
Identities = 47/385 (12%), Positives = 95/385 (24%), Gaps = 81/385 (21%)
Query: 326 VVLGMIS--------QLKENRYFLEDPT-----GIVQLDLS---QTSYHPGLYTENCIVL 369
+G I L LE V+LDLS + S+ G IV
Sbjct: 50 YAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFLG-----QIVA 104
Query: 370 VEGHY-KDQILHVDALGFPPPEASKNSRLYFGNQNIWGGPSPVSLKSVNRMTKMEKNNEN 428
+G V+++ P SPVS + + +
Sbjct: 105 FKGKNANGDYFTVNSILPLPYP-----------------NSPVSTSQELQEFQANLEGSS 147
Query: 429 AMIVILSDVH-LDNDKVRNNLCEFITSEFQGFVPNSTMATNPCR-VQYCSQEILVVREEL 486
+++ + +++ L EFI S P+ + P + + +
Sbjct: 148 LKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFP 207
Query: 487 LSKMCRNCIKFPEEGDISKHVSKNNGEKDIIFLIVPKIYVEGTVTSKVLSPALPKFITSE 546
K + + + + + ++P + +++ P I
Sbjct: 208 QFKTQPKTLDELFLKLFTPILKTISPHIQTV--LIP--STKDAISNHAAYP-QASLIRKA 262
Query: 547 FQGFVPNSTMATNPCRVQYCSQEILVVREELLSKMCRNCIKF-PEEGDISKHFVRTLVSQ 605
Q N NP Q + + ++ Q
Sbjct: 263 LQLPKRNFKCMANPSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQ 322
Query: 606 GTLVSL-----PLNLCP-----------------------------VYWSQYGALSLYPL 631
+ + P V +
Sbjct: 323 RRYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFS 382
Query: 632 PDLVILGDQLNAYTIQNTDCIFINP 656
PD++I+ +L + + + INP
Sbjct: 383 PDIMIIPSELQHFARVVQNVVVINP 407
>1gnl_A HCP, hybrid cluster protein; anaerobic desulfovibrio desulfuricans,
iron anomalous; HET: FSO; 1.25A {Desulfovibrio
desulfuricans} SCOP: e.26.1.1 PDB: 1gn9_A* 1oa0_A*
1upx_A*
Length = 544
Score = 30.3 bits (68), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 359 PGLYTENCIVLVEGHYKDQILHVDALGFP 387
P L T NC+V + YKD++ +GF
Sbjct: 301 PVLLTTNCLVPPKDSYKDRVYTTGIVGFT 329
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL
HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Length = 337
Score = 30.1 bits (68), Expect = 2.8
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 151 LIWVKIFICTLIFIFIILIISLCSFSFNSSQVPTDVQGPVTAFETYHNLVPLILHPVIPV 210
L F LIF+ + ++ ++ F + + + N ++ +IP+
Sbjct: 38 LFPWVYFFSFLIFLVVAGSLAYVTWKFRARP----EDQEEPP-QIHGNDRLEVVWTLIPL 92
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.137 0.415
Gapped
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 10,718,306
Number of extensions: 625003
Number of successful extensions: 1072
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1068
Number of HSP's successfully gapped: 19
Length of query: 707
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 607
Effective length of database: 3,909,693
Effective search space: 2373183651
Effective search space used: 2373183651
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.0 bits)