Your job contains 1 sequence.
>psy2632
MSVFQTGPDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNG
LIVAKDICQGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSG
QSQLIVKGGTNADMAPPIDYYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGGGEVNVDVTP
VQYIRPIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTY
QLSSDKAIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFD
EHTQDQLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSCIIECQG
MGFVNKNWGRKTFH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2632
(374 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C1Y0 - symbol:RTCD1 "Uncharacterized protein"... 832 5.0e-83 1
UNIPROTKB|O00442 - symbol:RTCA "RNA 3'-terminal phosphate... 809 1.4e-80 1
ZFIN|ZDB-GENE-030131-9687 - symbol:rtca "RNA 3'-terminal ... 804 4.7e-80 1
UNIPROTKB|E2RQG6 - symbol:RTCA "Uncharacterized protein" ... 803 6.0e-80 1
UNIPROTKB|Q2HJ88 - symbol:RTCA "RNA 3'-terminal phosphate... 801 9.7e-80 1
RGD|1303111 - symbol:Rtcd1 "RNA terminal phosphate cyclas... 799 1.6e-79 1
MGI|MGI:1913618 - symbol:Rtca "RNA 3'-terminal phosphate ... 795 4.2e-79 1
UNIPROTKB|F1S564 - symbol:RTCA "Uncharacterized protein" ... 712 2.6e-70 1
FB|FBgn0025630 - symbol:CG4061 species:7227 "Drosophila m... 615 5.0e-60 1
DICTYBASE|DDB_G0276159 - symbol:rtc1 "RNA 3'-terminal pho... 546 1.0e-52 1
UNIPROTKB|P46849 - symbol:rtcA "RNA 3'-terminal phosphate... 421 1.8e-39 1
UNIPROTKB|E1C1K6 - symbol:RCL1 "Uncharacterized protein" ... 255 1.6e-20 1
UNIPROTKB|E2RAG1 - symbol:RCL1 "Uncharacterized protein" ... 245 4.0e-19 1
UNIPROTKB|Q9Y2P8 - symbol:RCL1 "RNA 3'-terminal phosphate... 244 5.6e-19 1
UNIPROTKB|G3V7Z1 - symbol:Rcl1 "Protein Rcl1" species:101... 244 5.6e-19 1
MGI|MGI:1913275 - symbol:Rcl1 "RNA terminal phosphate cyc... 243 7.4e-19 1
UNIPROTKB|F1SK46 - symbol:RCL1 "Uncharacterized protein" ... 236 6.2e-18 1
DICTYBASE|DDB_G0282803 - symbol:rcl1 "RNA 3'-terminal pho... 235 7.9e-18 1
UNIPROTKB|Q2KHX8 - symbol:RCL1 "RNA 3'-terminal phosphate... 235 8.2e-18 1
POMBASE|SPAC12G12.06c - symbol:SPAC12G12.06c "rRNA proces... 232 1.6e-17 1
ZFIN|ZDB-GENE-040930-11 - symbol:rcl1 "RNA terminal phosp... 231 2.3e-17 1
WB|WBGene00022852 - symbol:ZK1127.5 species:6239 "Caenorh... 219 8.7e-16 1
ASPGD|ASPL0000067962 - symbol:AN7762 species:162425 "Emer... 201 5.5e-15 2
FB|FBgn0020909 - symbol:Rtc1 "Rtc1" species:7227 "Drosoph... 186 6.8e-12 1
TAIR|locus:504956443 - symbol:AT5G22100 species:3702 "Ara... 183 1.4e-11 1
SGD|S000005370 - symbol:RCL1 "Endonuclease that cleaves p... 181 2.3e-11 1
CGD|CAL0001795 - symbol:RCL1 species:5476 "Candida albica... 178 5.2e-11 1
UNIPROTKB|Q5VZU3 - symbol:RCL1 "RNA 3'-terminal phosphate... 133 3.4e-08 1
UNIPROTKB|A6NIC1 - symbol:RTCA "RNA 3'-terminal phosphate... 125 2.6e-07 1
ASPGD|ASPL0000041674 - symbol:AN1474 species:162425 "Emer... 129 2.1e-05 1
>UNIPROTKB|E1C1Y0 [details] [associations]
symbol:RTCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396
SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 CTD:295395
EMBL:AADN02012905 IPI:IPI00602093 RefSeq:XP_422311.1
UniGene:Gga.9061 PRIDE:E1C1Y0 Ensembl:ENSGALT00000008464
GeneID:424468 KEGG:gga:424468 NextBio:20826795 Uniprot:E1C1Y0
Length = 365
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 176/365 (48%), Positives = 237/365 (64%)
Query: 9 DVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDIC 68
D + IDG ++EGGGQILR++ S LL P+ V IRAGR +PGL QHL+GL + +D+C
Sbjct: 4 DRVEIDGGIMEGGGQILRVSTALSCLLGLPLRVRRIRAGRSQPGLRPQHLSGLEIVRDLC 63
Query: 69 QGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKG 128
+G LE IGSTEI F PG I G AD+KTAGSV L+MQVA+P +LF++ S+L KG
Sbjct: 64 EGNLEGGEIGSTEITFTPGKIKGGTHIADTKTAGSVCLLMQVAMPCVLFAASPSELHFKG 123
Query: 129 GTNADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPI 187
GTNA+MAP IDY + +++P+ F F FN DI +RG++P+GGGEV V ++PV+ + PI
Sbjct: 124 GTNAEMAPQIDYTVMVFKPIVEKFNFTFNCDIK--KRGYYPQGGGEVIVRMSPVKELSPI 181
Query: 188 ELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKA 247
+LT+RG +T ++G AFVAG + + A+ M+ A + K D + I T + D+A
Sbjct: 182 DLTERGAVTKIYGRAFVAGALPIKLAKDMSAAAVRCIRKEIRDLY--INIQTVREPDDQA 239
Query: 248 IGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQL 307
G GSG+ I A TSTG +G G + G+ AA+ L +L D+ QDQL
Sbjct: 240 FGTGSGIIIVAETSTGCLLAGSSLGRRGKNSDRVGIEAAEILLKNLKHGGAVDDSLQDQL 299
Query: 308 IVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNII--EHEDKS---CIIECQGMG 362
I+ MALAKG SRV+ G ++LHT+TAIH AE +T AKF + E ED S IIECQGMG
Sbjct: 300 IIFMALAKGVSRVKSGPVTLHTQTAIHFAEQLTKAKFTVTKSEEEDPSKDTYIIECQGMG 359
Query: 363 FVNKN 367
+N N
Sbjct: 360 MINSN 364
>UNIPROTKB|O00442 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654
GO:GO:0003723 EMBL:CH471097 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AL445928 eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:Y11651 EMBL:Y11652
EMBL:AL663111 EMBL:BC012604 IPI:IPI00011726 IPI:IPI00221327
PIR:T48844 RefSeq:NP_001124313.1 RefSeq:NP_003720.1
UniGene:Hs.484222 ProteinModelPortal:O00442 SMR:O00442
IntAct:O00442 STRING:O00442 PhosphoSite:O00442 PaxDb:O00442
PRIDE:O00442 DNASU:8634 Ensembl:ENST00000260563
Ensembl:ENST00000370128 GeneID:8634 KEGG:hsa:8634 UCSC:uc001dtc.3
UCSC:uc001dtd.3 GeneCards:GC01P100732 HGNC:HGNC:17981 HPA:HPA027982
HPA:HPA028151 MIM:611286 neXtProt:NX_O00442 PharmGKB:PA34877
ChiTaRS:RTCA GenomeRNAi:8634 NextBio:32367 PMAP-CutDB:O00442
ArrayExpress:O00442 Bgee:O00442 CleanEx:HS_RTCD1
Genevestigator:O00442 Uniprot:O00442
Length = 366
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 175/368 (47%), Positives = 238/368 (64%)
Query: 7 GPDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKD 66
GP V +DGS++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D
Sbjct: 3 GPRV-EVDGSIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRD 61
Query: 67 ICQGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIV 126
+C G+LE A IGSTEI F P I G AD+KTAGSV L+MQV++P +LF++ S+L +
Sbjct: 62 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 121
Query: 127 KGGTNADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIR 185
KGGTNA+MAP IDY + +++P+ F F FN DI RG++PKGGGEV V ++PV+ +
Sbjct: 122 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKT--RGYYPKGGGEVIVRMSPVKQLN 179
Query: 186 PIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSD 245
PI LT+RG +T ++G AFVAG + A+ MA A + K D + I Q D
Sbjct: 180 PINLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLY--VNIQPVQEPKD 237
Query: 246 KAIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQD 305
+A GNG+G+ I A TSTG ++G G + + G+ AA+ L ++L DE+ QD
Sbjct: 238 QAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQD 297
Query: 306 QLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDK------SCIIECQ 359
QLIV MALA G SR++ G ++LHT+TAIH AE + AKF + + ED+ + IIECQ
Sbjct: 298 QLIVFMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQ 357
Query: 360 GMGFVNKN 367
G+G N N
Sbjct: 358 GIGMTNPN 365
>ZFIN|ZDB-GENE-030131-9687 [details] [associations]
symbol:rtca "RNA 3'-terminal phosphate cyclase"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-030131-9687
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:CR751228 EMBL:BC046087
EMBL:AY398409 IPI:IPI00501190 RefSeq:NP_955830.1 UniGene:Dr.104448
HSSP:P46849 STRING:Q7ZUX5 Ensembl:ENSDART00000021666 GeneID:321129
KEGG:dre:321129 InParanoid:Q7ZUX5 NextBio:20807244 Uniprot:Q7ZUX5
Length = 363
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 169/358 (47%), Positives = 232/358 (64%)
Query: 13 IDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQGRL 72
+DGSV+EGGGQILR++ S + I + IRAGR PGL QHL+GL + +D+C G L
Sbjct: 8 MDGSVMEGGGQILRVSAALSCIQGASIKINKIRAGRSTPGLRPQHLSGLELLRDMCNGNL 67
Query: 73 ENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNA 132
E A +GS+EI PG I GN AD+ TAGSVTL+MQV+LP LF+ G S+L +KGGTNA
Sbjct: 68 EGATVGSSEITLTPGKIKGGNHIADTHTAGSVTLLMQVSLPCALFAQGPSELCLKGGTNA 127
Query: 133 DMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQ 191
+MAP IDY + +++P+ F F+ D+ RG++PKGGGEV + V P + + PI +T+
Sbjct: 128 EMAPQIDYTVKVFKPIVERFGVQFDCDLR--MRGYYPKGGGEVVLKVNPAKELSPINMTE 185
Query: 192 RGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNG 251
RG +T ++G AFVAG + A+ M+ A + K D + I + Q DKA GNG
Sbjct: 186 RGNITKIYGRAFVAGVLPFKLAKDMSTAAIRTIRKEIKDLY--INIQSLQ-EKDKACGNG 242
Query: 252 SGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIVMM 311
+G+ I A +STG ++G G + G+ AA+ L ++ N C DE QDQLI+ M
Sbjct: 243 NGIIIIAESSTGCIFAGSSLGKKGVYADKVGIEAAEMLLRNIRHNGCVDEFLQDQLIIFM 302
Query: 312 ALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----IIECQGMGFVN 365
ALA GTSR+R G I+LHT+TAIH+AE +T+AKF I + ED++ IIECQG+G N
Sbjct: 303 ALANGTSRMRTGPITLHTQTAIHVAEQLTNAKFAISKAEDENANDTYIIECQGVGATN 360
>UNIPROTKB|E2RQG6 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
GO:GO:0006396 SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:AAEX03004772 Ensembl:ENSCAFT00000031847 OMA:IRAGREN
Uniprot:E2RQG6
Length = 540
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 170/362 (46%), Positives = 234/362 (64%)
Query: 11 LNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG 70
+ +DG ++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D+C G
Sbjct: 180 VEVDGGIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDG 239
Query: 71 RLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGT 130
+LE A IGSTEIIF P I G AD+KTAGSV L+MQV++P +LF++ S+L +KGGT
Sbjct: 240 QLEGAEIGSTEIIFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGT 299
Query: 131 NADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIEL 189
NA+MAP IDY +++P+ F F FN DI RG++PKGGGEV V ++PV+ + PI L
Sbjct: 300 NAEMAPQIDYTAMVFKPIVEKFGFQFNCDIK--MRGYYPKGGGEVIVRMSPVKQLNPINL 357
Query: 190 TQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIG 249
T RG +T ++G AFVAG + A+ MA A + K D + I Q D+A G
Sbjct: 358 TDRGSVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLY--VNIQPVQEPKDQAFG 415
Query: 250 NGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIV 309
NG+G+ I A TSTG ++G G + + G+ AA+ L ++L DE+ QDQLI+
Sbjct: 416 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGAVDEYLQDQLII 475
Query: 310 MMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDK------SCIIECQGMGF 363
MALA G SR++ G ++LHT+TAIH AE + AKF++ + ED+ + IIECQG+G
Sbjct: 476 FMALACGVSRIKTGPVTLHTQTAIHFAEQLAKAKFSVKKSEDEEDAAKDAYIIECQGIGM 535
Query: 364 VN 365
N
Sbjct: 536 TN 537
>UNIPROTKB|Q2HJ88 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0005654
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 EMBL:BC113251
IPI:IPI00705240 RefSeq:NP_001039520.1 UniGene:Bt.20917
ProteinModelPortal:Q2HJ88 STRING:Q2HJ88 Ensembl:ENSBTAT00000008293
GeneID:510469 KEGG:bta:510469 CTD:8634 HOGENOM:HOG000015264
HOVERGEN:HBG017761 InParanoid:Q2HJ88 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM NextBio:20869459 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
Uniprot:Q2HJ88
Length = 366
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 173/368 (47%), Positives = 235/368 (63%)
Query: 7 GPDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKD 66
GP V +DG ++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D
Sbjct: 3 GPRV-EVDGGIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRD 61
Query: 67 ICQGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIV 126
+C G+LE A IGSTEI F P I G AD+KTAGSV L+MQV++P +LF++ S+L +
Sbjct: 62 LCDGQLEGAEIGSTEITFTPEKIKGGVHTADTKTAGSVCLLMQVSMPCVLFAACPSELRL 121
Query: 127 KGGTNADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIR 185
KGGTNA+MAP IDY +++P+ F F FN DI RG++PKGGGEV V ++PV+ +
Sbjct: 122 KGGTNAEMAPQIDYTAMVFKPIVEKFGFTFNCDIK--MRGYYPKGGGEVIVRMSPVKQLS 179
Query: 186 PIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSD 245
PI LT RG +T ++G AFVAG + A+ MA A + K D + I Q D
Sbjct: 180 PINLTDRGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLY--VNIQPVQEPKD 237
Query: 246 KAIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQD 305
+A GNG+G+ I A TSTG ++G G + + G+ AA+ L ++L DE+ QD
Sbjct: 238 QAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGAVDEYLQD 297
Query: 306 QLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDK------SCIIECQ 359
QLI+ MALA G SR++ G ++LHT+TAIH AE + AKF + + ED+ + IIECQ
Sbjct: 298 QLIIFMALASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEDEEDASKDTYIIECQ 357
Query: 360 GMGFVNKN 367
G+G N N
Sbjct: 358 GIGMTNPN 365
>RGD|1303111 [details] [associations]
symbol:Rtcd1 "RNA terminal phosphate cyclase domain 1"
species:10116 "Rattus norvegicus" [GO:0003963 "RNA-3'-phosphate
cyclase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006396
"RNA processing" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 PIRSF:PIRSF005378 RGD:1303111
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473952
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 HOGENOM:HOG000015264
HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK OrthoDB:EOG4DR9CM
Gene3D:3.30.360.20 InterPro:IPR013791 SUPFAM:SSF52913
TIGRFAMs:TIGR03399 EMBL:BC079374 IPI:IPI00201443
RefSeq:NP_001004227.1 UniGene:Rn.25445 STRING:Q68FS8
Ensembl:ENSRNOT00000020149 GeneID:295395 KEGG:rno:295395
UCSC:RGD:1303111 CTD:295395 InParanoid:Q68FS8 NextBio:639497
Genevestigator:Q68FS8 Uniprot:Q68FS8
Length = 366
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 172/362 (47%), Positives = 233/362 (64%)
Query: 11 LNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG 70
+ +DG ++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D+C G
Sbjct: 6 VEVDGGIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCDG 65
Query: 71 RLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGT 130
LE A IGSTEI F P I G AD+KTAGSV L+MQV++P +LF++ S+L +KGGT
Sbjct: 66 HLEGAEIGSTEITFTPEKIRGGVHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGT 125
Query: 131 NADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIEL 189
NA+MAP IDY + +++P+ F F FN DI RG++PKGGGEV V ++PV+ + PI L
Sbjct: 126 NAEMAPQIDYTMMVFKPIAEKFGFTFNCDIKT--RGYYPKGGGEVIVRMSPVKRLDPINL 183
Query: 190 TQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIG 249
T RG +T ++G AFVAG + + A+ MA A L K D + I Q + D+A G
Sbjct: 184 TDRGSVTKIYGRAFVAGVLPLKVAKDMAAAAVRCLRKEIRDLY--VSIQPVQEARDQAFG 241
Query: 250 NGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIV 309
NGSG+ I A TSTG ++G G + + G+ AA+ L ++L DE+ QDQLI+
Sbjct: 242 NGSGIIIVAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLII 301
Query: 310 MMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNII---EHEDKS---CIIECQGMGF 363
MALA G SR++ G ++LHT+TAIH AE + AKF + E ED S IIEC+G+G
Sbjct: 302 FMALASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEEEEDASKDTYIIECEGVGM 361
Query: 364 VN 365
N
Sbjct: 362 AN 363
>MGI|MGI:1913618 [details] [associations]
symbol:Rtca "RNA 3'-terminal phosphate cyclase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 MGI:MGI:1913618 GO:GO:0005524
GO:GO:0005654 GO:GO:0006396 EMBL:CH466532 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AK009245 EMBL:AK152129
EMBL:AK159961 IPI:IPI00110315 RefSeq:NP_079793.2 UniGene:Mm.251228
ProteinModelPortal:Q9D7H3 SMR:Q9D7H3 STRING:Q9D7H3
PhosphoSite:Q9D7H3 REPRODUCTION-2DPAGE:Q9D7H3 PaxDb:Q9D7H3
PRIDE:Q9D7H3 Ensembl:ENSMUST00000000348 GeneID:66368 KEGG:mmu:66368
InParanoid:Q3TVV2 NextBio:321465 PMAP-CutDB:Q9D7H3 Bgee:Q9D7H3
CleanEx:MM_RTCD1 Genevestigator:Q9D7H3
GermOnline:ENSMUSG00000000339 Uniprot:Q9D7H3
Length = 366
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 168/362 (46%), Positives = 234/362 (64%)
Query: 11 LNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG 70
+ +DG ++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D+C G
Sbjct: 6 VEVDGGIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCGG 65
Query: 71 RLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGT 130
LE A IGSTEI F P I G AD+KTAGSV L+MQV++P +LF++ S+L +KGGT
Sbjct: 66 HLEGAEIGSTEITFTPEKIRGGVHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGT 125
Query: 131 NADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIEL 189
NA+MAP IDY + +++P+ F F FN DI RG++PKGGGEV V V+PV+ + PI L
Sbjct: 126 NAEMAPQIDYTMMVFKPIAEKFGFTFNCDIKT--RGYYPKGGGEVIVRVSPVKRLDPINL 183
Query: 190 TQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIG 249
T RG +T ++G AFVAG + + A+ MA A + K D + I Q + D+A G
Sbjct: 184 TDRGSVTKIYGRAFVAGVLPLKVAKDMAAAAVRCIRKEIRDLY--VSIQPVQEARDQAFG 241
Query: 250 NGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIV 309
NGSG+ I A TSTG ++G G + + G+ AA+ L ++L DE+ QDQLI+
Sbjct: 242 NGSGIIIVAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLII 301
Query: 310 MMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDK------SCIIECQGMGF 363
MALA G SR++ G ++LHT+TAIH AE + AKF + + E++ + +IEC+G+G
Sbjct: 302 FMALANGISRIKTGSVTLHTQTAIHFAEQLAKAKFTVKKSEEEEDATKDTYVIECEGIGM 361
Query: 364 VN 365
N
Sbjct: 362 AN 363
>UNIPROTKB|F1S564 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963
OMA:RRGHYPK InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:CU466517 Ensembl:ENSSSCT00000007518 Uniprot:F1S564
Length = 365
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 161/369 (43%), Positives = 223/369 (60%)
Query: 7 GPDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKD 66
GP V +DG ++EGGGQILR++ S LL P+ V IRAGR PGL QHL+GL + +D
Sbjct: 3 GPRV-EVDGGIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRD 61
Query: 67 ICQGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIV 126
+C G+LE A IGSTEI+F P I G AD+KTAGSV L+MQV++P +LF++ S+L +
Sbjct: 62 LCDGQLEGAEIGSTEIMFTPEKIKGGTHTADTKTAGSVCLLMQVSMPCVLFAASPSELRL 121
Query: 127 KGGTNADMAPPIDYYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIR 185
KGGTNA+MAP IDY +++P+ F F FN DI RG++PKGGGEV V ++PV+ +
Sbjct: 122 KGGTNAEMAPQIDYTAMVFKPIVEKFGFTFNCDIK--MRGYYPKGGGEVIVRMSPVKQLN 179
Query: 186 PIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKL-KITTYQLSS 244
PI LT RG + GH+F +G + A M D + + K K + Q
Sbjct: 180 PINLTDRGSVIKSHGHSFCSGIMPFKVAYQM-DAGSIRCCRE--NIKEMFCKFSPVQQVH 236
Query: 245 DKAIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQ 304
D + +G+ I + ST S G + + G+ AA+ L ++L DE+ Q
Sbjct: 237 DFLFCDSNGI-IQTSQSTSGLLSSSSLGEIGVNADKVGIEAAEVLLANLRHGGAVDEYLQ 295
Query: 305 DQLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDK------SCIIEC 358
DQLI+ MALA G SR++ G ++LHT+TAIH AE + AKF + + ED+ + IIEC
Sbjct: 296 DQLIIFMALASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEDEEDASKDTYIIEC 355
Query: 359 QGMGFVNKN 367
QG+G N N
Sbjct: 356 QGIGMTNPN 364
>FB|FBgn0025630 [details] [associations]
symbol:CG4061 species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654 EMBL:AE014298
GO:GO:0006396 EMBL:AL031765 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AY052112
PIR:T13745 RefSeq:NP_569977.1 UniGene:Dm.33463
ProteinModelPortal:O77264 SMR:O77264 DIP:DIP-23093N
MINT:MINT-990359 STRING:O77264 PRIDE:O77264
EnsemblMetazoa:FBtr0070330 GeneID:31175 KEGG:dme:Dmel_CG4061
UCSC:CG4061-RA FlyBase:FBgn0025630 InParanoid:O77264
OrthoDB:EOG4R4XJ8 PhylomeDB:O77264 GenomeRNAi:31175 NextBio:772313
Bgee:O77264 GermOnline:CG4061 Uniprot:O77264
Length = 361
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 135/357 (37%), Positives = 202/357 (56%)
Query: 10 VLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQ 69
+L IDGS LEGGGQ LR A+ S +L +P+ V IRA R PGL+ QHL+GL + +DI
Sbjct: 6 MLEIDGSYLEGGGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITN 65
Query: 70 GRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGG 129
+ ++ S+ + F P I + ++ TA S+TLI Q+ALP+LLF+ S+LIV GG
Sbjct: 66 ADVVGNYLLSSTVEFTPRTILDNTYRVETHTAASITLIYQMALPVLLFAGRPSRLIVSGG 125
Query: 130 TNADMAPPIDYYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIEL 189
TN D APP++Y + P HF + D+ R GF+P+G G +DV PV + +L
Sbjct: 126 TNVDFAPPVEYMQEVLLPNLKHF-GVSFDLKVQRYGFYPRGQGRCQLDVQPVTKLNSGKL 184
Query: 190 TQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIG 249
G + +V G A+ AG + +N A M TA + + +P + I + S KA
Sbjct: 185 VAFGRIKSVSGVAYCAGRLPVNIAIDMQQTAQREIHRLWPS--QQCSIEPIKHSRQKAFH 242
Query: 250 NGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIV 309
NG+G+ + T++ G R G A+ +L + + +C D++ QDQLI+
Sbjct: 243 NGAGILMTVNTTSDVVLGASALGKKRIDGHVLGSEASCQLGDYMRKQVCVDDYMQDQLII 302
Query: 310 MMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSCIIECQGMGFVNK 366
MALA G S +R G+++ HTRTAI++AE MT KF++ ++ C+G+G VNK
Sbjct: 303 YMALAVGRSTMRTGKLTNHTRTAINVAEQMTGVKFDVAMEPGGQMLVSCKGLGHVNK 359
>DICTYBASE|DDB_G0276159 [details] [associations]
symbol:rtc1 "RNA 3'-terminal phosphate cyclase"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 dictyBase:DDB_G0276159
GO:GO:0005524 GO:GO:0005654 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006396 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 KO:K01974
OMA:RRGHYPK Gene3D:3.30.360.20 InterPro:IPR013791
TIGRFAMs:TIGR03399 EMBL:AF020279 RefSeq:XP_643263.1
ProteinModelPortal:O15746 STRING:O15746 EnsemblProtists:DDB0185053
GeneID:8620306 KEGG:ddi:DDB_G0276159 ProtClustDB:CLSZ2430913
Uniprot:O15746
Length = 433
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 131/368 (35%), Positives = 207/368 (56%)
Query: 8 PDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDI 67
PD IDGS+LEGGGQILR ++ + L ++ I + IR R +PGL QH G+ + +
Sbjct: 34 PD-FKIDGSILEGGGQILRNSVALASLFNKAISIEKIRYNRDQPGLKNQHKAGIDLMSRL 92
Query: 68 CQGRLENAHIGSTEIIFYPGNIT---SGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQL 124
+ L +GS ++ + P T G AD+KTAGS+ L++QV+LP L+F+ +++
Sbjct: 93 FKAHLTGCSVGSCKLYYQPTQKTIQDDGVIEADTKTAGSICLMIQVSLPCLIFAPHSTKM 152
Query: 125 IVKGGTNADMAPPIDYYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGGGEVNVDVTPV-QY 183
++ GGTN D AP DY +++ P+ F ++ +RGF+PKGGG V + P+ Q
Sbjct: 153 VLGGGTNCDFAPAADYIQNVFLPI-ATTMGFKCEMSIDKRGFYPKGGGAVTLTTQPLTQP 211
Query: 184 IRPIELTQRGELTAVWGHA-FVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQL 242
+ PI + +GE+ + + F + + A+ M +TA L+K DFK K+ + T +
Sbjct: 212 LSPITIVNKGEVNRIVIKSYFTSPRISPLVAERMNNTAKK-LIKK--DFK-KVDVETELI 267
Query: 243 SSDK-AIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDE 301
K + G+G+ + I A T G + NG+ + +AA L L + C DE
Sbjct: 268 DVSKFSFGDGTFIEIRAYTDQGCIFGATGNGAIGVPAEKVAEDAANSLLKDLQDGGCMDE 327
Query: 302 HTQDQLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNII------EHEDKSCI 355
+ QDQLI+ MALAKG S+++ G ISLHT+T+IHI LMT A F I + +++ +
Sbjct: 328 YLQDQLIIFMALAKGKSQIKTGPISLHTQTSIHITSLMTGAIFTITPLTNNTQSGEETNL 387
Query: 356 IECQGMGF 363
I C+G+ +
Sbjct: 388 ITCEGISY 395
>UNIPROTKB|P46849 [details] [associations]
symbol:rtcA "RNA 3'-terminal phosphate cyclase"
species:83333 "Escherichia coli K-12" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003963 "RNA-3'-phosphate
cyclase activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00200 InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 GO:GO:0005524 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U18997 GO:GO:0006396 SUPFAM:SSF55205 EMBL:M13585
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963
HOGENOM:HOG000015264 KO:K01974 OMA:RRGHYPK Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
RefSeq:YP_026219.1 RefSeq:YP_492013.1 PDB:1QMH PDB:1QMI PDB:3KGD
PDB:3TUT PDB:3TUX PDB:3TV1 PDB:3TW3 PDBsum:1QMH PDBsum:1QMI
PDBsum:3KGD PDBsum:3TUT PDBsum:3TUX PDBsum:3TV1 PDBsum:3TW3
ProteinModelPortal:P46849 SMR:P46849 PRIDE:P46849
EnsemblBacteria:EBESCT00000002096 EnsemblBacteria:EBESCT00000015819
GeneID:12932192 GeneID:2847707 KEGG:ecj:Y75_p3757 KEGG:eco:b4475
PATRIC:32122276 EchoBASE:EB2773 EcoGene:EG12938
ProtClustDB:PRK04204 BioCyc:EcoCyc:G7750-MONOMER
BioCyc:ECOL316407:JW5688-MONOMER BioCyc:MetaCyc:G7750-MONOMER
BRENDA:6.5.1.4 EvolutionaryTrace:P46849 Genevestigator:P46849
Uniprot:P46849
Length = 338
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 112/343 (32%), Positives = 169/343 (49%)
Query: 10 VLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQ 69
++ +DG+ EGGGQILR A+ S + +P + +IRAGR KPGL QHL + A +IC
Sbjct: 4 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICG 63
Query: 70 GRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGG 129
+E A +GS ++F PG + G++ +AGS TL++Q LP L F+ G S++ V GG
Sbjct: 64 ATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGG 123
Query: 130 TNADMAPPIDYYIHLWRPVFCHFFNFNIDIHD----VRRGFFPKGGGEVNVDVTPVQYIR 185
T+ APP D+ + P+ I IH +R GF+P GGG V +V+PV
Sbjct: 124 TDNPSAPPADFIRRVLEPLLA-----KIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFN 178
Query: 186 PIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSD 245
++L +RG + + G +AG V + A+ T L S+ + + + L D
Sbjct: 179 TLQLGERGNIVQMRGEVLLAG-VPRHVAEREIAT----LAGSFSLHEQNI----HNLPRD 229
Query: 246 KAIGNGSGVYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQD 305
+ GN + + + T R+ G R S KE+ L E+ D
Sbjct: 230 QGPGNTVSLEVESENIT-ERFF--VVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLAD 286
Query: 306 QLIVMMALAKGTSRVRVGQISLHTRTAIHIAELMTSAKFNIIE 348
QL++ MALA G V S H T I + E +F++IE
Sbjct: 287 QLVLPMALA-GAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIE 328
>UNIPROTKB|E1C1K6 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AADN02066346 EMBL:AADN02066347
EMBL:AADN02066348 IPI:IPI00571045 RefSeq:XP_424808.1
UniGene:Gga.9558 Ensembl:ENSGALT00000024230 GeneID:427222
KEGG:gga:427222 NextBio:20828512 Uniprot:E1C1K6
Length = 374
Score = 255 (94.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 95/362 (26%), Positives = 156/362 (43%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLENAHIGS 79
G LR +V S L RP+ + IRA PGL + + + G R+E G+
Sbjct: 13 GCNFLRQRLVLSTLSGRPLKIRKIRAKEEDPGLRDFEACFIRLIDKVTNGSRIEINQTGT 72
Query: 80 TEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
T + + PG + G+ D + S+ ++ L L F +++++G TN + P +D
Sbjct: 73 T-LYYQPGLLYGGSLEHDCSPSRSIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 131
Query: 140 YYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYI-RPIELTQRGELT 196
P+ F +++I RRG PKGGGE+ + PV+ + +PI+ T G++
Sbjct: 132 VLKATALPLLKKFGIDGESLEIKINRRGMPPKGGGEI-LFACPVRKVLQPIQFTDPGKIK 190
Query: 197 AVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSGVYI 256
+ G A+ V A M ++A L K PD T + G G+ +
Sbjct: 191 RIRGTAYSVR-VSPQMANRMVESARSVLNKFLPDVYI---YTDHMKGISSGKSPGFGICL 246
Query: 257 FAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQLIVMM 311
A T G S +P+ P E G N AK L + C D Q +++M
Sbjct: 247 IAETINGTILSAELASNPQGQGAAVLPEELGQNCAKLLLEEIYRGGCVDSTNQSLALLLM 306
Query: 312 ALAK-GTSRVRVGQISLHTRTAI-HIA---ELMTSAKFNIIEHEDKS---CIIECQGMGF 363
L + S+V +G +S +T + H+ ++M + E E K ++ C G+GF
Sbjct: 307 TLGQQDVSKVLLGPLSPYTIEFLRHLRSFFQIMFKIEMKSPEEEHKGGEKVLMTCVGIGF 366
Query: 364 VN 365
N
Sbjct: 367 SN 368
>UNIPROTKB|E2RAG1 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AAEX03000616 EMBL:AAEX03000617
EMBL:AAEX03000618 RefSeq:XP_541299.3 Ensembl:ENSCAFT00000003309
GeneID:484183 KEGG:cfa:484183 NextBio:20858399 Uniprot:E2RAG1
Length = 373
Score = 245 (91.3 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 94/369 (25%), Positives = 153/369 (41%)
Query: 16 SVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLEN 74
S+ G LR V S L RP+ + IRA PGL + + + + G R+E
Sbjct: 7 SLSYAGCNFLRQRQVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKVTNGSRIEI 66
Query: 75 AHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADM 134
G+T + + PG + G+ D S+ ++ L L F +++++G TN +
Sbjct: 67 NQTGTT-LYYQPGLLYGGSVEHDCNVLRSIGYYLESLLCLAPFMKHPLRIVLRGVTNDQV 125
Query: 135 APPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQR 192
P +D P+ F + ++ VRRG P GGGEV + ++PI+LT
Sbjct: 126 DPSVDVLKATALPLLKQFGIDGESFELKVVRRGMPPGGGGEVFFSCPVRKVLKPIQLTDP 185
Query: 193 GELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGS 252
G++ + G A+ V A + D+A L K PD T + + G
Sbjct: 186 GKIKRIRGTAYSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGINSGKSPGF 241
Query: 253 GVYIFAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQL 307
G+ + A T+ G S +P+ P + G N AK L + C D Q
Sbjct: 242 GLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTNQSLA 301
Query: 308 IVMMALAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------II 356
+++M L + S+V +G +S +T + + F I E K C ++
Sbjct: 302 LLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKI---ETKPCGEELKGGDKVLM 358
Query: 357 ECQGMGFVN 365
C G+GF N
Sbjct: 359 TCVGVGFSN 367
>UNIPROTKB|Q9Y2P8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
EMBL:AJ276894 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
EMBL:CH471071 SUPFAM:SSF55205 EMBL:AL353151 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 CTD:10171 HOVERGEN:HBG014327 OrthoDB:EOG4X97H9
EMBL:AK022904 EMBL:AL158147 EMBL:BC001025 EMBL:AF067172
EMBL:AF161456 IPI:IPI00294229 RefSeq:NP_005763.3 UniGene:Hs.194121
ProteinModelPortal:Q9Y2P8 SMR:Q9Y2P8 STRING:Q9Y2P8
PhosphoSite:Q9Y2P8 DMDM:90103518 PaxDb:Q9Y2P8 PeptideAtlas:Q9Y2P8
PRIDE:Q9Y2P8 DNASU:10171 Ensembl:ENST00000381750 GeneID:10171
KEGG:hsa:10171 UCSC:uc003zis.2 GeneCards:GC09P004782
HGNC:HGNC:17687 MIM:611405 neXtProt:NX_Q9Y2P8 PharmGKB:PA134894364
InParanoid:Q9Y2P8 PhylomeDB:Q9Y2P8 ChiTaRS:RCL1 GenomeRNAi:10171
NextBio:38512 ArrayExpress:Q9Y2P8 Bgee:Q9Y2P8 CleanEx:HS_RCL1
Genevestigator:Q9Y2P8 GO:GO:0003963 Uniprot:Q9Y2P8
Length = 373
Score = 244 (91.0 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 96/370 (25%), Positives = 157/370 (42%)
Query: 16 SVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLEN 74
S+ G LR +V S L RP+ + IRA PGL + + + I G R+E
Sbjct: 7 SLSYAGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEI 66
Query: 75 AHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADM 134
G+T + + PG + G+ D + ++ L L F +++++G TN +
Sbjct: 67 NQTGTT-LYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQV 125
Query: 135 APPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYI-RPIELTQ 191
P +D P+ F + ++ VRRG P GGGEV V PV+ + +PI+LT
Sbjct: 126 DPSVDVLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEV-VFSCPVRKVLKPIQLTD 184
Query: 192 RGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNG 251
G++ + G A+ V A + D+A L K PD T + + G
Sbjct: 185 PGKIKRIRGMAYSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGVNSGKSPG 240
Query: 252 SGVYIFAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQ 306
G+ + A T++G S +P+ P + G N A+ L + C D Q
Sbjct: 241 FGLSLVAETTSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSL 300
Query: 307 LIVMMALAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------I 355
+++M L + S+V +G +S +T + + F I E K C +
Sbjct: 301 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKI---ETKPCGEELKGGDKVL 357
Query: 356 IECQGMGFVN 365
+ C G+GF N
Sbjct: 358 MTCVGIGFSN 367
>UNIPROTKB|G3V7Z1 [details] [associations]
symbol:Rcl1 "Protein Rcl1" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473953 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
Ensembl:ENSRNOT00000020809 Uniprot:G3V7Z1
Length = 373
Score = 244 (91.0 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 91/369 (24%), Positives = 155/369 (42%)
Query: 16 SVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLEN 74
S+ G LR +V S L RP+ + IRA PGL + + + I G R+E
Sbjct: 7 SLSYAGCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEI 66
Query: 75 AHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADM 134
G+T + + PG + G+ D + ++ L L F +++++G TN +
Sbjct: 67 NQTGTT-LYYQPGLLYGGSVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQV 125
Query: 135 APPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQR 192
P +D P+ F + ++ +RRG P GGGEV + ++P++LT
Sbjct: 126 DPSVDVLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDP 185
Query: 193 GELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGS 252
G++ + G A+ V A + D+A L K PD T + + G
Sbjct: 186 GKIKRIRGMAYSVR-VSPQMANRIVDSARGILNKFIPDIYI---YTDHMKGVNSGKSPGF 241
Query: 253 GVYIFAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQL 307
G+ + A T+ G S +P+ P + G N AK L + C D +Q +
Sbjct: 242 GLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTSQSLV 301
Query: 308 IVMMALAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------II 356
+++M L + S+V +G +S +T + + F + E K C ++
Sbjct: 302 LLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKV---ETKPCGEELKGGDKVLM 358
Query: 357 ECQGMGFVN 365
C G+GF N
Sbjct: 359 TCVGIGFSN 367
>MGI|MGI:1913275 [details] [associations]
symbol:Rcl1 "RNA terminal phosphate cyclase-like 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
MGI:MGI:1913275 EMBL:AJ276895 GO:GO:0003824 GO:GO:0005730
SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 GeneTree:ENSGT00530000063404 HOVERGEN:HBG014327
OrthoDB:EOG4X97H9 ChiTaRS:RCL1 EMBL:AK009709 EMBL:BC004574
IPI:IPI00122220 RefSeq:NP_067500.1 UniGene:Mm.28630
ProteinModelPortal:Q9JJT0 SMR:Q9JJT0 STRING:Q9JJT0
PhosphoSite:Q9JJT0 PaxDb:Q9JJT0 PRIDE:Q9JJT0
Ensembl:ENSMUST00000064393 GeneID:59028 KEGG:mmu:59028
UCSC:uc008hda.1 InParanoid:Q9JJT0 NextBio:314610 Bgee:Q9JJT0
CleanEx:MM_RCL1 Genevestigator:Q9JJT0 GermOnline:ENSMUSG00000024785
Uniprot:Q9JJT0
Length = 373
Score = 243 (90.6 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 91/369 (24%), Positives = 153/369 (41%)
Query: 16 SVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLEN 74
S+ G LR +V S L RP+ + IRA PGL + + + I G R+E
Sbjct: 7 SLSYAGCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEI 66
Query: 75 AHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADM 134
G+T + + PG + G+ D + ++ L L F +++++G TN +
Sbjct: 67 NQTGTT-LYYQPGLLYGGSVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQV 125
Query: 135 APPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQR 192
P +D P+ F + ++ +RRG P GGGEV + ++P++LT
Sbjct: 126 DPSVDVLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDP 185
Query: 193 GELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGS 252
G++ + G A+ V A + D+A L K PD T + G
Sbjct: 186 GKIKRIRGMAYSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGVSSGKSPGF 241
Query: 253 GVYIFAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQL 307
G+ + A T+ G S +P+ P + G N AK L + C D Q +
Sbjct: 242 GLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTNQSLV 301
Query: 308 IVMMALAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------II 356
+++M L + S+V +G +S +T + + F + E K C ++
Sbjct: 302 LLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKV---ETKPCGEELKGGDKVLM 358
Query: 357 ECQGMGFVN 365
C G+GF N
Sbjct: 359 TCVGIGFSN 367
>UNIPROTKB|F1SK46 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 GeneTree:ENSGT00530000063404 EMBL:CU467061
Ensembl:ENSSSCT00000005750 Uniprot:F1SK46
Length = 373
Score = 236 (88.1 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 92/364 (25%), Positives = 151/364 (41%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLENAHIGS 79
G LR +V S L RP+ + IRA PGL + + + I G R+E G+
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 80 TEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
T + + PG + G+ D S+ ++ L L F +++++G TN + P +D
Sbjct: 72 T-LYYQPGLLYGGSVEHDCSILRSIGYYLESLLCLAPFMKHPLRIVLRGVTNDQVDPSVD 130
Query: 140 YYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQRGELTA 197
P+ F + ++ VRRG P GGGEV + ++PI+LT G++
Sbjct: 131 VLKVTALPLLKQFGIDGESFELKIVRRGMPPGGGGEVLFSCPVRKVLKPIQLTDPGKIKR 190
Query: 198 VWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSGVYIF 257
+ G + V A + D+A L K PD T + + G G+ +
Sbjct: 191 IRGCRYSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGVNSGKSPGFGLSLV 246
Query: 258 AATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQLIVMMA 312
A T+ G S +P+ P + G N A+ L + C D Q +++M
Sbjct: 247 AETTNGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMT 306
Query: 313 LAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------IIECQGM 361
L + S+V +G +S +T + + F I E K C ++ C G+
Sbjct: 307 LGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKI---ETKPCGEELKGGDKVLMTCVGI 363
Query: 362 GFVN 365
GF N
Sbjct: 364 GFSN 367
>DICTYBASE|DDB_G0282803 [details] [associations]
symbol:rcl1 "RNA 3'-terminal phosphate cyclase family
protein" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 dictyBase:DDB_G0282803
GO:GO:0045335 GO:GO:0003824 GO:GO:0005730 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_640201.2 ProteinModelPortal:Q54S38
STRING:Q54S38 EnsemblProtists:DDB0238227 GeneID:8623741
KEGG:ddi:DDB_G0282803 OMA:FISANTA ProtClustDB:CLSZ2430476
Uniprot:Q54S38
Length = 371
Score = 235 (87.8 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 92/372 (24%), Positives = 151/372 (40%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQGRLENAHIGST 80
G R ++ S L + I + NIR KPGL + L + I G + T
Sbjct: 6 GSTHFRQRIICSTLSGKAIRITNIRDEDEKPGLRDYEASFLRLVDKITNGSKIEINSTGT 65
Query: 81 EIIFYPGNITSGNFYA-DSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
+I + PG I G + T + ++ + L F+ + + G TN D+ ID
Sbjct: 66 QITYIPGIIIGGKGITHECGTVRGIGYFVEALICLGPFAKAPLDITLNGITNNDIDLTID 125
Query: 140 YYIHLWRPVFCHF-FNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQRGELTAV 198
P+ F + I ++RG P GGG VN V +++ I+L G++ +
Sbjct: 126 TIRTTTLPIIRKFGIEEGLIIKIIKRGAPPNGGGSVNFKCPIVPHLKAIQLIDEGKIRRI 185
Query: 199 WGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSGVYIFA 258
G A+ A + + + D A L++ PD + Y+ ++ + G G+ + A
Sbjct: 186 RGIAY-ATRISPQFSNRVLDKAKGLLLEYTPD--VYISSDHYK-GNESGLSPGYGLTLVA 241
Query: 259 ATSTGARYSGGC---NGSPRT------------SPGECGLNAAKELWSSLCENICFDEHT 303
T+TG S C G T +P + G A L + C D H
Sbjct: 242 ETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPEDLGERTAFALLEEIFNGGCIDSHN 301
Query: 304 QDQLIVMMALA-KGTSRVRVGQISLHTRTAIHIAELMTSAKFNII-EHEDKSCIIECQGM 361
Q ++ M L + S+VR+G+I+ +T I F I + K+ + C G+
Sbjct: 302 QSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIEPDQNSKTVLFTCLGI 361
Query: 362 GFVNKNWGRKTF 373
G+ KN R TF
Sbjct: 362 GY--KNMARSTF 371
>UNIPROTKB|Q2KHX8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 EMBL:BC112844 IPI:IPI00702914 RefSeq:NP_001070599.1
UniGene:Bt.27964 ProteinModelPortal:Q2KHX8 STRING:Q2KHX8
PRIDE:Q2KHX8 Ensembl:ENSBTAT00000024840 GeneID:768075
KEGG:bta:768075 CTD:10171 GeneTree:ENSGT00530000063404
HOVERGEN:HBG014327 InParanoid:Q2KHX8 OrthoDB:EOG4X97H9
NextBio:20918430 Uniprot:Q2KHX8
Length = 373
Score = 235 (87.8 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 91/369 (24%), Positives = 152/369 (41%)
Query: 16 SVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLEN 74
S+ G LR +V S L RP+ + IRA PGL + + + + G R+E
Sbjct: 7 SLSYSGCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKVTNGSRIEI 66
Query: 75 AHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADM 134
G+T + + PG + G+ D + ++ L L F +++++G TN +
Sbjct: 67 NQTGTT-LYYQPGLLYGGSMEHDCSVLRGIGYYLESLLCLAPFMKHPLRIVLRGVTNDQV 125
Query: 135 APPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQR 192
P +D P+ F + ++ VRRG P GGGEV + ++PI+L
Sbjct: 126 DPSVDVLKATALPLLKQFGIDGESFELKVVRRGMPPGGGGEVFFSCPVRKVLKPIQLIDP 185
Query: 193 GELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGS 252
G++ + G A+ V A + D+A L K PD T + + G
Sbjct: 186 GKIKRIRGMAYSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGINSGKSPGF 241
Query: 253 GVYIFAATSTGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQL 307
G+ + A T+ G S +P+ P + G N A+ L + C D Q
Sbjct: 242 GLSLVAETTNGTFLSAELASNPQGQGAAMLPEDLGRNCARLLLEEIYRGGCVDSTNQSLA 301
Query: 308 IVMMALAK-GTSRVRVGQISLHTRTAIHIAELMTSAKFNIIEHEDKSC----------II 356
+++M L + S+V +G +S +T + + F I E K C ++
Sbjct: 302 LLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKI---ETKPCGEELKGGDKVLM 358
Query: 357 ECQGMGFVN 365
C G+GF N
Sbjct: 359 TCVGIGFSN 367
>POMBASE|SPAC12G12.06c [details] [associations]
symbol:SPAC12G12.06c "rRNA processing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004521
"endoribonuclease activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
PomBase:SPAC12G12.06c GO:GO:0005783 EMBL:CU329670 GO:GO:0005730
GO:GO:0004521 SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 PIR:S62537 RefSeq:NP_592892.1
ProteinModelPortal:Q09870 STRING:Q09870
EnsemblFungi:SPAC12G12.06c.1 GeneID:2542936 KEGG:spo:SPAC12G12.06c
OrthoDB:EOG4VQDZ2 NextBio:20803972 Uniprot:Q09870
Length = 363
Score = 232 (86.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 87/359 (24%), Positives = 160/359 (44%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQGR-LENAHIGS 79
G + L +V + L PI V I PG+ ++ L + + + G +E ++ G
Sbjct: 11 GCEYLTHRLVLATLSGTPIRVEGIYPDEADPGVKDYQVSFLRLLEKLTNGSVIEISYTG- 69
Query: 80 TEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
T I+ PGNI G D T + ++ L L LF+ + L + G T+++ +D
Sbjct: 70 TSFIYRPGNIIGGRVVHDCPTTKGIGYFLEPILILCLFAKTPTSLTLTGVTSSNEDIGVD 129
Query: 140 YYIHLWRPVFCHFFNFN--IDIHDVRRGFFPKGGGEVNVDVTPV--QYIRPIELTQRGEL 195
P F +++ ++RG P GGGEVN + PV + + PI L++ G +
Sbjct: 130 VLRTSVLPSLQKRFQVGDELELRILKRGSAPGGGGEVNF-LCPVIKESLPPIRLSEFGRV 188
Query: 196 TAVWGHAFVAGGVKMNTA--QTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSG 253
+ G +A +++ A + ++A L PD + I T D+ GN G
Sbjct: 189 FRIRG---IASSTRVSPAFANRLVESARGVLNPFIPD----VFIYTDVRRGDEC-GNSPG 240
Query: 254 --VYIFAATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIVMM 311
+ + A T+ G Y+ G +P + G AK+L + C D +TQ + M
Sbjct: 241 YSITLVAETNKGCSYAAEHCGEAGETPEDVGSFCAKKLLEVIESGGCVDPYTQPSTLTGM 300
Query: 312 ALA-KGTSRVRVGQISLHTRTAIHIAEL--MTSAKFNIIEHEDKSCIIECQGMGFVNKN 367
L+ + + + VGQ+ + ++ + + ++ + + ++ E E + C G G++N N
Sbjct: 301 LLSSEDVNTIVVGQLGITSQLVVFLRDVKALFNCEYRFKELESGQVEMSCLGKGYLNVN 359
>ZFIN|ZDB-GENE-040930-11 [details] [associations]
symbol:rcl1 "RNA terminal phosphate cyclase-like 1"
species:7955 "Danio rerio" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-040930-11
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 HOVERGEN:HBG014327 EMBL:AY648776 IPI:IPI00500893
RefSeq:NP_001003865.1 UniGene:Dr.31536 ProteinModelPortal:Q6DRI3
STRING:Q6DRI3 PRIDE:Q6DRI3 GeneID:445388 KEGG:dre:445388
NextBio:20832092 ArrayExpress:Q6DRI3 Bgee:Q6DRI3 Uniprot:Q6DRI3
Length = 367
Score = 231 (86.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 89/346 (25%), Positives = 146/346 (42%)
Query: 26 RMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLENAHIGSTEIIF 84
R +V S L +P+ + NIR+ PGL + + + + G R+E G+ ++F
Sbjct: 10 RQRLVLSTLSGKPVKIRNIRSKDDNPGLRDFEASFIRMLDKLTNGTRIEINQTGT--VLF 67
Query: 85 Y-PGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPIDYYIH 143
Y PG + G+ + SV ++ L L F + ++KG TN P +D
Sbjct: 68 YQPGLLYGGSVEHECNVQRSVGYYLEALLMLAPFMKTPIKAVLKGITNHPTDPSVDLLKV 127
Query: 144 LWRPVFCHF-FNFN-IDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQRGELTAVWGH 201
P+ F N + ++I V+RG P GGGEV+ + ++P++LT+ G++ + G
Sbjct: 128 TAVPLMKRFGINGDGLEIKVVKRGMAPGGGGEVHFSCPVSRSMKPVQLTEAGKIKRIRGT 187
Query: 202 AFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSGVYIFAATS 261
AF V A + D+A L K PD T + + G G+ + A T
Sbjct: 188 AFSVR-VSPQMANRIVDSARSILNKFIPDIYI---YTDHMKGPNSGKSPGFGLVLVAETL 243
Query: 262 TGARYSGGCNGSPRTS-----PGECGLNAAKELWSSLCENICFDEHTQDQLIVMMALAKG 316
G +P+ P + G N AK L + C D Q ++ M L +
Sbjct: 244 NGVFLGAEVVSTPQGQGEMQLPEDLGRNCAKLLLEEIYRGGCVDSTNQSLALLYMTLGQQ 303
Query: 317 -TSRVRVGQISLHTRTAI-HIAELMTSAKFNIIEHEDKSCIIECQG 360
S+ +G +S +T + HI + F I K EC+G
Sbjct: 304 EVSKTLLGPLSPYTMDFLRHIRDFF-QIMFKI--ETQKPSEDECKG 346
>WB|WBGene00022852 [details] [associations]
symbol:ZK1127.5 species:6239 "Caenorhabditis elegans"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0003824
GO:GO:0005730 GO:GO:0002119 GO:GO:0016246 GO:GO:0010171
GO:GO:0040011 GO:GO:0042254 GO:GO:0006396 GO:GO:0000910
GO:GO:0040035 SUPFAM:SSF55205 EMBL:FO081697 GO:GO:0007276
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
PIR:G88196 RefSeq:NP_495445.2 ProteinModelPortal:Q23400 SMR:Q23400
STRING:Q23400 PaxDb:Q23400 EnsemblMetazoa:ZK1127.5.1
EnsemblMetazoa:ZK1127.5.2 GeneID:174151 KEGG:cel:CELE_ZK1127.5
UCSC:ZK1127.5 CTD:174151 WormBase:ZK1127.5 InParanoid:Q23400
NextBio:882755 Uniprot:Q23400
Length = 379
Score = 219 (82.2 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 89/340 (26%), Positives = 144/340 (42%)
Query: 13 IDGSVLEGGG-QILRMAMVFSGLLHRPIHVFNIRAGRVKPGLA--AQHLNGLIVAKDICQ 69
+ LE G R+ + +S L RPI + NIR +PG+ L GL+ + +
Sbjct: 1 MSSETLEFSGCNFFRIRLAYSILSGRPIRIINIRKNDDRPGIRDFESKLIGLL--EKVTN 58
Query: 70 G-RLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKG 128
G ++E + G T++IF PG IT G D T ++ ++ L L F + +KG
Sbjct: 59 GTKVEISRTG-TQVIFRPGMITGGVVNLDCGTERCISYFLEPLLLLSPFCKVPMVIKLKG 117
Query: 129 GTNADMAPPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRP 186
TNA +D W V+ F + +DI RG P+GGG V V+ +RP
Sbjct: 118 VTNAPGEISVDGMKASWLKVYNKFVLNDEKLDIKIQARGLKPEGGGVVVFTAPIVKTLRP 177
Query: 187 IELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDK 246
++ Q G++ + G A+V V + A M D A K+ + + + IT Q D
Sbjct: 178 VKRQQVGKVCKIRGQAYVTK-VTPSLAYRMIDAAK----KAMHGYISDVYITVDQRKGDA 232
Query: 247 AIGN-GSGVYIFAATSTGARYSGGCNGSPRTSPG------ECGLNAAKELWSSLCENICF 299
+ G G+++ A T+ G Y P+ G + G+ A L +
Sbjct: 233 GGASPGYGLFLTAETTEGVIYQAEAISRPKGESGVPILPEDIGIEAGHALLQQIYMGGAL 292
Query: 300 DEHTQDQLIVMMALA-KGTSRVRVGQISLHTRTAI-HIAE 337
D Q M L K S G + +++ A+ H+ +
Sbjct: 293 DSSAQILASTFMTLCPKDVSHFLYGPLPMYSVHALRHLKQ 332
>ASPGD|ASPL0000067962 [details] [associations]
symbol:AN7762 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824
GO:GO:0006396 EMBL:BN001304 EMBL:AACD01000132 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 KO:K01974 RefSeq:XP_681031.1
ProteinModelPortal:Q5AVB8 EnsemblFungi:CADANIAT00000899
GeneID:2869654 KEGG:ani:AN7762.2 HOGENOM:HOG000173213 OMA:LIVAHTS
OrthoDB:EOG4B5SDN Uniprot:Q5AVB8
Length = 458
Score = 201 (75.8 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 57/173 (32%), Positives = 81/173 (46%)
Query: 9 DVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRV-KPGLAAQHLNGLIVAKDI 67
D + +DG LEGGGQ++R+A+ S L R + + ++R R K GL A HL + ++
Sbjct: 8 DPVRLDGRKLEGGGQLVRIAVALSALTGRAVVIDHVRGNRSGKRGLKASHLAAIKALGEL 67
Query: 68 CQGRLENAHIGSTEIIFYP-----GNI--TSGNFYADSKTAGSVTLIMQVALPLLLFSSG 120
L A +GS + FYP G TS + T GSV L+ Q P LL+S
Sbjct: 68 SGSTLVKAQVGSCSVGFYPPPQEQGRPPQTSSDINIRLPTPGSVFLVFQALYPYLLYSDS 127
Query: 121 QSQ--LIVKGGTNADMAPPIDYYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGG 171
Q L + GGTN +P DY + P F I + +RG+ G
Sbjct: 128 AEQIRLSIVGGTNVSSSPSYDYVSQVLIPNFARLGLPPISVRLEKRGWASSQG 180
Score = 54 (24.1 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 298 CFDEHTQDQLIVMMALAKGT---------SRVRVGQISLHTRTA 332
C DE+ +DQL++ AL + + SR SLHT+TA
Sbjct: 401 CVDEYMRDQLVIFEALGQASNNKDHQEYESREDEKYWSLHTKTA 444
>FB|FBgn0020909 [details] [associations]
symbol:Rtc1 "Rtc1" species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
GO:GO:0003824 GO:GO:0005730 EMBL:AE014298 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
EMBL:AY058762 EMBL:X04754 EMBL:M15898 RefSeq:NP_572919.1
UniGene:Dm.4106 ProteinModelPortal:P56175 SMR:P56175 STRING:P56175
PaxDb:P56175 EnsemblMetazoa:FBtr0073820 GeneID:32338
KEGG:dme:Dmel_CG11130 UCSC:CG11130-RA CTD:32338 FlyBase:FBgn0020909
InParanoid:P56175 OrthoDB:EOG4CZ8XB PhylomeDB:P56175
GenomeRNAi:32338 NextBio:777999 Bgee:P56175 GermOnline:CG11130
Uniprot:P56175
Length = 384
Score = 186 (70.5 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 81/361 (22%), Positives = 146/361 (40%)
Query: 8 PDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRA-GRVKPGLAAQHLNGLIVAKD 66
P + ++ G L+ ++ + L +P+ + IR+ PGL ++ + +
Sbjct: 2 PPIAQEGNCLIYRGSNFLKQRLILACLSGKPVKISQIRSEDETAPGLREYEISLIRLLDK 61
Query: 67 ICQGRLENAHIGSTEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIV 126
I G + T ++F PG + G D + + + L F Q +
Sbjct: 62 ITNGTKIELNPAGTSVMFSPGLLHGGQLNHDCCVQRGIGYYLDALIALGPFCKSPLQCTL 121
Query: 127 KGGTNADMAPPIDYYIHLWRPVFCHFF--NFNIDIHDVRRGFFPKGGGEVNVDVTPVQY- 183
+G TN+ +P +D+ + F + +++ VRRG P GGGE+ + PV+
Sbjct: 122 RGVTNSKDSPSVDHIKGAALSLLKRFLLVDEGLELKVVRRGVAPLGGGEI-IFRCPVRKS 180
Query: 184 IRPIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLS 243
+R I+ +G + + G + A V A + A ++K PD + I T Q +
Sbjct: 181 LRAIQFQSQGMVKRIRGTVY-ACKVSPAMANRTVEAAKGCMLKFLPD----VYIYTDQ-N 234
Query: 244 SDKAIGN--GSGVYIFAATSTGARYSGGCNGSPRTS-------PGECGLNAAKELWSSLC 294
K GN G G+ + A T+ G ++ C + R P G A L +
Sbjct: 235 KGKMSGNSPGFGICLIAETTDGVCFAADCCSNTREESEDTPSIPENLGKEVALRLLDEIY 294
Query: 295 ENICFDEHTQDQLIVMMALA-KGTSRVRVGQISLHTRTAI-HIAELMT-SAKFNIIEHED 351
C D Q + +AL K S+ G +S +T + H+ + + + K E ED
Sbjct: 295 RGGCVDSSYQWLAALYIALGQKHVSKFLTGALSNYTVHFLQHLRDFFSITFKLENPEAED 354
Query: 352 K 352
+
Sbjct: 355 E 355
>TAIR|locus:504956443 [details] [associations]
symbol:AT5G22100 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL589883 EMBL:BT002059 IPI:IPI00532522
RefSeq:NP_680196.1 UniGene:At.44338 UniGene:At.45633
ProteinModelPortal:Q9C578 SMR:Q9C578 STRING:Q9C578 PaxDb:Q9C578
PRIDE:Q9C578 EnsemblPlants:AT5G22100.1 GeneID:832271
KEGG:ath:AT5G22100 TAIR:At5g22100 eggNOG:COG0430
HOGENOM:HOG000157670 InParanoid:Q9C578 KO:K11108 OMA:FMKHPLR
PhylomeDB:Q9C578 ProtClustDB:CLSN2690185 Genevestigator:Q9C578
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 Uniprot:Q9C578
Length = 375
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 89/370 (24%), Positives = 145/370 (39%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQGRLENAHIGST 80
G Q R ++ S L PI + IRA PGL +N L + + + + + + T
Sbjct: 9 GSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDINETGT 68
Query: 81 EIIFYPGNITSG-NFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
+ + PG I G N + S+ ++ L L LF + +KG TN P D
Sbjct: 69 RLKYKPGTIVGGKNLVHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITN----DPRD 124
Query: 140 YYIHLWRPVFCHFFN-FNIDIHDVR-----RGFFPKGGGEVNVDVTPVQYIRPIELTQRG 193
+ +R + F + D+ RG P GGGEV + V ++ + + + G
Sbjct: 125 ASVDTFRSTTLNIIKRFGVPAEDLELKIEARGVAPNGGGEVLLTVPNIKTLSAVHWVEEG 184
Query: 194 ELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSG 253
+ + G F + V + +M A PD ++ + G G
Sbjct: 185 MVKKIRGTTF-STRVTSDFEHSMRFAARGIFNNLLPDVHI---FQDHRAGAQAGKSPGYG 240
Query: 254 VYIFAATSTGARYSG----GCNGSPRT----------SPGE-CGLNAAKELWSSLCENIC 298
+ + A T+TG S C T SP E G+ A L + +
Sbjct: 241 ISLAAETTTGCFISADTTVSCERPDETGELDVEKKERSPAEDTGVEVASWLLQEIEKGGV 300
Query: 299 FDEHTQDQLIVMMALAK-GTSRVRVGQISLHT-RTAIHIAELMTSAKFNIIEHE-DKSCI 355
D Q L ++ AL++ S+VRVG +S + T +I E + KF I + I
Sbjct: 301 VDSTHQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFL-GVKFAIKPDPLTGTVI 359
Query: 356 IECQGMGFVN 365
++C G G +N
Sbjct: 360 LKCTGSGLIN 369
>SGD|S000005370 [details] [associations]
symbol:RCL1 "Endonuclease that cleaves pre-rRNA at site A2
for 18S rRNA biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0008047
"enzyme activator activity" evidence=IDA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
SGD:S000005370 GO:GO:0005730 EMBL:BK006948 GO:GO:0004521
GO:GO:0008047 SUPFAM:SSF55205 GO:GO:0030686 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
GeneTree:ENSGT00530000063404 OrthoDB:EOG4VQDZ2 EMBL:Z74752
PIR:S66692 RefSeq:NP_014633.1 ProteinModelPortal:Q08096 SMR:Q08096
DIP:DIP-4539N IntAct:Q08096 MINT:MINT-566090 STRING:Q08096
PaxDb:Q08096 PeptideAtlas:Q08096 EnsemblFungi:YOL010W GeneID:854152
KEGG:sce:YOL010W CYGD:YOL010w NextBio:975908 Genevestigator:Q08096
GermOnline:YOL010W Uniprot:Q08096
Length = 367
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 84/356 (23%), Positives = 155/356 (43%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQGR-LENAHIGS 79
G Q R+ +V + L +PI + IR+G + PGL ++ L + + + G +E ++ G+
Sbjct: 13 GSQNFRLRIVLATLSGKPIKIEKIRSGDLNPGLKDYEVSFLRLIESVTNGSVIEISYTGT 72
Query: 80 TEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTNADMAPPID 139
T +I+ PG I G ++ V ++ L L FS + ++ KG T + I+
Sbjct: 73 T-VIYRPGIIVGGASTHICPSSKPVGYFVEPMLYLAPFSKKKFSILFKGITASHNDAGIE 131
Query: 140 YYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGGGEVNVDVTPVQYIRPIELTQ--RGELTA 197
PV F +H ++RG P GGGEV++ V + +PI + + R +++
Sbjct: 132 AIKWGLMPVMEKFGVRECALHTLKRGSPPLGGGEVHLVVDSL-IAQPITMHEIDRPIISS 190
Query: 198 VWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITT-YQLSSDKAIGNGSGVYI 256
+ G A+ + V + M D A L + + ++ IT + G G+ +
Sbjct: 191 ITGVAY-STRVSPSLVNRMIDGAKKVL----KNLQCEVNITADVWRGENSGKSPGWGITL 245
Query: 257 FAATST-GARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIVMMALAK 315
A + G Y G + P E G A +L + ++ + IV M + K
Sbjct: 246 VAQSKQKGWSYFAEDIGDAGSIPEELGEKVACQLLEEISKSAAVGRNQLPLAIVYMVIGK 305
Query: 316 -GTSRVRVGQISLHTRTAI---HIAELMTSAKF--NIIEHEDKSCIIECQGMGFVN 365
R+R+ + + R I I ++ + F + E +++ I +G+GF N
Sbjct: 306 EDIGRLRINKEQIDERFIILLRDIKKIFNTEVFLKPVDEADNEDMIATIKGIGFTN 361
>CGD|CAL0001795 [details] [associations]
symbol:RCL1 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0004521
"endoribonuclease activity" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 CGD:CAL0001795 GO:GO:0003824
GO:GO:0005730 GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AACQ01000133 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_713143.1 ProteinModelPortal:Q59U65
STRING:Q59U65 GeneID:3645199 KEGG:cal:CaO19.1886 Uniprot:Q59U65
Length = 371
Score = 178 (67.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 84/357 (23%), Positives = 155/357 (43%)
Query: 21 GGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGLAAQHLNGLIVAKDICQG-RLENAHIGS 79
G + R+ +V + L +PI + IR+ + PGL ++ L + + + G +E ++ G+
Sbjct: 14 GHRNFRLRLVLATLSGKPIKITKIRSQDLNPGLKDHEVSFLRLLEAVTNGSHIEISYTGT 73
Query: 80 TEIIFYPGNITSGNFYADSKTAGSVTLIMQVALPLLLFSSGQSQLIVKGGTN-ADMAPPI 138
T II+ PG I G+ + S+ ++ L L FS + +I KG TN A +
Sbjct: 74 T-IIYRPGIIIGGDLTHNCPDTKSIGYFIEPMLMLAPFSKKKFSIIFKGLTNIAGNDTGV 132
Query: 139 DYYIHLWRPVFCHFFNFNIDIHDVRRGFFPKGGGEVNVDVTP-VQYIRPIELTQRGELTA 197
D PV F + +H ++RG P GGGEV++ + + I + +A
Sbjct: 133 DAIKWGLLPVMEKFGVREVSLHILKRGSAPLGGGEVHLLCSSLIPQPLTIHALDIPKFSA 192
Query: 198 VWGHAFVAGGVKMNTAQTMADTAYDYLVKSYPDFKTKLKITTYQLSSDKAIGNGSGVYIF 257
+ G A+ V + M D+A L + + + + +S K+ G G+ +
Sbjct: 193 IRGVAYCTR-VSPSIVNRMIDSARAVLKPTGCEVNITADVWRGE-NSGKS--PGFGITLV 248
Query: 258 AATSTGARYSGGCNGSPRTSPGECGLNAAKELWSSLCENICFDEHTQDQLIVMMALAK-- 315
A + G R GS + P + G A +L + + + +V M + K
Sbjct: 249 AESKRGWRIVTENVGSAGSLPEDSGELTAYQLLEEISNSGVVGRYQLPLALVYMTIGKED 308
Query: 316 -GTSRVRVGQISLHTRTAIH-IAELM-TSAKFNI----IEHEDKSCIIECQGMGFVN 365
G +++ +I + + + I E+ T A F ++ +DK + +G+GF N
Sbjct: 309 IGRLKIQKSEIDENLVSVLRDIQEVFGTEAFFKDDAEELDSDDKFMTVSIKGVGFTN 365
>UNIPROTKB|Q5VZU3 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 EMBL:AL158147
UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1 HOGENOM:HOG000110352
HOVERGEN:HBG054967 IPI:IPI00647354 SMR:Q5VZU3
Ensembl:ENST00000442869 Uniprot:Q5VZU3
Length = 182
Score = 133 (51.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/169 (27%), Positives = 76/169 (44%)
Query: 168 PKGGGEVNVDVTPVQYI-RPIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLVK 226
P GGGEV V PV+ + +PI+LT G++ + G A+ V A + D+A L K
Sbjct: 3 PGGGGEV-VFSCPVRKVLKPIQLTDPGKIKRIRGMAYSVR-VSPQMANRIVDSARSILNK 60
Query: 227 SYPDFKTKLKITTYQLSSDKAIGNGSGVYIFAATSTGARYSGGCNGSPRTS-----PGEC 281
PD T + + G G+ + A T++G S +P+ P +
Sbjct: 61 FIPDIYI---YTDHMKGVNSGKSPGFGLSLVAETTSGTFLSAELASNPQGQGAAVLPEDL 117
Query: 282 GLNAAKELWSSLCENICFDEHTQDQLIVMMALAK-GTSRVRVGQISLHT 329
G N A+ L + C D Q +++M L + S+V +G +S +T
Sbjct: 118 GRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYT 166
>UNIPROTKB|A6NIC1 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9606 "Homo sapiens" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL445928 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 EMBL:AL663111 UniGene:Hs.484222
HGNC:HGNC:17981 ChiTaRS:RTCA IPI:IPI00647050
ProteinModelPortal:A6NIC1 SMR:A6NIC1 STRING:A6NIC1
Ensembl:ENST00000370126 HOGENOM:HOG000293289 ArrayExpress:A6NIC1
Bgee:A6NIC1 Uniprot:A6NIC1
Length = 49
Score = 125 (49.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 7 GPDVLNIDGSVLEGGGQILRMAMVFSGLLHRPIHVFNIRAGRVKPGL 53
GP V +DGS++EGGGQILR++ S LL P+ V IRAGR PGL
Sbjct: 3 GPRV-EVDGSIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGL 48
>ASPGD|ASPL0000041674 [details] [associations]
symbol:AN1474 species:162425 "Emericella nidulans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 EMBL:BN001307
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:AACD01000022
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
RefSeq:XP_659078.1 STRING:Q5BDA6 EnsemblFungi:CADANIAT00008091
GeneID:2875217 KEGG:ani:AN1474.2 OrthoDB:EOG41ZJKD Uniprot:Q5BDA6
Length = 403
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 75/283 (26%), Positives = 122/283 (43%)
Query: 113 PLLLFSSGQSQLIVKGGTNADMAPPIDYYIHLWRPVFCHF--FNFNIDIHDVRRGFF-PK 169
P+ + +G +I DM+ +D P+F F FN NI++ +RR P
Sbjct: 126 PIKVLFTGPG-VITSSTPTGDMS--VDSVRTAILPLFNQFGIFN-NIELRVLRRSNLGPN 181
Query: 170 G---GGEVN-VDVTPVQYIRPIELTQRGELTAVWGHAFVAGGVKMNTAQTMADTAYDYLV 225
G GGEV V V+ + + L G + V G A+ G N A+ M DT L
Sbjct: 182 GRGGGGEVQLVFGHQVRLPKTLHLMNAGRIKRVRGVAYSVGVSASNNAR-MIDTCRGVLN 240
Query: 226 KSYPDFKTKLKITTYQL---------SSDKAIGNGSGVYIFAATSTGARYSG--GCNGSP 274
PD +++ L S+ K IG G G+ + A +STG +S C S
Sbjct: 241 PLVPDTYIFSDVSSAPLVPAPERNNPSAKKKIGLGFGLSLVAESSTGCLFSADVACPPSG 300
Query: 275 RTSPGECGLNAAKELWSSLCENICFDEHTQDQLIVMMAL-AKGTSRVRVGQISLHTRTAI 333
P + G A +L ++ + C +I +M + ++ R++VG+ + ++I
Sbjct: 301 GQPPEDIGKQCAYQLLETISKGGCVAPAAFPIMIGLMTMGSEDVGRIQVGRDIIGDESSI 360
Query: 334 HIA-ELMT--SAKFNIIEHEDKS--CIIECQGMGFVNKNWGRK 371
+A +LM + + + + D+S II G G N GRK
Sbjct: 361 QLARDLMKFGAPGWGLRDAGDESNDVIISVVGRGIGNV--GRK 401
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 374 374 0.00087 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 617 (66 KB)
Total size of DFA: 250 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.35u 0.08s 27.43t Elapsed: 00:00:03
Total cpu time: 27.36u 0.08s 27.44t Elapsed: 00:00:03
Start: Thu Aug 15 11:51:38 2013 End: Thu Aug 15 11:51:41 2013