BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2633
(764 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383859589|ref|XP_003705276.1| PREDICTED: FACT complex subunit Ssrp1-like [Megachile rotundata]
Length = 740
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/765 (61%), Positives = 576/765 (75%), Gaps = 46/765 (6%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYTDVLAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFTQNYKKDMLEKELSLKGWNWGTARFNGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ + D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSD-SVDQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLP 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPTYEVM K+MKVI+NRK+T PG+F H+GT A++CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTYEVMGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED-EDESTDEDFNPD 483
RVKN GK +K NY DFG SD E EPDAYLARVK EA ERD ED++D E+ESTDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERDAEDNQDSEEESTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDAS-----EGTKKKKKEKSRKTITISEKPRKSKKDKE 538
Q ESDVAEEYDSNP ++S+ DSDAS + K+KK++K + T+SEKPRK
Sbjct: 483 QDESDVAEEYDSNPNSSESENDSDASGKSEKKEKKEKKEKKPKSAKTVSEKPRKP----- 537
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
++K++D N PK+P +A+M+W N REKIK DNPGI+ TEIAKKGGE+W+ + K
Sbjct: 538 ----RKQKKERDANKPKRPPTAFMIWLNSNREKIKADNPGIAVTEIAKKGGEMWREL--K 591
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD------DGKTSKSKKPAKKKETASTAV 652
+K+E+++K KAK++Y ++K Y+ SGGGQ KT K++K KKK V
Sbjct: 592 DKSEWEQKAAKAKKEYAASMKEYEASGGGQKDKKEKADKSEKTDKAEKSEKKKVDTKKEV 651
Query: 653 SPH--KVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGES 710
P KSKE+I + SSSD D K K+ SDED +E D G+
Sbjct: 652 KPATGSFKSKEYISEDESSSDEDTKK----SEKKHSDED-------------TEPDKGKK 694
Query: 711 EKEKKSKSKPKGDKSKSKSKKEDEIDDEEYDEPVESTPPSSDAGS 755
+K+S K K DE DE EPVESTPPSSDA S
Sbjct: 695 RGDKRSAEDDDKKAKKEKKSDSDEGSDE---EPVESTPPSSDAES 736
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/671 (63%), Positives = 531/671 (79%), Gaps = 25/671 (3%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ ++S+E +G + GKLK+TDQNI+FKN KTGKVE I+ D + VN+Q G+ +R+
Sbjct: 4 LEYSDISAEVKGCMTGGKLKMTDQNIIFKNSKTGKVESISASDFEAVNFQNFAGSLGIRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFK+ E ++I FF +KID+ EKELS++GWNWG KF G+VLSF+V
Sbjct: 64 FLKNGTLHRFVGFKDAEKERIAKFFSNTYKIDMLEKELSLKGWNWGTAKFNGSVLSFEVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ +AFEIPL VSQCT GKNE+T+EFH ND+A SL+EMRF+IP+NE+AGD DPVEAF+
Sbjct: 124 HNSAFEIPLNHVSQCTAGKNEITMEFHQNDDAPVSLMEMRFFIPSNELAGDVDPVEAFQK 183
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF +FFQLHGKTFDYKIP+STVLR+F
Sbjct: 184 QVMKKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSTVLRLF 243
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ FFV+SLDPPIKQGQTRYHFL LLF Q+E + +ELPF+++ELK+KYEGKLD
Sbjct: 244 LLPHKDNRQMFFVVSLDPPIKQGQTRYHFLVLLFGQEEETSIELPFTDEELKDKYEGKLD 303
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPTYEV+ K+MKVI+NRK+T PG F GH+GT A+ CS+KAAAGY+YPLERGF+++H
Sbjct: 304 KELSGPTYEVLGKVMKVIINRKLTGPGGFVGHSGTPAIGCSFKAAAGYLYPLERGFMYVH 363
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEE+A+VNFAR GGSTRSFDFEIELKSG +HTFSSIEKEEY KLFDFI KKL
Sbjct: 364 KPPIHIRFEEVASVNFARGGGSTRSFDFEIELKSGTVHTFSSIEKEEYNKLFDFITTKKL 423
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDE--DEDESTDEDFNP 482
+KN GK +K Y +DFG SD+E PDAYL RVK EA ERD++DD+ EDESTDEDF P
Sbjct: 424 NIKNRGKNDKGGYNDDFGDSDNEAAPDAYLERVKAEAQERDEDDDDGPSEDESTDEDFKP 483
Query: 483 DQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTI---------TISEKPRKS 533
Q ESDVAEE+DS+P+ + S ED + G + KKK K K T+SEKPR+
Sbjct: 484 TQDESDVAEEFDSSPS-STSSEDEEKGSGDEHKKKHKKEKKEKKEKKKPAKTVSEKPRQK 542
Query: 534 KKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWK 593
+ +K KD+N PK+P +A+M+W N+MR+KIK DNPGI TEIAKKGGE+WK
Sbjct: 543 RA----------KKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWK 592
Query: 594 TVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVS 653
+ K+K+E++ K KAKE+YN+A+K Y E+ GG S+D K+S+ K PAKKK ++ +V
Sbjct: 593 EL--KDKSEWEGKAAKAKEEYNKAMKEY-EASGGSKSEDKKSSEKKAPAKKKTSSMPSVK 649
Query: 654 PHKVKSKEFIE 664
P +VKS+EFIE
Sbjct: 650 PSQVKSREFIE 660
>gi|350409390|ref|XP_003488719.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus impatiens]
Length = 736
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/759 (61%), Positives = 579/759 (76%), Gaps = 38/759 (5%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYTDVIAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFLQNYKKDMLEKELSLKGWNWGTARFNGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ A D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPISDSA-DQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLP 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPTYEV+ K+MKVI+NRK+T PG+F H+GT A++CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTYEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED-EDESTDEDFNPD 483
RVKN GK +K NY DFG SD E EPDAYLARVK EA ERD E+++D E+ESTDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERDAEENQDSEEESTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGS 543
Q ESDVAEEYDSNP ++S+ +SDAS ++KK+K++ R+ S K ++
Sbjct: 483 QDESDVAEEYDSNPNSSESENESDASGKSQKKEKKEKREKKAKSAK----TVSEKPRKPR 538
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
++K+KD N PK+P +A+M+W N RE+IK +NPGI+ TEIAKKGGE+W+ + K+K+E+
Sbjct: 539 KQKKEKDANKPKRPPTAFMIWLNSARERIKAENPGIAVTEIAKKGGEMWREL--KDKSEW 596
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKV------ 657
++K KAK++Y ++K Y+ SGGG D K S+ K+ +KK S SP K+
Sbjct: 597 EQKAAKAKKEYTASMKEYEASGGGA-GDKEKISEKKEKGEKKRKESKKESPSKLMTGTSF 655
Query: 658 KSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEKKSK 717
KSKE+I + SSSD D+ K K+ SDED SD G KEKKS
Sbjct: 656 KSKEYISDDESSSDEDNKK----SEKKASDED---------------SDGG---KEKKSG 693
Query: 718 SKPKGDKSKSKSKKEDEIDDEEYD-EPVESTPPSSDAGS 755
K + K KK+ + + E D EP+ESTPPSS+A S
Sbjct: 694 DKRSAEDDDKKLKKKRKEESEGSDEEPIESTPPSSEAES 732
>gi|340713595|ref|XP_003395326.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus terrestris]
Length = 735
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/762 (60%), Positives = 580/762 (76%), Gaps = 45/762 (5%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYTDVIAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFLQNYKKDMLEKELSLKGWNWGTARFNGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ + D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPISD-SVDQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLP 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPTYEV+ K+MKVI+NRK+T PG+F H+GT A++CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTYEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED-EDESTDEDFNPD 483
RVKN GK +K NY DFG SD E EPDAYLARVK EA ERD E+++D E+ESTDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERDAEENQDSEEESTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTI-----TISEKPRKSKKDKE 538
Q ESDVAEEYDSNP ++S+ +SDAS ++KK+K++ ++ T+SEKPRK
Sbjct: 483 QDESDVAEEYDSNPNSSESENESDASGKSQKKEKKEKKEKKPKSAKTVSEKPRKP----- 537
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
++K+KD N PK+P +A+M+W N RE+IK +NPGI+ TEIAKKGGE+W+ + K
Sbjct: 538 ----RKQKKEKDANKPKRPPTAFMIWLNSARERIKAENPGIAVTEIAKKGGEMWREL--K 591
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST----AVSP 654
+K+E+++K KAK++Y ++K Y+ SGGG D + K K KKKE+ ++
Sbjct: 592 DKSEWEQKAAKAKKEYTASMKEYEASGGGGDKEKISEKKEKGEKKKKESKKESPSKLMTG 651
Query: 655 HKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEK 714
KSKE+I + SSSD D+ K K+ +DED SD G KEK
Sbjct: 652 TSFKSKEYISDDESSSDEDNKK----LEKKATDED---------------SDGG---KEK 689
Query: 715 KSKSKPKGDKSKSKSKKEDEIDDEEYD-EPVESTPPSSDAGS 755
KS K + K KK+ + + E D EP+ESTPPSS+A S
Sbjct: 690 KSGDKRSAEDDDKKLKKKRKEESEGSDEEPIESTPPSSEAES 731
>gi|110766132|ref|XP_001120264.1| PREDICTED: FACT complex subunit Ssrp1 [Apis mellifera]
Length = 728
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/755 (62%), Positives = 583/755 (77%), Gaps = 42/755 (5%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYTDVIAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISATDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFTQNYKKDMLEKELSLKGWNWGTARFNGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ A D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSDSA-DQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLP 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPT+EV+ K+MKVI+NRK+T PG+F H+GT A++CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTFEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED-EDESTDEDFNPD 483
RVKN GK +K NY DFG SD E EPDAYLARVK EA ERD E+++D E+ESTDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAEERDAEENQDSEEESTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDAS-----EGTKKKKKEKSRKTITISEKPRKSKKDKE 538
Q ESDVAEEYDSNP ++S+ DSD S + K+KK++KS+ T+SEKPRK
Sbjct: 483 QDESDVAEEYDSNPNSSESENDSDVSGKSQKKEKKEKKEKKSKSAKTVSEKPRKP----- 537
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
++K+KD N PK+P +A+MMW N RE+IK +NPGI+ TEIAKKGGE+W+ + K
Sbjct: 538 ----RKQKKEKDTNKPKRPPTAFMMWLNSARERIKAENPGIAVTEIAKKGGEMWREL--K 591
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVK 658
+K+E+++K KAK+DY+ ++K Y+ SGG D + + KK KKE+ + +S K
Sbjct: 592 DKSEWEQKAAKAKKDYSASMKEYEASGG--QKDKKEKGEKKKKENKKESPNKLMSGTSFK 649
Query: 659 SKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEKKSKS 718
SKE+I + SSSD D+ K K+ SDEDS+ K KKK +K +E D + +K KK +S
Sbjct: 650 SKEYISDDESSSDEDNKK----SEKKGSDEDSE-KEKKKGDKRTAEDDDKKVKKGKKEQS 704
Query: 719 KPKGDKSKSKSKKEDEIDDEEYDEPVESTPPSSDA 753
DE D DEP+ESTPPSS+A
Sbjct: 705 --------------DEGSD---DEPIESTPPSSEA 722
>gi|380011419|ref|XP_003689803.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit Ssrp1-like
[Apis florea]
Length = 729
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/750 (61%), Positives = 573/750 (76%), Gaps = 31/750 (4%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYTDVIAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISATDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFTQNYKKDMLEKELSLKGWNWGTARFNGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ A D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSDSA-DQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLP 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPT+EV+ K+MKVI+NRK+T PG+F H+GT A++CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTFEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED-EDESTDEDFNPD 483
RVKN GK +K NY DFG SD E EPDAYLARVK EA ERD E+++D E+ESTDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAEERDAEENQDSEEESTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGS 543
Q ESDVAEEYDSNP ++S+ DSD S G +KK++K +K S+K ++
Sbjct: 483 QDESDVAEEYDSNPNSSESENDSDVS-GKSQKKEKKEKKEKKSKSAKTVSEKPRKPR--- 538
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
+K+KD N PK+P +A+MMW N RE+IK +NPGI+ TEIAKKGGE+W+ + K+K+E+
Sbjct: 539 KXKKEKDANKPKRPPTAFMMWLNSARERIKAENPGIAVTEIAKKGGEMWREL--KDKSEW 596
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFI 663
++K KAK+DY+ ++K Y+ SGGGQ K K KK KKE+ + +S KSKE+I
Sbjct: 597 EQKAAKAKKDYSASMKEYEASGGGQKDKKEKGEKKKK-KXKKESPNKLMSGTSFKSKEYI 655
Query: 664 ESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEKKSKSKPKGD 723
+ SSSD D+ K K+ SDEDS + KK +K++
Sbjct: 656 SDDESSSDEDNKK----SEKKGSDEDSDKEKKK---------------GDKRTAEDDDKK 696
Query: 724 KSKSKSKKEDEIDDEEYDEPVESTPPSSDA 753
K K ++ DE D DEP+ESTPPSS+A
Sbjct: 697 VKKGKKEESDEGSD---DEPIESTPPSSEA 723
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/655 (64%), Positives = 520/655 (79%), Gaps = 25/655 (3%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GKLK+TDQNI+FKN KTGKVE I+ D + VN+Q G+ +R+FLKNG+LHRF GFK+
Sbjct: 148 GKLKMTDQNIIFKNSKTGKVESISASDFEAVNFQNFAGSLGIRVFLKNGTLHRFVGFKDA 207
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
E ++I FF +KID+ EKELS++GWNWG KF G+VLSF+V + +AFEIPL VSQCT
Sbjct: 208 EKERIAKFFSNTYKIDMLEKELSLKGWNWGTAKFNGSVLSFEVGHNSAFEIPLNHVSQCT 267
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAI 200
GKNE+T+EFH ND+A SL+EMRF+IP+NE+AGD DPVEAF+ VM +ASVI+ +GDAI
Sbjct: 268 AGKNEITMEFHQNDDAPVSLMEMRFFIPSNELAGDVDPVEAFQKQVMKKASVISVSGDAI 327
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
A+F EIQCLTPRGRYDIKIF +FFQLHGKTFDYKIP+STVLR+F LPHKD RQ FFV+SL
Sbjct: 328 AIFREIQCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSL 387
Query: 261 DPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMK 320
DPPIKQGQTRYHFL LLF Q+E + +ELPF+++ELK+KYEGKLDKELSGPTYEV+ K+MK
Sbjct: 388 DPPIKQGQTRYHFLVLLFGQEEETSIELPFTDEELKDKYEGKLDKELSGPTYEVLGKVMK 447
Query: 321 VIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNF 380
VI+NRK+T PG F GH+GT A+ CS+KAAAGY+YPLERGF+++HKPPIHIRFEE+A+VNF
Sbjct: 448 VIINRKLTGPGGFVGHSGTPAIGCSFKAAAGYLYPLERGFMYVHKPPIHIRFEEVASVNF 507
Query: 381 ARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKED 440
AR GGSTRSFDFEIELKSG +HTFSSIEKEEY KLFDFI KKL +KN GK +K Y +D
Sbjct: 508 ARGGGSTRSFDFEIELKSGTVHTFSSIEKEEYNKLFDFITTKKLNIKNRGKNDKGGYNDD 567
Query: 441 FGSSDDEKEPDAYLARVKREAAERDDEDDE--DEDESTDEDFNPDQAESDVAEEYDSNPT 498
FG SD+E PDAYL RVK EA ERD++DD+ EDESTDEDF P Q ESDVAEE+DS+P+
Sbjct: 568 FGDSDNEAAPDAYLERVKAEAQERDEDDDDGPSEDESTDEDFKPTQDESDVAEEFDSSPS 627
Query: 499 PTDSDEDSDASEGTKKKKKEKSRKTI---------TISEKPRKSKKDKESSGGSTKRKKK 549
+ S ED + G + KKK K K T+SEKPR+ + +K K
Sbjct: 628 -STSSEDEEKGSGDEHKKKHKKEKKEKKEKKKPAKTVSEKPRQKRA----------KKSK 676
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D+N PK+P +A+M+W N+MR+KIK DNPGI TEIAKKGGE+WK + K+K+E++ K K
Sbjct: 677 DENKPKRPSTAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWKEL--KDKSEWEGKAAK 734
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIE 664
AKE+YN+A+K Y E+ GG S+D K+S+ K PAKKK ++ +V P +VKS+EFIE
Sbjct: 735 AKEEYNKAMKEY-EASGGSKSEDKKSSEKKAPAKKKTSSMPSVKPSQVKSREFIE 788
>gi|253314412|ref|NP_001156579.1| structure specific recognition protein-like [Acyrthosiphon pisum]
Length = 755
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/663 (64%), Positives = 534/663 (80%), Gaps = 5/663 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEFQ+V +E +G +C G+LK T+QNIVFKN KTGKVEQ+ D++FVNWQKLVGT +RI
Sbjct: 3 LEFQDVRAEVKGIMCTGRLKFTEQNIVFKNVKTGKVEQLTSSDIEFVNWQKLVGTCGIRI 62
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHR++GF E++ DKI +FK +++D+ EKEL+++GWNWG TKF G++LSFD+
Sbjct: 63 FLKNGNLHRYSGFNESDQDKIAKYFKNTYRLDMLEKELAIKGWNWGSTKFNGSILSFDIG 122
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N TAFEIPL +VSQCTTGKNEVT+EFH NDE SL EMRF+IP+ E+AGD DPV+AF D
Sbjct: 123 NLTAFEIPLNNVSQCTTGKNEVTLEFHQNDETPVSLCEMRFHIPSAELAGDQDPVDAFHD 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM QASVI+ +GDAIA+F E+QCLTPRGRYDIK+F +FFQLHGKTFDYKIP++TVLR+F
Sbjct: 183 QVMKQASVISISGDAIAIFREMQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMTTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKDGRQ FFV+SLDPPIKQGQTRYH+L LLFN +E + +ELPF+++E++ KY GKL
Sbjct: 243 ILPHKDGRQIFFVVSLDPPIKQGQTRYHYLVLLFNMEEETSIELPFTDEEIEAKYAGKLT 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KE+SGPTY V+A++MK IVNRKIT P SF+GH+GTSA+ CSYKAAAGY+YPLERGFI+IH
Sbjct: 303 KEISGPTYGVLAQVMKAIVNRKITTPASFKGHSGTSAIGCSYKAAAGYVYPLERGFIYIH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEI++VNFAR GGSTRSFDFEIELK+GV+HTFSSIEKEEYG L+DFI KKL
Sbjct: 363 KPPIHIRFEEISSVNFARGGGSTRSFDFEIELKNGVIHTFSSIEKEEYGSLYDFINAKKL 422
Query: 425 RVKNTGKGEKPNYK-EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPD 483
RVKNTGK +KP Y +D+G SD E EPDAYLARVKRE ERD++DD+D DESTDEDFNP+
Sbjct: 423 RVKNTGKSDKPAYTGDDYGDSDKEAEPDAYLARVKREGQERDEDDDDDSDESTDEDFNPE 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGS 543
ESDVAEE+DSNP+ T+S+ ++ KK++ ++ +KP+ +K E S
Sbjct: 483 GQESDVAEEFDSNPSTTESESGNEEG--GGGDKKKEKKEKKKKDKKPKSAKTISEKPRKS 540
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
K KK D PK+ +AYM+WFN+ RE+IK DNPGISF +IAKKGGELWK +S+ +K++Y
Sbjct: 541 KKSKKPDDGRPKRAATAYMIWFNEAREEIKSDNPGISFVDIAKKGGELWKKMSTSDKSKY 600
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQD--SDDGKTSKSKKPAKKKETASTAVSPHKVKSKE 661
+EK K+KE+Y EA+K +KESGGG + D ++ KS K ++ +T V SKE
Sbjct: 601 EEKAAKSKEEYIEAMKEFKESGGGAESFKDSKESKKSSKKFSSQKKVATPVKSGSFISKE 660
Query: 662 FIE 664
FIE
Sbjct: 661 FIE 663
>gi|307204835|gb|EFN83393.1| FACT complex subunit Ssrp1 [Harpegnathos saltator]
Length = 737
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/747 (60%), Positives = 568/747 (76%), Gaps = 25/747 (3%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ ++ +E +GA+ PGKLK+TDQ+++FK++KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYPDIVAEVKGAMTPGKLKLTDQHLIFKSQKTGKVEQISASDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K + EKELS++GWNWG KF G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEADQEKIAKFFSVNYKKETLEKELSLKGWNWGTAKFTGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ A D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSDSA-DQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EI CLTPRGRYDIKIF +FFQLHGKTFDYKIP+S VLR+F
Sbjct: 183 QVMEKASVISVSGDAIAIFKEIYCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSAVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ +FV+SLDPPIKQGQTRYH+L LLF Q+E + +ELPF+E+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFKQEEETFIELPFTEKELKEKYEDKLT 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KEL+GPTYEV+ K+MKVI+NRK+T PG F GHTGT A+ CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELAGPTYEVLGKVMKVIINRKLTGPGHFTGHTGTPAIGCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITLKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDE-STDEDFNPD 483
RVKN GK +K NY +DFG SD E EPDAYLARVK EA ERD E+++D +E STDEDFNP+
Sbjct: 423 RVKNRGKSDKLNYDQDFGDSDQEDEPDAYLARVKAEAQERDGEENQDSEEGSTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGS 543
Q ESDVAEEYDSNP +DS EDSDAS + KK+K++ ++ + ++
Sbjct: 483 QDESDVAEEYDSNPNSSDSGEDSDASAASHKKEKKEKKE----KKSKSAKTVPEKPRKPR 538
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
+K+KD N PK+P +A+M+W N+ RE IK DNPGI+ TEIAKKGGE+W+ + K+K E+
Sbjct: 539 KSKKEKDTNKPKRPPTAFMLWLNNARESIKADNPGIAVTEIAKKGGEMWREL--KDKPEW 596
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQDSD-DGKTSKSKKPAKKKETASTAVSPHKVKSKEF 662
+ K KAKE+Y ++K Y+ SGG + D K KK KK++ S +S KSKE+
Sbjct: 597 EAKAAKAKEEYMMSMKEYEASGGSKSRDKKEKVELKKKKETKKDSPSKLMSGSFFKSKEY 656
Query: 663 IESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEKKSKSKPKG 722
I +GSSS ++ K+ SD+DS + +K+KEK + K++ +P
Sbjct: 657 ISDDGSSS-----DESKKSEKKRSDDDSADEKEKEKEKKKK-----------KNEKRPAE 700
Query: 723 DKSKSKSKKEDEIDDEEYDEPVESTPP 749
D SK+ KK D+ DD E +EP+ESTPP
Sbjct: 701 DSSKTTKKKRDQSDDSEVEEPIESTPP 727
>gi|332025514|gb|EGI65677.1| FACT complex subunit Ssrp1 [Acromyrmex echinatior]
Length = 721
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/679 (63%), Positives = 539/679 (79%), Gaps = 26/679 (3%)
Query: 19 CPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFK 78
PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRIFLKNG+LHRF GFK
Sbjct: 2 TPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRIFLKNGTLHRFKGFK 61
Query: 79 ETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQ 138
E+E +KI FF N+K D+ EKELS++GWNWG +F G+VLSFDV + TAFEIPL DVSQ
Sbjct: 62 ESEQEKIAKFFSANYKKDMLEKELSLKGWNWGTARFNGSVLSFDVGHHTAFEIPLYDVSQ 121
Query: 139 CTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGD 198
C TGKNEVT+EFH ND+A SL+EMRF+IP ++ + D DPVEAF VM++ASVI+ +GD
Sbjct: 122 CNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSD-SVDQDPVEAFHQQVMDKASVISVSGD 180
Query: 199 AIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVI 258
AIA+F EI CLTPRGRYDIKIF +FFQLHGKTFDYKIP+STVLR+F LPHKD RQ FFV+
Sbjct: 181 AIAIFREIHCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSTVLRLFLLPHKDNRQMFFVV 240
Query: 259 SLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKI 318
SLDPPIKQGQTRYH+L LLFNQ+E + +ELPF+E+ELKEKYE KL KELSGPT+EV+ K+
Sbjct: 241 SLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDKLTKELSGPTFEVLGKV 300
Query: 319 MKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATV 378
MKVI+NRK+T PG F GHTGT A++CS+KAAAGY+YPLERGFI++HKPPIHIRFEEIA++
Sbjct: 301 MKVIINRKLTGPGHFTGHTGTPAISCSFKAAAGYLYPLERGFIYVHKPPIHIRFEEIASL 360
Query: 379 NFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYK 438
NFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKLRVKN GK +KPNY
Sbjct: 361 NFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITAKKLRVKNRGKSDKPNYD 420
Query: 439 EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDE--STDEDFNPDQAESDVAEEYDSN 496
EDFG SD E EPDAYLARVK EA ERD E+++D +E STDEDFNP+Q ESDVAEEYDSN
Sbjct: 421 EDFGDSDQEDEPDAYLARVKAEAQERDGEENQDSEEEGSTDEDFNPNQDESDVAEEYDSN 480
Query: 497 PTPTDSDEDSDASEGTKKKKKEKSRKTI---------TISEKPRKSKKDKESSGGSTKRK 547
P +DS++ ++ KK+KK+K +K TISEKPRK +K K K
Sbjct: 481 PNSSDSEDSDASAASHKKEKKDKDKKEKKEKKSKSAKTISEKPRKQRKSK---------K 531
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKV 607
++D+N PK+P SA+M+W + R+ IK DNPG+S T+IAKKGGE+W+ + K+K+E++ K
Sbjct: 532 ERDENKPKRPPSAFMLWLSSARDSIKADNPGLSITDIAKKGGEMWREL--KDKSEWEAKA 589
Query: 608 NKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNG 667
KAK+DY ++K Y+ SGGG++ K ++KK KK++ S +S KSKE+I +
Sbjct: 590 AKAKKDYMASMKEYQTSGGGKEKTKEKKIENKKKETKKDSPSKQMSGSGFKSKEYISEDD 649
Query: 668 SSSDSDDDKKASSKRKRDS 686
SSS D+ K S+K K D+
Sbjct: 650 SSS---DENKKSAKEKSDN 665
>gi|307180072|gb|EFN68140.1| FACT complex subunit Ssrp1 [Camponotus floridanus]
Length = 739
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/768 (60%), Positives = 575/768 (74%), Gaps = 47/768 (6%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ ++ +E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRI
Sbjct: 4 LEYPDIFAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF N+K D+ EKELS++GWNWG KF G++LSFDV
Sbjct: 64 FLKNGTLHRFKGFKEADQEKIAKFFSVNYKKDMLEKELSLKGWNWGTAKFTGSILSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQC TGKNEVT+EFH ND+A SL+EMRF+IP ++ A D DPVEAF
Sbjct: 124 HHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPISDSA-DQDPVEAFHQ 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM++ASVI+ +GDAIA+F EI CLTPRGRYDIKIF SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 QVMDKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPF+E+ELKEKYE KL
Sbjct: 243 LLPHKDSRQTFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDKLT 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KEL+GPTYEV+ K+MKVI+NRKIT PG F GHT T A+ CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELTGPTYEVLGKVMKVIINRKITGPGHFLGHTKTPAIGCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFEIEL SGV+HTFSSIEKEEYGKLFDFI KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVVHTFSSIEKEEYGKLFDFITSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDE-STDEDFNPD 483
RVKN GK +KP Y EDFG SD E EPDAYLARVK EA ERD +++D +E STDEDFNP+
Sbjct: 423 RVKNRGKTDKPKYDEDFGDSDQEDEPDAYLARVKAEAQERDGVENQDSEEGSTDEDFNPN 482
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTI-----TISEKPRKSKKDKE 538
Q SDVAEEYDSNP ++SDEDSDASE + KK+K++ ++ T+SEKPRK
Sbjct: 483 QDVSDVAEEYDSNPNSSESDEDSDASEASHKKEKKEKKEKKSKSAKTVSEKPRKQ----- 537
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
+K+KD N PK+P +A+M+W N RE IK DNPGI+ TEIAKKGGE+W+ + K
Sbjct: 538 ----RKPKKEKDANKPKRPPTAFMLWLNSARESIKADNPGINVTEIAKKGGEMWREL--K 591
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKK-------ETASTA 651
+K+E++ K KAK++Y ++K Y+ SGGG+ + + ++ + +KK ++ S
Sbjct: 592 DKSEWEAKAAKAKKEYAASMKEYEASGGGKSKEKKEKTEKTERTEKKKKETPKKDSPSKM 651
Query: 652 VSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESE 711
++ KSKE+I + SSSD K++KK +ES E
Sbjct: 652 MTGSSFKSKEYISDDDSSSDE------------------SKKSEKKSSDNESGE---GKE 690
Query: 712 KEKKSKSKPKGDKSKSKSKKEDEIDDE-EYDEPVESTPPSSDAGSDAS 758
K+KK + +P D K KKE E + +EP+ESTPPSSDA S S
Sbjct: 691 KKKKGEKRPTEDAGKRTVKKEKRNQSESDAEEPIESTPPSSDAESKNS 738
>gi|312385332|gb|EFR29859.1| hypothetical protein AND_00900 [Anopheles darlingi]
Length = 730
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/688 (62%), Positives = 521/688 (75%), Gaps = 19/688 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LE+ +SSE RGA+CPGKLK+TD +IVFK+ KTGKVEQIN D++ +N+Q+ VG++
Sbjct: 1 MADFLEYSSISSEIRGAMCPGKLKMTDTSIVFKSDKTGKVEQINANDIELLNYQRFVGSF 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+FLKNGSLHRF GF E KI F K N+K+D+ EKELS+RGWNWG F G VLS
Sbjct: 61 GLRVFLKNGSLHRFLGFTGDE-GKIADFVKKNYKLDMLEKELSMRGWNWGAVHFKGAVLS 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDV N T+FEIPL VSQC GKNEVTVEFH ND+A SL+EMRF+IPT+E A D DPVE
Sbjct: 120 FDVENKTSFEIPLNHVSQCNVGKNEVTVEFHRNDDAPVSLMEMRFHIPTSESA-DIDPVE 178
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF+++VM QASVI+ +GDAIA+F EI CLTPRGRYDIK+F +FFQLHGKT+D+KIP S+V
Sbjct: 179 AFQENVMKQASVISVSGDAIAIFREIHCLTPRGRYDIKVFQTFFQLHGKTYDFKIPTSSV 238
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LF DE + +ELPFSE+EL+EKYE
Sbjct: 239 LRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIELPFSEEELREKYE 298
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
KL KELSGP YEV+ KIMKVI+NRK+T PGSF GH+GT A+ CS+KAAAGY+YPLERGF
Sbjct: 299 DKLTKELSGPVYEVLGKIMKVIINRKLTGPGSFIGHSGTPAIGCSFKAAAGYLYPLERGF 358
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRFEEIA+VNFARSGGSTRSFDFEIELK+G +HTFSSIEKEEY KLFDFI
Sbjct: 359 IYVHKPPVHIRFEEIASVNFARSGGSTRSFDFEIELKTGTVHTFSSIEKEEYSKLFDFIS 418
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER--DDEDDEDEDESTDE 478
KKL VKNTG K +YK+DF SD+E EPDAYLARVK EA ER DD+D D +ESTDE
Sbjct: 419 SKKLHVKNTGG--KASYKDDFADSDNEGEPDAYLARVKAEAKERDEDDDDGSDSEESTDE 476
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
DFNP+Q ESDVAEE+DSN + ++ + G + +K EK K K+
Sbjct: 477 DFNPNQQESDVAEEFDSNVESSSDSDEDGSGGGGSGSGSDAEKKRDKRKEKKEKIKEKSP 536
Query: 539 SSGGSTKRK--------KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
R+ KD NAPK+P +A+M+W N R++I+KDNPG+S TEIAKKGGE
Sbjct: 537 KKKVKEPREKKSKKSSKTKDANAPKRPATAFMLWMNATRDQIRKDNPGLSITEIAKKGGE 596
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK---PAKKKET 647
LWK + K+K +++ K KAKE+Y EA+ AYK SGGG +D+GK K KK +K
Sbjct: 597 LWKDL--KDKKDWEAKAAKAKENYTEAMAAYKASGGGASTDNGKGEKRKKGPSTTPRKAD 654
Query: 648 ASTAVSPHKVKSKEFIESNGSSSDSDDD 675
S+ ++ KSKE+IE SS DSD+D
Sbjct: 655 VSSQMTGSGFKSKEYIEDTSSSGDSDND 682
>gi|357608069|gb|EHJ65806.1| hypothetical protein KGM_13851 [Danaus plexippus]
Length = 719
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/632 (65%), Positives = 514/632 (81%), Gaps = 22/632 (3%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
E LE+ +VS+E +GA+ PG+LK+TDQ+IVFKN KTGKVEQI+ D++ VN+QK +G+W L
Sbjct: 2 EFLEYNDVSAEIKGAMVPGRLKMTDQSIVFKNSKTGKVEQISSNDIELVNFQKFIGSWGL 61
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
RIFLKNG+LHR+ GFKE E +K+ FFK+N+ D+ EKELS++GWNWG KF G VLSF+
Sbjct: 62 RIFLKNGTLHRYGGFKEGEQEKVAKFFKSNYHKDMLEKELSLKGWNWGTAKFNGAVLSFN 121
Query: 123 VNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAF 182
V + TAFEIPL +VSQC TGKNEVT+EFH ND+ SL+EMRF+IPT+E+AGD D V+AF
Sbjct: 122 VGSNTAFEIPLHNVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSELAGDMDAVDAF 181
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
VMN+ASVI+ +GDAIA+F E+QCLTPRGRYDIK+F +FFQLHGKTFDYKIP+STVLR
Sbjct: 182 HQQVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMSTVLR 241
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF +E + +ELPF+E++LKEKYEGK
Sbjct: 242 LFLLPHKDTRQMFFVVSLDPPIKQGQTRYHYLVLLFGIEEETSLELPFTEEDLKEKYEGK 301
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
+ KELSGPTYEV+AKIMKVI+NR++T PG F GH T A+ CSYKAAAGY+YPLE+GFI+
Sbjct: 302 ITKELSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKTPAIACSYKAAAGYLYPLEKGFIY 361
Query: 363 IHKPPIHIRFEEIATVNFARSGGS-TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
+HKPP+HIRFEEIA+VNFAR G S T+SFDFEIELKSG +HTFSSIEK EY KLFD+I
Sbjct: 362 VHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKSGSVHTFSSIEKGEYDKLFDYITS 421
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFN 481
KKL VKNTGK +K Y +DFG SD EKEPDAYLARVK EA ERD +D ++ + FN
Sbjct: 422 KKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLARVKAEAEERDVDDSDESTDED---FN 478
Query: 482 PDQA-ESDVAEEYDSNPTPTDSDEDSDASEGT-----KKKKKEKSRKTITISEKPRKSKK 535
PD+A ESDVAEEYD+NP+ S EDSDAS G+ +KKK++K +KTITISE+PRK K+
Sbjct: 479 PDKAKESDVAEEYDTNPS---SSEDSDASGGSGDSKKEKKKEKKPKKTITISEQPRKRKE 535
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
+K+++KD NAPK+P +A+M+W ++ R+ I DNPGI TEIAKKGGELW+ +
Sbjct: 536 -------KSKKREKDVNAPKRPSTAFMLWLSEHRKGIIDDNPGIKVTEIAKKGGELWRDL 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGG 627
K+K +++EK NKAKE+YN+A+K YK+SG
Sbjct: 589 --KDKTQWEEKANKAKEEYNQAMKKYKDSGAA 618
>gi|156553871|ref|XP_001600877.1| PREDICTED: FACT complex subunit Ssrp1-like [Nasonia vitripennis]
Length = 735
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/624 (66%), Positives = 515/624 (82%), Gaps = 6/624 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
L++ ++++E +GA+ PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK VGTW LRI
Sbjct: 4 LDYPDITAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFVGTWGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FLKNG+LHRF GFKE + +KI FF TN+K ++ EKELS++GWNWG KF G+VLSFDV
Sbjct: 64 FLKNGTLHRFRGFKEGDQEKIAKFFSTNYKKEMLEKELSLKGWNWGTAKFYGSVLSFDVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+ TAFEIPL DVSQCTTGKNEVT+EFH ND+A SL+EMRF+IP ++ + D DPV+ F
Sbjct: 124 HHTAFEIPLYDVSQCTTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSDTS-DQDPVDQFHK 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ +GDAIA+F EIQCLTPRGRYDIK+F SFFQLHGKTFDYKIP+STVLR+F
Sbjct: 183 EVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKVFQSFFQLHGKTFDYKIPMSTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLFNQ+E + +ELPFSE+ELKEKYE KL
Sbjct: 243 LLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFSEKELKEKYEDKLT 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGPTYEV+ K+MKVI+NRK+T PGSF+GH+GT A+ CS+KAAAGY+YPLERGFI++H
Sbjct: 303 KELSGPTYEVLGKVMKVIINRKLTGPGSFQGHSGTPAIGCSFKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEI++VNFAR GGSTRSFDFEIEL +GV+HTFSSIEKEEYGKL+DFI KKL
Sbjct: 363 KPPIHIRFEEISSVNFARGGGSTRSFDFEIELTTGVVHTFSSIEKEEYGKLYDFINSKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQ 484
RVKN+ KG+KP Y +DFG+SD E EPDAYLARVK EA ERDD+DD+DEDESTDEDF P
Sbjct: 423 RVKNSSKGDKPGYNDDFGNSDQEDEPDAYLARVKAEAKERDDDDDDDEDESTDEDFKPTA 482
Query: 485 AESDVAEEYDSNPTPT-DSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGS 543
ESDVAEEYDSNP T DSD DS+AS G+ K +K++ ++ K K+ +
Sbjct: 483 EESDVAEEYDSNPNDTSDSDADSNASGGSGKMEKKEKKEKKEKKSKSAKTSEKPRKP--R 540
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
+K+KD+N PK+P SAYM++ N +RE+IK PG+ TE+ +KGGE+WK + K+K+++
Sbjct: 541 KSKKEKDENKPKRPASAYMLYLNSVREEIKAKYPGLKVTEVVQKGGEMWKEL--KDKSKW 598
Query: 604 DEKVNKAKEDYNEALKAYKESGGG 627
+EK +AKE+Y +A++ YK SGGG
Sbjct: 599 EEKAAEAKEEYLKAMEEYKASGGG 622
>gi|170033411|ref|XP_001844571.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
gi|167874309|gb|EDS37692.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
Length = 728
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/670 (64%), Positives = 515/670 (76%), Gaps = 14/670 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LE+ +SSE RGALCPGKLK+TD IVFKN+KTG+VEQIN D++ +N+Q+ VG++
Sbjct: 1 MADFLEYGSISSEVRGALCPGKLKMTDTAIVFKNEKTGRVEQINASDIELLNYQRCVGSF 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+FLKNG+LHRF GF E KI SF K N+K+D+ EKELS+RGWNWG F G+VLS
Sbjct: 61 GLRVFLKNGTLHRFMGFTGDE-QKIASFAKKNYKLDMLEKELSMRGWNWGTVHFKGSVLS 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDV N T+FEIPL VSQC TGKNEVTVEFH ND+A SL+EMRF+IP +E A DTDPVE
Sbjct: 120 FDVENKTSFEIPLNHVSQCNTGKNEVTVEFHRNDDAPVSLMEMRFHIPISESA-DTDPVE 178
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF++ VM QASVI+A+GDAIA+F EI CLTPRGRYDIK+F SFFQLHGKT+D+KIP S+V
Sbjct: 179 AFQEQVMKQASVISASGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHGKTYDFKIPTSSV 238
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LF DE + +ELPF+E+ELKEKYE
Sbjct: 239 LRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIELPFTEEELKEKYE 298
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
KL KELSGP YEV+ KIMKVI NRK+T PG+F GH+GT AV CSYKAAAGYIYPLERGF
Sbjct: 299 DKLTKELSGPVYEVLGKIMKVINNRKLTGPGTFIGHSGTPAVGCSYKAAAGYIYPLERGF 358
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRFEEIA+VNFARSGGSTRSFDFEIELK+G ++TFSSIEKEEYGKLFDFI
Sbjct: 359 IYVHKPPVHIRFEEIASVNFARSGGSTRSFDFEIELKTGTIYTFSSIEKEEYGKLFDFIS 418
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED- 479
KKL VKNTGK K YKEDF SD+E EPDAYLARVK EA ERDD+ D+D+D D
Sbjct: 419 SKKLHVKNTGKDGKNAYKEDFADSDNENEPDAYLARVKAEAKERDDDGDDDDDSEESTDE 478
Query: 480 -FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
FNP+QAESDVAEE+DSN +S + D+ G ++++K + +K +K KK +
Sbjct: 479 DFNPNQAESDVAEEFDSN---VESSSEEDSEGGGGGGSDDEAKKKLKEKKKEKKEKKKER 535
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
K KK PK+P +A+MMW N RE+IKK+NPGIS TEIAKKGGE+WK + K
Sbjct: 536 KERKEKKPKKSKSGGPKRPSTAFMMWLNATRERIKKENPGISVTEIAKKGGEMWKEL--K 593
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD-----DGKTSKSKKPAKKKETASTAVS 653
+K+E++ K KAKE+Y EA+K YK +GGG D GK KS+ KK + A+
Sbjct: 594 DKSEWEGKAAKAKEEYVEAMKEYKAAGGGGSGDEGGKASGKKRKSEGSPKKTVSTGAAMK 653
Query: 654 PHKVKSKEFI 663
KSKE+I
Sbjct: 654 GSGFKSKEYI 663
>gi|157129263|ref|XP_001655339.1| structure-specific recognition protein [Aedes aegypti]
gi|108872274|gb|EAT36499.1| AAEL011425-PA [Aedes aegypti]
Length = 727
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/620 (66%), Positives = 490/620 (79%), Gaps = 6/620 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +SSE RGA+CPGKLK+TD IVFKN+KTGKVEQIN D+D +N+QK VG + LR+
Sbjct: 4 LEYSSISSEVRGAMCPGKLKMTDTAIVFKNEKTGKVEQINASDIDLINFQKFVGNFGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
F+KNG LHRF GF E KI F K N+K+D+ EKELS+RGWNWG F G+VLSFD+
Sbjct: 64 FMKNGLLHRFIGFTGDE-QKIADFVKKNYKLDMLEKELSMRGWNWGTVHFKGSVLSFDIE 122
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N T+FEIPL VSQC +GKNEVTVEFH ND+A SL+EMRF+IPT+E A +TDPVEAF++
Sbjct: 123 NKTSFEIPLNHVSQCNSGKNEVTVEFHRNDDAPVSLMEMRFHIPTSESA-ETDPVEAFQE 181
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM QASVI+ATGDAIA+F EI CLTPRGRYDIK+F SFFQLHGKT+D+KIP S+VLR+F
Sbjct: 182 QVMKQASVISATGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHGKTYDFKIPTSSVLRLF 241
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ FFVISLDPPIKQGQTRYHFL LF DE + +ELPF+E+ELKEKYE KL
Sbjct: 242 LLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIELPFTEEELKEKYEDKLT 301
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
KELSGP YEV+ KIMKVI+NRK+T PG+F GH+GT A+ CSYKAAAGY+YPLERGFI++H
Sbjct: 302 KELSGPVYEVLGKIMKVIINRKLTGPGTFIGHSGTPAIGCSYKAAAGYLYPLERGFIYVH 361
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPP+HIRFEEIA+VNFARSGGSTRSFDFEIELK+ ++TFSSIEKEEYGKLFDFI KKL
Sbjct: 362 KPPVHIRFEEIASVNFARSGGSTRSFDFEIELKTSTIYTFSSIEKEEYGKLFDFISSKKL 421
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER-DDEDDEDEDESTDEDFNPD 483
VKNTGK K NYKEDF SD+E EPDAYLARVK EA ER DD+D D DESTDEDFNP+
Sbjct: 422 HVKNTGKDGKNNYKEDFADSDNEGEPDAYLARVKAEAKERDDDDDGSDSDESTDEDFNPN 481
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK-EKSRKTITISEKPRKSKKDKESSGG 542
Q ESDVA+E+DSN T D+ + G+ +K+ K EK K + ++
Sbjct: 482 QQESDVADEFDSNVESTSEDDSDEGGSGSGSDGGAKKAEKKKEKKEKKEKKVRKEKKERK 541
Query: 543 STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAE 602
+K KK PK+P +A+M+W N RE IKKDNPGIS TEIAKKGGE+WK + K+K+E
Sbjct: 542 ESKPKKSKSGGPKRPATAFMIWLNATRESIKKDNPGISVTEIAKKGGEMWKEM--KDKSE 599
Query: 603 YDEKVNKAKEDYNEALKAYK 622
++ K KAKE+Y EAL AYK
Sbjct: 600 WEGKAAKAKEEYAEALAAYK 619
>gi|195148932|ref|XP_002015416.1| GL11071 [Drosophila persimilis]
gi|198455718|ref|XP_001357531.2| GA18454 [Drosophila pseudoobscura pseudoobscura]
gi|221222504|sp|Q293F6.2|SSRP1_DROPS RecName: Full=FACT complex subunit Ssrp1; AltName: Full=Facilitates
chromatin transcription complex subunit Ssrp1; AltName:
Full=Recombination signal sequence recognition protein;
AltName: Full=Single-strand recognition protein
gi|194109263|gb|EDW31306.1| GL11071 [Drosophila persimilis]
gi|198135366|gb|EAL24655.2| GA18454 [Drosophila pseudoobscura pseudoobscura]
Length = 727
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/718 (57%), Positives = 527/718 (73%), Gaps = 21/718 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG L G+LK+TDQNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLSSGRLKLTDQNIIFKNNKTGKVEQISVDDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K+G+LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKSGALHRFTGFRDSEHEKLGKFIKDAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD ++ T FE+PL VSQC TGKNEVT+E+H ND+A L+EMRF+IP E A D DPVE
Sbjct: 121 FDKDSKTIFEVPLSHVSQCVTGKNEVTLEYHQNDDAPVGLLEMRFHIPAVESA-DDDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA---AERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++EST
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEEDDDGDDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DEDF P++ ESDVAEEYDSN D+ + G ++K + +K K
Sbjct: 479 DEDFKPNENESDVAEEYDSNVEDDSDDDSDASGGGGDGGTDGSTKKKHKEKKNEKKEKTH 538
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
KE KKKD PK+ SA+M+W ND RE IK++NPGI TEIAKKGGE+WK +
Sbjct: 539 KEKEKIKKPTKKKDTGKPKRGTSAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL- 597
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKE-SGGGQDSDDGKTSKSKK-------PAKKKETA 648
K+K++++E NK K Y E ++ YK +GGG + + G TSK+ K P+KK T+
Sbjct: 598 -KDKSKWEEAANKDKIRYQEEMRNYKSGAGGGSEDEKGGTSKATKKRKSEPSPSKKANTS 656
Query: 649 STAVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESD 706
+ KSKE+I + S+SD + K K+K S + K K KK E +SD
Sbjct: 657 GSG-----FKSKEYISDDESTSDDQEKVKEIPKKKNKSTAEDKDKNSKKSESEGGDSD 709
>gi|195123163|ref|XP_002006078.1| GI18750 [Drosophila mojavensis]
gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mojavensis]
Length = 734
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/729 (57%), Positives = 539/729 (73%), Gaps = 27/729 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LE+ ++++E RG L G+LK+T+QNI+FKN KTGKVEQI D+D +N QK VGTW
Sbjct: 1 MVETLEYNDINAEVRGVLSSGRLKLTEQNIIFKNNKTGKVEQIAADDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LRIF K+G+LHRF GF+++E +K+ + K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRIFTKSGALHRFTGFRDSEHEKLGKYIKEAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A D DPVE
Sbjct: 121 FDKDTKTIFEVPLSYVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-DEDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VMN+ASVI+A+G++IA+F EI LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+A+ CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAIGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA---AERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++EST
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEEDDDGDDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSN-----PTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
DEDF P++ ESDVAEEYDSN +D+ G +K K +K +
Sbjct: 479 DEDFKPNENESDVAEEYDSNVQSDSDDDSDASGGGGGGGGDSDGASKKKHKEKKREKKEK 538
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K KK KE KKKD N PK+P +A+M+W ++ RE+IK+DNPGI TEIAKKGGE+
Sbjct: 539 KEKKHKEKERTKKTTKKKDSNKPKRPTTAFMLWLSETREQIKRDNPGIKVTEIAKKGGEM 598
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGG-QDSDDGKTSKSKKPAKKKETAST 650
WK + K+K++++E +K K+ Y +A++ YK GG SDD +TS SK P K+ S+
Sbjct: 599 WKEL--KDKSKWEELASKDKQRYQDAMRNYKPGAGGDAASDDDETSSSKAPKKR----SS 652
Query: 651 AVSPHK--------VKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSE 702
VSP K KSKE+I + S+ SDD K ASS+ + + S+A +KKK + SE
Sbjct: 653 DVSPTKKSNTSGSGFKSKEYISDD-DSTSSDDGKNASSEPAKKKSKSSEATSKKKAKDSE 711
Query: 703 SESDSGESE 711
SE+++ + E
Sbjct: 712 SEAEATDEE 720
>gi|194752689|ref|XP_001958652.1| GF12460 [Drosophila ananassae]
gi|190619950|gb|EDV35474.1| GF12460 [Drosophila ananassae]
Length = 728
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/666 (59%), Positives = 504/666 (75%), Gaps = 7/666 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+T+Q+I+FKN KTGKVEQI D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKLTEQHIIFKNTKTGKVEQIAADDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K+G LHRF GF+++E +K+ F K + D+ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKSGVLHRFTGFRDSENEKLGKFIKDAYSQDMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A D DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-DEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VMN+ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMNKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPF+E+EL++KY+
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFTEEELRDKYD 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA--AERDDEDDEDEDESTD 477
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++ESTD
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDGDDSDEESTD 478
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
EDF P++ ESDVAEEYDSN D+ + G +K K +K +K KK K
Sbjct: 479 EDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKHKEKKAEKKEKKEKKHK 538
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
E KKK+ + PK+ +A+M+W ND REKIKK+NPGI TEIAKKGGE+WK +
Sbjct: 539 EKERTKKPSKKKESDKPKRATTAFMLWLNDTREKIKKENPGIKVTEIAKKGGEMWKEL-- 596
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKV 657
K+K++++E K K Y E ++ YK SGGG D++ G + K+ + T S
Sbjct: 597 KDKSKWEEAAAKDKLRYQEEMRNYKPSGGGSDNEKGGKASKKRKSDVSPTKKANSSGSGF 656
Query: 658 KSKEFI 663
KSKE+I
Sbjct: 657 KSKEYI 662
>gi|195382097|ref|XP_002049768.1| GJ21774 [Drosophila virilis]
gi|194144565|gb|EDW60961.1| GJ21774 [Drosophila virilis]
Length = 729
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/710 (57%), Positives = 522/710 (73%), Gaps = 32/710 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +ALE+ ++++E RG L G+LK+T+QNI+FKN KTGKVEQI D+D +N QK VGTW
Sbjct: 1 MVDALEYNDINAEVRGVLSSGRLKLTEQNIIFKNNKTGKVEQIAAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LRIF K+G+LHRF+GF+++E +K+ + K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRIFTKSGALHRFSGFRDSEHEKLGKYIKEAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A D DPVE
Sbjct: 121 FDKDTKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-DEDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VMN+ASVI+A+G++IA+F EI LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA---AERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++EST
Sbjct: 420 QKKLHVSNMGK-DKTGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKS---RKTITISEKPRKS 533
DEDF P++ ESDVAEEYDSN ++ + G + S K +K +K
Sbjct: 479 DEDFKPNENESDVAEEYDSNVQSDSDEDSDASGGGGEGDSDAASKKKHKEKKREKKEKKE 538
Query: 534 KKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWK 593
KK KE KKKD N PK+ +A+M+W ND RE+IK+DNPGI TEIAKKGGE+WK
Sbjct: 539 KKHKEKERTKKTTKKKDSNKPKRATTAFMLWLNDTREQIKRDNPGIKVTEIAKKGGEMWK 598
Query: 594 TVSSKEKAEYDEKVNKAKEDYNEALKAYKE-SGGGQDSDDGKTSKSKK-------PAKKK 645
+ K+K++++E K ++ Y + ++ YK +G G D +D +SK K PAKK
Sbjct: 599 EL--KDKSKWEEIAAKDRQRYQDEMRNYKPGAGAGSDDEDSPSSKPVKKRTSEPSPAKKA 656
Query: 646 ETASTAVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTK 695
T+ + KSKE+I S+DD +S + K+ + E +K K+K
Sbjct: 657 NTSGSG-----FKSKEYI--------SEDDSTSSEEAKKTNSEPAKKKSK 693
>gi|195489309|ref|XP_002092681.1| GE11532 [Drosophila yakuba]
gi|194178782|gb|EDW92393.1| GE11532 [Drosophila yakuba]
Length = 726
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/673 (60%), Positives = 519/673 (77%), Gaps = 20/673 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+TDQNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKLTDQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K+G LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKSGVLHRFTGFRDSEHEKLGKFIKDAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA---AERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++EST
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DEDF P++ ESDVAEEYDSN +DSD+DSDAS G K RK +K +K KK
Sbjct: 479 DEDFKPNENESDVAEEYDSN-VESDSDDDSDASGGGGDSDGAKKRKEKKSEKKEKKEKKH 537
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
KE KKKD PK+ +A+M+W ND RE IK+DNPGI TEIAKKGGE+WK +
Sbjct: 538 KEKERTKKASKKKDSGKPKRATTAFMLWLNDTRESIKRDNPGIKVTEIAKKGGEMWKEL- 596
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYK-ESGGGQDSD-DGKTSKSKK----PAKKKETAST 650
K+K+++++ K K+ Y++ ++ YK E+GGG D++ GK++K +K P+KK T+ +
Sbjct: 597 -KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGGSDNEKGGKSTKKRKTEPSPSKKANTSGS 655
Query: 651 AVSPHKVKSKEFI 663
KSKE+I
Sbjct: 656 G-----FKSKEYI 663
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/732 (55%), Positives = 520/732 (71%), Gaps = 40/732 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +ALE+ ++++E RG L G+LK+T+QNI+FKN KTGKVEQI D+D +N QK VGTW
Sbjct: 1 MVDALEYNDINAEVRGVLSSGRLKLTEQNIIFKNTKTGKVEQIAADDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LRIF K+G+LHRF GF+++E +K+ + K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRIFTKSGALHRFTGFRDSEHEKLSKYIKDAYAQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IPT E A D DPV+
Sbjct: 121 FDKDTKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPTVESA-DEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VMN+ASVI+A+G++IA+F EI LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEDTTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK---REAAERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K RE E DD+ ++ ++EST
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDAEDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEK----SRKTITISEKPRK 532
DEDF P++ ESDVAEEYDSN ++ + G S+K ++ +K
Sbjct: 479 DEDFKPNENESDVAEEYDSNVQSDSDEDSDASGGGGGGGGGGDSDGVSKKKHKEKKREKK 538
Query: 533 SKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELW 592
KK KE KKKD N PK+P +A+M+W ND RE+IK+DNPGI TEIAKKGGE+W
Sbjct: 539 EKKHKEKERTKKPTKKKDSNKPKRPTTAFMLWLNDTREQIKRDNPGIKVTEIAKKGGEMW 598
Query: 593 KTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAV 652
K + K+K+++DE +K K+ Y + ++ Y KP KK T+ +
Sbjct: 599 KEL--KDKSKWDEAASKDKQRYQDEMRNY------------------KPVKKSNTSGSG- 637
Query: 653 SPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESES-----DS 707
KSKE+I S+S D K S K+ S A KK K+ DS
Sbjct: 638 ----FKSKEYISDEDSTSSEDVKKSGSEPAKKKSKSADGANAKKSKKSESEVEPSEEDDS 693
Query: 708 GESEKEKKSKSK 719
S+ KKS SK
Sbjct: 694 FRSDDAKKSGSK 705
>gi|194885620|ref|XP_001976465.1| GG19998 [Drosophila erecta]
gi|190659652|gb|EDV56865.1| GG19998 [Drosophila erecta]
Length = 724
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/701 (57%), Positives = 526/701 (75%), Gaps = 24/701 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+TDQNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKLTDQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K+G LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKSGVLHRFTGFRDSEHEKLGKFIKDAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A D DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAED-DPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI +VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEIGSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVKREA---AERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K EA E DD+ D+ ++EST
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DEDF P++ ESDVAEEYDSN D+ + + KK K +K+ +K +K K+
Sbjct: 479 DEDFKPNENESDVAEEYDSNVESDSDDDSDASGGDSDGAKKRKEKKSEKKEKKEKKHKEK 538
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
+ + S KKKD PK+ +A+M+W ND RE IK+DNPGI TEIAKKGGE+WK +
Sbjct: 539 ERTKKAS---KKKDSGKPKRATTAFMLWLNDTRESIKRDNPGIKVTEIAKKGGEMWKEL- 594
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYK-ESGGGQDSDDGKTSKSKK-----PAKKKETAST 650
K+K+++++ K K+ Y++ ++ YK E+GGG D++ G S K+ P+KK T+ +
Sbjct: 595 -KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGGSDNEKGGKSSKKRKTEPSPSKKANTSGS 653
Query: 651 AVSPHKVKSKEFIESNGSSSDSD--DDKKASSKRKRDSDED 689
KSKE+I + S+S D D++ A K K SD D
Sbjct: 654 G-----FKSKEYISDDDSTSSEDEKDNEPAKKKSKPPSDGD 689
>gi|242006908|ref|XP_002424284.1| predicted protein [Pediculus humanus corporis]
gi|212507684|gb|EEB11546.1| predicted protein [Pediculus humanus corporis]
Length = 768
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/625 (61%), Positives = 496/625 (79%), Gaps = 20/625 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ LE+ ++S+E +GA+ PG+LK+TDQ ++FKN KTGKVEQI D++ V+W K VGT+
Sbjct: 1 MTDVLEYNDISAEIKGAMTPGRLKLTDQFVIFKNYKTGKVEQIEKSDIETVHWLKFVGTF 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+R FLKNG+LHRF GFKE E +K+ +FF + +K ++ EKELS++GWNWG KF G++L+
Sbjct: 61 GIRFFLKNGTLHRFKGFKEAEQNKLANFFLSKYKKEMNEKELSLKGWNWGTAKFSGSLLN 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F+V+N TAFEIPL VSQCTTGKNEVT+EFH ND+A +L+EMRF+IP++E G+ DPV+
Sbjct: 121 FEVSNHTAFEIPLNYVSQCTTGKNEVTIEFHQNDDAPVNLMEMRFHIPSSESQGE-DPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +VM++ASVIN +GDA+A+F EIQCLTPRGRYDIK+F+SFFQLHGKTFDYKIP STV
Sbjct: 180 AFHQNVMSKASVINVSGDALAIFREIQCLTPRGRYDIKVFSSFFQLHGKTFDYKIPASTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ--DETSEMELPFSEQELKEK 298
LR+F LPH D RQ FFV+SLDPPIKQGQTRYHFL LF Q DE S +ELP+SE+E+K+K
Sbjct: 240 LRLFLLPHHDKRQIFFVVSLDPPIKQGQTRYHFLVCLFPQGEDEIS-IELPYSEEEVKQK 298
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLER 358
++GK++KE+ G TYEV+A +MK IV RK+T P SF G + T A+ CSYKAAAGY+YP++R
Sbjct: 299 FDGKIEKEMKGQTYEVLATLMKSIVGRKLTYP-SFTGKSDTPAIACSYKAAAGYLYPMDR 357
Query: 359 GFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDF 418
GFI++HKPP +IRFEE+A+VNFARSGGSTRSFDFE+ELK+GV+HTFSSIEK+EY K++DF
Sbjct: 358 GFIYVHKPPFYIRFEEVASVNFARSGGSTRSFDFEVELKNGVVHTFSSIEKDEYEKMYDF 417
Query: 419 IREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD--EDEDEST 476
I KKL VKN GK +KPNY +DF SD E DAYL RVKREA ERD+ D +++EST
Sbjct: 418 IVLKKLIVKNRGKADKPNYNDDFVDSDQEN--DAYLVRVKREAEERDENGDGASNDEEST 475
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DEDFNP+Q ESDVAEEYDSN T+SDE+ + K+KK++K +K TISEKPRK
Sbjct: 476 DEDFNPNQEESDVAEEYDSNAPTTESDEEGGSDASGKEKKEKKHKKAKTISEKPRKK--- 532
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
++K K+ NAPK+P SAY +W N+ R+K+K++ P + TE+AKK GE+W+ +
Sbjct: 533 ------KKEKKIKNSNAPKRPPSAYFIWMNENRDKLKEEYPNLQMTELAKKAGEVWREL- 585
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAY 621
K+K +++EK KAK +Y ALK +
Sbjct: 586 -KDKTKWNEKAKKAKAEYEVALKKF 609
>gi|195436362|ref|XP_002066137.1| GK22092 [Drosophila willistoni]
gi|194162222|gb|EDW77123.1| GK22092 [Drosophila willistoni]
Length = 730
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/672 (59%), Positives = 502/672 (74%), Gaps = 21/672 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ LE+ ++ SE RG L G+LK+T QNI FKN KTGKVEQI D+D +N QK VGTW
Sbjct: 1 MTDVLEYSDIDSELRGVLSAGRLKLTQQNITFKNTKTGKVEQIAADDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K+G LHRF GF+++E +K+ F K + D+ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKSGVLHRFTGFRDSEHEKLGKFIKDAYSQDMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A D DPV+
Sbjct: 121 FDKDTKTIFEVPLAHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-DEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VMN+ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMNKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE ELK+KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELKDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KELSGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFEI LK+G +H FSSIEKEEY KLFDFI
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEITLKNGTVHIFSSIEKEEYAKLFDFIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK---REAAERDDEDDEDEDEST 476
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K RE E +D+ D+ ++EST
Sbjct: 420 KKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDEDDADDSDEEST 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DEDF P++ ESDVA+EYDSN D+ + G E +K +K +K KK
Sbjct: 479 DEDFKPNENESDVADEYDSNVQSDSDDDSDASGGGGGGDSSE-GKKKHKEKKKEKKEKKH 537
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
KE KKKD N PK+ +A+M+W N+ RE+IK+D+PGI TEIAKKGGE+WK +
Sbjct: 538 KEKERTKKPTKKKDDNKPKRATTAFMLWLNETREQIKRDSPGIKVTEIAKKGGEMWKEL- 596
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYK-ESGGGQDSDDGKTSKSKK----PAKKKETASTA 651
K+K++++ K K+ Y + +K YK E+ G D D K+SK +K P+KK T+ +
Sbjct: 597 -KDKSKWENLAAKDKQRYQDEMKNYKPEASGSGDGD--KSSKKRKSDVSPSKKSNTSGSG 653
Query: 652 VSPHKVKSKEFI 663
KSKE+I
Sbjct: 654 -----FKSKEYI 660
>gi|28557563|gb|AAO45187.1| SD06504p [Drosophila melanogaster]
Length = 723
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/701 (56%), Positives = 521/701 (74%), Gaps = 22/701 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K G LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTD 477
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K E DD+D + ++ESTD
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTD 478
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
EDF P++ ESDVAEEYDSN D+ + G +K ++ + ++ ++ K +
Sbjct: 479 EDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKE 538
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+ +KKKD PK+ +A+M+W ND RE IK++NPGI TEIAKKGGE+WK +
Sbjct: 539 KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL-- 596
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK-------PAKKKETAST 650
K+K+++++ K K+ Y++ ++ YK GG DSD+ K KS K P+KK T+ +
Sbjct: 597 KDKSKWEDAAAKDKQRYHDEMRNYKPEAGG-DSDNEKGGKSSKKRKTEPSPSKKANTSGS 655
Query: 651 AVSPHKVKSKEFIESNGSSSDSD--DDKKASSKRKRDSDED 689
KSKE+I + S+S D D++ A+ K K SD D
Sbjct: 656 G-----FKSKEYISDDDSTSSDDEKDNEPATKKSKPPSDGD 691
>gi|24762396|ref|NP_523830.2| structure specific recognition protein [Drosophila melanogaster]
gi|12644386|sp|Q05344.2|SSRP1_DROME RecName: Full=FACT complex subunit Ssrp1; AltName:
Full=Chorion-factor 5; AltName: Full=Facilitates
chromatin transcription complex subunit Ssrp1; AltName:
Full=Recombination signal sequence recognition protein;
AltName: Full=Single-strand recognition protein;
AltName: Full=dSSRP1
gi|296434|emb|CAA48471.1| SSRP1 [Drosophila melanogaster]
gi|7291642|gb|AAF47064.1| structure specific recognition protein [Drosophila melanogaster]
gi|201065989|gb|ACH92404.1| FI07619p [Drosophila melanogaster]
Length = 723
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/701 (56%), Positives = 520/701 (74%), Gaps = 22/701 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K G LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTD 477
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K E DD+D + ++ESTD
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTD 478
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
EDF P++ ESDVAEEYDSN D+ + G +K ++ + ++ ++ K +
Sbjct: 479 EDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKE 538
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+ +KKKD PK+ +A+M+W ND RE IK++NPGI TEIAKKGGE+WK +
Sbjct: 539 KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL-- 596
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK-------PAKKKETAST 650
K+K+++++ K K+ Y++ ++ YK GG DSD+ K KS K P+KK T+ +
Sbjct: 597 KDKSKWEDAAAKDKQRYHDEMRNYKPEAGG-DSDNEKGGKSSKKRKTEPSPSKKANTSGS 655
Query: 651 AVSPHKVKSKEFIESNGSSSDSD--DDKKASSKRKRDSDED 689
KSKE+I + S+S D D++ A K K SD D
Sbjct: 656 G-----FKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 691
>gi|321461212|gb|EFX72246.1| hypothetical protein DAPPUDRAFT_201206 [Daphnia pulex]
Length = 759
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/502 (67%), Positives = 419/502 (83%), Gaps = 6/502 (1%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEF +VS+E +G++ PG+LK+TDQ+IVFKN KTGKVEQI+ D++ VNWQ+L G W LR+
Sbjct: 4 LEFSDVSAEIKGSMTPGRLKLTDQSIVFKNSKTGKVEQISSSDIELVNWQRLAGAWGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
FL+ G+LHR+ GFK+++ DK+ FF +K D+ EKELSV+GWNWG +F G+ +SF+V
Sbjct: 64 FLRTGALHRYGGFKDSDQDKLAKFFTQTYKKDMLEKELSVKGWNWGRAEFSGSTMSFEVG 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N TAFEIPL +VSQCTTGKNEVT+EFH ND+A+ SL+EMR +I +N+ GD D VEAF+
Sbjct: 124 NHTAFEIPLSNVSQCTTGKNEVTLEFHQNDDASVSLMEMRLFIQSNDQGGD-DAVEAFQK 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
VM +ASVI+ATGDAIA+F E+QCLTPRGRYDIK+F SFFQLHGKTFDYKIP STVLR+F
Sbjct: 183 QVMPKASVISATGDAIAIFREVQCLTPRGRYDIKVFQSFFQLHGKTFDYKIPASTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKDGRQ FFV+SLDPPIKQGQTRYHFL LLFN+DE + E+P SE+ELKEK+EG+L
Sbjct: 243 LLPHKDGRQIFFVVSLDPPIKQGQTRYHFLVLLFNKDEETSFEIPLSEEELKEKFEGRLS 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
++ +GPTYEVM+ +MK +VNRK+T+PG+F GH+GT AV CSYKAAAGY+YPLERGFI++H
Sbjct: 303 RDCNGPTYEVMSTVMKAMVNRKVTIPGNFTGHSGTPAVGCSYKAAAGYLYPLERGFIYVH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPPIHIRFEEIA+VNFAR GGSTRSFDFE+E K+GV+HTFSSIEKEEY +L+DF+ KKL
Sbjct: 363 KPPIHIRFEEIASVNFARGGGSTRSFDFEVETKNGVVHTFSSIEKEEYNRLYDFVNNKKL 422
Query: 425 RVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD---DEDDEDEDESTDEDFN 481
RVKNTG+ +K + +DFG SD+E+ PDAYLARVK E +RD D+ D DE+ DEDF
Sbjct: 423 RVKNTGRSDKSAHGDDFGDSDEEEAPDAYLARVKAEGKQRDAVGDDSGGDSDEN-DEDFK 481
Query: 482 PDQAESDVAEEYDSNPTPTDSD 503
P + ESDVAEEYDSN TDS+
Sbjct: 482 PGE-ESDVAEEYDSNVATTDSE 502
>gi|290280|gb|AAA28914.1| single-stranded recognition protein [Drosophila melanogaster]
Length = 723
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/701 (55%), Positives = 519/701 (74%), Gaps = 22/701 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ +++++ RG LC G+LK+T+QNI+F+N KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAQVRGVLCSGRLKMTEQNIIFENTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K G LHRF GF+++E +K+ F K + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPR RYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRRRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTD 477
+KKL V NTGK +K YK+ DFG SD+E EPDAYLAR+K E DD+D + ++ESTD
Sbjct: 420 QKKLHVSNTGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTD 478
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
EDF P++ ESDVAEEYDSN ++ + G +K ++ + ++ ++ K +
Sbjct: 479 EDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKE 538
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+ +KKKD PK+ +A+M+W ND RE K++NPGI TEIAKKGGE+WK +
Sbjct: 539 KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVTEIAKKGGEMWKEL-- 596
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK-------PAKKKETAST 650
K+K+++++ K K+ Y++ ++ YK GG DSD+ K KS K P+KK T+ +
Sbjct: 597 KDKSKWEDAAAKDKQRYHDEMRNYKPEAGG-DSDNEKGGKSSKKRKTEPSPSKKANTSGS 655
Query: 651 AVSPHKVKSKEFIESNGSSSDSD--DDKKASSKRKRDSDED 689
KSKE+I + S+S D D++ A K K SD D
Sbjct: 656 G-----FKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 691
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/769 (50%), Positives = 522/769 (67%), Gaps = 79/769 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+LK+T+Q +VFKN KTGKVEQ+ G +++ ++WQ+L + LRI +K G ++RF GF++
Sbjct: 20 GRLKMTNQGVVFKNSKTGKVEQVQGSEMESISWQRLGAGYGLRIMMKTGGMYRFGGFQDD 79
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
E +++ FF+ +F++ + +EL ++GWNWG +F G+VLSFDV+ +A+EIPL +VS CT
Sbjct: 80 EQERLAKFFQHHFEMPLTTRELCLKGWNWGTARFEGSVLSFDVDKNSAYEIPLGNVSHCT 139
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAI 200
T KNEVT+EFH ND+AA SL+E+RF+IPT+ + DTDP++AF+++V+++AS+I ATGDA+
Sbjct: 140 TAKNEVTLEFHQNDDAAVSLMELRFHIPTDPNS-DTDPIQAFRNNVLSKASIIQATGDAM 198
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
F E+QCLTPRGRYDIKIF SF QLHGKTFDYKIP++TVLR+F LPHKD RQ FFV+SL
Sbjct: 199 VTFKELQCLTPRGRYDIKIFPSFIQLHGKTFDYKIPLTTVLRLFLLPHKDNRQVFFVLSL 258
Query: 261 DPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMK 320
DPPIKQGQTRYHFL LLFN++E + +EL S+ +++EK+E KL K +SGPT+EV++++MK
Sbjct: 259 DPPIKQGQTRYHFLILLFNKEEETSIELALSDADIQEKFEDKLQKNMSGPTFEVISRVMK 318
Query: 321 VIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNF 380
+V RKITVPG+F+GH GT+ +TCSY+A G +YPLERGFI+IHKPP+HIRF+EIA VNF
Sbjct: 319 AVVQRKITVPGNFKGHGGTNCITCSYRAGNGLLYPLERGFIYIHKPPVHIRFDEIACVNF 378
Query: 381 ARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGK----GEKPN 436
ARSGGSTRSFDFE+E KSG++HTFSSIEKEEYG+LFD++ +KKLR+KN G EKPN
Sbjct: 379 ARSGGSTRSFDFEVEAKSGLVHTFSSIEKEEYGRLFDYVSDKKLRIKNRGSLGASKEKPN 438
Query: 437 YKED-FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
Y +D SD E PDAYLARVK E +RD+ D DES+DE FNP ++ S+VAEE+DS
Sbjct: 439 YNDDELIDSDAEDAPDAYLARVKDEGRQRDEGD---SDESSDESFNPGESGSEVAEEFDS 495
Query: 496 NPTPTDSDE-------------DSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGG 542
N + E D+ +KK+K+KS+ T+ E K +K +
Sbjct: 496 NVESSSDSEAGSGGGKGSGSGSDAHEKSKKEKKEKKKSKSAKTVKEPGMKERKPRR---- 551
Query: 543 STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAE 602
++K++D N PK+P SAY +W + R+KIKKDNP S T++ K+ GELWK V+ K K
Sbjct: 552 --QKKERDANKPKRPPSAYFLWLAENRDKIKKDNPSFSITDVTKRAGELWKEVTDKSK-- 607
Query: 603 YDEKVNKAKEDYNEALKAYKESGGGQ---DSDDGK-TSKSKKPAKKKETASTAVSPHK-- 656
++++ +A Y EA+ AY+ S + DSDD K KK + SP K
Sbjct: 608 WEQQAVEAAAKYKEAMAAYQASLSNRPQNDSDDEKEQKSVKKSKPSASKSKPTTSPMKGG 667
Query: 657 -VKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESDSGESEKEKK 715
KSKE+I S+GSS D + KK KKE ES
Sbjct: 668 NFKSKEYISSSGSSDDDESSKKV------------------KKEPKES------------ 697
Query: 716 SKSKPKGDKSKSKSKKEDEIDDEEYDEPVESTPPSSDAGSDASSSEDDD 764
KS P DKS D+EE E STP SS+ D S S DDD
Sbjct: 698 PKSSPVHDKS----------DNEE--EASASTPASSEGDQDMSGSGDDD 734
>gi|427788863|gb|JAA59883.1| Putative nucleosome-binding factor spn pob3 subunit [Rhipicephalus
pulchellus]
Length = 734
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/745 (52%), Positives = 519/745 (69%), Gaps = 49/745 (6%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEF +V E RGA+ G+LK+T+Q +VFKN KTGKVEQ+ G D++ ++WQ++ + LRI
Sbjct: 4 LEFPDVFKEDRGAMTSGRLKMTNQGVVFKNSKTGKVEQVQGSDMESISWQRIGAGYGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+K+G ++RF GF++ E +++ FF+ +F++ + +EL ++GWNWG +F G+VLSFDV+
Sbjct: 64 MMKSGGMYRFGGFQDDEQERLAKFFQHHFELPLASRELCLKGWNWGTARFEGSVLSFDVD 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
+A+EIPL +VS CTT KNEVT+EFH ND+AA SL+E+RF+IPT+ +TDP++AF++
Sbjct: 124 KHSAYEIPLANVSHCTTAKNEVTLEFHQNDDAAVSLMELRFHIPTDP-NSETDPIQAFRN 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
+V+++AS+I ATGDA+ F E+QCLTPRGRYDIKIF SF QLHGKTFDYKIP++TVLR+F
Sbjct: 183 NVLSKASIIQATGDAMVTFKELQCLTPRGRYDIKIFPSFIQLHGKTFDYKIPLTTVLRLF 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPHKD RQ FFV+SLDPPIKQGQTRYHFL LLFN++E + +EL S+ +++EK+E KL
Sbjct: 243 LLPHKDNRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEDTSIELALSDADIQEKFEDKLQ 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
K +SGPT+EV++++MK +V RKITVPG+F+GH GT+ +TCSY+A G +YPLERGFI+IH
Sbjct: 303 KNMSGPTFEVISRVMKAVVQRKITVPGNFKGHGGTNCITCSYRAGNGLLYPLERGFIYIH 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
KPP+HIRF+EI+ VNFARSGGSTRSFDFE+E KSG++HTFSSIEKEEYG+LFD++ EKKL
Sbjct: 363 KPPVHIRFDEISCVNFARSGGSTRSFDFEVEAKSGLVHTFSSIEKEEYGRLFDYVSEKKL 422
Query: 425 RVKNT----GKGEKPNYKED-FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED 479
R+KN G EKPNY +D SD E PDAYLARVK E +R D+ D DES+DE
Sbjct: 423 RIKNRGTLGGTKEKPNYNDDELIDSDAEDAPDAYLARVKDEGRQR---DEGDSDESSDES 479
Query: 480 FNPDQAESDVAEEYDSN---------------PTPTDSDEDSDASEGTKKKKKEKSRKTI 524
FNP ++ S+VAEE+DSN + K+KK++KSR
Sbjct: 480 FNPGESGSEVAEEFDSNVESSSDSDAGSGGGKGGSGSDSGSEKREKPKKEKKEKKSRSAK 539
Query: 525 TISE----KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS 580
T+ E KPR+ KK+ +D N PK+P SAY +W + REKIKKDNPG S
Sbjct: 540 TVKEPGMRKPRRPKKE------------RDANKPKRPPSAYFLWLAENREKIKKDNPGFS 587
Query: 581 FTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGG--QDSDDGKTSKS 638
T++ K+ GELWK V+ K K ++E+ +A Y EA+ AY+ S Q+SDD K K
Sbjct: 588 ITDVTKRAGELWKEVTDKSK--WEEQAAEAAAKYKEAMAAYQASQKDRPQESDDEKEQKK 645
Query: 639 KKPAKKKETAS---TAVSPHK--VKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAK 693
K + A SP K KSKE+I S+GSS D DD K K DS + S +
Sbjct: 646 SVKKSKPSSTPKPKPASSPIKGNFKSKEYISSSGSSDDDDDKSKKVKKEPADSPKSSPNR 705
Query: 694 TKKKKEKSESESDSGESEKEKKSKS 718
K + E+ S S SE E S S
Sbjct: 706 VKSEDEEEASASTPASSEDENMSGS 730
>gi|328711181|ref|XP_001944747.2| PREDICTED: FACT complex subunit Ssrp1-like [Acyrthosiphon pisum]
Length = 593
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/568 (62%), Positives = 443/568 (77%), Gaps = 21/568 (3%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQI-NGPDLDFVNWQKLVGTWALR 63
LEFQ+V +E +G +C G+LK T+QNIVFKN KTGKVEQ+ D++FVNWQK V T +R
Sbjct: 3 LEFQDVLAEVKGIMCTGRLKFTEQNIVFKNVKTGKVEQLLTSSDIEFVNWQKFVDTCGMR 62
Query: 64 IFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDV 123
IFLKNG+LHR+ GF E++ DKI +FK +++D+ EKEL+++GWNWG TKF G++LSFD+
Sbjct: 63 IFLKNGNLHRYCGFNESDQDKIAKYFKNTYRLDMLEKELAIKGWNWGSTKFNGSILSFDI 122
Query: 124 NNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFK 183
N TAFEIPL +VSQCTTG+NEVT+E+H NDE SL EMRF+IP+ E+AGD DPV+AF
Sbjct: 123 GNLTAFEIPLNNVSQCTTGRNEVTLEYHQNDETPVSLCEMRFHIPSAELAGDQDPVDAFH 182
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
D VM QASVI+ +GDAIA+F E+QCLTPRGRYDIK+F +FFQLHGKTFDYKIP++TVL +
Sbjct: 183 DQVMKQASVISISGDAIAIFREMQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMNTVLCL 242
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F LPHKDGRQ FFV+SLD PIKQGQT YH+L LLFN +E + +ELPF+++E++ KY GKL
Sbjct: 243 FILPHKDGRQIFFVVSLDLPIKQGQTSYHYLVLLFNMEEETSIELPFTDEEIEAKYAGKL 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
KE+SGPTYEV+A++MK IVNRKIT P SF+GH+GTSA+ CSYKAAAGY+YPLERGF ++
Sbjct: 303 TKEISGPTYEVLAQVMKAIVNRKITTPASFKGHSGTSAIGCSYKAAAGYVYPLERGFFYL 362
Query: 364 HKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKK 423
HKPPIHIRFEEI TVNFAR GGSTRSFDFEIELK+GV HTFSSIEKEEYG L+DFI KK
Sbjct: 363 HKPPIHIRFEEIFTVNFARGGGSTRSFDFEIELKNGVKHTFSSIEKEEYGSLYDFINAKK 422
Query: 424 LRVKNTGKGEKPNYKED-FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNP 482
LRVKNTGK +KP Y D +G SD + +PD YLARVKRE ++ +++D+ +DEDFNP
Sbjct: 423 LRVKNTGKSDKPAYTGDNYGDSDKKVKPDIYLARVKREG-----QERDEDDDDSDEDFNP 477
Query: 483 DQAESDVAEEYDSNPTPTDSDEDSDASEG-------TKKKKKEKSRKTITISEKPRKSKK 535
+ ESDV EE+D NP+ T+S+ +++ G K KK KS KTI KSK+
Sbjct: 478 EGQESDVTEEFDRNPSTTESESENEERGGGDKKKEKKLKDKKPKSAKTIKYEGNAAKSKQ 537
Query: 536 DK-------ESSGGSTKRKKKDKNAPKK 556
+ SGG T+ ++ K P +
Sbjct: 538 EYIEAMKKFRESGGGTESSRESKKPPSQ 565
>gi|241632349|ref|XP_002410341.1| structure-specific recognition protein, putative [Ixodes
scapularis]
gi|215503398|gb|EEC12892.1| structure-specific recognition protein, putative [Ixodes
scapularis]
Length = 730
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/728 (51%), Positives = 527/728 (72%), Gaps = 32/728 (4%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE+ +V E RGA+ G+LK+T+Q +VFKN KTGKVEQ+ GPD++ ++WQ+L + LRI
Sbjct: 4 LEYPDVFKEDRGAMTSGRLKMTNQAVVFKNSKTGKVEQVQGPDIESIDWQRLGAGYGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+KNG+++RF GF++ E D++ FFK +F++ + ++L ++GWNWG +F G+VLSFD++
Sbjct: 64 MMKNGTMYRFGGFQDDEQDRLAKFFKHHFEMPLGTRDLCLKGWNWGTARFEGSVLSFDID 123
Query: 125 N-TTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFK 183
+ ++A+EIPL +VS CTT KNEVT+EFH ND+AA SL+E+RF++PT+ + DTDP++AF+
Sbjct: 124 SKSSAYEIPLGNVSHCTTAKNEVTLEFHQNDDAAVSLMELRFHVPTDPNS-DTDPIQAFR 182
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
++V+++A++I ATG+++ F E+QCLTPRGRYDIKIF SF QLHGKTFDYKIP++TVLR+
Sbjct: 183 NNVLSKANIIQATGESMVTFKELQCLTPRGRYDIKIFPSFIQLHGKTFDYKIPLTTVLRL 242
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F LPHKD RQ FFV+SLDPPIKQGQTRYHFL LLFN++E + +EL SE+++++K+E K+
Sbjct: 243 FLLPHKDTRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEETSIELTMSEEDIRDKFEDKI 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
K +SGPT+EV++++MK +V RKITVPG+F GH GT+ +TCSY+A G +YPLERGFI+I
Sbjct: 303 QKNMSGPTFEVISRVMKAVVQRKITVPGNFTGHGGTNCITCSYRAGNGLLYPLERGFIYI 362
Query: 364 HKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKK 423
HKPP+H+RF+EIA VNFARSGGSTRSFDFE+E KSG++HTFSSIEKEEYG+LFD++ +KK
Sbjct: 363 HKPPVHLRFDEIACVNFARSGGSTRSFDFEVEAKSGLVHTFSSIEKEEYGRLFDYVSDKK 422
Query: 424 LRVKNTGK-----GEKPNYK-EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTD 477
LR+KN G EKPNY +D SD E PDAYLARVK E +R D+ D DES+D
Sbjct: 423 LRIKNRGSLGNTTKEKPNYNDDDLVDSDAEDAPDAYLARVKDEGRQR---DEGDSDESSD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP ++ S+VAEE+DSN + SD+ EG +K+ + +K + +K +
Sbjct: 480 ESFNPGESGSEVAEEFDSN-----VSDSSDSEEGGEKEAGGDGEEKPKKEKKSKSAKTVR 534
Query: 538 ESSGGSTKRKK----KDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWK 593
E G +R+K +D+N PK+ SAY +W + RE+IK+DNPG T+I K+ GELWK
Sbjct: 535 EPGMGPPRRRKPKKERDENKPKRAPSAYFLWLAENREQIKRDNPGFGITDITKRAGELWK 594
Query: 594 TVSSKEKAEYDEKVNKAKEDYNEALKAY-----KESGGGQDSDDGKTSKSKKPAKKKETA 648
TV+ + K ++E KA +Y EA+ AY K++G D + + + KK ++
Sbjct: 595 TVTDRSK--WEEAAAKAAAEYKEAMAAYNATRGKKAGSSGDEKEEEGGEEKKKKAPRKRK 652
Query: 649 STAVSPHKVKSKEFIESNGSSSDSD---DDKKASSKRKRDSD--EDSKAKTKKKKEKSES 703
A KSKEFIES+GSSSD + +DKKA S + S S A++ K ++S
Sbjct: 653 EAASGGGSFKSKEFIESSGSSSDEEVKKEDKKAKSPSPQRSSPARSSPARSSPTKSPAKS 712
Query: 704 ESDSGESE 711
SG+ E
Sbjct: 713 SIKSGDEE 720
>gi|195586162|ref|XP_002082847.1| GD25013 [Drosophila simulans]
gi|194194856|gb|EDX08432.1| GD25013 [Drosophila simulans]
Length = 689
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/696 (53%), Positives = 494/696 (70%), Gaps = 46/696 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K G LHRF GF+++E +K+ F KT + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKGGVLHRFTGFRDSEHEKLGKFIKTAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E A + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDF 480
+KKL + E DD+D + ++ESTDEDF
Sbjct: 420 QKKLHAEAR-------------------------------EKEEDDDDGDSDEESTDEDF 448
Query: 481 NPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESS 540
P++ ESDVAEEYDSN ++ + G +K ++ + ++ ++ K ++
Sbjct: 449 KPNENESDVAEEYDSNVESDSDEDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKEKER 508
Query: 541 GGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
+KKKD PK+ +A+M+W ND RE IK++NPGI TEIAKKGGE+WK + K+K
Sbjct: 509 TKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL--KDK 566
Query: 601 AEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK-----PAKKKETASTAVSPH 655
+++++ K K+ Y++ ++ YK GG D + G S K+ P+KK T+ +
Sbjct: 567 SKWEDAAAKDKQRYHDEMRNYKPEAGGSDDEKGGKSSKKRKTEPSPSKKANTSGSG---- 622
Query: 656 KVKSKEFIESNGSSSDSD--DDKKASSKRKRDSDED 689
KSKE+I + S+S D D++ A K K SD D
Sbjct: 623 -FKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 657
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/635 (53%), Positives = 465/635 (73%), Gaps = 18/635 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + EIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVLEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P+Y +D+ SD E + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGMNPSY-DDYADSD-EDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+K+ K K K RKS+K
Sbjct: 478 TDESFNPGEEEDDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMA----KDRKSRK 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 K-----SSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDS 630
S ++K E+D K A+ +Y +A+K Y E G G+ S
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESS 622
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/720 (50%), Positives = 498/720 (69%), Gaps = 26/720 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ + +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNVQAGELTEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMSEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + E DVAEE+DSN + + S + D+ KK+K+ K K K RKS+K
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMT----KDRKSRKKT 535
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+ +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 536 VEA-----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST------- 650
++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K + ST
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKAKMDKKSTPSRGSSS 649
Query: 651 ----AVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESD 706
KSKEF+ S+ SSS + KK +R DS+++ A T E S S SD
Sbjct: 650 KSSSRQLSESFKSKEFVSSDESSSGENKTKK-KRRRSEDSEDEELASTPPSSEDSASGSD 708
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/723 (51%), Positives = 501/723 (69%), Gaps = 33/723 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P Y +D+ S DE + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGINPGY-DDYADS-DEDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+++ K K K RKS++
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMA----KDRKSRR 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 K-----SSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
S ++K E+D K A+ +Y +A+K Y E G G S K+ K KK K E ST
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRGDSSKRDKSKKKKKVKAKMEKKSTPSRGS 647
Query: 656 K-----------VKSKEFIESNGSSSDSDDDKKASSKRKRDSD-EDSKAKTKKKKEKSES 703
KSKEF+ S+ SSS + KK KR+R D E+ A T E S S
Sbjct: 648 SSKSSSRQLSDSFKSKEFVSSDESSSGENKSKK---KRRRSEDSEEELASTPPSSEDSAS 704
Query: 704 ESD 706
SD
Sbjct: 705 GSD 707
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/722 (51%), Positives = 501/722 (69%), Gaps = 30/722 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P Y +D+ SD E + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGINPGY-DDYADSD-EDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+K+ K K K RKS+K
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMA----KDRKSRK 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 KS-----SEGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
S ++K E+D K A+ +Y +A+K Y E G G S K+ K KK K E ST
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRGDSSKRDKSKKKKKVKAKLEKKSTPSRGS 647
Query: 656 K-----------VKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESE 704
KSKEF+ S+ SSS + KK +R DSDE+ A T E S S
Sbjct: 648 SSKSSSRQLSDSFKSKEFVSSDESSSGENKSKK-KRRRSEDSDEEELASTPPSSEDSASG 706
Query: 705 SD 706
SD
Sbjct: 707 SD 708
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/624 (53%), Positives = 451/624 (72%), Gaps = 15/624 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L+++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E DK+ FFK ++++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ESTD 477
KKL +KN G E D + DE + DAYL R+K E R++ ++ D E TD
Sbjct: 420 AKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + + DVAEE+DSN + + S D D+ G KK K + I KPR KK
Sbjct: 480 ESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK---KAKIVKDRKPR--KKQV 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
ES +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GELWK +S
Sbjct: 535 ES------KKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSK 588
Query: 598 KEKAEYDEKVNKAKEDYNEALKAY 621
++K E+D K AK DY +A+K Y
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/624 (53%), Positives = 451/624 (72%), Gaps = 15/624 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L+++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E DK+ FFK ++++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ESTD 477
KKL +KN G E D + DE + DAYL R+K E R++ ++ D E TD
Sbjct: 420 AKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + + DVAEE+DSN + + S D D+ G KK K + I KPR KK
Sbjct: 480 ESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK---KAKIVKDRKPR--KKQV 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
ES +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GELWK +S
Sbjct: 535 ES------KKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSK 588
Query: 598 KEKAEYDEKVNKAKEDYNEALKAY 621
++K E+D K AK DY +A+K Y
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/624 (53%), Positives = 451/624 (72%), Gaps = 15/624 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L+++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E DK+ FFK ++++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ESTD 477
KKL +KN G E D + DE + DAYL R+K E R++ ++ D E TD
Sbjct: 420 AKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + + DVAEE+DSN + + S D D+ G KK K + I KPR KK
Sbjct: 480 ESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK---KAKIVKDRKPR--KKQV 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
ES +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GELWK +S
Sbjct: 535 ES------KKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSK 588
Query: 598 KEKAEYDEKVNKAKEDYNEALKAY 621
++K E+D K AK DY +A+K Y
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/709 (49%), Positives = 486/709 (68%), Gaps = 27/709 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ + +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNVQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-IDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EIA VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD---DEDDEDEDESTD 477
KKL +KN G E N D + DE + DAYL R+K E R+ ++ ED E TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSEDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + E DVAEE+DSN + + S + D++ K++K+ K K K RKS+K
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSAREEKRRKQLKRAKVA----KDRKSRKKT 535
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+ +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 536 VEA-----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMPK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDS------------DDGKTSKSKKPAKKK 645
++K E+D K A+ +Y +A+K Y E G G+ S +
Sbjct: 591 EKKEEWDHKAEDARREYEKAMKEY-EGGRGEPSKRDKSKKKKKVKAKMDKKSTPSRGSSS 649
Query: 646 ETASTAVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKT 694
+S+ KSKEF+ S+ SSS + KK +R DS+E+ A T
Sbjct: 650 SKSSSRQLSESFKSKEFVSSDESSSGENKSKK-KRRRSEDSEEEDLAST 697
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/633 (53%), Positives = 457/633 (72%), Gaps = 13/633 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG +++ GF+E+E +K+ FFK+++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHFYKYDGFRESEFEKLADFFKSHYRLELVEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEDEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGINPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGDETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP E DVAEE+DSN + + S + D+ KKKK K K + K RKS+K K
Sbjct: 480 ESFNPGDEEDDVAEEFDSNASASSSSNEGDSDRDEKKKKLAKKAKIV----KERKSRK-K 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
G +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 535 PVEG----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDS 630
+K E+D K +AK +Y +A+K Y E G + S
Sbjct: 591 DKKEEWDRKAEEAKREYEKAMKEYSEGGRAESS 623
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/633 (53%), Positives = 458/633 (72%), Gaps = 13/633 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG +++ GF+E+E +K+ FFK+++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHFYKYDGFRESEFEKLSDFFKSHYRLELVEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEDEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGINPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGDETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP E DVAEE+DSN + + S + D+ KKKK K K + K RKS+K K
Sbjct: 480 ESFNPGDEEDDVAEEFDSNASASSSSNEGDSDRDEKKKKLAKKAKIV----KERKSRK-K 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
G +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 535 PVEG----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDS 630
++K E+D K +AK +Y +A+K Y E G + S
Sbjct: 591 EKKEEWDRKAEEAKREYEKAMKEYSEGGRAESS 623
>gi|195347200|ref|XP_002040142.1| GM15512 [Drosophila sechellia]
gi|194135491|gb|EDW57007.1| GM15512 [Drosophila sechellia]
Length = 697
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/499 (65%), Positives = 411/499 (82%), Gaps = 5/499 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++LE+ ++++E RG LC G+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW
Sbjct: 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTW 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+F K G LHRF GF+++E +K+ F KT + ++ EKE+ V+GWNWG +F+G+VLS
Sbjct: 61 GLRVFTKGGVLHRFTGFRDSEHEKLGKFIKTAYSQEMVEKEMCVKGWNWGTARFMGSVLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD + T FE+PL VSQC TGKNEVT+EFH ND+A L+EMRF+IP E + + DPV+
Sbjct: 121 FDKESKTIFEVPLSHVSQCVTGKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVD 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F +VM++ASVI+A+G++IA+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +V
Sbjct: 180 KFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFV+SLDPPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYE
Sbjct: 240 LRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+KE+SGP YEVM K+MKV++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGF
Sbjct: 300 GKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I+IHKPP+HIRFEEI++VNFARSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I
Sbjct: 360 IYIHKPPLHIRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYIT 419
Query: 421 EKKLRVKNTGKGEKPNYKE-DFGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTD 477
+KKL V N GK +K YK+ DFG SD+E EPDAYLAR+K E DD+D + ++ESTD
Sbjct: 420 QKKLHVSNMGK-DKSGYKDVDFGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTD 478
Query: 478 EDFNPDQAESDVAEEYDSN 496
EDF P++ ESDVAEEYDSN
Sbjct: 479 EDFKPNENESDVAEEYDSN 497
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/648 (53%), Positives = 468/648 (72%), Gaps = 15/648 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L W+++
Sbjct: 1 MGDTLEFNEIYHESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSVATWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ NG ++++ GF++T+ ++I FFK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLATSNGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDVN+++ FEIPL VSQC TGKNEVT+EFH ND+A SL+E+RFY+P TDPVE
Sbjct: 121 FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGTADEGTDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V ++A VI ATGDA+ VF E+QCLTPRGRYDI I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVRSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LP KD RQ FFVISLDPPIKQGQTRYHFL L F+++E ++ L SE+E++++YE
Sbjct: 241 LRLFLLPSKDQRQMFFVISLDPPIKQGQTRYHFLILHFSKEEELKLTLNMSEEEVEKRYE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHT-GTSAVTCSYKAAAGYIYPLERG 359
GKL K +SG YE+++++MK +VNRKITVPG+F+G+T G +TCSYKA +G +YPLERG
Sbjct: 301 GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG 360
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
FI++HKPP+H+RFEEI++VNFAR +TRSFDFE+E K G TFSSIE+EEYGKLFDF+
Sbjct: 361 FIYVHKPPVHLRFEEISSVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV 420
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED-DEDEDESTDE 478
KKL +KN G E N ++ SDD++ DAYL R+K E R++ D D DE TDE
Sbjct: 421 NAKKLHIKNRGFKEAKN--NEYSDSDDDQH-DAYLERMKAEGKIREEGDGSNDSDEETDE 477
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
FNP + ESDVAEEYDSN + +DS D S+ KKKK + + +K RK +++K
Sbjct: 478 SFNPGE-ESDVAEEYDSNASESDSGSGGDGSDDEGKKKKPAKKAKVVKEKKERKPRREK- 535
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
K+KD NAPK+PMS+YM+W N RE+IK +NPGIS TEI+KK GE+WK + +
Sbjct: 536 --------KQKDTNAPKRPMSSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKE 587
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKE 646
+K E+D K +AK++Y +A+K Y+ESGGG + K SK K KK++
Sbjct: 588 DKEEWDGKAEEAKKNYEKAMKEYRESGGGSSTPAKKESKKKAGGKKED 635
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/726 (50%), Positives = 496/726 (68%), Gaps = 38/726 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPT 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEK 700
KSKEF+ S+ SSS + KK +R DS+E+ A T E
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK-KRRRSEDSEEEDLASTPPSSED 702
Query: 701 SESESD 706
S S SD
Sbjct: 703 SGSASD 708
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/624 (53%), Positives = 451/624 (72%), Gaps = 15/624 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L+++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E DK+ FFK ++++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ESTD 477
KKL +KN G E D + DE + DAYL R+K E R++ ++ D E TD
Sbjct: 420 AKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + + DVAEE+DSN + + S D D+ + KK K + + KPR KK
Sbjct: 480 ESFNPGEEDDDVAEEFDSNASASSSSGDGDSDQDEKKPAK---KAKLVKDRKPR--KKQP 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
ES +K KD NAPK+PMSAYM+W N RE+IK D+PGIS T+++KK GELWK +S
Sbjct: 535 ES------KKGKDPNAPKRPMSAYMLWLNASRERIKSDHPGISITDLSKKAGELWKAMSK 588
Query: 598 KEKAEYDEKVNKAKEDYNEALKAY 621
++K E+D K A+ DY +A+K Y
Sbjct: 589 EKKEEWDRKAEDARRDYEKAMKEY 612
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/632 (53%), Positives = 463/632 (73%), Gaps = 18/632 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P Y +D+ S DE + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGINPGY-DDYADS-DEDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+++ K K K RKS++
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKM----AKDRKSRR 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 K-----SSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGG 627
S ++K E+D K A+ +Y +A+K Y E G G
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRG 619
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/628 (54%), Positives = 462/628 (73%), Gaps = 6/628 (0%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M++ EF EV E RGAL PG+LK+ +I+FKN KTGK++Q G D++ V+W K
Sbjct: 1 MSDFQEFPEVVQEVRGALNPGRLKLQSNSIIFKNNKTGKIDQYPGTDVEKVHWLKRARGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L+ L NG++HR+ GFKE E +K+ +F + + + +K+LSV+GWNWG F GN L
Sbjct: 61 CLKFLLSNGTIHRYDGFKEGEFEKLAAFISKYYMVSLEKKDLSVKGWNWGIAHFTGNALE 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDV+N FE+PL VS TT K EVT+EFHPND+AA SL+E+RF+IP + + D V+
Sbjct: 121 FDVDNKIGFEVPLSHVSHTTTAKQEVTLEFHPNDDAAVSLMELRFHIPPDPKDTEKDLVQ 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F ++V+ +A +I ATGDA+AVF E+QCLTPRGRYD K++N+F QLHGKTFDYKIP +TV
Sbjct: 181 EFYNNVLEKADIIQATGDALAVFTEVQCLTPRGRYDFKMYNTFLQLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKDGRQ FFVISLDPPIKQGQTRYHF LLFN D+ +EL S+++L+EKY+
Sbjct: 241 LRLFLLPHKDGRQMFFVISLDPPIKQGQTRYHFCILLFNIDDEMSIELGISDEDLQEKYD 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
KL KE+SG YEV++++ K + NRKITVPGSF +T + +++CSYKAA G++YPLERGF
Sbjct: 301 NKLQKEMSGAEYEVISRVFKAVTNRKITVPGSFFSNTKSHSISCSYKAATGFLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
IF+HKPPIHIRF+E+ TVNFARS G+ RSFDF++E KSG +TF IEK+EYGKL+DF+
Sbjct: 361 IFVHKPPIHIRFDEVVTVNFARSAGTNRSFDFDVETKSGTTYTFVGIEKDEYGKLYDFVS 420
Query: 421 EKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED 479
KKLRVKN GKG+K Y++D SD+E DAYL R+K E +R D++D+ +S+DE
Sbjct: 421 SKKLRVKNINGKGDKAPYRDDMSGSDEEDNHDAYLERMKAEGKDRQSGDEDDDSDSSDES 480
Query: 480 FNPDQAESDVAEEYDSN-PTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
+NP+++ SDVAEEYDSN PT + + E D+S G+ ++K+K RK +K R +K +E
Sbjct: 481 YNPNESASDVAEEYDSNPPTTSSNSESGDSSGGSGDEEKQKKRKEKAEKKKSRSAKTVRE 540
Query: 539 SSGGS----TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKT 594
GS K+ KKD NAPK+P SAY +WFN RE++KKD P IS T+++KK GE+WK
Sbjct: 541 KLPGSEKKKKKKSKKDPNAPKRPQSAYFLWFNANREELKKDTPDISITDLSKKAGEVWKQ 600
Query: 595 VSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+ +K E++EK +AK++Y +A++ YK
Sbjct: 601 MEDTDKTEWNEKAAEAKKEYEKAMEEYK 628
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/699 (51%), Positives = 488/699 (69%), Gaps = 41/699 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++D+ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLDLMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P+Y +D+ SD+++ DAYL R+K E R++ ++ D+S
Sbjct: 420 VKKLNIKNRGLKEGMNPSY-DDYADSDEDQH-DAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEK 529
TDE FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +K
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKK 534
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P + KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 535 PTEVKKG------------KDPNAPKRPMSAYMLWLNASREKIKLDHPGISITDLSKKAG 582
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAS 649
E+WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E S
Sbjct: 583 EIWKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKS 641
Query: 650 T-----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
T KSKEF+ S+ SSS + KK
Sbjct: 642 TPSRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/632 (53%), Positives = 463/632 (73%), Gaps = 18/632 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P Y +D+ S DE + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGINPGY-DDYADS-DEDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+++ K K K RKS++
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKM----AKDRKSRR 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 K-----SSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGG 627
S ++K E+D K A+ +Y +A+K Y E G G
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRG 619
>gi|4507241|ref|NP_003137.1| FACT complex subunit SSRP1 [Homo sapiens]
gi|397512296|ref|XP_003826485.1| PREDICTED: FACT complex subunit SSRP1 [Pan paniscus]
gi|426368405|ref|XP_004051198.1| PREDICTED: FACT complex subunit SSRP1 [Gorilla gorilla gorilla]
gi|730840|sp|Q08945.1|SSRP1_HUMAN RecName: Full=FACT complex subunit SSRP1; AltName:
Full=Chromatin-specific transcription elongation factor
80 kDa subunit; AltName: Full=Facilitates chromatin
transcription complex 80 kDa subunit; Short=FACT 80 kDa
subunit; Short=FACTp80; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; Short=hSSRP1; AltName: Full=T160
gi|184242|gb|AAA58660.1| high mobility group box [Homo sapiens]
gi|13477285|gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens]
gi|119594140|gb|EAW73734.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|119594141|gb|EAW73735.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|123993967|gb|ABM84585.1| structure specific recognition protein 1 [synthetic construct]
gi|123998313|gb|ABM86758.1| structure specific recognition protein 1 [synthetic construct]
gi|410226712|gb|JAA10575.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410226714|gb|JAA10576.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262712|gb|JAA19322.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262714|gb|JAA19323.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305268|gb|JAA31234.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305270|gb|JAA31235.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351021|gb|JAA42114.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351025|gb|JAA42116.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 709
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ DY +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|332252411|ref|XP_003275348.1| PREDICTED: FACT complex subunit SSRP1 [Nomascus leucogenys]
Length = 709
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ DY +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSSSKQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/639 (53%), Positives = 463/639 (72%), Gaps = 30/639 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLADFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P+Y +D+ SD E + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGMNPSY-DDYADSD-EDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEK 529
TDE FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +K
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKK 534
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P + KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 535 PMEVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAG 582
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
E+WK +S ++K E+D K A+ +Y +A+K Y E G G+
Sbjct: 583 EIWKAMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGE 620
>gi|297688746|ref|XP_002821837.1| PREDICTED: FACT complex subunit SSRP1 isoform 2 [Pongo abelii]
Length = 709
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTA 651
WK +S ++K E+D K A+ DY +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 652 VS-----------PHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKLSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|326664195|ref|XP_001923156.2| PREDICTED: FACT complex subunit SSRP1 [Danio rerio]
Length = 713
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/631 (51%), Positives = 446/631 (70%), Gaps = 27/631 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M++ LEF E+ E +G+ G+L+ + Q +V+KN KTGKV+ I P+L W+++
Sbjct: 1 MSDTLEFNEIYQEVKGSWNDGRLRFSKQTVVYKNSKTGKVDTIPVPELTQAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
++++ G ++++ GFK+ +++KI +FK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLWTSTGHIYKYDGFKDADLEKISEYFKDNYKVELTEKDMCVKGWNWGTAKFNGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDVN++ FEIPL VSQCTTGKNEVTVEFH ND+ SL+E+RFY+P +DPVE
Sbjct: 121 FDVNDSPTFEIPLSSVSQCTTGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++ET + L +E E++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEETISLTLNMNEDEVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEIA VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES-TDED 479
KKL +KN G E +D S DE + DAYL R+K E R++ +D D+ E +DE
Sbjct: 421 AKKLSIKNRGFKEGMKGNDDMYSDSDEDQHDAYLERMKEEGKIREEGNDSDDSEGESDES 480
Query: 480 FNPDQAESDVAEEYDSNPTPT-------DSDEDSDASEGTKKKKKEKSRKTITISEKPRK 532
FNP + + D+AEEYDS + + DSDED K K ++ +
Sbjct: 481 FNPGEEDEDIAEEYDSKASASESSAEEGDSDEDRKKKSAKKVKFVKERKPR--------- 531
Query: 533 SKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELW 592
++K KD APK+PMSAYM+W N R++IK +NPGIS TEI+KK GE+W
Sbjct: 532 ----------KKEKKVKDSGAPKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMW 581
Query: 593 KTVSSKEKAEYDEKVNKAKEDYNEALKAYKE 623
K + +K E+D K +AK++Y+ A++ Y+E
Sbjct: 582 KQLGKDKKEEWDGKAEEAKKEYDRAMREYRE 612
>gi|395858039|ref|XP_003801382.1| PREDICTED: FACT complex subunit SSRP1 [Otolemur garnettii]
Length = 710
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/637 (52%), Positives = 459/637 (72%), Gaps = 26/637 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q+I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQSIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLVRMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMSKDRKS---RKKPM 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK + D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGR------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
WK +S ++K E+D K A+ +Y +A+K Y E G G+
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGE 620
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/699 (51%), Positives = 488/699 (69%), Gaps = 41/699 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P+Y +D+ SD+++ DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGMNPSY-DDYADSDEDQH-DAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEK 529
TDE FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +K
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKERKS---RKK 534
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P + KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 535 PMEVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAG 582
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAS 649
E+WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E S
Sbjct: 583 EIWKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKS 641
Query: 650 T-----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
T KSKEF+ S+ SSS + KK
Sbjct: 642 TPSRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/697 (51%), Positives = 483/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKTEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + +KK
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKNKK 680
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/634 (53%), Positives = 454/634 (71%), Gaps = 18/634 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLNRQGVIFKNSKTGKVDNIQASELAEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ K G ++++ GF+ETE DK+ FFKT+F +++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKGGHVYKYDGFRETEFDKLADFFKTHFHLELAEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FE+PL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFELPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEDEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EIA VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGE-KPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD---EDEDEST 476
KKL +KN G E N D + DE DAYL R+K E R++ + ED E T
Sbjct: 420 AKKLNIKNRGLKEGMKNMPYDEYAGSDEDTHDAYLERMKEEGKIREEHANDSSEDSGEET 479
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DE FNP + E DVAEE+DSN + + S + D+ E KKK + I KPRK
Sbjct: 480 DESFNPVEEEEDVAEEFDSNASASSSSNEGDSDE----KKKPAKKAKIVKERKPRK---- 531
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
++S G +K KD NAPK+P+SAYM+W N R+KI+ ++PG+S T+++KK GELWK +S
Sbjct: 532 RQSEG----KKGKDPNAPKRPLSAYMLWLNANRDKIRSESPGMSVTDVSKKAGELWKAMS 587
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDS 630
++K E+D K AK DY +A+K Y E GG DS
Sbjct: 588 KEKKEEWDRKAEDAKRDYEKAMKEYNE-GGKSDS 620
>gi|410351023|gb|JAA42115.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 712
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/702 (51%), Positives = 485/702 (69%), Gaps = 44/702 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEK-----PNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES 475
KKL +KN G EK P+Y E + DE + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEKKEGMNPSYDE--YADSDEDQHDAYLERMKEEGKIREENANDSSDDS 477
Query: 476 ---TDEDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITI 526
TDE FNP + E DVAEE+DSN + + DSD D + KK K K RK+
Sbjct: 478 GEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS--- 534
Query: 527 SEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAK 586
+KP + KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++K
Sbjct: 535 RKKPVEVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSK 582
Query: 587 KGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKE 646
K GE+WK +S ++K E+D K A+ DY +A+K Y E G G+ S K+ K KK K E
Sbjct: 583 KAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKME 641
Query: 647 TAST-----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
ST KSKEF+ S+ SSS + KK
Sbjct: 642 KKSTPSRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 683
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/718 (51%), Positives = 504/718 (70%), Gaps = 23/718 (3%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
+ LEF ++ E +GA+ G+L+I+ Q IVFKN KTGKV+ ++G DL+ +W ++ + L
Sbjct: 1 DTLEFDQIYQENKGAMYDGRLRISKQGIVFKNNKTGKVDNLSGTDLNLTHWFRVARGYEL 60
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
++ LK+G++ ++ GFKE++ DK+ F N+K+ + EKELSV+GWNWG KF G +LSFD
Sbjct: 61 KVGLKSGAVFKYDGFKESDFDKLSDFINKNYKMRLEEKELSVKGWNWGTAKFKGPLLSFD 120
Query: 123 VNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAF 182
++N +AFEIPL +VS C T KNEV +EFH ND+A SL+EMRFY+P N+ D DPV+AF
Sbjct: 121 IDNMSAFEIPLGNVSHCATSKNEVALEFHQNDDADVSLMEMRFYVPPNQDNPDVDPVQAF 180
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
D+VM++A +I ATGDAI +F E+QCLTPRGRYD++I+ +F LHGKTFDYK+P +TVLR
Sbjct: 181 HDNVMDKADIIQATGDAICIFKELQCLTPRGRYDVRIYPTFLHLHGKTFDYKLPYTTVLR 240
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F LPHKD RQ FFV+SLDPPIKQGQTRYHFL L F+++E +EL SE++ +K+EGK
Sbjct: 241 LFLLPHKDQRQMFFVVSLDPPIKQGQTRYHFLILQFSKEEDMTLELSLSEEDCADKFEGK 300
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L KE+SGP YE+++++MK +VNRKITVPGSF+G++GTSAV+CS+KA AG++YPLERGFI+
Sbjct: 301 LQKEMSGPVYEIVSRVMKSMVNRKITVPGSFKGNSGTSAVSCSHKAGAGFLYPLERGFIY 360
Query: 363 IHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREK 422
+HKPPIH+RF+EI+ VNFAR S R+FDFEIE KSG +TFSSIEKEEYGKLFDF K
Sbjct: 361 VHKPPIHLRFDEISCVNFARGVASNRTFDFEIETKSGTTYTFSSIEKEEYGKLFDFTTNK 420
Query: 423 KLRVKNTGKGEK--PNYKEDFGSSDDEKEPDAYLARVKREAAER-DDEDDEDEDESTDED 479
KLRVKN GK K NY ED SDDE + DAY+ RVK EAAE D+D+ +DE D D
Sbjct: 421 KLRVKNRGKNLKDSVNYDEDMMGSDDEGQHDAYMERVKAEAAEGISDDDESSDDEEEDAD 480
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
FNPD + SD+AEEYDSN + + SDED + E +++KK+ + +++ R SK
Sbjct: 481 FNPDGSGSDLAEEYDSNASISSSDEDEEDEEKKERRKKKLEKAKSKPAKRRRTSK----- 535
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
KR+KKD NAPKK M+A+M+W N R +++K+NP S EI K GE W+ + +
Sbjct: 536 ---RKKRQKKDPNAPKKAMTAFMLWLNATRSELRKENPDASIGEIGKIAGEKWREMGPSD 592
Query: 600 KAEYDEKVNKAKEDYNEALKAYK-----ESGGGQDSDDGKTSKSKKPAKKKETASTAVSP 654
K E+++K + KE Y A++ Y+ E + D K+KK + S SP
Sbjct: 593 KEEWEQKAKEDKERYKAAMEEYQARKEEEGSSEGEESDQAEKKTKKSKSSRPKPSPTKSP 652
Query: 655 HKV------KSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESD 706
K KSKE+I S+ S DSD D+K +K+ D +E+ A T + E+S + D
Sbjct: 653 SKAGAGANYKSKEYITSDSDSDDSDSDRK-KAKKSEDEEEEPIASTPPESEESAGDDD 709
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/680 (50%), Positives = 473/680 (69%), Gaps = 36/680 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G++ G+L+++ +++KN KTGKVE I+ D+ V W+++
Sbjct: 1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF+ETE DK+ +FK++F +++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GIKLLTNGGHVYKYDGFRETEYDKLFDYFKSHFSVELVEKDLCVKGWNWGSVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + AFE+PL +VSQCTTGKNEVT+EFH ND++ SL+E+RFY+P + G D VE
Sbjct: 121 FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGG-DSVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE+E++ ++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F GH+G+ +TCSYKA++G +YPLERGF
Sbjct: 300 GKLKKSMSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEITCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDE 478
KKL +KN G +G KP Y +D+ SD+++ DAYL R+K E R++ D ++ + TDE
Sbjct: 420 AKKLSIKNRGLKEGMKPAY-DDYADSDEDQH-DAYLERMKEEGKIRENADSDESGDETDE 477
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
FNP + E +VAEE+DSNP+ + S S+ KKK+ R I +KPRK + K
Sbjct: 478 SFNPGEEEEEVAEEFDSNPS---ASSSSADSDDDTDKKKDAKRAKIVKQKKPRKKPEAK- 533
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
K KD APK+PMSAYM+W N REKIK +NPGIS T+++KK GE+WK +S
Sbjct: 534 --------KTKDPGAPKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKNMSRD 585
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDS---------------DDGKTSKSKKPAK 643
+K E+D + +AK DY +A+K Y S + S + K K PA+
Sbjct: 586 KKEEWDRRAEEAKRDYEKAMKEYNTSAPTEASKKEKKTKGEKKKAETSEKKKQKPSSPAR 645
Query: 644 KKETASTAVSPHKVKSKEFI 663
A+ ++ KSKEF+
Sbjct: 646 ----AAPKLNSESFKSKEFV 661
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKVEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|403254821|ref|XP_003920153.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 118 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 177
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 178 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 237
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 238 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 296
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 297 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 356
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 357 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 416
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 417 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 476
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 477 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 536
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 537 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 596
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 597 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 653
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 654 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 701
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTA 651
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 702 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKLEKKSTP 760
Query: 652 VS-----------PHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 761 SRGSSSKSSPRQLSESFKSKEFVSSDESSSGENKSKK 797
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/697 (51%), Positives = 482/697 (69%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTA 651
WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 652 VS-----------PHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSASRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/637 (53%), Positives = 458/637 (71%), Gaps = 26/637 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK K D NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKGK------------DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
WK +S ++K E+D K A+ +Y +A+K Y E G G+
Sbjct: 585 WKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGE 620
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/691 (51%), Positives = 483/691 (69%), Gaps = 25/691 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + E DVAEE+DSN + + S + D+ +++K++ + K RKS+K
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSD----REEKKRKQLKKAKMAKDRKSRKKP 535
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 536 LEV-----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST------- 650
++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSS 649
Query: 651 ----AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 650 KSSSRQLSESFKSKEFVSSDESSSGENKGKK 680
>gi|60552474|gb|AAH91486.1| SSRP1 protein, partial [Homo sapiens]
Length = 633
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/637 (53%), Positives = 458/637 (71%), Gaps = 26/637 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
WK +S ++K E+D K A+ DY +A+K Y E G G+
Sbjct: 585 WKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGE 620
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/691 (50%), Positives = 483/691 (69%), Gaps = 25/691 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+++++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEKVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E FNP + E DVAEE+DSN + + S + D+ +++K++ + K RKS+K
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSD----REEKKRKQLKKAKMAKDRKSRKKP 535
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
+K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 536 LEV-----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSK 590
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST------- 650
++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSS 649
Query: 651 ----AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 650 KSSSRQLSESFKSKEFVSSDESSSGENKGKK 680
>gi|345783817|ref|XP_859953.2| PREDICTED: FACT complex subunit SSRP1 isoform 4 [Canis lupus
familiaris]
Length = 711
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/699 (50%), Positives = 477/699 (68%), Gaps = 39/699 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDF 480
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S +E
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETG 479
Query: 481 N-----PDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEK 529
P D+AEE+DSN + + DSD D + KK K K RK+ +K
Sbjct: 480 RLALAVPGHEGRDLAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKK 536
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P + KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 537 PVEVKKG------------KDPNAPKRPMSAYMLWLNASREKIKADHPGISITDLSKKAG 584
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAS 649
E+WK +S ++K E+D K A+ +Y +A+K Y E G G+ S K+ K KK K E S
Sbjct: 585 EIWKGMSKEKKEEWDRKAEDARREYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKS 643
Query: 650 T-----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
T KSKEF+ S+ SSS + KK
Sbjct: 644 TPSRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 682
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/723 (49%), Positives = 493/723 (68%), Gaps = 33/723 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ I+FKN KTGKV+ I +L W ++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSPSGIIFKNSKTGKVDNIQAGELTEGIWPRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VS + EVT+EFH ND+ SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSSVPQARIEVTLEFHQNDDPEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G P Y +D+ SD+++ DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGINPGY-DDYADSDEDQH-DAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
TDE FNP + E DVAEE+DSN + + S + D+ KK+++ K K K RKS++
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMA----KDRKSRR 533
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
S +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 534 K-----SSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGM 588
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
S ++K E+D K A+ +Y +A+K Y E G G S K+ K KK K E ST
Sbjct: 589 SKEKKEEWDRKAEDARREYEKAMKEY-EGGRGDSSKRDKSKKKKKVKAKMEKKSTPSRGS 647
Query: 656 K-----------VKSKEFIESNGSSSDSDDDKKASSKRKRDSD-EDSKAKTKKKKEKSES 703
KSKEF+ S+ SSS + KK KR+R D E+ A T E S S
Sbjct: 648 SSKSSSRQLSDSFKSKEFVSSDESSSGENKSKK---KRRRSEDSEEELASTPPSSEDSAS 704
Query: 704 ESD 706
SD
Sbjct: 705 GSD 707
>gi|348514195|ref|XP_003444626.1| PREDICTED: FACT complex subunit SSRP1-like [Oreochromis niloticus]
Length = 709
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/673 (50%), Positives = 480/673 (71%), Gaps = 20/673 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L+ W+++
Sbjct: 1 MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPASELNLAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++T+ +KI FFK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLGTSTGHVYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F+VN+ TAFE+PL +VSQC TGKNEVT+EFH ND+ SL+E+RFY+P ++ DPVE
Sbjct: 121 FEVNDNTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L SE++++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLSKFMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDE-DESTDED 479
KKL +KN +G K +++ SDD++ DAYL R+K E R++ +D DE D +DE
Sbjct: 421 AKKLNIKN--RGFKEGKIDEYSDSDDDQH-DAYLERMKAEGKIREEGNDSDESDGESDES 477
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
FNP + + ++AEEYDSN + +DS E + SE KKK+ + K+K+
Sbjct: 478 FNPGEEDEEIAEEYDSNASASDSSEGGEESEDESAKKKKAKKAK---------VVKEKKE 528
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
++K+KD PK+PMSAYM+W N RE+IK +NPGIS TEI+KK GE+W+ +S E
Sbjct: 529 RKPRKEKKQKDAGGPKRPMSAYMLWLNSSRERIKSENPGISVTEISKKAGEMWRQLSKDE 588
Query: 600 KAEYDEKVNKAKEDYNEALKAYKESGGGQDS--DDGKTSKSKKPAKKKETASTAVSPHK- 656
K E++ K +AK+ Y++A K YKESGG S + K S +KK KK+++A +
Sbjct: 589 KQEWEAKAGEAKKQYDKAKKEYKESGGATSSPRKESKKSGAKKDDKKRKSAGADKDRERG 648
Query: 657 ----VKSKEFIES 665
KS+EFIE+
Sbjct: 649 GNDSFKSREFIET 661
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/632 (51%), Positives = 446/632 (70%), Gaps = 21/632 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED- 479
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S +E
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETG 479
Query: 480 -FNP--DQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
P D D S+ DSD D + KK K K RK+ +KP + KK
Sbjct: 480 RLAPELDVGWFDSNASASSSSNEGDSDRDEKKRKQLKKAKIAKDRKS---RKKPVEVKKG 536
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S
Sbjct: 537 ------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMS 584
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
++K E+D K A+ +Y +A+K Y E G G+
Sbjct: 585 KEKKEEWDRKAEDARREYEKAMKEY-EGGRGE 615
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/626 (51%), Positives = 457/626 (73%), Gaps = 17/626 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G++ G+L+++ +++KN KTGKVE I+ D+ V W+++
Sbjct: 1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++TE DK+ +FK++F++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GIKLLTNGGHVYKYDGFRDTEYDKLFDYFKSHFRVELVEKDLCVKGWNWGSVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + AFE+PL +VSQCTTGKNEVT+EFH ND++ SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGG-DPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE+E++ ++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F+GH+G+ +TCSYKA++G +YPLERGF
Sbjct: 300 GKLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+E+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDE 478
KKL +KN G +G KP Y +D+ SD+++ DAYL R+K E R++ D ++ + TDE
Sbjct: 420 AKKLSIKNRGLKEGMKPAY-DDYADSDEDQH-DAYLERMKEEGKIRENADSDESGDETDE 477
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
FNP + E +VAEE+DSNP+ + S DSD KK+ K K+K+
Sbjct: 478 SFNPGEEEDEVAEEFDSNPSASSSSADSDDDAEKKKEAKRAK------------IVKEKK 525
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
+K KD +APK+PMSAYM+W N REKIK +NPGIS T+++KK GE+WK++S
Sbjct: 526 PRKKKESKKTKDPSAPKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKD 585
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKES 624
+K E+D + +AK DY +A+K Y S
Sbjct: 586 KKEEWDRRAEEAKRDYEKAMKEYNSS 611
>gi|410057780|ref|XP_003954279.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Pan
troglodytes]
Length = 709
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/697 (50%), Positives = 476/697 (68%), Gaps = 37/697 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++H PP+ +R +EI+ V AR TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHXPPVDMRLDEISFVKVARGTSGTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TD 477
KKL +KN G E N D + DE + DAYL R+K E R++ ++ D+S TD
Sbjct: 420 AKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
E FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +KP
Sbjct: 480 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPV 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
+ KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+
Sbjct: 537 EVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEI 584
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST- 650
WK +S ++K E+D K A+ DY +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 585 WKGMSKEKKEEWDRKAEDARRDYEKAMKEY-EGGRGESSKRDKSKKKKKVKVKMEKKSTP 643
Query: 651 ----------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 644 SRGSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 680
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/626 (51%), Positives = 457/626 (73%), Gaps = 17/626 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G++ G+L+++ +++KN KTGKVE I+ D+ V W+++
Sbjct: 1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++TE DK+ +FK++F++++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GIKLLTNGGHVYKYDGFRDTEYDKLFDYFKSHFRVELVEKDLCVKGWNWGSVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + AFE+PL +VSQCTTGKNEVT+EFH ND++ SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGG-DPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE+E++ ++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F+GH+G+ +TCSYKA++G +YPLERGF
Sbjct: 300 GKLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+E+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDE 478
KKL +KN G +G KP Y +D+ SD+++ DAYL R+K E R++ D ++ + TDE
Sbjct: 420 AKKLSIKNRGLKEGMKPAY-DDYADSDEDQH-DAYLERMKEEGKIRENADSDESGDETDE 477
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
FNP + E +VAEE+DSNP+ + S DSD KK+ K K+K+
Sbjct: 478 SFNPGEEEDEVAEEFDSNPSASSSSADSDDDAEKKKEAKRAK------------IVKEKK 525
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
+K KD +APK+PMSAYM+W N REKIK +NPGIS T+++KK GE+WK++S
Sbjct: 526 PRKKKESKKTKDPSAPKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKD 585
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKES 624
+K E+D + +AK DY +A+K Y S
Sbjct: 586 KKEEWDRRAEEAKRDYEKAMKEYNSS 611
>gi|169647773|gb|ACA61888.1| CG4797 [Drosophila melanogaster]
gi|169647835|gb|ACA61919.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/478 (66%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDAD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647789|gb|ACA61896.1| CG4797 [Drosophila melanogaster]
gi|169647851|gb|ACA61927.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/478 (65%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAACSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVXLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--TDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K EA E++++DD+ + + TDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEGSTDEDFKPNENESDVAEEYDSN 476
>gi|169647733|gb|ACA61868.1| CG4797 [Drosophila melanogaster]
gi|169647735|gb|ACA61869.1| CG4797 [Drosophila melanogaster]
gi|169647745|gb|ACA61874.1| CG4797 [Drosophila melanogaster]
gi|169647749|gb|ACA61876.1| CG4797 [Drosophila melanogaster]
gi|169647763|gb|ACA61883.1| CG4797 [Drosophila melanogaster]
gi|169647767|gb|ACA61885.1| CG4797 [Drosophila melanogaster]
gi|169647777|gb|ACA61890.1| CG4797 [Drosophila melanogaster]
gi|169647779|gb|ACA61891.1| CG4797 [Drosophila melanogaster]
gi|169647783|gb|ACA61893.1| CG4797 [Drosophila melanogaster]
gi|169647787|gb|ACA61895.1| CG4797 [Drosophila melanogaster]
gi|169647795|gb|ACA61899.1| SSRP1 [Drosophila melanogaster]
gi|169647797|gb|ACA61900.1| SSRP1 [Drosophila melanogaster]
gi|169647807|gb|ACA61905.1| SSRP1 [Drosophila melanogaster]
gi|169647811|gb|ACA61907.1| SSRP1 [Drosophila melanogaster]
gi|169647825|gb|ACA61914.1| SSRP1 [Drosophila melanogaster]
gi|169647829|gb|ACA61916.1| SSRP1 [Drosophila melanogaster]
gi|169647839|gb|ACA61921.1| SSRP1 [Drosophila melanogaster]
gi|169647841|gb|ACA61922.1| SSRP1 [Drosophila melanogaster]
gi|169647845|gb|ACA61924.1| SSRP1 [Drosophila melanogaster]
gi|169647849|gb|ACA61926.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647755|gb|ACA61879.1| CG4797 [Drosophila melanogaster]
gi|169647817|gb|ACA61910.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/478 (66%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D VN QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLVNSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647761|gb|ACA61882.1| CG4797 [Drosophila melanogaster]
gi|169647823|gb|ACA61913.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/478 (66%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGRFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647791|gb|ACA61897.1| CG4797 [Drosophila melanogaster]
gi|169647853|gb|ACA61928.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G+++A
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESVA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647751|gb|ACA61877.1| CG4797 [Drosophila melanogaster]
gi|169647753|gb|ACA61878.1| CG4797 [Drosophila melanogaster]
gi|169647759|gb|ACA61881.1| CG4797 [Drosophila melanogaster]
gi|169647813|gb|ACA61908.1| SSRP1 [Drosophila melanogaster]
gi|169647815|gb|ACA61909.1| SSRP1 [Drosophila melanogaster]
gi|169647821|gb|ACA61912.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/478 (66%), Positives = 393/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647765|gb|ACA61884.1| CG4797 [Drosophila melanogaster]
gi|169647827|gb|ACA61915.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++ A
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESTA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LKSG +H FSSIEKEEY KLFD+I ++KL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKSGTVHIFSSIEKEEYAKLFDYITQRKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647785|gb|ACA61894.1| CG4797 [Drosophila melanogaster]
gi|169647847|gb|ACA61925.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN K GKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKAGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647743|gb|ACA61873.1| CG4797 [Drosophila melanogaster]
gi|169647805|gb|ACA61904.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+G +AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGMAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647775|gb|ACA61889.1| CG4797 [Drosophila melanogaster]
gi|169647837|gb|ACA61920.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+ L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDTPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647737|gb|ACA61870.1| CG4797 [Drosophila melanogaster]
gi|169647799|gb|ACA61901.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LL DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLLAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647739|gb|ACA61871.1| CG4797 [Drosophila melanogaster]
gi|169647801|gb|ACA61902.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAGDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+E H ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLELHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/619 (53%), Positives = 447/619 (72%), Gaps = 26/619 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+L+++ Q I+FKN KTGKV+ I +L W+++ L++ KNG ++++ GF+E+
Sbjct: 4 GRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRES 63
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
E +K+ FFKT++++++ EK+L V+GWNWG KF G +LSFD+ + FEIPL +VSQCT
Sbjct: 64 EFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPLSNVSQCT 123
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAI 200
TGKNEVT+EFH ND+A SL+E+RFY+P + G DPVEAF +V+++A VI ATGDAI
Sbjct: 124 TGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVEAFAQNVLSKADVIQATGDAI 182
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
+F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TVLR+F LPHKD RQ FFVISL
Sbjct: 183 CIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISL 242
Query: 261 DPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMK 320
DPPIKQGQTRYHFL LLF++DE + L +E+E+++++EG+L K +SG YE+++++MK
Sbjct: 243 DPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMK 302
Query: 321 VIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNF 380
+VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGFI++HKPP+HIRF+EI+ VNF
Sbjct: 303 ALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNF 362
Query: 381 ARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKED 440
AR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+ KKL +KN G E N D
Sbjct: 363 ARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYD 422
Query: 441 FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TDEDFNPDQAESDVAEEYDSNP 497
+ DE + DAYL R+K E R++ ++ D+S TDE FNP + E DVAEE+DSN
Sbjct: 423 EYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEEEEDVAEEFDSNA 482
Query: 498 TPT------DSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDK 551
+ + DSD D + KK K K RK+ +KP + KK KD
Sbjct: 483 SASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKKPVEVKKG------------KDP 527
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S ++K E+D K A+
Sbjct: 528 NAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDAR 587
Query: 612 EDYNEALKAYKESGGGQDS 630
+Y +A+K Y E G G+ S
Sbjct: 588 REYEKAMKEY-EGGRGESS 605
>gi|169647747|gb|ACA61875.1| CG4797 [Drosophila melanogaster]
gi|169647809|gb|ACA61906.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESRTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP Y VM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYGVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647731|gb|ACA61867.1| CG4797 [Drosophila melanogaster]
gi|169647793|gb|ACA61898.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+ EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNGNEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647771|gb|ACA61887.1| CG4797 [Drosophila melanogaster]
gi|169647833|gb|ACA61918.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QN +FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNTIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ E+E+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEREMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647741|gb|ACA61872.1| CG4797 [Drosophila melanogaster]
gi|169647803|gb|ACA61903.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+E H ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLESHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647757|gb|ACA61880.1| CG4797 [Drosophila melanogaster]
gi|169647819|gb|ACA61911.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 392/478 (82%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E A + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVESA-EEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFD E+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDSEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647781|gb|ACA61892.1| CG4797 [Drosophila melanogaster]
gi|169647843|gb|ACA61923.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 391/478 (81%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G+VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFRIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ LTPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV SLD
Sbjct: 180 IFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVPSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|169647769|gb|ACA61886.1| CG4797 [Drosophila melanogaster]
gi|169647831|gb|ACA61917.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 391/478 (81%), Gaps = 5/478 (1%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
+LK+T+QNI+FKN KTGKVEQI+ D+D +N QK VGTW LR+F K G LHRF GF+++E
Sbjct: 1 RLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDSE 60
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT 141
+K+ F K + ++ EKE+ V+GWNWG +F+G VLSFD + T FE+PL VSQC T
Sbjct: 61 HEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGPVLSFDKESKTIFEVPLSHVSQCVT 120
Query: 142 GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIA 201
GKNEVT+EFH ND+A L+EMRF+IP E + + DPV+ F +VM++ASVI+A+G++IA
Sbjct: 121 GKNEVTLEFHQNDDAPVGLLEMRFHIPAVE-SAEEDPVDKFHQNVMSKASVISASGESIA 179
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
+F EIQ TPRGRYDIKIF++FFQLHGKTFDYKIP+ +VLR+F LPHKD RQ FFV+SLD
Sbjct: 180 IFREIQIPTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLD 239
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPIKQGQTRYH+L LLF DE + +ELPFSE EL++KYEGKL+KE+SGP YEVM K+MKV
Sbjct: 240 PPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKV 299
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
++ RKIT PG+F GH+GT+AV CS+KAAAGY+YPLERGFI+IHKPP+HIRFEEI++VNFA
Sbjct: 300 LIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 359
Query: 382 RSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-D 440
RSGGSTRSFDFE+ LK+G +H FSSIEKEEY KLFD+I +KKL V N GK +K YK+ D
Sbjct: 360 RSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGK-DKSGYKDVD 418
Query: 441 FGSSDDEKEPDAYLARVK--REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
FG SD+E EPDAYLAR+K E DD+D + ++ESTDEDF P++ ESDVAEEYDSN
Sbjct: 419 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSN 476
>gi|338712138|ref|XP_001497140.3| PREDICTED: FACT complex subunit SSRP1 [Equus caballus]
Length = 680
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/614 (53%), Positives = 446/614 (72%), Gaps = 30/614 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--- 475
KKL +KN G +G PNY E + DE + DAYL R+K E R++ ++ D+S
Sbjct: 420 AKKLNIKNRGLKEGMNPNYDEY--ADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEE 477
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPT------DSDEDSDASEGTKKKKKEKSRKTITISEK 529
TDE FNP + E DVAEE+DSN + + DSD D + KK K K RK+ +K
Sbjct: 478 TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKS---RKK 534
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P + KK KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 535 PMEVKKG------------KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAG 582
Query: 590 ELWKTVSSKEKAEY 603
E+WK + SKEK E+
Sbjct: 583 EIWKGM-SKEKKEF 595
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/572 (54%), Positives = 418/572 (73%), Gaps = 14/572 (2%)
Query: 53 WQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
W+++ L++ KNG ++++ GF+E+E DK+ FFK ++++++ EK+L V+GWNWG
Sbjct: 15 WRRVALGHGLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTV 74
Query: 113 KFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEI 172
+F G +LSFD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P +
Sbjct: 75 RFGGQLLSFDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQE 134
Query: 173 AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFD 232
G DPVEAF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFD
Sbjct: 135 DG-VDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFD 193
Query: 233 YKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSE 292
YKIP +TVLR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E
Sbjct: 194 YKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNE 253
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
+E+++++EG+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 254 EEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGL 313
Query: 353 IYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEY 412
+YPLERGFI++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEY
Sbjct: 314 LYPLERGFIYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEY 373
Query: 413 GKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDE 472
GKLFDF+ KKL +KN G E D + DE + DAYL R+K E R++ ++
Sbjct: 374 GKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSS 433
Query: 473 D---ESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEK 529
D E TDE FNP + + DVAEE+DSN + + S D D+ G KK +E + I K
Sbjct: 434 DGSGEETDESFNPGEEDDDVAEEFDSNASSSSSSGDGDSDRGEKKSSQEGPK--IVKDRK 491
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
PR KK ES +K KD N PK+PMSAYM+W N REKIK D+PGIS T+++KK G
Sbjct: 492 PR--KKQVES------KKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAG 543
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
ELWK +S ++K E+D K AK DY +A+K Y
Sbjct: 544 ELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 575
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/693 (50%), Positives = 474/693 (68%), Gaps = 35/693 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L +E E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEXE------ 293
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 294 GQLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 353
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 354 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 413
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ES 475
KKL +KN G +G PNY E + DE + DAYL R+K E R +
Sbjct: 414 AKKLNIKNRGLKEGMNPNYDEY--ADSDEDQHDAYLERMKEEGXXRGGGGAQSSRGLCSF 471
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
+DE FNP + E DVAEE+DSN + + S + D+ +++K++ + K RKS+K
Sbjct: 472 SDESFNPGEEEEDVAEEFDSNASASSSSNEGDSD----REEKKRKQLKKAKMAKDRKSRK 527
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
+K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +
Sbjct: 528 KPLEV-----KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGM 582
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST----- 650
S ++K E+D K +A+ +Y +A+K Y E G G+ S K+ K KK K E ST
Sbjct: 583 SKEKKEEWDRKAEEARREYEKAMKEY-EGGRGEPSKRDKSKKKKKVKVKTEKKSTPSRGS 641
Query: 651 ------AVSPHKVKSKEFIESNGSSSDSDDDKK 677
KSKEF+ S+ SSS + KK
Sbjct: 642 SSKSSSRQLSESFKSKEFVSSDESSSGENKSKK 674
>gi|323650248|gb|ADX97210.1| FACT complex subunit SSRP1 [Perca flavescens]
Length = 612
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/618 (52%), Positives = 451/618 (72%), Gaps = 11/618 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L+ W+++
Sbjct: 1 MGDTLEFSDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIQAGELNMAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ +G ++++ GF++T+ +KI FFK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLGTSSGHVYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F+VN++TAFE+PL +VSQC TGKNEVT+EFH ND+ SL+E+RFY+P ++ DPVE
Sbjct: 121 FEVNDSTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF ++V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAENVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L SE++++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTLNMSEEDVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD-EDEDESTDED 479
KKL +KN G E K D S D+ + DAYL R+K E R++ +D E+ D +DE
Sbjct: 421 AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSEESDGESDES 480
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
FNP + + D+AEEYDSN + +DS ED D S+ +KKK K K K+K+
Sbjct: 481 FNPGEEDDDIAEEYDSNASASDSSEDGDDSDDASEKKKAKK----------PKVVKEKKE 530
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
++K+K+ PK+PMSAYM+W N RE+IK +NPGIS TEI+KK GE+W+ + E
Sbjct: 531 RKPRKEKKQKETGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDE 590
Query: 600 KAEYDEKVNKAKEDYNEA 617
K E+D K +AK +Y +A
Sbjct: 591 KEEWDTKAGEAKRNYEKA 608
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/624 (50%), Positives = 435/624 (69%), Gaps = 15/624 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G++ G+L+++ Q ++FKN KTGKV+ I +L W+++
Sbjct: 1 MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E DK+ FFK ++ +++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVIS PPIK GQ +HF+ + + + L +E+E+++++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISQVPPIKLGQEVFHFVIVAVFTEXDISLSLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 300 GRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ESTD 477
KKL +KN G E D + DE + DAYL R+K E R++ ++ D E TD
Sbjct: 420 AKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
FNP + + DVAEE+DSN + S + + KK + I KPR KK
Sbjct: 480 SSFNPGEEDDDVAEEFDSN---ASASSSSGDGDSDRDDKKPAKKAKIVKDRKPR--KKQP 534
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
ES +K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GELWK +S
Sbjct: 535 ES------KKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSK 588
Query: 598 KEKAEYDEKVNKAKEDYNEALKAY 621
++K E+D K A+ DY +A+K Y
Sbjct: 589 EKKEEWDRKAEDARRDYEKAMKEY 612
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/639 (52%), Positives = 451/639 (70%), Gaps = 22/639 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + L+F +V E RGA+ G+LK+ + +I+FKN KTGKV+Q+ D++ V W +
Sbjct: 1 MGDFLDFPDVQQEIRGAMNNGRLKLQNSSIIFKNMKTGKVDQLASADIEKVQWLQRARGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ L +G++HRF GFKE++ DK+ SF + N+ + + +K++S RGWNWG F GN L
Sbjct: 61 CLKVALNSGNIHRFDGFKESDFDKLSSFVEKNYDVTMEKKDVSYRGWNWGTVNFEGNTLD 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F V N +AFE+PL +VS C T K+EVT+EFH ND+AA SL+E+RF+IP + + DPV+
Sbjct: 121 FIVENKSAFELPLGNVSHCATAKSEVTIEFHQNDDAAVSLMELRFHIPPDA-NPENDPVQ 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F SVM++A +I ATGDAI FNE+QCLTPRGRYDIK++ +F QLHGKTFDYKIP +T+
Sbjct: 180 DFYTSVMSKADIIQATGDAICTFNEVQCLTPRGRYDIKLYPTFLQLHGKTFDYKIPYTTI 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPH+DGRQ FFV+SLDPPIKQGQTRYHF+ LLFN D+ +E+ SE +++EKYE
Sbjct: 240 LRLFLLPHRDGRQKFFVVSLDPPIKQGQTRYHFVILLFNTDDEITLEMGLSEDDIQEKYE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+K +SGP YE++++IMK +V RKITVPGSF G+TGT ++ CSYKAA G++YPLERGF
Sbjct: 300 GKLNKVMSGPEYEIISRIMKTLVQRKITVPGSFIGNTGTHSIACSYKAATGFLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
IF+HKPP+HIRF+E+ TVNFARS G+TRSFDF++E K G +TFSS+EK+EYGKL+DF+
Sbjct: 360 IFVHKPPVHIRFDEVGTVNFARSSGNTRSFDFDVETKMGTQYTFSSMEKDEYGKLYDFVT 419
Query: 421 EKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE----DDEDEDES 475
KKLRVKN GK +K Y ED S DE + DAY+ R+K E E+D++ +D+DE E
Sbjct: 420 NKKLRVKNIGGKLDKVKYNEDMSGS-DEDDHDAYMERMKAEGKEKDEDFQLDEDDDESED 478
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEK---PRK 532
D + N D +E D +E+DSN + TDS D D KK +K +K +K P
Sbjct: 479 EDFEPNLDMSEPD--DEFDSNISSTDSSNDDDDDSSESSKKSKKPKKEKKEKKKRTVPEG 536
Query: 533 SKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELW 592
K+ K+ G D N PK+P SAY +W N+MRE+IK +NP T+IAK G+ W
Sbjct: 537 KKRKKKVKG--------DPNKPKRPQSAYFLWLNEMREEIKAENPDAGVTDIAKLAGQRW 588
Query: 593 KTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD 631
K V+ +K ++ KAKE Y +A++ Y + DSD
Sbjct: 589 KEVT--DKTRWEGLAVKAKESYEKAMEEYLANKSDSDSD 625
>gi|410913681|ref|XP_003970317.1| PREDICTED: FACT complex subunit SSRP1-like [Takifugu rubripes]
Length = 705
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/608 (51%), Positives = 441/608 (72%), Gaps = 13/608 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L+ W+++
Sbjct: 1 MGDTLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++T+ +KI FFK N+K+++ E+++SV+GWNWG KF G +L
Sbjct: 61 GIKLGTSTGHVYKYDGFRDTDFEKILEFFKANYKVELTERDMSVKGWNWGTAKFSGPLLQ 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+N TAFEIPL +VSQC TGKNEVT+EFH ND+ SL+E+RFY+P N+ DPVE
Sbjct: 121 FDINENTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEISLMEVRFYVPPNQTDERQDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L SE++++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENINLALNMSEEDVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEI+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED-DEDEDESTDED 479
KKL +KN +G K +++ SDD++ DAYL R+K E R++ + ++ D +DE
Sbjct: 421 AKKLNIKN--RGFKEGKIDEYSDSDDDQH-DAYLERMKAEGKIREEGNDSDESDSGSDES 477
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
FNP + + D+AEEYDSN + +DS ++ D SE KKK+ + K+K+
Sbjct: 478 FNPGEEDDDIAEEYDSNASASDSSDEGDDSEDESAKKKKAKKVK---------VVKEKKE 528
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
++K+KD PK+PMSAYM+W N RE+IK +NPGIS TEI+KK GE+W+ + E
Sbjct: 529 RKPRKEKKQKDTGGPKRPMSAYMLWLNASRERIKSENPGISVTEISKKAGEMWRQLGKDE 588
Query: 600 KAEYDEKV 607
K E++ K
Sbjct: 589 KEEWETKA 596
>gi|432878236|ref|XP_004073283.1| PREDICTED: FACT complex subunit SSRP1-like [Oryzias latipes]
Length = 706
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/627 (50%), Positives = 445/627 (70%), Gaps = 14/627 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L+ W+++
Sbjct: 1 MGDMLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSNKTGKVDSIPAGELNLAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++T+ +K+ FFK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLGTSTGHVYKYDGFRDTDFEKLSEFFKANYKMELAEKDMCVKGWNWGTAKFSGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDVN+ TAFEIPL +VSQC TGKNEVT+EFH ND+ SL+E+RFY+P ++ + VE
Sbjct: 121 FDVNDNTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQESVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L +E +++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMNEDDVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+K +SG YEV++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLNKNMSGSLYEVVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEI+ VNFAR +TR I G H S + +EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEISCVNFARGTTTTRGGTVSIYCHPGYPH-LSLLFREEYGKLFDFVN 419
Query: 421 EKKLRVKNTGKGEKPNYK---EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDE-DEST 476
KKL +KN G EK K +D+ SD++K DAYL R+K E R++ +D DE D +
Sbjct: 420 AKKLNIKNRGFKEKKGMKGKIDDYSDSDEDKH-DAYLERMKAEGKIREEGNDSDESDAES 478
Query: 477 DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKD 536
DE FNP + + D+AEEYDSN + +DS ++ D SE KKK+ + K KK+
Sbjct: 479 DESFNPGEEDDDIAEEYDSNASASDSSDEGDDSEDESSKKKKPKKVV--------KEKKE 530
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
++ ++K+KD PK+PMSAYM+W N RE+IK +NPGIS TEI+KK GE+W+ +
Sbjct: 531 RKERKPRKEKKQKDAGGPKRPMSAYMLWLNSSRERIKAENPGISITEISKKAGEMWRGLG 590
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKE 623
EK E+D K +AK Y++A K YKE
Sbjct: 591 KDEKEEWDTKAGEAKRQYDKAKKEYKE 617
>gi|47086431|ref|NP_997967.1| structure specific recognition protein 1a [Danio rerio]
gi|33604076|gb|AAH56311.1| Structure specific recognition protein 1a [Danio rerio]
Length = 518
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/518 (55%), Positives = 385/518 (74%), Gaps = 2/518 (0%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G+ G+L+ + Q +V+K+ KTGKV+ I PDL W+++
Sbjct: 1 MGDTLEFNDIHQEVKGSWNDGRLRFSKQTVVYKSHKTGKVDSIPAPDLSEAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ G ++++ GFKET+ +KI +FFK N+K+++ EK++ V+GWNWG KF G++LS
Sbjct: 61 GLKLATSTGHIYKYDGFKETDYEKISAFFKANYKVELEEKDMCVKGWNWGTAKFAGSLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDV+++ FEIPL VSQC TGKNEVTVEFH ND+A SL+E+RFY+P N +DPVE
Sbjct: 121 FDVSDSPVFEIPLSSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +++++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE E++++YE
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLALNMSEDEVEKRYE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SGP YE+++++MK +VNRKITVPG+F+GH+G+ +TC+YKA++G +YPLER F
Sbjct: 301 GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERVF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEI+ VNFAR +TRSFDFEIE K TFS+IE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQFTFSNIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES-TDED 479
KKL +KN G E ED+ SD E + DAYL R+K E R++ D D+ E +DE
Sbjct: 421 AKKLTIKNRGFKEGMKGAEDYSDSD-EDQHDAYLERMKEEGKIREEGDGSDDSEGDSDES 479
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
FNP + + DV EEYDSN + +DS+ D SE KKKK
Sbjct: 480 FNPGEEDDDVPEEYDSNASVSDSEGDDGDSEDEGKKKK 517
>gi|322787094|gb|EFZ13315.1| hypothetical protein SINV_04520 [Solenopsis invicta]
Length = 383
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 275/381 (72%), Positives = 330/381 (86%), Gaps = 1/381 (0%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG+LK+TDQ+++FKN+KTGKVEQI+ D++ VN+QK +GTW LRIFLKNG+LHRF GFKE
Sbjct: 2 PGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWGLRIFLKNGTLHRFKGFKE 61
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
++ +KI FF N+K D+ EKELS++GWNWG KF G+VLSFDV + TAFEIPL DVSQC
Sbjct: 62 SDQEKIAKFFSVNYKKDMLEKELSLKGWNWGTAKFNGSVLSFDVGHHTAFEIPLYDVSQC 121
Query: 140 TTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDA 199
TGKNEVT+EFH ND+A SL+EMRF+IP ++ GD D VEAF VM++ASVI+ +GDA
Sbjct: 122 NTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSD-TGDQDSVEAFHQQVMDKASVISVSGDA 180
Query: 200 IAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVIS 259
IA+F EI CLTPRGRYDIKIF +FFQLHGKTFDYKIP+STVLR+F LPHKD RQ FFV+S
Sbjct: 181 IAIFREIHCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSTVLRLFLLPHKDNRQMFFVVS 240
Query: 260 LDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIM 319
LDPPIKQGQTRYH+L LLFNQ+E + +ELPF+E+ELKEKYE KL KE+SGPTYEV+ K+M
Sbjct: 241 LDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDKLSKEISGPTYEVLGKVM 300
Query: 320 KVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVN 379
KVI+NRK+T PG F GHTGT ++ CS+KAAAGY+YPLERGFI++HKPPIHIRFEEIA+VN
Sbjct: 301 KVIINRKLTGPGHFTGHTGTHSIGCSFKAAAGYLYPLERGFIYVHKPPIHIRFEEIASVN 360
Query: 380 FARSGGSTRSFDFEIELKSGV 400
FAR GGSTRSFDFEI+L SGV
Sbjct: 361 FARGGGSTRSFDFEIKLTSGV 381
>gi|390363101|ref|XP_781828.3| PREDICTED: FACT complex subunit SSRP1-like [Strongylocentrotus
purpuratus]
Length = 703
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/646 (48%), Positives = 441/646 (68%), Gaps = 45/646 (6%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
E L+F +VS E +GA+ G+L++ +Q + FKN KTGKV+QI D++ NW ++ L
Sbjct: 2 ETLDFPDVSQEVKGAMNGGRLRLNEQGVTFKNNKTGKVDQIQSGDIERTNWIRVARGLEL 61
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
++ LK+GS+ ++ GFKE++ +K+ F + ++ +++ +KELS++GWNWG +F G+ L F
Sbjct: 62 KLCLKSGSVFKYDGFKESDREKVADFLQRHYSVELLDKELSLKGWNWGTARFEGSELDFH 121
Query: 123 VNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAF 182
V+ +AF++PL +VS TT KNEV +EFH ND+A SL+EMRFY+P+ + TD AF
Sbjct: 122 VDKKSAFQLPLGNVSHATTAKNEVILEFHQNDDAEVSLMEMRFYVPSTD--ATTDAAGAF 179
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
++VM +A +I ATGDAI EI CLTPRGRYDIKIF +F QLHGKTFDYKIP +TVLR
Sbjct: 180 LENVMAKADIIQATGDAICSLEEIPCLTPRGRYDIKIFPTFLQLHGKTFDYKIPFTTVLR 239
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F LPHKD RQ FFV+SLDPPI QGQTRYHFL L FN+++T +EL +E EL++KYEGK
Sbjct: 240 LFLLPHKDNRQMFFVMSLDPPIVQGQTRYHFLILSFNKEDTLALELNLTEDELEQKYEGK 299
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L KE+SGP +E++++IMK +V RKITVPG+F+G G A++CSYK+ +G++YPLERGF++
Sbjct: 300 LTKEMSGPMFEIVSRIMKCLVARKITVPGNFKGAKGAHAISCSYKSNSGFLYPLERGFMY 359
Query: 363 IHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREK 422
+HKPP+HIRF+EI +VNFA + GS R FDFEIE ++ FSSIEK++Y LF ++ K
Sbjct: 360 VHKPPMHIRFDEIQSVNFAGT-GSLRYFDFEIETRNKTTFVFSSIEKDDYTPLFSYVSSK 418
Query: 423 KLRVKNTG-KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE--DDEDEDESTDED 479
KLRVKN G KG+ NY +D G SDD DAYL +VK E ER++ D+ D D S+DED
Sbjct: 419 KLRVKNRGMKGDTVNY-DDIGDSDDGNAHDAYLEQVKAEGREREEGEIDENDSDSSSDED 477
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKE--------------------- 518
FNP ++ SDVAEEYDSN S DSD + G+ + + +
Sbjct: 478 FNPLESASDVAEEYDSNIETHTSGSDSDYTAGSGEDEADDDNYMKEREERRERKRQEKEK 537
Query: 519 ------KSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKI 572
+ ++T S+KPRK K ++KD N PK+P + YM+W ND RE I
Sbjct: 538 EKSKAKQKKRTKKSSDKPRKKVK-----------QEKDANRPKRPTTGYMLWLNDQREDI 586
Query: 573 KKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEAL 618
K+ PGIS T++ KK GE+W+ + KA+++E + K++Y A+
Sbjct: 587 KEQFPGISVTDLTKKAGEMWQKLGDTGKAKWNEIAGEKKKEYEIAM 632
>gi|449681405|ref|XP_002159252.2| PREDICTED: FACT complex subunit SSRP1-like [Hydra magnipapillata]
Length = 774
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 447/642 (69%), Gaps = 24/642 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ LEF +V S RGAL PG+LK+ +FK+ KTGKV+ ++ W ++ +
Sbjct: 1 MTDILEFNDVYSLVRGALNPGRLKLNKSGTIFKSYKTGKVDSTPVAEIQSSKWMRVARGF 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ LKNG ++ GFKE + +K+ F+ NF +++ +++LSV GWNWG KF G+V+S
Sbjct: 61 GLKLVLKNGHQEKYHGFKEVDYEKVKEFYAKNFVMELEDQDLSVSGWNWGEAKFKGSVMS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F+V N AFEIPL+DVSQ TTGKNEVT+EFH ND+A L+EMRF++P + + D V+
Sbjct: 121 FEVENKAAFEIPLQDVSQATTGKNEVTIEFHRNDDAKVQLMEMRFFVPEKD---EEDAVK 177
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F D +M++A +I ATGDAI F+E+ CLTPRGRY I+++ F QLHGKT+DYKIP + +
Sbjct: 178 NFHDQIMSKADIIQATGDAIVTFDEVACLTPRGRYSIRVYPKFLQLHGKTYDYKIPRTAI 237
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
+R+F LPH+D R FFVIS+DPP++QG TRY FL L F +DE EL +E+E++ KY
Sbjct: 238 VRLFLLPHQDQRFMFFVISMDPPLRQGNTRYPFLILQFERDEEMSCELNLTEEEIENKYN 297
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
KL +++SG +E++++++K I +KITVPGSF+ TGTSA++CSYKA+ G +YPLE+GF
Sbjct: 298 NKLTRKMSGAVFEIVSRVLKEICQQKITVPGSFKSKTGTSAISCSYKASNGLLYPLEKGF 357
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
+F+HKPP++IRF+EI++VNFAR + R+FDFE++L +G + FSS+ K+EY LFDF+
Sbjct: 358 MFVHKPPVYIRFDEISSVNFARGSTTGRTFDFEMDLNNGTVVVFSSLPKDEYTPLFDFVN 417
Query: 421 EKKLRVKN-TGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDE--DEDESTD 477
+KKLR+KN N + S+ DE DAYL R+K E AERDDE +E E ES D
Sbjct: 418 QKKLRIKNKVASSGGSNLDQMIESNPDEH--DAYLQRMKAEGAERDDEANEGDSESESED 475
Query: 478 EDFNP--DQAESDVAEEYDSNPTPTDSDEDSDA-SEGTKKKKKEKSRKTITISEKPRKSK 534
EDFNP ++ ES V EE+DS+ + DED+++ SE KK+K + +K ++P+K +
Sbjct: 476 EDFNPANEKVES-VREEFDSDVGNSTDDEDNESNSEAKNKKRKSEPKKNEPKIKRPKKEE 534
Query: 535 KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKT 594
S+K+KKKD+NAPK+PMSA+M++ N++REKIK DNPGI+FT+IAKKGGE WKT
Sbjct: 535 G-------SSKKKKKDENAPKRPMSAFMLYMNEVREKIKADNPGIAFTDIAKKGGEQWKT 587
Query: 595 VSSKEKAEYDEKVNKAKEDYNEALKAYKES---GGGQDSDDG 633
++ K K ++ +AK Y AY ++ GG D G
Sbjct: 588 LTDKTK--WENMAKEAKNKYTIDFAAYSKTIKDGGAAIKDSG 627
>gi|47215698|emb|CAG04782.1| unnamed protein product [Tetraodon nigroviridis]
Length = 669
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/640 (49%), Positives = 432/640 (67%), Gaps = 55/640 (8%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L+ W+++
Sbjct: 1 MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF++T+ +KI FFK N+K+++ EK++SV+GWNWG KF G +L
Sbjct: 61 GIKLGTSTGHIYKYDGFRDTDFEKISEFFKANYKVELTEKDMSVKGWNWGTAKFSGPLLQ 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+N TAFEIPL +VSQC TGKNEVT+EFH ND+ SL+E+RFY+P N+ DPVE
Sbjct: 121 FDINENTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEISLMEVRFYVPPNQTDERQDPVE 180
Query: 181 ----AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIP 236
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP
Sbjct: 181 DSPQAFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIP 240
Query: 237 ISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
+TVLR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L SE++++
Sbjct: 241 YTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENINLALNMSEEDVE 300
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRG--------------------- 335
++EGKL K +SG YE+++++MK +VNRKITVPG+F+G
Sbjct: 301 RRFEGKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGYVSNPANKTLVWLGGVCVCVC 360
Query: 336 -------------------HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIA 376
H+G +TCS+KA++G +YPLERGFI++HKPP+H+RFEEI+
Sbjct: 361 VCVGGYLQAVFKCCSFFRSHSGAQCITCSFKASSGLLYPLERGFIYVHKPPVHLRFEEIS 420
Query: 377 TVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPN 436
VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+ KKL +KN G E
Sbjct: 421 CVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVNAKKLNIKNRGFKEGMK 480
Query: 437 YKEDFGSSDDEKEPDAYLARVKREAAERDDED-DEDEDESTDEDFNPDQAESDVAEEYDS 495
K D S D+ + DAYL R+K E R++ + ++ D +DE FNP + + D+AEEYDS
Sbjct: 481 GKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDSGSDESFNPGEEDDDIAEEYDS 540
Query: 496 NPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPK 555
N + +DS ED D SE KKK K K K+K+ ++K+KD PK
Sbjct: 541 NASASDSSEDGDDSEDEGAKKKAKK----------VKVVKEKKERKPRKEKKQKDAGGPK 590
Query: 556 KPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
+PMSAYM+W N RE+IK +NPGIS TEI+KK GE+W+ +
Sbjct: 591 RPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQL 630
>gi|50417356|gb|AAH77083.1| Ssrp1b protein [Danio rerio]
Length = 543
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/515 (54%), Positives = 383/515 (74%), Gaps = 10/515 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M++ LEF E+ E +G+ G+L+ + Q +V+KN KTGKV+ I P+L W+++
Sbjct: 1 MSDTLEFNEIYQEVKGSWNDGRLRFSKQTVVYKNSKTGKVDTIPVPELTQAQWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
++++ G ++++ GFK+ +++KI +FK N+K+++ EK++ V+GWNWG KF G +LS
Sbjct: 61 GIKLWTSTGHIYKYDGFKDADLEKISEYFKDNYKVELTEKDMCVKGWNWGTAKFNGPLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FDVN++ FEIPL VSQCTTGKNEVTVEFH ND+ SL+E+RFY+P +DPVE
Sbjct: 121 FDVNDSPTFEIPLSSVSQCTTGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVE 180
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 181 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 240
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++ET + L +E E++ ++E
Sbjct: 241 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEETISLTLNMNEDEVERRFE 300
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL+K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGF
Sbjct: 301 GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF 360
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+RFEEIA VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 361 IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN 420
Query: 421 EKKLRVKNTGKGEKPNYK--EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES-TD 477
KKL +KN G EK K +D S DE + DAYL R+K E R++ +D D+ E +D
Sbjct: 421 AKKLSIKNRGFKEKKGMKGNDDMYSDSDEDQHDAYLERMKEEGKIREEGNDSDDSEGESD 480
Query: 478 EDFNPDQAESDVAEEYDSNPTPT-------DSDED 505
E FNP + + D+AEEYDS + + DSDED
Sbjct: 481 ESFNPGEEDEDIAEEYDSKASASESSAEEGDSDED 515
>gi|351712970|gb|EHB15889.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 677
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 298/629 (47%), Positives = 423/629 (67%), Gaps = 14/629 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G LK+ Q+I+F++ KTGKV I +L W+++
Sbjct: 1 MAEMLEFNDIYQEVKGSMKKGHLKLNHQDIIFRSSKTGKVNNIQAWELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ +NG ++++ GF+E+ K+ FFKT++ +++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTRNGHVYKYDGFQESVFQKLSDFFKTHYHLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL VSQCTT KNEVT+EFH ND SL+EM FY+P ++ G D VE
Sbjct: 121 FDIGDQPVFEIPLSSVSQCTTSKNEVTLEFHQNDNPEVSLVEMHFYVPPSQEEG-VDLVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A I AT DAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP T+
Sbjct: 180 AFAQNVLSKADAIRATVDAICIFQELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYCTM 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
L +F LP KD RQ FFVISLDPPIKQGQT YHFL LLF++DE + L +E EL++++E
Sbjct: 240 LHLFLLPRKDQRQMFFVISLDPPIKQGQTCYHFLILLFSKDEDISLTLNMNE-ELEKRFE 298
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K++SG YEV ++IMK +VN KITVPG+F+GH G +TCSYKA +G +YPLE+GF
Sbjct: 299 GQLTKDMSGLLYEVFSQIMKALVNCKITVPGNFQGHLGAQCITCSYKAGSGLLYPLEQGF 358
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
++IH+PP+HI F+EI V+FA +TR FD +IE + G +TFSSI+KEEYGKLFDFI
Sbjct: 359 VYIHRPPLHISFQEITFVSFAHGIATTRFFDLDIETEQGTRYTFSSIQKEEYGKLFDFIS 418
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD---EDEDESTD 477
KKL +K+ G E N + DE + DAYL ++K E R++ + +D E D
Sbjct: 419 AKKLNIKSQGLKEGKNLSYHKYTDADEDQHDAYLEKMKEEGKIREENANGSSDDLGEEMD 478
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
E F P + E DVAEE+DSN + + S + ++ + K++K+ K K +++ P+ KK
Sbjct: 479 ESFYPGEEEEDVAEEFDSNASASSSSNEGESDQDEKEQKRLKKAK---MAKDPKGHKKTV 535
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
E +K KD + P++P+SAY++W N RE IK ++PGIS ++KK GE+WK +S
Sbjct: 536 EV------KKGKDPSVPEQPLSAYVLWLNASREMIKSEHPGISIANLSKKAGEIWKGMSK 589
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYKESGG 626
K E+ K + +Y +A+K Y+ G
Sbjct: 590 TMKEEWGHKAEDVRLEYEKAVKEYERGLG 618
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/665 (46%), Positives = 448/665 (67%), Gaps = 11/665 (1%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
+ L+++ V E RGA+ G+L++ + IVFKN KTGK++ I DL W+++ + L
Sbjct: 6 QFLDYKNVFQENRGAMHDGRLQLLKEKIVFKNNKTGKIDSIQQNDLHSALWRRVARDFEL 65
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
+ + +G + RF GFKE E +++ F K +KID+ +ELS +GWNWG T F GN + F
Sbjct: 66 KFQMNSGQVFRFDGFKEMEFERLKDFVKNYYKIDLEHQELSGKGWNWGTTDFEGNEMMFQ 125
Query: 123 VNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAF 182
V +FEIPL +VSQCT K+EVT+EFH ND++ SL+EMRF+IP ++ D V+ F
Sbjct: 126 VGQKLSFEIPLNNVSQCTQNKDEVTMEFHQNDDSELSLMEMRFFIPPSQDEM-IDKVKDF 184
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
D+VM +A V+ G AI VF ++QCLTPRGRYDI+++ F QLHGKTFDYKI +++LR
Sbjct: 185 HDNVMAKADVLQVKGTAICVFQDLQCLTPRGRYDIRMYPKFIQLHGKTFDYKITYTSILR 244
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F LPHKD RQ FFV+SLDPP+KQG TRYHFL LLF +++ +EL + E++E++ GK
Sbjct: 245 LFLLPHKDQRQIFFVVSLDPPLKQGMTRYHFLILLFYKEDDLAVELSLPDDEIEERFGGK 304
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L K++SGP YEV++++MK +V RKITVPGSF+G G ++TC+YKA++G+++PLERGF++
Sbjct: 305 LQKDMSGPMYEVVSRVMKHLVQRKITVPGSFKGLNGVQSITCTYKASSGFLFPLERGFMY 364
Query: 363 IHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
+HKPP+HIRF+EIA VNFAR G+T +SFDFEIE +S FS+IE+++Y L+DF+
Sbjct: 365 VHKPPVHIRFDEIAYVNFAR--GTTKINKSFDFEIETRSKNNFVFSNIERDQYASLYDFV 422
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE-DDEDEDESTDE 478
K+L++KN GK + ++ S +D D Y+ R+K+EAAER+ + DD+D+DES D+
Sbjct: 423 HNKQLKIKNIGK-DGADFDLMVDSDEDADVHDPYMERMKQEAAEREKQVDDDDDDESEDD 481
Query: 479 DFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKE 538
DF P+ ++V EEY+S+ S + E +++ +EK +K + +K+
Sbjct: 482 DFQPETNVAEVEEEYNSDVGSASSGASDEEEEDGEEEVEEKPKKRKKEKVMKERRQKE-- 539
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
+ G KRKKKD NAPK+P SAY +W N+ R + K +N GIS TE+ K G+ WK +
Sbjct: 540 -TPGKVKRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGISVTELTKLAGKEWKKIDPD 598
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVK 658
EK +++ K+K ++ A+K YK GGG+ S K K + +S+ VSP K K
Sbjct: 599 EKQKFERMYQKSKVKFDAAMKEYKSQGGGRTSSSPAKKMKMKSPKPSKASSSMVSPSKFK 658
Query: 659 SKEFI 663
SKEFI
Sbjct: 659 SKEFI 663
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/689 (44%), Positives = 443/689 (64%), Gaps = 45/689 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MTE LE+ + E+ G + G++K+ D I FKN + +++ I+ +++ ++W ++
Sbjct: 1 MTE-LEYNNIYQEYMGLMHQGRIKLGDSQINFKNIRNNRLQTIDSSEIEKIDWMRVGNKP 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LRI + +G HRF GF E + ++I F + IDV + E ++GWN+G + G VL
Sbjct: 60 GLRICMSSGIRHRFGGFAEKDFEEIKKFALDRWSIDVDQVEQCIKGWNYGRAEVKGQVLE 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAG-DTDPV 179
F+V++ FEIPL VS CT GK+E +EFH ND+ + SL+EMRF+IPT+ A D DPV
Sbjct: 120 FEVDDKPCFEIPLNTVSNCTAGKSEAALEFHQNDDCSVSLMEMRFHIPTDPDADEDVDPV 179
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
E F+ +VM A + T +A+ +I C TPRGRYDIK++ ++ LHGKT+DYKIPI T
Sbjct: 180 EEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHGKTYDYKIPIRT 239
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F++DE +++L + ++LKE+Y
Sbjct: 240 IMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDLGLTSEQLKEQY 299
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+GKL+K +SG +EV++KI +V+V+ KITVPGSF GH+GT AV C++K A+G++YPLE+G
Sbjct: 300 KGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQASGFLYPLEKG 359
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
F+++HKPP++IRFEEI+ VNFARS STRSFDFEIE+K G L F+S+EKEEY +LFDF+
Sbjct: 360 FVYVHKPPMYIRFEEISCVNFARSDVSTRSFDFEIEMKGGSLLIFNSVEKEEYNRLFDFV 419
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER--------------- 464
K LR+KN + +KP Y E+ G SD+E +P Y +K+EA +
Sbjct: 420 NNKHLRIKNAKRLDKPTYTENLGDSDEELDP--YKETLKQEARNKEAAESDDDTDSEDHD 477
Query: 465 -DDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKT 523
D E+D + S+ ED + S+ EEYDS D+ + S++ G K+KK K
Sbjct: 478 YDLEEDLKKKHSSSED-----SGSEPDEEYDS-----DAAQSSESDSGDHKRKKSPKPKK 527
Query: 524 ITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTE 583
+ + + S+++K KKKD NAPKKP SAY +WF + KK+ G+S TE
Sbjct: 528 KDLLKSSKGSRREK---------KKKDPNAPKKPQSAYFIWFGENYSSFKKE--GVSVTE 576
Query: 584 IAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAK 643
A++ G++WK + + K +Y+E+ + KE Y +K Y +GG TS +KK AK
Sbjct: 577 AAQRAGKMWKEIDEETKKKYEERAKEDKERYAREMKEYVANGG---HSAASTSLTKK-AK 632
Query: 644 KKETASTAVSPHKVKSKEFIESNGSSSDS 672
K + S K KSKE+I SS++S
Sbjct: 633 KSKPDSPMKLNSKTKSKEYISDTDSSNES 661
>gi|348574311|ref|XP_003472934.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 681
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/652 (46%), Positives = 428/652 (65%), Gaps = 23/652 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G L++ Q I+F++ KTGKV+ I +L W+++
Sbjct: 1 MAEMLEFSDIYQEMKGSMKEGHLRLDHQGIIFRHSKTGKVDNIQACELMEGVWRRVSLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ LK+G ++R+ GF+E+E ++ FFKT++ +++ EK+L V+GWNWG KF +LS
Sbjct: 61 GLKLLLKHGHVYRYDGFQESEFQRLSHFFKTHYHLELKEKDLCVKGWNWGTVKFGEQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + + FEIPL +VSQCTT KNEVT+EFH +D+ SL+EMRFY+P + G D V+
Sbjct: 121 FDIGSQSVFEIPLSNVSQCTTAKNEVTLEFHQSDDVEVSLVEMRFYVPPTQEEG-VDLVQ 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI AT DAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKI S V
Sbjct: 180 AFAQNVLSKADVIQATADAICIFQELQCLTPRGRYDIRIYPTFLHLHGKTFDYKISFSMV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
L +F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF+++E + L +E+E+++++E
Sbjct: 240 LHLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENITLTLNMNEEEVEKRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
G+L K + G YEV +++MK +VN KITVPG+F+GH G + CSYKA++G +YPLE+ F
Sbjct: 300 GQLTKTMVGSRYEVFSRVMKALVNHKITVPGNFQGHLGAKCIACSYKASSGLLYPLEQDF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+H+ F EIA VNFAR +TR FD EIE K G TFSSI+KEEYGKLFDFI
Sbjct: 360 IYVHKPPVHVHFHEIACVNFARGITTTRFFDLEIETKQGTQFTFSSIQKEEYGKLFDFIS 419
Query: 421 EKKLRVKN--TGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED---ES 475
KKL +KN G+ P Y++ + DE+ DAYL R+K E R++ ++ D E
Sbjct: 420 AKKLNIKNQELKDGKNPKYRK--YTDSDEELHDAYLERMKEEGKIREENPNDSSDDLGEE 477
Query: 476 TDEDFNP-DQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSK 534
DE F P ++ E +VAEE+DSN + T S + S+ +K++K+ R + +K
Sbjct: 478 MDESFKPGEEEEEEVAEEFDSNASTTSSFSNEGDSDQDEKEQKQLQR--------AKTAK 529
Query: 535 KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKT 594
K+ +K KD + KKP AY +W +EKIK D+PGIS T++ KK ++WK
Sbjct: 530 DHKDHKKTQEVKKNKDPSPHKKPTFAYTLWLKANQEKIKADHPGISTTDLPKKADKMWKR 589
Query: 595 VSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKE 646
+S K+ ++ E KA KE GG K+SK K KK+
Sbjct: 590 MSKKKGKLGHGGKDEVAS--CECEKATKECEGG----PCKSSKRDKAKTKKD 635
>gi|393907418|gb|EFO24137.2| structure-specific recognition protein 1 [Loa loa]
Length = 685
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/684 (45%), Positives = 441/684 (64%), Gaps = 33/684 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MTE LE+ V E G + G++K+ D I FKN + +++ I+ +++ ++W ++
Sbjct: 1 MTE-LEYNNVYQEHMGIMHQGRIKLGDSQINFKNTRNNRLQTIDSSEINKIDWMRVGNKP 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+RI L +G HRF GF E + ++I F + I V + E ++GWN+G + G VL
Sbjct: 60 GIRICLSSGIRHRFGGFSEKDFEEIKKFALDRWSIGVEQVEQCIKGWNYGRAEVKGQVLE 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAG-DTDPV 179
F+V++ FEIPL VS CT GK+E +EFH ND+ + SL+EMRF+IPT+ A D DPV
Sbjct: 120 FEVDDKPCFEIPLNTVSNCTAGKSEAALEFHQNDDCSVSLMEMRFHIPTDPDADEDVDPV 179
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
E F+ +VM A + T +A+ +I C TPRGRYDIK++ ++ LHGKT+DYKIPI T
Sbjct: 180 EEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHGKTYDYKIPIRT 239
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F++DE +++L + ++LKE+Y
Sbjct: 240 IMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDLGLTSEQLKEQY 299
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+GKL+K +SG +EV++KI +V+V+ KITVPGSF GH+GT AV C++K A+G++YPLE+G
Sbjct: 300 KGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQASGFLYPLEKG 359
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
F+++HKPP++IRFEEI+ VNFARS STRSFDFEIE+K G L F+S+EKEEY +LFDF+
Sbjct: 360 FVYVHKPPMYIRFEEISCVNFARSDVSTRSFDFEIEMKGGSLLIFNSVEKEEYNRLFDFV 419
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVK-----REAAERDDE-DDEDED 473
K LR+KN + +KP Y E+ SD+E +P Y +K +EAAE DDE D ED D
Sbjct: 420 NNKHLRIKNAKRLDKPTYAENLADSDEELDP--YKETLKQEARNKEAAESDDETDSEDHD 477
Query: 474 ESTDEDF-----NPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISE 528
+ED + +++ S+ EEYDS DS + S+ G K+KK K
Sbjct: 478 YDLEEDLKRKRSSTEESGSEPDEEYDS-----DSAQSSEGGSGDHKQKKSPKSKK----- 527
Query: 529 KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
K + ++KKKD NAPKKP SAY +WF + KK+ G+S TE A+K
Sbjct: 528 ----KDLSKSTKAAKREKKKKDPNAPKKPQSAYFIWFGENYSSFKKE--GVSVTEAAQKA 581
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETA 648
G++WK + + K +Y+E+ + KE Y +K Y + GG S TS +KK K K ++
Sbjct: 582 GKMWKEIDEETKKKYEERAKEDKERYAREMKEYM-ANGGPASSTASTSLTKKVKKPKPSS 640
Query: 649 STAVSPHKVKSKEFIESNGSSSDS 672
+ K KSKE+I SS++S
Sbjct: 641 PVKLHS-KPKSKEYISDTDSSNES 663
>gi|312074352|ref|XP_003139932.1| structure-specific recognition protein 1 [Loa loa]
Length = 682
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/683 (44%), Positives = 440/683 (64%), Gaps = 34/683 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MTE LE+ V E G + G++K+ D I FKN + +++ I+ +++ ++W ++
Sbjct: 1 MTE-LEYNNVYQEHMGIMHQGRIKLGDSQINFKNTRNNRLQTIDSSEINKIDWMRVGNKP 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+RI L +G HRF GF E + ++I F + I V + E ++GWN+G + G VL
Sbjct: 60 GIRICLSSGIRHRFGGFSEKDFEEIKKFALDRWSIGVEQVEQCIKGWNYGRAEVKGQVLE 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAG-DTDPV 179
F+V++ FEIPL VS CT GK+E +EFH ND+ + SL+EMRF+IPT+ A D DPV
Sbjct: 120 FEVDDKPCFEIPLNTVSNCTAGKSEAALEFHQNDDCSVSLMEMRFHIPTDPDADEDVDPV 179
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
E F+ +VM A + T +A+ +I C TPRGRYDIK++ ++ LHGKT+DYKIPI T
Sbjct: 180 EEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHGKTYDYKIPIRT 239
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F++DE +++L + ++LKE+Y
Sbjct: 240 IMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDLGLTSEQLKEQY 299
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+GKL+K +SG +EV++KI +V+V+ KITVPGSF GH+GT AV C++K A+G++YPLE+G
Sbjct: 300 KGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQASGFLYPLEKG 359
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
F+++HKPP++IRFEEI+ VNFARS STRSFDFEIE+K G L F+S+EKEEY +LFDF+
Sbjct: 360 FVYVHKPPMYIRFEEISCVNFARSDVSTRSFDFEIEMKGGSLLIFNSVEKEEYNRLFDFV 419
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVK-----REAAERDDEDDEDEDE 474
K LR+KN + +KP Y E+ SD+E +P Y +K +EAAE DDE D D D
Sbjct: 420 NNKHLRIKNAKRLDKPTYAENLADSDEELDP--YKETLKQEARNKEAAESDDETDNDYD- 476
Query: 475 STDEDF-----NPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEK 529
+ED + +++ S+ EEYDS DS + S+ G K+KK K
Sbjct: 477 -LEEDLKRKRSSTEESGSEPDEEYDS-----DSAQSSEGGSGDHKQKKSPKSKK------ 524
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
K + ++KKKD NAPKKP SAY +WF + KK+ G+S TE A+K G
Sbjct: 525 ---KDLSKSTKAAKREKKKKDPNAPKKPQSAYFIWFGENYSSFKKE--GVSVTEAAQKAG 579
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAS 649
++WK + + K +Y+E+ + KE Y +K Y + GG S TS +KK K K ++
Sbjct: 580 KMWKEIDEETKKKYEERAKEDKERYAREMKEYM-ANGGPASSTASTSLTKKVKKPKPSSP 638
Query: 650 TAVSPHKVKSKEFIESNGSSSDS 672
+ K KSKE+I SS++S
Sbjct: 639 VKLHS-KPKSKEYISDTDSSNES 660
>gi|52138889|gb|AAH82613.1| SSRP1 protein [Xenopus laevis]
Length = 458
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 256/461 (55%), Positives = 353/461 (76%), Gaps = 5/461 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G++ G+L+++ +++KN KTGKVE I+ D+ V W+++
Sbjct: 1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF+ETE DK+ +FK++F +++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GIKLLTNGGHVYKYDGFRETEYDKLFDYFKSHFSVELVEKDLCVKGWNWGSVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + AFE+PL +VSQCTTGKNEVT+EFH ND++ SL+E+RFY+P + G D VE
Sbjct: 121 FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGG-DSVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDA+ +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
LR+F LPHKD RQ FFVISLDPPIKQGQTRYHFL LLF++DE + L SE+E++ ++E
Sbjct: 240 LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFE 299
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K +SG YE+++++MK +VNRKITVPG+F GH+G+ +TCSYKA++G +YPLERGF
Sbjct: 300 GKLKKSMSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKASSGLLYPLERGF 359
Query: 361 IFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
I++HKPP+HIRF+EI VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+
Sbjct: 360 IYVHKPPVHIRFDEITCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN 419
Query: 421 EKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKR 459
KKL +KN G +G KP Y +D+ S DE + DAYL + K+
Sbjct: 420 AKKLSIKNRGLKEGMKPAY-DDYADS-DEDQHDAYLEKKKK 458
>gi|170580208|ref|XP_001895163.1| structure-specific recognition protein 1 [Brugia malayi]
gi|158597991|gb|EDP35988.1| structure-specific recognition protein 1, putative [Brugia malayi]
Length = 689
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/677 (44%), Positives = 442/677 (65%), Gaps = 20/677 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MTE LE+ + E+ G + G++K++D I FKN + +++ I+ +++ ++W ++
Sbjct: 1 MTE-LEYNNIYQEYMGLMHQGRIKLSDSQINFKNIRNNRLQAIDSSEIEKIDWMRVGNKP 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LRI + +G HRF GF E + + I F + IDV + E ++GWN+G + G VL
Sbjct: 60 GLRICMSSGIRHRFGGFAEKDFEDIKKFALDRWSIDVDQVEQCIKGWNYGRAEVKGQVLE 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAG-DTDPV 179
F+V++ FEIPL VS CT GK+E +EFH ND+ + SL+EMRF+IPT+ A D DPV
Sbjct: 120 FEVDDKPCFEIPLNTVSNCTAGKSEAALEFHQNDDCSVSLMEMRFHIPTDPDADEDVDPV 179
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
E F+ +VM A + T +A+ +I C TPRGRYDIK++ ++ LHGKT+DYKIPI T
Sbjct: 180 EEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHGKTYDYKIPIRT 239
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F++DE +++L + ++LKE+Y
Sbjct: 240 IMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDLGLTSEQLKEQY 299
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+GKL+K +SG +EV++KI +V+V+ KITVPGSF GH+GT AV C++K A+G++YPLE+G
Sbjct: 300 KGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQASGFLYPLEKG 359
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
F+++HKPP++IRFEEI+ VNFARS STRSFDFEIE+K G L F+S+EKEEY +LFDF+
Sbjct: 360 FVYVHKPPMYIRFEEISCVNFARSDVSTRSFDFEIEMKGGSLLIFNSVEKEEYNRLFDFV 419
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDEST--- 476
K LR+KN + +KP Y E+ G SD+E +P Y +K+EA ++ + +D+ +S
Sbjct: 420 NNKHLRIKNAKRLDKPTYTENLGDSDEELDP--YKETLKQEARNKEAAESDDDTDSEDRL 477
Query: 477 ---DEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKS 533
D D D + + +S P D + DSDA++ ++ + RK S KP+K
Sbjct: 478 WFYDYDLEEDLKKRKHSSSENSGSEP-DEEYDSDAAQSSESDSGDHKRKK---SPKPKKK 533
Query: 534 KKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWK 593
K S G ++KKKD NAPKKP SAY +WF + KK+ G+S TE A++ G++WK
Sbjct: 534 DLSKSSKGSKREKKKKDPNAPKKPQSAYFIWFGENYASFKKE--GVSVTEAAQRAGKMWK 591
Query: 594 TVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVS 653
+ + K +Y+E+ + KE Y +K Y +GG S T+ + K AKK + S
Sbjct: 592 EIDEETKKKYEERAKEDKERYAREMKEYMANGGPVSS----TASTTKKAKKPKPDSPVKL 647
Query: 654 PHKVKSKEFIESNGSSS 670
K KSKE+I SS+
Sbjct: 648 NSKTKSKEYISDTDSSN 664
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/663 (44%), Positives = 407/663 (61%), Gaps = 47/663 (7%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
+ F ++ E RG + PGKL++ + ++KN+KTGKV+ + D++ W L I
Sbjct: 4 IAFDHITQEVRGTVYPGKLRLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLGLSI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
LKN SLHR+ GF E E +K+ SFFK F ++V ++ELS +G+NWG F G+VL F V
Sbjct: 64 KLKNNSLHRYDGFGEIEAEKVGSFFKKYFDVEVVKRELSYKGYNWGDVDFDGDVLEFSVK 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N AFE+PL +V+ T KNE+ EFH NDEA L EMR Y P E A
Sbjct: 124 NAMAFEVPLSNVANATLNKNEIIFEFHLNDEAEICLSEMRLYTPGTE-ADREGKAPIIYS 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
V +A +I TGD + F ++QCL PRGRYD+K++ SF LHGK+FD+K+P +T+ R+
Sbjct: 183 KVTQKADIIQVTGDFLIEFKQLQCLQPRGRYDVKLYPSFIHLHGKSFDFKVPKNTITRLM 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPH D RQ FF + LDPPIK GQTRYHF+ LF++D ++E+ +E+ L+E++ GKL
Sbjct: 243 MLPHPDNRQIFFTVQLDPPIKHGQTRYHFVIFLFDKDSHVDLEMAATEEWLQEQFNGKLA 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
+ +SGP YEV+A++ K++ ++K+TVPGSF G AV CSYKA+ G +YPLERGF F+
Sbjct: 303 RNISGPEYEVVARVFKILYDQKVTVPGSFSAKGGGCAVACSYKASVGLLYPLERGFTFVP 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
+PPI IRF+EI TV F+R G+ RSFDFE+E ++G+ HTF+SIE++EY L+DF+ KKL
Sbjct: 363 RPPISIRFDEIVTVQFSRGTGAQRSFDFEVETRNGLTHTFTSIERDEYHHLYDFVTAKKL 422
Query: 425 RVKNTGKGEK--PNYKEDFGSSDDEKEPDAYLARVKREAAERDDE-DDEDEDESTDEDFN 481
RVKN K N +D SS DE DAY+ +VK EA ER E DD+D+D+ DEDF
Sbjct: 423 RVKNISSENKTITNPGDDVWSSSDESH-DAYMEKVKTEARERTAEMDDDDDDDEDDEDFK 481
Query: 482 PDQAE-SDVAEEYDSNPTPT-------------------------------------DSD 503
P +++ S++AEEYDSN T D D
Sbjct: 482 PPESDGSELAEEYDSNVQTTTSEEDSEDNDEDDDDGDADGNGNKNNARKKDKRDDSSDLD 541
Query: 504 E---DSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSA 560
E DS +S+ K K++K ++ S +PRK + + K KD NAP +P+SA
Sbjct: 542 EEEADSLSSDVEPKPKQKKLKEEPKTSNRPRKDETKSSKRQTKKQEKPKDPNAPTRPLSA 601
Query: 561 YMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALK 619
Y +WFN+ REKI K G S E+AK GGELW+ + S+ K+ Y +V++ K+ Y E L+
Sbjct: 602 YFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNMDSETKSTYQSRVDELKKKYQEDLR 661
Query: 620 AYK 622
Y+
Sbjct: 662 VYQ 664
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/634 (44%), Positives = 405/634 (63%), Gaps = 18/634 (2%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
+ F ++ E RG + PGKL++ + ++KN+KTGKV+ + D++ W L I
Sbjct: 4 IAFDHITQEVRGTVYPGKLRLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLGLSI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
L+N SLHR+ GF E E +K+ SFFK F +++ ++EL +G+NWG F G+VL F V
Sbjct: 64 KLRNNSLHRYDGFGEIEAEKVGSFFKKYFDVEIVKRELCYKGYNWGDVDFDGDVLEFSVK 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N AFE+PL +V+ KNE+ EFH NDEA L EMR Y P E A A
Sbjct: 124 NAMAFEVPLSNVANAVLNKNEIIFEFHLNDEAEICLSEMRLYTPGTE-ADREGKAPAIYS 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
V +A +I TGD +A F ++QCL PRGRYD+K++ SF LHGK++D+K+P +T+ R+
Sbjct: 183 KVTQKADIIQVTGDFLAEFKQLQCLQPRGRYDVKLYPSFIHLHGKSYDFKVPKNTITRLM 242
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LPH D RQ FF + LDPPIK GQTRYHF+ LF++D +E+ +E L+E++ GKL
Sbjct: 243 VLPHPDNRQIFFAVQLDPPIKHGQTRYHFVVSLFDKDSHINLEMAATEDWLQEQFNGKLT 302
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
+ +SGP YEV+A++ KV+ ++K+TVPGSF G AV CSYKA+ G +YPLERGF F+
Sbjct: 303 RNISGPEYEVVARVFKVLYDQKVTVPGSFSAKGGGCAVACSYKASVGLLYPLERGFTFVP 362
Query: 365 KPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
+PPI IRF+EI V F+R G+ RSFDFE+E ++G+ HTF+SIE++EY L+DF+ KKL
Sbjct: 363 RPPISIRFDEIVAVQFSRGTGAQRSFDFEVETRNGLTHTFTSIERDEYHHLYDFVTAKKL 422
Query: 425 RVKNTGKGEK-PNYKEDFGSSDDEKEPDAYLARVKREAAERDDE-DDEDEDESTDEDFNP 482
RVKN K N +D SS DE DAY+ +VK EA ER E DD+D+D+ DEDF P
Sbjct: 423 RVKNISSENKTTNPGDDVWSSSDESH-DAYMEKVKTEARERTTEMDDDDDDDEDDEDFKP 481
Query: 483 DQAE-SDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSG 541
+++ S++AEEYDSN T S+++S ++ +++++ S + K+ S
Sbjct: 482 PESDGSELAEEYDSNVQTTTSEDESGENDDDDDSEEDET----------NISNETKQPSK 531
Query: 542 GSTKRKK--KDKNAPKKPMSAYMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSK 598
TK++K KD NAP +P+SAY +WFN+ REKI K+ G S E+AK GE+W+ + S
Sbjct: 532 RQTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWRNMDST 591
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDD 632
K+ Y +V++ K+ Y E L+ Y+ + G D
Sbjct: 592 AKSSYQSRVDELKKKYQEDLRIYQSNLGSNKEPD 625
>gi|196010223|ref|XP_002114976.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
gi|190582359|gb|EDV22432.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
Length = 694
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 292/671 (43%), Positives = 445/671 (66%), Gaps = 26/671 (3%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
L+F+EV G L PG+LK++ ++I+FK KTGKV++I L +W + + LR+
Sbjct: 6 LDFEEVFVLNHGILNPGRLKLSAKDILFKASKTGKVDKIMAGQLMNASWFRAARGYELRL 65
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
L +G +++F GFKE + DK+ F N+ I + EKELSV+G+NWG F G+ LS + +
Sbjct: 66 ALASGVIYKFEGFKEADYDKLADLFSGNYNIQLEEKELSVKGFNWGNHSFEGSSLSLNSD 125
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPT--NEIAGDTDPVEAF 182
++ +EIPL +V + T GKNEVT+EFH +D+A SL+EMRF++P NE D D V+ F
Sbjct: 126 SSMTYEIPLNEVCRSTVGKNEVTLEFHQHDDAQVSLMEMRFHLPATNNE---DEDYVQTF 182
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
+ V+ +A++I ATGDAIA F E+ CLTPRGRY+IK+F +F QLHGKT+DYKI ++++LR
Sbjct: 183 NEKVLAKATIIQATGDAIAEFTEVSCLTPRGRYNIKLFPTFIQLHGKTYDYKIALTSILR 242
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
MF LPH D R FFV +LDPP+KQGQTRY F + F ++E +L S++EL +KY K
Sbjct: 243 MFLLPHPDERHFFFVFTLDPPLKQGQTRYPFFIIQFIKEEEISFDLNLSQEELNQKYANK 302
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
++K + GP YE+ ++++K + +RKIT+PG+F G T +S+V+CS+K ++G++YPL RGFI+
Sbjct: 303 VNKTMEGPIYEIFSRLLKALTDRKITLPGAFIGSTKSSSVSCSHKNSSGFLYPLSRGFIY 362
Query: 363 IHKPPIHIRFEEIATVNFAR--SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
+HKPP+HIR +EI VNFAR GG+ ++FDFE+ K+ V++TFS+I+K +Y L+D+ +
Sbjct: 363 VHKPPVHIRPDEIVCVNFARVSGGGTIKTFDFEVITKNSVIYTFSNIDKSDYTPLYDYTK 422
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDE----DEDEST 476
+ L +KN G ++ ++K++ S+DE + D YLARVK E E+ +E D +
Sbjct: 423 KNNLPIKNKGL-KRQSHKDELLDSEDEDDQDHYLARVKAEGEEKTTMAEEGEESDSTDDE 481
Query: 477 DEDFNPDQ-AESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKK 535
DEDFNPD+ +++ +AEEYD++ SD D + ++G +KK R+ +K+KK
Sbjct: 482 DEDFNPDESSDNSIAEEYDTDAI-NSSDSDYEENQGKRKKAIPVPREF----RAGKKAKK 536
Query: 536 DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTV 595
E + +D N PK+P+S YM+W R++IK +NP + E+AKK GE+WK++
Sbjct: 537 KNEVKPAKKVKNARDPNLPKRPLSGYMLWLQKQRDRIKNENPSFTVAEVAKKAGEIWKSL 596
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
+EK +++ + K KE YN+ + Y E Q+ TSKSKK KK + SP
Sbjct: 597 KEEEKKKWNNESAKLKEQYNKDMAEYNE----QNQTKATTSKSKKATPKKSSK----SPM 648
Query: 656 KVKSKEFIESN 666
K KS E+++++
Sbjct: 649 KYKSAEYVDTD 659
>gi|203465|gb|AAA40927.1| HMG box (bp. 1168..1428), partial [Rattus norvegicus]
Length = 561
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 302/574 (52%), Positives = 396/574 (68%), Gaps = 30/574 (5%)
Query: 149 EFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQC 208
EFH ND+A SL+E+RFY+P + G DPVEAF +V+++A VI ATGDAI +F E+QC
Sbjct: 1 EFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVEAFAQNVLSKADVIQATGDAICIFRELQC 59
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRGRYDI+I+ +F LHGKTFDYKIP +TVLR+F LPHKD RQ FFVISLDPPIKQGQ
Sbjct: 60 LTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQ 119
Query: 269 TRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKIT 328
TRYHFL LLF++DE + L +E+E+++++EG+L K +SG YE+++++MK +VNRKIT
Sbjct: 120 TRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKIT 179
Query: 329 VPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTR 388
VPG+F+GH+G +TCSYKA++G +YPLERGFI++HKPP+HIRF+EI+ VNFAR+ +TR
Sbjct: 180 VPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARATTTTR 239
Query: 389 SFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTG--KGEKPNYKEDFGSSDD 446
SFD EIE K G +TFSSIE+EEYGKLFDF+ KKL +KN G +G P Y +D+ SD+
Sbjct: 240 SFDSEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGY-DDYADSDE 298
Query: 447 EKEPDAYLARVKREAAERDDEDDEDEDES---TDEDFNPDQAESDVAEEYDSNPTPTDSD 503
++ DAYL R+K E R++ ++ D+S TDE FNP + E DVAEE+DSN + + S
Sbjct: 299 DQH-DAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSS 357
Query: 504 EDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMM 563
+ D+ KK+K+ K K K RKS+K S +K KD NAPK+PMSAYM+
Sbjct: 358 NEGDSDREEKKRKQLKRAKMA----KDRKSRKKS-----SEGKKGKDPNAPKRPMSAYML 408
Query: 564 WFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE 623
W N REKIK D+PGIS T+++KK GE+WK +S ++K E+D K A+ +Y EA+K Y E
Sbjct: 409 WLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKGEDARREYEEAMKEY-E 467
Query: 624 SGGGQDSDDGKTSKSKKPAKKKETASTAVSPHK-----------VKSKEFIESNGSSSDS 672
G G S K+ K KK K E ST KSKEF+ S+ SSS
Sbjct: 468 GGRGDSSKRDKSKKKKKVKAKLEKKSTPSRGSSSKASSRQLSDSFKSKEFVSSDESSSGE 527
Query: 673 DDDKKASSKRKRDSDEDSKAKTKKKKEKSESESD 706
+ KK +R DSDE+ A T E S S SD
Sbjct: 528 NKSKK-KRRRSEDSDEEELASTPPSSEDSASGSD 560
>gi|339233218|ref|XP_003381726.1| FACT complex subunit Ssrp1 [Trichinella spiralis]
gi|316979424|gb|EFV62220.1| FACT complex subunit Ssrp1 [Trichinella spiralis]
Length = 773
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 295/742 (39%), Positives = 430/742 (57%), Gaps = 85/742 (11%)
Query: 5 LEFQEVSSEFRGAL-CPGK-----------LKITDQ-NIVFKNKKTGKVEQINGPDLDFV 51
LEF +V E G L C GK +I ++ N KN KTGKVE I+ D+D
Sbjct: 28 LEFNDVCMENLGFLVCIGKAFTISEFPMTLFRILERSNCRIKNTKTGKVEHISASDIDHC 87
Query: 52 NWQKLVGTWALRIFLKNGSLHRFAGFKET-----------EIDKICSFFKTNFKIDVPEK 100
+W +L + AL+ LK+G ++RF GFK++ + D++ ++ K N+ +++
Sbjct: 88 HWVRLADSPALKCLLKSGPMYRFGGFKDSVSHVQLLLLSKDFDRLSAYLKKNWNMELKNI 147
Query: 101 ELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESL 160
E + G N FIG+VL F+ + F+IPL +V+ C++ KNEV +EF+ NDE A SL
Sbjct: 148 EPCITGTNQATANFIGSVLEFENDGQLLFDIPLANVNNCSSAKNEVIMEFNQNDECAVSL 207
Query: 161 IEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
+EMR YI + + + DP E FK + +A + +G +AV ++ C TPRGRYDIKI+
Sbjct: 208 MEMRLYI-SGDPNTEEDPAEEFKRKIAEKAGFLKESGKELAVLEQVLCATPRGRYDIKIY 266
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+ LHGKTFDYKIPIS++LR+F LPH+DGR+ FFVI LDPP+KQGQTRYHFL + +
Sbjct: 267 PTMLALHGKTFDYKIPISSILRLFLLPHQDGRRMFFVIGLDPPVKQGQTRYHFLIMDILK 326
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTS 340
D+ ++EL E LKEKY G+L ++LSGP +E++++IMK +V ++ITVPG+F GHTGT
Sbjct: 327 DDEVDLELGLPEDVLKEKYNGELPRQLSGPLFEIISRIMKCLVRKQITVPGNFVGHTGTP 386
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGV 400
AV C+YK+A G++YPL+ GF+++HKPP+++R EEI+ +NFARS +T+SFDFEI+ K G
Sbjct: 387 AVGCAYKSAGGFLYPLQHGFLYVHKPPVYVRLEEISCINFARSHVTTKSFDFEIQTKQGN 446
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKRE 460
+ TF+SI KEEYGKL+DF+ K + + NTGK + GSSD+E E D Y ++K E
Sbjct: 447 IFTFTSIMKEEYGKLYDFVVSKGINITNTGKRLETTENLFKGSSDEEGERDHYAEQLKSE 506
Query: 461 AAERDDEDDEDEDESTDEDFNPDQAE------SDVAEEYDSNPTPTDSDEDSDASEGTKK 514
A E+++ ++ D DES D D++P++ E + DS + DE SD E K+
Sbjct: 507 AREKEENNENDSDESEDSDYDPEKGEVRKNSSESSSSSSDSEASGGSEDESSDQEEKNKQ 566
Query: 515 KKKE-------------------------------------KSRKTITISEKPRKSKKDK 537
K K + + KP+K+ K
Sbjct: 567 KTKNVSKKAKSSSSAESDEEKDDDDSDDDNNDDDDDDQEEEEEEEYDDEKPKPKKAHNKK 626
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
K++KK K PK+ SAYM + + R K KK PG+SF +++K E WK +
Sbjct: 627 AVQPPKPKKQKKVKEGPKRNKSAYMFYLMENRSKFKK--PGMSFADVSKAAAEQWKKLKD 684
Query: 598 K----EKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVS 653
K EK +++ + Y + LK +K+ GGG A K +ST V
Sbjct: 685 KSVSIEKHKWENLAAVDRRRYLDELKEFKKKGGGNIV-----------ATKSSKSSTPVK 733
Query: 654 PHKVKSKEFIESNGSSSDSDDD 675
K+KS+E IE + SSSD + D
Sbjct: 734 ASKIKSREIIEDSDSSSDENMD 755
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 303/726 (41%), Positives = 440/726 (60%), Gaps = 52/726 (7%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
+ F ++ E RG + PGKL++ + + +FKN++TGKV+ DL W LRI
Sbjct: 4 IAFDNITQEVRGIVYPGKLRLRENDFMFKNEQTGKVDHFLRADLVAAQWIARATGLGLRI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF---------- 114
LKN S+HR+ GF ETE +K+ FFK +F I++ ++EL +G+NWG +
Sbjct: 64 KLKNDSMHRYDGFGETEAEKVAKFFKAHFGIEISKRELCYKGFNWGDVEVDGWSLFCPNS 123
Query: 115 -IGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIA 173
+G+VL V N+ +FEIPL ++S T KNE+ EFH ND+A L EMR Y P E
Sbjct: 124 PLGDVLEMSVKNSMSFEIPLANLSNATLNKNEIVFEFHLNDDAEICLSEMRLYTPGTEAD 183
Query: 174 GDTD-PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFD 232
D P+ V +A +I TGD + F ++QCL PRGRYD+K++ SF LHGK+FD
Sbjct: 184 RDGKAPI--IYSKVTEKADIIQVTGDFLVEFKQLQCLQPRGRYDVKLYPSFIHLHGKSFD 241
Query: 233 YKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSE 292
+K+P ST+ R+ LPH D RQ FFV+ LDPPIK GQTRYHF+ +LF++D ++++ SE
Sbjct: 242 FKVPKSTITRLLMLPHPDNRQVFFVLQLDPPIKHGQTRYHFVIMLFDKDSHVDLDMAASE 301
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMK-------VIVNRKITVPGSFRGHTGTSAVTCS 345
+ L+E ++GKL + ++GP EV+A+I K V+ ++K+TVPG+F G SAV CS
Sbjct: 302 EWLQEHFDGKLTQNIAGPECEVVARIFKASSFEFSVLFDQKVTVPGAFSAKNGGSAVACS 361
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFS 405
YKA+ G +YPLERGF F+ +PP+ IRF+EI TV F+R G+ RSFDFE+E ++G+ HTF+
Sbjct: 362 YKASVGLLYPLERGFTFVPRPPVSIRFDEIITVQFSRGTGAQRSFDFEVETRNGLTHTFT 421
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEK------PNYKEDFGSSDDEKEPDAYLARVKR 459
SI++ EY +L+DF+ KKLRVKN + ED SS +E DAY+ +VK
Sbjct: 422 SIDRNEYHQLYDFVTSKKLRVKNIDSESRAGGGSGATAAEDAWSSSEESH-DAYMEKVKT 480
Query: 460 EAAERDDE-DDEDEDESTDEDFN-PDQAE-SDVAEEYDSNPTPTDSDEDSDASEGTKKK- 515
EA ER E DD+D+D+ DEDF PD+++ S++AEEYDSN T S E+SD+S
Sbjct: 481 EARERQVEMDDDDDDDEDDEDFKPPDESDASELAEEYDSNVETTSSAEESDSSASGSGSG 540
Query: 516 -----KKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMRE 570
+ +KSR + ++ K++ KD NAP +P +AY+MWFN+ R+
Sbjct: 541 SEPEPQPKKSRPVPKEKPPAKPKATERPK-----KKRVKDPNAPSRPPTAYIMWFNEHRD 595
Query: 571 KIKKD--NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
+I K NP S E+AK GE W+ + S+ KA+Y +V++ K++Y ++ Y+
Sbjct: 596 EISKSIGNP-TSVAEVAKAAGERWRNIDSETKAKYQARVDELKKNYESEMRIYRNKIASG 654
Query: 629 DSDDGKTSK-SKKPAKKKETASTAVSPHKVKSKEFIESNGSSSD-----SDD-DKKASSK 681
+ TSK +K P K +A S KS+E++ ++ S SD SDD KK++ K
Sbjct: 655 ELVAPSTSKVTKAPRTSKPSAPKVGSGSTFKSEEYVATSESGSDELSDLSDDGGKKSTGK 714
Query: 682 RKRDSD 687
DSD
Sbjct: 715 DSGDSD 720
>gi|156379246|ref|XP_001631369.1| predicted protein [Nematostella vectensis]
gi|156218408|gb|EDO39306.1| predicted protein [Nematostella vectensis]
Length = 451
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 324/442 (73%), Gaps = 8/442 (1%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+LK+ VFK KTG+V+Q + D++ +W ++ L+I LK+G RF GFKE+
Sbjct: 14 GRLKLHKSGAVFKASKTGRVDQFSKDDIESAHWLRVACGQELKIVLKSGLQFRFDGFKES 73
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ + F K+ F + + E ELSV+GWNWG F G+ L+F+V+ AFEIPL+DVSQ T
Sbjct: 74 DFANLSEFLKSFFGVKLEEMELSVKGWNWGTATFNGSALAFEVDKKPAFEIPLKDVSQAT 133
Query: 141 T-GKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDA 199
T G NEVT+EFH +D+A +L+EMRFYIPT A TDP F + V+++A +I TGDA
Sbjct: 134 TAGNNEVTLEFHQHDDAEVALMEMRFYIPTP--ADSTDPNPTFHEHVLSKADIIQITGDA 191
Query: 200 IAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVIS 259
I ++ CLTPRGRY +KIF +F QLHGKT+DYKIP +T+LR+F LPHKD FFV+S
Sbjct: 192 IVTIPDVACLTPRGRYTMKIFPTFVQLHGKTYDYKIPYTTILRIFLLPHKD--HMFFVVS 249
Query: 260 LDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIM 319
+DPPIKQGQTRY FL F++DE +++L S++E+KEKY+GK++KE+SG YE+++++M
Sbjct: 250 MDPPIKQGQTRYPFLITRFDKDEHFDVKLNISKEEMKEKYDGKIEKEMSGAIYEIISRLM 309
Query: 320 KVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVN 379
K +V +KITVPG+F+ H G S +TCS++A +G +YPLERGFIFIHKPP+H+RF+EI+ VN
Sbjct: 310 KAVVGKKITVPGTFKSHQGVSCITCSHRAGSGLLYPLERGFIFIHKPPVHVRFDEISAVN 369
Query: 380 FAR---SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPN 436
FAR +GG +RSFDFE++ K+G FSSIE+EEYG+LFDF+R+KKLR+KNTGK K
Sbjct: 370 FARVAGAGGHSRSFDFELQTKNGTTIVFSSIEREEYGRLFDFVRDKKLRIKNTGKSTKEK 429
Query: 437 YKEDFGSSDDEKEPDAYLARVK 458
+D D+ E DAYL VK
Sbjct: 430 NIDDDLMGSDDDEHDAYLETVK 451
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/627 (40%), Positives = 406/627 (64%), Gaps = 9/627 (1%)
Query: 2 TEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWA 61
++LEF V+ E +G GKLK+T Q+I++K+ TG+ +QI+ DLD + W+++
Sbjct: 5 ADSLEFS-VNQEIKGNKHSGKLKLTSQSILYKDSVTGRSDQISFDDLDEIYWRRVADGNQ 63
Query: 62 LRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSF 121
L+I L +G + ++ GFK+ + K+ S+F+ N ++ +++LS++GWNWG + + L+F
Sbjct: 64 LKIELLSGKIKKYDGFKDEHLKKLSSYFRNNPDKEIKQEDLSIKGWNWGKAEVNKDELAF 123
Query: 122 DVNN-TTAFEIPLRDVSQCTTGKNEVTVEFHPNDEA-AESLIEMRFYIPTNEIAGDTDPV 179
++ AFEIPL +VS CT+ KNE+++ FH N++A A +++E RF++P + ++DP
Sbjct: 124 TADDGKKAFEIPLGNVSNCTSNKNELSLTFHQNEDANALTMMECRFHMPMAD--ENSDPA 181
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
+ ++A V+ A G+A IQCLTPRGRYD+K+F+ F LHG T D+K+ ++
Sbjct: 182 AEMAAMITSRADVLEAKGNAFMTLPSIQCLTPRGRYDVKLFDKFLHLHGATHDFKLTYTS 241
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
++R+F LPHKD RQ FFVI++DPPIKQGQTRY F+ +F++++ E+ E E++E++
Sbjct: 242 IIRLFLLPHKDQRQVFFVIAIDPPIKQGQTRYPFIICVFDKEKYEEINFDLDEAEVEERF 301
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
EGKL K + GP YE+++++MK + RKITVPG+F+ ++ + + CSYKA +G ++PLERG
Sbjct: 302 EGKLQKNMQGPHYELVSRLMKAVTGRKITVPGNFKSNSSLACMACSYKAQSGVLFPLERG 361
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
F+++HKPP+H+RF+EI VNFAR RSF+F I+ K G H F +I++ EY FDF+
Sbjct: 362 FMYLHKPPMHLRFDEIDNVNFARESTKLRSFEFHIQTKQGQKHIFGTIDRAEYNCFFDFV 421
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED 479
++K L++KN K E+ E+F S ++ PD Y ++K E +DED E +D D D
Sbjct: 422 KQKGLKIKNINKHEQQRV-ENFSDSSGDEYPDHYANKLKDEVRGMEDEDSESDDSDFDPD 480
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
+A+ EE+DS+ +D + S+ +++++ +K ++ + KS KD
Sbjct: 481 KADPEAKEGGDEEFDSDFADRSTDSEDRGSDASEEERPKKKKEVKEKKPRKEKSSKDGVE 540
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
RKKK+K+ PK+ MSAY + N+ RE IK+DNPGI TE++K GE W+ +++ +
Sbjct: 541 ---KKTRKKKNKDGPKRAMSAYFFFINEERENIKRDNPGIKVTEVSKIAGERWREINAND 597
Query: 600 KAEYDEKVNKAKEDYNEALKAYKESGG 626
KA+Y+EK K KE Y + +GG
Sbjct: 598 KAKYEEKALKDKERYEREKAEFIAAGG 624
>gi|268565525|ref|XP_002639471.1| Hypothetical protein CBG04066 [Caenorhabditis briggsae]
Length = 689
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 283/711 (39%), Positives = 416/711 (58%), Gaps = 51/711 (7%)
Query: 4 ALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALR 63
+LEF + +E G L PG LK+ D + +FK+ K GK +++ D+ + WQKL +R
Sbjct: 3 SLEFTGIFTENGGVLTPGTLKVEDTSAIFKSDKAGKTIKLSPGDIKDIRWQKLGNRPGIR 62
Query: 64 IFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDV 123
LK+G HRF GFKE + KI ++++ + + + L ++GWN+G + G + F
Sbjct: 63 FGLKDGGSHRFGGFKEADFGKILVVTESSWGLGIEKTNLVIKGWNYGNVQVKGKNVEFSW 122
Query: 124 NNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAF 182
N FEIP +VSQC KNE +EFH ++ SL+EMRF++P + E D D VE F
Sbjct: 123 ENNPIFEIPCTNVSQCVANKNEAVLEFHQHENNPISLMEMRFHMPVDPENEDDIDRVEEF 182
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
K +V+ A + T I + ++I C TPRGRYDIK++ + LHGKT+DYKIP+ T+ R
Sbjct: 183 KQAVLAYAGLEAETEQPITLLSDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKTITR 242
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F +PHKDGR +FV++L+PPI+QGQTRY +L F +D+ EME+ ++ +LKEKY G+
Sbjct: 243 LFLVPHKDGRHVYFVLALNPPIRQGQTRYTYLVFEFVKDDDQEMEIALTD-DLKEKYGGQ 301
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L E+ GP YE ++ + KV+ N K+TVPG F G +GT A+ CS+K G +YPLE+GF+F
Sbjct: 302 LKSEMDGPLYENVSILFKVVCNLKVTVPGRFIGSSGTPAIQCSHKQNPGLLYPLEKGFLF 361
Query: 363 IHKPPIHIRFEEIATVNFARS--GGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
IHKP ++IR EEI++ +FARS G TR+FDFEI++KSG F+++EKEE KLFD++
Sbjct: 362 IHKPVMYIRLEEISSCHFARSDAGTVTRTFDFEIDMKSGQSVMFNAMEKEENHKLFDYLN 421
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD--------------D 466
+K+++++N+ + EK + + SSDDE +P Y VK E R+ D
Sbjct: 422 KKEIKIRNSQRLEKNQHVD---SSDDEIDP--YTNTVKAEGRGREESDDDESTDEDYDLD 476
Query: 467 ED----DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK 522
+D +D D S PD E D E DS+ T +D E + KKK +
Sbjct: 477 KDIKNQKKDRDSSEGSGSEPDD-EYDSGSEKDSSGTGESEPDD----ENVRPKKKSEVNS 531
Query: 523 TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
K +K ++ +K+KD N PK+ +AY +WFN R +K+D G +
Sbjct: 532 EKK-----SKKEKPEKVGKKRKGKKEKDPNEPKRAATAYFLWFNANRASLKED--GDTVP 584
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPA 642
E+AKKGG WK +S+ +K E+++K + K Y +K YK++GGG +S + P
Sbjct: 585 EVAKKGGAKWKEMSADDKKEWEQKAAQDKIRYENEMKEYKKNGGGS------SSVTSNPP 638
Query: 643 KKKETASTAVSPHKVKSKEFIESNGSSSDSDDDK-KASSKRKRDSDEDSKA 692
KK + SP K KSKE I + S D + K K SSK +DE A
Sbjct: 639 KKGTS-----SPSKYKSKEHISDSDDSDDDEPPKQKKSSKEATPTDESDMA 684
>gi|17507971|ref|NP_491688.1| Protein HMG-3 [Caenorhabditis elegans]
gi|74956084|sp|O01683.1|SSP1B_CAEEL RecName: Full=FACT complex subunit ssrp1-B; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1-B; AltName: Full=HMG box-containing protein 3;
AltName: Full=Structure-specific recognition protein 1-B
gi|351065896|emb|CCD61910.1| Protein HMG-3 [Caenorhabditis elegans]
Length = 689
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 268/676 (39%), Positives = 406/676 (60%), Gaps = 30/676 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MTE L+F+ V E G L G L +T+ +I F K GK I G D+D + WQKL
Sbjct: 1 MTE-LKFKGVYVEDIGHLTCGTLTLTENSINFIGDKGGKSVYITGTDVDKLKWQKLGNKP 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
LR+ L +G HRF GF + ++ KI SF +N+ + + L + GWN+G G +
Sbjct: 60 GLRVGLSDGGAHRFGGFLDDDLQKIQSFTSSNWSKSINQSNLFINGWNYGQADVKGKNIE 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPV 179
F N FEIP +VS KNE +EFH N+++ L+EMRF++P + E DTD V
Sbjct: 120 FSWENEPIFEIPCTNVSNVIANKNEAILEFHQNEQSKVQLMEMRFHMPVDLENEEDTDKV 179
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
E FK +V+ A + T I + +I C TPRGRYDIK++ + LHGKT+DYKIP+ T
Sbjct: 180 EEFKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKT 239
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ R+F +PHKDGRQ +FV+SL+PPI+QGQT Y +L F +DE ++EL ++++L + +
Sbjct: 240 INRLFLVPHKDGRQVYFVLSLNPPIRQGQTHYSYLIFEFGKDEEEDLELSLTDEQL-DYF 298
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
G L +E++GP YE ++ + K I N K+TVPG F G +GT A+ C+++ G +YP+E+G
Sbjct: 299 NGNLQREMTGPIYETISILFKSICNLKVTVPGRFLGSSGTPAIQCTHRQNLGLLYPMEKG 358
Query: 360 FIFIHKPPIHIRFEEIATVNFAR--SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFD 417
F+FI KP ++IRFEEI++ +FAR SG TR+FDFEI+LK+G TFS+++KEE KLFD
Sbjct: 359 FLFIQKPVMYIRFEEISSCHFARSDSGTVTRTFDFEIDLKTGSSLTFSAMDKEENNKLFD 418
Query: 418 FIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES-- 475
++ +K+++++N+ + + N +GSS DE + D Y + VK E E+DD+ D++ +
Sbjct: 419 YLNKKEIKIRNSHRID--NKSAGYGSS-DEDDIDPYKSTVKAEGREQDDDSDDESTDEDY 475
Query: 476 -TDEDFNPDQAESDVAEEYDSNP-TPTDSDEDSDASEGTKKKKKEKS-----RKTITISE 528
D+D + + D +E S P DS + DAS + E++ +++
Sbjct: 476 DLDKDMKKQKNDKDSSEGSGSEPDDEYDSGSEKDASGTGESDPDEENIEPKKKESKEKKN 535
Query: 529 KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
K K +K + +K KD N PK+ +AY++WFN R +K+D G + ++AKK
Sbjct: 536 KREKKEKPVKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMKED--GDTLGDVAKKA 593
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETA 648
G WK++S+ +K E+++K + K Y +K YK++GGG K+ P+ KK
Sbjct: 594 GAKWKSMSADDKKEWNDKAAQDKARYEAEMKEYKKNGGG-------VEKASGPSTKK--- 643
Query: 649 STAVSPHK-VKSKEFI 663
S+ SP K KSKE I
Sbjct: 644 SSDQSPGKQFKSKEHI 659
>gi|308498523|ref|XP_003111448.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
gi|308240996|gb|EFO84948.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
Length = 702
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 270/673 (40%), Positives = 400/673 (59%), Gaps = 32/673 (4%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEF V E G L PG LK + VFK+ K K+ ++ D+ + WQKL +R
Sbjct: 4 LEFSNVFLENMGVLIPGTLKFDGTSAVFKSDK--KIVKVQVSDIKGIRWQKLGNKPGIRF 61
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
L++GS R GFK+++ +K+ SF +N+ + + + +L ++GWN+G + G + F
Sbjct: 62 ALQDGSSQRMGGFKDSDFEKVNSFTDSNWNVRIVQSDLFIKGWNYGHAEVKGKNILFSSE 121
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAFK 183
FEIP +VSQC KNE +EFH N+ SL+EMR Y+P + E+ +TD VE FK
Sbjct: 122 KQPLFEIPCTNVSQCVANKNEAILEFHQNENIPVSLMEMRLYMPVDPEMEDETDKVEEFK 181
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + T I + +I C TPRGRYDIK++ + LHGKT+DYKIP+ ++ R+
Sbjct: 182 KAVLAYAGLEAETEQPITLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKSINRL 241
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F +PHKDGR +FV+SL+PPI+QGQTRY +L F +++ EME+ ++ EL+EKY L
Sbjct: 242 FLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLVFEFVKEDDQEMEITLTD-ELEEKYGNNL 300
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
++L GP YE ++ + KV+ N K+TVPG F G++GT A+ C++K G +YP+E+GF+FI
Sbjct: 301 KRDLDGPLYENVSILFKVVCNLKVTVPGRFIGNSGTPAIQCNHKQNPGLLYPMEKGFLFI 360
Query: 364 HKPPIHIRFEEIATVNFARS--GGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
HKP ++IRFEEI++ +FARS G TR+FDFE++LK+G F+++EKEE KLFD++ +
Sbjct: 361 HKPVMYIRFEEISSCHFARSDAGTVTRTFDFEVDLKNGSSLMFNTMEKEENAKLFDYLNK 420
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDD---EDDEDEDESTDE 478
K ++++N+ + + N K D SSD+E +P Y A V E +D+ ++ DED D+
Sbjct: 421 KDIKIRNSTRID--NKKNDVDSSDEEHDP--YKATVTAEGRGKDNSDDDESTDEDYDLDK 476
Query: 479 DFNPDQAESDVAEEYDSNP-TPTDSDEDSDAS-EGTKKKKKEKS------RKTITISEKP 530
D + + D +E S P DS + DAS G + +E S + S +P
Sbjct: 477 DLKKQKVDRDSSEGSGSEPDDEYDSGSEEDASGTGESEPDEENSGNKKKKSEKTKKSREP 536
Query: 531 RKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
K K K ++K KD PK+ +AY +WF R K+D G + ++AKKGG
Sbjct: 537 MKPKLGKNGK-EKKEKKVKDPLEPKRATTAYFLWFQANRLSFKED--GDTVADVAKKGGA 593
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETAST 650
WK + S +K E++EK K K Y +K YK++ S S KPAKK T+
Sbjct: 594 KWKEMGSDDKKEWEEKAAKDKARYEAEMKEYKKN----GGGSSSASTSAKPAKKAPTS-- 647
Query: 651 AVSPHKVKSKEFI 663
SP K KSKE I
Sbjct: 648 --SPTKYKSKEHI 658
>gi|340374713|ref|XP_003385882.1| PREDICTED: FACT complex subunit SSRP1-like [Amphimedon
queenslandica]
Length = 412
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/410 (50%), Positives = 294/410 (71%), Gaps = 4/410 (0%)
Query: 23 LKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETEI 82
++I ++FK+ + K + ++D W ++ + L++ + G + +F+GFKE++
Sbjct: 1 MRIQSDGLIFKSSE--KTLNVKHSEIDLAEWLRVARGYELKVLSREGHVFKFSGFKESDY 58
Query: 83 DKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTG 142
+ FFK NF D+ + EL V+GWNWG F G++L+F V++ AFE+PL +VS+ T G
Sbjct: 59 GDLRDFFKQNFGKDLKQVELCVKGWNWGEPVFKGSLLTFLVDSKPAFEVPLEEVSRVTAG 118
Query: 143 KNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAV 202
KNEV++EFH ND AA SL+EMRF++PT G+ DPV++F D V +A ++ ATG+AIA
Sbjct: 119 KNEVSLEFHQNDTAAVSLMEMRFHVPTTGTDGEEDPVQSFHDKVQAKADILQATGNAIAS 178
Query: 203 FNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDP 262
F E+ CLTPRGRY IK++ +F HGKTFDYKIP S++ R+F LPH DGR F V+ LDP
Sbjct: 179 FTEMHCLTPRGRYTIKVYPTFLGAHGKTFDYKIPFSSITRLFMLPHNDGRHLFLVLGLDP 238
Query: 263 PIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVI 322
PI+QGQTRY F L DET E+ L SE++LKEKY GKL +E+ GP EV A++MKV+
Sbjct: 239 PIRQGQTRYPFFILQLENDETCELTLAMSEEDLKEKYGGKLTQEMEGPLMEVFARLMKVL 298
Query: 323 VNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR 382
V +K+ VPGSF+ + G +AV CS KA AG++YPLE+GF+F+HKP + I+FE+IA VNFAR
Sbjct: 299 VGKKLMVPGSFKNNNGQNAVACSCKATAGFLYPLEKGFMFVHKPALFIKFEDIANVNFAR 358
Query: 383 --SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTG 430
SGG +RSFDF+IE + GV+H FSS+ +++Y +L +F+ EK+L++K+ G
Sbjct: 359 MASGGVSRSFDFDIETREGVVHHFSSLMRDDYTRLHEFVTEKRLKIKDKG 408
>gi|341900759|gb|EGT56694.1| hypothetical protein CAEBREN_25379 [Caenorhabditis brenneri]
Length = 699
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/625 (40%), Positives = 379/625 (60%), Gaps = 13/625 (2%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEF V E G L G LK+TD+N+ F+ K GK + G D+ + WQKL LR+
Sbjct: 4 LEFPGVYVEDVGLLAIGTLKLTDKNLSFRGDKGGKSVTVAGSDIRKLKWQKLGNKPGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+G++HRF GFK+T++DK+ F + + + L ++GW++G + G + F+
Sbjct: 64 GCSDGAVHRFGGFKDTDLDKLKQFTDSAWSQSIEPSPLFIKGWSYGQAEVKGKNIEFNWE 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAFK 183
+ FEIP +VS T KNE +EFH ND + SL+EMRF+IP + E + D VE FK
Sbjct: 124 DKPIFEIPCTNVSNVTANKNEAVLEFHQNDASQISLMEMRFHIPVDGENEDEVDKVEEFK 183
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + I + +++ C TPRGRY+IK++ + LHGKT+DYKIPI ++ R+
Sbjct: 184 QAVLAFAGLEAEAEQPICLLSDVLCTTPRGRYEIKVYPTSIALHGKTYDYKIPIKSINRL 243
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F +PHKD R FFV+SL+PPI+QGQTRY +L + F +DE EMEL ++++L E G L
Sbjct: 244 FLVPHKDARSVFFVLSLNPPIRQGQTRYSYLIMDFQKDEEQEMELALTDEQL-ESSNGTL 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
+ + GP Y++++ + K + N K+T PG F G++GT AV CS++ AG++YPLE+GF+FI
Sbjct: 303 QRTMDGPIYKIVSALFKSLCNLKVTEPGRFVGNSGTPAVQCSHRQNAGFLYPLEKGFLFI 362
Query: 364 HKPPIHIRFEEIATVNFARSGGS--TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
HKP ++IRFE+I++ + ARS G TR+ DFE++LKSG F++++KEE KLFD++ +
Sbjct: 363 HKPAMYIRFEDISSCHLARSDGGTVTRTVDFEVDLKSGGPIIFNAMDKEENNKLFDYLNK 422
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES--TDED 479
K ++V+N + + G+ D + E D Y A VK E +DD DDE DE D+D
Sbjct: 423 KNIKVRNPARVDG---GRGAGAVDSDDEIDPYKAAVKAEGRAKDDSDDESTDEDYDLDQD 479
Query: 480 FNPDQAESDVAEEYDSNP-TPTDSDEDSDAS-EGTKKKKKEKSRKTITISEKPRKSKKDK 537
E D +E S P DS + D+S G + E+ ++ R+ K+
Sbjct: 480 LKRKAKEKDSSEGSASEPDDEYDSGSEQDSSGTGESEPDSEEDVPAKRQKKEKREKKEKS 539
Query: 538 ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSS 597
E G +K KD NAPK+ SAY++W N R +K++ G S ++AKKGG+ WKT+S+
Sbjct: 540 EKKEGKKGKKDKDPNAPKRATSAYLLWLNANRASLKEE--GDSVADVAKKGGQKWKTMSA 597
Query: 598 KEKAEYDEKVNKAKEDYNEALKAYK 622
+K E++ K K K Y +K YK
Sbjct: 598 DDKKEWEAKYEKEKVRYEAEMKEYK 622
>gi|17553930|ref|NP_498633.1| Protein HMG-4 [Caenorhabditis elegans]
gi|1174454|sp|P41848.1|SSP1A_CAEEL RecName: Full=FACT complex subunit SSRP1-A; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1-A; AltName: Full=HMG box-containing protein 4;
AltName: Full=Structure-specific recognition protein 1-A
gi|351061300|emb|CCD69078.1| Protein HMG-4 [Caenorhabditis elegans]
Length = 697
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/640 (40%), Positives = 391/640 (61%), Gaps = 37/640 (5%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
L+F V E G L G LK+T++++ FK K GK + G D+D + WQKL LR+
Sbjct: 4 LQFPGVYVEDVGHLAFGTLKLTEKSLNFKGDKGGKSVNVTGSDIDKLKWQKLGNKPGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
L +G HRF GFK+T+++KI SF +N+ + + L ++GWN+G + G + F
Sbjct: 64 GLNDGGAHRFGGFKDTDLEKIQSFTSSNWSQSIDQSNLFIKGWNYGQAEVKGKTVEFSWE 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAFK 183
+ FEIP +VS KNE +EFH ND++ L+EMRF++P + E D D VE FK
Sbjct: 124 DKPIFEIPCTNVSNVIANKNEAVLEFHQNDDSKVQLMEMRFHMPIDLENEEDADKVEEFK 183
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + T I + +I C TPRGRYDIK++ + LHGKT+DYKIPI ++ R+
Sbjct: 184 KAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSINRL 243
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F +PHKDGR +FV+SL+PPI+QGQTRY +L F +DE ++EL ++++L E G L
Sbjct: 244 FLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLIFEFGKDEEQDLELALTDEQL-ESSNGNL 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
++++GP YE ++ + K I N KITVPG F G +GT A+ C+++ G +YP+E+GF+FI
Sbjct: 303 RRDMTGPIYETISILFKSICNLKITVPGRFLGSSGTPAIQCTHRQNPGLLYPMEKGFLFI 362
Query: 364 HKPPIHIRFEEIATVNFAR--SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
HKP ++IRFEEI++ +FAR SG TR+FDFEI+LK G TF+++EKEE KLFD++ +
Sbjct: 363 HKPAMYIRFEEISSCHFARSDSGTVTRTFDFEIDLKYGGPLTFNAMEKEENNKLFDYLNK 422
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER----------------D 465
K ++++N+ + E N D SSDDE +P Y A V E +R D
Sbjct: 423 KNIKIRNSQRVE--NTVAD--SSDDEIDP--YKAAVTAEGRQRDDSDDDSTDEDYDLDKD 476
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTIT 525
+ +++ ES++ + E D E DS+ T +S+ DS+ +K++K E K
Sbjct: 477 IKKKKEDKESSEGTGSEPDDEYDSGSEQDSSGT-GESEPDSEQDVPSKRRKGEPKEKR-- 533
Query: 526 ISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIA 585
+ K+ +E G +K KD NAPK+ SAYM WF R ++K+D G S ++A
Sbjct: 534 ------EKKEKREKKEGKKGKKDKDPNAPKRATSAYMQWFLASRNELKED--GDSVADVA 585
Query: 586 KKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
KKGG WKT+SS +K +++EK + K Y + +K Y+++G
Sbjct: 586 KKGGAKWKTMSSDDKKKWEEKAEEDKSRYEKEMKEYRKNG 625
>gi|268575214|ref|XP_002642586.1| C. briggsae CBR-HMG-4 protein [Caenorhabditis briggsae]
Length = 696
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/640 (38%), Positives = 385/640 (60%), Gaps = 41/640 (6%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
+EF V E G L G LK+TD+++ FK++K G+ + G D+D + WQKL LR+
Sbjct: 4 MEFPGVYLEDMGLLALGTLKLTDKSLSFKSEKGGRSVTVAGDDIDGLKWQKLGNKPGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+ +G++HRF G ++ +++++ F ++ + + L ++GW++G + G + F
Sbjct: 64 GVNDGNVHRFGGLQDADLERLQKFTDAHWSRPIEQSNLFIKGWSYGQAEVKGRNIEFSWE 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAFK 183
+ FEIP +VS T KNE +EFH ND A +L+EMRF++P + E D D VE FK
Sbjct: 124 DKPIFEIPCTNVSNVTANKNEAVLEFHQNDNAQIALMEMRFHMPVDAETEEDVDKVEEFK 183
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + T I + +I C TPRGRYDIK++ + LHGKT+DYKIPI ++ R+
Sbjct: 184 KAVLAYAGLEAETEQPIVLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSINRL 243
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F +PHKDGR FFV+SL+PPI+QGQTRY +L + F +DE E+EL ++++L+E G L
Sbjct: 244 FLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQELELSLTDEQLEES-NGAL 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
+ + GP Y+ ++ + K I N KIT PG F GH+GT A+ C+++ G +YPLE+GF+FI
Sbjct: 303 KRTMDGPIYKTVSVVFKAICNLKITEPGRFIGHSGTPAIQCTHRQNPGLLYPLEKGFLFI 362
Query: 364 HKPPIHIRFEEIATVNFARSGGS--TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
HKP +++R+E++++ + ARS G TR+ DFE+++KSG F+++EKEE KLFD++ +
Sbjct: 363 HKPAMYLRYEDVSSCHLARSDGGTVTRTVDFEVDMKSGGPIIFNTMEKEENNKLFDYLSK 422
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD------------ 469
K ++++N + + + SSDDE +P Y A VK E +RD+ DD
Sbjct: 423 KNIKIRNPTRVDARAAE----SSDDEIDP--YKAAVKAEGRKRDESDDDESTDEDYDLDK 476
Query: 470 -------EDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK 522
+++D S PD E D E DS+ T +S+ DS+ +KK+K + K
Sbjct: 477 DLKDRKTKEKDSSEGSASEPDD-EYDSGSEQDSSGT-GESEPDSEEDVPSKKRKSDPKEK 534
Query: 523 TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
+ K+ KE GG +K+KD NAPK+ SAY WFN R +K+D G S
Sbjct: 535 R--------EKKEKKEKEGGKKGKKEKDPNAPKRAQSAYFHWFNANRLSLKED--GDSVA 584
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
++AKK G WKT+ +++K E++ K K K Y +K Y+
Sbjct: 585 DVAKKAGAKWKTLGAEDKKEWEAKAEKDKTRYETEMKEYR 624
>gi|308467293|ref|XP_003095895.1| CRE-HMG-4 protein [Caenorhabditis remanei]
gi|308244266|gb|EFO88218.1| CRE-HMG-4 protein [Caenorhabditis remanei]
Length = 737
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/609 (39%), Positives = 371/609 (60%), Gaps = 24/609 (3%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LEF + E G L G LK+ ++++ FK++K GK ING D+D + WQKL LR+
Sbjct: 4 LEFPGIYVEDVGLLAMGTLKLNEKSLSFKSEKGGKSVNINGDDIDGLKWQKLGNKPGLRV 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+ +G++HRF GFK+T+++K+ F + + + L ++GW++G + G + F
Sbjct: 64 GVSDGAVHRFGGFKDTDLEKLQKFTDAAWSQPIEQSNLFIKGWSYGQAEVKGRNIEFSWE 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTN-EIAGDTDPVEAFK 183
+ FEIP +VS T KNE +EFH ND + SL+EMRF++P + E D D VE FK
Sbjct: 124 DKPIFEIPCTNVSNVTANKNEAVLEFHQNDNSQVSLMEMRFHMPVDAETEDDVDKVEEFK 183
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + I + +I C TPRGRYDIK++ + LHGKT+DYKIPI ++ R+
Sbjct: 184 KAVLAFAGLEAEAEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSINRL 243
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F +PHKDGR FFV+SL+PPI+QGQTRY +L + F +DE ++EL ++++L + G L
Sbjct: 244 FLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQDLELALTDEQLAQS-NGAL 302
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
++ + G Y+ ++ I K I N KIT PG F GH+GT A+ C+++ G +YPLE+GF+FI
Sbjct: 303 ERTMEGALYKTVSAIFKSICNLKITEPGRFIGHSGTPAIQCTHRQNPGLLYPLEKGFLFI 362
Query: 364 HKPPIHIRFEEIATVNFARSGGS--TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
HKP ++IRFE++++ + ARS G TR+ DFE++LKSG F+++EKEE KLFD++ +
Sbjct: 363 HKPAMYIRFEDVSSCHLARSDGGTVTRTVDFEVDLKSGAPIIFNAMEKEENNKLFDYLSK 422
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER--DDEDDEDEDESTDED 479
K ++++N P E + ++EPD Y A VK E ++ D +D+ DED D+D
Sbjct: 423 KSIKIRN------PARVESRAAESSDEEPDRYKAAVKAEGLQKDDDSDDETDEDYDLDQD 476
Query: 480 FNPDQAESDVAE--------EYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPR 531
+ E D +E EYDS S E + +KS+++ ++ +
Sbjct: 477 LKRKKTEKDSSEGSASEPDDEYDSGSEQDSSGTGESEPESESETPAKKSKRSEPREKREK 536
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K KK+ + +K+KD NAPK+ +AY WF R KIK+D G S ++AKKGG
Sbjct: 537 KEKKEGKRG--KKDKKEKDPNAPKRASTAYFQWFTANRLKIKED--GDSVADVAKKGGAK 592
Query: 592 WKTVSSKEK 600
WK++S++EK
Sbjct: 593 WKSMSAEEK 601
>gi|255552860|ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific recognition protein, putative [Ricinus communis]
Length = 640
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/641 (36%), Positives = 354/641 (55%), Gaps = 36/641 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S RG PG+LK+ I++K + GK +++ D+ + W K+ T
Sbjct: 1 MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF++ + + SFF++N I + EK+LSV G NWG GN+L+
Sbjct: 61 QLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP+N +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V +A+ F+ + LTPRGRY +++ SF +L G+
Sbjct: 181 GDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F +++LDPPI++GQT Y + L F+ D + L +
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTLTMN 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E L KY+ KL+ G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EDLLSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSG-GST--RSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R GS+ FD I LK+ H F +I+
Sbjct: 361 LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHATGSSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY LFDFI K L++ N G + N +DD+ D +L R+K EA + DE+
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDMKTTNGVAAVLQNDDDDAVDPHLERIKNEAGDESDEE 480
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTD--SDEDSDAS---EGTKKK-KKEKSRK 522
D SD + D +PTD +EDSD S +GT+K +KE +++
Sbjct: 481 D-----------------SDFVADKDDGGSPTDDSGEEDSDGSLSGDGTEKHVRKESTKE 523
Query: 523 TITISEKPRKSKKDKESSG-GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
+ P+K KD G ++KKKD NAPKK MS +M + RE +KK NPGI+F
Sbjct: 524 PSSSKAAPKKRSKDGNDDGKKKKQKKKKDPNAPKKAMSGFMFFSQMERENVKKSNPGIAF 583
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
++ K G+ WK +S++EK Y+ K K+ Y E + YK
Sbjct: 584 GDVGKILGDKWKKLSAEEKEPYEAKARADKKRYKEEVSGYK 624
>gi|356496334|ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/634 (37%), Positives = 348/634 (54%), Gaps = 22/634 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F ++ RG PG++KI I++K + GK+ +++ D+ V W K+ +
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF++ ++ + +FF+ I V EK+LSV G NWG GN+L+
Sbjct: 61 QLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP + +
Sbjct: 121 FTVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V DAI F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F +ISLDPPI++GQT Y + + F D E EL +
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E KY+ KLD G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EDLYNTKYKDKLDLSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LKS H F +I+
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY L++FI K L++ N G + + +DD+ D +L R+K EA D+ D
Sbjct: 421 RNEYHNLYEFISSKGLKILNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAG-GDESD 479
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISE 528
+ED D D+D D+ S + + TDS E K KKE + + +
Sbjct: 480 EEDSDFVADKD---DEG-SPTDDSGADDSDATDS-----GDEKEKPAKKESKKDLPSKAS 530
Query: 529 KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
+K KD E ++K+KD NAPK+ MS +M + RE +KK NPGISFT++++
Sbjct: 531 TSKKKSKDDEDGKKRKQKKRKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVSRVL 590
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
GE WK +S +EK Y+ K + K+ Y + + YK
Sbjct: 591 GEKWKKLSVEEKEPYEAKAREDKKRYKDEISGYK 624
>gi|324504618|gb|ADY41993.1| FACT complex subunit SSRP1-A [Ascaris suum]
Length = 422
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 233/303 (76%), Gaps = 4/303 (1%)
Query: 161 IEMRFYIPTNEIAGDTDP-VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+EMRF+IPT+ A + VE F+ +VM A + T +A +I C TPRGRYDIK+
Sbjct: 1 MEMRFHIPTDPDADEDADPVEEFRRAVMQYAGIETETDQPVATLQQILCTTPRGRYDIKV 60
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ + LHGKT+DYKIPI T++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F
Sbjct: 61 YQNHLSLHGKTYDYKIPIKTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFA 120
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
+DE E++L ++++LKE+Y+GKLDK+LSG +EV++KI +V+V+ KITVPGSF GH+GT
Sbjct: 121 KDEEVELDLGLTQEQLKEQYKGKLDKKLSGNVFEVVSKIFRVMVDMKITVPGSFVGHSGT 180
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSG 399
A+ C++K A+G++YPLE+GF+++HKPP++IRFEEI++VNFARS STRSFDFE+E+K G
Sbjct: 181 PAIMCAHKQASGFLYPLEKGFVYVHKPPMYIRFEEISSVNFARSDVSTRSFDFEVEMKGG 240
Query: 400 VLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKED-FGSSDDEKEPDAYLARVK 458
F+S+EKEEY +LFDF+ K LR++N + +KPNY ED F SDDE +P Y VK
Sbjct: 241 STLVFNSVEKEEYNRLFDFVNNKHLRIRNAKRMDKPNYSEDKFAGSDDEIDP--YKETVK 298
Query: 459 REA 461
+EA
Sbjct: 299 QEA 301
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/377 (51%), Positives = 270/377 (71%), Gaps = 13/377 (3%)
Query: 255 FFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEV 314
FFVISLDPPIKQGQTRYHFL LLF++DE + L +E+E+++++EG+L K +SG YE+
Sbjct: 5 FFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEM 64
Query: 315 MAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEE 374
++++MK +VNRKITVPG+F+GH+G +TCSYKA++G +YPLERGFI++HKPP+HIRF+E
Sbjct: 65 VSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDE 124
Query: 375 IATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEK 434
I+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+ KKL +KN G E
Sbjct: 125 ISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEG 184
Query: 435 PNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES---TDEDFNPDQAESDVAE 491
N D + DE + DAYL R+K E R++ ++ D+S TDE FNP + E DVAE
Sbjct: 185 MNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEEEEDVAE 244
Query: 492 EYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDK 551
E+DSN + + S ++ D+ +++K++ + K RKS+K +K KD
Sbjct: 245 EFDSNASASSSSKEGDSD----REEKKRKQLKKAKMAKDRKSRKKPLEV-----KKGKDP 295
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK +S ++K E+D K A+
Sbjct: 296 NAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKAEDAR 355
Query: 612 EDYNEALKAYKESGGGQ 628
+Y +A+K Y E G G+
Sbjct: 356 REYEKAMKEY-EGGRGE 371
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 343/642 (53%), Gaps = 36/642 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + + +S RG PG+LK + I +K + GK +++ D+ V W K+ +
Sbjct: 1 MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L I +K+G ++F GF++ +I + FF++N I EK+LSV G NWG GN+L+
Sbjct: 61 QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIP-TN-EIA 173
F V + AFE+ L DV+Q GKN+V +EFH +D +SL+E+ F+IP TN +
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD P + F+D +M+ A V +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + L F D + L
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ KY+ KL+ G +EV I++ + KIT PG FR AV S KA G
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F +I+
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY LFDFI K L++ N G + + DD+ D +L R++ EA
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG------ 474
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEK-----SRKT 523
DES +ED SD + D +PTD D+ +KEK ++K
Sbjct: 475 ---GDESDEED-------SDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKD 524
Query: 524 ITISEKPRKSKKDKESSGGS---TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS 580
+ S+ P K K + + GS ++KKKD NAPK+ +S +M + RE IKK NPGIS
Sbjct: 525 PSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGIS 584
Query: 581 FTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
FTE+ + G+ W +S++EK Y+ K K+ Y E + YK
Sbjct: 585 FTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYK 626
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 348/641 (54%), Gaps = 34/641 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F ++ RG PG++KI I++K + GK ++ D+ V W K+ T
Sbjct: 1 MTDGHLFNNITLGXRGGTNPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGVTWMKVPKTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G L++F GF++ ++ + +FF+ F I V EK+LSV G NWG GN+L+
Sbjct: 61 QLGVQIKDGLLYKFTGFRDQDVVSLTNFFQNTFGITVEEKQLSVTGRNWGEVDLNGNMLA 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+EM F+IP++ +
Sbjct: 121 FMVGSKQAFEVSLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + + F+D +M+ A V DA+ F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPSAQVFRDKIMSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F +ISLDPPI++GQT Y + + F D + EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSELAIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E KY+ KL+ G +EV +++ + K+T PG+FR AV S KA G
Sbjct: 301 EDLYNSKYKDKLELSYKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LKS H F +I+
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKP-NYKEDFGSSDDEKEPDAYLARVKREAAERDDE 467
+ EY L+ FI K L++ N ++ +DD+ D +L R++ EA D+
Sbjct: 421 RNEYHNLYGFISSKGLKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAG-GDES 479
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED-SDASEG---TKKKKKEKSRKT 523
D+ED D D+D D DS D SDAS+ T+K K++ +K
Sbjct: 480 DEEDSDFVIDKD--------------DGGSPTDDSGADVSDASQSGGETEKPAKKEPKKD 525
Query: 524 ITISEKPRKSKKDKESSGG--STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
++ K K G ++KKKD NAPK+ +S +M + RE +KK NPGISF
Sbjct: 526 LSSKASSSKKKSKDADVDGVKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISF 585
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
T++ + GE WK +S++EK Y+ K K+ Y + + YK
Sbjct: 586 TDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYK 626
>gi|297815172|ref|XP_002875469.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
gi|297321307|gb|EFH51728.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
Length = 645
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 357/644 (55%), Gaps = 37/644 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT++ F +S RG PG LKI I +K + GK +++ D+ V+W K+ +
Sbjct: 1 MTDSHSFNSISLSGRGGTNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF++ ++ + SFF++++ EK+LS+ G NWG GN L+
Sbjct: 61 RLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPEEKQLSISGRNWGEVDLHGNTLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GK++VT+EFH +D A +SL+E+ F+IP++ +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQIQGKDDVTLEFHVDDTAGANEKDSLMEICFHIPSSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P F D+++ A V + DA+ F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPSHVFNDTIVAMADVSSGVEDAVVTFDSIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F VISLDPPI++GQT Y + + F D E EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
+ + K++ KL++ G +EV +++ + KIT PG FR AV S KA G
Sbjct: 301 DDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIE 408
+YPLE+GF F+ KPP I +EI V F R G + FD I LK+ H F +I+
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE 467
+ EY L+ FI K L++ N G G G DD+ D +L R+K +AA+ DE
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTTDGVAAVLGDDDDDDAVDPHLERIKNQAADESDE 480
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG--------TKKKKKEK 519
+DED D+D +PT ++DSDASEG KK+ K++
Sbjct: 481 EDEDFVMGEDDD--------------GGSPTDDSGEDDSDASEGGGGEKEKSIKKEPKKE 526
Query: 520 SRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDM-REKIKKDNPG 578
+ + + K + S D+ SS +KKKD NAPK+ MS + M+F+ M R+ IKK++PG
Sbjct: 527 ASSSKGLPHKRKVSAADEGSSKRKKPKKKKDPNAPKRAMSGF-MYFSQMERDNIKKEHPG 585
Query: 579 ISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
I+F E+ K G+ W+ +S++EK Y+ K K+ Y + + YK
Sbjct: 586 IAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKQRYKDEISDYK 629
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 227/634 (35%), Positives = 344/634 (54%), Gaps = 48/634 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F ++ RG PG++KI IV+K + GK+ +++ D+ V W K+ +
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF++ ++ + +FF+ I V EK+LSV G NWG GN+L+
Sbjct: 61 QLGVQIKDGLYYKFTGFRDQDVVTLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP + +
Sbjct: 121 FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V DAI F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F +ISLDPPI++GQT Y + + F D E EL +
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAIN 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E K++ KL+ G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EDLYNTKFKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LKS H F +I+
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY L++FI K L++ N G + + +DD+ D +L R+K EA E + ++
Sbjct: 421 RNEYHNLYEFISSKGLKIMNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGEDESDE 480
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISE 528
++ + + +D + +PT +DSDA++ +K E
Sbjct: 481 EDSDFVADKDD--------------EGSPTDDSGADDSDATDSGDEK------------E 514
Query: 529 KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
KP K + +KE KD NAPK+ MS +M + RE +KK NPGISFT++ +
Sbjct: 515 KPAKKESNKE----------KDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVL 564
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
GE WK +S++EK Y+ K + K+ Y + + YK
Sbjct: 565 GEKWKKLSAEEKEPYEAKAREDKKRYMDEISGYK 598
>gi|357492685|ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1 [Medicago truncatula]
Length = 648
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 231/651 (35%), Positives = 347/651 (53%), Gaps = 17/651 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F ++ RG PG++KI I++K + GK +++ D+ V W K+ +
Sbjct: 1 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKSDIVSVTWMKVPKSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF++ ++ + SFF+ F I V EK+LSV G NWG GN+L+
Sbjct: 61 QLGVQIKDGLFYKFTGFRDQDVVSLTSFFQNTFGITVKEKQLSVSGRNWGEVDLNGNMLA 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+PL DVSQ GKN+V +EFH +D +SL+E+ F+IP + +
Sbjct: 121 FMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +++ A V DA+ F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENCPPAQVFRDKIISVADVGAGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F VISLDPPI++GQT Y + + F D E EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVESELALS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E K++ +L+ G +EV +++ + K+T PG FR AV S KA G
Sbjct: 301 EDLYNSKFKDRLELSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LKS H F +I+
Sbjct: 361 ILYPLEKSFFFLPKPPTLITHEEIDYVEFERHAAGGSNMHYFDLLIRLKSDQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY L+ FI K L++ N G + DD+ D +L R++ EA E + ++
Sbjct: 421 RNEYHNLYGFISSKGLKIMNLGDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAGEDESDE 480
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISE 528
++++ + + D+ D + DE ++ KK T +
Sbjct: 481 EDEDFVAEKD----DEGSPTDDSGADDSDASQSGDEKEIPAKKEPKKDLSSKASASTSTS 536
Query: 529 KPRKSKKDKESSG-GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKK 587
+K KD + G ++KKKD NAPK+ MS +M + RE IKK NPGISFT++AK
Sbjct: 537 TSKKKSKDADEDGKKKKQKKKKDPNAPKRGMSGFMFFSQMERENIKKANPGISFTDVAKL 596
Query: 588 GGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
GE WK +S++EK Y+ K K+ Y + Y + D G S S
Sbjct: 597 LGENWKKMSAEEKEPYEAKARVDKKRYEDEKIVYNAQPQPMNIDSGNESDS 647
>gi|224141351|ref|XP_002324036.1| high mobility group family [Populus trichocarpa]
gi|222867038|gb|EEF04169.1| high mobility group family [Populus trichocarpa]
Length = 610
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 231/634 (36%), Positives = 336/634 (52%), Gaps = 51/634 (8%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +A F +S RG PG+LKI+ I +K + GK +++ D+ V W K+ T
Sbjct: 1 MADAHLFNNISLGGRGGTNPGQLKISSGGIQWKKQGGGKAVEVDRTDIVGVTWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K G ++F GF++ ++ + +FF+++ I EK+LSV G NWG GN+L+
Sbjct: 61 QLSVLIKGGPWYKFTGFRDQDLSTLTNFFQSH-GITPEEKQLSVSGRNWGEVDLNGNMLT 119
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP N +
Sbjct: 120 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMELSFHIPNNNTQYI 179
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D ++ +A V +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 180 GDENHPPAQVFRDLIVQRADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + L F+ D + L S
Sbjct: 240 DFKIQYSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVLQFDTDFVVQSNLSMS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E L KY+ KL+ G +EV +M+ + K+T PG FR AV S KA G
Sbjct: 300 EDLLYTKYKDKLEPSYKGLIHEVFTTVMRGLSAAKVTRPGKFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F +I+
Sbjct: 360 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 419
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY LFDFI K L++ N G + +DD+ D +LAR++ EA D
Sbjct: 420 RNEYHNLFDFISGKGLKIMNLGDMQTTKGVAAVLQNDDDDAVDPHLARIRNEAG-----D 474
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISE 528
DE +DE+ NPT D ++ +S+ T K
Sbjct: 475 DESDDEAM-----------------KVNPTKKDFKREASSSKATTK-------------- 503
Query: 529 KPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
RKS+ +ES +KKKD NAPK+ SAYM + RE ++K NPGI F EIAK
Sbjct: 504 --RKSRDGEESQKKRKPKKKKDPNAPKRSKSAYMFFSQMERENVRKSNPGIVFGEIAKAL 561
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+ W +S++EK Y+E K+ Y + YK
Sbjct: 562 ADKWNAMSAEEKEPYEEMARNDKKRYKLQVNDYK 595
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 236/660 (35%), Positives = 358/660 (54%), Gaps = 37/660 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M+E F +S RG PG+L++ I++K + GK +++ D+ V W K+ T
Sbjct: 1 MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF+E ++ + +FF+ + J+ EK+LSV G NWG GN+L+
Sbjct: 61 QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGJNPEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP + +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + + F D + EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E+ L KY+ KL+ G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EELLNXKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F +I+
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY LFDFI K L++ N G + + +DD+ D +L R+K EA
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGD---- 476
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTD--SDEDSDASEGTKKKKKEKSRKTITI 526
E + DEDF D+ D +PTD +E+SDASE +K+K +++
Sbjct: 477 ---ESDEEDEDFVLDK---------DDGGSPTDDSGEEESDASESGGEKEKPSKKESKKE 524
Query: 527 SEKPRKSKK-------DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI 579
+ S D++ S ++KKKD NAPK+ MS +M + RE IKK PGI
Sbjct: 525 PSVSKASSSKKKPKDGDEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGI 584
Query: 580 SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSK 639
+FTE+ + G+ WK ++++EK Y+ K K+ Y + + YK + + D G S S+
Sbjct: 585 AFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDSE 644
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 236/660 (35%), Positives = 358/660 (54%), Gaps = 37/660 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M+E F +S RG PG+L++ I++K + GK +++ D+ V W K+ T
Sbjct: 1 MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF+E ++ + +FF+ + ++ EK+LSV G NWG GN+L+
Sbjct: 61 QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+V +EFH +D +SL+E+ F+IP + +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + + F D + EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E+ L KY+ KL+ G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EELLNSKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F +I+
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
+ EY LFDFI K L++ N G + + +DD+ D +L R+K EA
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGD---- 476
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTD--SDEDSDASEGTKKKKKEKSRKTITI 526
E + DEDF D+ D +PTD +E+SDASE +K+K +++
Sbjct: 477 ---ESDEEDEDFVLDK---------DDGGSPTDDSGEEESDASESGGEKEKPSKKESKKE 524
Query: 527 SEKPRKSKK-------DKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI 579
+ S D++ S ++KKKD NAPK+ MS +M + RE IKK PGI
Sbjct: 525 PSVSKASSSKKKPKDGDEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGI 584
Query: 580 SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSK 639
+FTE+ + G+ WK ++++EK Y+ K K+ Y + + YK + + D G S S+
Sbjct: 585 AFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDSE 644
>gi|326513318|dbj|BAK06899.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 655
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 223/670 (33%), Positives = 349/670 (52%), Gaps = 54/670 (8%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + R G+ K+ + +K + GK +I+ DL V W K+ +
Sbjct: 1 MTDGHHFNNILLGGRAGTNLGQFKVHSGGLAWKRQGGGKTIEIDKADLTSVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G + F GF+E ++ + +F + N I EK+LSV G NWG G++L+
Sbjct: 61 QLGVRVKDGLSYTFIGFREQDVSSLINFMQKNMGISPDEKQLSVGGHNWGMIDIDGSMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE L DVSQ GK +V +EFH +D +SL++M F++PT+ +
Sbjct: 121 FMVGSKQAFEFSLADVSQTQLQGKTDVLLEFHVDDTTGANEKDSLMDMSFHVPTSNTQFP 180
Query: 174 GDTDPVEA--FKDSVMNQA-SVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
G+ + A ++++ +A + ++G+A+ F I LTPRGRY + + SF +L G+
Sbjct: 181 GNENRTSAQILLEAILERADTSSGSSGEAVVTFEGIAILTPRGRYAVDLHLSFLRLQGQA 240
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
D+KI S+++R+F LP + V++LDPPI++GQT Y + + F + + +
Sbjct: 241 NDFKIQYSSIVRLFLLPKSNNPHTIVVVTLDPPIRKGQTLYPHIVIQFETETVVQKNMKL 300
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
S + L EKY+ +L++ G +EV K+++ + K+T PGSFR + AV S KA
Sbjct: 301 SRELLDEKYKDRLEESYQGLVHEVFVKVLRGLSGAKVTRPGSFRSYKNGYAVKSSLKAED 360
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFS 405
G +YPLE+GF F+ KPP I EEI V F R G S++ FD ++L + H F
Sbjct: 361 GLLYPLEKGFFFLPKPPTLILHEEIEFVEFQRHGAGGASMSSQYFDLLVKLTNDQEHLFR 420
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD 465
+I++ EY LF+FI K L+V N G G+ + D D+ PD +L R+K +A +
Sbjct: 421 NIQRSEYHNLFNFINGKGLKVMNLGDGQGTSGVTDVLRDTDDVAPDPHLERIKNQAVSSE 480
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTIT 525
D+EDED +D +PT E+SDASE +KEKS K
Sbjct: 481 ASDEEDEDFVLHKDDG-------------GSPTDDSGGEESDASE--SGGEKEKSSKKEA 525
Query: 526 ISEKPRKSKKDKESSG-GSTKRKKKDKNA----------------PKKPMSAYMMWFNDM 568
S KP +K K G GS KRK K K+ PK+PM +M +
Sbjct: 526 RSSKPPVKRKPKGKDGEGSEKRKPKGKDGEGSEKRKPKKKKDPNAPKRPMMPFMYFSMAE 585
Query: 569 REKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK------ 622
R +K NP ++ T++AKK GE+W+ +S+++K Y + K+ Y + AY+
Sbjct: 586 RAGVKDSNPDLAPTDVAKKLGEMWQKMSTEDKQPYILQSQADKKRYEKESAAYRAAAPVD 645
Query: 623 -ESGGGQDSD 631
++G G SD
Sbjct: 646 VDAGSGNGSD 655
>gi|15228471|ref|NP_189515.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
gi|26454672|sp|Q05153.2|SSRP1_ARATH RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=High mobility group B protein 8; AltName:
Full=Nucleosome/chromatin assembly factor group D 08;
Short=Nucleosome/chromatin assembly factor group D 8;
AltName: Full=Recombination signal sequence recognition
protein 1
gi|11994780|dbj|BAB03170.1| structure-specific recognition protein 1 (HMG1 DNA-binding protein)
[Arabidopsis thaliana]
gi|27311803|gb|AAO00867.1| recombination signal sequence recognition protein, putative
[Arabidopsis thaliana]
gi|332643963|gb|AEE77484.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
Length = 646
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 233/644 (36%), Positives = 349/644 (54%), Gaps = 36/644 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + F +S RG PG LKI I +K + GK +++ D+ V+W K+ +
Sbjct: 1 MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF++ ++ + SFF++++ EK+LSV G NWG GN L+
Sbjct: 61 QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+VT+EFH +D A +SL+E+ F+IP + +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F D+++ A V DA+ F I LTPRGRY++++ SF +L G+
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F VISLDPPI++GQT Y + + F D E EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ + K++ KL++ G +EV +++ + KIT PG FR AV S KA G
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIE 408
+YPLE+GF F+ KPP I +EI V F R G + FD I LK+ H F +I+
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE 467
+ EY L+ FI K L++ N G G G +DD+ D +L R++ +AA+ DE
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQAADESDE 480
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK----- 522
+DED D+D +PT +DSDASEG + KEKS K
Sbjct: 481 EDEDFVMGEDDD--------------GGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKK 526
Query: 523 ----TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG 578
+ + K + D+ SS +KKKD NAPK+ MS +M + R+ IKK++PG
Sbjct: 527 EASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPG 586
Query: 579 ISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
I+F E+ K G+ W+ +S+ +K Y+ K K+ Y + + YK
Sbjct: 587 IAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYK 630
>gi|242056143|ref|XP_002457217.1| hypothetical protein SORBIDRAFT_03g003450 [Sorghum bicolor]
gi|241929192|gb|EES02337.1| hypothetical protein SORBIDRAFT_03g003450 [Sorghum bicolor]
Length = 639
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 347/641 (54%), Gaps = 35/641 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT F + RG PG+ K+ + +K + GK +I+ D+ V W K+ +
Sbjct: 1 MTGGHHFNNILLGGRGGTNPGQFKVYSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G +RF GF+E ++ + +F + N + EK+LSV G NWGG GN+L+
Sbjct: 61 QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DV+Q GK +V +E H +D +SL+++ F++PT+ +
Sbjct: 121 FMVGSKQAFEVSLADVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P ++++ A V ++ + + F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPPAHILWETILKFADV-GSSEEPVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+++R+F LP + F VI+LDPPI++GQT Y + + F + E +L S
Sbjct: 240 DFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L +KY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 300 KELLVDKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS-----FDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISFHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
I++ EY LF+FI K +++ N G+G + +DD+ D +L R+K +A +
Sbjct: 420 IQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAV-DPHLERIKNQAGD 478
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE--GTKKKKKEKSR 521
E + DEDF D+ +S +PT DEDSDAS+ G K+K +K
Sbjct: 479 D-------ESDEEDEDFVADKDDS-------GSPTDDSGDEDSDASDSGGEKEKSSKKEA 524
Query: 522 KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
+ +K + +D E +KKKD NAPK+ M+ +M + R +K NP +
Sbjct: 525 SSSKPVQKRKPKARDDEGHEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPT 584
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
TEIAKK GE+W+ +SS+EK Y ++ K+ Y + Y+
Sbjct: 585 TEIAKKLGEMWQKMSSEEKQPYIQQAQVDKKRYEKESAVYR 625
>gi|115434958|ref|NP_001042237.1| Os01g0184900 [Oryza sativa Japonica Group]
gi|75263890|sp|Q9LGR0.1|SSP1A_ORYSJ RecName: Full=FACT complex subunit SSRP1-A; AltName: Full=Early
drought-induced protein R1G1A; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1-A;
AltName: Full=Recombination signal sequence recognition
protein 1-A
gi|9558422|dbj|BAB03358.1| putative SSRP1 protein [Oryza sativa Japonica Group]
gi|113531768|dbj|BAF04151.1| Os01g0184900 [Oryza sativa Japonica Group]
gi|215694954|dbj|BAG90145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617877|gb|EEE54009.1| hypothetical protein OsJ_00664 [Oryza sativa Japonica Group]
Length = 641
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 352/651 (54%), Gaps = 35/651 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + R PG+ K+ + +K + GK +I DL V W K+ +
Sbjct: 1 MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF+E ++ + +F + N + EK+LSV G NWGG GN+L+
Sbjct: 61 QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + + +++M A V +++ +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRTAAQVLWETIMGVADV-DSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+++R+F LP + F V++LDPPI++GQT Y + + F + E L +
Sbjct: 240 DFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALT 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L EKY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 300 KEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSD-DEKEPDAYLARVKREAAERD 465
I++ EY LF+FI K L++ N G G+ D D+ D +L R+K +A +
Sbjct: 420 IQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDE- 478
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTIT 525
E + DEDF D+ +S +PT EDSDASE +K+K S+K +
Sbjct: 479 ------ESDEEDEDFVADKDDS-------GSPTDDSGGEDSDASESGGEKEK-LSKKEAS 524
Query: 526 ISEKPRKSK---KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
S+ P K K +D+E S +KKKD NAPK+ M+ +M + R +K +NP + T
Sbjct: 525 SSKPPVKRKPKGRDEEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTT 584
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
EIAKK GE+W+ ++ +EK Y ++ K+ Y + Y+ D D G
Sbjct: 585 EIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRYEKESAVYR-GAAAMDVDSG 634
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 229/662 (34%), Positives = 348/662 (52%), Gaps = 49/662 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +A +F + RG PG+LKI+ + ++ GKV + D+ V+W ++ ++
Sbjct: 1 MGDAHQFNNILLGGRGGANPGQLKISSKGFSWRKSGGGKVVDVAKDDVKSVSWTRVSRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+ I LK GS +F GF+E ++ + +F +N + +K L+V G NWG + GN LS
Sbjct: 61 QMSIRLKAGSNVKFTGFREQDVSSLNTFITSNIGVTPQDKPLAVSGRNWGEAELEGNTLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAE--SLIEMRFYIPTNE--IAGD 175
F V AFEI + D+S GKN+V +EFH +D A E +L+EM F++P+ GD
Sbjct: 121 FVVGGKPAFEICVADISNTQVQGKNDVQMEFHVDDTANEKDTLMEMSFHVPSTNTTFVGD 180
Query: 176 TDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
+ V A F D +++ A V A G+A+A F + LTPRGRY +++ SF +L G + D+
Sbjct: 181 EERVSAQVFCDKILSMADVGPAGGEAVAAFETVNVLTPRGRYLVELHLSFLRLFGAS-DF 239
Query: 234 KIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
KI ++V R+F LP + VI+LDPPI++GQT Y + + +E +E+ S++
Sbjct: 240 KIQYTSVARLFVLPRSAQSSTYVVITLDPPIRKGQTFYPHIVFQYPSEEITELTPLISDE 299
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGY 352
L KY+ +L + G +YEV +I++ + IT PG+ FR AV + KA G
Sbjct: 300 LLNTKYKDRLAPQYKGLSYEVFVEILRGLSGAGITKPGTKFRSSQEGYAVRAALKAEEGL 359
Query: 353 IYPLERGFIFIHKPPIHIRFEEIATVNFARSGG------STRSFDFEIELKSGVLHTFSS 406
+YPLE+ F F+ KPP I +EEI V F R G S+++FD + LK+ H F +
Sbjct: 360 LYPLEKSFFFLPKPPTLIVYEEIDYVEFERHGAAGTSSMSSKNFDLILRLKTDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEK-EPDAYLARVKRE----- 460
I + EY LF FI EK L++ N E SDDE +P R+ R
Sbjct: 420 ISRNEYHSLFKFISEKGLKILNFQTQGSSAVAEALQGSDDEGVDPHLERIRIARATGDEG 479
Query: 461 ---------AAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
A++DDE +D +E+ PD ++S E+ D P D
Sbjct: 480 DSDEEDEDFVADKDDEGSPTDDSGEEEE--PDASDSG-GEQQDERPVKKD---------- 526
Query: 512 TKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREK 571
KKK E S+K + +K K ++ KR+KKD NAPK+ +S +M + RE
Sbjct: 527 --KKKVEASQKP---AASKKKKKDEEGDGDKKKKRRKKDPNAPKRALSGFMYFSLAEREN 581
Query: 572 IKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY-KESGGGQDS 630
+KK PGISF ++AK GE WK +S EK ++ + KE Y + ++ Y K + GG +
Sbjct: 582 LKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGYNKGNAGGSTA 641
Query: 631 DD 632
DD
Sbjct: 642 DD 643
>gi|21314337|gb|AAM46895.1|AF503585_1 early drought induced protein [Oryza sativa Indica Group]
gi|218187645|gb|EEC70072.1| hypothetical protein OsI_00684 [Oryza sativa Indica Group]
Length = 641
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 352/651 (54%), Gaps = 35/651 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + R PG+ K+ + +K + GK +I DL V W K+ +
Sbjct: 1 MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF+E ++ + +F + N + EK+LSV G NWGG GN+L+
Sbjct: 61 QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + + +++M A V +++ +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRTAAQVLWETIMGVADV-DSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+++R+F LP + F V++LDPPI++GQT Y + + F + E L +
Sbjct: 240 DFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALT 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L EKY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 300 KEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSD-DEKEPDAYLARVKREAAERD 465
I++ EY LF+FI K L++ N G G+ D D+ D +L R+K +A +
Sbjct: 420 IQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDE- 478
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTIT 525
E + DEDF D+ +S +PT EDSDASE +K+K S+K +
Sbjct: 479 ------ESDEEDEDFVADKDDS-------GSPTDDSGGEDSDASESGGEKEK-LSKKEAS 524
Query: 526 ISEKPRKSK---KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
S+ P K K +D+E S +KKKD NAPK+ M+ +M + R +K +NP + T
Sbjct: 525 SSKPPVKRKPKGRDEEGSEKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTT 584
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
EIAKK GE+W+ ++ +EK Y ++ K+ Y + Y+ D D G
Sbjct: 585 EIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRYEKESAVYR-GAAAMDVDSG 634
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 347/662 (52%), Gaps = 49/662 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +A +F + RG PG+LKI+ + ++ GKV + D+ V+W ++ ++
Sbjct: 1 MGDAHQFNNILLGGRGGANPGQLKISSKGFSWRKSGGGKVVDVAKDDVKSVSWTRVSRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+ I LK GS +F GF+E ++ + +F +N + +K L+V G NWG + GN LS
Sbjct: 61 QMSIRLKAGSNVKFTGFREQDVSSLNTFITSNIGVTPQDKPLAVSGRNWGEAELEGNTLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAE--SLIEMRFYIPTNE--IAGD 175
F V AFEI + D+S GKN+V +EFH +D A E +L+EM F++P+ GD
Sbjct: 121 FVVGGKPAFEICVADISNTQVQGKNDVQMEFHVDDTANEKDTLMEMSFHVPSTNTTFVGD 180
Query: 176 TDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
+ A F D +++ A V A G+A+A F + LTPRGRY +++ SF +L G + D+
Sbjct: 181 EERASAQVFCDKILSMADVGPAGGEAVAAFETVNVLTPRGRYLVELHLSFLRLFGAS-DF 239
Query: 234 KIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
KI ++V R+F LP + VI+LDPPI++GQT Y + + +E +E+ S++
Sbjct: 240 KIQYTSVARLFVLPRSAQSSTYVVITLDPPIRKGQTFYPHIVFQYPSEEITELTPLISDE 299
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGY 352
L KY+ +L + G +YEV +I++ + IT PG+ FR AV + KA G
Sbjct: 300 LLNTKYKDRLAPQYKGLSYEVFVEILRGLSGAGITKPGTKFRSSQEGYAVRAALKAEEGL 359
Query: 353 IYPLERGFIFIHKPPIHIRFEEIATVNFARSGG------STRSFDFEIELKSGVLHTFSS 406
+YPLE+ F F+ KPP I +EEI V F R G S+++FD + LK+ H F +
Sbjct: 360 LYPLEKSFFFLPKPPTLIVYEEIDYVEFERHGAAGTSSMSSKNFDLILRLKTDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEK-EPDAYLARVKRE----- 460
I + EY LF FI EK L++ N E SDDE +P R+ R
Sbjct: 420 ISRNEYHSLFKFISEKGLKILNFQTQGSSAVAEALQGSDDEGVDPHLERIRIARATGDEG 479
Query: 461 ---------AAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
A++DDE +D +E+ PD ++S E+ D P D
Sbjct: 480 DSDEEDEDFVADKDDEGSPTDDSGEEEE--PDASDSG-GEQQDERPVKKD---------- 526
Query: 512 TKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREK 571
KKK E S+K +K + + D + KR+KKD NAPK+ +S +M + RE
Sbjct: 527 --KKKVEASQKPAATKKKKKDEEGDGDKK---KKRRKKDPNAPKRALSGFMYFSLAEREN 581
Query: 572 IKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY-KESGGGQDS 630
+KK PGISF ++AK GE WK +S EK ++ + KE Y + ++ Y K + GG +
Sbjct: 582 LKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGYNKGNAGGSTA 641
Query: 631 DD 632
DD
Sbjct: 642 DD 643
>gi|2495256|sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|433872|emb|CAA82251.1| HMG protein [Catharanthus roseus]
Length = 639
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 335/642 (52%), Gaps = 39/642 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + F ++ RG PG+L++ I++K + K +++ D+ + W K+ +
Sbjct: 1 MADGHLFNNITLGGRGGTNPGQLRVHSGGILWKKQGGAKAVEVDKSDMVGLTWMKVPRSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K+G ++F GF++ ++ + S+ ++ I EK+LSV G NWG GN+L+
Sbjct: 61 QLGVRIKDGLFYKFTGFRDQDVASLTSYLQSTCGITPEEKQLSVSGKNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFH----PNDEAAESLIEMRFYIPTN--EIA 173
F V + AFE+ L DV+Q GKN+V +EF SL+E+ F++P + +
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFMWMILLEQMRKNSLMEISFHVPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F+D +M+ A V DA+ F I LTPRGRY++++ SF +L G+
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + L F D + L S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSSLSIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E L KY+ KL+ G +EV I++ + K+T PG FR AV S KA G
Sbjct: 301 EDLLSTKYKDKLEPTYKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFSSIE 408
+YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F +I+
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE- 467
+ EY LFDFI K L++ N G + + DD+ D +L R+K EA + +
Sbjct: 421 RNEYHNLFDFISSKGLKIMNLGADKAADAITAVLQEDDDDAVDPHLERIKNEAGGDESDE 480
Query: 468 -------DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKS 520
D +DE TD+ + ESD SD ++ KK KKE S
Sbjct: 481 EDEDFVADIDDEGSPTDDS---GEGESD------------GSDSGNEEIPTKKKPKKEAS 525
Query: 521 RKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS 580
+ +S RK D ++ ++KKKD NAPK +SA+M + RE +KKDNPGI+
Sbjct: 526 APKVPLS---RKKVGDDDNMKKKKQKKKKDPNAPKS-ISAFMFFSQTERENVKKDNPGIA 581
Query: 581 FTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
FT++ K G+ ++K +++ K+ Y + + YK
Sbjct: 582 FTDVGKVLGDRCNKCQLRKKHLLKQRLVADKKRYTDEISNYK 623
>gi|115462441|ref|NP_001054820.1| Os05g0182600 [Oryza sativa Japonica Group]
gi|75253362|sp|Q65WY8.1|SSP1B_ORYSJ RecName: Full=FACT complex subunit SSRP1-B; AltName:
Full=Facilitates chromatin transcription complex subunit
SSRP1-B; AltName: Full=Recombination signal sequence
recognition protein 1-B
gi|52353744|gb|AAU44310.1| putative HMG-box with DNAbinding protein [Oryza sativa Japonica
Group]
gi|57900696|gb|AAW57821.1| putative HMG-box with DNAbinding protein [Oryza sativa Japonica
Group]
gi|113578371|dbj|BAF16734.1| Os05g0182600 [Oryza sativa Japonica Group]
gi|125551089|gb|EAY96798.1| hypothetical protein OsI_18726 [Oryza sativa Indica Group]
gi|222630432|gb|EEE62564.1| hypothetical protein OsJ_17363 [Oryza sativa Japonica Group]
Length = 640
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 361/658 (54%), Gaps = 41/658 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S RG PG+ K+ + +K + GK ++ D+ V W + ++
Sbjct: 1 MTDGHHFNNISLGGRGGNNPGQFKLYSGGLAWKRQGGGKTIEVEKSDITSVTWMAIPRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G +RF GF+E +I + +F + N +I EK+LSV G NWGG + GN+LS
Sbjct: 61 QLGVSTKEGLFYRFFGFREQDISSLTNFMEKNMRITPEEKQLSVGGHNWGGIEINGNMLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DV+Q GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFP 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + + +++N+A V ++ +A+ F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDENRPSAQVLWQAILNKADV-GSSEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S++LR+F LP + F VI+LDPPI++GQT Y + + F + + +L S
Sbjct: 240 DFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVQRDLTLS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L EKY+ +L+ G +EV +K+++ + K+T P +FR AV S KA G
Sbjct: 300 DEVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
I++ EY LF+FI K L++ N G +G S+DD+ D +L R++ +
Sbjct: 420 IQRNEYHNLFNFISGKHLKILNLGEAQGRAGGVTAVLQSTDDDA-VDPHLERIRNQ---- 474
Query: 465 DDEDDEDEDESTDEDFNPDQAESDVAEEYDS-NPTPTDSDEDSDASEGTKKKKKEKSRKT 523
T +D + ++ E VA++ DS +PT +E SDAS + +K++ S+K
Sbjct: 475 -----------TGDDESDEEDEDFVADKDDSGSPTDDSGEEGSDASL-SGGEKEKSSKKE 522
Query: 524 ITISEKPRKSKKDK-----ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG 578
+ S+ P K +K K E S +KKKD NAPK+ ++ +M + R +K NP
Sbjct: 523 ASSSKAPLKKRKPKGGDAAEGSEKRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPE 582
Query: 579 ISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
++ TEIAKK GE W+ ++++EK Y E+ K+ Y E AY+ D D G S
Sbjct: 583 LATTEIAKKLGERWQKMTAEEKQPYVEQSQVDKKRYAEESAAYR-GAAAMDVDSGPAS 639
>gi|168047021|ref|XP_001775970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672628|gb|EDQ59162.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 221/643 (34%), Positives = 344/643 (53%), Gaps = 35/643 (5%)
Query: 6 EFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIF 65
+F + RG PG+LKI ++ GKV +++ D+ ++W ++ + L +
Sbjct: 2 QFNSILLGGRGGTNPGQLKINSGGFQWRKAGGGKVVEVSTSDIASLSWTRVPKGFQLGVK 61
Query: 66 LKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNN 125
LK G +F GF+E+++ + SFF TN I EK L++ G NWG G+ L+F V
Sbjct: 62 LKAGRDVKFNGFRESDMANLGSFFTTNMGITSEEKPLAISGRNWGDVTLEGSSLAFSVGG 121
Query: 126 TTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAES----LIEMRFYIPTNEIA--GDTD- 177
AF++ + DVSQ GKNEV +EFH +D S L+E+ F+IPT GD +
Sbjct: 122 KHAFDVSIADVSQTQMQGKNEVMLEFHVDDTTGASEKDTLMELSFHIPTTNTTYIGDEER 181
Query: 178 -PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIP 236
P + F++ +++ V + +AIA+F E+ LTPRGRY++++ SF +L G+ D+KI
Sbjct: 182 PPAQIFREKILSMGDVGPSGAEAIALFEEVHILTPRGRYNVELHASFLRLQGQANDFKIQ 241
Query: 237 ISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
S+V+R+F LP + F VI+LDPPI++GQT Y + L F +E +E L E+ L
Sbjct: 242 YSSVVRLFILPKSNQPHTFVVITLDPPIRKGQTFYPHIVLQFPSEEIAECTLSIGEELLN 301
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPL 356
KY+ +L +++V +I+K + K+T PG FR V S KA G +YPL
Sbjct: 302 TKYKDRLQPAYKDLSHDVFTQILKGLSGAKVTRPGKFRSAQDGYCVRTSLKAEEGTLYPL 361
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFARSGG------STRSFDFEIELKSGVLHTFSSIEKE 410
E+ F F+ KPP I +EI + F R G S+ FD I LKS H F +I++
Sbjct: 362 EKSFFFLPKPPTLILHDEIEYLEFERHGAAGTSSISSHYFDLLIRLKSEQEHQFRNIQRN 421
Query: 411 EYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDE 470
EY LF+FI K L++ N G + + D++ D +L R++ +
Sbjct: 422 EYHNLFNFISGKNLKIMNLGDAQGTSGVAAALEGSDDEGVDPHLNRIRSARESGGAGLGD 481
Query: 471 DEDESTDEDFNPDQAESDVAEEYDS-NPTPTDSDEDSDASE--GTKKKKKEKSRKTITIS 527
++ + DEDF VAE+ D+ +PT E+ D S+ G + KKK + R+ +
Sbjct: 482 EDSDEEDEDF--------VAEKDDAGSPTDESDGEEPDGSDDGGERPKKKREKREDVAPK 533
Query: 528 EKPRKSKKDKES-----SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG---I 579
P+K KK E+ K+K+KD NAPK+ +SA+M + + R+K+K D PG +
Sbjct: 534 SAPKKRKKKDEADGEDGGKKKRKKKEKDPNAPKRALSAFMRFQLEERKKMKAD-PGQASM 592
Query: 580 SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
SF E K GE W+ +S+ +KA Y+ +E Y +A+ YK
Sbjct: 593 SFGEFGKSLGEKWRNMSASDKAPYEADAKVDQERYKKAMAGYK 635
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 340/635 (53%), Gaps = 18/635 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S RG PG LKI I +K + GK +++ D+ ++W K+ T
Sbjct: 1 MTDGHNFNNISLSGRGGTNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVGLSWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF++ ++ + SFF++ F EK+LSV G N+G F GN L+
Sbjct: 61 QLGVNTKDGIYYKFIGFRDQDVTSLTSFFQSTFGKTPVEKQLSVSGRNFGEVHFNGNSLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V AFE+ L DVSQ GK +V +EFH +D A +SL+E+ F++P + +
Sbjct: 121 FSVGAKQAFEVSLADVSQTQLQGKTDVLLEFHVDDTAGANEKDSLMEISFHVPNSNTQFV 180
Query: 174 GDTDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + A D + A V +A+A F+ I LTPRGRY++++ SF +L+G+
Sbjct: 181 GDENRTSAQVLCDEIKVVADVGAGFEEAVATFDGIAILTPRGRYNVELHLSFLRLNGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F VISLDPPI++GQT Y + + F D E EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDSVVESELSIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
+ + K++ KL++ G +EV +++ + KIT PG FR AV S KA G
Sbjct: 301 DDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSAQDGFAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIE 408
+YPLE+GF F+ KPP I +EI V F R G + FD I LKS H F +I+
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIEYVEFERHAAGGANMHYFDLLIRLKSDHEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE 467
+ EY L+ FI K L++ N G G +DD+ D +L R++ +AA+ DE
Sbjct: 421 RNEYHNLYSFISGKGLKIMNLGGAGTTDGVAAVLRDNDDDDAVDPHLERIRNQAADESDE 480
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITIS 527
+DED D+D S E + + +D K+ K+E S + +
Sbjct: 481 EDEDFVMGEDDD-----GGSPTDESGEDDSDGSDGGGGEKEKSIKKEPKREASSSSKGLP 535
Query: 528 EKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKK 587
K + ++ SS ++KKKD NAPK+ MS +M + R+ IKK +PGI+F E+ K
Sbjct: 536 PKKKALVTEEGSSKKRKQKKKKDPNAPKRAMSGFMFFSQMERDNIKKTHPGIAFGEVGKV 595
Query: 588 GGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
G+ W+ +S++EK Y+ K K+ Y + + YK
Sbjct: 596 LGDKWRQMSAEEKEPYEAKAQVDKKRYKDEISDYK 630
>gi|162462425|ref|NP_001105124.1| FACT complex subunit SSRP1 [Zea mays]
gi|75263808|sp|Q9LEF5.1|SSRP1_MAIZE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Zm-SSRP1
gi|8920409|emb|CAB96421.1| SSRP1 protein [Zea mays]
Length = 639
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 345/641 (53%), Gaps = 35/641 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + RG PG+ K+ + +K + GK +I+ D+ V W K+ +
Sbjct: 1 MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K G +RF GF+E ++ + +F + N + EK+LSV G NWGG GN+L+
Sbjct: 61 QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DV+Q GK +V +E H +D +SL+++ F++PT+ +
Sbjct: 121 FMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD P ++++ A V ++ + + F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDESRPPAHILWETILKFADV-GSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+++R+F LP + F VI+LDPPI++GQT Y + + F + E +L S
Sbjct: 240 DFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L EKY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 300 KELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
I++ EY LF+FI K +++ N G+G + +DD+ D +L R+K +A +
Sbjct: 420 IQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDA-VDPHLERIKNQAGD 478
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE--GTKKKKKEKSR 521
E + DEDF D+ +S +PT DE+SDAS+ G K+K +K
Sbjct: 479 E-------ESDEEDEDFVADKDDS-------GSPTDDSGDEESDASDSGGEKEKSSKKEA 524
Query: 522 KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
+ +K + +D E +KKKD NAPK+ M+ +M + R +K NP +
Sbjct: 525 SSSKPVQKRKHKARDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPT 584
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
TEIAKK GE+W+ +S +EK Y ++ K+ Y + Y+
Sbjct: 585 TEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYR 625
>gi|224077702|ref|XP_002305370.1| high mobility group family [Populus trichocarpa]
gi|222848334|gb|EEE85881.1| high mobility group family [Populus trichocarpa]
Length = 644
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 343/646 (53%), Gaps = 43/646 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + RG PG LKI+ I++K + GK +++ D+ V W K+ T
Sbjct: 1 MTDGHLFNNIFLGGRGGTNPGHLKISPGGILWKKQGGGKAVEVDRADILGVTWMKVPRTN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K G ++F GF++ ++ + +FF+++ I EK+LSV G NWG GN+L+
Sbjct: 61 QLSVLIKGGPWYKFTGFRDQDLSTLTNFFQSH-GITPEEKQLSVSGRNWGEVDLNGNMLT 119
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDE-------AAESLIEMRFYIPTN-- 170
F V + AFE+ L DVSQ GKN+V +E +SL+E+ F+IP N
Sbjct: 120 FLVGSKQAFEVSLADVSQTQMQGKNDVILEIDAIISNYILLCLQKDSLMELSFHIPNNNT 179
Query: 171 EIAGDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
+ GD + P + F+D ++ +A V +A+ F I LTPRGRY +++ SF +L G
Sbjct: 180 QYIGDENHPPAQVFRDLIVQKADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 239
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
+ D+KI S+V+R+F LP + F V++LDPPI++GQT Y + L F+ D + L
Sbjct: 240 QANDFKIQYSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVLQFDTDFVVQSNL 299
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
SE L KY+ KL+ G +EV I++ + + K+T PG FR AV S KA
Sbjct: 300 SMSEDLLYTKYKDKLEPSYKGLIHEVFTTILRGLSSAKVTRPGKFRSCQDGYAVKSSLKA 359
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGS-TRSFDFEIELKSGVLHTFS 405
G +YPLE+ F F+ KPP I EEI V F R +GGS FD I LK+ H F
Sbjct: 360 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 419
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD 465
+I++ EY LFDFI K +++ N G + +DD+ D +LAR++ EA + +
Sbjct: 420 NIQRNEYHNLFDFISGKGMKIMNLGDMQTAKGVAAVLQNDDDDAVDPHLARIRNEAGDDE 479
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE--------GTKKKKK 517
++++++ +D +PT +E+SDASE G K K+
Sbjct: 480 SDEEDEDFVLGKDD--------------GGSPTDDSGEEESDASESGDEKENPGKKDFKR 525
Query: 518 E-KSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDN 576
E S K +T RKS+ +ES +KKKD NAPK+ SAY+ + RE +KK N
Sbjct: 526 EVSSSKAVT----KRKSRDGEESQKKRKPKKKKDPNAPKRSKSAYVFFSQMERENVKKSN 581
Query: 577 PGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
PGI F EI K + W +S++EK Y+E K+ Y + YK
Sbjct: 582 PGIVFGEITKALADKWNAMSAEEKEPYEEMARDDKQRYKSQVNDYK 627
>gi|170074950|ref|XP_001870639.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
gi|167872009|gb|EDS35392.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
Length = 423
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/352 (59%), Positives = 257/352 (73%), Gaps = 12/352 (3%)
Query: 319 MKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATV 378
MKVI NRK+T PG+F GH+GT AV CSYKAAAGYIYPLERGFI++HKPP+HIRFEEIA+V
Sbjct: 1 MKVINNRKLTGPGTFIGHSGTPAVGCSYKAAAGYIYPLERGFIYVHKPPVHIRFEEIASV 60
Query: 379 NFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYK 438
NFARSGGSTRSFDFEIELK+G ++TFSSIEKEEYGKLFDFI KKL VKNTGK K YK
Sbjct: 61 NFARSGGSTRSFDFEIELKTGTIYTFSSIEKEEYGKLFDFISSKKLHVKNTGKDGKNAYK 120
Query: 439 EDFGSSDDEKEPDAYLARVKREAAER--DDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
EDF SD+E EPDAYLARVK EA ER D +DD+D +ESTDEDFNP+QAESDVAEE+DSN
Sbjct: 121 EDFADSDNENEPDAYLARVKAEAKERDDDGDDDDDSEESTDEDFNPNQAESDVAEEFDSN 180
Query: 497 PTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKK 556
+S + D+ G ++++K + +K +K KK + K KK PK+
Sbjct: 181 ---VESSSEEDSEGGGGGGSDDEAKKKLKEKKKEKKEKKKERKERKEKKPKKSKSGGPKR 237
Query: 557 PMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNE 616
P +A+M+W N RE+IKK+NPGIS TEIAKKGGE+WK + K+K+E++ K KAKE+Y E
Sbjct: 238 PSTAFMLWLNATRERIKKENPGISVTEIAKKGGEMWKEL--KDKSEWEGKAAKAKEEYVE 295
Query: 617 ALKAYKESGGGQDSD-----DGKTSKSKKPAKKKETASTAVSPHKVKSKEFI 663
A+K YK +GGG D GK KS+ KK + A+ KSKE+I
Sbjct: 296 AMKEYKAAGGGGSGDEGGKASGKKRKSEGSPKKTVSTGAAMKGSGFKSKEYI 347
>gi|224030253|gb|ACN34202.1| unknown [Zea mays]
gi|413947660|gb|AFW80309.1| FACT complex subunit SSRP1 [Zea mays]
Length = 639
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 345/641 (53%), Gaps = 35/641 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + RG PG+ K+ + +K + GK +I+ D+ V W K+ +
Sbjct: 1 MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K G +RF GF+E ++ + +F + N + EK+LSV G NWGG GN+L+
Sbjct: 61 QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DV+Q GK +V +E H +D +SL+++ F++PT+ +
Sbjct: 121 FMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD P ++++ A V ++ + + F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDESRPPAHILWETILKFADV-GSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+++R+F LP + F VI+LDPPI++GQT Y + + F + E +L S
Sbjct: 240 DFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ L EKY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 300 KELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
I++ EY LF+FI K +++ N G+G + +DD+ D +L R+K +A +
Sbjct: 420 IQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDA-VDPHLERIKNQAGD 478
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE--GTKKKKKEKSR 521
E + DEDF D+ +S +PT DE+SDAS+ G K+K +K
Sbjct: 479 E-------ESDEEDEDFVADKDDS-------GSPTDDSGDEESDASDSGGEKEKSSKKEA 524
Query: 522 KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
+ +K + +D E +KKKD NAPK+ M+ +M + R +K NP +
Sbjct: 525 SSSKPVQKRKHKGRDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPT 584
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
TEIAKK GE+W+ +S +EK Y ++ K+ Y + Y+
Sbjct: 585 TEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYR 625
>gi|384247648|gb|EIE21134.1| SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 659
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 221/647 (34%), Positives = 335/647 (51%), Gaps = 47/647 (7%)
Query: 2 TEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWA 61
T + ++ + R G LK++ + +K GK +I D++ W K
Sbjct: 5 TGSHQYGNIILAHRSGTSTGNLKVSSSGLTWKKAGAGKTVEIQQGDIEGFVWSKTSRGCQ 64
Query: 62 LRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSF 121
L + +G + +F GF + ++ + K ++ E+ LS+ G NWGG L F
Sbjct: 65 LAVKKSSGPMVQFLGFIDKDLTALRGVASVMNK-EIEEQALSISGRNWGGATVEEGTLVF 123
Query: 122 DVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAA----ESLIEMRFYIPTNEIA---- 173
V N AF IPLRDV Q G+ EVT+EF +D A ++L +M FY+P
Sbjct: 124 RVGNKPAFRIPLRDVGQVQLGREEVTLEFPVDDTAGGDNEDALTDMVFYVPREATGFVED 183
Query: 174 GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
G+ + D V+ AT DA+ F+ + L PRGR+D++++ SF +L G+ D+
Sbjct: 184 GEDQAAKVMYDQVLEHTDAGVATEDAVVTFDSLAVLIPRGRFDVELYPSFMKLLGQAQDF 243
Query: 234 KIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
+I ++LR+F LP + V+SLDPPI++GQT Y+ + + F DE ++EL S++
Sbjct: 244 RIQYDSILRLFVLPKTNTPHTLVVVSLDPPIRKGQTHYYHILVQFPSDEERQIELELSDE 303
Query: 294 EL---KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFR-GHTGTSAVTCSYKAA 349
L EK GKL K L GP Y+V AK ++ + K+T PG+FR AV CSYKA
Sbjct: 304 ALAAKNEKCGGKLQKTLEGPAYDVFAKALRGLSGCKLTKPGTFRTADEAGFAVRCSYKAD 363
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSG--VLH 402
GY+YPLER F +IHKPP + +EI ++ F R GG S ++FD I +K+ +
Sbjct: 364 DGYLYPLERAFFYIHKPPTLLVHDEIESIEFMRQGGGVLAASAKTFDLNIRMKTDNKPEY 423
Query: 403 TFSSIEKEEYGKLFDFIREKKLRVKN--------TGKGEKPNYKEDFGSSDDEKEPDAYL 454
F I+K E+ LF FI+ K+LR++N G G + +D D L
Sbjct: 424 LFRGIQKSEWQNLFSFIQAKRLRIENLREAELGPAGGGTALDLGDDI---------DTGL 474
Query: 455 ARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKK 514
A+++ D D+D D DF+ A+S E+ D + D DE+++ + K
Sbjct: 475 AQMEAHG-------DLDDDSEEDADFDAG-ADSGAGEDDDDSGMSDDEDEETETKKKVAK 526
Query: 515 KKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKK 574
K K+ K RK K+ K+ KKD NAPKK +SA+M + + R+++KK
Sbjct: 527 APKAKAEPKPKAEPKKRKPAPAKKDD--KKKKAKKDPNAPKKALSAFMFFSSAKRDEVKK 584
Query: 575 DNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
+NP ISF E+ K G+ WK +S+ EKA+YDE K K Y +A +AY
Sbjct: 585 ENPDISFGEVGKALGDKWKNISATEKAKYDEMAKKDKVRYAKAKEAY 631
>gi|363543425|ref|NP_001241722.1| structure-specific recognition protein 1 [Zea mays]
gi|195604724|gb|ACG24192.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 218/653 (33%), Positives = 346/653 (52%), Gaps = 47/653 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + RG PG+ K+ + +K + GK +I+ D+ V W K+ +
Sbjct: 1 MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF------ 114
L + +K G +RF GF+E ++ + +F + N + EK+LSV G NWGG
Sbjct: 61 QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGLTSM 120
Query: 115 ------IGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEM 163
+GN+L+F V + AFE+ L DV+Q GK +V +E H +D +SL+++
Sbjct: 121 FVTLASVGNMLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDL 180
Query: 164 RFYIPTN--EIAGDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
F++PT+ + GD P ++++ A V ++ + + F I LTPRGRY +++
Sbjct: 181 SFHVPTSNTQFVGDESRPPAHILWETILKFADV-GSSEEPVVTFEGIAILTPRGRYSVEL 239
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
SF +L G+ D+KI S+++R+F LP + F VI+LDPPI++GQT Y + + F
Sbjct: 240 HLSFLRLQGQANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFE 299
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
+ E +L S++ L EKY+ +L++ G +EV K+++ + K+T PGSFR
Sbjct: 300 TEAVVERDLALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDG 359
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEI 394
AV S KA G +YPLE+GF F+ KPP I EEI V F R G S+ FD +
Sbjct: 360 YAVKSSLKAEDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLV 419
Query: 395 ELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPD 451
+LK+ H F +I++ EY LF+FI K +++ N G+G + +DD+ D
Sbjct: 420 KLKNDQEHLFRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDA-VD 478
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE- 510
+L R+K +A + E + DEDF D+ +S +PT DE+SDAS+
Sbjct: 479 PHLERIKNQAGDE-------ESDEEDEDFVADKDDS-------GSPTDDSGDEESDASDS 524
Query: 511 -GTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMR 569
G K+K +K + +K + +D E +KKKD NAPK+ M+ +M + R
Sbjct: 525 GGEKEKSSKKEASSSKPVQKRKHKARDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAER 584
Query: 570 EKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+K NP + TEIAKK GE+W+ +S +EK Y ++ K+ Y + Y+
Sbjct: 585 GNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYR 637
>gi|357134382|ref|XP_003568796.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 1
[Brachypodium distachyon]
Length = 643
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 350/651 (53%), Gaps = 37/651 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S R PG+ K+ + +K + GK +++ D+ + W K+ ++
Sbjct: 1 MTDGHLFNNISLGGRVGNNPGQFKLHSGGLAWKKQGGGKTIEVDKADIISMTWMKIPRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G + F GF+E ++ + +F + + + EK+LSV G NWGG + GN+LS
Sbjct: 61 QLSVGTKEGIRYMFKGFREQDVSNLANFIQKSTGVAPEEKQLSVSGHNWGGVEITGNMLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DVSQ GK +V +EFH +D +SL+++ F+IPT +
Sbjct: 121 FNVGSKEAFEVSLADVSQTQMQGKTDVVLEFHVDDTTGANEKDSLMDISFHIPTTNTQFP 180
Query: 174 GDTDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD D A F ++ A V ++ +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDEDRPSAHIFWQKILAIADV-GSSEEAVVTFEGIAILTPRGRYSVELHMSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S++LR+F LP + F VI+LDPPI++GQT Y + + F + +EM+L S
Sbjct: 240 DFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFQTEVVAEMDLKLS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E+ L EKY+ +L +G +EV +KI++ + K+T P +FR AV S KA G
Sbjct: 300 EEVLAEKYKDRLQGSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
I++ EY LFDF+ K L++ N G+G S+DD D +L R+K +A +
Sbjct: 420 IQRNEYHNLFDFVSGKNLKIMNLGEDGQGRTGAVAAALDSTDDSLH-DPHLERIKNQAGD 478
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKT 523
+ + ++ E VA++ DS DSDE SDAS + +K ++
Sbjct: 479 EESD---------------EEDEDFVADKDDSGSPSDDSDEGSDASLSGGESEKSSKKEA 523
Query: 524 ITISEKPRKSKKDKESSGG---STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS 580
+ ++ K ++ G K+KKKD NAPK+ ++ +M + R +K NP +
Sbjct: 524 SSSKPPVKRKPKSGDTEGSEKRKPKKKKKDPNAPKRALAPFMYFSKAERANLKSSNPVLG 583
Query: 581 FTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD 631
T+IAKK GE W+ +S++EK Y E+ K+ Y E AY+++ G D
Sbjct: 584 TTDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGAAPVD 634
>gi|413947661|gb|AFW80310.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 218/653 (33%), Positives = 346/653 (52%), Gaps = 47/653 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F + RG PG+ K+ + +K + GK +I+ D+ V W K+ +
Sbjct: 1 MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF------ 114
L + +K G +RF GF+E ++ + +F + N + EK+LSV G NWGG
Sbjct: 61 QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGLTSM 120
Query: 115 ------IGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEM 163
+GN+L+F V + AFE+ L DV+Q GK +V +E H +D +SL+++
Sbjct: 121 FVTLASVGNMLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDL 180
Query: 164 RFYIPTN--EIAGDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
F++PT+ + GD P ++++ A V ++ + + F I LTPRGRY +++
Sbjct: 181 SFHVPTSNTQFVGDESRPPAHILWETILKFADV-GSSEEPVVTFEGIAILTPRGRYSVEL 239
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
SF +L G+ D+KI S+++R+F LP + F VI+LDPPI++GQT Y + + F
Sbjct: 240 HLSFLRLQGQANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFE 299
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
+ E +L S++ L EKY+ +L++ G +EV K+++ + K+T PGSFR
Sbjct: 300 TEAVVERDLALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDG 359
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEI 394
AV S KA G +YPLE+GF F+ KPP I EEI V F R G S+ FD +
Sbjct: 360 YAVKSSLKAEDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLV 419
Query: 395 ELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPD 451
+LK+ H F +I++ EY LF+FI K +++ N G+G + +DD+ D
Sbjct: 420 KLKNDQEHLFRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDA-VD 478
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE- 510
+L R+K +A + E + DEDF D+ +S +PT DE+SDAS+
Sbjct: 479 PHLERIKNQAGDE-------ESDEEDEDFVADKDDS-------GSPTDDSGDEESDASDS 524
Query: 511 -GTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMR 569
G K+K +K + +K + +D E +KKKD NAPK+ M+ +M + R
Sbjct: 525 GGEKEKSSKKEASSSKPVQKRKHKGRDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAER 584
Query: 570 EKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+K NP + TEIAKK GE+W+ +S +EK Y ++ K+ Y + Y+
Sbjct: 585 GNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYR 637
>gi|326523557|dbj|BAJ92949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 643
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 222/658 (33%), Positives = 349/658 (53%), Gaps = 39/658 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S R PG+ ++ + +K + GK +++ D+ V W K+ ++
Sbjct: 1 MTDGHLFNNISLGGRVGNNPGQFRLYSGGLAWKKQGGGKTIEVDKADIVSVTWMKIPRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G + F GF+E ++ + +F + N EK+LSV G NWG GN+LS
Sbjct: 61 QLSVGTKEGIRYVFKGFREQDVSNLTNFIQKNTGTTPEEKQLSVSGHNWGAVDINGNMLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DVSQ GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FNVGSKEAFEVSLSDVSQTQLQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFL 180
Query: 174 GDTDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + A F ++ A V ++ +A+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDEERPSAHIFWQKILTIADV-GSSEEAVVSLEGIAILTPRGRYTVELHMSFLRLQGQAN 239
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S++LR+F LP + F VI+LDPPI++GQT Y + + F + E EL S
Sbjct: 240 DFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFVTENVVEKELSLS 299
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E+ L EKY+ +L +G +EV +KI++ + K+T P +FR AV S KA G
Sbjct: 300 EEVLAEKYKDRLQSSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDG 359
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R G S+ FD ++LK+ H F +
Sbjct: 360 LLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHLFRN 419
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGK--GEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
I++ EY LF+F+ K L++ N G+ ++ S D+ D +L R+K +A +
Sbjct: 420 IQRNEYHNLFNFVSGKNLKILNLGEDGQDRTGAVAAALQSTDDDPVDPHLERIKNQAGDE 479
Query: 465 DDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDAS--EGTKKKKKEKSRK 522
+ ++ + E VA++ DS DS+E SDAS +G K+K +K
Sbjct: 480 ESDE---------------EDEDFVADKDDSGSPSDDSEEGSDASISDGEKEKSSKKEAS 524
Query: 523 TIT--ISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS 580
+ + KP+ + K+K KD NAPK+ ++ +M + R +K NP +S
Sbjct: 525 SSKPPVKRKPKSVDVESSEKRKPKKKKTKDPNAPKRAIAPFMYFSKAERANLKNINPELS 584
Query: 581 FTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ---DSDDGKT 635
T+IAKK GE W+ +S++EK Y E+ K+ Y E AY+ +G DS DG +
Sbjct: 585 TTDIAKKLGEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAAPVDVDSADGSS 642
>gi|413944648|gb|AFW77297.1| hypothetical protein ZEAMMB73_043348 [Zea mays]
Length = 644
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 221/669 (33%), Positives = 344/669 (51%), Gaps = 63/669 (9%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +A F +S RG PG+ K+ + +K + GK+ +++ D+ V W ++ ++
Sbjct: 1 MADAHHFNNISLGGRGGGHPGQFKLYSGGLAWKKQGGGKIIEVDKGDITNVAWMRIPKSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G +RF GF+E ++ + +F + + I EK+LSV G NWGG + GN+L
Sbjct: 61 QLSVGTKEGLCYRFFGFREQDVSNLTNFIEKSTGITPEEKQLSVSGQNWGGIQINGNMLC 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DV+Q GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFI 180
Query: 174 GDTDPVEAFKDSVMNQASVINATGD-----AIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
GD A ++ QA + G A+ F+ I LTPRGRY +++ SF +L G
Sbjct: 181 GDEHRTSA---QMLWQAISVEIDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQG 237
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
+ D+KI S++LR+F LP F VI+LDPPI++GQT Y + + F + E EL
Sbjct: 238 QANDFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVEREL 297
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
S + L EKY+ +L+ G +EV +K+++ + + K+T P +FR AV S KA
Sbjct: 298 TLSGEILAEKYKDRLESSYRGLIHEVFSKVLRGLSSAKVTRPSTFRSCLDGYAVKSSLKA 357
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHT 403
G +YPLE+GF F+ KPP I EEI V F R G S+ FD ++L +
Sbjct: 358 EDGLLYPLEKGFFFLPKPPTLIPHEEIEYVEFERHGAGGASISSHYFDLLVKLTNDQELL 417
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKNTGKGE-KPNYKEDFGSSDDEKEPDAYLARVKREAA 462
F +I++ EY LF+FI K L++ N G G+ + + S D+ D +L R+K +A
Sbjct: 418 FRNIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAG 477
Query: 463 ERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK 522
E + DEDF D+ D + +PTD DSDA EG+ ++
Sbjct: 478 NE-------ESDEEDEDFVADK---------DDSGSPTD---DSDA-EGSDASMSGGEKE 517
Query: 523 TITISEKPRKSKKDKESSGGSTKRKKKDKNAP------------------KKPMSAYMMW 564
+KP K KE+S KKK K+ P K+ ++ +M +
Sbjct: 518 VTNFFQKPSK----KEASSSKPPVKKKQKSGPDEGSQKKKPKKKKDPNAPKRAIAPFMYF 573
Query: 565 FNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
R IK NP ++ TEIAKK GE W+ ++++E+ Y E+ K+ Y E AY+ +
Sbjct: 574 SKAERANIKSSNPELATTEIAKKLGERWQKMTAEERQPYVEQSQVDKQRYAEESAAYRGA 633
Query: 625 GGGQDSDDG 633
Q S G
Sbjct: 634 AAQQGSGAG 642
>gi|242087123|ref|XP_002439394.1| hypothetical protein SORBIDRAFT_09g005650 [Sorghum bicolor]
gi|241944679|gb|EES17824.1| hypothetical protein SORBIDRAFT_09g005650 [Sorghum bicolor]
Length = 644
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 344/651 (52%), Gaps = 27/651 (4%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + F +S RG PG+ K+ + +K + GK+ +++ D+ V W ++ ++
Sbjct: 1 MADGHHFNNISLGGRGGGNPGQFKLYSGGLAWKKQGGGKIIEVDKGDITSVAWMRIPKSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G +RF GF+E ++ + +F + + I EK+LSV G NWGG + G++L
Sbjct: 61 QLSVGTKEGLCYRFFGFREQDVSSLTNFIEKSTGITPEEKQLSVTGHNWGGIEINGSMLC 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DV+Q GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180
Query: 174 GDTDPVEAFKDSVMNQASVINATGD-----AIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
GD A ++ QA + G A+ F+ I LTPRGRY +++ SF +L G
Sbjct: 181 GDEHRTSA---QMLWQAISVEIDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQG 237
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
+ D+KI S++LR+F LP F VI+LDPPI++GQT Y + + F + E EL
Sbjct: 238 QANDFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVEREL 297
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
S + L EKY+ +L+ G +EV +K+++ + K+T P +FR AV S KA
Sbjct: 298 ALSGEVLAEKYKDRLESSYRGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 357
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHT 403
G +YPLE+GF F+ KPP I +EI V F R G S+ FD ++L + H
Sbjct: 358 EDGLLYPLEKGFFFLPKPPTLIPHDEIEYVEFERHGAGGASISSHYFDLLVKLTNDQEHL 417
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKNTGKGE-KPNYKEDFGSSDDEKEPDAYLARVKREAA 462
F +I++ EY LF+FI K L++ N G G+ + + S D+ D +L R+K +A
Sbjct: 418 FRNIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAG 477
Query: 463 ERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK 522
+ ++++++ + +D + S + + S D + + +++
Sbjct: 478 NDESDEEDEDFVADKDD-----SGSPTDDSDADGSDASMSGGDKEKPSKKEASSSKEASS 532
Query: 523 TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
+ +K +KS D E S +KKKD NAPK+ ++ +M + R IK NP ++ T
Sbjct: 533 SKPPVKKKQKSGPD-EGSQKKRPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPELATT 591
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
EIAKK GE W+ ++++E+ Y E+ K+ Y E AY+ + Q S G
Sbjct: 592 EIAKKLGERWQKMTAEERQPYVEQSQVDKQRYAEESAAYRGAAAQQGSGAG 642
>gi|324501567|gb|ADY40695.1| FACT complex subunit SSRP1-A [Ascaris suum]
Length = 478
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/316 (48%), Positives = 216/316 (68%), Gaps = 2/316 (0%)
Query: 1 MTEA-LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGT 59
M +A LE+ +V E G L G++K+ DQ+I FKN KTGK++ I +++ ++W +L
Sbjct: 161 MVDAFLEYSDVVHEDMGFLNSGRIKLADQHIQFKNTKTGKLQTIGTSEIEKISWMRLANK 220
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVL 119
L+ L +G RF GF E E +KI +F N+ DV + + S++GWN+G + G VL
Sbjct: 221 PGLKFSLTSGISLRFGGFSEKEYEKIKAFANRNWNKDVVQVDQSIKGWNYGKAEVKGQVL 280
Query: 120 SFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDP- 178
F+V+ FEIPL +VS CT+GK+E +EFH ND+ A SL+EMRF+IPT+ A +
Sbjct: 281 EFEVDEKPCFEIPLSNVSNCTSGKSEAVLEFHQNDDCAVSLMEMRFHIPTDPDADEDADP 340
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
VE F+ +VM A + T +A +I C TPRGRYDIK++ + LHGKT+DYKIPI
Sbjct: 341 VEEFRRAVMQYAGIETETDQPVATLQQILCTTPRGRYDIKVYQNHLSLHGKTYDYKIPIK 400
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
T++R+F LPHKDGR +FVISL+PPI+QGQTRYHFL L F +DE E++L ++++LKE+
Sbjct: 401 TIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFAKDEEVELDLGLTQEQLKEQ 460
Query: 299 YEGKLDKELSGPTYEV 314
Y+GKLDK+LSG +EV
Sbjct: 461 YKGKLDKKLSGNVFEV 476
>gi|357134384|ref|XP_003568797.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 2
[Brachypodium distachyon]
Length = 655
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 350/663 (52%), Gaps = 49/663 (7%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
MT+ F +S R PG+ K+ + +K + GK +++ D+ + W K+ ++
Sbjct: 1 MTDGHLFNNISLGGRVGNNPGQFKLHSGGLAWKKQGGGKTIEVDKADIISMTWMKIPRSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG---- 116
L + K G + F GF+E ++ + +F + + + EK+LSV G NWGG + G
Sbjct: 61 QLSVGTKEGIRYMFKGFREQDVSNLANFIQKSTGVAPEEKQLSVSGHNWGGVEITGLLTM 120
Query: 117 --------NVLSFDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEM 163
N+LSF+V + AFE+ L DVSQ GK +V +EFH +D +SL+++
Sbjct: 121 FGFLPISGNMLSFNVGSKEAFEVSLADVSQTQMQGKTDVVLEFHVDDTTGANEKDSLMDI 180
Query: 164 RFYIPTN--EIAGDTDPVEA--FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
F+IPT + GD D A F ++ A V ++ +A+ F I LTPRGRY +++
Sbjct: 181 SFHIPTTNTQFPGDEDRPSAHIFWQKILAIADV-GSSEEAVVTFEGIAILTPRGRYSVEL 239
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
SF +L G+ D+KI S++LR+F LP + F VI+LDPPI++GQT Y + + F
Sbjct: 240 HMSFLRLQGQANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFQ 299
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
+ +EM+L SE+ L EKY+ +L +G +EV +KI++ + K+T P +FR
Sbjct: 300 TEVVAEMDLKLSEEVLAEKYKDRLQGSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDG 359
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEI 394
AV S KA G +YPLE+GF F+ KPP I EEI V F R G S+ FD +
Sbjct: 360 YAVKSSLKAEDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLV 419
Query: 395 ELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNT---GKGEKPNYKEDFGSSDDEKEPD 451
+LK+ H F +I++ EY LFDF+ K L++ N G+G S+DD D
Sbjct: 420 KLKNDQEHLFRNIQRNEYHNLFDFVSGKNLKIMNLGEDGQGRTGAVAAALDSTDDSLH-D 478
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
+L R+K +A + + + ++ E VA++ DS DSDE SDAS
Sbjct: 479 PHLERIKNQAGDEESD---------------EEDEDFVADKDDSGSPSDDSDEGSDASLS 523
Query: 512 TKKKKKEKSRKTITISEKPRKSKKDKESSGG---STKRKKKDKNAPKKPMSAYMMWFNDM 568
+ +K ++ + ++ K ++ G K+KKKD NAPK+ ++ +M +
Sbjct: 524 GGESEKSSKKEASSSKPPVKRKPKSGDTEGSEKRKPKKKKKDPNAPKRALAPFMYFSKAE 583
Query: 569 REKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ 628
R +K NP + T+IAKK GE W+ +S++EK Y E+ K+ Y E AY+++ G
Sbjct: 584 RANLKSSNPVLGTTDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGAA 643
Query: 629 DSD 631
D
Sbjct: 644 PVD 646
>gi|19113107|ref|NP_596315.1| FACT complex component Pob3 [Schizosaccharomyces pombe 972h-]
gi|74582917|sp|O94529.1|POB3_SCHPO RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|4160575|emb|CAA22834.1| FACT complex component Pob3 [Schizosaccharomyces pombe]
Length = 512
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 280/512 (54%), Gaps = 36/512 (7%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGKL+I + +K+ + + ++ W + + L+I LK+ GF +
Sbjct: 19 PGKLRIAPSGLGWKSPSLAEPFTLPISEIRRFCWSRFARGYELKIILKSKDPVSLDGFSQ 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
++D + + K NF + + +KE S++GWNWG F+G+ L FDVN+ AFEIP+ V+
Sbjct: 79 EDLDDLINVIKQNFDMGIEQKEFSIKGWNWGEANFLGSELVFDVNSRPAFEIPISAVTNT 138
Query: 140 -TTGKNEVTVEFHPNDE------AAESLIEMRFYIP---TNEIAGDTDPVE-----AFKD 184
+GKNEV +EF D+ + L+EMR Y+P E A D + VE F +
Sbjct: 139 NLSGKNEVALEFSTTDDKQIPSAQVDELVEMRLYVPGTTAKEDAADGEEVEQNAANLFYE 198
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
S+ +A + A GDAI F+EI LTPRGRYDI ++ + +L GKT+DYK+ S++ +F
Sbjct: 199 SLKERADIGQAAGDAIVSFSEILLLTPRGRYDIDMYETCMRLRGKTYDYKVEYSSINSLF 258
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
LP D + FVI L+PP++QGQTRY FL F +DE E++L E LKEKY K+
Sbjct: 259 LLPKPDEQHVVFVIGLEPPLRQGQTRYPFLVTQFVRDEDMEVDLNIEETVLKEKYADKVK 318
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
P +EV+++I + + RK+T P F H G +AV CSYKA G +Y L++ F+FI
Sbjct: 319 ASYDQPAFEVVSQIFRGLTGRKVTTPAEFLSHEGHAAVKCSYKANEGQLYCLDKSFLFIP 378
Query: 365 KPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
KP + + +I V +R G S R+FD L+SG + FS+I + E L F+
Sbjct: 379 KPTLLMNTSDITRVTLSRVGMSVSAARTFDLTFTLRSGTSYQFSNINRVEQSALVAFLES 438
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFN 481
K++++ N D E L + + + +++ +E S DEDF
Sbjct: 439 KQIKIHN----------------DLADETQQTLLTSALDDEDEEGDEEMEEALSEDEDFQ 482
Query: 482 PDQAESDVAEEYDSNPTPTDSDEDSDASEGTK 513
++ESDVAEEYD N +D +E + +EG++
Sbjct: 483 A-ESESDVAEEYDENAESSD-EEGASGAEGSE 512
>gi|74195932|dbj|BAE30524.1| unnamed protein product [Mus musculus]
Length = 257
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 194/258 (75%), Gaps = 1/258 (0%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF ++ E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 1 MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G +LS
Sbjct: 61 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
FD+ + FEIPL +VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 121 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 179
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ +F LHGKTFDYKIP +TV
Sbjct: 180 AFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV 239
Query: 241 LRMFTLPHKDGRQNFFVI 258
LR+F LPHKD RQ FFVI
Sbjct: 240 LRLFLLPHKDQRQMFFVI 257
>gi|217853|dbj|BAA02719.1| high mobility group protein [Arabidopsis thaliana]
Length = 644
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 334/644 (51%), Gaps = 36/644 (5%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + +S RG PG LKI +K + GK +++ D+ V+W K+ +
Sbjct: 1 MADGHFLNNISLSGRGGKNPGLLKINSGGXQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF++ ++ + SFF++++ EK+LSV G NWG GN L+
Sbjct: 61 QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+VT+EF L+E+ F+IP + +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFMLMILLVLMRKTPLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F D+++ A V DA+ F I LTPRGRY++++ SF +L +
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQEQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F VISLDPPI++GQT Y + + F D E EL S
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++ + K++ KL++ G +EV +++ + KIT PG FR AV S KA G
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIE 408
+YPLE+GF F+ KPP I +EI V F R G + FD I LK+ H F +I+
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420
Query: 409 KEEYGKLFDFIREKKLRVKNT-GKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDE 467
+ EY L+ FI K L++ N G G G +DD+ D +L R++ +AA+ DE
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQAADESDE 480
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRK----- 522
+DED D+D +PT +DSDASEG + KEKS K
Sbjct: 481 EDEDFVMGEDDD--------------GGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKK 526
Query: 523 ----TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG 578
+ + K + D+ SS +KKKD NAPK+ MS +M + R+ IKK++PG
Sbjct: 527 EASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPG 586
Query: 579 ISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
I+F E+ K G+ K+ ++ K+ Y + + YK
Sbjct: 587 IAFGEVGKVLGDKCVKCLLMIKSHMKPRLQVDKQRYKDEISDYK 630
>gi|320583136|gb|EFW97352.1| DNA polymerase delta binding protein FACT complex subunit, putative
[Ogataea parapolymorpha DL-1]
Length = 527
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 286/530 (53%), Gaps = 53/530 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLHRF 74
G+++I D + +K + + P ++ +W + W LRI KN +
Sbjct: 17 GRMRIADSGLGWKAQAAPGSTVKSTPFLLPSDEISSAHWSRGSRGWELRIDTKNKGVVML 76
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF + +++ + + + NF + + +E S+RGWNWG T+ N L F+VNN AFEIP
Sbjct: 77 DGFDQQDLNGLKNELQRNFSVQLEVREHSLRGWNWGKTQLTRNELIFNVNNRPAFEIPYS 136
Query: 135 DVSQCTTG-KNEVTVEF-----HPNDEAAESLIEMRFYIPT--------------NEIAG 174
D++ KNEVTVE H + + L+EM+ YIP NE +
Sbjct: 137 DITNSNLSRKNEVTVEMNLGEKHEPERTGDELVEMKLYIPGTLSEEEEEGEDGEKNEASE 196
Query: 175 DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYK 234
+ F D + +A V TG+AI F EI LTPRGRYD+ ++++F +L GKT+DYK
Sbjct: 197 PRSLAQVFSDQLREKADVGQVTGEAIVSFEEILFLTPRGRYDVDMYDTFMRLRGKTYDYK 256
Query: 235 IPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQE 294
+ S + R+F+LP + V+ +DPP++QGQTRY FLT+ + +E E+EL ++E
Sbjct: 257 LQYSQIQRIFSLPKLYQLNHLIVLQVDPPLRQGQTRYSFLTIQVSSEEEIEVELNLDDEE 316
Query: 295 LKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIY 354
+ KY+ +L+K + TY VM I+K R++ VPG+F A++CS KA G +Y
Sbjct: 317 YESKYKERLNKTYNNNTYMVMTSILKGFTERRVVVPGNFMSKDSQVAISCSLKANEGQLY 376
Query: 355 PLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGVL-HTFSSIEKE 410
PLE+ +F+ KP + I + EI + F+R G G++R+FD E+ L++G H+F ++++
Sbjct: 377 PLEKCLLFVTKPTVLIPYSEITNIVFSRIGSGTGASRTFDMEVNLRNGARSHSFGNMDRG 436
Query: 411 EYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED-- 468
E L +F + K L+V+N DEK LA E+ D D
Sbjct: 437 EQTLLENFFKSKNLKVRN-----------------DEKVAQEMLASAMAESDGDSDMDMG 479
Query: 469 DEDEDESTDEDF-NPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
D+DES DEDF + D + SDVAEE+DS+ + ++ ED E KKK K
Sbjct: 480 SADDDESPDEDFKDEDMSGSDVAEEFDSDASVSEDGED---DEPQKKKPK 526
>gi|213407046|ref|XP_002174294.1| FACT complex subunit pob3 [Schizosaccharomyces japonicus yFS275]
gi|212002341|gb|EEB08001.1| FACT complex subunit pob3 [Schizosaccharomyces japonicus yFS275]
Length = 507
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 247/428 (57%), Gaps = 19/428 (4%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGKL+I + +K+ + + ++ W K + L++ LKNG GF+
Sbjct: 19 PGKLRIAASGLGWKSPDIKEPFTVPQSEIRRFCWSKFARGYELKLILKNGIPVSLDGFEL 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ + + + K NF + + +K+ S++GWNWG T F+G+ L F+VN+ AFEIP+ V
Sbjct: 79 EDFEDLQNVIKQNFDMTIEQKDFSLKGWNWGKTNFLGSDLVFEVNSRPAFEIPVASVVNT 138
Query: 140 -TTGKNEVTVEFHPNDEA------AESLIEMRFYIP---------TNEIAGDTDPVEAFK 183
+GKNEV +EF ++ ++ L+EMR YIP E A + + F
Sbjct: 139 NLSGKNEVALEFSTQNDGPVPSAQSDQLVEMRLYIPGTTTREEAAEGEEATEQNLASVFY 198
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+++ +A + TGDAI F++I LTPRGRYDI ++ +L GKT+DYK+ ++++R+
Sbjct: 199 ETLKERADIGQVTGDAIVSFSDILLLTPRGRYDIDMYEDCMRLRGKTYDYKVDYTSIIRL 258
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKL 303
F LP D + FVI LDPP++QGQTRY FL F +DE E++L E L+EKY +L
Sbjct: 259 FLLPKPDDQHVVFVIGLDPPLRQGQTRYPFLVTQFIRDEDMEVDLNIDEGLLREKYADRL 318
Query: 304 DKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
P YEV+++I + + R++T P +F H G +AV CSYKA G +Y LE+ F+FI
Sbjct: 319 KSSYDQPAYEVVSQIFRGLTGRRVTTPSNFSSHHGHTAVKCSYKANEGQLYVLEKSFLFI 378
Query: 364 HKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
KPPI+I +IA V +R G S R+FD ++SG + FS+I +EE L ++I
Sbjct: 379 PKPPIYIGMGDIARVTLSRVGASVSAARTFDLTFTMRSGTSYQFSNINREEQNVLVEYIE 438
Query: 421 EKKLRVKN 428
K +++ N
Sbjct: 439 SKHIKIHN 446
>gi|190344865|gb|EDK36631.2| hypothetical protein PGUG_00729 [Meyerozyma guilliermondii ATCC
6260]
Length = 546
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 277/496 (55%), Gaps = 42/496 (8%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVN--WQKLVGTWALRIFLKNGSLHRFAGFK 78
G++++ D + +K K E P + ++ W + + LR+ KN + GF
Sbjct: 49 GRMRVADSGLGWKASGEAK-EPFLLPTEEMLSTIWSRGCRGYELRVQTKNKGVISLDGFA 107
Query: 79 ETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQ 138
+ ++ + NF +++ +E S+RGWNWG + F N L F VNN AFE+P D+S
Sbjct: 108 VEDYAQLKQEMQRNFSLNLEHREHSLRGWNWGKSDFARNELVFQVNNKPAFELPYADISN 167
Query: 139 C-TTGKNEVTVEFHPND-EAAESLIEMRFYIPT-------------NEIAGDTDP-VEAF 182
TGKNEV VE + + +A + L+EMRFYIP E A T+ F
Sbjct: 168 ANLTGKNEVAVEMNLDSGKAGDELVEMRFYIPGMVENEEKKDEKDEAETAVSTETQASVF 227
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
+ + ++A++ G+AI F+++ LTPRGRYDI ++ +L GKT+DYKI + R
Sbjct: 228 YEQLKDRANIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPGSLRLRGKTYDYKIQYKQIER 287
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F+LP D V+ +DPP++QGQTRY FL + F ++E E+EL S+++ EKY+ +
Sbjct: 288 IFSLPKPDDTHQLMVLQIDPPLRQGQTRYPFLVMQFAKEEEIEVELNVSDEDY-EKYKER 346
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L + TY VM+ K + R++ VPGSF+ V+CS KA+ GY+YPLER F+F
Sbjct: 347 LKRSYDAQTYLVMSHCFKGLSERRVIVPGSFQSRFAQPGVSCSLKASEGYLYPLERCFLF 406
Query: 363 IHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
+ KP I+I F E+++V+ +R+G ++R+FD E+ LK H F++IEKEE + ++
Sbjct: 407 VTKPTIYIPFSEVSSVSMSRTGTGGVTSRTFDLEVTLKGSGSHVFANIEKEEQETIENYC 466
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED 479
K L+V+N +EK A +A+ EA E D D ES D D
Sbjct: 467 TSKGLKVQN-----------------EEKIAKAMIAKAINEADEDVDMGSAD-SESEDGD 508
Query: 480 FNPDQAESDVAEEYDS 495
F+ Q+ESDVAEE+DS
Sbjct: 509 FDA-QSESDVAEEFDS 523
>gi|66803987|ref|XP_635805.1| structure-specific recognition protein 1 [Dictyostelium discoideum
AX4]
gi|74851853|sp|Q54G78.1|SSRP1_DICDI RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein
gi|60464131|gb|EAL62292.1| structure-specific recognition protein 1 [Dictyostelium discoideum
AX4]
Length = 527
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 271/466 (58%), Gaps = 45/466 (9%)
Query: 6 EFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG-TWALRI 64
+F +S R + G LK T NI +K++ GK+E ++ D+ NW ++ + L +
Sbjct: 10 QFNNISLGGRISGTRGILKFTTNNITWKSEN-GKIETVSSSDIKRANWARVTPRIFQLIL 68
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEK-ELSVRGWNWGGTKFIGNVLSFDV 123
+K G+ +F GFKE + + + + + + E ELS +G NWG K G ++ F
Sbjct: 69 SIKGGATVKFDGFKEQDYEVVRKYLSDQYNVSPLEIIELSSKGCNWGEVKVNGPMIQFTT 128
Query: 124 NNT-TAFEIPLRDVSQCTTG---KNEVTVEFHPN---DEAAESLIEMRFYIPTN------ 170
++ FE P+ +VSQ G KNE+T+EFH + D+ E+++EMRF+ P
Sbjct: 129 DHGKVGFEFPISEVSQSVIGANNKNELTLEFHHDKAMDDDDETMVEMRFFTPIRPSKEGE 188
Query: 171 ----------------------EIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQC 208
E + +E F+ ++MN++ +++ G ++ VF+ IQ
Sbjct: 189 EGGKEKKVGEDGEEDEEDEEDAEKEEEISALEQFQQTIMNKSDMVSNVGKSLVVFSAIQF 248
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRGR DI+++ +F +LHGKT DYK+P ++ R+F D + FF+ISLDPPI+QGQ
Sbjct: 249 LTPRGRIDIEMYPTFLKLHGKTHDYKVPYESISRLFQFFRPDQKHIFFIISLDPPIRQGQ 308
Query: 269 TRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKIT 328
T+Y L + F +E +EL ++ EL++K++ +L ++G ++ KI+K + +KIT
Sbjct: 309 TKYAHLVIQFQAEENIHLELNLTD-ELQQKFKDQLSPIMNGNANALICKILKALTGKKIT 367
Query: 329 VPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR------ 382
+PG+F+ +G +++ CS KA GY+YPLER F F+HKPP +I+FE+I+ + FAR
Sbjct: 368 IPGNFQSDSGANSIKCSLKANEGYLYPLERCFFFVHKPPTYIKFEDISNIEFARYGAPSV 427
Query: 383 SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
GGS R+FD I LK+ F +I++EEY LF+F++EKKL + N
Sbjct: 428 RGGSNRTFDLSINLKNSTSIQFVNIQREEYPSLFNFLKEKKLSILN 473
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 327/648 (50%), Gaps = 68/648 (10%)
Query: 15 RGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
RGA C G+++ + Q + FK + T K + D+ +++ LRI LK+G F
Sbjct: 17 RGASCRGRMRCSPQGLAFKREATDKTQTFYKSDMASCETKRVARGHQLRIKLKSGGHATF 76
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GFK +++ + FFK ++ +D+ ELS++G N G +F GN L FDV+ AFE+PL
Sbjct: 77 EGFKSNDMNAMIDFFKKHYDLDIKIVELSLKGNNSGSARFHGNFLVFDVDGKPAFEVPLN 136
Query: 135 DVSQCTTGKNEVTVEFHPNDEA--AESLIE-MRFYIPTNEIAGDTDPVEAFKDSVMNQAS 191
V T+ K E +++F +++A E +E MRF + + + E F ++V +AS
Sbjct: 137 AVGNVTSQKYEASIDFIQDEDADDNEQRVESMRFLVIPDPESEQYAKTEEFVENVKARAS 196
Query: 192 VINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDG 251
+ T AI ++ L PRGR+D++++ SF QL G T+D+++ + ++ LP D
Sbjct: 197 IAEYTSRAICTIGKLSFLVPRGRFDVELYPSFMQLRGSTYDHRLFYDYISHIYLLPRPDD 256
Query: 252 RQNFFVISLDPPIKQGQTRY-HFLTLLFNQDETSEMELPFSEQELKEKYE--------GK 302
+ + V+++DPP++ GQTRY H L + E +++ + + E++ +
Sbjct: 257 GE-YIVLAVDPPLRHGQTRYPHVLLQFTREHEGADVVVNVTSDEVRSSLSYLTESIPADQ 315
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
+ +GP ++++++K + RKI PGSF G +AV C+YKA G +YPL+RGF+F
Sbjct: 316 AEVTETGPLASILSRLLKALTKRKIITPGSFTSSEGFAAVNCTYKANRGTLYPLDRGFLF 375
Query: 363 IHKPPIHIRFEEIATVNFAR----SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDF 418
+HKP +HI V F R S T+SFD + F + ++E L DF
Sbjct: 376 LHKPLLHISIVRNLRVTFDRVKESSSRDTKSFDMRLLHPERGEFEFRGLGQDELQPLIDF 435
Query: 419 IREKKLRVKNTGKGEKPNYKED---FGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES 475
+R K RV G E P D F SS+DE ++ R + DD E D S
Sbjct: 436 LRLK--RVAIEGLDEAPAAAGDDDGFDSSEDED----HVVR----PGDFDDGSSE-SDHS 484
Query: 476 TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKT------------ 523
ED D ES + E D ++D KKK+ KSR++
Sbjct: 485 FAED---DVEESSMDSEEDEQLQDELVEDDMLGQAPAKKKRASKSRQSKQRDDDEEDDDD 541
Query: 524 ------------ITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREK 571
I + +KP KSKK T++ K PKK +AY +W + R K
Sbjct: 542 DEDEDEDEDEDDIIVEDKPVKSKK-------KTQKASAAKRGPKKAKTAYALWSSSARSK 594
Query: 572 IKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALK 619
+K+ +P +SF E++KK G+ W+ ++ ++KAE++E KAKED LK
Sbjct: 595 LKEQHPDLSFGELSKKLGQAWQDLADEDKAEWNE---KAKEDRQRYLK 639
>gi|150865428|ref|XP_001384641.2| DNA polymerase delta binding protein [Scheffersomyces stipitis CBS
6054]
gi|149386684|gb|ABN66612.2| DNA polymerase delta binding protein [Scheffersomyces stipitis CBS
6054]
Length = 546
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 251/452 (55%), Gaps = 48/452 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFV---------NWQKLVGTWALRIFLKNGSL 71
G+++I D + +K G NG F+ W + + LR+ KN +
Sbjct: 18 GRMRIADSGLGWKASSAGS----NGNADPFLLPSEEILTAQWSRSSRGYELRVQTKNKGV 73
Query: 72 HRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEI 131
GF + K+ + NF +++ KE S+RGWNWG F N L F VNN AFEI
Sbjct: 74 VMLDGFDVEDFTKLKQELQRNFSLNLEHKEHSLRGWNWGKNDFARNELVFQVNNKPAFEI 133
Query: 132 PLRDVSQCT-TGKNEVTVEFHPN---DEAAESLIEMRFYIP------------------- 168
P +S TGKNEV +EF+ + A + ++EMRFY+P
Sbjct: 134 PYDVISNSNLTGKNEVAIEFNLDTAPSRAGDEMVEMRFYVPGVVENESNKLEVKDEGENS 193
Query: 169 --------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
+++ A +T +AF + V ++AS+ G+AI F+++ LTPRGRYDI ++
Sbjct: 194 ENGEKPSTSSDSAQETSAAQAFYEQVKDRASIGQVAGEAIVSFSDVLFLTPRGRYDIDMY 253
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
S +L GKT+DYKI + R+F+LP D + ++ +DPP++QGQTRY FL L F +
Sbjct: 254 ASSLRLRGKTYDYKIQYKQIERIFSLPKPDDAHHLIILQIDPPLRQGQTRYPFLVLQFAR 313
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTS 340
+E +E+EL SEQE + KY+ +L K PT VM+ K + R++ VPGSF+
Sbjct: 314 EEETEVELNLSEQEYETKYKDRLKKSYDAPTQLVMSHCFKGLTERRLIVPGSFQSRFLQP 373
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
++CS KA+ GY+YPL+R F+F+ KP I+I F EI+ + +R+GG ++R+FD EI ++
Sbjct: 374 GISCSLKASEGYLYPLDRCFLFVTKPTIYIPFSEISNITMSRTGGGVSASRTFDLEINVR 433
Query: 398 -SGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
S H F SI++EE + ++ EK +RVKN
Sbjct: 434 GSNQSHIFGSIDREEQETIENYCAEKGIRVKN 465
>gi|255724304|ref|XP_002547081.1| hypothetical protein CTRG_01387 [Candida tropicalis MYA-3404]
gi|240134972|gb|EER34526.1| hypothetical protein CTRG_01387 [Candida tropicalis MYA-3404]
Length = 537
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/493 (35%), Positives = 280/493 (56%), Gaps = 44/493 (8%)
Query: 56 LVGTWA-------LRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWN 108
LV +W+ LR+ KN + GF + + K+ NF+I++ KE ++RGWN
Sbjct: 54 LVASWSRGSRGYELRVQTKNKGVVSLDGFHQDDFTKLKQELTRNFQINMEHKEHALRGWN 113
Query: 109 WGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPN-DEAAESLIEMRFY 166
WG T N L F+VNN +FEIP +++ TGKNEV++E + + + + ++EMRFY
Sbjct: 114 WGKTDLARNELVFNVNNKPSFEIPYENINNSNLTGKNEVSIELNLDANRYGDEIVEMRFY 173
Query: 167 IPT---NEIA---------------GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQC 208
+P NE +T + F + + ++A + G+AI F+++
Sbjct: 174 VPGTIENETVVKSENNGEIVEEEVVNETSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLF 233
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRGRYDI ++ + +L GKT+DYKI + R+F+LP D + ++ +DPP++QGQ
Sbjct: 234 LTPRGRYDIDMYPTSLRLRGKTYDYKIQYEQIERIFSLPKPDDDHHLLILQIDPPLRQGQ 293
Query: 269 TRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKIT 328
TRY FL L F +DE +E+EL SE++ ++KY+ +L K PT VMA ++ + RK+
Sbjct: 294 TRYPFLVLQFVRDEETELELNVSEEDFEKKYKDRLKKTYDAPTPVVMAHCLRGLTERKLI 353
Query: 329 VPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG--- 385
PGSF+ + ++CS KA+ G++YPL+R F+F+ KP ++I + EI+++ +R+GG
Sbjct: 354 TPGSFQSRYLQAGISCSVKASEGHLYPLDRCFLFVTKPTLYIPYSEISSIVMSRTGGGVS 413
Query: 386 STRSFDFEIE-LKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSS 444
++R+FD E+ + S H F SI++EE + +F +EK ++VKN K K + +
Sbjct: 414 ASRTFDLEVNVIGSNQSHIFGSIDREEQETIENFCKEKGIKVKNEEKLAKARLAK---AL 470
Query: 445 DDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDE 504
+ E D A V +A+ D EDD D +D SDVAEE+DS+ + DE
Sbjct: 471 EQEANDDDDDADVDMGSADEDSEDDGDFQSGSD---------SDVAEEFDSDAASSSGDE 521
Query: 505 D-SDASEGTKKKK 516
D SD E KKK
Sbjct: 522 DMSDKDERPPKKK 534
>gi|328771179|gb|EGF81219.1| hypothetical protein BATDEDRAFT_10843, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 502
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 284/511 (55%), Gaps = 46/511 (9%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+ K++D + +K++ T +++ + D+ F++W ++ + LR+ ++GS+ F GF +
Sbjct: 1 GRFKLSDAGLGWKSQATSEIKTVPAADIRFLHWLRVARDYQLRVTRQDGSIIMFDGFPKD 60
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ + S ++ + + + S+RG+NWG F ++LSF+V+ TAFEIPL VS
Sbjct: 61 SFEYLSSIANQHYNVPLEVVDTSLRGYNWGEPNFQSSILSFNVDKKTAFEIPLNQVSNTA 120
Query: 141 TG-KNEVTVEFHPNDEAA-------------ESLIEMRFYIPTN-------EIAGDTDPV 179
G KNEV++EFHP A ++L+E+RFY+P N + G+
Sbjct: 121 VGNKNEVSIEFHPPIANATDPSPIGRSRAKEDALVEIRFYLPGNISQQALYDAEGEVLTA 180
Query: 180 EA-FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
A F D+V +A + + ++I F+E+ C+TPR R+ +++ ++F+L GK+ DYKI S
Sbjct: 181 AALFCDTVKQKADMDSILSESIVSFSELLCITPRSRFVVEMHEAYFRLRGKSHDYKILYS 240
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
+ RMF +P D F++ LDPP++QGQTRY +L F ++E E++L E ++EK
Sbjct: 241 AIKRMFLVPKPDDLHYMFIVGLDPPLRQGQTRYPYLVFQFGREEEIEIDLTLEESVIQEK 300
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYIYPLE 357
Y G L+K GP YEV++ + K + +K+ + ++ G S + CS KA +YPL+
Sbjct: 301 YAGALEKSYDGPVYEVVSDVFKGLSKKKVIMSSLQYQSANGQSGLKCSQKANEAILYPLD 360
Query: 358 RGFIFIHKPPIHIRFEEIATVNFAR----SGGSTRSFDFEIELKSGVLHTFSSIEKEEYG 413
+ F+ I KPPI +I V F+R S ST++F+ + L +GV ++FSSI +EEYG
Sbjct: 361 KCFLAIPKPPIFFSHSDITAVTFSRVSSGSTASTKTFEVKFSLVTGVEYSFSSISREEYG 420
Query: 414 KLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED 473
L +F K+L V+N E Y+E SDD+ E +V + E+DED
Sbjct: 421 PLEEFCLSKRLPVRNEIADEAVTYRE----SDDDGEKSGGRRKVSYQ------EEDEDFV 470
Query: 474 ESTDEDFNPDQAESDVAEEYDSNPTPTDSDE 504
++D SDV EE+ + +D DE
Sbjct: 471 GASD---------SDVGEEFSEDYQSSDGDE 492
>gi|255714278|ref|XP_002553421.1| KLTH0D16390p [Lachancea thermotolerans]
gi|238934801|emb|CAR22983.1| KLTH0D16390p [Lachancea thermotolerans CBS 6340]
Length = 536
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 287/533 (53%), Gaps = 51/533 (9%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKISSSGGSAAGQQKAPLLLPATELASVQWSRGCRGYELKINTKNQGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + FK F + V ++E S+RGWNWG N + F N FEIP
Sbjct: 77 QLDGFSQEDFNLIKNDFKRRFNVQVEQREHSMRGWNWGKADMARNEMVFAYNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPTN------------EIAGD 175
+S T K EV +EF E A + ++EMRF++P E D
Sbjct: 137 YAHISNTNLTAKTEVAIEFDLTKEDYNPAGDEMVEMRFHVPGTIQEEQDENAPKAEGQED 196
Query: 176 TD-------PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
D E+F + + +A + +GDAI F ++ TPRGRYDI I+ + +L G
Sbjct: 197 VDMEKEQKSAAESFYEELKEKADIGEVSGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRG 256
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT++YK+ + + R+F+LP D + V+S++PP++QGQT Y FL + F + E +E++L
Sbjct: 257 KTYEYKLQLRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTSYPFLVIQFQRSEETEVQL 316
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
++E ++ Y+ KL K+ T+ V++ ++K + R++ VPG ++ AV+CS+KA
Sbjct: 317 NVEDEEFEKLYKDKLMKQYDAQTHVVLSHVLKGLTGRRVIVPGQYKSKYEQCAVSCSFKA 376
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGV-LHTF 404
GY+YPL+ F+F+ KP +++ F +++ VN +R+G +T R+FD E+ ++S TF
Sbjct: 377 NEGYLYPLDNAFLFLTKPTLYMPFGDVSMVNISRAGKTTTSARTFDLEVVMRSNSGSTTF 436
Query: 405 SSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
++I KEE L +F++ K LRVKN K + + GS D + D + AAE
Sbjct: 437 ANISKEEQQLLENFLKSKNLRVKNEEKDAQQRLENALGS--DSNDEDINMG----SAAE- 489
Query: 465 DDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
+DES DEDF +E DVAEE+DS+ P+DSD D S+G KK K
Sbjct: 490 -------DDESVDEDFQA-SSEDDVAEEFDSDAPPSDSDGDEGDSQGPSKKAK 534
>gi|50293701|ref|XP_449262.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608533|sp|Q6FKI2.1|POB3_CANGA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49528575|emb|CAG62236.1| unnamed protein product [Candida glabrata]
Length = 543
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 281/523 (53%), Gaps = 70/523 (13%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKVSTSGGSASAQNKAPFLLPATELSTVQWSRGCRGFELKINTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF E + + I F F I V KE S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLEGFSEDDFNIIKGDFHRRFSIQVEHKEHSLRGWNWGQTDLARNEMVFALNGKPVFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPTNEIAGDTDPV-------- 179
++ T KNEV VEF+ D+ A + ++EMRFY+P + + + P
Sbjct: 137 YARINNTNLTAKNEVAVEFNIQDDTYQPAGDEMVEMRFYLPGSVVVDEDQPAPKKEGEEE 196
Query: 180 -------------EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQL 226
EAF + + N+A + GDAI F ++ TPRGRYDI I+ + +L
Sbjct: 197 GEEAAETETKSLAEAFYEELKNKADIGEIAGDAIVSFQDVFFTTPRGRYDIDIYENSIRL 256
Query: 227 HGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEM 286
GKT++YK+ + + R+ +LP D + V+++DPP++QGQT Y FL L F +DE +E+
Sbjct: 257 RGKTYEYKLQHNQIQRIVSLPKADDINHLVVLAMDPPLRQGQTTYPFLVLQFQKDEETEV 316
Query: 287 ELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSY 346
+L S+QE +EKY+ KL K+ T+ V++ ++K + R++ VPG ++ AV+CSY
Sbjct: 317 QLNLSDQEYEEKYKDKLKKQYDSKTHIVISHVLKGLTGRRVVVPGEYKSKYEQCAVSCSY 376
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGVLHT 403
KA GY+YPL+ F F+ KP ++I F ++++V +R+G S+R+FD E+ L+S T
Sbjct: 377 KANEGYLYPLDNAFFFLTKPTLYIPFNDVSSVVISRAGQTSTSSRTFDLEVILRSNRGST 436
Query: 404 -FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAA 462
F +I KEE L +F++ K LRVKN +EK+ A+V+ ++A
Sbjct: 437 IFGNISKEEQQLLENFLKSKNLRVKN-----------------EEKD-----AQVRLQSA 474
Query: 463 ERDDEDDED--------EDESTDEDFNPDQAESD--VAEEYDS 495
D DDED +DES DEDF+ + D VAEE+DS
Sbjct: 475 LGSDSDDEDVNMGSAGEDDESVDEDFHVSSGDDDDEVAEEFDS 517
>gi|448088706|ref|XP_004196610.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|448092858|ref|XP_004197641.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|359378032|emb|CCE84291.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|359379063|emb|CCE83260.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
Length = 537
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 300/537 (55%), Gaps = 59/537 (10%)
Query: 21 GKLKITDQNIVFKNKKTG-KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLHR 73
G+++I D + +K + + Q N P ++ +W + + LR+ KN +
Sbjct: 18 GRMRIADSGLGWKAASSNNETAQNNAPFLLPSEEILSYSWSRGSRGYELRVQTKNQGVVM 77
Query: 74 FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPL 133
GF + K+ + NF + + KE S+RGWNWG T N L F VNN AFE+P
Sbjct: 78 LDGFDVEDFAKLKQELQRNFHLTLEHKEHSLRGWNWGKTDLAKNELVFQVNNKPAFELPY 137
Query: 134 RDVSQCT-TGKNEVTVEFHP---NDEAAESLIEMRFYIPT---NE--IAGDTDPVEA--- 181
D+S TGKNEV VE + +++ + L+EMRFYIP NE + +T+ E
Sbjct: 138 SDISNSNLTGKNEVAVELNLDNNHNKTGDELVEMRFYIPGVLENESTVKKETENGEVKQE 197
Query: 182 -------------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
F + + ++A + +G+AI F +I LTPRGRYDI ++ + +L G
Sbjct: 198 EEEEPEEVSAATVFYEQLKDRADIGQGSGEAIVSFGDILFLTPRGRYDIDMYPTSLRLRG 257
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT+DYKI + R+F+LP D + V+ +DPP++QGQTRY FL + F+++E E+EL
Sbjct: 258 KTYDYKIQYKQIERIFSLPKPDEAHHLLVLQIDPPLRQGQTRYPFLVIQFSKEEEIELEL 317
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
S++E ++KY+ +L + P + VM+ K + R++ VPG+F+ ++CS KA
Sbjct: 318 NVSDEEYEQKYKDRLKRTYDAPIHLVMSHCFKGLTERRLIVPGAFQSRQLQPGISCSLKA 377
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK-SGVLHTF 404
+ GY+YPL+R F+F+ KP I+I + E++ + +R+GG ++R+FD E+ L+ SG H F
Sbjct: 378 SEGYLYPLDRCFLFVTKPTIYIPYSEVSNITMSRTGGGVSASRTFDLEVNLRGSGQPHVF 437
Query: 405 SSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
+I++EE + F +K ++V+N +EK A LA+ E +
Sbjct: 438 GNIDREEQEVIESFCSQKGIKVRN-----------------EEKLARAMLAKAINEQDDD 480
Query: 465 DDEDDE----DEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
DDED + ++ES D+DF+ +ESDVAEE+DSN + +++ +D D + KKK K
Sbjct: 481 DDEDVDMGSAGDEESEDDDFHSG-SESDVAEEFDSNASESENSDD-DGEKPPKKKSK 535
>gi|357125689|ref|XP_003564523.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1-A-like
[Brachypodium distachyon]
Length = 637
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 340/642 (52%), Gaps = 41/642 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M++ F + RG PG+ K+ + +K K+ G V I+ D+ V W K+ +
Sbjct: 1 MSDGHLFNNILLGGRGGTNPGQFKVHPGGLSWK-KQGGNVIHIDKVDVTSVTWMKIPRCY 59
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L+I +G ++ F+GF+E + + +F + N I EK+LSV G NWGG G+ L+
Sbjct: 60 QLKIRTTDGLVYMFSGFREQDTSNLTNFMQKNMGILPDEKQLSVTGHNWGGIDIDGSTLT 119
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DV+Q GK +V +EFH +D +SL+E+ F++P + +
Sbjct: 120 FMVGSKQAFEVSLPDVAQTQMQGKTDVLLEFHVDDTTGANEKDSLMELSFHVPMSNTQFV 179
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + + ++++ + ++ A++ F I LTPRGRY++++ S+ +L +
Sbjct: 180 GDENRSSAQILWETILGEVDA-GSSEAAVSTFEGIAILTPRGRYNVELHLSYLRLQAQAN 238
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI ++++R+F LP + V++LDPPI++GQT Y + + F + E+ + S
Sbjct: 239 DFKIQYTSIVRLFILPKSNNPHTMVVVTLDPPIRKGQTLYPHIVIQFETETVVEINVKLS 298
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
+ L EKY+ +L++ G +EV K+++ + K+T PGSFR AV S KA G
Sbjct: 299 TELLAEKYKDRLEESYQGLIHEVFIKVLRGLSAAKVTRPGSFRSSQDGYAVQSSLKAEDG 358
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR-----SGGSTRSFDFEIELKSGVLHTFSS 406
+YPLE+GF F+ KPP I EEI V F R +G S+ +FD ++LK+ H F +
Sbjct: 359 LLYPLEKGFFFLPKPPTLILDEEIEFVEFQRLGARGAGMSSHNFDLLVKLKNDQEHLFRN 418
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKED---FGSSDDEKEPDAYLARVKREAAE 463
I + E L +FI K L++ N G G+ + S DD +P +L R+K +A +
Sbjct: 419 IRRSECQNLSNFINGKHLKMMNLGDGQGTSGGVTDVIHDSGDDTVDP--HLERIKNQAGD 476
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTD--SDEDSDASE-GTKKKKKEKS 520
E + DEDF D+ D +PTD ++SDASE G +K+K
Sbjct: 477 E-------ESDEEDEDFVLDK---------DDGGSPTDDSGGDESDASESGDEKEKSSGK 520
Query: 521 RKTITISEKPRKSK-KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI 579
+ + + RK K + E S ++ KKD NAPK+ M+ ++ + R +K NP +
Sbjct: 521 KASSSKPPAKRKPKGGEGEDSEKRKRKSKKDPNAPKRAMTPFLCFSISERAAVKGSNPDL 580
Query: 580 SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
EI KK G +W+ +S++EK Y ++ K+ Y E AY
Sbjct: 581 HSNEITKKLGLMWQKMSTQEKQPYIQQSLVDKKRYEEESAAY 622
>gi|146422835|ref|XP_001487352.1| hypothetical protein PGUG_00729 [Meyerozyma guilliermondii ATCC
6260]
Length = 546
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 276/496 (55%), Gaps = 42/496 (8%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVN--WQKLVGTWALRIFLKNGSLHRFAGFK 78
G++++ D + +K K E P + ++ W + + LR+ KN + GF
Sbjct: 49 GRMRVADLGLGWKASGEAK-EPFLLPTEEMLSTIWSRGCRGYELRVQTKNKGVILLDGFA 107
Query: 79 ETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQ 138
+ ++ + NF +++ +E S+RGWNWG + F N L F VNN AFE+P D+S
Sbjct: 108 VEDYAQLKQEMQRNFLLNLEHREHSLRGWNWGKSDFARNELVFQVNNKPAFELPYADISN 167
Query: 139 C-TTGKNEVTVEFHPND-EAAESLIEMRFYIPT-------------NEIAGDTDP-VEAF 182
TGKNEV VE + + +A + L+EMRFYIP E A T+ F
Sbjct: 168 ANLTGKNEVAVEMNLDSGKAGDELVEMRFYIPGMVENEEKKDEKDEAETAVSTETQASVF 227
Query: 183 KDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLR 242
+ + ++A++ G+AI F+++ LTPRGRYDI ++ +L GKT+DYKI + R
Sbjct: 228 YEQLKDRANIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPGSLRLRGKTYDYKIQYKQIER 287
Query: 243 MFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK 302
+F+LP D V+ +DPP++QGQTRY FL + F ++E E+EL S+++ EKY+ +
Sbjct: 288 IFSLPKPDDTHQLMVLQIDPPLRQGQTRYPFLVMQFAKEEEIEVELNVSDEDY-EKYKER 346
Query: 303 LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIF 362
L + TY VM+ K + R++ VPGSF+ V+CS KA+ GY+YPLER F+F
Sbjct: 347 LKRSYDAQTYLVMSHCFKGLSERRVIVPGSFQSRFAQPGVSCSLKASEGYLYPLERCFLF 406
Query: 363 IHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFI 419
+ KP I+I F E+ +V+ +R+G ++R+FD E+ LK H F++IEKEE + ++
Sbjct: 407 VTKPTIYIPFSEVLSVSMSRTGTGGVTSRTFDLEVTLKGSGSHVFANIEKEEQETIENYC 466
Query: 420 REKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDED 479
K L+V+N +EK A +A+ EA E D D ES D D
Sbjct: 467 TLKGLKVQN-----------------EEKIAKAMIAKAINEADEDVDMGSAD-SESEDGD 508
Query: 480 FNPDQAESDVAEEYDS 495
F+ Q+ESDVAEE+DS
Sbjct: 509 FDA-QSESDVAEEFDS 523
>gi|254565083|ref|XP_002489652.1| Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)
[Komagataella pastoris GS115]
gi|238029448|emb|CAY67371.1| Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)
[Komagataella pastoris GS115]
Length = 528
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 300/531 (56%), Gaps = 49/531 (9%)
Query: 19 CPGKLKITDQNIVFKNKKT----GKVEQINGP--DLDFVNWQKLVGTWALRIFLKNGSLH 72
PG+ +IT + +K GK + P D+ V+W + W LR++ +N +
Sbjct: 16 APGRFRITSSGLGWKPSSQVPTKGKTDPFLLPSGDILSVSWSRGYRGWELRVYTRNDKVI 75
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
GF++ + ++ + + F +++ KE S+RGWNWG T+ L F+VNN A+EIP
Sbjct: 76 MLDGFEQQDFQQLKNEIQRTFNVNLEHKEHSLRGWNWGKTQLTRAELVFNVNNRPAWEIP 135
Query: 133 LRDVSQCT-TGKNEVTVEFHPN-------DEAAESLIEMRFYIPTNEIAGDTDPVEA--- 181
++S TG++E+++E +P + + L+E+R Y+P +I D D E
Sbjct: 136 YSEISNSNLTGRHEISMELNPKTVDENHYETLGDELVEVRLYVP-GQIDKDEDSTEGQDT 194
Query: 182 ----------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
F + + ++A + T +AI F +I LTPRGR++I ++ + +L G+++
Sbjct: 195 TEEAKSKSQLFYEQLKDKAD-FDTTSEAIVSFEDILFLTPRGRFEISMYANNLRLRGQSY 253
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
DYKI VLR+F+LP D R + ++ +DPP++QGQTRY FL + F+++E E+EL S
Sbjct: 254 DYKIQNKNVLRIFSLPRLDDRHHLVILQVDPPLRQGQTRYPFLVMQFDRNEELEVELNLS 313
Query: 292 EQELKEKYEGKLDKEL-SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
++E K KYEGKL++ + TY++++ ++ + R++ PGSF+ V CS KA+
Sbjct: 314 DEEYKSKYEGKLNRSYGTDSTYKILSHCLRGLTERRVITPGSFQSQHMQPGVNCSLKASE 373
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG--STRSFDFEIELKSGVLHTFSSIE 408
G IY L++ F KP +++ + I +V +R G ++R+FD E++ SG HTF++I
Sbjct: 374 GQIYLLDKCLFFATKPCVYLPYSGIISVVTSRGTGQSTSRTFDIEVQF-SGGSHTFANIN 432
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
K+E + DF++ + +RVKN EKP E G++ + + D+ + +A D
Sbjct: 433 KDEQKPIEDFLKGQGVRVKN----EKP--AEFLGNALVDDDDDSDDGDIAMGSAGED--- 483
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEK 519
DES DEDFN ++SDVAEEYDSN DEDSDAS G +KKK K
Sbjct: 484 ----DESVDEDFNAG-SDSDVAEEYDSN--AGSEDEDSDASSGEPEKKKPK 527
>gi|328350071|emb|CCA36471.1| FACT complex subunit POB3 [Komagataella pastoris CBS 7435]
Length = 559
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 300/531 (56%), Gaps = 49/531 (9%)
Query: 19 CPGKLKITDQNIVFKNKKT----GKVEQINGP--DLDFVNWQKLVGTWALRIFLKNGSLH 72
PG+ +IT + +K GK + P D+ V+W + W LR++ +N +
Sbjct: 47 APGRFRITSSGLGWKPSSQVPTKGKTDPFLLPSGDILSVSWSRGYRGWELRVYTRNDKVI 106
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
GF++ + ++ + + F +++ KE S+RGWNWG T+ L F+VNN A+EIP
Sbjct: 107 MLDGFEQQDFQQLKNEIQRTFNVNLEHKEHSLRGWNWGKTQLTRAELVFNVNNRPAWEIP 166
Query: 133 LRDVSQCT-TGKNEVTVEFHPN-------DEAAESLIEMRFYIPTNEIAGDTDPVEA--- 181
++S TG++E+++E +P + + L+E+R Y+P +I D D E
Sbjct: 167 YSEISNSNLTGRHEISMELNPKTVDENHYETLGDELVEVRLYVP-GQIDKDEDSTEGQDT 225
Query: 182 ----------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
F + + ++A + T +AI F +I LTPRGR++I ++ + +L G+++
Sbjct: 226 TEEAKSKSQLFYEQLKDKAD-FDTTSEAIVSFEDILFLTPRGRFEISMYANNLRLRGQSY 284
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
DYKI VLR+F+LP D R + ++ +DPP++QGQTRY FL + F+++E E+EL S
Sbjct: 285 DYKIQNKNVLRIFSLPRLDDRHHLVILQVDPPLRQGQTRYPFLVMQFDRNEELEVELNLS 344
Query: 292 EQELKEKYEGKLDKEL-SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
++E K KYEGKL++ + TY++++ ++ + R++ PGSF+ V CS KA+
Sbjct: 345 DEEYKSKYEGKLNRSYGTDSTYKILSHCLRGLTERRVITPGSFQSQHMQPGVNCSLKASE 404
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG--STRSFDFEIELKSGVLHTFSSIE 408
G IY L++ F KP +++ + I +V +R G ++R+FD E++ SG HTF++I
Sbjct: 405 GQIYLLDKCLFFATKPCVYLPYSGIISVVTSRGTGQSTSRTFDIEVQF-SGGSHTFANIN 463
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED 468
K+E + DF++ + +RVKN EKP E G++ + + D+ + +A D
Sbjct: 464 KDEQKPIEDFLKGQGVRVKN----EKP--AEFLGNALVDDDDDSDDGDIAMGSAGED--- 514
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEK 519
DES DEDFN ++SDVAEEYDSN DEDSDAS G +KKK K
Sbjct: 515 ----DESVDEDFNAG-SDSDVAEEYDSN--AGSEDEDSDASSGEPEKKKPK 558
>gi|241950954|ref|XP_002418199.1| DNA polymerase delta binding protein; FACT complex subunit,
putative; facilitates chromatin transcription complex
subunit, putative [Candida dubliniensis CD36]
gi|223641538|emb|CAX43499.1| DNA polymerase delta binding protein [Candida dubliniensis CD36]
Length = 538
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 304/537 (56%), Gaps = 53/537 (9%)
Query: 21 GKLKITDQNIVFK-NKKTGKVEQ---INGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAG 76
G+++I + + +K + +G V Q + + +W + + LR+ KN + G
Sbjct: 18 GRMRIAESGLGWKASTSSGSVSQPFLLPREGILIASWSRGSKGYELRVQTKNKGVVSLDG 77
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F + + ++ NF I++ KE S+RGWNWG T N L F+VNN AFE+P D+
Sbjct: 78 FDQDDFTQLKQELTRNFHINLEHKEHSLRGWNWGKTDLARNELIFNVNNKPAFEVPYADI 137
Query: 137 SQCT-TGKNEVTVEFHP-NDEAAESLIEMRFYIPT---NE----------------IAGD 175
S TGKNEV +EF+ N++ + ++EMRFY+P NE + +
Sbjct: 138 SNSNLTGKNEVAIEFNLDNNKNGDEIVEMRFYVPGTIENETTIVKSENNGDVVEEAVINE 197
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
T + F + + ++A + G+AI F+++ LTPRGRYDI ++ S +L GKT+DYKI
Sbjct: 198 TSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPSSLRLRGKTYDYKI 257
Query: 236 PISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
+ R+F+LP D + V+ +DPP++QGQTRY FL L F +DE +E+EL S+++
Sbjct: 258 QYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFLVLQFVKDEETELELNVSDEDF 317
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
++KY+ +L K PT VMA ++ + RK+ PG+F+ + V+CS KA+ GY++P
Sbjct: 318 EKKYKDRLKKTYDAPTNVVMAHCLRGLTERKLITPGAFQSRYLQAGVSCSVKASEGYLFP 377
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE-LKSGVLHTFSSIEKEE 411
L+R F+F+ KP ++I + EI+ V +R+GG ++R+FD E+ + S H FS+I++EE
Sbjct: 378 LDRCFLFVTKPTLYIPYSEISNVVMSRTGGGVSASRTFDLEVNVIGSNQSHVFSNIDREE 437
Query: 412 YGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED 471
L F +EK ++VKN +EK A LA+ + A DD+DD D
Sbjct: 438 QEFLESFCKEKGVKVKN-----------------EEKIAKARLAKALEQEANDDDDDDAD 480
Query: 472 EDESTDEDFNPDQ-----AESDVAEEYDSNPTPT--DSDEDSDASEGTKKKKKEKSR 521
+ D+D + D ++SDVAEE+DS+ P+ D +E +D +E + K+K++
Sbjct: 481 MGSAGDDDEDEDDDFQSGSDSDVAEEFDSDAAPSSDDDEEMADNNETDDRPPKKKAK 537
>gi|430813279|emb|CCJ29353.1| unnamed protein product [Pneumocystis jirovecii]
Length = 523
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 294/543 (54%), Gaps = 51/543 (9%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M+E +++ ++ G+L++ + +K + + ++ D+ W + +
Sbjct: 1 MSEVIQYDDI--HLNQGEIAGRLRLASSGLGWKESNSEEPYIVSASDIRKAQWSRAARGF 58
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ L+NG + GF++ ++D + K F + + ++E S++GWNWG T+F G+ L
Sbjct: 59 ELKLTLRNGGFVQLDGFEDDDLDTLRKTIKKYFDVILEQREHSLKGWNWGKTEFSGSELL 118
Query: 121 FDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP----------------NDEAAESLIEM 163
F+V+N AFEIPL +S +GKNEV++EF + + L+EM
Sbjct: 119 FNVSNKPAFEIPLSSISNTNLSGKNEVSLEFSLFGNESDMGKLENQVVKDATIQDQLVEM 178
Query: 164 RFYIPTNEIAGD------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
RFYIP G + F +++ ++A + +G++I F+++ LTPR YD+
Sbjct: 179 RFYIPGMTTTGSEENSESVNSASVFYETLKDKADIGQVSGESIVSFSDVLFLTPR--YDV 236
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
+++ F +L GKT+DYKI S+ +++F LP D FV+ LDPP++QGQT Y FL +
Sbjct: 237 DMYSLFLRLRGKTYDYKIYYSSFVKLFLLPKPDDMHVVFVMGLDPPLRQGQTEYPFLVIQ 296
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHT 337
F ++E E+EL + E +EKY KL K+ YEV+++I + +RKI P +FR +
Sbjct: 297 FMREEEMEVELNLEDSEFQEKYSEKLKKKYDQLAYEVVSQIFYGLTSRKIITPSTFRSYR 356
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEI 394
+AV CS KA+ G ++ L+R F+FI KP I I EI+ V +R S ++R+FD
Sbjct: 357 DHAAVKCSMKASEGNLFCLDRSFLFIPKPSIWIPMSEISHVTLSRINTSLSASRTFDLTF 416
Query: 395 ELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK GV + FS+I +EE L DFI+ K +++KN D + A L
Sbjct: 417 SLKGGVYYQFSNINREEQKLLEDFIKSKNIKIKN----------------DLNDDSQAIL 460
Query: 455 ARVKREAAERDDE-DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTK 513
+ E ++ D D+ ES D+DF +++SDVAEEYD N +S +DS +G K
Sbjct: 461 TALDDELSDDDHSIPISDDGESPDDDFEA-ESDSDVAEEYDEN---VESSKDSGEEDGPK 516
Query: 514 KKK 516
KK
Sbjct: 517 SKK 519
>gi|353235652|emb|CCA67662.1| probable POB3-protein that binds to DNA polymerase I
[Piriformospora indica DSM 11827]
Length = 567
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 287/553 (51%), Gaps = 23/553 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKN-GSLHRFAGFKE 79
G+L+I I +K + K + +L + W ++ + LRI LK+ F GF+
Sbjct: 15 GRLRIGATGISWKVLEGDKRVNVPASELKWAEWTRVARNYQLRIGLKDTWKRESFEGFRR 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D + S K NF I++ +ELS RGWNWG T F G L F + N AF+IPL V+
Sbjct: 75 EDQDTLTSLLKQNFDINLEVRELSWRGWNWGSTDFRGQDLVFLIGNKPAFDIPLPTVANS 134
Query: 140 -TTGKNEVTVEFHPND------EAAESLIEMRFYIPTNEIAGDTD------PVEAFKDSV 186
GK EV++EF D A + L+E+R YIP + D D + F +++
Sbjct: 135 NIAGKTEVSLEFIQPDVKRSAKNAPDELMELRMYIPGTQQKDDGDEGDEQSAAQVFHETI 194
Query: 187 MNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTL 246
+A + TG++I VF+E+ TPRGRYDI +F +F +LHGKT+DYK+P +T+ R+F L
Sbjct: 195 KEKADIGQVTGESIVVFHEVLVTTPRGRYDIHMFPNFLRLHGKTYDYKVPYNTISRLFLL 254
Query: 247 PHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKE 306
P D + V++LDPPI+QGQTRY FL L+FN+DE EL E+ L+ KYEG+LDK
Sbjct: 255 PRADEQNISLVVNLDPPIRQGQTRYPFLVLVFNRDEQMAAELNIDEETLQTKYEGRLDKS 314
Query: 307 LSGPTYEVMAKIMKVIVNRKITVPGSF---RGHTGTSAVTCSYKAAAGYIYPLERGFIFI 363
G Y+++A + + +V + I P S + H + C+ KA G +Y LE+ F+
Sbjct: 315 HDGLAYQIIANVYRSLVGKNIARPSSAFAPQSHDPGHPIKCNLKAVQGELYFLEKSIFFL 374
Query: 364 HKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIR 420
K P I ++ + R GG S ++ D IE K G TFSSI+K E + DF+
Sbjct: 375 SKQPYLINISDVYEIVLTRIGGGLASGKTIDLRIEPKGGSEVTFSSIDKGEKDHIEDFLT 434
Query: 421 EKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDE-STDED 479
K +RVK E +D + + V + A DDED E ST ++
Sbjct: 435 SKGVRVKTEAADEAMAVDLGSDDDEDMESDRSVEEDVPKPRAPGGGGDDEDSSEASTSDE 494
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDE--DSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
+P + D E D++ +P + D+ AS KK K + ++ K K D
Sbjct: 495 GSPTSSSDDSEEGSDASDSPVKKKKKRDNSASPSPKKSKSDGTKPKPKPKPKVSADKDDS 554
Query: 538 ESSGGSTKRKKKD 550
+ G + K+K+ D
Sbjct: 555 DGEGPAKKKKRVD 567
>gi|365986070|ref|XP_003669867.1| hypothetical protein NDAI_0D03100 [Naumovozyma dairenensis CBS 421]
gi|343768636|emb|CCD24624.1| hypothetical protein NDAI_0D03100 [Naumovozyma dairenensis CBS 421]
Length = 543
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 277/539 (51%), Gaps = 56/539 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQ--------INGPDLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G + +L + W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKASASGGSASNKAKAPFLLPATELSTIQWSRACRGYELKINTKNQGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I S F F I + KE S+RGWNWG T N L F +N FE+P
Sbjct: 77 QLDGFSQDDFNLIKSEFHHRFSIQIEHKEHSLRGWNWGKTDLARNELIFALNGKPTFEVP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPTNEIAGDTDP--------- 178
++ T KNEV +EF+ +E A + L+EMRFYIP GD +
Sbjct: 137 YSHINNTNLTSKNEVGIEFNIQNEEYQPAGDELVEMRFYIPGTLTTGDEEGEVPKKEEEK 196
Query: 179 ----------------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
EAF + +A + GDAI F ++ TPRGRYDI I+ +
Sbjct: 197 EGEGEDVDMEKEEKSLAEAFYGELREKADIGEVAGDAIVSFQDVFFATPRGRYDIDIYKN 256
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
+L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL L F +DE
Sbjct: 257 SIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQGQTTYPFLVLQFQKDE 316
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAV 342
+E++L + + + Y+ KL K T+ V++ ++K + +R++ VPGS+ AV
Sbjct: 317 ETEVQLNLEDDDYEANYKDKLKKSYDAKTHVVISHVLKGLTDRRVIVPGSYTSKFDQCAV 376
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSG 399
+CSYKA GY+YPL+ F F+ KP ++I F ++++VN +R+G S+R+FD E+ L+
Sbjct: 377 SCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQSSTSSRTFDLEVVLRLN 436
Query: 400 V-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVK 458
TF +I KEE L F++ K LRVKN K + + GS DE + +
Sbjct: 437 RGSTTFGNISKEEQQLLEQFLKSKNLRVKNEEKETQERLQNALGSDSDEGD-------IN 489
Query: 459 REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
+A D DES D DF+ E DVAEE+DS+ +D +E S + E KK K
Sbjct: 490 MGSAGED-------DESEDVDFHASSGEEDVAEEFDSDAPVSDDEEGSGSDERPTKKPK 541
>gi|401841733|gb|EJT44076.1| POB3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 549
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 290/547 (53%), Gaps = 63/547 (11%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L + W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKVSTSGGSAANQARKPFLLPATELSTIQWSRGCRGYELKISTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP----TN---------EIAG 174
++ T KNEV +EF+ DE A + L+EMRFYIP TN E +
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEESSD 196
Query: 175 DTDP-----------------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
+ P EAF + + +A + GDAI F ++ TPRGRYDI
Sbjct: 197 EVMPKKEDGEDVETAIEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDI 256
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL L
Sbjct: 257 DVYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFLVLQ 316
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHT 337
F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + R++ VPG ++
Sbjct: 317 FQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVLKGLTGRRVIVPGEYKSKY 376
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEI 394
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD E+
Sbjct: 377 DQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFGDVSMVNISRAGQTSTSSRTFDLEV 436
Query: 395 ELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
L+S TF++I KEE L F++ K LRVKN + + + GS DE++
Sbjct: 437 VLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNEDREVQERLQTALGSDSDEED---- 492
Query: 454 LARVKREAAERDDEDDEDEDESTDEDF--NPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
V +A D DES DEDF + D DVAEE+DS+ +D+++ SD
Sbjct: 493 ---VNMGSAGED-------DESVDEDFQVSSDNDAEDVAEEFDSDAVLSDAEKGSDEERP 542
Query: 512 TKKKKKE 518
+KK K E
Sbjct: 543 SKKPKVE 549
>gi|365759130|gb|EHN00937.1| Pob3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 549
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 290/547 (53%), Gaps = 63/547 (11%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L + W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKVSTSGGSAANQARKPFLLPATELSTIQWSRGCRGYELKISTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP----TN---------EIAG 174
++ T KNEV +EF+ DE A + L+EMRFYIP TN E +
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEESSD 196
Query: 175 DTDP-----------------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
+ P EAF + + +A + GDAI F ++ TPRGRYDI
Sbjct: 197 EVMPKKEDGEGVETAIEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDI 256
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL L
Sbjct: 257 DVYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFLVLQ 316
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHT 337
F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + R++ VPG ++
Sbjct: 317 FQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVLKGLTGRRVIVPGEYKSKY 376
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEI 394
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD E+
Sbjct: 377 DQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFGDVSMVNISRAGQTSTSSRTFDLEV 436
Query: 395 ELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
L+S TF++I KEE L F++ K LRVKN + + + GS DE++
Sbjct: 437 VLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNEDREVQERLQTALGSDSDEED---- 492
Query: 454 LARVKREAAERDDEDDEDEDESTDEDF--NPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
V +A D DES DEDF + D DVAEE+DS+ +D+++ SD
Sbjct: 493 ---VNMGSAGED-------DESVDEDFQVSSDNDAEDVAEEFDSDAVLSDAEKGSDEERP 542
Query: 512 TKKKKKE 518
+KK K E
Sbjct: 543 SKKPKVE 549
>gi|349806433|gb|AEQ18689.1| putative ssrp1 protein [Hymenochirus curtipes]
Length = 280
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 215/318 (67%), Gaps = 41/318 (12%)
Query: 307 LSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKP 366
+SG YE+++++MK +VNRKITVPG+F+GH+G+ +TCSYKA++G +YPLERGFI++HKP
Sbjct: 1 MSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFIYVHKP 60
Query: 367 PIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
P+H+RF+E+ VNFAR +TRSFDFEIE K G +TFSSIE+EEYGKLFDF+ KKL +
Sbjct: 61 PVHLRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNAKKLSI 120
Query: 427 KNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQ 484
KN G +G KP Y +D+ SD+++ DAYL R+K E R++ D +D E TDE FNP +
Sbjct: 121 KNRGLKEGMKPAY-DDYADSDEDQH-DAYLERMKEEGKIRENADSDDTGE-TDESFNPGE 177
Query: 485 AESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGST 544
E +VA E + I +KPRK+++ K +
Sbjct: 178 EEDEVA---------------------------EAKKAKIVKEKKPRKNQESKNN----- 205
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
KD +APK+PMSAYM W N REKIK +NPGIS T+++KK GE+WK+++ ++K E+D
Sbjct: 206 ----KDPSAPKRPMSAYMPWLNASREKIKGENPGISITDLSKKAGEIWKSMNREKKEEWD 261
Query: 605 EKVNKAKEDYNEALKAYK 622
+ +AK DY +A+K YK
Sbjct: 262 RRAEEAKRDYEKAMKEYK 279
>gi|281212084|gb|EFA86245.1| structure-specific recognition protein 1 [Polysphondylium pallidum
PN500]
Length = 518
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 266/448 (59%), Gaps = 30/448 (6%)
Query: 6 EFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLV-GTWALRI 64
+F +S R G LKI + +K++ G+ E + D+ +W ++ + L +
Sbjct: 19 QFNHISLGGRIGGTRGVLKINVSGLAWKSE-AGRSETVTSEDIQNASWIRVTPKLYQLNL 77
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+K G+ +F GF+E + D + F N+KI++ KELS +G N+G K +++SF ++
Sbjct: 78 AVKGGTQVKFDGFREQDYDFLKKFISENYKIELAVKELSTKGSNFGIAKVTSSMVSFQID 137
Query: 125 NTTAFEIPLRDVSQCTTG---KNEVTVEFHPN---DEAAESLIEMRFYIPTNEIA-GDT- 176
TAFE P+ DVSQ KNE+T+EF + DE ES++E+RF+ PT + GD
Sbjct: 138 KKTAFEFPISDVSQSIINANNKNELTIEFLHDSTLDEVDESIVELRFFAPTRQTKEGDEH 197
Query: 177 ----DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFD 232
DP++ F+D+++ ++ + N G +I V N+I LTPRGR+DI+++ +F +LHGKT D
Sbjct: 198 EETDDPIQDFQDTLLRKSDISNV-GKSIVVLNDIHFLTPRGRFDIEMYPTFLRLHGKTHD 256
Query: 233 YKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD------ETSEM 286
YK+ T+ ++F LP +D FFVISLDPP++QG+T+Y+ L + ++D + +
Sbjct: 257 YKVSYDTISKLFQLPRQDQSHMFFVISLDPPVRQGKTKYNHLVIQLSKDTQLSKENNNVL 316
Query: 287 ELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSY 346
L S E +EKY+ KL + G Y ++ +I+ + KI VPG+F+ ++++ CS
Sbjct: 317 HLNLSP-EAEEKYKEKLSPTMEGTLYVIVRRILTSLTENKIIVPGNFQSCNQSNSIKCSL 375
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARS--------GGSTRSFDFEIELKS 398
KA GY+YPL+R F FIHKPP I++ +I V F+R+ ++R+FD I LK
Sbjct: 376 KANEGYLYPLDRSFFFIHKPPTLIKYTDIQIVEFSRAPVAFGSRNTSNSRTFDLNITLKD 435
Query: 399 GVLHTFSSIEKEEYGKLFDFIREKKLRV 426
F++I KEEY LF+FI+ K++++
Sbjct: 436 STTIQFTNILKEEYSLLFNFIQNKQIKI 463
>gi|425773481|gb|EKV11833.1| Structure-specific recognition protein, putative [Penicillium
digitatum Pd1]
Length = 633
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 282/545 (51%), Gaps = 68/545 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ +W + + L+I ++ + + GF +
Sbjct: 86 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAHWSRAAKGFELKILSRSSGVIQLDGFDQ 145
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+++++ FK + I+V +E ++RGWNWG KF L+F+V N AFE+P ++S
Sbjct: 146 EDLERLSKAFKIWYGINVETREHALRGWNWGKAKFTKAELAFNVQNRPAFEVPYSEISNT 205
Query: 140 T-TGKNEVTVEFH-----PND----------------EAAESLIEMRFYIPTNEI----- 172
G+NEV VEF ND + L+EMRFYIP +
Sbjct: 206 NLAGRNEVAVEFSLPAGDGNDVVTKPGSTKNRGRKAAAGPDELVEMRFYIPGTAMKKEKV 265
Query: 173 -------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ + F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 266 EGAEDEEEDNEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 325
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI S + + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 326 YESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVMQLK 385
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTG 338
DE +E+ +E L +Y+ +L P ++V+ K+ + + +K+ +P F H G
Sbjct: 386 LDEEISLEMNMTEDILNSQYKDRLQAHYEEPIHQVVTKVFRGLSGKKVIMPSRDFSSHHG 445
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
V CS KA G +Y L++ +F+ KP +I+ E IA V +R GG ++R+FD +
Sbjct: 446 HQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQMENIAIVTMSRVGGAVSASRTFDITVS 505
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEK 448
LK G+ H FS+I +EE L DF + K +R+KN E + GSSDDE
Sbjct: 506 LKGGLGEHQFSNINREEQKSLEDFFKAKGIRIKNEMAEEAAGLIAAALDNDAMGSSDDEV 565
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS-NPTPTDSDEDS- 506
PD R +A DEDE S DEDF ++SDVAEE+DS + + DSDED
Sbjct: 566 RPD-------RGSA------DEDE-SSIDEDF-AGSSDSDVAEEFDSDHESSGDSDEDMD 610
Query: 507 DASEG 511
DAS+G
Sbjct: 611 DASDG 615
>gi|6323571|ref|NP_013642.1| Pob3p [Saccharomyces cerevisiae S288c]
gi|2497082|sp|Q04636.1|POB3_YEAST RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|558405|emb|CAA86251.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946095|gb|EDN64326.1| DNA polymerase delta binding protein [Saccharomyces cerevisiae
YJM789]
gi|190408174|gb|EDV11439.1| DNA polymerase delta binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|207342538|gb|EDZ70274.1| YML069Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269746|gb|EEU05013.1| Pob3p [Saccharomyces cerevisiae JAY291]
gi|259148507|emb|CAY81752.1| Pob3p [Saccharomyces cerevisiae EC1118]
gi|285813933|tpg|DAA09828.1| TPA: Pob3p [Saccharomyces cerevisiae S288c]
gi|323307812|gb|EGA61074.1| Pob3p [Saccharomyces cerevisiae FostersO]
gi|323352957|gb|EGA85257.1| Pob3p [Saccharomyces cerevisiae VL3]
gi|349580219|dbj|GAA25379.1| K7_Pob3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297513|gb|EIW08613.1| Pob3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 552
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 289/550 (52%), Gaps = 66/550 (12%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGCRGYDLKINTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP-----------------TN 170
++ T KNEV +EF+ DE A + L+EMRFYIP +N
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEESSN 196
Query: 171 EIAG----------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
E+ + EAF + + +A + GDAI F ++ TPRGR
Sbjct: 197 EVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGR 256
Query: 215 YDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFL 274
YDI I+ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL
Sbjct: 257 YDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFL 316
Query: 275 TLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFR 334
L F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + +R++ VPG ++
Sbjct: 317 VLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYK 376
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFD 391
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD
Sbjct: 377 SKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFD 436
Query: 392 FEIELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
E+ L+S TF++I KEE L F++ K LRVKN + + + GS DE++
Sbjct: 437 LEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNEDREVQERLQTALGSDSDEED- 495
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDF--NPDQAESDVAEEYDSNPTPTDSDEDSDA 508
+ +A D DES DEDF + D +VAEE+DS+ +D++ SD
Sbjct: 496 ------INMGSAGED-------DESVDEDFQVSSDNDADEVAEEFDSDAALSDAEGGSDE 542
Query: 509 SEGTKKKKKE 518
+KK K E
Sbjct: 543 ERPSKKPKVE 552
>gi|323336172|gb|EGA77443.1| Pob3p [Saccharomyces cerevisiae Vin13]
gi|365763685|gb|EHN05211.1| Pob3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 552
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 289/550 (52%), Gaps = 66/550 (12%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGCRGYDLKINTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDXNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP-----------------TN 170
++ T KNEV +EF+ DE A + L+EMRFYIP +N
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEESSN 196
Query: 171 EIAG----------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
E+ + EAF + + +A + GDAI F ++ TPRGR
Sbjct: 197 EVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGR 256
Query: 215 YDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFL 274
YDI I+ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL
Sbjct: 257 YDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFL 316
Query: 275 TLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFR 334
L F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + +R++ VPG ++
Sbjct: 317 VLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYK 376
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFD 391
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD
Sbjct: 377 SKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFD 436
Query: 392 FEIELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
E+ L+S TF++I KEE L F++ K LRVKN + + + GS DE++
Sbjct: 437 LEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNEDREVQERLQTALGSDSDEED- 495
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDF--NPDQAESDVAEEYDSNPTPTDSDEDSDA 508
+ +A D DES DEDF + D +VAEE+DS+ +D++ SD
Sbjct: 496 ------INMGSAGED-------DESVDEDFQVSSDNDADEVAEEFDSDAALSDAEGGSDE 542
Query: 509 SEGTKKKKKE 518
+KK K E
Sbjct: 543 ERPSKKPKVE 552
>gi|406608003|emb|CCH40630.1| FACT complex subunit [Wickerhamomyces ciferrii]
Length = 523
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 288/534 (53%), Gaps = 50/534 (9%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGP------DLDFVNWQ 54
M+ L+F+++ A G+ +I + + +K G P +L W
Sbjct: 1 MSGNLDFEKIYLNQSKAF--GRFRIAETGLGWKAAAAGGSANKTQPFLLPSEELSSAQWS 58
Query: 55 KLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF 114
+ + ++I KN + + GF + + +++ + + F I + +E S+RGWNWG T
Sbjct: 59 RGSRGYEIKIQTKNKGVVKLDGFDQQDFNQLKNGLQ-QFNIQLDHREHSLRGWNWGNTDL 117
Query: 115 IGNVLSFDVNNTTAFEIPLRDVSQCTTG-KNEVTVEFHP---NDEAAESLIEMRFYIPTN 170
N L F+V+ AFEIP +S KNEV ++ P ND A + L+E+RFY+P N
Sbjct: 118 ARNELIFNVSGKPAFEIPYAQISNSNLASKNEVAIDMDPLQGNDFAGDELVEVRFYVPGN 177
Query: 171 EIAGDTDPVE----------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
D D E AF +++ ++A + G+A+A FN+I LTPRGR+D++++
Sbjct: 178 VPYEDDDVPEDDKEEKTAASAFYENLKDKADIGQVAGEALASFNDILFLTPRGRFDVEMY 237
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+L GKT+D+KI V R+F+LP D + VI ++PP++QG T Y FL L F++
Sbjct: 238 RGSLRLRGKTYDHKIQYRQVERIFSLPKPDDIHHLMVIQVNPPLRQGNTPYPFLVLQFSK 297
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTS 340
DE E+E+ + E +EKY +L+K T+ V++ + + + R++ +PGSF G
Sbjct: 298 DEELELEINIDDDEFQEKYSKRLNKNYDQQTHLVLSHVFRGLTERRVIIPGSFLSKHGQP 357
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELK 397
AV+CS K GY+Y LE F+F+ KP ++I + ++++V+ +R+G S+ R+FD E+ L+
Sbjct: 358 AVSCSLKVNEGYLYLLENNFLFVTKPTVYIPYNDVSSVSISRAGDSSTSNRTFDLEVNLR 417
Query: 398 -SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLAR 456
S V HTF++I KEE L F++ K ++VKN DE E A +
Sbjct: 418 GSPVSHTFANITKEEQNSLESFLKSKGVKVKN-----------------DEIEQQARINA 460
Query: 457 VKREAAERDDED----DEDEDESTDEDFN--PDQAESDVAEEYDSNPTPTDSDE 504
V + D D EDES DEDFN ++SD+AEE+DS+ +D DE
Sbjct: 461 VLANDLDSSDSDVNMGSASEDESPDEDFNDGGSGSDSDLAEEFDSDAPLSDDDE 514
>gi|452846982|gb|EME48914.1| hypothetical protein DOTSEDRAFT_67841 [Dothistroma septosporum
NZE10]
Length = 568
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 285/563 (50%), Gaps = 59/563 (10%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK ++ + I +K G+ ++ DL W + L+I+ N + + GFKE
Sbjct: 16 PGKCRLAESGIGWKPTSGGQTFTLDKSDLQSAQWSRAARGHELKIYAGNEGVVQLDGFKE 75
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D I FK + + KE ++RGWNWG + N L F+V N AFEIP ++S
Sbjct: 76 DDFDTIAKCFKVWYGAGLEHKEHALRGWNWGKNELGRNELVFNVRNQPAFEIPYTEISNT 135
Query: 140 T-TGKNEVTVEFH--PNDE--------------------AAESLIEMRFYIPTNE----- 171
GKNEV VEF N E A + L EMRFYIP E
Sbjct: 136 NLAGKNEVAVEFSLPENGEETGTNGSLGGARSKGRKMGGAVDQLTEMRFYIPGTEKIHRG 195
Query: 172 --------IAGDTD----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
G+ D F +++MN+A + GD A F ++ LTPRGR+DI +
Sbjct: 196 EEGEDGEKADGEEDEEQNAANFFYETLMNKAEIGEVAGDTFATFQDVLHLTPRGRFDIDL 255
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ + F+L GKT+DYKI + R F LP D I LDPP++QGQTRY FL + F
Sbjct: 256 YENSFRLRGKTYDYKISYESAKRFFILPKPDDMHQLLCIGLDPPLRQGQTRYPFLVMQFK 315
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTG 338
+DE ++EL + + LKEKY GKL P V++KI + +++ P + F H
Sbjct: 316 KDEEVKIELNMTPEVLKEKYNGKLLPMYEEPVGRVVSKIFHGLTGKRLIQPSADFTSHHQ 375
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
S V CS KA G+++ L+R F+F+ KP +I F+ IA+V +R GG ++R+FD +
Sbjct: 376 MSGVKCSIKANEGHLFCLDRAFLFVPKPATYISFDHIASVTMSRVGGAVSASRTFDISVT 435
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK+G H FS+I +EE L F + K ++ KN G+ +DD PD L
Sbjct: 436 LKNGAGEHQFSNINREEQSPLESFFKIKNIKTKNEMDGDGGMLAAAL--ADD---PD--L 488
Query: 455 ARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPT--DSDEDSDASEGT 512
A E +D +++ E DEDF D +ESDVAEE+DS+ + DSD + D +EG
Sbjct: 489 ASSDEEVVMQDRGSADEDSEEADEDFAAD-SESDVAEEFDSDAKSSGDDSDAEMDDAEGA 547
Query: 513 KKKKKEKSRKTITISEKPRKSKK 535
+ + K E+P+K K
Sbjct: 548 AGSGSDTAEKV----ERPKKKAK 566
>gi|401624461|gb|EJS42518.1| pob3p [Saccharomyces arboricola H-6]
Length = 552
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 291/550 (52%), Gaps = 66/550 (12%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L + W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKVSTSGGSAANQARKPFLLPATELSTIQWSRGCRGYELKISTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP----TN------------- 170
++ T KNEV +EF+ DE A + L+EMRFYIP TN
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEEPSD 196
Query: 171 ------EIAGDTDPVEA----------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
E + + VEA F + + +A + GDAI F ++ TPRGR
Sbjct: 197 GVMRKKEDGAEGESVEAAVEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGR 256
Query: 215 YDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFL 274
YDI I+ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL
Sbjct: 257 YDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFL 316
Query: 275 TLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFR 334
L F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + +R++ VPG ++
Sbjct: 317 VLQFQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYK 376
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFD 391
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD
Sbjct: 377 SKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFD 436
Query: 392 FEIELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
E+ L+S TF++I KEE L F++ K LRVKN + + + GS DE++
Sbjct: 437 LEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNEDRDVQERLQTALGSDSDEED- 495
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDF--NPDQAESDVAEEYDSNPTPTDSDEDSDA 508
+ +A D DES DEDF + D +VAEE+DS+ ++++E SD
Sbjct: 496 ------INMGSAGED-------DESVDEDFQVSSDNDAEEVAEEFDSDAALSNAEEGSDE 542
Query: 509 SEGTKKKKKE 518
+KK K E
Sbjct: 543 ERPSKKPKVE 552
>gi|330804649|ref|XP_003290305.1| hypothetical protein DICPUDRAFT_95110 [Dictyostelium purpureum]
gi|325079592|gb|EGC33185.1| hypothetical protein DICPUDRAFT_95110 [Dictyostelium purpureum]
Length = 537
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 271/475 (57%), Gaps = 53/475 (11%)
Query: 4 ALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG-TWAL 62
L+F +S + G LK+T + +K++ GK E I D+ NW ++ + L
Sbjct: 8 ILQFNNISLGGKVGGKRGILKLTQTGLGWKSEG-GKNEAITPSDIRKANWIRVTPRVFQL 66
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
I +K G+ +F GF+E + + I F N+ + + ELS +G NWG K G ++ F
Sbjct: 67 NILIKGGANIKFDGFREQDYESIRKFVLENYSQTLEQLELSTKGCNWGEVKVNGPMIQFV 126
Query: 123 VN-NTTAFEIPLRDVSQCTTG---KNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGD 175
N N FE P+ +VSQ KNE+T+EFH ++ ES++EMRF+ PT + D
Sbjct: 127 SNDNKIGFEFPISEVSQSVINQNNKNELTLEFHHDNTLDFDDESIVEMRFFAPTRPVKED 186
Query: 176 -----------------------------------TDPVEAFKDSVMNQASVINATGDAI 200
P+E F+ ++MN++ +++ G ++
Sbjct: 187 EQKEKKEKEKKEGQEGENEDEEEEEEEDEEDEDEELTPIEIFQQTIMNKSDMVSNVGKSL 246
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
VF+ IQ LTPRGR DI+++ +F +LHGKT DYK+P ++ R+F +D + FF+ISL
Sbjct: 247 VVFSSIQFLTPRGRIDIEMYPTFLKLHGKTHDYKVPYDSISRLFQFDRQDQKHIFFIISL 306
Query: 261 DPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMK 320
+PPI+QG+T+Y L + F ++ET ++EL +E EL++KY+ +L +SG T ++ KI+K
Sbjct: 307 EPPIRQGKTKYAHLVIQFQEEET-QLELNLTE-ELQQKYKDQLLPIMSGNTNSLLYKILK 364
Query: 321 VIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNF 380
+ +K+T PG+F+ + +++ CS KA G++YPLER F F+HKPP +I+FEEI ++ F
Sbjct: 365 TLTGKKLTTPGNFQSNRKLNSIKCSLKANEGFLYPLERSFFFVHKPPTYIKFEEIQSIEF 424
Query: 381 AR-------SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+R GGS R+FD I K+ F++I +EEY LF+++ EKKL + N
Sbjct: 425 SRYDAGPTARGGSNRTFDLTINYKNSTSIQFTNILREEYPNLFNYLNEKKLNILN 479
>gi|354546711|emb|CCE43443.1| hypothetical protein CPAR2_210870 [Candida parapsilosis]
Length = 546
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 275/519 (52%), Gaps = 63/519 (12%)
Query: 21 GKLKITDQNIVFK------NKKTGKVEQ----INGPDLDFVNWQKLVGTWALRIFLKNGS 70
G++++ D + +K N G EQ + ++ W + + LRI KN
Sbjct: 18 GRMRVADSGLGWKASASATNGSAGAPEQQTFLLPREEILVTTWSRGSKGYELRIQTKNKG 77
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ GF + ++ NF +++ KE S+RGWNWG T N L F+VNN +FE
Sbjct: 78 VVSLDGFHPDDFAQLKQELTRNFHVNLEHKEHSLRGWNWGTTDLARNELVFNVNNKPSFE 137
Query: 131 IPLRDVSQCT-TGKNEVTVEFHP---NDEAAESLIEMRFYIPTNEIAGDTDPV------- 179
IP +S TGKNEV +E + N + + ++EMRFY+P I +T V
Sbjct: 138 IPYDSISNSNLTGKNEVAIELNLDKNNTKMGDEVVEMRFYVPGTTIEQETTTVKNEDGEE 197
Query: 180 ---------------EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
+ F + + ++A + G+AI F + LTPRGRYDI ++ S
Sbjct: 198 EQVVSTNMDSEQSAAQTFYEQLKDKADIGQIAGEAIVSFGDALFLTPRGRYDIDMYASSL 257
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT+DYKI + R+F+LP D + ++ +DPP++QGQTRY FL L F +DE +
Sbjct: 258 RLRGKTYDYKIQYDQIERIFSLPKPDEVHHLIILQIDPPLRQGQTRYPFLVLQFVKDEET 317
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTC 344
E+EL S++E +EKY+ +L K PT+ VMA ++ + +K+ +PG+F+ ++C
Sbjct: 318 ELELNLSDEEFEEKYKNRLKKTYDAPTHIVMAHCLRGLTEKKLVIPGAFQSRFLQPGISC 377
Query: 345 SYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIEL-KSGV 400
S KA+ GY+YPLER F+F+ KP ++I + EI+ V +R+GG ++R+FD E+ L S V
Sbjct: 378 SVKASEGYLYPLERCFLFVTKPTLYIPYSEISNVVLSRTGGGVSASRTFDLEVNLIGSSV 437
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKRE 460
H F SI++EE + F EK +RVKN +EK LA+ +
Sbjct: 438 KHVFGSIDREEQENIEKFCVEKGVRVKN-----------------EEKIAKQRLAKALEQ 480
Query: 461 AAERDDEDDEDEDESTDEDFNPDQ------AESDVAEEY 493
AE D +D++ + S ED ++SDVAEE+
Sbjct: 481 EAEMDADDNDVDMGSAGEDDEDADDDFQSGSDSDVAEEF 519
>gi|425775777|gb|EKV14029.1| Structure-specific recognition protein, putative [Penicillium
digitatum PHI26]
Length = 633
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 282/545 (51%), Gaps = 68/545 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ +W + + L+I ++ + + GF +
Sbjct: 86 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAHWSRAAKGFELKILSRSSGVIQLDGFDQ 145
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+++++ FK + I+V +E ++RGWNWG +F L+F+V N AFE+P ++S
Sbjct: 146 EDLERLSKAFKIWYGINVETREHALRGWNWGKAEFTKAELAFNVQNRPAFEVPYSEISNT 205
Query: 140 T-TGKNEVTVEFH-----PND----------------EAAESLIEMRFYIPTNEI----- 172
G+NEV VEF ND + L+EMRFYIP +
Sbjct: 206 NLAGRNEVAVEFSLPAGDGNDVVTKPGSTKNRGRKAAAGPDELVEMRFYIPGTAMKKEKV 265
Query: 173 -------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ + F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 266 EGAEDEEEDNEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 325
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI S + + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 326 YESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVMQLK 385
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTG 338
DE +E+ +E L +Y+ +L P ++V+ K+ + + +K+ +P F H G
Sbjct: 386 LDEEISLEMNMTEDILNSQYKDRLQAHYEEPIHQVVTKVFRGLSGKKVIMPSRDFSSHHG 445
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
V CS KA G +Y L++ +F+ KP +I+ E IA V +R GG ++R+FD +
Sbjct: 446 HQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQMENIAIVTMSRVGGAVSASRTFDITVS 505
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEK 448
LK G+ H FS+I +EE L DF + K +R+KN E + GSSDDE
Sbjct: 506 LKGGLGEHQFSNINREEQKSLEDFFKAKGIRIKNEMAEEAAGLIAAALDNDAMGSSDDEV 565
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS-NPTPTDSDEDS- 506
PD R +A DEDE S DEDF ++SDVAEE+DS + + DSDED
Sbjct: 566 RPD-------RGSA------DEDE-SSIDEDF-AGSSDSDVAEEFDSDHESSGDSDEDMD 610
Query: 507 DASEG 511
DAS+G
Sbjct: 611 DASDG 615
>gi|363748000|ref|XP_003644218.1| hypothetical protein Ecym_1149 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887850|gb|AET37401.1| hypothetical protein Ecym_1149 [Eremothecium cymbalariae
DBVPG#7215]
Length = 538
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 291/534 (54%), Gaps = 51/534 (9%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ ++ + + +K TG Q N P +L V W + + L+I KN +
Sbjct: 17 GRFRLGEGGLGWKASATGGSASTQNNEPVLLTPDELASVQWSRGCRGYELKISTKNKGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + + + F + + KE S+RGWNWG + N L +N FEIP
Sbjct: 77 QLDGFSQEDFTLLKNDLQRRFSVQLEHKEHSLRGWNWGTSDLTRNELILSLNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPT--------------NEIA 173
+S T KNEV VEF + A + L+EMRFY+P ++I
Sbjct: 137 YSHISNTNLTSKNEVAVEFDLQTDSYNPAGDELVEMRFYLPGFVSQEDRHTPGATDDDIE 196
Query: 174 GDTDP------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
GD + EAF + + +A + +GDAI F+++ TPRGRYDI I+ + +L
Sbjct: 197 GDKESKAEKSIAEAFYEELKAKADIGEVSGDAIISFHDVFFTTPRGRYDIDIYKNSIRLR 256
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT++YK+ + R+F+LP D + V+S++PP++QGQT Y +L L F +DE +E++
Sbjct: 257 GKTYEYKLQQRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTSYPYLVLQFQKDEETEVQ 316
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYK 347
L + E ++ Y+ L K+ T+ V++ ++K + +R++ VPG ++ AV+CS+K
Sbjct: 317 LNVEDDEFEKLYKDNLKKQYDAKTHIVLSHVLKGLTDRRVVVPGEYKSKYEQCAVSCSFK 376
Query: 348 AAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHT 403
A G++YPL+ F+F+ KP ++I F+++++VN +R+G S+R+FD E+ L+S T
Sbjct: 377 ANEGHLYPLDNAFMFLTKPTLYIPFQDVSSVNISRAGQTTASSRTFDLEVILRSNRGATT 436
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
F++I KEE L F++ K +RVKN K + + GS D ++ D + AAE
Sbjct: 437 FANISKEEQQLLESFLKSKNVRVKNEEKETQHRLQTALGS--DSEDEDVNMG----SAAE 490
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
+DES DEDF + + DVAEE+DS+ +D +E+S + + K+ K
Sbjct: 491 --------DDESVDEDFQAESEDDDVAEEFDSDLGGSDHNEESSGDDRSSKRPK 536
>gi|68466813|ref|XP_722602.1| hypothetical protein CaO19.1560 [Candida albicans SC5314]
gi|68467092|ref|XP_722461.1| hypothetical protein CaO19.9133 [Candida albicans SC5314]
gi|74587618|sp|Q5ALL8.1|POB3_CANAL RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|46444439|gb|EAL03714.1| hypothetical protein CaO19.9133 [Candida albicans SC5314]
gi|46444589|gb|EAL03863.1| hypothetical protein CaO19.1560 [Candida albicans SC5314]
Length = 538
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 303/537 (56%), Gaps = 53/537 (9%)
Query: 21 GKLKITDQNIVFK-NKKTGKVEQ---INGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAG 76
G+++I + + +K + +G Q + ++ +W + + LR+ KN + G
Sbjct: 18 GRMRIAESGLGWKASASSGSTSQPFLLPREEILIASWSRGSKGYELRVQTKNKGVVSLDG 77
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F + ++ NF I++ +E S+RGWNWG T N L F+VNN AFEIP D+
Sbjct: 78 FDHDDFTQLKQELTRNFHINLEHREHSLRGWNWGKTDLARNELIFNVNNKPAFEIPYSDI 137
Query: 137 SQCT-TGKNEVTVEFHP-NDEAAESLIEMRFYIPT----------NEIAGD--------- 175
S TGKNEV +EF+ N++ + ++EMRFY+P NE GD
Sbjct: 138 SNSNLTGKNEVALEFNLDNNKNGDEIVEMRFYVPGTIENETTIVKNETNGDVIEEAVVNE 197
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
T + F + + ++A + G+AI F+++ LTPRGRYDI ++ S +L GKT+DYKI
Sbjct: 198 TSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPSSLRLRGKTYDYKI 257
Query: 236 PISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
+ R+F+LP D + V+ +DPP++QGQTRY FL L F +DE +E+EL S+++
Sbjct: 258 QYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFLVLQFVKDEETELELNVSDEDF 317
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
++KY+ +L K PT VM+ ++ + RK+ PG+F+ + V CS KA+ GY++P
Sbjct: 318 EKKYKDRLKKTYDAPTNVVMSHCLRGLTERKLITPGAFQSRYLQAGVPCSVKASEGYLFP 377
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE-LKSGVLHTFSSIEKEE 411
L+R F+F+ KP ++I + EI++V +R+GG ++R+FD E+ + S H FS+I++EE
Sbjct: 378 LDRCFLFVTKPTLYIPYSEISSVVMSRTGGGVSASRTFDLEVNVIGSNQPHVFSNIDREE 437
Query: 412 YGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED 471
+ F +EK ++VKN +EK A LA+ + A DD++D D
Sbjct: 438 QEFIESFCKEKGVKVKN-----------------EEKIAKARLAKALEQEANDDDDEDAD 480
Query: 472 EDESTDEDFNPDQ-----AESDVAEEYDSNPTPT--DSDEDSDASEGTKKKKKEKSR 521
+ DED + D ++SDVAEE+DS+ P+ D +E +D+ E + K+K++
Sbjct: 481 MGSAGDEDEDEDVDFQSGSDSDVAEEFDSDAAPSSDDDEEMADSKETDDRPPKKKAK 537
>gi|238882037|gb|EEQ45675.1| hypothetical protein CAWG_04006 [Candida albicans WO-1]
Length = 538
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 303/537 (56%), Gaps = 53/537 (9%)
Query: 21 GKLKITDQNIVFK-NKKTGKVEQ---INGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAG 76
G+++I + + +K + +G Q + ++ +W + + LR+ KN + G
Sbjct: 18 GRMRIAESGLGWKASASSGSTSQPFLLPREEILIASWSRGSKGYELRVQTKNKGVVSLDG 77
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F + ++ NF I++ +E S+RGWNWG T N L F+VNN AFEIP D+
Sbjct: 78 FDHDDFTQLKQELTRNFHINLEHREHSLRGWNWGKTYLARNELIFNVNNKPAFEIPYSDI 137
Query: 137 SQCT-TGKNEVTVEFHP-NDEAAESLIEMRFYIPT----------NEIAGD--------- 175
S TGKNEV +EF+ N++ + ++EMRFY+P NE GD
Sbjct: 138 SNSNLTGKNEVALEFNLDNNKNGDEIVEMRFYVPGTIENETTIVKNETNGDVVEEAIVNE 197
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
T + F + + ++A + G+AI F+++ LTPRGRYDI ++ S +L GKT+DYKI
Sbjct: 198 TSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPSSLRLRGKTYDYKI 257
Query: 236 PISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
+ R+F+LP D + V+ +DPP++QGQTRY FL L F +DE +E+EL S+++
Sbjct: 258 QYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFLVLQFVKDEETELELNVSDEDF 317
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
++KY+ +L K PT VM+ ++ + RK+ PG+F+ + V CS KA+ GY++P
Sbjct: 318 EKKYKDRLKKTYDAPTNVVMSHCLRGLTERKLITPGAFQSRYLQAGVPCSVKASEGYLFP 377
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE-LKSGVLHTFSSIEKEE 411
L+R F+F+ KP ++I + EI++V +R+GG ++R+FD E+ + S H FS+I++EE
Sbjct: 378 LDRCFLFVTKPTLYIPYSEISSVVMSRTGGGVSASRTFDLEVNVIGSNQPHVFSNIDREE 437
Query: 412 YGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDED 471
+ F +EK ++VKN +EK A LA+ + A DD++D D
Sbjct: 438 QEFIESFCKEKGVKVKN-----------------EEKIAKARLAKALEQEANDDDDEDAD 480
Query: 472 EDESTDEDFNPDQ-----AESDVAEEYDSNPTPT--DSDEDSDASEGTKKKKKEKSR 521
+ DED + D ++SDVAEE+DS+ P+ D +E +D+ E + K+K++
Sbjct: 481 MGSAGDEDEDEDVDFQSGSDSDVAEEFDSDAAPSSDDDEEMADSKETDDRPPKKKAK 537
>gi|347839745|emb|CCD54317.1| similar to FACT complex subunit pob3 [Botryotinia fuckeliana]
Length = 555
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 285/549 (51%), Gaps = 61/549 (11%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+ + + +K G + ++ W K + +++ L+NG + + GF +
Sbjct: 18 GRCRFAETGFGWKPSSGGDTFTLESSNIAGAQWSKAAKGFEVKLLLRNGDICQLDGFLQD 77
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE ++RGWNWG +F + L F+V N AFEIP ++S
Sbjct: 78 DFERLSKVFKNWYSTNLEHKEHALRGWNWGKGEFGKSELVFNVQNRPAFEIPYTEISNTN 137
Query: 141 -TGKNEVTVEFHPNDE---------------------AAESLIEMRFYIPTN-------- 170
GKNEV VEF P + + L+EMRFYIP
Sbjct: 138 LAGKNEVAVEFTPGNADDTGTNGALGGARAKGKKSGAGKDQLVEMRFYIPGTAPKKGARE 197
Query: 171 --EIAGD------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
E +GD T+ F D++M +A + + GD +A F ++ LTPRGR+DI ++ S
Sbjct: 198 GEEDSGDEADGEETNASTIFYDTLMEKAEIGDVAGDTVATFLDVLHLTPRGRFDIDMYES 257
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI + + LP D I LDPP++QGQTRY FL + F +DE
Sbjct: 258 SFRLRGKTYDYKIQYDNIKKFMVLPKPDELHFMICIGLDPPLRQGQTRYPFLVMQFKKDE 317
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
++L +E +K+KY GKL P +EV+ ++ + + +KI P F H
Sbjct: 318 EVTIDLNMTEDVMKDKYAGKLSIHYEQPLHEVVTQVFRGLAGKKINQPAKDFLSHHSQYG 377
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKS 398
+ CS KA+ G++Y LE+ F+F+ KP +I +E+I + F+R GG+T R+FD + +K
Sbjct: 378 IKCSIKASEGFLYCLEKAFMFVPKPATYITYEQITVITFSRVGGATSASRTFDIAVGMKG 437
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY-----KEDFGSSDDEKEPDA 452
G T FS+I +EE L DF + K +RVKN + + D SSD+E
Sbjct: 438 GAGETQFSNINREEQKNLEDFFKIKGIRVKNEMDEDNTAHIALLNNPDMQSSDEE----V 493
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSD-EDSDASEG 511
AR R +A+ +DES DEDF D +ESDVAEEYDS + +D ED AS+G
Sbjct: 494 VAARADRGSADE-------DDESVDEDFKTD-SESDVAEEYDSAHESSGTDSEDEGASDG 545
Query: 512 TKKKKKEKS 520
+ KK K+
Sbjct: 546 ERPAKKAKT 554
>gi|393212314|gb|EJC97814.1| SSrecog-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 604
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/433 (37%), Positives = 246/433 (56%), Gaps = 26/433 (6%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-NGSLHRFAGFKE 79
GK ++ + + N +T +V + ++ + +W ++ + LRI LK G F GF
Sbjct: 17 GKFRMAASGMAWMNNETREVVSVPAAEIKWASWMRVARNFRLRIGLKEKGRRENFDGFMR 76
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ DK+ K ++ I + KE+S +GWNWG T F G L+F V+N TAFE+PL+ V+
Sbjct: 77 DDHDKLTGLMKQHYGIILENKEISFKGWNWGATDFQGQDLAFLVSNKTAFELPLQKVANS 136
Query: 140 -TTGKNEVTVEF-----HPNDEAAESLIEMRFYIPTNEI------AGD--------TDPV 179
G+ EV++EF P+ A + L+E+RFY+P +I AG+ T
Sbjct: 137 NIAGRTEVSLEFATSAGRPSRGAGDELVEIRFYVPGTQIKDIGSDAGEEQVEDEEETSAA 196
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
+AF D+V +A + TG+ I F E+ LTPRGRYD+ +F F +L GKT+DYKI
Sbjct: 197 QAFHDAVKEKAELGEVTGNVIVNFEEVLVLTPRGRYDVDMFPEFLRLRGKTYDYKINYDG 256
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ ++F LP KD + F++SL PI+QGQTRYHFL + F+++E EL E KY
Sbjct: 257 ISKLFLLP-KDDQHVLFILSLVNPIRQGQTRYHFLVMQFDREEEIRAELNIEEFVELAKY 315
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
E KL K ++EV++ I + + KI GSF TG + + KA G ++ LE+
Sbjct: 316 E-KLQKHYEASSFEVISSIFRALSKNKIIGSGSFSSRTGHPGIKANLKAVQGDLFILEKY 374
Query: 360 FIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLF 416
F+ K P+ I +I VNF+R GG ++R+FD + KSG HTFSS+ KEE+ +
Sbjct: 375 LFFVAKAPLLIELSDIHQVNFSRVGGPMATSRTFDLVVVTKSGPEHTFSSLNKEEHEGIE 434
Query: 417 DFIREKKLRVKNT 429
+++ KKLRVKNT
Sbjct: 435 GYLKGKKLRVKNT 447
>gi|50420839|ref|XP_458960.1| DEHA2D11374p [Debaryomyces hansenii CBS767]
gi|74602538|sp|Q6BS60.1|POB3_DEBHA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49654627|emb|CAG87121.1| DEHA2D11374p [Debaryomyces hansenii CBS767]
Length = 540
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 289/540 (53%), Gaps = 62/540 (11%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWA-------LRIFLKNGSLHR 73
G+++I D + +K T N + + L W+ LR+ KN +
Sbjct: 18 GRMRIADSGLGWKASVTNNASASNNAPFLLPSEEILASQWSRGSRGYELRVQTKNKGVVM 77
Query: 74 FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPL 133
GF + + + NF++++ KE S+RGWNWG T N L F VNN FEIP
Sbjct: 78 LDGFDVEDFANLKQELQRNFQVNLEHKEHSLRGWNWGKTDLARNELVFQVNNKPDFEIPY 137
Query: 134 RDVSQCT-TGKNEVTVEFH---PNDEAAESLIEMRFYIPTNEIAGDTDPV---------- 179
++S TGKNEV VEF+ N +A + ++EMRFYIP + +T P
Sbjct: 138 SEISNSNLTGKNEVAVEFNLDGANSKAGDEMVEMRFYIP-GTLENETTPAVKNEENGEVK 196
Query: 180 ----------EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGK 229
F + + ++A + G+AI F+++ LTPRGRYDI ++ + +L GK
Sbjct: 197 EEETEEISAATVFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPTSLRLRGK 256
Query: 230 TFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELP 289
T+DYKI + + R+F+LP D + VI +DPP++QGQT+Y FL + F ++E E++L
Sbjct: 257 TYDYKIQYNQIERIFSLPKPDEAHHLLVIQIDPPLRQGQTKYPFLVMQFAKEEEIELDLN 316
Query: 290 FSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAA 349
SE+E +KY+ +L K T+ VM+ K + R++ VPGSF+ ++CS KA+
Sbjct: 317 VSEEEYNDKYKDRLKKSYDSQTHLVMSHCFKGLTERRLVVPGSFQSRFLQPGISCSLKAS 376
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG----STRSFDFEIELK-SGVLHTF 404
GY+YPL+R F+F+ KP ++I F EI+++ +R+G ++R+FD +I L+ S H F
Sbjct: 377 EGYLYPLDRCFLFVTKPTVYIPFSEISSITMSRTGAGGVSTSRTFDMDITLRGSNQSHNF 436
Query: 405 SSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
SIE+EE + ++ +K LR+KN +EK A LA+ E A+
Sbjct: 437 GSIEREEQETIENYCLQKGLRIKN-----------------EEKLAKAMLAKAMNETADD 479
Query: 465 DDEDDEDEDES-------TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
DD+ D D + D+DFN ++SDVAEE+DS+ + +D++ E +KK K
Sbjct: 480 DDDADVDMGSAGDDDDESADDDFNSG-SDSDVAEEFDSDASVSDAEMSDSNQEPPQKKPK 538
>gi|410082744|ref|XP_003958950.1| hypothetical protein KAFR_0I00340 [Kazachstania africana CBS 2517]
gi|372465540|emb|CCF59815.1| hypothetical protein KAFR_0I00340 [Kazachstania africana CBS 2517]
Length = 542
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 280/541 (51%), Gaps = 58/541 (10%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L + W + + L+I KN
Sbjct: 17 GRFRIADSGLGWKVSTSGGSASNQAKAPFLLPATELSTIQWSRGCRGYELKINTKNQGTV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I F F I V KE S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDFNLIKGDFHRRFNIQVEHKEHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPTNEIAGDTDPV-------- 179
V+ T KNEV +EF+ DE A + L+EMRFYIP I D + +
Sbjct: 137 YSRVNNTNLTAKNEVGIEFNIQDESYQPAGDELVEMRFYIP-GVIENDEEGIKKEGIKEE 195
Query: 180 ------------------EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
EAF + + +A + GD I F ++ TPRGRYD+ I+
Sbjct: 196 VENGEGMEVDQEEEKTIAEAFYEELKEKADIGETAGDVIVSFQDVFFATPRGRYDVDIYK 255
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
+L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL + F +D
Sbjct: 256 DTIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQGQTTYPFLVMQFQKD 315
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA 341
E +E++L ++E + Y+ KL K+ T+ V++ ++K + NR++ VPG ++ SA
Sbjct: 316 EETEVQLNLEDEEYESNYKDKLKKQYDAKTHIVISHVLKGLTNRRVIVPGEYKSKYEQSA 375
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG-GST--RSFDFEIELKS 398
V+CSYKA GY+YPL+ F F+ KP ++I F +++ +N +R+G GST R+FD E+ L+S
Sbjct: 376 VSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSAINISRAGQGSTLSRTFDLEVVLRS 435
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
T F +I KEE L F+ K LRVKN K + + GS D+++ +
Sbjct: 436 NRGTTAFGNISKEEQPLLEQFLESKNLRVKNEEKEAQTRLQNALGSDSDDEDLNM----- 490
Query: 458 KREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
A E ++ DED S+D+D DVAEE+DS+ P +E SD KK K
Sbjct: 491 -GSAGEDEESVDEDFQASSDDD-------EDVAEEFDSD-VPLSDNEGSDEERPNKKVKT 541
Query: 518 E 518
E
Sbjct: 542 E 542
>gi|389632249|ref|XP_003713777.1| FACT complex subunit pob-3 [Magnaporthe oryzae 70-15]
gi|351646110|gb|EHA53970.1| FACT complex subunit pob-3 [Magnaporthe oryzae 70-15]
Length = 556
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 278/523 (53%), Gaps = 55/523 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ NW + + L+I +N L + GF++
Sbjct: 19 GKCRFAENGLGWKPAGGGDAFTLDQSNIGGANWSRAAKGYQLKILQRNSGLIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N +FE+P ++S
Sbjct: 79 DYERLSKIFKNWYSHNLENKEHSLRGWNWGKAEFGKAELTFNVQNRPSFEVPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPNDE-------AAESLIEMRFYIPT--------NEIAG------DTDP 178
G+NE+ VEF + E + + L E+RFYIP E AG + +
Sbjct: 139 LAGRNEIAVEFGVDGEKEKKPTASKDQLTEIRFYIPGTTTRKEAEGEDAGSDADEEEKNA 198
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
V F D+++ +A + GD IA F ++ LTPRGR+DI +++S F+L GKT+DYK+
Sbjct: 199 VTLFYDTLIEKADIGETAGDTIATFLDVLHLTPRGRFDIDMYDSSFRLRGKTYDYKLQYD 258
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
++ + LP D I LDPP++QGQTRY F+ + F +DE ++L +E+EL K
Sbjct: 259 SIKKFMVLPKPDEMHFLICIGLDPPLRQGQTRYPFIVMQFKRDEEVTLDLNLAEEELNGK 318
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYIYPLE 357
Y+ KL P ++V+ I + + N+KIT P SF+ H G + C+ KA+ G++Y LE
Sbjct: 319 YKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKSFQTHRGQLGIKCAIKASEGFLYCLE 378
Query: 358 RGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKSGVLHTFSSIEKEEYGK 414
+ F+F+ KP +I +E+ +V F+R GG+ T++FD I +K G FS+I +E+
Sbjct: 379 KAFMFVPKPATYISYEQTQSVTFSRVGGAVSATQTFDITIHMKGGGSSQFSNINREDLKA 438
Query: 415 LFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAA--ERDDEDDEDE 472
L F + K+LRVKN E + DA L R+ A DDE
Sbjct: 439 LETFFQAKELRVKN------------------EIDEDANLLAAMRDQAMVSSDDEVGPKA 480
Query: 473 DESTDEDFNPD-------QAESDVAEEYDSN--PTPTDSDEDS 506
D + ++ ++ESDVAEEYDS+ + T SDE+S
Sbjct: 481 DRGSADEDEESVDEDFQTESESDVAEEYDSDHESSGTGSDEES 523
>gi|440475817|gb|ELQ44479.1| FACT complex subunit pob-3 [Magnaporthe oryzae Y34]
gi|440477967|gb|ELQ58893.1| FACT complex subunit pob-3 [Magnaporthe oryzae P131]
Length = 557
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 278/523 (53%), Gaps = 55/523 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ NW + + L+I +N L + GF++
Sbjct: 20 GKCRFAENGLGWKPAGGGDAFTLDQSNIGGANWSRAAKGYQLKILQRNSGLIQLDGFQQE 79
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N +FE+P ++S
Sbjct: 80 DYERLSKIFKNWYSHNLENKEHSLRGWNWGKAEFGKAELTFNVQNRPSFEVPYSEISNTN 139
Query: 141 -TGKNEVTVEFHPNDE-------AAESLIEMRFYIPTN--------EIAG------DTDP 178
G+NE+ VEF + E + + L E+RFYIP E AG + +
Sbjct: 140 LAGRNEIAVEFGVDGEKEKKPTASKDQLTEIRFYIPGTTTRKEAEGEDAGSDADEEEKNA 199
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
V F D+++ +A + GD IA F ++ LTPRGR+DI +++S F+L GKT+DYK+
Sbjct: 200 VTLFYDTLIEKADIGETAGDTIATFLDVLHLTPRGRFDIDMYDSSFRLRGKTYDYKLQYD 259
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
++ + LP D I LDPP++QGQTRY F+ + F +DE ++L +E+EL K
Sbjct: 260 SIKKFMVLPKPDEMHFLICIGLDPPLRQGQTRYPFIVMQFKRDEEVTLDLNLAEEELNGK 319
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYIYPLE 357
Y+ KL P ++V+ I + + N+KIT P SF+ H G + C+ KA+ G++Y LE
Sbjct: 320 YKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKSFQTHRGQLGIKCAIKASEGFLYCLE 379
Query: 358 RGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKSGVLHTFSSIEKEEYGK 414
+ F+F+ KP +I +E+ +V F+R GG+ T++FD I +K G FS+I +E+
Sbjct: 380 KAFMFVPKPATYISYEQTQSVTFSRVGGAVSATQTFDITIHMKGGGSSQFSNINREDLKA 439
Query: 415 LFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAA--ERDDEDDEDE 472
L F + K+LRVKN E + DA L R+ A DDE
Sbjct: 440 LETFFQAKELRVKN------------------EIDEDANLLAAMRDQAMVSSDDEVGPKA 481
Query: 473 DESTDEDFNPD-------QAESDVAEEYDSN--PTPTDSDEDS 506
D + ++ ++ESDVAEEYDS+ + T SDE+S
Sbjct: 482 DRGSADEDEESVDEDFQTESESDVAEEYDSDHESSGTGSDEES 524
>gi|448512948|ref|XP_003866846.1| Pob3 protein [Candida orthopsilosis Co 90-125]
gi|380351184|emb|CCG21407.1| Pob3 protein [Candida orthopsilosis Co 90-125]
Length = 544
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 234/410 (57%), Gaps = 37/410 (9%)
Query: 56 LVGTWA-------LRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWN 108
L+ TW+ LRI KN + GF + ++ NF +++ KE S+RGWN
Sbjct: 55 LITTWSRGSKGYELRIQTKNKGVVSLDGFHPDDFAQLKQELTRNFHVNLEHKEHSLRGWN 114
Query: 109 WGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFH---PNDEAAESLIEMR 164
WG T N L F+VNN +FEIP +S TGKNEV +E + N + + ++EMR
Sbjct: 115 WGTTDLARNELVFNVNNKPSFEIPYDAISNSNLTGKNEVAIELNLDRSNKKMGDEVVEMR 174
Query: 165 FYIPTNEIAGDTDPV----------------------EAFKDSVMNQASVINATGDAIAV 202
FY+P I +T V + F + + ++A + G+AI
Sbjct: 175 FYVPGTTIEQETTTVKNEDGEEEEVVSTNIDTEQSAAQTFYEQLKDKADIGQIAGEAIVS 234
Query: 203 FNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDP 262
F + LTPRGRYDI ++++ +L GKT+DYKI + R+F+LP D + ++ +DP
Sbjct: 235 FGDALFLTPRGRYDIDMYSNSLRLRGKTYDYKIQYDQIERIFSLPKPDEVHHLIILQIDP 294
Query: 263 PIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVI 322
P++QGQTRY FL L F +DE +E+EL S++E +EKY+ +L K PT+ VMA ++ +
Sbjct: 295 PLRQGQTRYPFLVLQFVKDEETELELNLSDEEFEEKYKNRLKKTYDAPTHIVMAHCLRGL 354
Query: 323 VNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR 382
+K+ +PG+F+ ++CS KA+ GY+YPLER F+F+ KP ++I + EI+ V +R
Sbjct: 355 TEKKLVIPGAFQSRFLQPGISCSVKASEGYLYPLERCFLFVTKPTLYIPYSEISNVGLSR 414
Query: 383 SGG---STRSFDFEIE-LKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+GG ++R+FD EI + S V H F SI++EE + F K +RVKN
Sbjct: 415 AGGGVSASRTFDLEINIIGSTVKHVFGSIDREEQENIEKFCVGKGIRVKN 464
>gi|50303621|ref|XP_451752.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607465|sp|Q6CWD7.1|POB3_KLULA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49640884|emb|CAH02145.1| KLLA0B04906p [Kluyveromyces lactis]
Length = 555
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 287/549 (52%), Gaps = 64/549 (11%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ ++ + + +K TG Q N P ++ V W + + L+I KN L
Sbjct: 17 GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF++ + + + + F+ F + + +E S+RGWNWG N + F +N FEIP
Sbjct: 77 QMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDEA----AESLIEMRFYIP-TNEIAGDTDPV------- 179
++ T KNE+ +EF +EA + L+EMR Y+P T E D D +
Sbjct: 137 YTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAE 196
Query: 180 ---------------------------EAFKDSVMNQASVINATGDAIAVFNEIQCLTPR 212
E F + + ++A + +GDAI F ++ TPR
Sbjct: 197 AEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPR 256
Query: 213 GRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYH 272
GRYDI I+ + +L GKT++YK+ + R+F+LP D V+S+DPPI+QGQT Y
Sbjct: 257 GRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYP 316
Query: 273 FLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS 332
FL L F +DE +E++L + E ++ Y+ KL K+ T+ V++ ++K + R++ VPG
Sbjct: 317 FLVLQFQKDEETEVQLNVEDDEFEKLYKDKLKKQYDAKTHIVLSHVLKGLTGRRVIVPGE 376
Query: 333 FRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRS 389
++ AV+CSYK G++YPL+ F+F+ KP ++I F++IA VN +R+G S R+
Sbjct: 377 YKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSART 436
Query: 390 FDFEIELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEK 448
FD E+ +++ TF++I KEE L F+R K LRVKN K + + FGS D+
Sbjct: 437 FDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKNEDKEAEQRLQTAFGSDSDDD 496
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
+ D + EDE ES DEDF+ + DVAEE+DS + +DS+ ++
Sbjct: 497 DVDINMGSA-----------GEDE-ESVDEDFHASDEDDDVAEEFDSEASASDSEGETSK 544
Query: 509 SEGTKKKKK 517
SE KK K
Sbjct: 545 SERPSKKAK 553
>gi|320587727|gb|EFX00202.1| structure-specific recognition protein [Grosmannia clavigera
kw1407]
Length = 565
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 286/529 (54%), Gaps = 54/529 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G+ ++ ++ W + + ++I ++ + + GF++
Sbjct: 19 GKCRFAENGLGWKPAGGGEAFTLDQSNISGAQWSRASKGYEVKIQQRSSGIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE SVRGWNWG +F L F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKNWYSHNLENKEHSVRGWNWGKAEFTKAELIFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPNDEAA----------------ESLIEMRFYIPTN----EIAGD---- 175
G+NE++++F N++A + L+EMRFY+P E GD
Sbjct: 139 LAGRNEISIDFSLNEDAKTNGKGPIKGNKAAAGKDQLMEMRFYVPGTTTKKEADGDEAGS 198
Query: 176 -----TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
+ V F D++M +A + + GD IA F ++ LTPRGR+DI +++S F+L GKT
Sbjct: 199 GAEEEKNAVTLFYDTLMEKAEIGESAGDTIATFLDVLHLTPRGRFDIDMYDSSFRLRGKT 258
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
+DYKI + + LP D I LDPP++QGQTRY F+ + F +DE ++L
Sbjct: 259 YDYKIQYDAIKKFMVLPKPDEMHFMLCIGLDPPLRQGQTRYPFVVMQFKRDEEVTLDLNL 318
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAA 349
SE+EL+ +Y+ KL P ++V+ I + + N+K+T P F H + CS KA+
Sbjct: 319 SEEELESRYKDKLQSHYEQPLHQVVTYIFRGLANKKVTTPAKDFTTHRQQFGIKCSIKAS 378
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHT-FS 405
G++Y LE+ F+F+ KP +I +E+ +V F+R GG+ +FD + LKSG + FS
Sbjct: 379 EGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAVSTLSTFDITVHLKSGAGSSQFS 438
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYK------EDFGSSDDEKEPDAYLARVKR 459
+I +E+ L DF + K LRVKN E N +D SSDD EP A A+ R
Sbjct: 439 NINREDLKALEDFFKLKGLRVKNE-IDEDANLMAAALRDQDIDSSDD--EPGA--AKADR 493
Query: 460 EAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
+A+ D+E +++ ++ ++ESDVAEEYDSN + + DSDA
Sbjct: 494 GSADEDEESVDEDFQA--------ESESDVAEEYDSNHESSGTGSDSDA 534
>gi|344303122|gb|EGW33396.1| hypothetical protein SPAPADRAFT_66363 [Spathaspora passalidarum
NRRL Y-27907]
Length = 540
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 288/545 (52%), Gaps = 70/545 (12%)
Query: 19 CPGKLKITDQNIVFK--NKKTGKVEQINGP------DLDFVNWQKLVGTWALRIFLKNGS 70
PG+++I D + +K N G + P +L W + + LR+ KN
Sbjct: 16 LPGRMRIADSGLGWKAINPPAGSSAAPSVPFLLPSEELLTAQWSRGSRGYELRVQTKNKG 75
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ GF + ++ NF + + KE S+RGWNWG T N L F V+N AFE
Sbjct: 76 VVMLDGFDVDDFAQLKQELARNFSVTLEHKEHSLRGWNWGKTDLARNELVFQVSNKPAFE 135
Query: 131 IPLRDVSQCT-TGKNEVTVEFHPN---DEAAESLIEMRFYIP------------------ 168
I ++ TGKNEV +EF+ + ++A + ++EMRFY+P
Sbjct: 136 ITYDSINNSNLTGKNEVAIEFNLDGGANKAGDEVVEMRFYVPGTVENEKKTPPKKEEGEE 195
Query: 169 -------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
NEI+ + F + + ++AS+ G+AI F ++ LTPRGRYDI ++
Sbjct: 196 KVDEEPEVNEISA----AQVFYEQLRDKASIGQVAGEAIVSFGDVLFLTPRGRYDIDMYP 251
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
+ +L GKT+DYKI + R+F+LP D + ++ +DPP++QGQTRY FL L F ++
Sbjct: 252 TSLRLRGKTYDYKIQYDQIDRIFSLPKPDETHHLIILQIDPPLRQGQTRYPFLVLQFARE 311
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA 341
E +E+EL S++E KY+ +L K PT+ V + + + RK+ PGSF+
Sbjct: 312 EETELELNLSDEEFNAKYQDRLKKSYDAPTHVVASHCFRGLTERKLVTPGSFQSRFLQPG 371
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELK-SGV 400
V+CS KA+ GY++PL+R F+F+ KP I+I F EI+ V +R+GGS R+FD EI ++ S
Sbjct: 372 VSCSLKASEGYLFPLDRCFLFVTKPTIYIPFTEISDVTMSRTGGS-RTFDLEINVRGSNQ 430
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKRE 460
H F SI+KEE + F EK +RVKN +EK A LA+ +E
Sbjct: 431 SHVFGSIDKEEQETIERFCAEKGIRVKN-----------------EEKIAKAMLAKAIKE 473
Query: 461 AAERDDEDDEDEDESTDEDFNPDQ--------AESDVAEEYDSNPTPTDSDEDSDASEGT 512
A D+ DDED D + + + + +ESDVAEE+DS + +DS E SDA +
Sbjct: 474 GAA-DESDDEDVDMGSAGEDDEESADDDFQSGSESDVAEEFDSEASASDS-EMSDAEKDD 531
Query: 513 KKKKK 517
+ KK
Sbjct: 532 RPPKK 536
>gi|71020665|ref|XP_760563.1| hypothetical protein UM04416.1 [Ustilago maydis 521]
gi|74700723|sp|Q4P647.1|POB3_USTMA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|46100451|gb|EAK85684.1| hypothetical protein UM04416.1 [Ustilago maydis 521]
Length = 558
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 242/460 (52%), Gaps = 50/460 (10%)
Query: 19 CPGKLKITDQNIVFK-NKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK---------- 67
PGKL+++ + +K + G I + W ++ + L I+L
Sbjct: 17 TPGKLRMSQGGLGWKPSVGEGSTITIPADQMASFQWIRVARNYQLAIYLNKDRDAPSSAQ 76
Query: 68 -NGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNT 126
N F GF + D++ S + F + KE+S RGWNWG K + + F V +
Sbjct: 77 TNPRRTNFDGFVRDDFDRLSSHIRQYFNKPLEAKEVSTRGWNWGQAKISNHDVQFLVRDK 136
Query: 127 TAFEIPLRDVSQCTTGKNEVTVEF------HPNDEAAES--------------LIEMRFY 166
AFE+PL ++ K EV++EF P S L+EMR Y
Sbjct: 137 LAFELPLSHLANSNIAKTEVSMEFLNPEQQQPGANTGTSDVNGTKSRRSKGDQLVEMRLY 196
Query: 167 IPTNEI---------AGDTD------PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTP 211
+P I A D D EAF +++ ++A + GD+I VF E+ LTP
Sbjct: 197 VPGQAIKDDGSDAASAQDDDVNNEETAAEAFHEALKSKADIGQVAGDSIVVFKEVLVLTP 256
Query: 212 RGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRY 271
RGRYDI +F++F +L GKT+DYKI S++ ++F LP D VI LDPPI+QGQTRY
Sbjct: 257 RGRYDIDVFSTFIRLRGKTYDYKILYSSMNKLFLLPKADEIHVMLVIGLDPPIRQGQTRY 316
Query: 272 HFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG 331
+L L F ++E + EL EQ ++EKY+GKL K PT+ ++ I KV+ +K+ P
Sbjct: 317 PYLVLQFPREEEMDAELNLDEQTIQEKYDGKLKKRYEEPTFRIVTNIFKVLSGQKVATPT 376
Query: 332 SFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STR 388
F +G +++ C+ KAA G +YPLE+ +++ K P+++ + EI +R GG S++
Sbjct: 377 DFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVASSK 436
Query: 389 SFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+FD + KSG HTF SI +EE +L ++ ++K+R+KN
Sbjct: 437 TFDLRVATKSGTEHTFQSISREELDRLKAWLADRKVRIKN 476
>gi|260949365|ref|XP_002618979.1| hypothetical protein CLUG_00138 [Clavispora lusitaniae ATCC 42720]
gi|238846551|gb|EEQ36015.1| hypothetical protein CLUG_00138 [Clavispora lusitaniae ATCC 42720]
Length = 538
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 282/522 (54%), Gaps = 56/522 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLHRF 74
G+++I D + +K G N P ++ +W + + LR+ KN +
Sbjct: 18 GRMRIADSGLGWKASSNGDSTS-NAPFLLPSEEILATHWSRGSRGYELRVQTKNQGVVML 76
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF + K+ + NF + + KE S+RGWNWG N L F ++N FEIP
Sbjct: 77 DGFDAEDFAKMKQELQRNFHLTLEHKEHSLRGWNWGKADLARNELVFQIHNKPDFEIPYS 136
Query: 135 DVSQCT-TGKNEVTVEFHPNDE--AAESLIEMRFYIPT---NEI---------------- 172
+++ TGKNEV +E + +E A + L+EMRFYIP NE
Sbjct: 137 EIANSNLTGKNEVAIEMNLTNEDKAGDELVEMRFYIPGTVENETKKTVKNEDGSEKVEEE 196
Query: 173 AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFD 232
+ + F D + ++A + G+AI F+++ LTPRGRYDI ++ + +L GKT+D
Sbjct: 197 TEEVNAAAVFYDQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPTSLRLRGKTYD 256
Query: 233 YKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSE 292
YKI + R+F+LP D + V+ +DPP++QGQTRY FL L F+++E +E+EL ++
Sbjct: 257 YKIQYKQIERIFSLPKPDDVHHLIVLQIDPPLRQGQTRYPFLVLQFSREEETELELNLAD 316
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
KY+ +L K T+ VM++ +K + R++ VPGSF+ + V+CS KA+ GY
Sbjct: 317 DVYDSKYKDRLKKTYDSQTHIVMSQCLKGLTERRLIVPGSFQSRFLQAGVSCSLKASEGY 376
Query: 353 IYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSG-VLHTFSSIE 408
+YPL+R F+F+ KP ++I + E++TV +R+ ++R+FD E+ L+ G H F++I+
Sbjct: 377 LYPLDRCFLFVTKPTVYIPYSEVSTVTMSRTSTGVSASRTFDLEVNLRGGNQSHVFANID 436
Query: 409 KEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARV-----KREAAE 463
KEE + + +EK LR+KN +EK A LA+ +
Sbjct: 437 KEEQETIERYCQEKGLRIKN-----------------EEKIAKAMLAKAMTGDDDDDDDA 479
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED 505
D E+ES D+DF +ESDVAEE+DSN + +DSDE+
Sbjct: 480 DVDMGSAGEEESDDDDFGSG-SESDVAEEFDSNASASDSDEE 520
>gi|402087007|gb|EJT81905.1| FACT complex subunit pob-3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 562
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 277/511 (54%), Gaps = 48/511 (9%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ NW + + ++I +N + + GF++
Sbjct: 19 GKCRFAEHGLGWKPSGGGDAFTLDSSNIGGANWSRAAKGYQVKIMQRNSGVIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N +FE+P ++S
Sbjct: 79 DYERLTRVFKNWYSHNLENKEHSLRGWNWGKAEFGKAELTFNVQNRPSFEVPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPNDEAA-----------ESLIEMRFYIPTN---------EIAGDTD-- 177
G+NE+ VEF N+++ + L E+RFYIP + A D D
Sbjct: 139 LAGRNEIAVEFAVNEDSGKGKGQKATAGKDQLTEIRFYIPGTTTRKEAEGEDAASDADEE 198
Query: 178 ---PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYK 234
V F D+++ +A + GD IA F ++ LTPRGR+DI +++ F+L GKT+DYK
Sbjct: 199 EKNAVTIFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDGSFRLRGKTYDYK 258
Query: 235 IPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQE 294
+ + + LP D I LDPP++QGQTRY F+ + F +DE ++L +E+E
Sbjct: 259 LQYDAIRKFMVLPKPDEMHFLICIGLDPPLRQGQTRYPFIVMQFKRDEEVTLDLNLTEEE 318
Query: 295 LKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYI 353
L KY+ KL P ++V+ I + + N+KIT P F+ H G + + CS KA+ G++
Sbjct: 319 LNVKYKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKGFQTHRGQTGIKCSIKASEGFL 378
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKE 410
Y LE+ F+F+ KP +I +E++ +V F+R GG +T++FD I +++G FS+I +E
Sbjct: 379 YCLEKAFMFVPKPATYISYEQVGSVTFSRIGGAVSATQTFDITIHMRTGTSSQFSNINRE 438
Query: 411 EYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD 465
+ L F + K+LRVKN ++ SSDDE P R R +A+
Sbjct: 439 DLKALESFFQAKELRVKNELDEDANLMAAAMRQQAMDSSDDEVGP-----RADRGSADE- 492
Query: 466 DEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
++ES DEDF D +ES+VAEE+DS+
Sbjct: 493 ------DEESVDEDFQAD-SESEVAEEFDSD 516
>gi|452987761|gb|EME87516.1| hypothetical protein MYCFIDRAFT_54703 [Pseudocercospora fijiensis
CIRAD86]
Length = 567
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 279/562 (49%), Gaps = 74/562 (13%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK ++ + + +K G ++ + W + + ++I+ +N + + GFKE
Sbjct: 15 PGKCRLAESGLGWKPLGGGNTFTLDKGEYMSAQWSRAARGYEMKIYARNAGVVQLDGFKE 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D I FK + + KE ++RGWNWG + + L F+V N AFEIP ++S
Sbjct: 75 DDFDTIQKCFKVWYGVPFEHKEHALRGWNWGKNELSRHELIFNVRNQPAFEIPYTEISNT 134
Query: 140 T-TGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNE----- 171
GKNEV VEF P D A + L E+RFYIP E
Sbjct: 135 NLAGKNEVAVEFSVPADSEDTGTNGALGGARGKGKKMGGAVDQLTEVRFYIPGTEKRAKG 194
Query: 172 ----------IAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
+ + F + +MN+A + GD A F +I LTPRGR+DI ++
Sbjct: 195 DEDGEDAEEGEDEEQNAANYFYEQLMNKAEIGEVAGDTFATFQDILHLTPRGRFDIDLYE 254
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI + R F LP D + LDPP++QGQTRY FL + F +D
Sbjct: 255 SSFRLRGKTYDYKISYESAKRFFLLPKPDDMHQLLCVGLDPPLRQGQTRYPFLVMQFKKD 314
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTS 340
E ++EL ++++L EKY GKL + P V++KI + +++ P + F H S
Sbjct: 315 EEVQIELNMTDEQL-EKYSGKLQAKYEAPIGNVISKIFHGLTGKRLIQPSADFTSHHQMS 373
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ L+R F+F+ KP +I F+ I++V +R GG ++R+FD + LK
Sbjct: 374 GVKCSIKANEGHLFCLDRAFLFVPKPATYISFDHISSVTMSRVGGAVSASRTFDITVSLK 433
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE------DFGSSDDEKEPD 451
G H FS+I +EE L F++ K ++ KN G+ D SSDDE D
Sbjct: 434 QGGDHQFSNINREEQQPLETFLKIKNIKTKNEMDGDSGMLAAALANDPDLVSSDDE---D 490
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPT----------- 500
AR + + ES DEDF D +ESDVAEEYDS+ +
Sbjct: 491 VVQARGSADEDD----------ESVDEDFQAD-SESDVAEEYDSDAKSSGAGSDEEMGDA 539
Query: 501 DSDEDSDASEGTKKKKKEKSRK 522
D D D +ASE K E+ +K
Sbjct: 540 DGDADGNASESDTAAKVERPKK 561
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 323/649 (49%), Gaps = 57/649 (8%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + F VS G G L++ + +K G+ I D+ V + ++ G
Sbjct: 1 MADEQTFGSVSLIAGGITSQGALRLGADKVEWKKAGGGRSVAIAKADVGEVTYSQIPGGV 60
Query: 61 ALRIFLKNGS-LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF-IGNV 118
L + K + R GF+ +++ + K + +DV ++++ V G NWG +
Sbjct: 61 TLTVRSKGTAPAMRMKGFRGSDMATVKEAMKALYDVDVVKRDMQVIGRNWGQIEVDQAGA 120
Query: 119 LSFDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIP-TNEI 172
++FDV FEI +DV+ K+EV +EFH +D ++++EM FY+P TN+
Sbjct: 121 ITFDVEGKRQFEISSKDVAAVAMPTKHEVMLEFHMDDAVMNASKDAMVEMSFYVPPTNKT 180
Query: 173 AG-------DTDP----VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
G D DP + D +M V ATGDAIA F+ + + PRG+ I++F
Sbjct: 181 WGVDGWGTDDHDPDDTGAKRLSDRLMEVCDVDTATGDAIAEFDSVSLVAPRGKVGIELFA 240
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
+ +L+G D+KI S++ R+F LP Q + ++ LDPPI++GQT Y + +FN +
Sbjct: 241 NHLRLNGNAVDFKIQHSSIQRLFLLPKPTNAQTYAILHLDPPIRKGQTFYPHIVAVFNAN 300
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA 341
E E+E P + LKEK ++ GP+ EV +++K + K+T G+F G A
Sbjct: 301 EELEVE-PLMDAALKEKLGDAVEDSYDGPSSEVFIRLLKAVAGVKLTRQGTFASPAGGHA 359
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS----TRSFDFEIELK 397
V S KA G++YPLE+ F ++ KPP+ + + E+ + F R G+ R+FD + ++
Sbjct: 360 VKASNKAEVGHLYPLEKSFFYLPKPPMLLPYAEVTEIEFERHAGAGPTTQRTFDMAVSMR 419
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
+G +H F SI K E+ L F+ KKL++ N + + D SD ++ D + AR+
Sbjct: 420 NGAVHQFHSIPKSEFQNLVSFLTAKKLKIVNVDAQARADAIIDGADSDSDR--DHHAARL 477
Query: 458 KREAAERDDEDDED----EDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTK 513
K + +R E DED D DEDFN +ESD E PTDS + +
Sbjct: 478 KAKVKKR--ELDEDGFGGSDSEEDEDFNAG-SESDDGE-------PTDSSGSEGSESEEE 527
Query: 514 KKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIK 573
+ K+K++ + + KKD N PK+P+SA+M++ + R +
Sbjct: 528 ARPKKKTKSKAK-----------------AKAKAKKDPNEPKRPLSAFMIFSKETRGDVL 570
Query: 574 KDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+ NP + ++ K+ G W+ + + K E++ K AK Y A+K YK
Sbjct: 571 EKNPDFALGDVGKELGRRWREIDPELKKEFEAKAADAKVAYEAAMKEYK 619
>gi|449549244|gb|EMD40210.1| hypothetical protein CERSUDRAFT_112414 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 249/443 (56%), Gaps = 34/443 (7%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
L P GK +I + +K +++ ++ I+ D+ + W ++ + LR+ L++ F
Sbjct: 11 GLSPELGKFRIAASGMAWKGEESEQMVAISSADIKWTQWMRVARGYQLRVGLRDRKREIF 70
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF + DK+ K +F I + KE+SV+GWNWG T F G+ L+F V+N TAFE+PL
Sbjct: 71 DGFVREDHDKLAQLMKQHFSIALETKEVSVKGWNWGVTDFQGDDLAFVVSNKTAFELPLT 130
Query: 135 DVSQC-TTGKNEVTVEFH-------PNDEAAESLIEMRFYIPTNEI-------AG----- 174
+V+ G+ EV++EF P+ A + ++E+RFY+P AG
Sbjct: 131 NVANSNIAGRTEVSLEFAAPSNSKKPSKGAPDEMVEIRFYVPGTHTRSARGSDAGSQKSD 190
Query: 175 ----DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
+ +AF D+V +A + + D I F E+ LTPRGRYD+ +F F +L GKT
Sbjct: 191 DEEEEISAAQAFHDTVKEKAEIGQVSADVILSFEEVLVLTPRGRYDVDMFREFLRLRGKT 250
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
+DYKI S++ R+F LP KD + F++ L PI+QGQTRY +L + ++++E EL
Sbjct: 251 YDYKIMYSSISRLFLLP-KDDQHVLFILGLSNPIRQGQTRYQYLVMQYSREEEITAELNM 309
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
E+E+ KY+ +L K PT+EV++ + + + +KI GSF+ H G + + KA
Sbjct: 310 EEEEVA-KYD-RLKKNYEDPTFEVVSGVFRALSGKKIIGAGSFQSHNGHPGIKANLKAVQ 367
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFS 405
G ++ LE+ F+ K P I +I V F+R G + R+FD +I KSG +TF+
Sbjct: 368 GDLFMLEKFIFFVSKQPTLIELSDIHQVVFSRLGAGLGATAARTFDLKIVTKSGPEYTFT 427
Query: 406 SIEKEEYGKLFDFIREKKLRVKN 428
SI KEE+ ++R+KK++VKN
Sbjct: 428 SINKEEHEGTEAYLRDKKVKVKN 450
>gi|45190743|ref|NP_984997.1| AER138Cp [Ashbya gossypii ATCC 10895]
gi|74693527|sp|Q756X6.1|POB3_ASHGO RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|44983722|gb|AAS52821.1| AER138Cp [Ashbya gossypii ATCC 10895]
gi|374108220|gb|AEY97127.1| FAER138Cp [Ashbya gossypii FDAG1]
Length = 542
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 287/530 (54%), Gaps = 53/530 (10%)
Query: 19 CPGKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGS 70
G+ ++ + + +K TG Q N P +L V W + + L+I KN
Sbjct: 15 VSGRFRLGEGGLGWKASATGGSAAMQNNEPILLTADELASVQWSRGCRGYELKINTKNKG 74
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ + GF + + + + + F + + K+ S+RGWNWG T N L F +N FE
Sbjct: 75 VVQLDGFSQEDFTLLKNDLQRRFNVQLEHKDHSLRGWNWGTTDLTRNELIFSLNGKPTFE 134
Query: 131 IPLRDVSQCT-TGKNEVTVEFHPN----DEAAESLIEMRFYIP---TNE-----IAGDTD 177
IP +S T KNEV +EF + A + L+EMR Y+P T E A D D
Sbjct: 135 IPYSHISNTNLTSKNEVALEFDLQKDGYNPAGDELVEMRLYVPGVVTQEDRHSSPAEDAD 194
Query: 178 P------------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQ 225
EAF + + +A + +GDAI F ++ TPRGRYDI I+ + +
Sbjct: 195 VDMEKDNKEEKSIAEAFYEELRAKAEIGEVSGDAIISFQDVFFTTPRGRYDIDIYKNSIR 254
Query: 226 LHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSE 285
L GKT++YK+ + R+F+LP D + V+S++PP++QGQT Y +L L F +DE +E
Sbjct: 255 LRGKTYEYKLQHRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTTYPYLVLQFQKDEETE 314
Query: 286 MELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCS 345
++L + E + Y+ KL K+ T+ V++ ++K + + ++ VPG ++ AV+CS
Sbjct: 315 VQLNVEDDEFERLYKDKLKKQYDAKTHVVLSHVLKGLTDTRVVVPGEYKSKHEQCAVSCS 374
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGV-L 401
+KA G++YPL+ F+F+ KP ++I F+++++VN +R+G +T R+FD E+ L+S
Sbjct: 375 FKANEGHLYPLDNAFMFLTKPTLYIPFQDVSSVNISRAGQATTSSRTFDLEVVLRSNRGS 434
Query: 402 HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREA 461
TF++I KEE L F++ K +RVKN K + + GS D ++ D + A
Sbjct: 435 TTFANISKEEQQILESFLKSKNVRVKNEEKETQQRLQTALGS--DSEDEDVNMG----SA 488
Query: 462 AERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
AE +DES DEDF + + DVAEE+DS+ ++S +++A++G
Sbjct: 489 AE--------DDESVDEDFQAESEDDDVAEEFDSDAGVSES--ETEAADG 528
>gi|156842196|ref|XP_001644467.1| hypothetical protein Kpol_520p32 [Vanderwaltozyma polyspora DSM
70294]
gi|156115110|gb|EDO16609.1| hypothetical protein Kpol_520p32 [Vanderwaltozyma polyspora DSM
70294]
Length = 542
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 282/547 (51%), Gaps = 71/547 (12%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN
Sbjct: 17 GRFRIADSGLGWKAAASGGSATNQNKAPFLLPASELSTVQWSRGCRGFELKINTKNQGAL 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF E + + I F F I V KE S+RGWNWG N + F +N FEIP
Sbjct: 77 QLDGFSEDDFNIIKGDFHRRFSIQVEHKEHSLRGWNWGKADLARNEMVFSLNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP--TNEIAGDTDP------- 178
++ T KNEV +EF DE A + L+EMRFYIP E + + P
Sbjct: 137 YSRINNTNLTNKNEVAIEFDIQDENYQPAGDELVEMRFYIPDAVKEESDEEKPKTEEGDV 196
Query: 179 ---------------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
E F D + +A + GD I F ++ TPRGRYDI I+ +
Sbjct: 197 EMEGEEKEEKEEKSLAETFYDELKEKADIGETAGDVIVSFPDVFFTTPRGRYDIDIYKNS 256
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
+L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL L F ++E
Sbjct: 257 IRLRGKTYEYKLQHRQIQRIVSLPKADDINHLIVLAIEPPLRQGQTSYPFLVLQFQKEEE 316
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVT 343
+E++L +++ + Y+ KL K+ T+ V++ I+K I R++ VP ++ AV+
Sbjct: 317 TEVQLNLDDEDYETNYKDKLKKQYDAKTHIVISHILKGITGRRVIVPAEYKSKYEQCAVS 376
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST--RSFDFEIELK-SGV 400
CSYKA GY+YPL+ F F+ KP ++I F +I+++N +R+G +T R+FD E+ L+ +
Sbjct: 377 CSYKANEGYLYPLDNAFFFLTKPTLYIPFSDISSINISRAGQTTTSRTFDLEVILRFNRG 436
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKRE 460
TF++I +EE L +++ K LRV+N +EKE A+ + +
Sbjct: 437 STTFANISREEQQILEQYLKSKNLRVRN-----------------EEKE-----AQQRLQ 474
Query: 461 AAERDDEDDED--------EDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGT 512
+A D +DED EDES DE+F+ + DVAEE+DS+ P+ ED + S+
Sbjct: 475 SALGSDSEDEDINMGSAGEEDESVDEEFHDSSDDDDVAEEFDSD-VPSSGGEDEEGSDSE 533
Query: 513 KKKKKEK 519
+ KK K
Sbjct: 534 RPAKKPK 540
>gi|366987573|ref|XP_003673553.1| hypothetical protein NCAS_0A06120 [Naumovozyma castellii CBS 4309]
gi|342299416|emb|CCC67170.1| hypothetical protein NCAS_0A06120 [Naumovozyma castellii CBS 4309]
Length = 543
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 280/538 (52%), Gaps = 54/538 (10%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKAAANGGSASTQAKAPFLLPATELSTVQWSRGCRGYELKINTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I S F F I V KE S+RGWNWG T N L F +N FEIP
Sbjct: 77 QLDGFSQDDFNIIKSDFHRRFSIQVEHKEHSLRGWNWGKTDLARNELVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP----TN------------- 170
++ T KNEV +EF+ DE A + L+EMRFY+P TN
Sbjct: 137 YSHINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYLPGTIETNNEDELPKIEAEDG 196
Query: 171 ---EIAGDTDP---VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
E A D + E+F + + +A + GDAI F ++ TPRGRYDI ++ +
Sbjct: 197 IKEEAAVDKEEKSLAESFYEELKEKADIGEVAGDAIVSFQDVFFATPRGRYDIDVYKNSI 256
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL L F +DE +
Sbjct: 257 RLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQGQTTYPFLVLQFQKDEET 316
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTC 344
E++L +++ + Y+ KL K T+ V++ ++K + +++ VPGS+ AV+C
Sbjct: 317 EVQLNLEDEDYETNYKDKLKKSYDAKTHVVISHVLKGLTGKRVIVPGSYTSKFEQCAVSC 376
Query: 345 SYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV- 400
SYKA GY+YPL+ F F+ KP ++I F ++++VN +R+G S+R+FD EI L+
Sbjct: 377 SYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTSTSSRTFDLEIILRLNRG 436
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKRE 460
TF +I KEE L F++ K LRVKN K + E+ +A + +
Sbjct: 437 STTFGNISKEEQQLLEQFLKSKNLRVKNEEKETQ------------ERLQNALGSDSDDD 484
Query: 461 AAERDDEDDEDEDESTDEDFNP-DQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
ED DES D DF+ + E DVAEE+DS+ +D + SDA E KK K
Sbjct: 485 GDINMGSAGED-DESEDVDFHASSEGEDDVAEEFDSDAPVSDEEAGSDADERPAKKPK 541
>gi|403216159|emb|CCK70657.1| hypothetical protein KNAG_0E04040 [Kazachstania naganishii CBS
8797]
Length = 544
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 277/536 (51%), Gaps = 52/536 (9%)
Query: 21 GKLKITDQNIVFK---NKKTGKVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSL 71
G+ +I D + +K + + Q+ P +L + W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKPATSGGSAAAAQLRQPFLLPATELSAIQWSRGARGYELKINTKNQGV 76
Query: 72 HRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEI 131
+ GF + + + F F I + KE S+RGWNWG T N L F +N FEI
Sbjct: 77 LQLDGFTPEDFNLVKGDFHRRFNIQLEHKEHSLRGWNWGKTDLARNELVFALNGKPTFEI 136
Query: 132 PLRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIPTNEIAGDTD--------- 177
P ++ T KNEV +EF+ DE A + L+EMRFYIP +TD
Sbjct: 137 PYSRINNTNLTAKNEVGIEFNLQDENYQPAGDELVEMRFYIPGVIADNETDGSIPAAAEG 196
Query: 178 ---------PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
E+F + + +A + GD I F +I TPRGRYD+ I+ +L G
Sbjct: 197 DSQTPTEKTVAESFYEELRERADIGETAGDVIVSFQDIFFATPRGRYDVDIYKDTIRLRG 256
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT++YK+ + R+ +LP D + V+++DPP++QGQT Y FL L F +E +E++L
Sbjct: 257 KTYEYKLQYRQIQRIVSLPKADDIHHLLVLAIDPPLRQGQTSYPFLVLQFQNEEETEVQL 316
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
+ E + Y+ KL K T+ V++ ++K + +R++ +PG ++ AV+CSYKA
Sbjct: 317 NIDDDEYEAHYKDKLKKHYDAKTHIVISHVLKGLTDRRVIIPGEYKSKYEQCAVSCSYKA 376
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHTF 404
GY+YPL+ F F+ KP ++I F ++++VN +R+G S R+FD E+ L+ TF
Sbjct: 377 NEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTSTSARTFDLEVVLRMNRGSTTF 436
Query: 405 SSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
+I KEE L F++ K LRVKN K + + GS DE + +A
Sbjct: 437 GNISKEEQQLLEQFLKSKGLRVKNEEKEAQERLQTALGSDSDED------GDINMGSAGE 490
Query: 465 DDEDDEDEDESTDEDFNPDQA--ESDVAEEYDSNPTPTDSDEDSDAS-EGTKKKKK 517
D DES DEDF+ + DVAEE++S+ + +D +D++ S +G+ + K
Sbjct: 491 D-------DESVDEDFHVSSGGEDDDVAEEFNSDASMSDDGDDAELSGDGSNRPSK 539
>gi|302406072|ref|XP_003000872.1| FACT complex subunit pob-3 [Verticillium albo-atrum VaMs.102]
gi|261360130|gb|EEY22558.1| FACT complex subunit pob-3 [Verticillium albo-atrum VaMs.102]
Length = 578
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 269/539 (49%), Gaps = 74/539 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ + W + + ++I ++ + + GF +
Sbjct: 19 GKCRFAETGLGWKPAGGGDTFTLDASAIASAQWSRAAKGYEIKILSRDTRIIQLDGFPQD 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
E +++ FK + + KE ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 79 EFERLSKLFKNWYSTTLENKEHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSEISNTN 138
Query: 140 TTGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIP--------- 168
G+NEV VEF P DE + L+EMRFYIP
Sbjct: 139 LAGRNEVAVEFAAPTDENDTGTNGTLDGARGKGKKAGAGKDQLVEMRFYIPGVAKKETDD 198
Query: 169 ------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
+ + V F D++M +A + GDAIA F +I LTPRGR+DI ++++
Sbjct: 199 DDAGSDAGGGQEEKNAVTLFYDTLMEKAEIGETAGDAIAQFLDILHLTPRGRFDIDMYDT 258
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI + + LP D + LDPP++QGQTRY F+ + F +DE
Sbjct: 259 SFRLRGKTYDYKIQYEAIKKFMVLPKPDDAHVMLCVGLDPPLRQGQTRYPFVVMQFKKDE 318
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
+++ +E+++KEKY KL P ++V+ I + + N+K+T P F+ H
Sbjct: 319 EVTLDVNLTEEQIKEKYGDKLQSHYEQPLHQVITYIFRGLANKKVTTPAKDFQTHRNQLG 378
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKS 398
+ CS KA+ G++Y LE+ F+FI KP +I +E+ A++ F+R GG+ +FD + +K+
Sbjct: 379 IKCSIKASEGFLYCLEKAFMFIPKPATYIAYEQTASITFSRVGGAVSALSTFDITVLMKN 438
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
G T FS+I +E+ L F + K LRVKN E + DA L +
Sbjct: 439 GAGSTQFSNISREDLKGLETFFKLKNLRVKN------------------EIDEDANLLKA 480
Query: 458 KREAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDSNPTPTDSDE 504
DD +DE D DF D +ESDVAEEYDSNP +DS++
Sbjct: 481 ALREEAMDDSEDEVVGNKADRGSADEDEESVDEDFRAD-SESDVAEEYDSNPETSDSED 538
>gi|344234731|gb|EGV66599.1| hypothetical protein CANTEDRAFT_117679 [Candida tenuis ATCC 10573]
Length = 546
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 284/539 (52%), Gaps = 49/539 (9%)
Query: 21 GKLKITDQNIVFKNKKTG-KVEQINGP-------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+++I D + +K TG Q N P L F+ W + + LR+ KN +
Sbjct: 18 GRMRIADSGLGWKASSTGANGAQTNQPFLLPSEEILSFM-WSRGSRGYELRVQTKNKGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
GF ++ + NF++ + KE S+RGWNWG T N L F +N +FEIP
Sbjct: 77 SLDGFDSENFAELKQELQRNFQMSLEHKEHSLRGWNWGKTDLARNELIFSINGKPSFEIP 136
Query: 133 LRDVSQC-TTGKNEVTVEFHPNDEAAES---LIEMRFYIPT---NEIAGDT--------- 176
+++ TGKNEV VE + A+++ L+EMRFY+P NE T
Sbjct: 137 YSEINNSNLTGKNEVAVELNLETSASKAGDELVEMRFYVPGVVENETKTVTKVKNEEGEE 196
Query: 177 -----------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQ 225
F + + + A++ G+AI F+++ LTPRGRYDI ++ + +
Sbjct: 197 KEHEEAEIEEISAASVFYEQLKDNANIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPTSLR 256
Query: 226 LHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSE 285
L GKT+DYKI + R+F+LP D + V+ +DPP++QGQTRY FL L F ++E E
Sbjct: 257 LRGKTYDYKIQYKQIERIFSLPKPDETHHLVVLQIDPPLRQGQTRYPFLVLQFAREEEIE 316
Query: 286 MELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCS 345
+EL SE++ K KYEGKL K T+ VM+ K + R++ PGSF+ V C+
Sbjct: 317 VELNLSEEDYKSKYEGKLKKRYDAETHLVMSHCFKGLTERRLIAPGSFQSRFLQPGVACN 376
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELK-SGVL 401
KA+ GY+YPL+R F+F+ KP ++I F E++ + +R+G ++R+FD EI L+ S
Sbjct: 377 LKASEGYLYPLDRCFLFVTKPTVYIPFSEVSNIVMSRTGTGVSASRTFDLEINLRSSNQS 436
Query: 402 HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREA 461
H F SI++EE + + +K LR+KN K K + + D+ E D A
Sbjct: 437 HVFGSIDREEQASIESYCVQKGLRIKNEEKVAKAMMAKALNEAADDDEDDDDADIDMGSA 496
Query: 462 AERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKS 520
E + E+D D + +D SD AEE+DS+ + + SD+++ + G KKK KS
Sbjct: 497 GEEESEEDGDFNSGSD---------SDPAEEFDSDASLSGSDDENMSEGGEPAKKKTKS 546
>gi|255931771|ref|XP_002557442.1| Pc12g05980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582061|emb|CAP80225.1| Pc12g05980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 558
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 289/557 (51%), Gaps = 68/557 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF +
Sbjct: 15 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGFELKILSRSSGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F L+F+V N AFE+P ++S
Sbjct: 75 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELAFNVQNRPAFEVPYSEISNT 134
Query: 140 T-TGKNEVTVEFH-PNDEAAES--------------------LIEMRFYIPTNEI----- 172
G+NEV VEF P + ++S L+EMRFYIP +
Sbjct: 135 NLAGRNEVAVEFSLPAGDGSDSVAKPGSTRNRGRKAAAGPDELVEMRFYIPGTAVKKEKM 194
Query: 173 -------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
A + + F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 195 EGADGEEEDNEEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 254
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI S + + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 255 YESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVMQLK 314
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
DE +E+ +E LK++Y+ +L P ++V+ K+ + + +K+ +P F H G
Sbjct: 315 LDEEISLEMNMTEDILKDQYKDRLQPHYEEPIHQVVTKVFRGLSGKKVIMPSKDFSSHHG 374
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
V CS KA G +Y L++ +F+ KP +I+ E IA V +R GG ++R+FD +
Sbjct: 375 HQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQLENIAIVTMSRVGGAVSASRTFDITVS 434
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEK 448
LK G+ H FS+I +EE L DF + K +R+KN E + GSSD+E
Sbjct: 435 LKGGLGEHQFSNINREEQKSLEDFFKAKSIRIKNEMAEEAAGLIAAALDNDAMGSSDEEA 494
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS-NPTPTDSDED-S 506
PD R +A+ D+E +++ + +ESDVAEE+DS + + DSDE+
Sbjct: 495 RPD-------RGSADEDEESVDEDFAGS--------SESDVAEEFDSDHESSGDSDEEMG 539
Query: 507 DASEGTKKKKKEKSRKT 523
DAS+G + + +KT
Sbjct: 540 DASDGGDNEDERPKKKT 556
>gi|406867832|gb|EKD20870.1| structure-specific recognition protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 576
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 282/566 (49%), Gaps = 79/566 (13%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG+ + + +K G ++ ++ W + + ++I L+N + + GF +
Sbjct: 27 PGRCRFAETGFGWKPTGGGDTFTLDHSNIGSAQWSRAAKGYEVKIMLRNSGVVQLDGFSQ 86
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++I FK + ++ KE ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 87 EDFERIGKVFKNWYSTNLEHKEHALRGWNWGKGEFGKAELAFNVQNRPAFEIPYSEISNT 146
Query: 140 T-TGKNEVTVEFHPNDEA----------------------AESLIEMRFYIPT-----NE 171
GKNEV +EF A + L+EMRFYIP
Sbjct: 147 NLAGKNEVAIEFALPAGADDTGTNGALGGARGKGKKAGGGKDQLVEMRFYIPGVTTKKAA 206
Query: 172 IAGDTDPVEA------------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ G+ P +A F D++M +A + GD A F ++ LTPRGR+DI +
Sbjct: 207 LDGEDAPSDAEDAEEEQNAANLFYDTLMEKAEIGEVAGDTFATFLDVLHLTPRGRFDIDM 266
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ + F+L GKT+DYKI T+ ++ LP D + LDPP++QGQTRY FL + F
Sbjct: 267 YENSFRLRGKTYDYKITYDTLKKIIVLPKPDELHFMMCVGLDPPLRQGQTRYPFLVMQFK 326
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS------- 332
+DE ++L +++ L +KY+GKL P ++V+A++ + + +K+ +P
Sbjct: 327 KDEEVTIDLNMTDELLNDKYQGKLAAHYEQPLHQVVAQVFRGLTGKKVNMPAKDFMSKYP 386
Query: 333 FRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRS 389
+ H + CS KA+ G++Y LE+ F+F+ KP + F++I ++ F+R GG ++R+
Sbjct: 387 LQSHHQQYGIKCSIKASEGFLYCLEKAFMFVPKPASWVPFDKIDSIVFSRVGGAVSASRT 446
Query: 390 FDFEIELKSGVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEK 448
FD + K T FS+I +EE L DF + K LRVKN + ++
Sbjct: 447 FDLTLHEKGSSTETQFSNINREEQKPLEDFFKVKGLRVKN----------------EMDE 490
Query: 449 EPDAYLARVKRE----------AAERDDEDDEDED-ESTDEDFNPDQAESDVAEEYDSNP 497
+ A LA R+ A R D DED ES DEDF D +ESDVAEEYDS
Sbjct: 491 DTSALLAAALRDPDMVSSDEEVVAARADRGSADEDSESADEDFKTD-SESDVAEEYDSAH 549
Query: 498 TPTDSDEDSDASEGTKKKKKEKSRKT 523
+ +D D + +++ K KT
Sbjct: 550 ESSGGSDDEDGAGSDAEQRPAKKAKT 575
>gi|384491091|gb|EIE82287.1| hypothetical protein RO3G_06992 [Rhizopus delemar RA 99-880]
Length = 541
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 233/407 (57%), Gaps = 31/407 (7%)
Query: 51 VNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWG 110
+NW ++ + LR+ LK+ +H+F GFK + +++ K +KI + KE+SV+GWNWG
Sbjct: 50 MNWIRVARGYELRVTLKDNVIHKFDGFKNDDFEELRDALKLLYKIILEVKEISVKGWNWG 109
Query: 111 GTKFIGNVLSFDVNNTTAFEIPL-RDVSQCTTGKNEVTVEF----HP-----NDEAAESL 160
F G+ L+F V N FE+PL + ++ GKNEV + F P N + + L
Sbjct: 110 KADFQGSNLNFTVGNKMMFELPLAQAIATNKPGKNEVAINFVDPGQPAPDGINPKEVDEL 169
Query: 161 IEMRFYIPTNEIAGDTDP--------------VEA---FKDSVMNQASVINATGDAIAVF 203
++ FY+P +A +T V A F ++V ++ T + I F
Sbjct: 170 MDCTFYVP-GTVAKETTTEDNSGGEQEDEEEEVNADMVFYETVKSKLEFSQMTTENIVQF 228
Query: 204 NEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPP 263
EI LTPRGRY+I ++ F +L GKT+DYKI S ++++F L D FVI LDPP
Sbjct: 229 QEILSLTPRGRYNIDMYQDFLRLRGKTYDYKILYSNIVQLFLLLKPDDVHVLFVIGLDPP 288
Query: 264 IKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIV 323
++QGQT+Y FL F ++E +++L + L+EKYE KL K PTYEV++ + + +
Sbjct: 289 LRQGQTKYPFLVFQFVREEEIDVDLNLEDSVLEEKYENKLQKHYDAPTYEVVSNVFRALT 348
Query: 324 NRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARS 383
RK+ ++R H G A+ CS KA G++YPLE+ +FI KPP I EI V F+R
Sbjct: 349 GRKVISTSTYRSHHGAYAMKCSMKANEGFLYPLEKSLLFIPKPPTFIPINEIGVVTFSRV 408
Query: 384 G---GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVK 427
G GS+R+FD + + SG FSSI +EEY + D+++++K+++K
Sbjct: 409 GQSSGSSRTFDMKFRMTSGTDIQFSSINREEYANIEDYLKQRKIKIK 455
>gi|440794455|gb|ELR15616.1| hypothetical protein ACA1_164980, partial [Acanthamoeba castellanii
str. Neff]
Length = 463
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 244/441 (55%), Gaps = 39/441 (8%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
L+FQ +S + A G +KI I +K+K GK I G DL W + ++ L++
Sbjct: 9 LQFQNISLGGKVAGSSGIMKINASGIGWKSK-AGKSVAIMGTDLVKAEWIPIGKSFQLKL 67
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
+K GS +F GF++ +++ SFF NFK+D+ E + G NWG G + F V
Sbjct: 68 TVKGGSNFKFNGFQQANHNELKSFFDANFKLDLTRLEYNTSGRNWGDIDVRGPGMMFQVG 127
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAA----ESLIEMRFYIPTNEIAGDTDPVE 180
+ AFE+P DV+QC KNEVT+EFH +D +A ESL+E+R Y P + GD D E
Sbjct: 128 DGPAFEVPFTDVAQCVLQKNEVTLEFHQDDTSASVDSESLVELRLYFPPD---GDMDADE 184
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F V+++A V++ TG +A F +I T+DYKI S++
Sbjct: 185 -FHKLVLDKADVVSTTGGGLATFPQI----------------------PTYDYKIMYSSI 221
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
+F LP D R F+ISLDPPI+QG TRY L L F++ ++++ E E K E
Sbjct: 222 SHIFELPKPDDRHVCFMISLDPPIRQGGTRYPHLVLQFDKAAKIDLQVALKEMEGKLPKE 281
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
+L++E+SG Y+V ++++ + +KITVPG++ H AV CS KA GY+YP++R F
Sbjct: 282 SRLEEEMSGKVYKVFRRVVRELTQKKITVPGTYLSHHQAPAVKCSVKANDGYLYPMDRCF 341
Query: 361 IFIHKPPIHIRFEEIATVNFARSG--------GSTRSFDFEIELKSGVLHTFSSIEKEEY 412
IFIHKPP +IR+ +I V FAR G +R+FD + K G F+ +++ E+
Sbjct: 342 IFIHKPPTYIRYSDITVVEFARVSSEKQGDIQGGSRTFDLVVYTKGGNDVQFTGMQRTEF 401
Query: 413 GKLFDFIREKKLRVKNTGKGE 433
L +FI+ K +++K E
Sbjct: 402 KALVNFIQSKGIKIKRISHME 422
>gi|343425699|emb|CBQ69233.1| probable POB3-protein that binds to DNA polymerase I [Sporisorium
reilianum SRZ2]
Length = 557
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 238/461 (51%), Gaps = 51/461 (11%)
Query: 19 CPGKLKITDQNIVFK-NKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK---------- 67
PGKL+++ + +K + G I + W ++ + L I L
Sbjct: 17 TPGKLRMSQGGLGWKPSVGEGSTITIPADQMASFQWIRVARNYQLAITLNKDRDTPSSAQ 76
Query: 68 -NGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNT 126
N F GF + D++ S + F + KE+S RGWNWG K + + F V +
Sbjct: 77 TNPRRTNFDGFVRDDYDRLSSHIRDYFNKSLETKEVSTRGWNWGQAKISNHDVQFLVRDK 136
Query: 127 TAFEIPLRDVSQCTTGKNEVTVEF------HPNDEAAES--------------LIEMRFY 166
AFE+PL ++ K EV++EF P S L+EMR Y
Sbjct: 137 LAFELPLSHLANSNIAKTEVSMEFLNPEQQQPGANTGSSDANGTKSRRSKGDQLVEMRLY 196
Query: 167 IPTNEIA----------------GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLT 210
+P + EAF +++ ++A + GD+I VF E+ LT
Sbjct: 197 VPGQASKDDASDAGSAADADDNNNEETAAEAFHEALKSKADIGQVAGDSIVVFKEVLVLT 256
Query: 211 PRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTR 270
PRGRYDI +FN+F +L GKT+DYKI S++ ++F LP D VI LDPPI+QGQTR
Sbjct: 257 PRGRYDIDVFNTFIRLRGKTYDYKILYSSMNKLFLLPKADEIHVMLVIGLDPPIRQGQTR 316
Query: 271 YHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVP 330
Y +L L F ++E + EL EQ ++EKY+GKL K PT+ ++ I KV+ +K+ P
Sbjct: 317 YPYLVLQFPREEEMDAELNLDEQTIQEKYDGKLKKRYEEPTFRIVTNIFKVLSGQKVATP 376
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---ST 387
F +G +++ C+ KAA G +YPLE+ +++ K P+++ + EI +R GG S+
Sbjct: 377 TDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVASS 436
Query: 388 RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
++FD + KSG HTF SI +EE +L ++ ++K+R+KN
Sbjct: 437 KTFDLHVATKSGTDHTFQSISREELDRLKAWLADRKVRIKN 477
>gi|453089399|gb|EMF17439.1| SSrecog-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 570
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 278/539 (51%), Gaps = 66/539 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK ++ + + +K G+ ++ + W + + ++I+ +N + + GF++
Sbjct: 15 PGKCRLAESGLGWK-PSGGQTFTLDKGEFLSAQWSRAARGYEMKIYARNQGVVQLDGFRQ 73
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ + I FK + + KE ++RGWNWG + N L+F+V N AFEIP ++S
Sbjct: 74 EDFETIQKCFKVWYGVPFEHKEHALRGWNWGKNELGRNELAFNVRNQPAFEIPYTEISNT 133
Query: 140 T-TGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNE----- 171
GKNEV VEF P D AA+ L E+RFYIP E
Sbjct: 134 NLAGKNEVAVEFSLPADGEDTGTNGHLGGARAKGKKMGGAADQLTEIRFYIPGTEKRAKG 193
Query: 172 ------------IAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
A + F +++MN+A + GD A F +I LTPRGR+DI +
Sbjct: 194 DDEDGEDAEDGEEAEQQNAANLFYETLMNKAEIGEVAGDTYATFQDILHLTPRGRFDIDL 253
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI + R F LP D I LDPP++QGQTRY FL + F
Sbjct: 254 YESSFRLRGKTYDYKISYESAKRFFLLPKPDDMHQLLCIGLDPPLRQGQTRYPFLVMQFK 313
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
+DE +EL ++++L +KY GKL + P V++KI + +++ P F H
Sbjct: 314 KDEEVAIELNMTDEQL-QKYSGKLSPKYEAPIGNVVSKIFHGLTGKRLIQPSDQFVSHHQ 372
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
S V CS KA G+++ L++ F+F+ KP +I F+ I++V +R GG ++R+FD +
Sbjct: 373 MSGVKCSIKANEGHLFCLDKAFLFVPKPATYISFDNISSVTMSRVGGAVSASRTFDIAVT 432
Query: 396 LKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE------DFGSSDDEKE 449
LKSG H FS+I +EE L F + K ++ KN G+ D SS+DE
Sbjct: 433 LKSGSDHQFSNINREEQQPLESFFKAKGIKTKNEMDGDTGMLAAALANDPDLVSSEDE-- 490
Query: 450 PDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
E +RD +++DES DEDF D +ESDVAEE+DS+ +DSD SDA
Sbjct: 491 ----------EVVQRDRGSADEDDESVDEDFQAD-SESDVAEEFDSD-AKSDSDAGSDA 537
>gi|171686954|ref|XP_001908418.1| hypothetical protein [Podospora anserina S mat+]
gi|170943438|emb|CAP69091.1| unnamed protein product [Podospora anserina S mat+]
Length = 567
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 272/518 (52%), Gaps = 54/518 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ W + + ++I +N + + GF++
Sbjct: 19 GKCRFAETGLGWKPVGGGDTFTLDQGNIGGAQWSRAAKGYEIKILQRNSGIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKNWYSTNLENKEHSLRGWNWGKAEFGKAELTFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPND------------------EAAESLIEMRFYIPTNEI-----AGDT 176
G+NE+ VEF + + ++EMRFYIP GD
Sbjct: 139 LAGRNEIAVEFAVGEGGKAGQNGATPGKGKKASAGKDQMVEMRFYIPGTTTRKEAEGGDA 198
Query: 177 ---------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
+ V F D+++ +A + + GD IA F ++ LTPRGR+DI ++++ F+L
Sbjct: 199 GSDADEEEKNAVTLFYDTLIEKAEIGESAGDTIATFLDVLHLTPRGRFDIDMYDTSFRLR 258
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI + + LP D I LDPP++QGQTRY FL + F DE ++
Sbjct: 259 GKTYDYKIQYEAIKKFMVLPKPDEVHYLLCIGLDPPLRQGQTRYPFLVMQFKTDEEVTLD 318
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSY 346
L E++L EKY+GKL+ P + V+A+I + + +KI P +F+ H S + CS
Sbjct: 319 LNLPEEDLNEKYKGKLESHYEQPLHSVVAQIFRGLAGKKILSPAKNFQTHRAQSGIKCSI 378
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLHT 403
KA+ G++Y LE+ F+F+ KP +I +++ ++ F+R GG+ + FD + +K G
Sbjct: 379 KASEGFLYCLEKAFMFVPKPATYIAYDQTQSITFSRVGGAVSALSTFDITVHMKGGGNSQ 438
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARVK 458
FS+I +E+ L DF + K LRVKN ED SSD+E V
Sbjct: 439 FSNINREDLKGLEDFFQYKGLRVKNEIDEDANMLAAAMRAEDMASSDEE---------VV 489
Query: 459 REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
+ A+R ++++ES DEDF D ++SDVAEEYDSN
Sbjct: 490 QNKADRGSA--DEDEESVDEDFQAD-SDSDVAEEYDSN 524
>gi|413944647|gb|AFW77296.1| hypothetical protein ZEAMMB73_043348 [Zea mays]
Length = 605
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 329/654 (50%), Gaps = 72/654 (11%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M +A F +S RG PG+ K+ + +K + GK+ +++ D+ V W ++ ++
Sbjct: 1 MADAHHFNNISLGGRGGGHPGQFKLYSGGLAWKKQGGGKIIEVDKGDITNVAWMRIPKSY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K G +RF GF+E ++ + +F + + I EK+LSV G NWGG + GN+L
Sbjct: 61 QLSVGTKEGLCYRFFGFREQDVSNLTNFIEKSTGITPEEKQLSVSGQNWGGIQINGNMLC 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F+V + AFE+ L DV+Q GK +V +EFH +D +SL+++ F++PT+ +
Sbjct: 121 FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFI 180
Query: 174 GDTDPVEAFKDSVMNQASVINATGD---AIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
GD A SV I+ G A+ F+ I LTPRGRY +++ SF +L G+
Sbjct: 181 GDEHRTSAQAISVE-----IDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQGQA 235
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
D+KI S++LR+F LP F + E EL
Sbjct: 236 NDFKIQYSSILRLFVLPK-----------------------------FETEAVVERELTL 266
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
S + L EKY+ +L+ G +EV +K+++ + + K+T P +FR AV S KA
Sbjct: 267 SGEILAEKYKDRLESSYRGLIHEVFSKVLRGLSSAKVTRPSTFRSCLDGYAVKSSLKAED 326
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFS 405
G +YPLE+GF F+ KPP I EEI V F R G S+ FD ++L + F
Sbjct: 327 GLLYPLEKGFFFLPKPPTLIPHEEIEYVEFERHGAGGASISSHYFDLLVKLTNDQELLFR 386
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGE-KPNYKEDFGSSDDEKEPDAYLARVKREAAER 464
+I++ EY LF+FI K L++ N G G+ + + S D+ D +L R+K +A
Sbjct: 387 NIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAGNE 446
Query: 465 DDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSD-EDSDASEGTKKKKKEKSRKT 523
+ + ++ E VA++ DS DSD E SDAS +KEK K
Sbjct: 447 ESD---------------EEDEDFVADKDDSGSPTDDSDAEGSDAS--MSGGEKEKPSKK 489
Query: 524 ITISEKPRKSKKDK----ESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI 579
S KP KK K E S +KKKD NAPK+ ++ +M + R IK NP +
Sbjct: 490 EASSSKPPVKKKQKSGPDEGSQKKKPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPEL 549
Query: 580 SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
+ TEIAKK GE W+ ++++E+ Y E+ K+ Y E AY+ + Q S G
Sbjct: 550 ATTEIAKKLGERWQKMTAEERQPYVEQSQVDKQRYAEESAAYRGAAAQQGSGAG 603
>gi|67541034|ref|XP_664291.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4]
gi|40738440|gb|EAA57630.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4]
Length = 589
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 284/579 (49%), Gaps = 82/579 (14%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF +
Sbjct: 21 PGKCKLAETGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQ 80
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F L+F+V N AFE+P ++S
Sbjct: 81 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELAFNVQNRPAFEVPYSEISNT 140
Query: 140 T-TGKNEVTVEFH----PNDE---------------AAESLIEMRFYIPT------NEIA 173
GKNEV VE PN + L+EMRFYIP N I
Sbjct: 141 NLAGKNEVAVELSLSVDPNGSKPAGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTENGIK 200
Query: 174 GDT----------------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
G+ + F + +M +A + + GD A F ++ LTPRGR+DI
Sbjct: 201 GENADEKNGGEGEENGEEQNAANLFYELLMEKAEIGDVAGDTFATFLDVLHLTPRGRFDI 260
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ S F+L GKT+DYKI S++ + F LP D V+ L+PP++QGQTRY FL +
Sbjct: 261 DMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLEPPLRQGQTRYPFLVMQ 320
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGH 336
DE +EL +E+ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 321 LKLDEEISLELNMTEELLETRYKDKLEPRYEEPIHQVITKIFRGLSGKKVIMPSKDFVSH 380
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
G S V CS KA G +Y L++ IF+ KP +I+ E +A V +R GG ++R+FD
Sbjct: 381 HGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQMENVAVVTMSRVGGAISASRTFDIT 440
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA 452
+ LK+G+ H FS+I +EE L +F + K +R+KN SDD +A
Sbjct: 441 VSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRIKNE-------------MSDD---TNA 484
Query: 453 YLARVKREAAERDDEDDEDEDESTDED--------------FNPDQAESDVAEEYDSNPT 498
+A A + DD DED D F D ++SDVAEEYDS
Sbjct: 485 LIA----AALDNDDMMSSDEDGGGRPDRGSADEDEESVDEDFQAD-SDSDVAEEYDSAHE 539
Query: 499 PTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
+ S D++ + + E +SE+ R KK K
Sbjct: 540 SSGSGSDAEMDDASDAGVDEDEDADADMSEEERPKKKSK 578
>gi|169765954|ref|XP_001817448.1| FACT complex subunit pob3 [Aspergillus oryzae RIB40]
gi|110287790|sp|Q2USL9.1|POB3_ASPOR RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|83765303|dbj|BAE55446.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 576
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 290/573 (50%), Gaps = 71/573 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 15 PGKCKLAESGLGWKPSGEGETFTLDSSNVGAAQWSRAAKGFELKILSRSSGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 75 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELSFNVQNRPAFEVPYSEISNT 134
Query: 140 T-TGKNEVTVEFHPNDEAAES---------------------LIEMRFYIPTNEIAGD-- 175
GKNEV VE N + A++ L+EMRFYIP + +
Sbjct: 135 NLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASGPDELVEMRFYIPGTVMKTEKG 194
Query: 176 -------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
+ F + +M +A + + GD A F ++ LTPRGR+D
Sbjct: 195 IKEENGKEENGEEEEEGEEQNAANLFYEMLMEKAEIGDVAGDTFATFLDVLHLTPRGRFD 254
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
I ++ S F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 255 IDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVM 314
Query: 277 LFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRG 335
DE +EL +++ ++ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 315 QLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVS 374
Query: 336 HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDF 392
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 375 HHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVENIAIITMSRVGGAVSASRTFDI 434
Query: 393 EIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN------TGKGEKPNYKEDFGSSD 445
+ LK+G+ H FS+I +EE L +F + K +R KN + GSSD
Sbjct: 435 TVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDAGALLAAALDNDVMGSSD 494
Query: 446 DEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED 505
DE R R +A+ D+E +++ ++ ++ESDVAEEYDS + S D
Sbjct: 495 DEG------VRADRGSADEDEESIDEDFQA--------ESESDVAEEYDSAHESSGSGSD 540
Query: 506 S---DASEGTKKKKKEKSRKTITISEKPRKSKK 535
+ DAS+G + ++ E+P+K K
Sbjct: 541 AEMNDASDGGGDDDDDDEDVDMSEEERPKKKSK 573
>gi|357528835|sp|Q5AYE3.2|POB3_EMENI RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|259480271|tpe|CBF71249.1| TPA: FACT complex subunit pob3 (Facilitates chromatin transcription
complex subunit pob3)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AYE3] [Aspergillus
nidulans FGSC A4]
Length = 575
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 284/579 (49%), Gaps = 82/579 (14%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF +
Sbjct: 15 PGKCKLAETGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F L+F+V N AFE+P ++S
Sbjct: 75 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELAFNVQNRPAFEVPYSEISNT 134
Query: 140 T-TGKNEVTVEFH----PNDE---------------AAESLIEMRFYIPT------NEIA 173
GKNEV VE PN + L+EMRFYIP N I
Sbjct: 135 NLAGKNEVAVELSLSVDPNGSKPAGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTENGIK 194
Query: 174 GDT----------------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
G+ + F + +M +A + + GD A F ++ LTPRGR+DI
Sbjct: 195 GENADEKNGGEGEENGEEQNAANLFYELLMEKAEIGDVAGDTFATFLDVLHLTPRGRFDI 254
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ S F+L GKT+DYKI S++ + F LP D V+ L+PP++QGQTRY FL +
Sbjct: 255 DMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLEPPLRQGQTRYPFLVMQ 314
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGH 336
DE +EL +E+ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 315 LKLDEEISLELNMTEELLETRYKDKLEPRYEEPIHQVITKIFRGLSGKKVIMPSKDFVSH 374
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
G S V CS KA G +Y L++ IF+ KP +I+ E +A V +R GG ++R+FD
Sbjct: 375 HGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQMENVAVVTMSRVGGAISASRTFDIT 434
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA 452
+ LK+G+ H FS+I +EE L +F + K +R+KN SDD +A
Sbjct: 435 VSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRIKNE-------------MSDD---TNA 478
Query: 453 YLARVKREAAERDDEDDEDEDESTDED--------------FNPDQAESDVAEEYDSNPT 498
+A A + DD DED D F D ++SDVAEEYDS
Sbjct: 479 LIA----AALDNDDMMSSDEDGGGRPDRGSADEDEESVDEDFQAD-SDSDVAEEYDSAHE 533
Query: 499 PTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
+ S D++ + + E +SE+ R KK K
Sbjct: 534 SSGSGSDAEMDDASDAGVDEDEDADADMSEEERPKKKSK 572
>gi|317139346|ref|XP_003189156.1| FACT complex subunit pob3 [Aspergillus oryzae RIB40]
Length = 585
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 290/573 (50%), Gaps = 71/573 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 24 PGKCKLAESGLGWKPSGEGETFTLDSSNVGAAQWSRAAKGFELKILSRSSGVIQLDGFDQ 83
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 84 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELSFNVQNRPAFEVPYSEISNT 143
Query: 140 T-TGKNEVTVEFHPNDEAAES---------------------LIEMRFYIPTNEIAGD-- 175
GKNEV VE N + A++ L+EMRFYIP + +
Sbjct: 144 NLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASGPDELVEMRFYIPGTVMKTEKG 203
Query: 176 -------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
+ F + +M +A + + GD A F ++ LTPRGR+D
Sbjct: 204 IKEENGKEENGEEEEEGEEQNAANLFYEMLMEKAEIGDVAGDTFATFLDVLHLTPRGRFD 263
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
I ++ S F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 264 IDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVM 323
Query: 277 LFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRG 335
DE +EL +++ ++ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 324 QLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVS 383
Query: 336 HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDF 392
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 384 HHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVENIAIITMSRVGGAVSASRTFDI 443
Query: 393 EIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN------TGKGEKPNYKEDFGSSD 445
+ LK+G+ H FS+I +EE L +F + K +R KN + GSSD
Sbjct: 444 TVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDAGALLAAALDNDVMGSSD 503
Query: 446 DEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED 505
DE R R +A+ D+E +++ ++ ++ESDVAEEYDS + S D
Sbjct: 504 DEG------VRADRGSADEDEESIDEDFQA--------ESESDVAEEYDSAHESSGSGSD 549
Query: 506 S---DASEGTKKKKKEKSRKTITISEKPRKSKK 535
+ DAS+G + ++ E+P+K K
Sbjct: 550 AEMNDASDGGGDDDDDDEDVDMSEEERPKKKSK 582
>gi|367012760|ref|XP_003680880.1| hypothetical protein TDEL_0D00850 [Torulaspora delbrueckii]
gi|359748540|emb|CCE91669.1| hypothetical protein TDEL_0D00850 [Torulaspora delbrueckii]
Length = 540
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 283/536 (52%), Gaps = 53/536 (9%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I +N +
Sbjct: 17 GRFRIADSGLGWKATASGGSSANQAKAPFLLPATELYTVQWSRGCRGYELKINTRNQGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F + + KE S+RGWNWG N + F VN +FE+P
Sbjct: 77 QLDGFSQEDFNLIKNDFHRRFNVQIELKEHSLRGWNWGKADLARNEMIFAVNGKPSFEVP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP------------------- 168
++ T KNEV +EF+ DE A + ++EMRFYIP
Sbjct: 137 YARINNTNLTSKNEVAIEFNIQDEQYQPAGDEMVEMRFYIPGQVEDENEDEMPKKEDGED 196
Query: 169 ---TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQ 225
T E EAF + + +A V GD+I F ++ TPRGRYDI I+ + +
Sbjct: 197 VEMTKEPKEKKTMAEAFHEELKEKADVGEVAGDSIVSFQDVFFATPRGRYDIDIYKNSIR 256
Query: 226 LHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSE 285
L GKT++YK+ + R+ +LP D + V+S++PP++QGQT Y FL + F +DE +E
Sbjct: 257 LRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLSIEPPLRQGQTTYPFLVMQFQKDEETE 316
Query: 286 MELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCS 345
++L +++ Y+ KL K+ T+ V++ ++K + +++ VPG+++ AV+CS
Sbjct: 317 VQLNLEDEDFDANYKEKLMKQYDAKTHIVISHVLKGLTGKRVIVPGAYKSKYDQCAVSCS 376
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-L 401
YKA GY+YPL+ F F+ KP ++I F ++++VN +R+G S+++FD EI L+S
Sbjct: 377 YKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTSTSSKTFDLEILLRSNRGS 436
Query: 402 HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREA 461
TF++I KEE L F++ K LRVKN K + + GS D+++ + A
Sbjct: 437 TTFANISKEEQQLLEQFLKSKNLRVKNEDKEAQERLQSALGSDSDDEDV------IMGSA 490
Query: 462 AERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKK 517
AE ++ DE+ S+++D D+AEE++S+ +D + + SE KK K
Sbjct: 491 AEDEESFDEEFHASSEDD--------DIAEEFNSDAASSDEEGEGSGSERPSKKAK 538
>gi|212539794|ref|XP_002150052.1| structure-specific recognition protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210067351|gb|EEA21443.1| structure-specific recognition protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 576
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 271/532 (50%), Gaps = 71/532 (13%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I + + + GF +
Sbjct: 15 PGKCKLAESGMGWRPSGGGDTFTLDSSNIGAAQWSRAAKGFELKILSRTSGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + + + ++E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 75 EDFERLSKAFKVWYGVAIEQREHAIRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNT 134
Query: 140 -TTGKNEVTVEFH-PNDEAA-------------------ESLIEMRFYIPTNEIA----- 173
GKNEV VEF P DE A + L+EMRFYIP +
Sbjct: 135 NLAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGPDELVEMRFYIPGTALKKEKAE 194
Query: 174 GD--------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRG 213
GD + F +++M++A + + GD A F ++ LTPRG
Sbjct: 195 GDGVKKEGSEEEGEAEGEELEEQNAANLFYETLMDKAEIGDVAGDTYATFLDVLHLTPRG 254
Query: 214 RYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHF 273
R+DI ++ + F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY F
Sbjct: 255 RFDIDMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEMHTLIVLGLDPPLRQGQTRYPF 314
Query: 274 LTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS- 332
L + DE +EL +E+ L+E+Y+ KL+ P ++V+ KI + + +K+ +P
Sbjct: 315 LVMQLKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIHQVITKIFRGLSGKKVIMPSKD 374
Query: 333 FRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRS 389
F H G S V CS KA G +Y L++ +F+ KP +++ E I+ V +R GG ++R+
Sbjct: 375 FVSHHGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQIENISVVTMSRVGGAISASRT 434
Query: 390 FDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGS 443
FD + LK G+ H FS+I +EE L +F + K +R+KN + K + D S
Sbjct: 435 FDITVSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIKNEMVDDSAALIKAALENDDLS 494
Query: 444 SDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
SDD+ PD A E+ + D + D D SDVAEEYDS
Sbjct: 495 SDDDVRPDRGSADEDEESVDEDFQADSD---------------SDVAEEYDS 531
>gi|367050952|ref|XP_003655855.1| FACT complex subunit POB-3-like protein [Thielavia terrestris NRRL
8126]
gi|347003119|gb|AEO69519.1| FACT complex subunit POB-3-like protein [Thielavia terrestris NRRL
8126]
Length = 570
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 238/447 (53%), Gaps = 39/447 (8%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ + W + + ++I L+N + + GF++
Sbjct: 19 GKCRFAENGLGWKPAGGGDTFTLDQSSIGGAQWSRAARGYEVKILLRNSGIVQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 79 DYERLGKIFKNWYSTNLENKEHSMRGWNWGKAEFGKAELSFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPNDEAAES-------------------LIEMRFYIPT---------NE 171
G+NE+ +EF + S L+EMRFYIP E
Sbjct: 139 LAGRNEIAIEFAVGEGGRASGQNGAGPGKGKKASAGRDQLVEMRFYIPGTTTRKEAEGGE 198
Query: 172 IAGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQL 226
D D V F D+++ +A + GDAIA F ++ LTPRGR+DI ++++ F+L
Sbjct: 199 AGSDADEEEKNAVTLFYDTLIEKAEIGETAGDAIATFLDVLHLTPRGRFDIDMYDASFRL 258
Query: 227 HGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEM 286
GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F QDE +
Sbjct: 259 RGKTYDYKIQYEAIKKFMVLPKPDDLHFMLCIGLDPPLRQGQTRYPFIVMQFKQDEEVTL 318
Query: 287 ELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCS 345
+L S++EL KY+ +L P ++V+A I K + N+KIT P F H + CS
Sbjct: 319 DLNLSDEELNGKYKDRLQAHYEQPLHQVVAFIFKGLANKKITAPAKDFTTHRQQYGIKCS 378
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLH 402
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ ++FD + +KSG
Sbjct: 379 IKASEGFLYLLEKAFMFVPKPATYISYEQTQSITFSRVGGAVTALQTFDITVHMKSGAGS 438
Query: 403 T-FSSIEKEEYGKLFDFIREKKLRVKN 428
+ FS+I +EE L DF + K LRVKN
Sbjct: 439 SQFSNINREELKALEDFFKLKGLRVKN 465
>gi|134075841|emb|CAL00220.1| unnamed protein product [Aspergillus niger]
Length = 570
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 279/542 (51%), Gaps = 64/542 (11%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 16 GKCKLAESGLGWKPSGGGETFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQE 75
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + I++ +E ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 76 DFERLSKAFKIWYGINMESREHALRGWNWGKAEFTKAELSFNVQNRPAFEIPYSEISNTN 135
Query: 140 TTGKNEVTVEFHPNDEAAE--------------------SLIEMRFYIPTNEIAGD---- 175
GKNEV VEF E E L+EMRFYIP + +
Sbjct: 136 LAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGPDELVEMRFYIPGTAVKTEKGIK 195
Query: 176 --------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
+ F + +M++A + + GD A F ++ LTPRGR+
Sbjct: 196 EENAENADEENGAEEEEGEEQNAANLFYEMLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 255
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
DI ++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL
Sbjct: 256 DIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLV 315
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFR 334
+ DE +EL +++ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 316 MQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFV 375
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 376 SHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQIENIAIITMSRVGGAISASRTFD 435
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
+ LK+G+ H FS+I +EE L +F + K +R KN + +D GSSDDE
Sbjct: 436 ITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDVSLDNDDMGSSDDEG-- 493
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE 510
R R +A+ D+E +++ E+ +++SDVAEEYDS + S D++ +
Sbjct: 494 ----VRADRGSADEDEESIDEDFEA--------ESDSDVAEEYDSAHESSGSASDAEMGD 541
Query: 511 GT 512
+
Sbjct: 542 AS 543
>gi|85078552|ref|XP_956186.1| hypothetical protein NCU11168 [Neurospora crassa OR74A]
gi|74613683|sp|Q7RWW0.1|POB3_NEUCR RecName: Full=FACT complex subunit pob-3; AltName: Full=Facilitates
chromatin transcription complex subunit pob-3
gi|28917238|gb|EAA26950.1| hypothetical protein NCU11168 [Neurospora crassa OR74A]
Length = 565
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 273/519 (52%), Gaps = 55/519 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G+ ++ ++ W + + ++I L++ + + GF +
Sbjct: 19 GKSRFAENGLGWKPAGGGEAFTLDSSNIGGAQWSRAARGYEVKILLRSSGVVQLDGFHQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + +++ KE S+RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKNWYSVNLENKEHSLRGWNWGKAEFSKAELTFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPND------------------EAAESLIEMRFYIPT---------NEI 172
G+NE+ VEF ND + L+E+RFYIP E
Sbjct: 139 LAGRNEIAVEFAGNDGGKSNGHSGTGGKGKKASAGKDQLVEVRFYIPGTTTRKEAEGGEA 198
Query: 173 AGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
D D V F D+++ +A + GD IA F ++ LTPRGR+DI ++++ F+L
Sbjct: 199 GSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDASFRLR 258
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F DE ++
Sbjct: 259 GKTYDYKIQYDAIKKFMVLPKPDDLHFLLCIGLDPPLRQGQTRYPFVVMQFKADEEVTLD 318
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSY 346
L +E+EL KY+ KL P ++V+A I K + N+K+T P F H + CS
Sbjct: 319 LNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANKKVTTPAKDFTTHRQQYGIKCSI 378
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLHT 403
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ + FD + +K+G +
Sbjct: 379 KASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVGGAVSALSTFDITVHMKNGAGSS 438
Query: 404 -FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
FS+I +E+ L +F + K LRVKN T +D SSD+E A +
Sbjct: 439 QFSNINREDLKALEEFFKLKGLRVKNEIDDDTNLIAAALGDDDMASSDEE----AVGPKA 494
Query: 458 KREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ ++ ++ESDVAEEYDSN
Sbjct: 495 DRGSADEDEESVDEDFQA--------ESESDVAEEYDSN 525
>gi|336469670|gb|EGO57832.1| hypothetical protein NEUTE1DRAFT_146347 [Neurospora tetrasperma
FGSC 2508]
gi|350290673|gb|EGZ71887.1| FACT complex subunit pob-3 [Neurospora tetrasperma FGSC 2509]
Length = 565
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 273/519 (52%), Gaps = 55/519 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G+ ++ ++ W + + ++I L++ + + GF +
Sbjct: 19 GKSRFAENGLGWKPAGGGEAFTLDSSNIGGAQWSRAARGYEVKILLRSSGVVQLDGFHQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + +++ KE S+RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKNWYSVNLENKEHSLRGWNWGKAEFSKAELTFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPND------------------EAAESLIEMRFYIPT---------NEI 172
G+NE+ VEF ND + L+E+RFYIP E
Sbjct: 139 LAGRNEIAVEFAGNDGGKSNGHSGTGGKGKKASAGKDQLVEVRFYIPGTTTRKEAEGGEA 198
Query: 173 AGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
D D V F D+++ +A + GD IA F ++ LTPRGR+DI ++++ F+L
Sbjct: 199 GSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDASFRLR 258
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F DE ++
Sbjct: 259 GKTYDYKIQYDAIKKFMVLPKPDDLHFLLCIGLDPPLRQGQTRYPFVVMQFKADEEVTLD 318
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSY 346
L +E+EL KY+ KL P ++V+A I K + N+K+T P F H + CS
Sbjct: 319 LNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANKKVTTPAKDFTTHRQQYGIKCSI 378
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLHT 403
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ + FD + +K+G +
Sbjct: 379 KASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVGGAVSALSTFDITVHMKNGAGSS 438
Query: 404 -FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
FS+I +E+ L +F + K LRVKN T +D SSD+E A +
Sbjct: 439 QFSNINREDLKALEEFFKLKGLRVKNEIDDDTNLISAALGDDDMASSDEE----AVGPKA 494
Query: 458 KREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ ++ ++ESDVAEEYDSN
Sbjct: 495 DRGSADEDEESVDEDFQA--------ESESDVAEEYDSN 525
>gi|340905326|gb|EGS17694.1| hypothetical protein CTHT_0070340 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 571
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 238/445 (53%), Gaps = 36/445 (8%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK + + + +K G+ ++ ++ W + + ++I + + + GF++
Sbjct: 18 PGKCRFAENGLGWKPVGGGETFTLDVSNIGGAQWSRAARGYEVKILQRTSGVIQLDGFQQ 77
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N AFEIP +++
Sbjct: 78 EDYERLAKIFKNWYSTNLENKEHSLRGWNWGKAEFGKAELTFNVQNRPAFEIPYSEIANT 137
Query: 140 T-TGKNEVTVEFHPNDEAAES----------------LIEMRFYIPT---------NEIA 173
G+NE+ VEF P D S L+E+RFYIP E
Sbjct: 138 NLAGRNEIAVEFAPGDHGKSSQNGQVKSKKASASRDQLVEIRFYIPGTTTRKEAEGGEAG 197
Query: 174 GDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
D D V F D+++ +A + GD IA F ++ LTPRGR+DI ++++ F+L G
Sbjct: 198 SDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDTSFRLRG 257
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT+DYKI + + LP D I LDPP++QGQTRY F+ + F QDE ++L
Sbjct: 258 KTYDYKIQYEAIKKFMVLPKPDDLHFMLCIGLDPPLRQGQTRYPFIVMQFKQDEEVTLDL 317
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYK 347
SE+EL KY+ +L P ++V+ I K + N+K+T P F H G + CS K
Sbjct: 318 NLSEEELNGKYKDRLQAHYEQPAHQVVTYIFKGLANKKVTAPAKDFTTHRGHYGIKCSIK 377
Query: 348 AAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHT- 403
A+ G++Y LE+ F+F+ KP +I +E+ +V F+R GG+ +FD + +K+G +
Sbjct: 378 ASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAVSTLSTFDITVHMKNGQGSSQ 437
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKN 428
FS+I +EE L DF + K L+VKN
Sbjct: 438 FSNINREELKALEDFFKLKGLKVKN 462
>gi|242803641|ref|XP_002484216.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717561|gb|EED16982.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 572
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 270/540 (50%), Gaps = 92/540 (17%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + ++ G ++ ++ W + + L+I + + + GF +
Sbjct: 16 GKCKLAESGMGWRPSGGGDTFTLDSSNIGAAQWSRAAKGFELKILSRTSGVIQLDGFDQE 75
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + + + ++E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 76 DFERLSRAFKVWYGVAIEQREHAIRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTN 135
Query: 140 TTGKNEVTVEFH-PNDEAA-------------------ESLIEMRFYIPTNEIA-----G 174
GKNEV VEF P DE A + L+EMRFYIP + G
Sbjct: 136 LAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGPDELVEMRFYIPGTALKKEKAEG 195
Query: 175 D-----------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
D + F +++M++A + + GD A F ++ LTPRGR+DI
Sbjct: 196 DGAKKEGSEEEGEEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDI 255
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ + F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 256 DMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEMHTLIVLGLDPPLRQGQTRYPFLVMQ 315
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGH 336
DE +EL +E+ L+E+Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 316 LKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIHQVITKIFRGLSGKKVIMPSKDFVSH 375
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
G S V CS KA G +Y L++ +F+ KP +++ E I+ V +R GG ++R+FD
Sbjct: 376 HGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQIENISVVTMSRVGGAISASRTFDIT 435
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA 452
+ LK G+ H FS+I +EE L +F + K +R+KN DD
Sbjct: 436 VSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIKNE-------------MVDDS----- 477
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQ-----------------AESDVAEEYDS 495
A + + A E D D STDED PD+ ++SDVAEEYDS
Sbjct: 478 --AALIKAALEND-------DLSTDEDVRPDRGSADEDEESVDEDFHADSDSDVAEEYDS 528
>gi|296424504|ref|XP_002841788.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638036|emb|CAZ85979.1| unnamed protein product [Tuber melanosporum]
Length = 570
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 238/448 (53%), Gaps = 40/448 (8%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG+ + + ++ TG++ ++ +L W + + L++F + + + GF+
Sbjct: 19 PGRFRFAPSGMGWR-PTTGEIWKMANTELSTAQWSRAARGYELKLFTRTMGIVQLDGFEL 77
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
++D++ K +K+++ +E +++GWNWG +F + L F+V N AFEIP +VS
Sbjct: 78 DDLDRVKECLKAYYKVNLEHREHALKGWNWGKAEFSKSELYFNVANKPAFEIPFAEVSNS 137
Query: 140 -TTGKNEVTVEFHPNDEAA------------------ESLIEMRFYIPTNEIAGD----- 175
GKNEV VEF D + L+EMRFY+P GD
Sbjct: 138 NLAGKNEVAVEFATADAGGGGTNEAGNKKKKKAAAQLDQLVEMRFYVPGTVKKGDEEAGS 197
Query: 176 --------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
F D++ +A + GD A F +I LTPRGRYDI ++ S F+L
Sbjct: 198 DAEGEEKEMSAANLFYDTLKEKADIGEVAGDTYATFLDILFLTPRGRYDIDMYESSFRLR 257
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI V + F LP D N VI LDPP++QGQT+Y FL + F ++E E +
Sbjct: 258 GKTYDYKIQFENVKKFFLLPKPDDVHNMIVIGLDPPLRQGQTKYPFLVMQFKREEDMEFD 317
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSY 346
L +E L E+Y GKL P ++V+++I K + ++I P F H S V CS
Sbjct: 318 LNITEDLLNERYAGKLQMHYENPAHQVVSQIFKGLTGKRIITPSRDFSSHHQQSGVKCSL 377
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKS---GV 400
KA G+++ L++ FIF+ KP + I F++IA + +R GGS +R+FD + LKS G
Sbjct: 378 KANEGHLFCLDKAFIFVPKPAVFITFDKIAHITMSRVGGSVSASRTFDVTVSLKSSEGGG 437
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+ F++I +EE L DF + K LR+KN
Sbjct: 438 EYQFNNINREEQSSLEDFFKSKNLRIKN 465
>gi|388579023|gb|EIM19353.1| SSrecog-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 564
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 244/448 (54%), Gaps = 40/448 (8%)
Query: 19 CPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKN-GSLHRFAGF 77
PG L++ + +K+ + I D+ ++ W ++ + L+I LK+ F G
Sbjct: 15 TPGILRLQQGGLGWKS--ADNLVTIAADDISYMQWMRVARNFQLKIGLKSEKERQTFDGL 72
Query: 78 KETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVS 137
+ +++ K + + + +E+S RGWNWG T++ G+ LSF V+ T FEIP++ ++
Sbjct: 73 VRDDYERLSKTVKEFYGVTLETREISFRGWNWGRTEYRGSDLSFQVSGRTMFEIPVQKIA 132
Query: 138 QCTTG-KNEVTVEF-HPNDEA-------------AESLIEMRFYIPTNEIA----GDTD- 177
K EV++EF P A A+ L+EMRFYIP + A GD D
Sbjct: 133 NSNIASKTEVSLEFIDPTASAQGEPTSGPSSSRRADELVEMRFYIPNSSKARGFIGDNDD 192
Query: 178 --------------PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
+ F D + ++A + +GD + VFN+I +TPRGRY+I ++ +F
Sbjct: 193 DDSKSQKSDQEEQSVAQLFHDQIKDKAEIGKVSGDGLVVFNDILVVTPRGRYEIDMYPTF 252
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
+L GKT+DYKI S++ R+F LP D V+ LDPPI+QGQTRY ++T+ F +E
Sbjct: 253 IRLRGKTYDYKILYSSIKRLFVLPKTDDMHVLLVVGLDPPIRQGQTRYPYITMQFPNNEE 312
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVT 343
+ + E E++EKY +L K P Y+V+A++ + + + IT P +F+ + A+
Sbjct: 313 LDATINMEESEIQEKYGDRLQKHYDAPAYQVVAQVFRGLSGKDITTPKTFKSFSNQPAIK 372
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGV 400
C+ KA G +Y +E+ F+ K PI+I F +I + FAR GG S+R+FD I KSG
Sbjct: 373 CNVKANQGDLYVMEKSLFFVTKQPIYIPFSDIQSAQFARVGGAISSSRTFDLRIVQKSGT 432
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+ FS I +EE+ L +F KK++ KN
Sbjct: 433 ENVFSGINREEHEPLEEFFTNKKIKTKN 460
>gi|146324848|ref|XP_748973.2| structure-specific recognition protein [Aspergillus fumigatus
Af293]
gi|148887146|sp|Q4WGK6.2|POB3_ASPFU RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|129556629|gb|EAL86935.2| structure-specific recognition protein, putative [Aspergillus
fumigatus Af293]
gi|159123257|gb|EDP48377.1| structure-specific recognition protein, putative [Aspergillus
fumigatus A1163]
Length = 573
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 284/561 (50%), Gaps = 53/561 (9%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 18 PGKCKLAESGLGWRPSGGGETFTLDSNNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQ 77
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 78 EDFERLSKAFKIWYGINVENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNT 137
Query: 140 T-TGKNEVTVEFHPNDEA--------------------AESLIEMRFYIPTNEIAGD--- 175
GKNEV VEF + + L+EMRFYIP + +
Sbjct: 138 NLAGKNEVAVEFALTSDGDANAQPSGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTEKGI 197
Query: 176 ----------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ F +++M +A + + GD A F ++ LTPRGR+DI +
Sbjct: 198 KTENDENGEEEEEGEEQNAANLFYETLMEKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 257
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 258 YESSFRLRGKTYDYKIQYASIKKFFLLPKNDEMHTLIVLGLDPPLRQGQTRYPFLVMQLK 317
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
DE +EL +E+ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F H G
Sbjct: 318 LDEEISLELNMTEELLESRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVSHHG 377
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
S V CS KA G +Y L++ IF+ KP +++ E IA + +R GG ++R+FD +
Sbjct: 378 HSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENIAVITMSRVGGAVSASRTFDITVT 437
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK+G+ H FS+I +EE L +F + K +R KN + +DD D
Sbjct: 438 LKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDTSALIAAALDNDDMMSSDEDG 497
Query: 455 ARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKK 514
R R +A+ D+E +++ ++ ++ESDVAEE+DS + S D++ + +
Sbjct: 498 GRADRGSADEDEESVDEDFQA--------ESESDVAEEFDSEHESSGSASDAEMDDASDA 549
Query: 515 KKKEKSRKTITISEKPRKSKK 535
E+ E+P+K K
Sbjct: 550 GDDEEDVDMSEEEERPKKKSK 570
>gi|367026844|ref|XP_003662706.1| POB3-like protein [Myceliophthora thermophila ATCC 42464]
gi|347009975|gb|AEO57461.1| POB3-like protein [Myceliophthora thermophila ATCC 42464]
Length = 570
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 267/520 (51%), Gaps = 56/520 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ W + + ++I +N + + GFK
Sbjct: 19 GKCRFAENGLGWKPAGGGDTFTLDASNIGGAQWSRAARGYEVKILQRNTGVIQLDGFKLE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + ++ KE S+RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKNWYSANLENKEHSLRGWNWGKAEFGKAELTFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPND-------------------EAAESLIEMRFYIP---------TNE 171
G+NE+ VEF D + L EMRFYIP E
Sbjct: 139 LAGRNEIAVEFSVADTGKSNGQNGATPGKGRKAAAGKDQLTEMRFYIPGTTTRKEAEGGE 198
Query: 172 IAGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQL 226
D D V F D+++ +A + GD IA F ++ LTPRGR+DI ++++ F+L
Sbjct: 199 AGSDVDEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDASFRL 258
Query: 227 HGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEM 286
GKT+DYKI + + LP D I LDPP++QGQTRY FL + F QDE +
Sbjct: 259 RGKTYDYKIQYEAIKKFMVLPKPDDTHFMLCIGLDPPLRQGQTRYPFLVMQFKQDEEVTL 318
Query: 287 ELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCS 345
+L SE+EL KY+ +L P ++V+A I K + N+KIT P F H + CS
Sbjct: 319 DLNLSEEELNGKYKDRLQPHYEQPIHQVVAYIFKGLANKKITAPAKDFTTHRQQYGIKCS 378
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLH 402
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R G+ + FD + +KSG
Sbjct: 379 IKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVSGAVSALSTFDITVHMKSGAGS 438
Query: 403 T-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYK-----EDFGSSDDEKEPDAYLAR 456
+ FS+I +E+ L DF + K LRVKN E E SSD+E A+
Sbjct: 439 SQFSNINREDLKALEDFFKLKGLRVKNEIDEESTLMAAALRDEAMASSDEE----VVGAK 494
Query: 457 VKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ ++ ++ESDVAEEYDSN
Sbjct: 495 ADRGSADEDEESIDEDFQA--------ESESDVAEEYDSN 526
>gi|358058034|dbj|GAA96279.1| hypothetical protein E5Q_02945 [Mixia osmundae IAM 14324]
Length = 596
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 275/556 (49%), Gaps = 82/556 (14%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHR--FAG 76
G+L++ I +K K G K+ + ++ + W + +ALRI + F G
Sbjct: 20 GRLRLAGSGIGWKASKDGQDKLVTLQASEIKWTEWLRHARGYALRIGQVKSEQPKMVFQG 79
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F + + +++ + ++ + + ++LSVRGWNWG N L+F V AF +PL V
Sbjct: 80 FAKEDFERLKNTIMQHYSLTLEPRDLSVRGWNWGRADVQSNELAFIVAGKPAFAVPLSTV 139
Query: 137 SQCTTGKNEVTVEFH--------PN----DEAAES--------------LIEMRFYIPTN 170
S + KNEVT+EF PN D+ E+ ++EMR YIP +
Sbjct: 140 SNSSVQKNEVTLEFSRTLEDEDDPNKVKMDDPKEASKEAKRRRRALPDEMVEMRLYIPGS 199
Query: 171 EIAGDTDPV----------------------------------EAFKDSVMNQASVINAT 196
+ +AF D + ++A +
Sbjct: 200 AKSAARKAKKDKQAETGENGAEEEEEEEDEEEDEDLEDELAAAQAFHDLIKDKADIGQVV 259
Query: 197 GDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFF 256
GD + F EI C TPRG++DI ++ SF +L GKT+DYK+P ++ R+F LP D
Sbjct: 260 GDGLLTFPEILCTTPRGKFDIDLYGSFLRLRGKTYDYKLPYESIARIFLLPRPDEIHVQL 319
Query: 257 VISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMA 316
VI++DPP++QGQTRY +L F++DE E+ S++EL Y GKL K P YEV++
Sbjct: 320 VINVDPPLRQGQTRYPYLIFQFSRDEEMMAEIKLSDEELA-AYNGKLQKSYEAPAYEVVS 378
Query: 317 KIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIA 376
I+ + N+K+ PG F+ H G + V C+ KA GYIY LER +F+ K PI + + + +
Sbjct: 379 NIIHGLANKKVIRPGGFQSHEGHNGVKCNVKADEGYIYFLERSMLFVSKKPIFMPYADTS 438
Query: 377 TVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGE 433
V F R GG S+R+FD + + G H FSS+ KEE + +++K +RVKN E
Sbjct: 439 LVRFERVGGAMLSSRTFDLRVATRGGPDHVFSSVSKEELQVIDSHLKDKGVRVKNE-IAE 497
Query: 434 KPNYKEDFGSSDDEKEPDAYLAR-----VKREAAERDDEDDEDEDESTDEDFNP-DQAES 487
+ + S+D+ + D +A VKR A D ES DEDF ++
Sbjct: 498 ETSATVAAMLSEDDDDDDDMIASEDGDGVKRAAGSGD-------SESEDEDFQAGSNSDD 550
Query: 488 DVAEEYDSNPTPTDSD 503
D+ EEYD N T DSD
Sbjct: 551 DLPEEYDENYTSPDSD 566
>gi|444316642|ref|XP_004178978.1| hypothetical protein TBLA_0B06350 [Tetrapisispora blattae CBS 6284]
gi|387512018|emb|CCH59459.1| hypothetical protein TBLA_0B06350 [Tetrapisispora blattae CBS 6284]
Length = 545
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 261/507 (51%), Gaps = 50/507 (9%)
Query: 47 DLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRG 106
+L V W + + L+I KN + + GF + + D + F F + + KE S+RG
Sbjct: 51 ELSTVQWSRGCRGYELKINTKNQGVVQLDGFSQDDFDLLKGDFHRRFDVQLEHKEHSLRG 110
Query: 107 WNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE----AAESLI 161
WNWG T N + F N FEIP + ++ T K EV +EF +E A + L+
Sbjct: 111 WNWGKTDLARNEMVFAYNGKPTFEIPYKRINNTNLTTKTEVAIEFDIQNEEYQPAGDELV 170
Query: 162 EMRFYIPT-----------------NEIAGDTDP----------VEAFKDSVMNQASVIN 194
EMRFY+P ++ GD + E F + + +A +
Sbjct: 171 EMRFYVPGVMEDEEDSQESKPKVEGEDVDGDVEMEKPAVKEKSIAENFYEELKEKAEIGE 230
Query: 195 ATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQN 254
G +I F ++ TPRGRYDI ++ + +L GKT++YK+ + R+ +LP D +
Sbjct: 231 IAGASIVSFQDVFFATPRGRYDIDVYKNSIRLRGKTYEYKLQHRQIQRIISLPKADDIHH 290
Query: 255 FFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEV 314
++S++PP++QGQT Y FL L F +DE +E+EL ++E +E Y+ L K T+ V
Sbjct: 291 LVILSIEPPLRQGQTPYPFLVLQFQKDEETEVELNLEDKEFEENYKDILKKSYDSKTHIV 350
Query: 315 MAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEE 374
++ ++K + RK+ VPG + AV+CSYKA GY+YPL+ F+F+ KP ++I F +
Sbjct: 351 ISHVLKGLTGRKVIVPGEYISKYDQCAVSCSYKANEGYLYPLDNAFLFLTKPTLYIPFSD 410
Query: 375 IATVNFARSG---GSTRSFDFEIELKSGV-LHTFSSIEKEEYGKLFDFIREKKLRVKNTG 430
I+ VN +R+G S+R+FD E+ L++ TF +I KEE L F++ K LRVKN
Sbjct: 411 ISAVNISRAGTSSTSSRTFDLEVVLRANRGSTTFGNISKEEQQLLETFLKSKNLRVKNEE 470
Query: 431 KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVA 490
K + + GS D + D A ++DES D++F ++ DVA
Sbjct: 471 KEAQTRLQTALGSDSDNDDIDMGSAG--------------EDDESADDEFKASSSDEDVA 516
Query: 491 EEYDSNPTPTDSDEDSDASEGTKKKKK 517
EE+DS + +E+ E KK K
Sbjct: 517 EEFDSQAEMSSDEEEGSGDERPSKKAK 543
>gi|392566242|gb|EIW59418.1| SSrecog-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 644
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 243/437 (55%), Gaps = 32/437 (7%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK +I + +K ++ + I D+ + W ++ + LR+ LK+ + F GF
Sbjct: 18 GKFRIAVSGMAWKAEEGSDMVAIQSVDIKWAQWIRVARNYQLRVGLKDRTRETFDGFVRE 77
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ DK+ K +F I + KE+S +GWNWG T F G L+F V+N TAFE+PL +V+
Sbjct: 78 DHDKLSHLLKQHFSITLETKEVSFKGWNWGVTDFQGQDLAFLVSNRTAFELPLPNVANSN 137
Query: 140 TTGKNEVTVEFH-----PNDEAAESLIEMRFYIPTNEIAG------------------DT 176
G+ EV++EF P+ A + ++E+RFY+P ++ G +
Sbjct: 138 IAGRTEVSLEFATQSKKPSRSAPDEMVEIRFYVPGTQVKGQRGSDAGSQKSDVEEDGEEI 197
Query: 177 DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIP 236
+AF D V +A + GD I F+E+ LTPRGRYD+ ++ F +L G+T+DYKI
Sbjct: 198 SAAQAFHDMVKEKAELGQVAGDIILSFDEVNVLTPRGRYDVDMYPEFLRLRGRTYDYKIM 257
Query: 237 ISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
++ ++F LP KD + F++ L PI+QGQTRY +L + FN++E EL SE+E+
Sbjct: 258 YGSISKLFLLP-KDDQHVLFILGLSVPIRQGQTRYQYLVMQFNREEEITAELNMSEEEIA 316
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPL 356
+ YE KL K PT+EV++ + + + +KI G+F+ G +V + KA G ++ L
Sbjct: 317 Q-YE-KLKKNYEDPTFEVVSGVFRALSKKKIIGAGNFQSRDGHPSVKANLKAVQGDLFML 374
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTFSSIEKEE 411
E+ F+ K P I +I V F+R G + R+FD +I K G +TF+S+ KEE
Sbjct: 375 EKYIFFVSKQPTLIELSDIHLVVFSRLGAGLGATAARTFDVKIVTKRGPEYTFTSLNKEE 434
Query: 412 YGKLFDFIREKKLRVKN 428
Y + ++++KK++ KN
Sbjct: 435 YDHVNAYLQDKKVKTKN 451
>gi|393243097|gb|EJD50613.1| FACT complex subunit POB3 [Auricularia delicata TFB-10046 SS5]
Length = 517
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 265/494 (53%), Gaps = 50/494 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-NGSLHRFAGFKE 79
GK++ + +K + I ++ + W ++ + LR+ LK N F GF+
Sbjct: 18 GKIRFAQSGLAWKALQGEHTATIAAGNIKWAQWLRVARNFQLRVGLKDNRRRETFDGFQR 77
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ DK+ FKT + + + K++S +GWNWG T F G L+F V+N TAFE+P++ V+
Sbjct: 78 EDHDKLVGIFKTYYDVVLESKDISYKGWNWGATDFQGEDLAFLVSNKTAFEVPMKYVANS 137
Query: 140 -TTGKNEVTVEFHPNDEAA---------ESLIEMRFYIP------------------TNE 171
GK EV+VEF P D A + L+EMRFY+P +++
Sbjct: 138 NIAGKTEVSVEFAPVDATAAEKKSARRYDELVEMRFYVPGVVERAADDDDDKDKEKKSDD 197
Query: 172 IAGDTDPVEAFKDSVMNQASVINAT-GDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
+ + F D++ ++A + G++I +F ++ +TPRGRYDI +F F +L GKT
Sbjct: 198 DDEEQSAAQVFHDAIRDRAEIGQGIMGESIVLFEDVLVITPRGRYDIDMFTDFMRLRGKT 257
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
+DYKI S + R+F LP D F+I LDPPI+QGQT+Y +L +F++D+ E++L
Sbjct: 258 YDYKIMYSAINRLFLLPKADEIHVQFIIGLDPPIRQGQTKYPYLVTMFSRDQELEIDLAL 317
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
E+ +K KYE +LDK Y+V++ + + + N+KIT SF+ G ++ C+ KA+
Sbjct: 318 DEETIKSKYEDRLDKHYETAMYQVVSSVFRGLTNKKITGTSSFQSVGGHPSIKCNLKASQ 377
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSI 407
G ++ LE+ F+ K P I F +I V F+R GG S R+ D ++ ++G F+S+
Sbjct: 378 GELFVLEKALFFVTKQPTLIDFADIHQVVFSRLGGGMASARTIDVKVVKQTGPELVFTSM 437
Query: 408 EKEEYGKLFDFIREKKLRVKN----------TGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
KEE+ L F++ KK++ KN G G+ + + +SDDE A
Sbjct: 438 NKEEHEGLEAFLKGKKVKTKNEMGDDLIAAALGDGDDEDEEMQSVASDDE-------APA 490
Query: 458 KREAAERDDEDDED 471
+ A DDED E+
Sbjct: 491 RPRMANDDDEDSEE 504
>gi|302690071|ref|XP_003034715.1| hypothetical protein SCHCODRAFT_81855 [Schizophyllum commune H4-8]
gi|300108410|gb|EFI99812.1| hypothetical protein SCHCODRAFT_81855 [Schizophyllum commune H4-8]
Length = 651
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 239/432 (55%), Gaps = 26/432 (6%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GKL++ + +K + + + D+ + W ++ + LR+ +K+ H F GF
Sbjct: 18 GKLRVASSGMAWKGSEGEPIVALPADDIKWAQWLRVARNYQLRVGVKDHQKHHFDGFARE 77
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ DK+ + + F + + KE++ +GWNWG T F G L+F V++ AFE+PL++V+
Sbjct: 78 DHDKLATLLRNYFSVAIETKEITFKGWNWGDTDFQGQDLAFLVSDRVAFELPLQNVANSN 137
Query: 140 TTGKNEVTVEFHPNDEA------AESLIEMRFYIPTNEI---------AGDTD------P 178
G+ EV++EF + + ++E+RF++P + AG +D
Sbjct: 138 IAGRTEVSLEFSGLTTSKSVRPQGDEMVEIRFHVPGVQTKLKGESASDAGQSDDEEEISA 197
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
+ F D + ++A + +GD I F E+ LTPRGRYD+ +F F +L GKT+DYKI +
Sbjct: 198 AQVFHDLIKDKAEIGQVSGDMILSFEEVLILTPRGRYDLDMFPDFLRLRGKTYDYKIVYT 257
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
++ R+F L KD F++ L+ PI+QGQTRY +L + F +E EL ++++L K
Sbjct: 258 SISRLFLLA-KDDNHVLFILGLNTPIRQGQTRYSYLVMQFTHEEEITAELNMTDEQLA-K 315
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLER 358
Y G L+K PTYEV++ I K + +KI G F+ + + KA G ++ L++
Sbjct: 316 YNGTLEKSYEKPTYEVVSAIFKGLTGKKIIGVGGFKSTADHPGIKANLKAVQGDLFILDK 375
Query: 359 GFIFIHKPPIHIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLF 416
F+ K P+ I F +I F+R GG T R+FD +E +SG HTFSSI KEEY +
Sbjct: 376 QLFFVSKQPLLIDFSDIHAAIFSRVGGGTGSRTFDLRVETRSGPEHTFSSIAKEEYEGVE 435
Query: 417 DFIREKKLRVKN 428
F++ KL+VK+
Sbjct: 436 KFLKASKLKVKS 447
>gi|149247649|ref|XP_001528233.1| hypothetical protein LELG_00753 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448187|gb|EDK42575.1| hypothetical protein LELG_00753 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 574
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 236/432 (54%), Gaps = 50/432 (11%)
Query: 47 DLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRG 106
++ W + + + LR+ KN + GF + +++ NF I + +E S+RG
Sbjct: 55 EIILATWSRGLKGYELRVQTKNKGVIVLDGFHVDDFNQLKQELTRNFHISLEHEEHSLRG 114
Query: 107 WNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHPND-----EAAESL 160
WNWG T N L F+VNN AFEIP ++S TGKNEV +EF+ +D + + +
Sbjct: 115 WNWGKTDLAKNELVFNVNNKPAFEIPYDNISNSNLTGKNEVAIEFNLSDGKTIDKLGDEI 174
Query: 161 IEMRFYIPTNEIAGDTD----------------------------------------PVE 180
+EMRFY+P + +T+ +
Sbjct: 175 VEMRFYVPGTTVELETNTTKKTIKNEDGKEEEKEDEEEKRKSEENMADNNAESMEQNAAQ 234
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
F + + ++A + G+AI F++ LTPRGRYDI ++++ +L GKT+DYKI +
Sbjct: 235 VFYEQLKDKADIGQIAGEAIVSFSDALFLTPRGRYDIDMYSTSLRLRGKTYDYKIQYEQI 294
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
R+F+LP D + +I +DPP++QGQTRY FL L F +DE +E+EL S++E KY+
Sbjct: 295 ERIFSLPKPDEVHHLIIIQIDPPLRQGQTRYPFLVLQFARDEETELELNLSDEEFDAKYK 354
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
+L K PTY VMA ++ + +K+ PGSF+ ++CS KA+ GY+YPL+R F
Sbjct: 355 NRLKKTYDAPTYIVMAHCLRGLTEKKLFTPGSFQSRFLQPGLSCSLKASEGYLYPLDRCF 414
Query: 361 IFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEKEEYGKLF 416
+F+ KP ++I + EI+ V +R+GG ++R+FD EI + H F SI++EE +
Sbjct: 415 LFVTKPTLYIPYSEISNVVMSRTGGGVSASRTFDLEINIVGSTQKHVFGSIDREEQDNIE 474
Query: 417 DFIREKKLRVKN 428
F +EK ++VKN
Sbjct: 475 RFCKEKGVKVKN 486
>gi|443897087|dbj|GAC74429.1| nucleosome-binding factor SPN, POB3 subunit [Pseudozyma antarctica
T-34]
Length = 556
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 242/461 (52%), Gaps = 51/461 (11%)
Query: 19 CPGKLKITDQNIVFK-NKKTGKVEQINGPDLDFVNWQKLVGTWALRIFL-------KNGS 70
PGKL+++ + +K + G I + W ++ + L IFL +
Sbjct: 17 TPGKLRMSQGGLGWKPSVGEGTTITIPADHMASFQWIRVARNYQLSIFLVKDRDAPSSAQ 76
Query: 71 LH----RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNT 126
H F GF + +++ S + F ++ KE+S RGWNWG K + + F V +
Sbjct: 77 THPRRTNFDGFVRDDFERLSSSIRQYFSKNLDSKEVSTRGWNWGQAKITNHDVQFLVRDK 136
Query: 127 TAFEIPLRDVSQCTTGKNEVTVEF-HPNDEA-------------------AESLIEMRFY 166
AFE+PL ++ K EV++EF +P + + L+EMR Y
Sbjct: 137 LAFELPLAHLANSNIAKTEVSMEFLNPEQQQPGANTGSTDGSSSKSRRIKGDQLVEMRLY 196
Query: 167 IPTNEI------------AGDTD----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLT 210
+P GD + EAF +++ ++A + GD+I VF E+ LT
Sbjct: 197 VPGQAAKDDGSDAASAADGGDDNNEETAAEAFHEALKSKADIGQVAGDSIVVFKEVLVLT 256
Query: 211 PRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTR 270
PRGRYDI +F++F +L GKT+DYKI S++ ++F LP D VI LDPPI+QGQTR
Sbjct: 257 PRGRYDIDVFSTFIRLRGKTYDYKILYSSMNKLFLLPKSDEIHVMLVIGLDPPIRQGQTR 316
Query: 271 YHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVP 330
Y +L L F ++E + EL ++ + KY+GKL K PT+ ++ + KV+ +K+ P
Sbjct: 317 YPYLVLQFPREEEMDAELNLDDETIATKYDGKLKKRYEEPTFRIVTNMFKVLSGQKVATP 376
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---ST 387
F +G +++ C+ KAA G +YPLE+ +++ K P+++ + EI +R GG S+
Sbjct: 377 TDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVASS 436
Query: 388 RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
++FD + K G HTF SI +EE +L ++ E+K+R+KN
Sbjct: 437 KTFDLRVATKGGTDHTFQSISREELDRLKAWLAERKVRIKN 477
>gi|119482904|ref|XP_001261480.1| structure-specific recognition protein, putative [Neosartorya
fischeri NRRL 181]
gi|119409635|gb|EAW19583.1| structure-specific recognition protein, putative [Neosartorya
fischeri NRRL 181]
Length = 574
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 283/562 (50%), Gaps = 54/562 (9%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF +
Sbjct: 18 PGKCKLAESGLGWRPSGGGDTFTLDSNNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQ 77
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 78 EDFERLSKAFKIWYGINVENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNT 137
Query: 140 T-TGKNEVTVEFHPNDEA--------------------AESLIEMRFYIPTNEIAGD--- 175
GKNEV VEF + + L+EMRFYIP + +
Sbjct: 138 NLAGKNEVAVEFALTSDGDANVQPSGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTEKGI 197
Query: 176 -----------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
+ F +++M +A + + GD A F ++ LTPRGR+DI
Sbjct: 198 KTENDEENGEEEEEGEEQNAANLFYETLMEKAEIGDVAGDTFATFLDVLHLTPRGRFDID 257
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 258 MYESSFRLRGKTYDYKIQYASIKKFFLLPKNDEMHTLIVLGLDPPLRQGQTRYPFLVMQL 317
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHT 337
DE +EL +E+ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 318 KLDEEISLELNMTEELLESRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVSHH 377
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEI 394
G S V CS KA G +Y L++ IF+ KP +++ E IA + +R GG ++R+FD +
Sbjct: 378 GHSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENIAVITMSRVGGAVSASRTFDITV 437
Query: 395 ELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
LK+G+ H FS+I +EE L +F + K +R KN + +DD D
Sbjct: 438 TLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDTSALIAAALDNDDMMSSDED 497
Query: 454 LARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTK 513
R R +A+ D+E +++ ++ ++ESDVAEE+DS + S D++ + +
Sbjct: 498 GGRADRGSADEDEESVDEDFQA--------ESESDVAEEFDSEHESSGSASDAEMDDASD 549
Query: 514 KKKKEKSRKTITISEKPRKSKK 535
E+ E+P+K K
Sbjct: 550 AGDDEEDVDMSEEEERPKKKSK 571
>gi|391868349|gb|EIT77567.1| nucleosome-binding factor SPN, POB3 subunit [Aspergillus oryzae
3.042]
Length = 574
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 277/542 (51%), Gaps = 68/542 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 15 PGKCKLAESGLGWKPSGGGETFTLDSSNVGAAQWSRAAKGFELKILSRSSGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 75 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELSFNVQNRPAFEVPYSEISNT 134
Query: 140 T-TGKNEVTVEFHPNDEAAES---------------------LIEMRFYIPTNEIAGD-- 175
GKNEV VE N + A++ L+EMRFYIP + +
Sbjct: 135 NLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASGPDELVEMRFYIPGTVMKTEKG 194
Query: 176 -------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
+ F + +M +A + + GD A F ++ LTPRGR+D
Sbjct: 195 IKEENGEEENGEEEEEGEEQNAANLFYEMLMEKAEIGDVAGDTFATFLDVLHLTPRGRFD 254
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
I ++ S F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 255 IDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVM 314
Query: 277 LFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRG 335
DE +EL +++ ++ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 315 QLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVS 374
Query: 336 HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDF 392
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 375 HHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVENIAIITMSRVGGAVSASRTFDI 434
Query: 393 EIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN------TGKGEKPNYKEDFGSSD 445
+ LK+G+ H FS+I +EE L +F + K +R KN + GSSD
Sbjct: 435 TVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDAGALLAAALDNDVMGSSD 494
Query: 446 DEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED 505
DE R R +A+ D+E +++ ++ ++ESDVAEEYDS + S D
Sbjct: 495 DEG------VRADRGSADEDEESIDEDFQA--------ESESDVAEEYDSAHESSGSGSD 540
Query: 506 SD 507
++
Sbjct: 541 AE 542
>gi|238482569|ref|XP_002372523.1| structure-specific recognition protein, putative [Aspergillus
flavus NRRL3357]
gi|220700573|gb|EED56911.1| structure-specific recognition protein, putative [Aspergillus
flavus NRRL3357]
Length = 634
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 277/542 (51%), Gaps = 68/542 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 75 PGKCKLAESGLGWKPSGGGETFTLDSSNVGAAQWSRAAKGFELKILSRSSGVIQLDGFDQ 134
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 135 EDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELSFNVQNRPAFEVPYSEISNT 194
Query: 140 -TTGKNEVTVEFHPNDEAAES---------------------LIEMRFYIPTNEIAGD-- 175
GKNEV VE N + A++ L+EMRFYIP + +
Sbjct: 195 NLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASGPDELVEMRFYIPGTVMKTEKG 254
Query: 176 -------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
+ F + +M +A + + GD A F ++ LTPRGR+D
Sbjct: 255 IKEENGEEENGEEEEEGEEQNAANLFYEMLMEKAEIGDVAGDTFATFLDVLHLTPRGRFD 314
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
I ++ S F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 315 IDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVM 374
Query: 277 LFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRG 335
DE +EL +++ ++ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 375 QLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVS 434
Query: 336 HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDF 392
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 435 HHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVENIAIITMSRVGGAVSASRTFDI 494
Query: 393 EIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN------TGKGEKPNYKEDFGSSD 445
+ LK+G+ H FS+I +EE L +F + K +R KN + GSSD
Sbjct: 495 TVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDAGALLAAALDNDVMGSSD 554
Query: 446 DEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED 505
DE R R +A+ D+E +++ ++ ++ESDVAEEYDS + S D
Sbjct: 555 DEG------VRADRGSADEDEESIDEDFQA--------ESESDVAEEYDSAHESSGSGSD 600
Query: 506 SD 507
++
Sbjct: 601 AE 602
>gi|358369525|dbj|GAA86139.1| structure-specific recognition protein [Aspergillus kawachii IFO
4308]
Length = 594
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 279/548 (50%), Gaps = 70/548 (12%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 34 GKCKLAESGLGWKPSGGGETFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQE 93
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + I++ +E ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 94 DFERLSKAFKIWYGINMESREHALRGWNWGKAEFTKAELSFNVQNRPAFEIPYSEISNTN 153
Query: 141 -TGKNEVTVEFHPNDEAAE--------------------SLIEMRFYIPTNEIAGDTDPV 179
GKNEV VEF E E L+EMRFYIP + +
Sbjct: 154 LAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGPDELVEMRFYIPGTAVKTEKGIK 213
Query: 180 E------------------------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
E F + +M++A + + GD A F ++ LTPRGR+
Sbjct: 214 EENAENPDEENGAEEEEGEEQNAANLFYEMLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 273
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
DI ++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL
Sbjct: 274 DIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLV 333
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFR 334
+ DE +EL +++ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 334 MQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFV 393
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 394 SHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQIENIAIITMSRVGGAISASRTFD 453
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSS 444
+ LK+G+ H FS+I +EE L +F + K +R KN + +D GSS
Sbjct: 454 ITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDASALIAAALDNDDMGSS 513
Query: 445 DDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDE 504
DDE R R +A+ D+E +++ ++ +++SDVAEEYDS + S
Sbjct: 514 DDEG------VRADRGSADEDEESIDEDFQA--------ESDSDVAEEYDSAHESSGSAS 559
Query: 505 DSDASEGT 512
D++ + +
Sbjct: 560 DAEMGDAS 567
>gi|317029335|ref|XP_001391369.2| FACT complex subunit pob3 [Aspergillus niger CBS 513.88]
Length = 576
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 275/548 (50%), Gaps = 70/548 (12%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 16 GKCKLAESGLGWKPSGGGETFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQE 75
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + I++ +E ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 76 DFERLSKAFKIWYGINMESREHALRGWNWGKAEFTKAELSFNVQNRPAFEIPYSEISNTN 135
Query: 140 TTGKNEVTVEFHPNDEAAE--------------------SLIEMRFYIPTNEIAGD---- 175
GKNEV VEF E E L+EMRFYIP + +
Sbjct: 136 LAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGPDELVEMRFYIPGTAVKTEKGIK 195
Query: 176 --------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
+ F + +M++A + + GD A F ++ LTPRGR+
Sbjct: 196 EENAENADEENGAEEEEGEEQNAANLFYEMLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 255
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
DI ++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL
Sbjct: 256 DIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLV 315
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFR 334
+ DE +EL +++ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 316 MQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFV 375
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 376 SHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQIENIAIITMSRVGGAISASRTFD 435
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSS 444
+ LK+G+ H FS+I +EE L +F + K +R KN + +D GSS
Sbjct: 436 ITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDASALIAAALDNDDMGSS 495
Query: 445 DDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDE 504
DDE R D DEDE + ++ +++SDVAEEYDS + S
Sbjct: 496 DDE--------------GVRADRGSADEDEESIDEDFEAESDSDVAEEYDSAHESSGSAS 541
Query: 505 DSDASEGT 512
D++ + +
Sbjct: 542 DAEMGDAS 549
>gi|350635490|gb|EHA23851.1| hypothetical protein ASPNIDRAFT_40088 [Aspergillus niger ATCC 1015]
Length = 724
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 70/548 (12%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G+ ++ ++ W + + L+I ++ + + GF +
Sbjct: 164 GKCKLAESGLGWKPSGGGETFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFDQE 223
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + I++ +E ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 224 DFERLSKAFKIWYGINMESREHALRGWNWGKAEFTKAELSFNVQNRPAFEIPYSEISNTN 283
Query: 140 TTGKNEVTVEFHPNDEAAES--------------------LIEMRFYIPTNEIAGDTDPV 179
GKNEV VEF E E L+EMRFYIP + +
Sbjct: 284 LAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGPDELVEMRFYIPGTAVKTEKGIK 343
Query: 180 E------------------------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
E F + +M++A + + GD A F ++ LTPRGR+
Sbjct: 344 EENAETADEENGAEEEEGEEQNAANLFYEMLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 403
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
DI ++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL
Sbjct: 404 DIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLV 463
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FR 334
+ DE +EL +++ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F
Sbjct: 464 MQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFV 523
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G +Y L++ IF+ KP +I+ E IA + +R GG ++R+FD
Sbjct: 524 SHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQIENIAIITMSRVGGAISASRTFD 583
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSS 444
+ LK+G+ H FS+I +EE L +F + K +R KN + +D GSS
Sbjct: 584 ITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDASALIAAALDNDDMGSS 643
Query: 445 DDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDE 504
DDE R D DEDE + ++ +++SDVAEEYDS + S
Sbjct: 644 DDE--------------GVRADRGSADEDEESIDEDFEAESDSDVAEEYDSAHESSGSAS 689
Query: 505 DSDASEGT 512
D++ + +
Sbjct: 690 DAEMGDAS 697
>gi|336370130|gb|EGN98471.1| hypothetical protein SERLA73DRAFT_109982 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382900|gb|EGO24050.1| hypothetical protein SERLADRAFT_450341 [Serpula lacrymans var.
lacrymans S7.9]
Length = 643
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 244/438 (55%), Gaps = 33/438 (7%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK ++ + +K +++ V + D+ + W ++ + LRI +K+ F GF
Sbjct: 17 GKFRVAASGMAWKGEESEGVIALPSGDIKWAQWLRVARNFQLRIDMKDRRRETFDGFARE 76
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ DK+ K +F + + +++S +GWNWG T F G L+F V+N T+FE+PLR V+
Sbjct: 77 DHDKLAGLMKQHFGVTLEVRDVSFKGWNWGVTDFQGQDLAFLVSNKTSFELPLRQVANSN 136
Query: 140 TTGKNEVTVEFHPND-------EAAESLIEMRFYIPTNEI------AG-----------D 175
G+ EV++EF P+ A + ++E+RFY+P AG +
Sbjct: 137 IAGRTEVSLEFAPSSSGKKPSRSAPDEMVEIRFYVPGTHARQRGSDAGSEKSDVEEEDEE 196
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
T +AF D++ ++A + TGD + F E+ LTPRGRYD+ +F F +L GKT+DYKI
Sbjct: 197 TSAAQAFHDAIKDKADIGQVTGDLVLSFEEVLVLTPRGRYDVDMFLDFLRLRGKTYDYKI 256
Query: 236 PISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
S++ R+F LP KD + F++ L PI+QGQTRY +L + F ++E + EL SE+++
Sbjct: 257 LYSSISRLFLLP-KDDQHVLFILGLSTPIRQGQTRYQYLVMQFAREEETTAELNMSEEDI 315
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
KY+ +L K PT+EV++ + + + +KI GSF G + + KA G ++
Sbjct: 316 T-KYD-RLKKNYEDPTFEVVSGVFRALSKKKIIGSGSFSSRDGHPGIKANLKAVQGDLFM 373
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLHTFSSIEKE 410
LE+ F+ K P + +I F+R G S R+FD +I KSG +TF+SI KE
Sbjct: 374 LEKYIFFVSKQPTLVELSDIHQCVFSRVGASMGATAARTFDLKIVTKSGPEYTFTSINKE 433
Query: 411 EYGKLFDFIREKKLRVKN 428
E+ ++++KK+++KN
Sbjct: 434 EHEPTESYLKDKKIKIKN 451
>gi|115400027|ref|XP_001215602.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191268|gb|EAU32968.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 610
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 287/569 (50%), Gaps = 81/569 (14%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+ K+ + + +K G ++ ++ W + + L+I + + + GF +
Sbjct: 56 GRCKLAESGLGWKPSGGGDTFTLDSSNVAAAQWSRAAKGYELKILSRTSGVIQLDGFDQE 115
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + I++ KE ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 116 DFERLSKAFKIWYGINLENKEHALRGWNWGKAEFTKAELSFNVQNRPAFEIPYSEISNTN 175
Query: 141 -TGKNEVTVEFH------PNDEAAES--------------LIEMRFYIPTNEIAGD---- 175
GKNEV VEF+ N + A S L+EMRFYIP + +
Sbjct: 176 LAGKNEVAVEFNLAADGTSNAQPAGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTEKGVK 235
Query: 176 ----------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 236 EEDGEEQENGEEEGEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 295
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI +++ + F LP D V+ L+PP++QGQTRY FL +
Sbjct: 296 YESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIVLGLEPPLRQGQTRYPFLVMQLK 355
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
DE +EL +++ L+ +Y+ KL+ P ++V+ KI + + +K+ +P F H G
Sbjct: 356 LDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVSHHG 415
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIE 395
S V CS KA G +Y L++ IF+ KP +I+ E + V +R GG+ +R+FD +
Sbjct: 416 HSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQLENVGVVTMSRVGGAVSASRTFDITVS 475
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEK 448
LK G+ H FS+I +EE L DF + K +R+KN + ED SSD++
Sbjct: 476 LKGGMGEHQFSNINREEQQPLEDFFKAKNIRIKNEMSDDTSALIAAALDNEDMASSDEDG 535
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDS------ 502
R R +A+ ++ES DEDF+ +++SDVAEEYDS + S
Sbjct: 536 ------GRADRGSADE-------DEESVDEDFHA-ESDSDVAEEYDSAHESSGSGSDAEM 581
Query: 503 ---------DEDSDASEGTKKKKKEKSRK 522
DED D SE + KKK K K
Sbjct: 582 DDASDAGEEDEDVDMSEEERPKKKSKVGK 610
>gi|328871503|gb|EGG19873.1| structure-specific recognition protein 1 [Dictyostelium
fasciculatum]
Length = 510
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 263/446 (58%), Gaps = 24/446 (5%)
Query: 2 TEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLV-GTW 60
T A F +S R G LK+ + + +K++ G+ E I +++ W ++ +
Sbjct: 9 TGAFSFNNISLGGRIGGTRGVLKMNNVGLAWKSE-AGRSETIQSSEIEAAGWTRMTPKIY 67
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + +K G+ +F GF+E + + + FFK N+ I++ ELS RG N+ K G+++S
Sbjct: 68 QLNLKMKGGASVKFDGFREPDNETLKQFFKENYDIELDNIELSTRGVNFSMVKVNGSIVS 127
Query: 121 FD-VNNTTAFEIPLRDVSQCT---TGKNEVTVEFHPN---DEAAESLIEMRFYIPTNEIA 173
F N T FE P+ ++SQ + KNE+T+EFH + DE ESL+E+R Y P ++
Sbjct: 128 FTGSNQKTLFEFPISEISQSIINLSNKNELTMEFHHDSTLDEEDESLVEVRLYNPFSKSL 187
Query: 174 -----GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
DPV+ F+D+++ ++ I+ G IAV IQ +TPRGR D++++ +F +LHG
Sbjct: 188 KEDEDNTEDPVKDFQDALLRKSD-ISQVGKRIAVLENIQLVTPRGRCDVEMYPTFLRLHG 246
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT DYK+ +T+ ++F LP +D +FVISLDPP++QG+T+Y L + +++ + +EL
Sbjct: 247 KTHDYKVIYNTISKLFQLPKQDQANMYFVISLDPPVRQGKTKYDHLVIQLPKNQEASVEL 306
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
++ E +EKY+ KL + G Y ++ +I+ + + I VPG+F+ +++ CS KA
Sbjct: 307 NLTD-EAQEKYKDKLSPTMDGTFYVIVRRILTSLTGKNIIVPGNFQSANQFNSIKCSLKA 365
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARS--------GGSTRSFDFEIELKSGV 400
G +YPLER F FI+KPP +I+F +I + F+R+ S+R+FD I LK+
Sbjct: 366 NEGDLYPLERSFFFIYKPPTYIKFTDIDFIEFSRAPTSVTGRNAPSSRNFDLGITLKNQT 425
Query: 401 LHTFSSIEKEEYGKLFDFIREKKLRV 426
F++I KEEY L +FI+ K ++V
Sbjct: 426 NIQFTNILKEEYENLHNFIQSKGIKV 451
>gi|409078873|gb|EKM79235.1| hypothetical protein AGABI1DRAFT_58681 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 684
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 249/440 (56%), Gaps = 31/440 (7%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
+L P GK ++ + +K + V + D+ + W ++ + LR+ +++ +F
Sbjct: 12 SLAPDVGKFRVAPSGMAWKGSDSEAVVAMASTDIKWAQWLRVARNFQLRVGMRDHRKEKF 71
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF + DK+ S K +F I + +E+S +GWNWG T F G+ L+F V + AFE+PLR
Sbjct: 72 DGFMREDHDKLASLLKNHFGITLETREVSFKGWNWGVTDFQGSDLAFMVQDKVAFELPLR 131
Query: 135 DVSQC-TTGKNEVTVEFHPNDEAAESL----IEMRFYIP-------TNEIAG-------- 174
V+ G+ EV++EF P + +++L +E+RF++P T AG
Sbjct: 132 HVANSNIAGRTEVSLEFTPLGKGSKALGDEMMEIRFHVPGTQKSKATGSDAGSQKSDDEE 191
Query: 175 -DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
D + F D++ +A + +GD I F EI LTPRGRYD+ + + + +L GKT+DY
Sbjct: 192 DDISAAQVFHDTIKEKAELGQVSGDLILSFEEILVLTPRGRYDMDMSHEYLRLRGKTYDY 251
Query: 234 KIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
KI +++ ++F LP KD ++ F++ L PI+QGQTRY +L + F+++E EL +E+
Sbjct: 252 KIMYNSISKLFLLP-KDDQRVLFILGLSIPIRQGQTRYQYLVMQFSREEEITAELNMTEE 310
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYI 353
E+ KY+ +L K PT+EV++ + + + +KI GSF+ G + + KA G +
Sbjct: 311 EVA-KYD-RLKKNYEDPTFEVVSSVFRALAKKKIVGAGSFQSRDGHPGIKANLKAIQGDL 368
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLHTFSSIE 408
+ LE+ F+ K P+ + +I V F+R G S R+FD +I KSG HTF+SI
Sbjct: 369 FLLEKYIFFVSKSPLLVEIADIHQVVFSRVGASMGAAAARTFDLKIVTKSGAEHTFTSIN 428
Query: 409 KEEYGKLFDFIREKKLRVKN 428
KEE+ + ++++KK+++K
Sbjct: 429 KEEHESVDAYLKDKKIKIKT 448
>gi|395330846|gb|EJF63228.1| SSrecog-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 628
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 249/451 (55%), Gaps = 36/451 (7%)
Query: 11 SSEFRG---ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIF 65
+++F G L P GK +I + +K ++ ++ + D+ + W ++ + LR+
Sbjct: 3 TTQFDGIYHGLSPEVGKFRIAVSGMAWKAEEGDQMVAMQASDIKWAQWIRVARNYQLRVG 62
Query: 66 LKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNN 125
LK+ S F GF + D++ K +F I + KE+S +GWNWG T F G L+F V+N
Sbjct: 63 LKDRSKETFDGFVREDHDRLAHLLKQHFSITLETKEVSFKGWNWGVTDFQGQELAFLVSN 122
Query: 126 TTAFEIPLRDVSQC-TTGKNEVTVEFH-----PNDEAAESLIEMRFYIP----------- 168
TAFE+PL V+ G+ EV++EF P+ A + ++E+RFY+P
Sbjct: 123 KTAFELPLTQVANSNIAGRTEVSLEFATQNRKPSRNAPDEMVEIRFYVPGTQTKSRGSDS 182
Query: 169 ------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
E + +AF D V +A + +GD I F+E+ LTPRGRYD+ ++
Sbjct: 183 GSQKSDVEEDGEEISAAQAFHDLVKEKAELGQVSGDIILSFDEVNVLTPRGRYDVDMYPD 242
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F +L G+T+DYKI S++ ++F LP KD F++ L PI+QGQTRY +L + FN++E
Sbjct: 243 FLRLRGRTYDYKIIYSSISKLFLLP-KDDLHVLFILGLSIPIRQGQTRYQYLVMQFNREE 301
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAV 342
EL +E+E+ KY+ +L K PTYEV++ + + + +KI G+F+ G +V
Sbjct: 302 EITAELNMAEEEIA-KYD-RLKKNYEDPTYEVVSGVFRALSKKKIIGAGNFQSRDGHPSV 359
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELK 397
+ KA G ++ LE+ F+ K P I +I V F+R G S R+FD +I K
Sbjct: 360 KANLKAVQGDLFLLEKYVFFVSKQPTLIELSDIHQVVFSRLGTSMGANAARTFDMKIVTK 419
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
SG TF+S+ KEE+ + ++++KK++ KN
Sbjct: 420 SGSDLTFTSVNKEEHEVVSAYLQDKKVKTKN 450
>gi|336271647|ref|XP_003350582.1| hypothetical protein SMAC_02295 [Sordaria macrospora k-hell]
gi|380090247|emb|CCC12074.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 565
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 272/519 (52%), Gaps = 56/519 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ W + + ++I L++ + + GF +
Sbjct: 19 GKSRFAENGLGWKPAGGGDAFTLDSSNIGGAQWSRAARGYEVKILLRSSGVVQLDGFHQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + I++ KE S+RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 79 DYERLSKIFKHWYSINLENKEHSLRGWNWGKAEFSKAELTFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFHPND------------------EAAESLIEMRFYIPT---------NEI 172
G+NE+ VEF ND + L+E+RFYIP E
Sbjct: 139 LAGRNEIAVEF-ANDGGKSNGHNGTGGKGKKATAGKDQLVEVRFYIPGTTTRKEAEGGEA 197
Query: 173 AGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
D D V F D+++ +A + GD IA F ++ LTPRGR+DI ++++ F+L
Sbjct: 198 GSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYDASFRLR 257
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F DE ++
Sbjct: 258 GKTYDYKIQYDHIKKFMVLPKPDEVHFLLCIGLDPPLRQGQTRYPFVVMQFKADEEVTLD 317
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSY 346
L +E+EL KY+ KL P ++V+A I K + N+K+T P F H + CS
Sbjct: 318 LNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANKKVTTPAKDFTTHRQQYGIKCSI 377
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLHT 403
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ + FD + +K+G +
Sbjct: 378 KASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVGGAVSALSTFDITVHMKNGAGSS 437
Query: 404 -FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
FS+I +E+ L +F + K LRVKN T +D SSD+E A +
Sbjct: 438 QFSNINREDLKALEEFFKLKGLRVKNEIDDDTNLIAATLGDDDMASSDEE----AVGPKA 493
Query: 458 KREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ ++ ++ESDVAEEYDSN
Sbjct: 494 DRGSADEDEESVDEDFQA--------ESESDVAEEYDSN 524
>gi|426195782|gb|EKV45711.1| hypothetical protein AGABI2DRAFT_193658 [Agaricus bisporus var.
bisporus H97]
Length = 686
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 249/440 (56%), Gaps = 31/440 (7%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
+L P GK ++ + +K + V + D+ + W ++ + LR+ +++ +F
Sbjct: 12 SLAPDVGKFRVAPSGMAWKGSDSEAVVAMASTDIKWAQWLRVARNFQLRVGMRDHRKEKF 71
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF + DK+ S K +F I + +E+S +GWNWG T F G+ L+F V + AFE+PLR
Sbjct: 72 DGFMREDHDKLASLLKNHFGITLETREVSFKGWNWGVTDFQGSDLAFMVQDKVAFELPLR 131
Query: 135 DVSQC-TTGKNEVTVEFHPNDEAAESL----IEMRFYIP-------TNEIAG-------- 174
V+ G+ EV++EF P + +++L +E+RF++P T AG
Sbjct: 132 HVANSNIAGRTEVSLEFTPLGKGSKALGDEMMEIRFHVPGTQKSKATGSDAGSQKSDDEE 191
Query: 175 -DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
D + F D++ +A + +GD I F EI LTPRGRYD+ + + + +L GKT+DY
Sbjct: 192 DDISAAQVFHDTIKEKAELGQVSGDLILSFEEILVLTPRGRYDMDMSHEYLRLRGKTYDY 251
Query: 234 KIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
KI +++ ++F LP KD ++ F++ L PI+QGQTRY +L + F+++E EL +E+
Sbjct: 252 KIMYNSISKLFLLP-KDDQRVLFILGLSIPIRQGQTRYQYLVMQFSREEEITAELNMTEE 310
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYI 353
E+ KY+ +L K PT+EV++ + + + +KI GSF+ G + + KA G +
Sbjct: 311 EVA-KYD-RLKKNYEDPTFEVVSSVFRALAKKKIVGAGSFQSRDGHPGIKANLKAIQGDL 368
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLHTFSSIE 408
+ LE+ F+ K P+ + +I V F+R G S R+FD +I KSG HTF+SI
Sbjct: 369 FLLEKYIFFVSKSPLLVEIADIHQVVFSRVGASMGAAAARTFDLKIVTKSGAEHTFTSIN 428
Query: 409 KEEYGKLFDFIREKKLRVKN 428
KEE+ + ++++KK+++K
Sbjct: 429 KEEHESVDAYLKDKKIKIKT 448
>gi|298706803|emb|CBJ29726.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 645
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 315/630 (50%), Gaps = 52/630 (8%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-NGSLHRFAGFKE 79
G L++T + + + + +++ D+ W + LR+F+K + R GF +
Sbjct: 14 GNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSK 73
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ I F + + + + + G N+G + + N++ F N T F++ ++DVSQC
Sbjct: 74 AQHADIEKFL-SERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQC 132
Query: 140 TT----GKNEVTVEFH---PNDEAAESLIEMRFYIPTNEIAGDTD---PVEAFKDSVMNQ 189
N+V ++ H D+ ++L+ +R +P E DTD P E+ + +VM +
Sbjct: 133 VMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLP--EKDEDTDERSPAESLQMAVMER 190
Query: 190 ASVINATGDAIAVFNEIQCLT--PRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP 247
A++ + G + FNE Q PRGRY +++++ F ++HG +DYKI + + ++F L
Sbjct: 191 ANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLE 250
Query: 248 HKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKEL 307
D R FVISLD PI+QGQ +Y L L +DE + + + S ++L++KY+ L+ E+
Sbjct: 251 KPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAT-ITVNMSAEDLQKKYDSNLNSEM 309
Query: 308 SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPP 367
GP + ++AKI KV+ N+ + V G F G AV C+ A GY+YPL + FIFIHKP
Sbjct: 310 IGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPT 369
Query: 368 IHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLHT-----FSSIEKEEYGKLFD 417
I F+EI +V F R GG+ TR+FD + KS T FS I++ EY L+
Sbjct: 370 CIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYS 429
Query: 418 FIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTD 477
F+ KKLR+KN + N G DD D Y A + + E E+ D
Sbjct: 430 FLSTKKLRIKNIKESGNDNAMLQLGDLDDH---DPYKAALDDDQGED-------EESEDD 479
Query: 478 EDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDK 537
D+ PD S + + + K ++ T S K ++K +
Sbjct: 480 ADYAPDAR---------GGSDAESSSDSDGDEDSDDRAHKTSKKRPGTGSAKKGPTQKKR 530
Query: 538 ESSGGST------KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
S GGS+ KR KKDK+APK MSA+M + R ++K DNP + TEI+K GE
Sbjct: 531 ASGGGSSKPAPKKKRAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEK 590
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
W + +K Y +K ++ K Y AY
Sbjct: 591 WGKLDETQKKPYQDKADEDKARYKRERDAY 620
>gi|327297202|ref|XP_003233295.1| hypothetical protein TERG_06288 [Trichophyton rubrum CBS 118892]
gi|326464601|gb|EGD90054.1| hypothetical protein TERG_06288 [Trichophyton rubrum CBS 118892]
Length = 667
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 284/555 (51%), Gaps = 60/555 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G ++ ++ W + + L+I + + + GF++
Sbjct: 120 GKCKLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIISRTCGVIQLDGFEQD 179
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D+ FK + +++ +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 180 DFDRASKAFKIWYGVNLTNREHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSEISNTN 239
Query: 141 -TGKNEVTVEFH-PNDEAAES---------------------LIEMRFYIP--------- 168
G+NEV VEF P D+A+ + L+EMRFYIP
Sbjct: 240 LAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGLGRDELVEMRFYIPGTVTKKEEG 299
Query: 169 -------TNEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
N+ A + VE F +++M++A + + GD A F ++ LTPRGR+
Sbjct: 300 DEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 359
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
D+ ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL
Sbjct: 360 DMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLV 419
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FR 334
+ D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F
Sbjct: 420 MQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVIMPSRDFA 479
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++R+FD
Sbjct: 480 SHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSASRTFD 539
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
+ LK G H FS+I +EE L DF + K +R KN E E
Sbjct: 540 ITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVEEASTLIA------TALEN 593
Query: 451 DAYLARVKREAAERDDEDDEDED-ESTDEDFNPDQAESDVAEEYDSNPTPT--DSDEDSD 507
D + +A ++D ED ES DEDF D ++S+VAEE+DS + DSD + D
Sbjct: 594 DQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGD-SDSEVAEEFDSEHASSSGDSDAEMD 652
Query: 508 ASEGTKKKKKEKSRK 522
E + KKK K +K
Sbjct: 653 DIEEERPKKKTKVQK 667
>gi|326483746|gb|EGE07756.1| structure-specific recognition protein [Trichophyton equinum CBS
127.97]
Length = 637
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 284/555 (51%), Gaps = 60/555 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G ++ ++ W + + L+IF + + + GF +
Sbjct: 90 GKCKLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIFSRTCGVIQLDGFDQD 149
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D+ FK + +++ +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 150 DFDRASKAFKIWYGVNLTNREHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSEISNTN 209
Query: 141 -TGKNEVTVEFH-PNDEAAES---------------------LIEMRFYIP--------- 168
G+NEV VEF P D+++ + L+EMRFYIP
Sbjct: 210 LAGRNEVAVEFFLPTDDSSTAKEQPAGSTKNRGRKAGLGRDELVEMRFYIPGTVTKKEEG 269
Query: 169 -------TNEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
N+ A + VE F +++M++A + + GD A F ++ LTPRGR+
Sbjct: 270 DEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 329
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
D+ ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL
Sbjct: 330 DMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLV 389
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FR 334
+ D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F
Sbjct: 390 MQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVIMPSRDFA 449
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++R+FD
Sbjct: 450 SHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSASRTFD 509
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
+ LK G H FS+I +EE L DF + K +R KN E E
Sbjct: 510 ITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVEEASTLIA------TALEN 563
Query: 451 DAYLARVKREAAERDDEDDEDED-ESTDEDFNPDQAESDVAEEYDSNPTPT--DSDEDSD 507
D + +A ++D ED ES DEDF D ++S+VAEE+DS + DSD + D
Sbjct: 564 DQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGD-SDSEVAEEFDSEHASSSGDSDAEMD 622
Query: 508 ASEGTKKKKKEKSRK 522
E + KKK K +K
Sbjct: 623 DVEEERPKKKTKVQK 637
>gi|388855328|emb|CCF50992.1| probable POB3-protein that binds to DNA polymerase I [Ustilago
hordei]
Length = 557
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 236/453 (52%), Gaps = 43/453 (9%)
Query: 19 CPGKLKITDQNIVFK-NKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK---------- 67
PGKL+++ + +K + G I + W ++ + L I L
Sbjct: 17 TPGKLRMSQGGLGWKPSVGEGGTITIPADQMTSFQWIRVARNYQLAIHLNKDRETPCPAQ 76
Query: 68 -NGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNT 126
N F GF + +++ + + F + +E+S GWNWG K + + F V +
Sbjct: 77 VNPRRTNFDGFTRQDFERLSTHIRQYFNRSLETQEVSTTGWNWGQAKMSNHDVQFLVRDK 136
Query: 127 TAFEIPLRDVSQCTTGKNEVTVEF------HPNDEAAES-------LIEMRFYIPTNEIA 173
AFE+PL ++ K EV++EF P A +S L+EMR Y+P
Sbjct: 137 LAFELPLSHLANSNIAKTEVSMEFLNPEQQQPGANATKSSGNKGDQLVEMRLYLPGQAAK 196
Query: 174 ---------------GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
EAF +++ ++A + GD+I VF E+ LTPRGRYDI
Sbjct: 197 EDGSDAASAADGDDNNQETAAEAFHEALKSKADIGQVAGDSIVVFKEVLVLTPRGRYDID 256
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
+FN+F +L GKT+DYKI S++ ++F LP D VI LDP I+QGQTRY +L L F
Sbjct: 257 VFNTFIRLRGKTYDYKILYSSMNKLFLLPKSDEIHVMLVIGLDPSIRQGQTRYPYLVLQF 316
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTG 338
++E + EL EQ +++KY+GKL K PT+ ++ I KV+ +K+ P F +G
Sbjct: 317 PREEEMDAELNLDEQTIQDKYDGKLKKRYEEPTFRIVTNIFKVLSGQKVATPTDFESSSG 376
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
+++ C+ KAA G +YPLE+ +++ K P+++ + EI +R GG S+++FD +
Sbjct: 377 QTSIKCNLKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVASSKTFDLRVA 436
Query: 396 LKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
K G HTF SI +EE +L ++ E+K+R+KN
Sbjct: 437 TKGGTDHTFQSISREELDRLKAWLAERKVRIKN 469
>gi|402219834|gb|EJT99906.1| SSrecog-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 597
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 282/543 (51%), Gaps = 53/543 (9%)
Query: 1 MTEALEFQEVSSEFRGALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG 58
M+ F+ V F G L P G++++T + ++ T KV + + W ++
Sbjct: 1 MSALASFKNV---FHG-LSPEQGEMRLTHNGLAWQGSDTKKVVTVTKESMRAAQWTRVAR 56
Query: 59 TWALRIFLKNGSLHR-FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGN 117
+ LR+ L + F GF+ + +K+ K ++++ + +E+S RGWNWG +
Sbjct: 57 GFQLRLLLSSDKRRETFDGFEREDHEKLAHICKQHWELSLETREMSYRGWNWGEYDIQSD 116
Query: 118 VLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHPNDE------------AAESLIEMR 164
L+F V FEIPL ++ GK EV++EF ++ A + L+EMR
Sbjct: 117 DLAFLVATKPLFEIPLTSIANSNIAGKTEVSLEFLNPEQLKPDPAAPKRRRAGDELVEMR 176
Query: 165 FYIP-----------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRG 213
FY+P E + +AF + V +A + G+ I FN++ LTPRG
Sbjct: 177 FYVPGTVERDEGKEDDEEGEEEVSAAQAFYELVKKKAEIGQVLGEYIVEFNDVLLLTPRG 236
Query: 214 RYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHF 273
RYD+ +F +F +L GKT+DYKI ++V R+F LP D V+ LDPPI QGQTRY +
Sbjct: 237 RYDLDVFPTFVRLRGKTYDYKILHTSVTRLFLLPKPDDIHIQLVVGLDPPIHQGQTRYPY 296
Query: 274 LTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSF 333
L + F +++ E+EL +++L +KY GKL KE P +++++ I + + RK+ P +
Sbjct: 297 LVMQFTREDNLEVELKIDDEQL-QKYGGKLQKEYDAPVFQIVSNIFRALTGRKLQAPSDY 355
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSF 390
+ G S V + KA G +Y L++ IF+ K P + + +I T +F+R GG S ++F
Sbjct: 356 KSFNGQSGVKANMKATQGDLYFLDKNLIFVAKQPAVVDYADIHTASFSRVGGGMSSAKTF 415
Query: 391 DFEIELKS--GVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEK 448
D +I KS G L TFSSI KEE+ K+ +++R KK+RVKN + E + G S+DE
Sbjct: 416 DLQITQKSSTGDL-TFSSIPKEEHAKMEEYLRGKKVRVKNEMQEE---LAQVVGLSEDED 471
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
E +A R +D+ E+++ +D + D +PT EDS+
Sbjct: 472 EESMQDVASGEDAPRRGAGEDDSEEDADFQDSDSDGG------------SPTSGSEDSEP 519
Query: 509 SEG 511
+G
Sbjct: 520 DDG 522
>gi|310793168|gb|EFQ28629.1| structure-specific recognition protein [Glomerella graminicola
M1.001]
Length = 574
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 276/521 (52%), Gaps = 53/521 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ W + + ++I ++ + + GF++
Sbjct: 20 GKCRFAESGLGWKPAGGGDTFTLDHSNIASAQWSRAAKGYEIKILNRDSRIIQLDGFQQE 79
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + + KE ++RGWNWG +F LSF+V N AFEIP ++S
Sbjct: 80 DYERLAKIFKNWYSTALENKEHALRGWNWGKAEFGKAELSFNVQNRPAFEIPYSEISNTN 139
Query: 141 -TGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIP--------- 168
G+NEV VEF P D+ + L+EMRFYIP
Sbjct: 140 LAGRNEVAVEFSAPTDQNDTGTNGHLGGARGKGKKAGAGKDQLVEMRFYIPGTVKKEAEG 199
Query: 169 ----TNEIAGD--TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
++ AGD + V F D++M +A + GD IA F +I LTPRGR+DI ++++
Sbjct: 200 DDAGSDAGAGDEEKNAVTLFYDTLMEKAEIGETAGDTIATFLDILHLTPRGRFDIDMYDA 259
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI + + LP D + LDPP++QGQTRY F+ + F +DE
Sbjct: 260 SFRLRGKTYDYKIQYDAIKKFMVLPKPDETHVLLCVGLDPPLRQGQTRYPFIVMQFKKDE 319
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
++L +E++++E+Y+ +L P ++V+ I + + N+KIT P F+ H
Sbjct: 320 EVTIDLNLTEEQIEERYKDRLQPHYEQPLHQVITYIFRGLANKKITTPAKDFQTHRNQFG 379
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKS 398
+ CS KA+ G++Y LE+ F+F+ KP +I +E+ A++ F+R GG+ + FD +++K+
Sbjct: 380 IKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASITFSRVGGAVSALSTFDITVQMKN 439
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDF--GSSDDEKEPDAYLA 455
G + FS+I +E+ L +F R K LRVKN E + DD +E A
Sbjct: 440 GAGSSQFSNINREDLKGLEEFFRLKGLRVKNEIDEESNLIAAALREQAMDDSEEEVVGAA 499
Query: 456 RVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
+ R +A+ D+E +++ + ++ESDVAEE+DS+
Sbjct: 500 KADRGSADEDEESVDEDFRA--------ESESDVAEEFDSD 532
>gi|121711513|ref|XP_001273372.1| structure-specific recognition protein, putative [Aspergillus
clavatus NRRL 1]
gi|119401523|gb|EAW11946.1| structure-specific recognition protein, putative [Aspergillus
clavatus NRRL 1]
Length = 590
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 275/538 (51%), Gaps = 56/538 (10%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W ++ + L+I ++ + + GF +
Sbjct: 33 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRVAKGFELKILSRSSGVIQLDGFDQ 92
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I+V +E ++RGWNWG F L F+V N AFEIP ++S
Sbjct: 93 EDFERLSKAFKIWYGINVENREHALRGWNWGKADFTKAELVFNVQNRPAFEIPYSEISNT 152
Query: 140 T-TGKNEVTVEFHPNDEA-------------------AESLIEMRFYIPTNEIAGD---- 175
G+NEV VEF + + L+EMRFYIP + +
Sbjct: 153 NLAGRNEVAVEFALTSDGDANQPSGSTKNRGRKAAAGPDELVEMRFYIPGTAVKTEKGIK 212
Query: 176 ------------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
+ F +++M++A + + GD A F ++ LTPRGR+DI
Sbjct: 213 SENEEENGEEEEEEGGEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDI 272
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ S F+L GKT+DYKI +++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 273 DMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDELHTLIVLGLDPPLRQGQTRYPFLVMQ 332
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGH 336
DE +EL +++ L +Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 333 LKLDEEISLELNMTDELLASRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVSH 392
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
G S V CS KA G +Y L++ IF+ KP +++ E IA + +R GG ++R+FD
Sbjct: 393 HGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENIAVITMSRVGGAVSASRTFDIT 452
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA 452
+ LKSG+ H FS+I +EE L +F + K +R KN + +DD +
Sbjct: 453 VSLKSGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDTSALIAAALDNDDMISSEE 512
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSD-EDSDAS 509
R R +A+ D+E +++ E+ ++ESDVAEE+DS + SD E +DAS
Sbjct: 513 EGVRADRGSADEDEESVDEDFEA--------ESESDVAEEFDSAHESSGSDAEMNDAS 562
>gi|440636043|gb|ELR05962.1| hypothetical protein GMDG_01924 [Geomyces destructans 20631-21]
Length = 552
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 267/522 (51%), Gaps = 60/522 (11%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W K + ++I +N + + GF++
Sbjct: 16 GKCRFAENGFGWKPSGGGDTFTLDRSNIGGAQWSKASKGFEVKILQRNSGVVQLDGFQQD 75
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D++ FK + ++ KE ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 76 DFDRLTKVFKNWYSTNLETKEHALRGWNWGKAEFGKAELAFNVQNRPAFEIPYSEISNTN 135
Query: 141 -TGKNEVTVEFH---PNDEAA------------------ESLIEMRFYIPTNEIAGDT-- 176
GKNEV VEF DE A + L+EMRFYIP +T
Sbjct: 136 LAGKNEVAVEFSLPAGGDEGANGSLGGAKGKGKKAGAGKDQLVEMRFYIPGTTTKKETME 195
Query: 177 --------------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
+ F D++M +A + GD A F ++ LTPRGR+DI ++ S
Sbjct: 196 DGEAPSDAEDEEEQNAANLFYDTLMEKAEIGEVAGDTYATFLDVLHLTPRGRFDIDMYES 255
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI + + LP D I LDPP++QGQTRY FL + F +DE
Sbjct: 256 SFRLRGKTYDYKIQYEAIKKFMILPKPDELHFMICIGLDPPLRQGQTRYPFLVMQFKKDE 315
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
++L +E+ LKEKYE KL P ++V+ ++ + + +K+ P F H
Sbjct: 316 EVTIDLNMTEELLKEKYENKLAPHYEQPLHQVVTQVFRGLTGKKVNQPAKDFLSHHQQYG 375
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKS 398
+ CS KAA G++Y LE+ F+F+ KP +I ++ ++++ +R GG+ +R+FD I LK
Sbjct: 376 IKCSIKAAEGFLYCLEKAFMFVPKPATYIAYDSVSSITLSRVGGAISASRTFDIAIHLKG 435
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDA 452
G + FS+I +EE L +F + K LRVKN T ED SSD+ D
Sbjct: 436 GAGDSQFSNINREEQKPLEEFFKVKGLRVKNEMDEDTSILAAALGGEDLASSDE----DV 491
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYD 494
AR R +AE ++ES DEDF D +ESDVAEEYD
Sbjct: 492 VAARADRGSAEE-------DEESADEDFRTD-SESDVAEEYD 525
>gi|327350230|gb|EGE79087.1| hypothetical protein BDDG_02025 [Ajellomyces dermatitidis ATCC
18188]
Length = 556
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 271/547 (49%), Gaps = 80/547 (14%)
Query: 18 LCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGF 77
+ PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF
Sbjct: 1 MSPGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGF 60
Query: 78 KETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVS 137
++ + ++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 61 EQEDFERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEIS 120
Query: 138 QCT-TGKNEVTVEFH-PND---------------------EAAESLIEMRFYIPTNEI-- 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 121 NTNLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGAGRDELVEMRFYIPGTALKK 180
Query: 173 ----------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
A + + F +++M++A + + GD A F ++ LTPRGR+D
Sbjct: 181 EKPEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFD 240
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
I ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 241 IDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVM 300
Query: 277 LFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRG 335
D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F
Sbjct: 301 QLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVS 360
Query: 336 HTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDF 392
H G S V CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD
Sbjct: 361 HHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDI 420
Query: 393 EIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPD 451
+ LK G+ H FS+I +EE L +F + K +R KN +DD
Sbjct: 421 TMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE-------------MADDSS--- 464
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNP-------------DQAESDVAEEYDSNPT 498
A LA AA +D+ DED + D ++ESDVAEEYDS
Sbjct: 465 ALLA-----AALNNDDGSSDEDVAIGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHE 519
Query: 499 PTDSDED 505
+ S D
Sbjct: 520 SSGSGSD 526
>gi|398398738|ref|XP_003852826.1| hypothetical protein MYCGRDRAFT_70653 [Zymoseptoria tritici IPO323]
gi|339472708|gb|EGP87802.1| hypothetical protein MYCGRDRAFT_70653 [Zymoseptoria tritici IPO323]
Length = 560
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 279/540 (51%), Gaps = 63/540 (11%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK ++ + + +K G ++ +L + + + L+I+ + + + GFK+
Sbjct: 15 PGKCRLAESGLGWK-PVGGNSFTVDKAELQSAQFSRAARGYELKIYARTLGVVQLDGFKQ 73
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ + I FK + + +KE ++RGWNWG + N L+F+V N AFEIP ++S
Sbjct: 74 DDFETIQKCFKVWYGVPFEQKEHALRGWNWGKNEMGRNELTFNVRNQPAFEIPYTEISNT 133
Query: 140 T-TGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNE----- 171
GKNEV VEF P D A + L E+RFYIP E
Sbjct: 134 NLAGKNEVAVEFSLPADGDETGTNGSLGGARAKGRKMGGATDQLTEVRFYIPGTEKKAKN 193
Query: 172 ----------IAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
+ + F D++M++A + GD A F EI LTPRGR+DI ++
Sbjct: 194 SEEGDDAEDDDEEEHNAAGLFYDTLMSKAEIGEVAGDTYATFQEILHLTPRGRFDIDMYE 253
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI R F LP D V+ LDPP++QGQTRY FL + F ++
Sbjct: 254 SSFRLRGKTYDYKISYEHAKRFFLLPKPDDMHQLLVVGLDPPLRQGQTRYPFLVMQFKRE 313
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTS 340
E ++EL +++ L+ KY GKL + P V++KI + +++ P F H S
Sbjct: 314 EEVQIELNMTDELLQTKYAGKLQAKYEEPIGRVVSKIFHGLTGKRLLQPSPDFVSHHQQS 373
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ LE+ F+F+ KP +I+F++I +V +R GG ++R+FD + ++
Sbjct: 374 GVKCSIKANEGHLFCLEKAFLFVPKPATYIQFDQITSVTMSRVGGAVSASRTFDITVTMR 433
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKE-----DFGSSDDEKEPDA 452
SG H FS+I +EE L +F + K ++ KN G+ D SSDDE
Sbjct: 434 SGE-HQFSNINREEQAPLENFFKIKNIKTKNEMDGDTSMLVAAMNDPDLVSSDDE----- 487
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNP-TPTDSDEDSDASEG 511
E +D +++DES DEDF D ++SD AEEYDS+ + DSD + D ++G
Sbjct: 488 -------EVVAKDRGSADEDDESVDEDFQAD-SDSDPAEEYDSDAKSSGDSDAEMDDADG 539
>gi|321264830|ref|XP_003197132.1| subunit of the heterodimeric FACT complex; Pob3p [Cryptococcus
gattii WM276]
gi|317463610|gb|ADV25345.1| Subunit of the heterodimeric FACT complex, putative; Pob3p
[Cryptococcus gattii WM276]
Length = 586
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 281/538 (52%), Gaps = 47/538 (8%)
Query: 44 NGPDLDFVNWQKLVGTWALRIFLKNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKE 101
NG D+ W ++ + LR+ ++N R F GFK ++DKI + F I + ++
Sbjct: 43 NGSDIRHATWFRVARHFQLRLGMRNSEKPRISFDGFKRDDLDKIKRTLQEYFNITLETRD 102
Query: 102 LSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP-------- 152
S++GWNWG + G L F V TAF++PL V+ GKNEV +EF+P
Sbjct: 103 TSLKGWNWGEAQVKGTDLVFQVQGKTAFDVPLSQVANSNIAGKNEVALEFNPSSNYKFDP 162
Query: 153 ---NDEAAESLIEMRFYIP--TNEIAG-----------------DTDPVEAFKDSVMNQA 190
N + ++EMRFYIP + ++AG + +AF + +A
Sbjct: 163 KDLNKRPPDEMVEMRFYIPGKSMKMAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKA 222
Query: 191 SVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKD 250
+ GD+I VF + LTPRGR+ I+++ +L GK+ D+++P S++ R+F LP D
Sbjct: 223 DIGAVVGDSIVVFEDCLILTPRGRFSIEVYTDSIRLVGKSTDHRVPFSSIHRIFLLPKLD 282
Query: 251 GRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGP 310
V+ LDPPI+QG TRY FL + +DE EL +++EL + + L+K
Sbjct: 283 DLHVQLVLGLDPPIRQGATRYPFLVAQWPKDEVVNAELNLTDEELTQYPD--LEKTYEAT 340
Query: 311 TYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHI 370
T++V+++++K + +K+T PGS R G + + + KA G +Y LE+G IFI K PI I
Sbjct: 341 TFQVVSRVLKALTGKKVTPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILI 400
Query: 371 RFEEIATVNFARSGG---STRSFDFEIELKS-GVLHTFSSIEKEEYGKLFDFIREKKLRV 426
F + +++F+R GG S R+FD + K+ G H FS+I K+E G + F++ K +R+
Sbjct: 401 DFSKTDSISFSRVGGGVASARTFDMRVVSKTGGANHVFSAINKQEVGPISSFLQSKNIRL 460
Query: 427 KNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAE 486
KN + + E F D+E E + +R + ++D+ + + D++ + +
Sbjct: 461 KNEMEEATVDIDEPFSDDDEEMESP---SEDERPSKAKNDKSKTVKKSADDDEDESEDED 517
Query: 487 SDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGST 544
+ A +P+ +DSDEDS + E+ RK + K K KE+SG ++
Sbjct: 518 FEDASSDGGSPSESDSDEDSGMASDASDPMMEELRK-----KNQAKRAKAKETSGSAS 570
>gi|403412142|emb|CCL98842.1| predicted protein [Fibroporia radiculosa]
Length = 623
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 231/428 (53%), Gaps = 35/428 (8%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
L P GK +I + +K + + + + D+ + W ++ LRI LK+ S F
Sbjct: 11 GLSPEVGKFRIASSGMAWKGEDSENMMAMTAADIKWAQWMRVARNHQLRIGLKDRSRETF 70
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF---IGNVLSFDVNNTTAFEI 131
GF + DK+ K +F + + KE S +GWNWG T F G L+F V+N TAFE+
Sbjct: 71 DGFSREDHDKLAQLLKQHFSVTLETKETSFKGWNWGVTDFQGMFGQDLAFLVSNKTAFEL 130
Query: 132 PLRDVSQC-TTGKNEVTVEF---HPNDEAAES----LIEMRFYIPTNEI------AG--- 174
PL S G+ EV++EF N +AA + ++E+RFY+P AG
Sbjct: 131 PLDHASNSNIAGRTEVSLEFVTPSGNKKAARNAPDEMVEIRFYVPGTATRDRGSDAGSQK 190
Query: 175 -----DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGK 229
+ +AF D V +A + GD I F E+ LTPRGRYD+ +F F +L GK
Sbjct: 191 SDDEEEISAAQAFHDIVKEKAEIGQVAGDVILSFEEVLVLTPRGRYDVDMFPEFLRLRGK 250
Query: 230 TFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELP 289
T+DYKI ++ R+F LP KD + F++SL PI+QGQTRY +L + FN++E EL
Sbjct: 251 TYDYKILYGSISRLFLLP-KDDQHVLFILSLSTPIRQGQTRYQYLVMQFNREEEITAELN 309
Query: 290 FSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAA 349
SE+E+ KYE +L K PT+EV++ + + + +KI GSF+ H G + + KA
Sbjct: 310 MSEEEIA-KYE-RLKKNYEDPTFEVVSGVFRALSGKKIIGAGSFQSHDGHPGIKANLKAV 367
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFEIELKSGVLHTF 404
G ++ LE+ F+ K P I +I V F+R G + R+FD +I KSG +TF
Sbjct: 368 QGDLFLLEKYIFFVSKQPTLIELSDIHQVVFSRLGAGLGATAARTFDLKIVTKSGPEYTF 427
Query: 405 SSIEKEEY 412
+S+ KEE+
Sbjct: 428 TSVNKEEH 435
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 229/698 (32%), Positives = 360/698 (51%), Gaps = 66/698 (9%)
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
RF GF ++ D++ F+T + I + +S G +WG T L + +
Sbjct: 51 RFDGFPPSDFDRLTEAFQTMYGITLKRHSMSSAGASWGNTDIANKHLFEPRDGEEMLSLD 110
Query: 133 LRDVSQCT---TGKNEVTVEFHPND---EAAESLIEMRFYIPTNEIAGDTD-----PVEA 181
L +VSQC +NE+ ++F +D + L+ +RFY+P ++ A TD E
Sbjct: 111 LGEVSQCVLPGNNRNEIEMQFLESDTVEAGTDQLVAIRFYVPPDQDADPTDKDAPTSAEL 170
Query: 182 FKDSVMNQASVINATGDAIAVFNEIQ--CLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
+ + ASV +G IA F+E + LTPRGRY I++++SF +L G +DYKI
Sbjct: 171 LQSRITEVASVKKTSGAIIAEFDENKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDD 230
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ R+F LP +D FVI+LD PI+QGQ RY+ L + + E SE+ + + ++++Y
Sbjct: 231 ISRLFLLPKQDDMHMAFVIALDKPIRQGQQRYNMLVMQCTK-EQSELNINLDDATIEKEY 289
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
G++ ++G ++AK KVI +K+ +PG F + V C+ +A G++YPLE+
Sbjct: 290 NGEIQAHMNGSFSNLVAKTFKVITKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQ 349
Query: 360 FIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGVL-------HTFSSIEK 409
FIFIHKP + IRF+EI +V F R GSTR+FD + L + +TFS I+K
Sbjct: 350 FIFIHKPAVLIRFDEIESVEFQRYAGGQGSTRNFDLSVSLINTPGDNLAVKEYTFSGIDK 409
Query: 410 EEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD 469
Y L+ F+ +KK+R+KN E GS +EP AR E D+ +
Sbjct: 410 TNYASLYSFLSQKKIRIKNI---------EGIGS----EEP----ARSAPMYNEMDEGGE 452
Query: 470 EDEDESTDEDFNPDQAESDVAEEYDSNPTPTDS----DEDSDASEGTKKKKKEKSRKTIT 525
E + S DED+ DQA++ +EE S+ D +DSD +E +KK +KS+ +
Sbjct: 453 EMGESSEDEDY--DQAKASESEESSSDEDDDDDLGSMSDDSDLAE-HRKKAAKKSKDKSS 509
Query: 526 ISEKPRKSKKDKESS---GGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
EKP K DK S+ K+K+KD NAPK+ +SA+ + + R IK NP SF
Sbjct: 510 KKEKPSKKSADKGSNKRKEPEKKKKQKDPNAPKRGLSAFNFFTSAKRGDIKAANPDASFA 569
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY--KESGGGQDSDDGKTSKSKK 640
E+AK G +K +S+ EKA+Y+E K+ Y + +++Y E +SD KT+K
Sbjct: 570 ELAKLVGAEFKGLSASEKAKYEELAANDKKRYEKEMESYVPPEEDSDDESDGEKTTKKPS 629
Query: 641 P--------AKKKETASTAVSPHKVKSKEFIESNGSSSDSDDDKKASSKRKRDSDEDSKA 692
A K+ + + V++ + E N S D K+ R + DE KA
Sbjct: 630 AKKAKKDPNAPKRPMNPYMLFANSVRA-QVREENPDMSMGDVSKEIGI-RYKAIDEKEKA 687
Query: 693 KTKKKKEKSESESDSGESEKEKKSKSKPKGDKSKSKSK 730
K + K+++ + + E + K+KP+ +KS SK K
Sbjct: 688 KW---QSKADAAKEVYKKEMAQYEKTKPQTEKSPSKPK 722
>gi|261196620|ref|XP_002624713.1| FACT complex subunit pob3 [Ajellomyces dermatitidis SLH14081]
gi|239595958|gb|EEQ78539.1| FACT complex subunit pob3 [Ajellomyces dermatitidis SLH14081]
Length = 576
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 270/545 (49%), Gaps = 80/545 (14%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF++
Sbjct: 23 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQ 82
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 83 EDFERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNT 142
Query: 140 T-TGKNEVTVEFH-PND---------------------EAAESLIEMRFYIPTNEI---- 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 143 NLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGAGRDELVEMRFYIPGTALKKEK 202
Query: 173 --------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
A + + F +++M++A + + GD A F ++ LTPRGR+DI
Sbjct: 203 PEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDID 262
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 263 MYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQL 322
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHT 337
D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F H
Sbjct: 323 KLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHH 382
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEI 394
G S V CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD +
Sbjct: 383 GHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITM 442
Query: 395 ELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
LK G+ H FS+I +EE L +F + K +R KN +DD A
Sbjct: 443 TLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE-------------MADDSS---AL 486
Query: 454 LARVKREAAERDDEDDEDEDESTDEDFNP-------------DQAESDVAEEYDSNPTPT 500
LA AA +D+ DED + D ++ESDVAEEYDS +
Sbjct: 487 LA-----AALNNDDGSSDEDVAIGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESS 541
Query: 501 DSDED 505
S D
Sbjct: 542 GSGSD 546
>gi|169596308|ref|XP_001791578.1| hypothetical protein SNOG_00911 [Phaeosphaeria nodorum SN15]
gi|160701278|gb|EAT92406.2| hypothetical protein SNOG_00911 [Phaeosphaeria nodorum SN15]
Length = 573
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 282/567 (49%), Gaps = 71/567 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK
Sbjct: 25 PGATRFSDSGFGWK-PANGETYTCDQSQIISAQWSRAARGYEVKILSRNDGIIQLDGFKP 83
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FKT + I++ +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 84 DDFDRVSKLFKTWYGINLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 143
Query: 140 T-TGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------N 170
GKNEV V+F P D A + L+EMRFYIP N
Sbjct: 144 NLAGKNEVAVDFSLPADGDAGANGHLGGAKFRGKKSAGARDQLVEMRFYIPGVTTKKEKN 203
Query: 171 EIAGDTDPVE-----------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
E D E F +++M++A + GD A F +I LTPRGR+DI +
Sbjct: 204 EDGEDVSGAEDGDGEEQNAANLFYETLMDKAEIGEVAGDTFATFLDILHLTPRGRFDIDM 263
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F
Sbjct: 264 YESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFK 323
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
+DE ++L E L+ KY+ KL P V+A I + + +++T P F H
Sbjct: 324 RDEEVNLDLNMKEDLLESKYKDKLQSHYEAPIAVVVADIFRGLSGKRVTRPSRDFISHHE 383
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
S V CS KA G+++ L++ F+FI KP +I + IA+V +R GG ++R+FD
Sbjct: 384 QSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASVTMSRVGGAMAASRTFDITFT 443
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEK 448
+K G+ H FS+I +EE L +F R K ++ KN +G + ED SSDD
Sbjct: 444 MKGGMAEHQFSNINREEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDG- 502
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
A R +A+ +DES DEDF D +ES+V EE+DS+ + SD D++
Sbjct: 503 ------APANRGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDAEM 548
Query: 509 SEGTKKKKKEKSRKTITISEKPRKSKK 535
EG ++ + E+P+K K
Sbjct: 549 GEGGADSDAAEA----AVPERPKKKPK 571
>gi|239609535|gb|EEQ86522.1| FACT complex subunit pob3 [Ajellomyces dermatitidis ER-3]
Length = 579
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 270/545 (49%), Gaps = 80/545 (14%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF++
Sbjct: 26 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQ 85
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 86 EDFERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNT 145
Query: 140 T-TGKNEVTVEFH-PND---------------------EAAESLIEMRFYIPTNEI---- 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 146 NLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGAGRDELVEMRFYIPGTALKKEK 205
Query: 173 --------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
A + + F +++M++A + + GD A F ++ LTPRGR+DI
Sbjct: 206 PEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDID 265
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 266 MYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQL 325
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHT 337
D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F H
Sbjct: 326 KLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHH 385
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEI 394
G S V CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD +
Sbjct: 386 GHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITM 445
Query: 395 ELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
LK G+ H FS+I +EE L +F + K +R KN +DD A
Sbjct: 446 TLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE-------------MADDSS---AL 489
Query: 454 LARVKREAAERDDEDDEDEDESTDEDFNP-------------DQAESDVAEEYDSNPTPT 500
LA AA +D+ DED + D ++ESDVAEEYDS +
Sbjct: 490 LA-----AALNNDDGSSDEDVAIGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESS 544
Query: 501 DSDED 505
S D
Sbjct: 545 GSGSD 549
>gi|385305884|gb|EIF49827.1| dna polymerase delta binding protein [Dekkera bruxellensis
AWRI1499]
Length = 547
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 284/549 (51%), Gaps = 65/549 (11%)
Query: 19 CPGKLKITDQNIVFKNK----KTGKVEQINGPDLDFV--NWQKLVGTWALRIFLKNGSLH 72
PG++++ + + +K + T K P + + +W + + + I KN +
Sbjct: 15 LPGRMRLAESGLGWKAQTLPGSTAKTSPFLLPTEEILTTSWSRGSRGYEVCIDTKNRGVV 74
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
GF + + + + F I + ++E S+RGWNWG T+ N L F+V+N AFEIP
Sbjct: 75 MLDGFGKEDFASLKRELEKFFDIQLEQREHSLRGWNWGKTQLARNELVFNVSNKPAFEIP 134
Query: 133 LRDVSQC-TTGKNEVTVEFHPNDE-----AAESLIEMRFYIP------------------ 168
++ TGKNEV+VE D+ A + L+E++ +IP
Sbjct: 135 YSQIANTNMTGKNEVSVEMDLVDKSEIEKAGDELVELKLFIPGNMEKDEVEEINKKEEEE 194
Query: 169 -------TNEIAGDTDPVEA----FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
+N + P+ F D + +A + G+ I F E+ LTPRGRYDI
Sbjct: 195 QSKTDNGSNTTSDKIVPLRTKALYFYDELKEKADLGQVVGEMIVSFGEVLFLTPRGRYDI 254
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
+++SF +L GKT+DYK+ + R+F+LP DG ++ +DPP++QGQT+Y FLTL
Sbjct: 255 DMYDSFLRLRGKTYDYKVQYKQIQRIFSLPKVDGLHQLLILQVDPPLRQGQTKYSFLTLQ 314
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHT 337
F+ E E+EL + E ++K++ +L+K S TY V+ I K +R++ VPGSF
Sbjct: 315 FDSQEEIEVELNLDDDEYEKKWKTRLNKTYSNYTYMVLTSIFKGFTDRRVVVPGSFLTKD 374
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGSTRSFDFEIE 395
A++CS KA G++YPL++ IF+ KP I + F ++ V F+R + G+ ++FD E+
Sbjct: 375 SDVAISCSVKANEGHLYPLDKCLIFVTKPTILLPFSDVHEVVFSRVDTAGTHKTFDMEVV 434
Query: 396 LK-SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK G HTF +I+++E L F++ + LRV+N DEK +
Sbjct: 435 LKYGGGSHTFGNIDRKEQSALETFLKTRNLRVRN-----------------DEKIAQEMM 477
Query: 455 ARVKREAAERDDEDDEDEDE-STDEDFNP---DQAESDVAEEYDSNPTPTDSDEDSDASE 510
A + + D D DE S DEDF P +Q + D+AEEY S+ + + D+D D +
Sbjct: 478 AAALADDDDDGDLDLGSADEDSPDEDFKPGDENQEDDDIAEEYQSDVSASGXDDDEDMED 537
Query: 511 GTKKKKKEK 519
++KK K
Sbjct: 538 EEPERKKHK 546
>gi|50551567|ref|XP_503258.1| YALI0D25058p [Yarrowia lipolytica]
gi|74634196|sp|Q6C7V4.1|POB3_YARLI RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49649126|emb|CAG81462.1| YALI0D25058p [Yarrowia lipolytica CLIB122]
Length = 544
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 258/502 (51%), Gaps = 69/502 (13%)
Query: 53 WQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
W + + ++I KN F GF++ ++++ + K N+ I V ++E SV+GWNWG T
Sbjct: 61 WSRGSRGFEMKIQTKNRGAANFDGFEQDNLEELKNVMKRNYGISVEQREHSVKGWNWGKT 120
Query: 113 KFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFH-PND-EAAESLIEMRFYIP- 168
F + L F V N AFEIP +V+ GKNEV +EF P D A + L+EMRFY+P
Sbjct: 121 DFERSELVFSVANKPAFEIPYAEVANSNLVGKNEVALEFQQPADGRAGDELVEMRFYVPG 180
Query: 169 TNEIAGDTDP---------------------------------VEAFKDSVMNQASVINA 195
+ GD +P + F D++ +A +
Sbjct: 181 VTSVEGDENPKKKQKTEKEGEEGKEGDDDADADDESEEEVQSTAQIFYDTLKEKADIGAV 240
Query: 196 TGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNF 255
G A+ +EI + PRGRYDI ++ +F +L GKT+DY + V R+ LP D N
Sbjct: 241 AGTAVVSLSEIYLVIPRGRYDIDMYANFMRLRGKTYDYMVQYKHVQRLIVLPKPDDLHNI 300
Query: 256 FVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGK-LDKELSGPTYEV 314
V+ LDPP++QGQTRY FL + F ++ ++EL + E EKY K L + ++V
Sbjct: 301 LVVQLDPPLRQGQTRYPFLVMQFLREAEIKVELNVDDAEFAEKYADKGLKQSYDESAHQV 360
Query: 315 MAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEE 374
+ I + + RK+TVPGSF+ G + V+CS KA+ G++YPLER F+F+ K P+ I F E
Sbjct: 361 VGSIFRGLTGRKLTVPGSFKTVHGHAGVSCSLKASEGHLYPLERNFLFLSK-PVFIPFAE 419
Query: 375 IATVNFARSGGS---TRSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTG 430
I + +R G S +R+FD ++L++ + FS+I KEE L FI+ K +R+KN
Sbjct: 420 IQDITLSRVGSSVTTSRTFDMTLKLRNAQGEYQFSNISKEEQEGLEAFIKSKGIRLKN-- 477
Query: 431 KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPD-----QA 485
D E A LA E DD DD E + ++ + A
Sbjct: 478 ---------------DLAEEKALLAATLAEV--DDDSDDGGEFRGSADEDDESPDEDFHA 520
Query: 486 ESD--VAEEYDSNPTPTDSDED 505
ESD VAEE+DSN + +ED
Sbjct: 521 ESDSEVAEEFDSNAESSSGEED 542
>gi|225677920|gb|EEH16204.1| FACT complex subunit pob3 [Paracoccidioides brasiliensis Pb03]
Length = 611
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 273/548 (49%), Gaps = 71/548 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + ++ G ++ ++ W + + L+I ++ + + GF++
Sbjct: 55 PGKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQ 114
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D+ FK + I++ +E ++RGWNWG +F L+F+V N AFE+P ++S
Sbjct: 115 EDFDRTSKAFKIWYGINIENREHALRGWNWGKAEFTKAELTFNVQNRPAFELPYSEISNT 174
Query: 140 T-TGKNEVTVEFHPNDEAA----------------------ESLIEMRFYIPTNEI---- 172
GKNEV VEF +A + L+EMRFYIP +
Sbjct: 175 NLAGKNEVAVEFALPVDAVNGTNGQSEGSTKNRGRKAGAGRDELVEMRFYIPGTALKKEK 234
Query: 173 -----------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
A + + F +++M++A + + GD A F ++ LTPRGR+
Sbjct: 235 PEGEEGEGDEKSVQGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRF 294
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
DI ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL
Sbjct: 295 DIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLV 354
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FR 334
+ D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F
Sbjct: 355 MQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFV 414
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFD 391
H G S V CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD
Sbjct: 415 SHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFD 474
Query: 392 FEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEP 450
+ LK G+ H FS+I +EE L +F + K +R KN +DD
Sbjct: 475 ITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE-------------MADDSSAL 521
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDFNPD-------QAESDVAEEYDSNPTPTDSD 503
A A + E A D+E D + ++ ++ESDVAEEYDS + S
Sbjct: 522 IA--AALDNEDASSDEEMAAGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESSGSG 579
Query: 504 EDSDASEG 511
D++ +G
Sbjct: 580 SDAEVDDG 587
>gi|154312776|ref|XP_001555715.1| hypothetical protein BC1G_05089 [Botryotinia fuckeliana B05.10]
Length = 485
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 253/474 (53%), Gaps = 61/474 (12%)
Query: 96 DVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPND 154
++ KE ++RGWNWG +F + L F+V N AFEIP ++S GKNEV VEF P +
Sbjct: 23 NLEHKEHALRGWNWGKGEFGKSELVFNVQNRPAFEIPYTEISNTNLAGKNEVAVEFTPGN 82
Query: 155 E---------------------AAESLIEMRFYIPTN----------EIAGD------TD 177
+ L+EMRFYIP E +GD T+
Sbjct: 83 ADDTGTNGALGGARAKGKKSGAGKDQLVEMRFYIPGTAPKKGAREGEEDSGDEADGEETN 142
Query: 178 PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPI 237
F D++M +A + + GD +A F ++ LTPRGR+DI ++ S F+L GKT+DYKI
Sbjct: 143 ASTIFYDTLMEKAEIGDVAGDTVATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQY 202
Query: 238 STVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKE 297
+ + LP D I LDPP++QGQTRY FL + F +DE ++L +E +K+
Sbjct: 203 DNIKKFMVLPKPDELHFMICIGLDPPLRQGQTRYPFLVMQFKKDEEVTIDLNMTEDVMKD 262
Query: 298 KYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYIYPL 356
KY GKL P +EV+ ++ + + +KI P F H + CS KA+ G++Y L
Sbjct: 263 KYAGKLSIHYEQPLHEVVTQVFRGLAGKKINQPAKDFLSHHSQYGIKCSIKASEGFLYCL 322
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHT-FSSIEKEEY 412
E+ F+F+ KP +I +E+I + F+R GG+T R+FD + +K G T FS+I +EE
Sbjct: 323 EKAFMFVPKPATYITYEQITVITFSRVGGATSASRTFDIAVGMKGGAGETQFSNINREEQ 382
Query: 413 GKLFDFIREKKLRVKNTGKGEKPNY-----KEDFGSSDDEKEPDAYLARVKREAAERDDE 467
L DF + K +RVKN + + D SSD+E AR R +A+
Sbjct: 383 KNLEDFFKIKGIRVKNEMDEDNTAHIALLNNPDMQSSDEE----VVAARADRGSADE--- 435
Query: 468 DDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSD-EDSDASEGTKKKKKEKS 520
+DES DEDF D +ESDVAEEYDS + +D ED AS+G + KK K+
Sbjct: 436 ----DDESVDEDFKTD-SESDVAEEYDSAHESSGTDSEDEGASDGERPAKKAKT 484
>gi|294897373|ref|XP_002775953.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
gi|239882320|gb|EER07769.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
Length = 525
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 247/437 (56%), Gaps = 22/437 (5%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
+ L + V + R A G K + + ++N+ TG+ Q+N D+ V W K+ L
Sbjct: 8 DTLSYGTVRTAGRSA--TGLFKANHEMLGWRNRHTGQTTQLNKEDIASVAWYKVSKECLL 65
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
+I +KNG ++++ GF+++ + + +FFK ++ +D+ + ++S RGW WG + + G L
Sbjct: 66 KIVMKNGDIYKYDGFQDSNYETVKAFFKKHYGLDLKKDKVSTRGWCWGESSWSGTELKLK 125
Query: 123 VNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDEA---AESLIEMRFYIPTNEIAGDTDP 178
N A+EI D++Q TGKNEV +EFH +D ESL+EMRF+IP E A
Sbjct: 126 NGNEMAYEIQATDIAQVVPTGKNEVALEFHVDDTRDADDESLVEMRFFIPNEEYAA---- 181
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
KD ++ ++ + G + F I + PRG YD+ +F S F+L GK+FDY I
Sbjct: 182 --KLKDELIQKSGAASGGGTTVCQFLNIPIVLPRGHYDLDMFRSSFKLRGKSFDYTIKYM 239
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD-ETSEMELPFSEQELKE 297
V RMF LP D FV+ LD P++QG T Y FL + ++++ E ++ + ++EL+
Sbjct: 240 NVSRMFMLPKPDSVHISFVLGLDQPVRQGNTAYSFLVMQYDKEREVEDLAINLDDEELE- 298
Query: 298 KYEGKLDKELSG-PTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGYIYP 355
+ KL K ++G Y VM ++ K + + + P F+ G + V CS+KA G++YP
Sbjct: 299 --KCKLQKVVNGEKLYAVMGQLFKHMTGKNVVTPCQDFKASNGYNCVRCSHKANDGFLYP 356
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKS-GVLHTFSSIEKEE 411
L++ F+F++KP + IR++++ V F+R+ TR FD ++ K G H F +++ E
Sbjct: 357 LKKSFLFVNKPVMWIRYDDVLAVEFSRADSGFTQTRYFDLKVYRKGEGQPHDFQQMDRSE 416
Query: 412 YGKLFDFIREKKLRVKN 428
Y L +FI++ +R++N
Sbjct: 417 YNGLIEFIQKAGIRIRN 433
>gi|325092774|gb|EGC46084.1| FACT complex subunit pob3 [Ajellomyces capsulatus H88]
Length = 575
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 270/546 (49%), Gaps = 80/546 (14%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + ++ G ++ ++ W + + L+I ++ + + GF++
Sbjct: 23 GKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQE 82
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ ++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 83 DFERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTN 142
Query: 141 -TGKNEVTVEFH-PNDEAA---------------------ESLIEMRFYIPTNEI----- 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 143 LAGKNEVAVEFSLPADGVTGANGQLEGSTKNRGRKAGAGRDELVEMRFYIPGTALKKEKP 202
Query: 173 -------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
A + + F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 203 EGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 262
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 263 YESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQLK 322
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTG 338
D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F H G
Sbjct: 323 LDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHHG 382
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
S V CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD +
Sbjct: 383 HSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMT 442
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK G+ H FS+I +EE L +F + K +R KN +DD A +
Sbjct: 443 LKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE-------------MADDSS---ALI 486
Query: 455 ARVKREAAERDDEDDEDEDESTDEDFNP-------------DQAESDVAEEYDSNPTPTD 501
A AA +DE DED + D ++ESDVAEEYDS +
Sbjct: 487 A-----AALDNDEGSSDEDVAVGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESSG 541
Query: 502 SDEDSD 507
S D D
Sbjct: 542 SGSDVD 547
>gi|396467840|ref|XP_003838039.1| hypothetical protein LEMA_P120860.1 [Leptosphaeria maculans JN3]
gi|312214604|emb|CBX94595.1| hypothetical protein LEMA_P120860.1 [Leptosphaeria maculans JN3]
Length = 777
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 284/562 (50%), Gaps = 71/562 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK+
Sbjct: 230 PGATRFSDSGFGWKPAAGGETYTCDQSQIIQAQWSRAARGYEVKILSRNDGVIQLDGFKQ 289
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FKT + I++ +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 290 DDFERVSKVFKTWYGINLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 349
Query: 140 -TTGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------- 169
GKNEV V+F P D A + L+EMRFYIP
Sbjct: 350 NLAGKNEVAVDFSLPPDGDAGANGALGGARFRGKKSAGARDQLVEMRFYIPGVASKKEKN 409
Query: 170 --------NEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
E +T+ F +++M++A + GD A F +I LTPRGR+DI ++
Sbjct: 410 EDGEDASGGEEGEETNAASLFYETLMDKAEIGEVAGDTYATFLDILHLTPRGRFDIDMYE 469
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F +D
Sbjct: 470 SSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFKRD 529
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTS 340
E ++L E L+ KY+ KL P V++ I + + ++IT P F H S
Sbjct: 530 EEVNLDLNMKEDLLESKYKDKLQSHYEAPIAVVVSDIFRGLSGKRITRPSRDFISHHEQS 589
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ L++ F+FI KP +I + IA+V +R GG ++R+FD +K
Sbjct: 590 GVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASVTMSRVGGAMAASRTFDITFTMK 649
Query: 398 SGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEKEP 450
G+ H FS+I +EE L +F R K ++ KN +G + ED SSDD
Sbjct: 650 GGMAEHQFSNINREEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDG--- 706
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN--PTPTDSDE---- 504
A R +A+ +DES DEDF D +ES+V EE+DS+ + +DSDE
Sbjct: 707 ----APANRGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDEEMGG 754
Query: 505 -DSDASEGTKKKKKEKSRKTIT 525
DSDA E ++ K ++ ++
Sbjct: 755 ADSDAGESAAMPERPKKKQKVS 776
>gi|380495597|emb|CCF32272.1| FACT complex subunit pob-3 [Colletotrichum higginsianum]
Length = 570
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 272/520 (52%), Gaps = 52/520 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ W + + ++I ++ + + GF++
Sbjct: 19 GKCRFAESGLGWKPAGGGDTFTLDHSNIASAQWSRAAKGYEIKILNRDSRIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + + +E ++RGWNWG F LSF+V N AFEIP ++S
Sbjct: 79 DYERLAKIFKNWYSTALENREHALRGWNWGKADFGKAELSFNVQNRPAFEIPYSEISNTN 138
Query: 141 -TGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTN---EIAG 174
G+NEV VEF P D+ + L+EMRFYIP E G
Sbjct: 139 LAGRNEVAVEFSAPTDQNDTGTNGHLGGARGKGKKAGAGKDQLVEMRFYIPGTAKKEADG 198
Query: 175 D-----------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
D + V F D++M +A + GD IA F +I LTPRGR+DI ++++
Sbjct: 199 DDAGSDAGAEEEKNAVTLFYDTLMEKAEIGETAGDTIATFLDILHLTPRGRFDIDMYDAS 258
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
F+L GKT+DYKI + + LP D + LDPP++QGQTRY F+ + F ++E
Sbjct: 259 FRLRGKTYDYKIQYDAIKKFMVLPKPDETHVLLCVGLDPPLRQGQTRYPFIVMQFKKEEE 318
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAV 342
++L +E+++ E+Y+ +L P ++V+ I + + N+KIT P F+ H +
Sbjct: 319 VTIDLNLTEEQIDERYKDRLQPHYEQPLHQVITYIFRGLANKKITTPAKDFQTHRNQFGI 378
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSG 399
CS KA+ G++Y LE+ F+F+ KP +I +E+ A++ F+R GG+ + FD +++K+G
Sbjct: 379 KCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASITFSRVGGAVSALSTFDITVQMKNG 438
Query: 400 VLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDF--GSSDDEKEPDAYLAR 456
+ FS+I +E+ L +F R K LRVKN E + DD +E A+
Sbjct: 439 AGSSQFSNINREDLKGLEEFFRLKGLRVKNEIDEESNLIAAALREQAMDDSEEEVVGAAK 498
Query: 457 VKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ + ++ESDVAEE+DS+
Sbjct: 499 ADRGSADEDEESVDEDFRA--------ESESDVAEEFDSD 530
>gi|221486868|gb|EEE25114.1| structure specific recognition protein, putative [Toxoplasma gondii
GT1]
Length = 539
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 241/423 (56%), Gaps = 21/423 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG--TWALRIFL---KNGSLHRFA 75
G K++ +KN+KTG V Q D+ +W + G + LRI L KN + RF
Sbjct: 41 GLFKMSGDLFGWKNRKTGSVHQYKAADIVSASW-IMTGFDAYQLRILLGPHKNDLMVRFD 99
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
GF E + F +FK+ + + + RGW+WG K GN L V+ AF+I ++
Sbjct: 100 GFHEKNFADLSRHFDAHFKVKLQRGQQAYRGWHWGDVKMEGNNLQLTVDGCAAFDIHAQE 159
Query: 136 VSQCTT-GKNEVTVEFHPND---EAAESLIEMRFYIPTNEIAGDTD---PVEAFKDSVMN 188
++Q TT KN++ +E +D + + L+E+RFY P AGD D P++ K ++
Sbjct: 160 IAQVTTPSKNDLAIELIQDDTRDQQEDQLLEVRFYQP---FAGDDDAEGPLQQLKQKLVK 216
Query: 189 QASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPH 248
++ V D++A+ N++ L PRGRY+I I + HGK++DY I S++ RMF +P
Sbjct: 217 KSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHGKSYDYTIQYSSINRMFLVPR 276
Query: 249 KDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELS 308
+ F++SL+ ++QGQT Y F+ + F+ + +++ EL+++ L+K +
Sbjct: 277 PNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVDVNLEPAELQQR---GLEKLIE 333
Query: 309 GPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI 368
G T+ V+ ++ + +V + + VPG F+ + CSY+A +G++YPL R F+FI KP I
Sbjct: 334 GKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRAQSGHLYPLNRSFLFIVKPVI 393
Query: 369 HIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
IR++++ +V F+R+G ST R F F + ++ G + F+SI++ EY L DF+ EK +R+
Sbjct: 394 FIRYDDVVSVEFSRTGASTTNRFFAFTVSVRGGGEYEFTSIDRNEYKPLVDFLMEKGIRI 453
Query: 427 KNT 429
KN
Sbjct: 454 KNM 456
>gi|326475629|gb|EGD99638.1| FACT complex subunit pob3 [Trichophyton tonsurans CBS 112818]
Length = 539
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 271/523 (51%), Gaps = 60/523 (11%)
Query: 53 WQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
W + + L+IF + + + GF + + D+ FK + +++ +E ++RGWNWG
Sbjct: 24 WSRAAKGYELKIFSRTCGVIQLDGFDQDDFDRASKAFKIWYGVNLTNREHALRGWNWGKA 83
Query: 113 KFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFH-PNDEAAES----------- 159
+F LSF+V N AFE+P ++S G+NEV VEF P D+++ +
Sbjct: 84 EFGKAELSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDSSTAKEQPAGSTKNR 143
Query: 160 ----------LIEMRFYIP----------------TNEIAGDTDPVE------AFKDSVM 187
L+EMRFYIP N+ A + VE F +++M
Sbjct: 144 GRKAGLGRDELVEMRFYIPGTVTKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLM 203
Query: 188 NQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP 247
++A + + GD A F ++ LTPRGR+D+ ++ S F+L GKT+DYKI ++ + F LP
Sbjct: 204 DKAEIGDVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLP 263
Query: 248 HKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKEL 307
D + LDPP++QGQTRY FL + D+ ++L +++ L+ +Y+ KL+
Sbjct: 264 KNDDTHTLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHY 323
Query: 308 SGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKP 366
P ++V+ K+ + + +K+ +P F H G S V CS KA G ++ L++ F+F+ KP
Sbjct: 324 EEPIHQVVTKVFRGLSGKKVIMPSRDFASHHGHSGVKCSTKANEGLLFCLDKSFMFVPKP 383
Query: 367 PIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREK 422
+I+ E I+ + +R GG ++R+FD + LK G H FS+I +EE L DF + K
Sbjct: 384 ATYIQIENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAK 443
Query: 423 KLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED-ESTDEDFN 481
+R KN E E D + +A ++D ED ES DEDF
Sbjct: 444 NIRFKNEMVEEASTLIA------TALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFV 497
Query: 482 PDQAESDVAEEYDSNPTPT--DSDEDSDASEGTKKKKKEKSRK 522
D ++S+VAEE+DS + DSD + D E + KKK K +K
Sbjct: 498 GD-SDSEVAEEFDSEHASSSGDSDAEMDDVEEERPKKKTKVQK 539
>gi|294944207|ref|XP_002784140.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
gi|239897174|gb|EER15936.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
Length = 521
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 255/458 (55%), Gaps = 26/458 (5%)
Query: 3 EALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWAL 62
+ L + V + R A G K + + ++N++TG+ Q+N D+ V W K+ L
Sbjct: 7 DTLSYGTVKTAGRSA--TGLFKANHEMLGWRNRQTGQTTQLNKEDIASVTWYKVNKECLL 64
Query: 63 RIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
+I +KNG ++++ GF+++ + + +FF ++ +D+ ++++S RGW WG + + G L
Sbjct: 65 KIVMKNGDIYKYDGFQDSNYETVKAFFNKHYDLDLKKEKVSTRGWCWGESSWSGTELELK 124
Query: 123 VNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDEA---AESLIEMRFYIPTNEIAGDTDP 178
AFEI D++Q TGKNEV +EFH +D ESL+EMRF+IP E A
Sbjct: 125 NAGQVAFEIQATDIAQVVPTGKNEVALEFHVDDTRDADDESLVEMRFFIPNEEYAA---- 180
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
KD ++ ++ G I F I + PRG YD+ +F S F+L GK+FDY I
Sbjct: 181 --KLKDELIQKSGAATGGGTTICQFLNIPIVLPRGHYDLDMFRSSFKLRGKSFDYTIKYM 238
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD-ETSEMELPFSEQELKE 297
V RMF LP D FV+ LD P++QG T Y FL + ++++ E ++ + +EL+
Sbjct: 239 NVSRMFMLPKPDSVHVSFVLGLDQPVRQGNTAYSFLVMQYDKEREVEDLAINLDAEELE- 297
Query: 298 KYEGKLDKELSG-PTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGYIYP 355
+ KL K ++G Y VM ++ K + + + P F+ G + V CS+KA G++YP
Sbjct: 298 --KCKLQKVVNGEKLYAVMGQLFKHMTGKNVVTPCQDFKASNGYNCVRCSHKANDGFLYP 355
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGS---TRSFDFEIELKS-GVLHTFSSIEKEE 411
L++ F+F++KP + IR++++ V F+R+ TR FD ++ K G H F +++ E
Sbjct: 356 LKKSFLFVNKPVMWIRYDDVLAVEFSRADSGFTQTRYFDLKVYRKGEGQPHDFQQMDRSE 415
Query: 412 YGKLFDFIREKKLRVKN---TGKGEKPNYKEDFGSSDD 446
Y L +FI++ +R++N +G G ++D GSS D
Sbjct: 416 YNGLIEFIQKAGIRIRNLEGSGLGLGKRSRDD-GSSPD 452
>gi|237831963|ref|XP_002365279.1| structure specific recognition protein I, putative [Toxoplasma
gondii ME49]
gi|211962943|gb|EEA98138.1| structure specific recognition protein I, putative [Toxoplasma
gondii ME49]
gi|221506561|gb|EEE32178.1| structure specific recognition protein, putative [Toxoplasma gondii
VEG]
Length = 539
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 241/423 (56%), Gaps = 21/423 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG--TWALRIFL---KNGSLHRFA 75
G K++ +KN+KTG V Q D+ +W + G + LRI L KN + RF
Sbjct: 41 GLFKMSGDLFGWKNRKTGSVHQYKAADIVSASW-IMTGFDAYQLRILLGPHKNDLMVRFD 99
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
GF E + F +FK+ + + + RGW+WG K GN L V+ AF+I ++
Sbjct: 100 GFHEKNFADLSRHFDAHFKVKLQRGQQAYRGWHWGDVKMEGNNLQLTVDGCAAFDIHAQE 159
Query: 136 VSQCTT-GKNEVTVEFHPND---EAAESLIEMRFYIPTNEIAGDTD---PVEAFKDSVMN 188
++Q TT KN++ +E +D + + L+E+RFY P AGD D P++ K ++
Sbjct: 160 IAQVTTPSKNDLAIELIQDDTRDQQEDQLLEVRFYQP---FAGDDDAEGPLQQLKQKLVK 216
Query: 189 QASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPH 248
++ V D++A+ N++ L PRGRY+I I + HGK++DY I S++ RMF +P
Sbjct: 217 KSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHGKSYDYTIQYSSINRMFLVPR 276
Query: 249 KDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELS 308
+ F++SL+ ++QGQT Y F+ + F+ + +++ EL+++ L+K +
Sbjct: 277 PNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVDVNLEPAELQQR---GLEKLIE 333
Query: 309 GPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI 368
G T+ V+ ++ + +V + + VPG F+ + CSY+A +G++YPL R F+FI KP I
Sbjct: 334 GKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRAQSGHLYPLNRSFLFIVKPVI 393
Query: 369 HIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
IR++++ +V F+R+G ST R F F + ++ G + F+SI++ EY L DF+ EK +R+
Sbjct: 394 FIRYDDVVSVEFSRTGASTTNRFFAFTVSVRGGGEYEFTSIDRNEYKPLVDFLMEKGIRI 453
Query: 427 KNT 429
KN
Sbjct: 454 KNM 456
>gi|366999078|ref|XP_003684275.1| hypothetical protein TPHA_0B01680 [Tetrapisispora phaffii CBS 4417]
gi|357522571|emb|CCE61841.1| hypothetical protein TPHA_0B01680 [Tetrapisispora phaffii CBS 4417]
Length = 567
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 270/535 (50%), Gaps = 74/535 (13%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ ++ D + +K +G + P +L + W + + L+I KN +
Sbjct: 17 GRFRVADSGLGWKASSSGGSAANKAKAPFLLPATELSTIQWSRGCRGYELKINTKNQGVL 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF E + D I S F F I + KE S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSEDDFDAIKSDFHRRFNIQLEHKEHSLRGWNWGKTDLARNEMIFSLNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP---------TNEIAGDT-- 176
++ T KNEV +EF DE A + L+EMRFYIP +I ++
Sbjct: 137 YSRINNTNLTNKNEVAIEFDIQDEEYQPAGDELVEMRFYIPDAIKEEESENEQIKSESAE 196
Query: 177 ------------------------------DPVEAFKDSVMNQASVINATGDAIAVFNEI 206
E F + + +A + GD I F +I
Sbjct: 197 GAVKAEGAVKTENEEDVEMSENEREEFEEKSMAETFYEELKEKADIGETAGDVIVSFPDI 256
Query: 207 QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQ 266
TPRGRYDI I+ + +L GKT++YK+ + ++ +LP D + V+S++PP++Q
Sbjct: 257 FFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQKIISLPKVDDIHHLIVLSIEPPLRQ 316
Query: 267 GQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRK 326
GQT Y ++ L F +DE +E++L + + +E ++ L K+ T+ V++ ++K + R+
Sbjct: 317 GQTSYPYVVLQFQKDEETEVQLNLDDADYEENFKDTLKKQYDAKTHIVISHVLKGLTGRR 376
Query: 327 ITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS 386
+ VPGS++ AV+CSYKA GY+YPL+ F+F+ KP ++I F ++++VN +R+G S
Sbjct: 377 VIVPGSYKSKYDNCAVSCSYKANEGYLYPLDNAFLFLTKPTLYIPFSDVSSVNISRAGQS 436
Query: 387 T--RSFDFEIELK--SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFG 442
T R+FD EI L+ G + TF +I KEE L F+ K L+V+N K + + G
Sbjct: 437 TTSRTFDLEIVLRFNRGSV-TFGNISKEEQQLLELFLTSKSLKVRNEEKESEQRLQTALG 495
Query: 443 SSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNP-DQAESDVAEEYDSN 496
S D+ + + +A D DES DE+F + DVAEE+DS+
Sbjct: 496 SDSDDGD-------INMGSAGED-------DESADEEFQASSDDDDDVAEEFDSD 536
>gi|451852199|gb|EMD65494.1| hypothetical protein COCSADRAFT_35534 [Cochliobolus sativus ND90Pr]
Length = 561
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 282/565 (49%), Gaps = 70/565 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK+
Sbjct: 15 PGATRFSDSGFGWK-PANGETYTCDQSQIIQAQWSRAARGYEVKILSRNDGIIQLDGFKQ 73
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FKT + I + +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 74 EDFDRVAKVFKTWYGISLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 133
Query: 140 T-TGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------- 169
GKNEV V+F P D A + L+EMRFYIP
Sbjct: 134 NLAGKNEVAVDFSLPADSDSGANGQLGGARFRGKKSAGARDQLVEMRFYIPGLASKKEKT 193
Query: 170 --------NEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
E +T+ F +++M +A + GD A F +I LTPRGR+DI ++
Sbjct: 194 EDGEDASGAEDGEETNAANLFYETLMEKAEIGEVAGDTFATFLDILHLTPRGRFDIDMYE 253
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F +D
Sbjct: 254 SSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFKRD 313
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTS 340
E ++L L++KY+ KL P V+A I + + ++IT P F H S
Sbjct: 314 EEVNLDLNMKGDLLEDKYKDKLQSHYEAPIATVVADIFRGLSGKRITRPSRDFISHHEQS 373
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ L++ F+FI KP +I + I +V +R GG ++R+FD +K
Sbjct: 374 GVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIQSVTMSRVGGAMAASRTFDITFTMK 433
Query: 398 SGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEKEP 450
+G+ H FS+I +EE L +F R K ++ KN +G + ED SSDD
Sbjct: 434 NGMAEHQFSNINREEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDG--- 490
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE 510
A R +A+ +DES DEDF D +ES+V EE+DS+ + SD D++ +
Sbjct: 491 ----APANRGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDAEMDD 538
Query: 511 GTKKKKKEKSRKTITISEKPRKSKK 535
+ ++ + E+P+K +K
Sbjct: 539 AESEGDAAEA-----VPERPKKKQK 558
>gi|301100516|ref|XP_002899348.1| FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4]
gi|262104265|gb|EEY62317.1| FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4]
Length = 537
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 248/426 (58%), Gaps = 21/426 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG--TWALRIFLKNGSLHRFAGFK 78
G L ++ ++++++ T +++ D+ + W VG T L+++ K G RF G K
Sbjct: 16 GVLVLSASGLLWRSRTTESQKKLLKDDIVTLLWTP-VGPKTHHLKVYQKGGKYVRFTGLK 74
Query: 79 ETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQ 138
++ ++ S + +F ++ +++++ G NWG KF G L+F N + E+PL +SQ
Sbjct: 75 AQDVAQLKSHVEIHFDRELEQEKVAAGGGNWGDMKFEGPNLNFRTANASVMELPLEQISQ 134
Query: 139 CTT-GKNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVIN 194
C GKNEV ++FH +D A E+L+EMR Y+P + + E F+ V+ +A++ +
Sbjct: 135 CALPGKNEVELQFHEDDTVAGDEETLVEMRLYLPPGDGEEEVVTAEEFRQEVLEKANIRS 194
Query: 195 ATGDAIAVFNEI--QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGR 252
G +I +E LTPRGRY ++I+ SF ++HGKTFDYKI S + R F L +G
Sbjct: 195 VMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGI 254
Query: 253 QNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTY 312
FVISL+ PI+QG+ Y L L ++++ +++ S +E+K KY G + + +SG
Sbjct: 255 NTAFVISLEEPIRQGKQGYPHLVLQLSKNDV-HIDVNMSSEEIK-KYNGNIHERMSGALP 312
Query: 313 EVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRF 372
+++A + K I+ +K+ G F+ H+G AV C+ KA +G ++PLE+ F+FIHKP IR+
Sbjct: 313 QIVATLFKFIIGKKVYTSGKFKTHSGERAVKCAVKAQSGVLFPLEKSFMFIHKPTTFIRY 372
Query: 373 EEIATVNFARSGG-----STRSFDFEIELKS-----GVLHTFSSIEKEEYGKLFDFIREK 422
EEI + F R G ++R+FD + KS + FS+I++ E+ +L F+ K
Sbjct: 373 EEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGEAAREYIFSAIDRREFPELSQFLTSK 432
Query: 423 KLRVKN 428
KLR++N
Sbjct: 433 KLRIRN 438
>gi|344234732|gb|EGV66600.1| SSrecog-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 250/457 (54%), Gaps = 40/457 (8%)
Query: 95 IDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHPN 153
+ + KE S+RGWNWG T N L F +N +FEIP +++ TGKNEV VE +
Sbjct: 1 MSLEHKEHSLRGWNWGKTDLARNELIFSINGKPSFEIPYSEINNSNLTGKNEVAVELNLE 60
Query: 154 DEAAES---LIEMRFYIPT---NEIAGDT--------------------DPVEAFKDSVM 187
A+++ L+EMRFY+P NE T F + +
Sbjct: 61 TSASKAGDELVEMRFYVPGVVENETKTVTKVKNEEGEEKEHEEAEIEEISAASVFYEQLK 120
Query: 188 NQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP 247
+ A++ G+AI F+++ LTPRGRYDI ++ + +L GKT+DYKI + R+F+LP
Sbjct: 121 DNANIGQVAGEAIVSFSDVLFLTPRGRYDIDMYPTSLRLRGKTYDYKIQYKQIERIFSLP 180
Query: 248 HKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKEL 307
D + V+ +DPP++QGQTRY FL L F ++E E+EL SE++ K KYEGKL K
Sbjct: 181 KPDETHHLVVLQIDPPLRQGQTRYPFLVLQFAREEEIEVELNLSEEDYKSKYEGKLKKRY 240
Query: 308 SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPP 367
T+ VM+ K + R++ PGSF+ V C+ KA+ GY+YPL+R F+F+ KP
Sbjct: 241 DAETHLVMSHCFKGLTERRLIAPGSFQSRFLQPGVACNLKASEGYLYPLDRCFLFVTKPT 300
Query: 368 IHIRFEEIATVNFARSG---GSTRSFDFEIELK-SGVLHTFSSIEKEEYGKLFDFIREKK 423
++I F E++ + +R+G ++R+FD EI L+ S H F SI++EE + + +K
Sbjct: 301 VYIPFSEVSNIVMSRTGTGVSASRTFDLEINLRSSNQSHVFGSIDREEQASIESYCVQKG 360
Query: 424 LRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPD 483
LR+KN K K + + D+ E D A E + E+D D + +D
Sbjct: 361 LRIKNEEKVAKAMMAKALNEAADDDEDDDDADIDMGSAGEEESEEDGDFNSGSD------ 414
Query: 484 QAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKS 520
SD AEE+DS+ + + SD+++ + G KKK KS
Sbjct: 415 ---SDPAEEFDSDASLSGSDDENMSEGGEPAKKKTKS 448
>gi|449298844|gb|EMC94859.1| hypothetical protein BAUCODRAFT_565015 [Baudoinia compniacensis
UAMH 10762]
Length = 490
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 234/456 (51%), Gaps = 48/456 (10%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK ++ + + +K G+ ++ ++ W + + L++ +N + + GF++
Sbjct: 15 PGKCRLAESGLGWK-PSGGQTFTLDKSEMITAQWSRAARGYELKVIARNQGVIQLDGFRQ 73
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D + FK + +++ KE ++RGWNWG T+ N L+F+V N AFEIP ++S
Sbjct: 74 DDFDTVQKCFKVWYAVELVHKEHALRGWNWGKTEMGRNELTFNVRNQPAFEIPYTEISNT 133
Query: 140 -TTGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNEI---- 172
GKNEV VEF P D A + L EMRFYIP E
Sbjct: 134 NLAGKNEVAVEFSLPADGEETGTNGHLGGARSKGRKMGGAVDQLTEMRFYIPGTETRKGR 193
Query: 173 ---------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
D + F +++M++A + GD A F +I LTPRGR+DI
Sbjct: 194 KKDQEDGADEEDEGEEEDANAANVFYETLMDKAEIGEVAGDTFATFLDILHLTPRGRFDI 253
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ F+L GKT+DYKI R F LP D + I LDPP++QGQTRY F+ +
Sbjct: 254 DLYEKSFRLRGKTYDYKISYDNAKRFFVLPKPDDVHSLLCIGLDPPLRQGQTRYPFIVMQ 313
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGH 336
F +DE +EL ++ L+ KY GKL P V+A+I + +K+ P F H
Sbjct: 314 FKRDEEVNIELNMTDDALQTKYAGKLQPRYEAPIGTVIARIFHGLTGKKLFQPSPLFVSH 373
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
S V CS KA G++Y L+R F+F+ KP +I FE +A + +R GG ++R+FD
Sbjct: 374 HQQSGVKCSIKANEGHLYCLDRAFLFVPKPATYISFENVAVITMSRVGGAVSASRTFDIT 433
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN 428
+ L++G H FS+I +EE L +F + K L+ KN
Sbjct: 434 VALRNGAGEHQFSNINREEQNPLEEFFKAKGLKTKN 469
>gi|348667228|gb|EGZ07054.1| hypothetical protein PHYSODRAFT_348389 [Phytophthora sojae]
Length = 540
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 289/510 (56%), Gaps = 31/510 (6%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG--TWALRIFLKNGSLHRFAGFK 78
G L ++ ++++++ T +++ D+ + W VG T L+++ K G RF G K
Sbjct: 16 GVLVLSASGLLWRSRTTESQKKLLKDDIVTLLWTP-VGPKTHHLKVYQKGGKYVRFTGLK 74
Query: 79 ETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQ 138
++ ++ S +++F ++ +++++ G NWG KF G L+F +N + E+PL +SQ
Sbjct: 75 AQDVQQLKSHVESHFDRELEQEKVAAGGGNWGDMKFEGPNLNFRTSNASVMELPLEQISQ 134
Query: 139 CTT-GKNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVIN 194
C GKNEV ++FH +D A E+L+EMR Y+P + + E F+ V+ +A++ +
Sbjct: 135 CALPGKNEVELQFHEDDTVAGDEETLVEMRLYLPPGDGEDEVVTAEEFRQQVLEKANIRS 194
Query: 195 ATGDAIAVFNEI--QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGR 252
G +I +E LTPRGRY ++I+ SF ++HGKTFDYKI S + R F L +G
Sbjct: 195 VMGKSIVDLDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGL 254
Query: 253 QNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTY 312
FVISL+ PI+QG+ Y L L ++++ +++ S +E+K KY G + + +SG
Sbjct: 255 NTAFVISLEEPIRQGKQGYPHLVLQLSKNDV-HIDVNMSAEEIK-KYNGNIHERMSGALP 312
Query: 313 EVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRF 372
+++A + K I+ +K+ G F+ H+G AV C+ KA +G ++PLE+ F+FIHKP IR+
Sbjct: 313 QIVATLFKFIIGKKVYTSGKFKTHSGDRAVKCAVKAQSGVLFPLEKSFMFIHKPTTFIRY 372
Query: 373 EEIATVNFARSGG-----STRSFDFEIELKS-----GVLHTFSSIEKEEYGKLFDFIREK 422
EEI + F R G ++R+FD + KS + FS+I++ E+ +L F+ K
Sbjct: 373 EEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGEAAREYIFSAIDRREFPELSQFLTSK 432
Query: 423 KLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNP 482
KLR++N K ++ + +++ + Y E ++ + ED+++ D DF P
Sbjct: 433 KLRIRNL----KESHGAGAPAGSKKRDFNEY-----LEELGPEEGEIEDDEDEEDSDFGP 483
Query: 483 DQAESDVAEEYDSNPTPTDSDEDSDASEGT 512
++ S+ ++ D + DSDE+ DA EG
Sbjct: 484 GESGSESSDYSDEELSGKDSDEE-DAEEGE 512
>gi|242803647|ref|XP_002484217.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717562|gb|EED16983.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 499
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 245/480 (51%), Gaps = 92/480 (19%)
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + + + ++E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 3 DFERLSRAFKVWYGVAIEQREHAIRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTN 62
Query: 140 TTGKNEVTVEFH-PNDEAA-------------------ESLIEMRFYIPTNEIA-----G 174
GKNEV VEF P DE A + L+EMRFYIP + G
Sbjct: 63 LAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGPDELVEMRFYIPGTALKKEKAEG 122
Query: 175 D-----------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDI 217
D + F +++M++A + + GD A F ++ LTPRGR+DI
Sbjct: 123 DGAKKEGSEEEGEEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDI 182
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
++ + F+L GKT+DYKI S++ + F LP D V+ LDPP++QGQTRY FL +
Sbjct: 183 DMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEMHTLIVLGLDPPLRQGQTRYPFLVMQ 242
Query: 278 FNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGH 336
DE +EL +E+ L+E+Y+ KL+ P ++V+ KI + + +K+ +P F H
Sbjct: 243 LKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIHQVITKIFRGLSGKKVIMPSKDFVSH 302
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFE 393
G S V CS KA G +Y L++ +F+ KP +++ E I+ V +R GG ++R+FD
Sbjct: 303 HGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQIENISVVTMSRVGGAISASRTFDIT 362
Query: 394 IELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA 452
+ LK G+ H FS+I +EE L +F + K +R+KN DD
Sbjct: 363 VSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIKNE-------------MVDDS----- 404
Query: 453 YLARVKREAAERDDEDDEDEDESTDEDFNPDQ-----------------AESDVAEEYDS 495
A + + A E D D STDED PD+ ++SDVAEEYDS
Sbjct: 405 --AALIKAALEND-------DLSTDEDVRPDRGSADEDEESVDEDFHADSDSDVAEEYDS 455
>gi|340383933|ref|XP_003390470.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Amphimedon
queenslandica]
Length = 410
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 244/398 (61%), Gaps = 31/398 (7%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++LKEKY GKL +E+ GP EV A++MKV+V +K+ VPGSF+ + G +AV CS KA AG+
Sbjct: 1 EDLKEKYGGKLTQEMEGPLMEVFARLMKVLVGKKLMVPGSFKNNNGQNAVACSCKATAGF 60
Query: 353 IYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGSTRSFDFEIELKSGVLHTFSSIEKE 410
+YPLE+GF+F+HKP + I+FE+IA VNFAR SGG +RSFDF+IE + GV+H FSS+ ++
Sbjct: 61 LYPLEKGFMFVHKPALFIKFEDIANVNFARMASGGVSRSFDFDIETREGVVHHFSSLMRD 120
Query: 411 EYGKLFDFIREKKLRVKNTGKGE-KPNYKEDF-GSSDDEKEPDAYLARVKREAAERDDED 468
+Y +L +F+ EK+L++K+ G + +Y ++ G+S DE +P YLAR+K E + ED
Sbjct: 121 DYTRLHEFVTEKRLKIKDKGSSKVHVSYNDELSGNSSDEHDP--YLARMKAEGEQASSED 178
Query: 469 DEDEDES-TDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKS-RKTITI 526
+ + + T DF ++ SD EYDS+ +D A + TK E +
Sbjct: 179 GKSSNTTYTYSDFVAKESGSDDDLEYDSDAAVSDGGSTQGAQKETKGSSDESGEEEEEEE 238
Query: 527 SEKPRKSKKDKESSGGSTKRKKK---------------DKNAPKKPMSAYMMWFNDMREK 571
E+P+ K+ K + + +K+K D N PKKP+S+YM+W +MR
Sbjct: 239 EEEPKAKKRSKPQTHTNVAKKRKQEKGGATGKKEKKKKDPNCPKKPLSSYMLWLQEMRPS 298
Query: 572 IKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD 631
+KK +P +S TE++KK G+LWK + K+K++++EK K KE Y +K Y+ +G
Sbjct: 299 LKKKHPELSITEMSKKAGQLWKEL--KDKSKWEEKAKKLKEQYLIDMKEYERTG------ 350
Query: 632 DGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSS 669
+S S KK + S + S + KSKE+I+S SS
Sbjct: 351 KAPSSASSSKPKKTTSKSASASKTQFKSKEYIDSEESS 388
>gi|401406796|ref|XP_003882847.1| putative structure specific recognition protein I [Neospora caninum
Liverpool]
gi|325117263|emb|CBZ52815.1| putative structure specific recognition protein I [Neospora caninum
Liverpool]
Length = 538
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 241/423 (56%), Gaps = 21/423 (4%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGT--WALRIFL---KNGSLHRFA 75
G K++ +KN+KTG V Q D+ +W + G + LRI L KN + RF
Sbjct: 37 GLFKMSGDLFGWKNRKTGSVHQYKAADIVRASW-VMTGADAYQLRILLGPHKNDLMVRFD 95
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
GF E + F+T+FK+ + + RGW+WG K GN L ++ AF+I ++
Sbjct: 96 GFHEKNFADLSRHFETHFKVKLQRALQAHRGWHWGDVKMEGNNLQLTLDGCPAFDIHAQE 155
Query: 136 VSQCTT-GKNEVTVEFHPND---EAAESLIEMRFYIPTNEIAGDTD---PVEAFKDSVMN 188
++Q TT KN++ +E +D + + L+E+RFY P AGD D P++ K ++
Sbjct: 156 IAQVTTPSKNDLAIELIQDDTRDQQEDQLLEVRFYQP---FAGDDDAEGPLQQLKQKLVK 212
Query: 189 QASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPH 248
++ V D++A+ N++ L PRGRY+I I + HGK++DY I +++ RMF +P
Sbjct: 213 KSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHGKSYDYTIQYTSINRMFLVPR 272
Query: 249 KDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELS 308
+ F++SL+ ++QGQT Y F+ + F+ + +E+ EL+++ L+K +
Sbjct: 273 PNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVEVNLEAAELQQR---GLEKLIE 329
Query: 309 GPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI 368
G T+ V+ ++ + +V + + VPG F+ + CSY+A +G++YPL R F+FI KP I
Sbjct: 330 GKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRAQSGHLYPLNRSFLFIVKPVI 389
Query: 369 HIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
+R++++ +V F+R+G ST R F F + ++ G F+SI++ EY L DF+ EK +R+
Sbjct: 390 FVRYDDVVSVEFSRTGASTTNRFFAFTVSVRGGGEFEFTSIDRNEYKPLVDFLVEKGIRI 449
Query: 427 KNT 429
KN
Sbjct: 450 KNM 452
>gi|378733511|gb|EHY59970.1| FACT complex subunit pob3 [Exophiala dermatitidis NIH/UT8656]
Length = 569
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 277/540 (51%), Gaps = 64/540 (11%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG+ ++ + + +K G+ ++ + W + + ++I ++ + + GF+E
Sbjct: 15 PGRCRLAETALGWKPSGGGEPFTLDSNQISAAQWSRASKGFEIKIITRDAGVIQLDGFEE 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D+ FK + I++ KE ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 75 EDYDRAAKAFKIWYGINLEHKEHALRGWNWGKAEFGRAELAFNVQNRPAFEIPYTEISNT 134
Query: 140 T-TGKNEVTVEFHPNDEAAES-----------------------LIEMRFYIPTN----E 171
GKNE+ VEF+ + ++ ++ L+EMRFYIP E
Sbjct: 135 NLAGKNEIAVEFNLDADSTQNGTNGHKEGSTKNRGRKAAAGRDELVEMRFYIPGTVSKKE 194
Query: 172 IAGD------------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
+ G+ + F +++M++A + G A F +I LTPRGR+DI +
Sbjct: 195 VNGEEGSGADEDDEEEQNAANLFYETLMDKAEIGEVAGATFATFQDILHLTPRGRFDIDM 254
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ + F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY F+ +
Sbjct: 255 YENSFRLRGKTYDYKIQYQSIKKFFILPKNDEMHTMITLGLDPPLRQGQTRYPFIVMQLK 314
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTG 338
D+ ++L +E+ L+ KY+ KL+ P + V+AK+ K + +KI +P F H
Sbjct: 315 LDDEVNLDLNMTEELLETKYKDKLEPHYEAPIHHVIAKVFKGLSGKKIIMPSKDFVSHHN 374
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
+ V CS KA G ++ L++ FIF+ KP ++ + I ++ +R GG ++R+FD +
Sbjct: 375 MNGVKCSIKANEGLLFCLDKSFIFVPKPATYVPIDSIQSITMSRVGGALAASRTFDITMT 434
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEK 448
LK+G H FS+I +EE L F + K +R KN + +D SSD++
Sbjct: 435 LKNGQGEHQFSNINREEQQPLEAFFQAKGIRFKNEMLDDSSTLLKAALEDQDLASSDEDD 494
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDA 508
A R +A+ DDE +++ +++ +ESDVAEEYDS + SD SDA
Sbjct: 495 NGGA-----NRGSADEDDESPDEDFQAS--------SESDVAEEYDSAHESSGSDAGSDA 541
>gi|322711860|gb|EFZ03433.1| FACT complex subunit pob3 [Metarhizium anisopliae ARSEF 23]
Length = 605
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 255/529 (48%), Gaps = 73/529 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W + + +RI +N + + GF++
Sbjct: 57 GKCRFAETGFGWKPSNGGDTFTLDQTNIGGAQWSRAAKGYEIRILQRNSGIIQLDGFQQE 116
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ D++ FK + + KE ++RGWNWG +F L+F V N AFE+P ++
Sbjct: 117 DYDRLSKVFKNWYSTVLENKEHALRGWNWGKAEFAKAELTFSVQNKPAFELPYSEIGNTN 176
Query: 140 TTGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNEIA---- 173
G+NEV VE P D + L+EMRFYIP A
Sbjct: 177 LAGRNEVAVEMSLPQDSNDTGTNGQLGGARGKGKKAGGGRDQLVEMRFYIPGTTTAKKEA 236
Query: 174 ----------GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
+ + F D+++ +A + GD IA F ++ LTPRGR+DI ++ +
Sbjct: 237 DGDDAEEEEAEEKNAATLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEAS 296
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
F+L GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F +DE
Sbjct: 297 FRLRGKTYDYKIQYEAIKKFMVLPKPDEMHCMLCIGLDPPLRQGQTRYPFVVMQFKKDEE 356
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAV 342
++L E EL+ KY+ KL+ P + V+AKI + + N+KI+ P F H +
Sbjct: 357 VTIDLNLEESELQSKYKDKLEPHYEEPLHHVVAKIFRGLANKKISSPAKDFITHRSQYGI 416
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSG 399
CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R GG+ +FD + +K+G
Sbjct: 417 KCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVGGAVSTLSTFDITVVMKNG 476
Query: 400 VLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVK 458
+ FS+I +E+ L F + K LRVKN E + DA +
Sbjct: 477 AGSSQFSNINREDLKALETFFKLKGLRVKN------------------EIDEDANMLAAA 518
Query: 459 REAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDS 495
+ DD DDE D DF D ++SDVAEEYDS
Sbjct: 519 LREQDMDDSDDEVVANKADRGSADEDEESVDEDFQAD-SDSDVAEEYDS 566
>gi|392591558|gb|EIW80885.1| SSrecog-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 621
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 240/437 (54%), Gaps = 32/437 (7%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK +I + +K ++ +V I D+ + W ++ + LRI LK+ S F GF
Sbjct: 17 GKFRIAASGMAWKGEENEQVHAIPSGDIKWAQWYRVARNFQLRIGLKDRSREVFDGFVRE 76
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ DK+ K +F + + K+++ +GWNWG T G L+F V+N T+FE+PL V+
Sbjct: 77 DHDKMAGLLKQHFGVTLEVKDVTFKGWNWGVTDIQGQDLAFLVSNKTSFELPLGQVANSN 136
Query: 140 TTGKNEVTVEFHPND-------EAAESLIEMRFYIP--TNEIAGD--------------T 176
G+ EV++EF + A + ++E+RF++P + + G
Sbjct: 137 IAGRTEVSLEFTSSSNHGKKSRNAPDEMVEIRFHVPGTSTRVKGSDAGSDVEEEEEEEEM 196
Query: 177 DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIP 236
+ F +++ +A + GD + F+++ LTPRGRYD+ +F F +L GKT+DYKI
Sbjct: 197 SAAQVFHEAIKEKADIGQVMGDLVLSFDDVLILTPRGRYDLDMFLDFLRLRGKTYDYKIS 256
Query: 237 ISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
S++ R+F LP KD F++ L PI+QGQTRY +L + F ++E + EL +E+++
Sbjct: 257 YSSIARLFLLP-KDDLHVLFILGLANPIRQGQTRYSYLVMQFAREEETTAELNMAEEDI- 314
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPL 356
EKY+ +L K PT+EV++ + + + +KI GSF+ G + + KA G ++ L
Sbjct: 315 EKYD-RLKKHYEDPTFEVVSGVFRALSQKKIIGSGSFQSRAGLPGIKANLKAVQGDLFML 373
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLHTFSSIEKEE 411
E+ F+ K P I ++ F+R G S R+FD +I KSG +TF+SI KEE
Sbjct: 374 EKYIFFVSKQPTLIELADVHQCVFSRVGASMGATAARTFDLKIVTKSGPEYTFTSINKEE 433
Query: 412 YGKLFDFIREKKLRVKN 428
+ ++++KK+++KN
Sbjct: 434 HEPTEGYLKDKKIKIKN 450
>gi|400597070|gb|EJP64814.1| structure-specific recognition protein [Beauveria bassiana ARSEF
2860]
Length = 563
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 232/445 (52%), Gaps = 37/445 (8%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+ + + +K G ++ ++ W K+ + +RI +N + + GF++
Sbjct: 19 GRCRFAETGFGWKPNGGGDTFTLDHNNISSAQWSKVAKGYEVRILQRNSGIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D++ FK + + KE ++RGWNWG T+F L F+V N AFE+P ++
Sbjct: 79 DYDRLSKVFKNWYSTALESKEHALRGWNWGKTEFSKAELIFNVQNRPAFELPYAEIGNTN 138
Query: 141 -TGKNEVTVEFH----PNDEAA------------ESLIEMRFYIPTN---EIAGDT---- 176
G+NEV VE ND A + L+EMRFY+P E+ G+
Sbjct: 139 LAGRNEVAVEMSLPQDGNDTATANGKGKKAAAGRDQLVEMRFYVPGTSKKEVDGENGEGS 198
Query: 177 --------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
+ F +++M +A + GD IA F ++ LTPRGR+DI ++ + F+L G
Sbjct: 199 DQEQEPEKNAATLFYETLMEKAEIGEMAGDTIATFLDVLHLTPRGRFDIDMYEASFRLRG 258
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
KT+DYKI + + LP D I LDPP++QGQTRY F+ + F +DE ++L
Sbjct: 259 KTYDYKIQYDAIKKFMVLPKPDEMHCMLCIGLDPPLRQGQTRYPFVVMQFKKDEEVIIDL 318
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYK 347
E L+ KY+ KLD P + V+AKI + + N+KI+ P F H + CS K
Sbjct: 319 SLDEATLESKYKDKLDAHYEEPLHHVVAKIFRGLANKKISSPAKDFITHRSQYGIKCSIK 378
Query: 348 AAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHT- 403
A+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ +FD + +K G +
Sbjct: 379 ASEGFLYCLEKAFMFVPKPATYIAYEQTQSITFSRVGGAVSTLSTFDITVAMKGGAGSSQ 438
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKN 428
FS+I +E+ L F + K LRVKN
Sbjct: 439 FSNINREDLKALETFFKLKGLRVKN 463
>gi|451997479|gb|EMD89944.1| hypothetical protein COCHEDRAFT_1178087 [Cochliobolus
heterostrophus C5]
Length = 569
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 282/566 (49%), Gaps = 71/566 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK+
Sbjct: 22 PGATRFSDSGFGWK-PANGETYTCDQSQIIQAQWSRAARGYEVKILSRNDGIIQLDGFKQ 80
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FKT + I + +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 81 EDFDRVAKVFKTWYGISLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 140
Query: 140 T-TGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------- 169
GKNEV V+F P D A + L+EMRFYIP
Sbjct: 141 NLAGKNEVAVDFSLPADSDSGANGQLGGARFRGKKSAGARDQLVEMRFYIPGLASKKEKT 200
Query: 170 --------NEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTP-RGRYDIKIF 220
E +T+ F +++M +A + GD A F +I LTP RGR+DI ++
Sbjct: 201 EDGEDASGAEDGEETNAANLFYETLMEKAEIGEVAGDTFATFLDILHLTPSRGRFDIDMY 260
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F +
Sbjct: 261 ESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFKR 320
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGT 339
DE ++L L++KY+ KL P V+A I + + ++IT P F H
Sbjct: 321 DEEVNLDLNMKGDLLEDKYKDKLQSHYEAPIATVVADIFRGLSGKRITRPSRDFISHHEQ 380
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIEL 396
S V CS KA G+++ L++ F+FI KP +I + I +V +R GG ++R+FD +
Sbjct: 381 SGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIQSVTMSRVGGAMAASRTFDITFTM 440
Query: 397 KSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEKE 449
K+G+ H FS+I +EE L +F R K ++ KN +G + ED SSDD
Sbjct: 441 KNGMAEHQFSNINREEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDG-- 498
Query: 450 PDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDAS 509
A R +A+ +DES DEDF D +ES+V EE+DS+ + SD D++
Sbjct: 499 -----APANRGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDAEMD 545
Query: 510 EGTKKKKKEKSRKTITISEKPRKSKK 535
+ + ++ + E+P+K +K
Sbjct: 546 DAESEGDAAEA-----VPERPKKKQK 566
>gi|323347068|gb|EGA81343.1| Pob3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 474
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 243/453 (53%), Gaps = 50/453 (11%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K +G Q P +L V W + + L+I KN +
Sbjct: 17 GRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGCRGYDLKINTKNQGVI 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + + I + F F I V ++E S+RGWNWG T N + F +N FEIP
Sbjct: 77 QLDGFSQDDXNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP-----------------TN 170
++ T KNEV +EF+ DE A + L+EMRFYIP +N
Sbjct: 137 YARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQTNVDENMTKKEESSN 196
Query: 171 EIAG----------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
E+ + EAF + + +A + GDAI F ++ TPRGR
Sbjct: 197 EVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGR 256
Query: 215 YDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFL 274
YDI I+ + +L GKT++YK+ + R+ +LP D + V++++PP++QGQT Y FL
Sbjct: 257 YDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPPLRQGQTTYPFL 316
Query: 275 TLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFR 334
L F +DE +E++L +++ +E Y+ KL K+ T+ V++ ++K + +R++ VPG ++
Sbjct: 317 VLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYK 376
Query: 335 GHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFD 391
AV+CS+KA GY+YPL+ F F+ KP ++I F +++ VN +R+G S+R+FD
Sbjct: 377 SKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFD 436
Query: 392 FEIELKSGV-LHTFSSIEKEEYGKLFDFIREKK 423
E+ L+S TF++I KEE L F++ KK
Sbjct: 437 LEVVLRSNRGSTTFANISKEEQQLLEQFLKSKK 469
>gi|389744857|gb|EIM86039.1| SSrecog-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 645
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 285/546 (52%), Gaps = 77/546 (14%)
Query: 14 FRGALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSL 71
F G L P GK ++ + ++ +++ V I D+ + W ++ + LR+ LK+
Sbjct: 9 FHG-LSPLVGKFRVAASGMAWRAEESDAVIAIASKDIKWAQWLRVARGFQLRVGLKDRRK 67
Query: 72 HRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEI 131
F GF + DK+ S K +F + + ++E+ +GWNWG T F G L+F V+N TAFE+
Sbjct: 68 ETFDGFGREDHDKVASLLKQHFGVTLEQQEVLFKGWNWGITDFRGEDLAFLVSNKTAFEL 127
Query: 132 PLRDVSQC-TTGKNEVTVEF-----------HPNDEAAESLIEMRFYIP--------TNE 171
L+ V+ G+ EV++EF P+ A + ++E+RF++P T
Sbjct: 128 QLQHVANSNIAGRTEVSLEFASSAGEASSSKKPSKSAPDEMVEIRFFVPGTTSTRQRTGS 187
Query: 172 IAG------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
AG + + F D++ +A ATG+ I F E+ LTPRGRYD+ +
Sbjct: 188 DAGSQKSDAEDEDGEEVSAAQVFHDAIKEKAGSELATGEKILSFEEVLVLTPRGRYDVDM 247
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
F F +L GKT+DYKI +++ ++F LP KD F++SL PI+QGQTRY +L + F+
Sbjct: 248 FPDFLRLRGKTYDYKIVYTSISKLFLLP-KDDLHVLFILSLLTPIRQGQTRYQYLVMQFS 306
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
++E EL +++E+ + +L K+ PT+EV++ + + + +KIT GSF+ TG
Sbjct: 307 REEEITAELNMTDEEIAK--HDRLKKDYEDPTFEVVSSVFRALSGKKITSTGSFQSRTGH 364
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR------SGGSTRSFDFE 393
+ + KA G ++ LE+ F+ K P+ + ++ F+R + R+FD +
Sbjct: 365 PGIKANLKAVQGDLFLLEKSIFFVSKQPVLVELSDVHQAVFSRVGGAGLGASAARTFDLK 424
Query: 394 IELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
I KSG +TF+S+ KEE+ + F++EKK+RVKN E PD
Sbjct: 425 IVTKSGPEYTFTSLNKEEHEPVDAFLKEKKVRVKN------------------EMMPDGD 466
Query: 454 LARVKREAAERDDEDDEDEDESTDEDFNPD-------QAESDVAEEYDSNPT----PTDS 502
L A DD D+E + ++DE P+ ++S+ E+++++ T PTD+
Sbjct: 467 LLM----AGADDDSDEEMQSVASDEREQPNVRRTGDDDSDSEDDEDFEASSTDAGSPTDT 522
Query: 503 DEDSDA 508
D DSD
Sbjct: 523 DSDSDG 528
>gi|302656953|ref|XP_003020211.1| hypothetical protein TRV_05716 [Trichophyton verrucosum HKI 0517]
gi|291184020|gb|EFE39593.1| hypothetical protein TRV_05716 [Trichophyton verrucosum HKI 0517]
Length = 636
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 282/559 (50%), Gaps = 68/559 (12%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE- 79
GK K+ + + +K G ++ ++ W + + L+IF + + + GF++
Sbjct: 89 GKCKLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIFSRTCGVIQLDGFEQD 148
Query: 80 ----TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
+ D+ FK + +++ +E ++RGWNWG +F LSF+V N AFE+P +
Sbjct: 149 KAAPQDFDRASKAFKIWYGVNLTNREHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSE 208
Query: 136 VSQCT-TGKNEVTVEFH-PNDEAAES---------------------LIEMRFYIP---- 168
+S G+NEV VEF P D+A+ + L+EMRFYIP
Sbjct: 209 ISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGLGKDELVEMRFYIPGTVP 268
Query: 169 ------------TNEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLT 210
N+ A + VE F +++M++A + + GD A F ++ LT
Sbjct: 269 KKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLT 328
Query: 211 PRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTR 270
PRGR+D+ ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTR
Sbjct: 329 PRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTR 388
Query: 271 YHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVP 330
Y FL + D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P
Sbjct: 389 YPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVIMP 448
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---ST 387
S V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++
Sbjct: 449 ----SRDFASGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSAS 504
Query: 388 RSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDD 446
R+FD + LK G H FS+I +EE L DF + K +R KN E
Sbjct: 505 RTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVEEASTLIA------T 558
Query: 447 EKEPDAYLARVKREAAERDDEDDEDED-ESTDEDFNPDQAESDVAEEYDSNPTPT--DSD 503
E D + +A ++D ED ES DEDF D ++S+VAEE+DS + DSD
Sbjct: 559 ALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGD-SDSEVAEEFDSEHASSSGDSD 617
Query: 504 EDSDASEGTKKKKKEKSRK 522
+ D E + KKK K +K
Sbjct: 618 AEMDDVEEERPKKKTKVQK 636
>gi|405124330|gb|AFR99092.1| chromatin binding protein [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 236/443 (53%), Gaps = 39/443 (8%)
Query: 44 NGPDLDFVNWQKLVGTWALRIFLKNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKE 101
NG D+ W ++ + LR+ ++N R F GFK ++DKI + F I + ++
Sbjct: 43 NGSDIRHATWFRVARHFQLRLGMRNSEKPRISFDGFKRDDLDKIKRTLQEYFNITLETRD 102
Query: 102 LSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP-------- 152
S++GWNWG + G+ L F V TAF++PL V+ GK EV +EF+P
Sbjct: 103 TSLKGWNWGEAQVKGSDLVFQVQGKTAFDVPLSQVANSNIAGKYEVALEFNPPSNYKFDP 162
Query: 153 ---NDEAAESLIEMRFYIP-------------------TNEIAGDTDPVEAFKDSVMNQA 190
N + ++EMRFYIP +E + +AF + +A
Sbjct: 163 KDLNKRPPDEMVEMRFYIPGKSTKKAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKA 222
Query: 191 SVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKD 250
+ GD+I VF + LTPRGR+ I+++ +L GK+ D+++P +++ R+F LP D
Sbjct: 223 DIGAVVGDSIVVFEDCLILTPRGRFSIEVYADSIRLVGKSTDHRVPFTSIHRIFLLPKLD 282
Query: 251 GRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGP 310
V+ LDPPI+QG TRY FL + +DE EL +++EL + + L+K
Sbjct: 283 DLHVQLVLGLDPPIRQGATRYPFLVAQWPKDEVVNAELNLTDEELAQYPD--LEKTYEAT 340
Query: 311 TYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHI 370
T++V+++++K + +K+T PGS R G + + + KA G +Y LE+G IFI K PI I
Sbjct: 341 TFQVVSRVLKALTGKKVTPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILI 400
Query: 371 RFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRV 426
F + +++F+R GG S R+FD + K+G H FS+I K+E G + F++ K +R+
Sbjct: 401 DFSKTDSISFSRVGGGVASARTFDMRVVSKTGGADHVFSAINKQEVGPISSFLQSKNIRL 460
Query: 427 KNTGKGEKPNYKEDFGSSDDEKE 449
KN + + E F D+E E
Sbjct: 461 KNEMEEAIVDIDEPFSDDDEEME 483
>gi|325184576|emb|CCA19069.1| FACT complex subunit SSRP1 putative [Albugo laibachii Nc14]
Length = 620
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 237/415 (57%), Gaps = 44/415 (10%)
Query: 62 LRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSF 121
L+++ K G RF K +IDK+ + F + + +++ G NWG KF G L+F
Sbjct: 116 LKVYQKGGKYVRFTNLKFKDIDKLKEHVEKYFDRALEQDKVASLGGNWGQMKFEGPNLTF 175
Query: 122 -DVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGDT 176
DV + + EIPL +SQC GKNEV ++FH +D A E+L+EMR Y+P + G +
Sbjct: 176 QDVKSASILEIPLESISQCALPGKNEVELQFHEDDTVAGDEETLVEMRLYLPPSGTIGSS 235
Query: 177 --------DPV-------------EAFKDSVMNQASVINATGDAIAVFNEI--QCLTPRG 213
+P EAF+D V+++A++ N TG +I +E LTPRG
Sbjct: 236 MQDEDEAENPARKDSSQSEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGTFLTPRG 295
Query: 214 RYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHF 273
RY ++I+ SF ++HGKTFDYKI S + R F L +G FVISL+ PI+QG+ Y
Sbjct: 296 RYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAFVISLEEPIRQGKQGYPH 355
Query: 274 LTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSF 333
L L ++++ +++ S QE+ +KY G + + +SG +++A I K ++ +K+ G F
Sbjct: 356 LVLQLSKEDV-HIDVNLSTQEI-QKYNGNIHERMSGALPQIVATIFKFVIGKKVYTSGKF 413
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STR 388
+ H+G A+ C+ KA +G ++PLE+ F+FIHKP IR+EEI V F R G ++R
Sbjct: 414 KTHSGDRALKCAVKAQSGVLFPLEKSFMFIHKPTTFIRYEEIEFVEFQRYAGQAGSTASR 473
Query: 389 SFDFEIELKSG-------VLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPN 436
+FD + KS +L FS+I++ E+ +L F+ KKLR++N + +PN
Sbjct: 474 NFDLLVSCKSVGSEPAREIL--FSAIDRREFPELSQFLSSKKLRIRNLKETTQPN 526
>gi|58270624|ref|XP_572468.1| chromatin binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118116|ref|XP_772439.1| hypothetical protein CNBL3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819209|sp|P0CR75.1|POB3_CRYNB RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|338819210|sp|P0CR74.1|POB3_CRYNJ RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|50255052|gb|EAL17792.1| hypothetical protein CNBL3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228726|gb|AAW45161.1| chromatin binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 588
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 236/443 (53%), Gaps = 39/443 (8%)
Query: 44 NGPDLDFVNWQKLVGTWALRIFLKNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKE 101
NG D+ W ++ + LR+ ++N R F GFK ++DKI + F I + ++
Sbjct: 43 NGSDIRHATWFRVARHFQLRLGMRNSEKPRISFDGFKRDDLDKIKRTLQEYFNITLETRD 102
Query: 102 LSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP-------- 152
S++GWNWG + G+ L F V TAF++PL V+ GK EV +EF+P
Sbjct: 103 TSLKGWNWGEAQVKGSDLVFQVQGKTAFDVPLSQVANSNIAGKYEVALEFNPPSNYKFDP 162
Query: 153 ---NDEAAESLIEMRFYIP-------------------TNEIAGDTDPVEAFKDSVMNQA 190
N + ++EMRFYIP +E + +AF + +A
Sbjct: 163 KDLNKRPPDEMVEMRFYIPGKSMKKAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKA 222
Query: 191 SVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKD 250
+ GD+I VF + LTPRGR+ I+++ +L GK+ D+++P +++ R+F LP D
Sbjct: 223 DIGAVVGDSIVVFEDCLILTPRGRFSIEVYADSIRLVGKSTDHRVPFTSIHRIFLLPKLD 282
Query: 251 GRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGP 310
V+ LDPPI+QG TRY FL + +DE EL +++EL + + L+K
Sbjct: 283 DLHVQLVLGLDPPIRQGATRYPFLVAQWPKDEVVNAELNLTDEELAQYPD--LEKTYEAT 340
Query: 311 TYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHI 370
T++V+++++K + +K+T PGS R G + + + KA G +Y LE+G IFI K PI I
Sbjct: 341 TFQVVSRVLKALTGKKVTPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILI 400
Query: 371 RFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRV 426
F + +++F+R GG S R+FD + K+G H FS+I K+E G + F++ K +R+
Sbjct: 401 DFSKTDSISFSRVGGGVASARTFDMRVVSKTGGADHVFSAINKQEVGPISSFLQSKNIRL 460
Query: 427 KNTGKGEKPNYKEDFGSSDDEKE 449
KN + + E F D+E E
Sbjct: 461 KNEMEEAIVDIDEPFSDDDEEME 483
>gi|258576315|ref|XP_002542339.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902605|gb|EEP77006.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 569
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 266/526 (50%), Gaps = 64/526 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G ++ ++ W + + L+I + G + + GF++
Sbjct: 27 PGKCKLAESGLGWKPSGGGDTFTLDKSNVGAAQWSRAAKGYELKILPRTGGVIQLDGFQQ 86
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++ FK + +++ +E ++RGWNWG F LSF+V N AFEIP ++S
Sbjct: 87 EDFERSSKAFKLWYGVNLENREHALRGWNWGKADFGKAELSFNVQNRPAFEIPYSEISNT 146
Query: 140 T-TGKNEVTVEFH---------PNDEAAES-------------LIEMRFYIPTNEIAGDT 176
G+NEV VEF PN + + L+EMRFYIP + D
Sbjct: 147 NLAGRNEVAVEFSLPADGTPNGPNGQPGSNKNRGKKAGAGKDELVEMRFYIPGTAVKKDQ 206
Query: 177 ----------------DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
+ F +++M++A + GD A F +I LTPRGR+DI ++
Sbjct: 207 ADADEKSVDGEEIEEQNAANLFYETLMDKAEIGEVAGDTFATFPDILHLTPRGRFDIDMY 266
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+ +L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 267 ENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITVGLDPPLRQGQTRYPFLVMQLKL 326
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGT 339
D+ ++L +++ L+ +Y+ KL P + VM K+ + + +KI +P + F +
Sbjct: 327 DDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHLVMTKVFRGLSGKKIIMPSNDFTSNHNH 386
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIEL 396
+ + CS KA G +Y L++ F+F+ KP +++ + I+ + +R GG ++R+FD + L
Sbjct: 387 NGIKCSIKANEGLLYCLDKSFMFVPKPATYVQIDNISVITMSRVGGAVSASRTFDITMSL 446
Query: 397 KSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN-------TGKGEKPNYKEDFGSSDDEKE 449
K G H FS+I +EE L F + K +R KN T + E SSD+E
Sbjct: 447 KGGGEHQFSNINREEQKPLEAFFKAKNIRFKNEMAEDTSTLLAAALDNDELMESSDEE-- 504
Query: 450 PDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
++ R +A+ D+E +++ ++ ++ESDVAEEYDS
Sbjct: 505 ----VSGAHRGSADEDEESVDEDFQA--------ESESDVAEEYDS 538
>gi|322695431|gb|EFY87239.1| FACT complex subunit pob3 [Metarhizium acridum CQMa 102]
Length = 605
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 255/529 (48%), Gaps = 73/529 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W + + +RI +N + + GF++
Sbjct: 56 GKCRFAETGFGWKPSNGGDTFTLDQTNIGGAQWSRAAKGYEVRILQRNSGIIQLDGFQQE 115
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ D++ FK + + KE ++RGWNWG +F L F V N AFE+P ++
Sbjct: 116 DYDRLSKVFKNWYSTVLENKEHALRGWNWGKAEFAKAELIFSVQNKPAFELPYSEIGNTN 175
Query: 140 TTGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTNEIA---- 173
G+NEV VE P D + L+EMRFYIP A
Sbjct: 176 LAGRNEVAVEMSLPQDSNDTGTNGQLGGARGKGKKAGGGRDQLVEMRFYIPGTTTAKKEA 235
Query: 174 ----------GDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
+ + F D+++ +A + GD IA F ++ LTPRGR+DI ++ +
Sbjct: 236 DGDDAEDEEAEEKNAATLFYDTLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEAS 295
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
F+L GKT+DYKI ++ + LP D I LDPP++QGQTRY F+ + F +DE
Sbjct: 296 FRLRGKTYDYKIQYESIKKFMVLPKPDEMHCMLCIGLDPPLRQGQTRYPFVVMQFKKDEE 355
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAV 342
++L E EL+ KY+ KL+ P + V+AKI + + N+KI+ P F H +
Sbjct: 356 VTIDLNLDESELQSKYKDKLEPHYEEPLHHVVAKIFRGLANKKISSPAKDFITHRSQYGI 415
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSG 399
CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R GG+ +FD + +K+G
Sbjct: 416 KCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVGGAVSTLSTFDITVVMKNG 475
Query: 400 VLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVK 458
+ FS+I +E+ L F + K LRVKN E + DA +
Sbjct: 476 AGSSQFSNINREDLKALETFFKLKGLRVKN------------------EIDEDANMLAAA 517
Query: 459 REAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDS 495
+ DD DDE D DF D ++SDVAEEYDS
Sbjct: 518 LREQDMDDSDDEVVANKADRGSADEDEESVDEDFQAD-SDSDVAEEYDS 565
>gi|302511187|ref|XP_003017545.1| hypothetical protein ARB_04427 [Arthroderma benhamiae CBS 112371]
gi|291181116|gb|EFE36900.1| hypothetical protein ARB_04427 [Arthroderma benhamiae CBS 112371]
Length = 611
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 281/559 (50%), Gaps = 68/559 (12%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + +K G ++ ++ W + + L+I + + + GF++
Sbjct: 64 GKCKLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIVSRTCGVIQLDGFEQD 123
Query: 81 E-----IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
E D+ FK + +++ +E ++RGWNWG +F LSF+V N AFE+P +
Sbjct: 124 EAAPQDFDRASKAFKIWYGVNLTNREHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSE 183
Query: 136 VSQCT-TGKNEVTVEFH-PNDEAAES---------------------LIEMRFYIP---- 168
+S G+NEV VEF P D+A+ + L+EMRFYIP
Sbjct: 184 ISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGLGRDELVEMRFYIPGTVP 243
Query: 169 ------------TNEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLT 210
N+ A + VE F +++M++A + + GD A F ++ LT
Sbjct: 244 KKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLT 303
Query: 211 PRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTR 270
PRGR+D+ ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTR
Sbjct: 304 PRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTR 363
Query: 271 YHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVP 330
Y FL + D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P
Sbjct: 364 YPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVIMP 423
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---ST 387
S V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++
Sbjct: 424 ----SRDFASGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSAS 479
Query: 388 RSFDFEIELKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDD 446
R+FD + LK G H FS+I +EE L DF + K +R KN E
Sbjct: 480 RTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVEEASTLIA------T 533
Query: 447 EKEPDAYLARVKREAAERDDEDDEDED-ESTDEDFNPDQAESDVAEEYDSNPTPT--DSD 503
E D + +A ++D ED ES DEDF D ++S+VAEE+DS + DSD
Sbjct: 534 ALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGD-SDSEVAEEFDSEHASSSGDSD 592
Query: 504 EDSDASEGTKKKKKEKSRK 522
+ D E + KKK K +K
Sbjct: 593 AEMDDVEEERPKKKTKVQK 611
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 330/641 (51%), Gaps = 43/641 (6%)
Query: 7 FQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIF- 65
F +S RG G LK++ I +K G+ +I +++ + + + G L I
Sbjct: 7 FGSISLIGRGVPIQGALKMSAAGISWKKAGGGRSVEIAPSEIEEIAYTPVPGGVVLTIRR 66
Query: 66 LKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNN 125
+ R GF+ +++ + + + ++E G NWG + L+F V+
Sbjct: 67 AGDKEAVRLRGFRASDLAGVKELVAECYAKKLTKREAQTNGRNWGEVDVDRSSLTFTVDG 126
Query: 126 TTAFEIPLRDVSQCTTG-KNEVTVEFHPNDEAAES----LIEMRFYIP-TNEIAGDTDPV 179
T+FE+ +D++ K+EV +EFH +D ++ L+EM FY+P T+ G +
Sbjct: 127 KTSFEVNAKDIASVNLATKHEVVMEFHMDDTVHQASKDALVEMSFYVPPTSSKWGVDQSI 186
Query: 180 E--------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
E D ++ A V + G+AIA F + + PRG+ DI++ + +L G
Sbjct: 187 EDNEDTGAKNLMDKLLTVADVDDDAGEAIAEFEGVSLVAPRGKVDIEVHATHVRLLGSAA 246
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S V R+F LP +G Q F +I LDPPI++GQT Y + FN +E E+E +
Sbjct: 247 DFKIQYSAVQRVFLLPKPNGHQTFGIIHLDPPIRKGQTFYPHIVATFNANEELEIEPALT 306
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
E++ + K+E KL+++ GP+ EV +++K + K+T G+F G SAV S KA G
Sbjct: 307 EEQ-RGKFE-KLEEKYDGPSGEVFVRLLKAVAGCKLTRQGTFASPGGGSAVKASNKAEVG 364
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFAR-SG----GSTRSFDFEIELKS---GVLHT 403
++P+E+ F ++ KPP+ + + ++ ++ F R SG G+ R+FD + +K+ G H
Sbjct: 365 LLFPMEKSFFYLPKPPLLLHYADVDSIEFERHSGAGAVGAQRTFDILVSMKTAAGGAQHQ 424
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAE 463
F I K+E+ L +F+ K+L++ N + + DDE+E D + AR++
Sbjct: 425 FHGIPKQEFQNLVNFLTAKQLKIVNVDAQARVDQ-----IIDDEEEEDHHAARLRAGG-- 477
Query: 464 RDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKT 523
ED TDEDF ++SD E D + + D D D + KK+K++K+
Sbjct: 478 --------EDSGTDEDFAAG-SDSDGGEPTDESGSDDDDDSDGGGDSDSDAPKKKKAKKS 528
Query: 524 ITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTE 583
K K K K+ KKD NAPK+P+S+YM++ + R K+ ++ PG+S E
Sbjct: 529 PAKKAKAAAKGKGKGGK--KGKKAKKDPNAPKRPLSSYMIFAGENRGKLVEETPGMSIGE 586
Query: 584 IAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
I K G WK ++++EK Y++K +AK Y LK Y+ +
Sbjct: 587 IGKALGAKWKEMTAEEKVPYEDKAKEAKAAYAVKLKEYEAT 627
>gi|46111273|ref|XP_382694.1| hypothetical protein FG02518.1 [Gibberella zeae PH-1]
gi|110287791|sp|Q4IJU0.1|POB3_GIBZE RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
Length = 569
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 268/516 (51%), Gaps = 50/516 (9%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS-LHRFAGFKE 79
GK + + +K G ++ ++ W + + ++I ++ S + + GF++
Sbjct: 19 GKCRFAETGFGWKPVGGGDTFTLDHNNIASAQWSRAAKGYEIKIVQRSKSGIIQLDGFQQ 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FK + + KE ++RGWNWG +F + L+F V N AFE+P ++
Sbjct: 79 EDYDRLAKVFKNWYSTVLESKEHALRGWNWGKAEFSKSELTFSVQNRPAFELPYSEIGNT 138
Query: 140 T-TGKNEVTVEFHPNDEAAES------------------LIEMRFYIPT--------NEI 172
G+NEV VE + A + L+EMRFYIP E
Sbjct: 139 NLAGRNEVAVEMALPESGANAQLGGARSKGSKAAAGRDQLVEMRFYIPGVTTRKEAEGED 198
Query: 173 AG--------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
AG + + F ++++++A + GD IA F ++ LTPRGR+DI ++ + F
Sbjct: 199 AGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEASF 258
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT+DYKI + + LP D V+ LDPP++QGQTRY F+ + F +DE
Sbjct: 259 RLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDPPLRQGQTRYPFVVMQFKKDEEV 318
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVT 343
++L +E+ELK KY+ KL+ P ++V+AKI + + NRKI+ P F H +
Sbjct: 319 TIDLNLNEEELKSKYQDKLEPHYEEPLHQVVAKIFRGLGNRKISSPAKDFITHRNQYGIK 378
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGV 400
CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R G+ + FD + LK+G
Sbjct: 379 CSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVSGAVSALSTFDITVLLKNGA 438
Query: 401 LHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKR 459
+ FS+I +E+ L F + K LRVKN + D+ E +
Sbjct: 439 GSSQFSNISREDLKALESFFKLKGLRVKNEIDEDANLLAAAMNQQMDDSEDEV------- 491
Query: 460 EAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
AA+ D ++++ES DEDF D +ESDVAEEYDS
Sbjct: 492 -AAKADRGSADEDEESVDEDFRTD-SESDVAEEYDS 525
>gi|407925324|gb|EKG18337.1| Structure-specific recognition protein [Macrophomina phaseolina
MS6]
Length = 1346
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 250/483 (51%), Gaps = 54/483 (11%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG+ + + + +K G+ ++ ++ W + + LR+F KN + + GF++
Sbjct: 40 PGRCRFAEGGLGWKPSAGGETFTLDSSNITQAQWSRASRGYELRVFTKNTGIIQLDGFQQ 99
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ +++ FK + I++ KE ++RG+NWG +F + LSF+V + AFE+P +++
Sbjct: 100 EDFERLAKVFKMWYSINLENKEHALRGYNWGKAEFGKSELSFNVQSRPAFELPYSEIANT 159
Query: 140 T-TGKNEVTVEFH--PNDE--------------------AAESLIEMRFYIPTNEIAG-- 174
GKNEV +EF N E A + L+EMRFYIP
Sbjct: 160 NLAGKNEVAIEFSLPANGEDTGTNGHLGGARARGKKSGGARDQLVEMRFYIPGTVTKKEK 219
Query: 175 ------------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
+ + F ++++ +A + GD F +I LTPRGR+
Sbjct: 220 KEEGEGEGEDVSDEGEEEEHNAASLFYNTLIEKAEIGEIAGDTFITFEDILHLTPRGRFG 279
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
+ ++ + F+L GKT+DYKI + + F LP D I +DPP++QGQTRY F+ +
Sbjct: 280 LDMYETSFRLRGKTYDYKIQYDQIKKFFVLPKPDDIHQLITIGVDPPLRQGQTRYPFIVM 339
Query: 277 LFNQDETSEMELPFSEQE--LKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-F 333
F +DE + +P + + L+EKY+GKL+ + GP Y V+A++++ + RK P F
Sbjct: 340 QFKKDEELDEPVPLNIEPDVLEEKYKGKLEAQYEGPIYRVVAQLLRGLSGRKTIAPSRDF 399
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSF 390
H S + CS KA G++Y +++ F+F+ KP +I F++I+ + +R GG S+R+F
Sbjct: 400 ISHHQQSGIKCSIKANEGHLYCMDKSFLFVPKPATYISFDQISVITMSRVGGNLSSSRTF 459
Query: 391 DFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSD 445
D I +K+G H FS+I +EE L +F + K L+ KN +G +D S+
Sbjct: 460 DITIRMKNGSDHQFSNINREEQTPLEEFFKIKNLKTKNEMVDDSGALLAAALNDDLDESE 519
Query: 446 DEK 448
DE+
Sbjct: 520 DEQ 522
>gi|299743222|ref|XP_001835614.2| chromatin binding protein [Coprinopsis cinerea okayama7#130]
gi|298405558|gb|EAU86185.2| chromatin binding protein [Coprinopsis cinerea okayama7#130]
Length = 643
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/446 (33%), Positives = 237/446 (53%), Gaps = 46/446 (10%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRF 74
L P GK ++ + +K +T V + G + + W ++ + LR+ L + + +F
Sbjct: 11 GLSPEVGKFRVAATGMGWKGSETNTVVTLEGSRIKWAQWLRVARNFQLRVGLSDHTRQKF 70
Query: 75 AGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLR 134
GF E DK+ S K +F I + +E+S RGWNWG F G L+F V + TAFE+PL
Sbjct: 71 DGFLREEHDKLASLLKNHFGITLETQEVSFRGWNWGVADFRGEELAFLVQDKTAFELPLN 130
Query: 135 DVSQC-TTGKNEVTVEFH--------PNDEAAESLIEMRFYIPT---------------- 169
V+ G+ EV++EF P +A + ++E+RF++P
Sbjct: 131 QVANSNIAGRTEVSLEFASIAGSSKGPGKQAGDEMVEIRFHVPGAVPKVKGSDAGSQDGE 190
Query: 170 --NEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
NE + +AF +++ +A++ TG+ I F E+ LTPRGRYD+ +F F +L
Sbjct: 191 QDNEDEEEISAAQAFHETIKERANIGQITGNMILSFEEVLVLTPRGRYDMDMFRDFLRLR 250
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI +++ R+F LP KD + F+ GQTRY +L + F ++E E
Sbjct: 251 GKTYDYKIVFTSISRLFLLP-KDDQHVLFI---------GQTRYQYLVMQFTREEEITAE 300
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYK 347
L S+++L KY+ KL K PTYEV++ + + + +KI GSF+ G + + K
Sbjct: 301 LNISDEDLA-KYD-KLKKNYEDPTYEVISSVFRALSGKKIIGAGSFQSRDGHPGIKANLK 358
Query: 348 AAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS-----TRSFDFEIELKSGVLH 402
A G ++ LE+ F+ K P I +I V F+R G S R+FD +I KSG +
Sbjct: 359 AIQGDLFMLEKYIFFVSKAPTLIEISDIHQVVFSRVGASMGAAAARTFDLKIITKSGPEY 418
Query: 403 TFSSIEKEEYGKLFDFIREKKLRVKN 428
F+SI KEE+ ++++KK+RVKN
Sbjct: 419 NFTSINKEEHEVTEAYLKDKKVRVKN 444
>gi|340518432|gb|EGR48673.1| predicted protein [Trichoderma reesei QM6a]
Length = 574
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 260/531 (48%), Gaps = 75/531 (14%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W + + +RI +N + + GF+
Sbjct: 19 GKCRFAETGFGWKPAGGGDTFTLDHTNISSAQWSRAARGYEIRILQRNSGIIQLDGFQHE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ +++ FK + + KE ++RGWNWG +F + F+V N AFE+P ++
Sbjct: 79 DYERLSKIFKNWYSTALENKEHALRGWNWGKAEFSKAEIVFNVQNRPAFELPYSEIGNTN 138
Query: 141 -TGKNEVTVEF----HPNDEAA------------------ESLIEMRFYIPTN----EIA 173
G+NEV VE + ND + L+EMRFYIP E
Sbjct: 139 LAGRNEVAVELALPVNANDTGTNGQLGGARGKGKKAGAGKDQLVEMRFYIPGTTTKKETE 198
Query: 174 GD----------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
GD + F ++++ +A + GD IA F ++ LTPRGR+DI ++ +
Sbjct: 199 GDDAGSDGEEEEQNAATFFYETLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEAS 258
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
F+L GKT+DYKI V + LP D I LDPP++QGQTRY F+ + F +DE
Sbjct: 259 FRLRGKTYDYKIQYEAVKKFMVLPKPDDMHCLLCIGLDPPLRQGQTRYPFVVMQFKKDEE 318
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAV 342
++L E+EL+ KY+ KL+ P + V+AKI + + N+KI+ P F H +
Sbjct: 319 VTIDLNIDEEELQTKYKDKLEAHYEEPLHHVVAKIFRGLGNKKISSPAKDFLTHRNQYGI 378
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSG 399
CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R G+ + FD + +K+G
Sbjct: 379 KCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVSGAVSALSTFDITVVMKNG 438
Query: 400 VLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA-YLARV 457
+ FS+I +E+ L F + K LRVKN E + DA LA
Sbjct: 439 AGSSQFSNINREDLKALESFFKLKGLRVKN------------------EIDEDANLLAAA 480
Query: 458 KREAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDSN 496
RE A DD DDE D DF D ++SDVAEEYDSN
Sbjct: 481 LREEA-MDDSDDEVVVPKADRGSADEDEESVDEDFQAD-SDSDVAEEYDSN 529
>gi|328863949|gb|EGG13048.1| hypothetical protein MELLADRAFT_51330 [Melampsora larici-populina
98AG31]
Length = 529
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 247/482 (51%), Gaps = 58/482 (12%)
Query: 1 MTEAL-EFQEVSSEFRG-ALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVG 58
MT A+ +F+ + FRG PGKL+I + +K V + ++ +V W K+
Sbjct: 1 MTAAIADFENI---FRGLGPTPGKLRIAASGLGWKPVDANPVVTVPKDEIKWVQWIKVAR 57
Query: 59 TWALRIFL-------KNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNW 109
+ LRI L K G R F GF+ + DK+ + FK +F + + K++S+RGWNW
Sbjct: 58 GYQLRIGLNRDRSDIKIGDRRRTTFDGFRADDHDKLANLFKQHFHVTLETKDMSLRGWNW 117
Query: 110 GGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEF------------------H 151
G + L+F V AFE+PL V + K EV +EF +
Sbjct: 118 GKADVQASDLAFMVAGKPAFEVPLAFVHNASITKTEVALEFLDQAVLQPKADGLSGSIKN 177
Query: 152 PNDEAAESLIEMRFYIPTNEIAGDT----------------------DPVEAFKDSVMNQ 189
+ L+E+R Y+P N + + +A D VM++
Sbjct: 178 ARKTVTDQLVELRLYVPGNASSNNAAENGTNAGSDIDDTGDGDGDGMSAAQALHDMVMDK 237
Query: 190 ASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHK 249
A + G+ I F ++ C TPRGRYDI +++ F +L GKT+DYK+ S++LR+F LP
Sbjct: 238 AEIGRVQGEGIVTFPDVLCTTPRGRYDIDMYSDFLRLRGKTYDYKVLYSSILRLFLLPKP 297
Query: 250 DGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSG 309
D FV+ LDPPI+QGQTRY FL + F +DE + EL ++ L ++ + +K + G
Sbjct: 298 DDIHFNFVVQLDPPIRQGQTRYPFLVMQFAKDEEMDAELNLDDETLTSTFQQEHNK-VEG 356
Query: 310 PTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIH 369
+EV++ I K + +KI P +F TG +AV CS K G IY L++ +FI K P+
Sbjct: 357 QAHEVVSIIFKGLARKKIIFPQNFTSVTGQTAVKCSMKTNEGLIYFLDKYILFISKQPLL 416
Query: 370 IRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
+ ++ +V FAR GG S R+FD ++ K V FSS+ KEE+ + ++ + K +V
Sbjct: 417 VALSDLHSVKFARVGGALQSGRTFDLVLKKKDEVDLQFSSLSKEEHTVIDEYFKGKGKKV 476
Query: 427 KN 428
N
Sbjct: 477 LN 478
>gi|390603469|gb|EIN12861.1| SSrecog-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 607
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 240/437 (54%), Gaps = 41/437 (9%)
Query: 21 GKLKITDQNIVFK-NKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
GK ++ + +K + K + D+ + W ++ + LRI LK+ F GF
Sbjct: 17 GKFRVAAAGMAWKADGKESTTTMMKAEDIKWAQWLRVARNFQLRIGLKDRRRETFDGFVR 76
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ + K +F + + K++S +GWNWG T F G L+F V+N T+FE+PL V+
Sbjct: 77 EDHDRLAALLKQHFGVVLETKDVSFKGWNWGVTDFQGEDLAFLVSNKTSFELPLNHVANS 136
Query: 140 -TTGKNEVTVEFH----PNDEAAESLIEMRFYIPTNEI------AGD------------T 176
G+ EV++EF P+ +A E L+E+RFY+P AG
Sbjct: 137 NIAGRTEVSLEFANLPTPSKKADE-LVEIRFYVPGTHTKTRGSDAGSQQSENEEEDGEEI 195
Query: 177 DPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIP 236
+AF D++ +A + GD I F E+ LTPRGRYD+ +F F +L GKT+DYKI
Sbjct: 196 SAAQAFHDAIKEKAEIGQVAGDIILGFEEVLVLTPRGRYDVDMFPEFLRLRGKTYDYKII 255
Query: 237 ISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
+T+ RMF LP KD + F++S QTRY +L + FN++E EL SE+E+
Sbjct: 256 YTTIQRMFLLP-KDDQHVLFIVS--------QTRYQYLVMQFNREEEITAELNLSEEEIA 306
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPL 356
KY+ +L K PT+EV++ + + + +KI G+F+ G + C+ KA G ++ L
Sbjct: 307 -KYD-RLKKNYEDPTFEVVSGVFRALSGKKIIGVGTFQSRHGHPGIKCNLKAIQGDLFML 364
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFARSG---GST--RSFDFEIELKSGVLHTFSSIEKEE 411
E+ F+ K P+ I +I V F+R G G+T R+FD +I KSG +TF++I K+E
Sbjct: 365 EKYVFFVSKSPMLIEISDIHQVVFSRVGSGMGATAARTFDLKIVTKSGPEYTFTAINKDE 424
Query: 412 YGKLFDFIREKKLRVKN 428
+ F+++KK+RVKN
Sbjct: 425 HEPTEAFLKDKKVRVKN 441
>gi|330932790|ref|XP_003303910.1| hypothetical protein PTT_16311 [Pyrenophora teres f. teres 0-1]
gi|311319777|gb|EFQ87991.1| hypothetical protein PTT_16311 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 276/561 (49%), Gaps = 76/561 (13%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK+
Sbjct: 21 PGATRFSDSGFGWK-PANGETYTCDQSQIIQAQWSRAARGYEVKILSRNDGVIQLDGFKQ 79
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FKT + I + +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 80 EDFDRVSKVFKTWYGISLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 139
Query: 140 T-TGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------N 170
GKNEV V+F P D A + L+EMRFYIP N
Sbjct: 140 NLAGKNEVAVDFSLPADGDAGANGSLGGARFRGKKSAGARDQLVEMRFYIPGLASKKEKN 199
Query: 171 EIAGD---------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
E D T+ F +++M +A + GD A F +I LTPRGR+DI ++
Sbjct: 200 EDGEDASGAEDGEETNAANLFYETLMEKAEIGEVAGDTFATFLDILHLTPRGRFDIDMYE 259
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F +D
Sbjct: 260 SSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFKRD 319
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTS 340
E ++L L +KY+ KL P V+A I K + ++IT P F H S
Sbjct: 320 EEVNLDLNMKGDLLADKYKDKLQSHYEAPIATVVADIFKGLSGKRITRPSRDFISHHEQS 379
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ L++ F+FI KP +I + IA+V +R GG ++R+FD +K
Sbjct: 380 GVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASVTMSRVGGAMAASRTFDITFTMK 439
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEKEPD 451
G+ +EE L +F R K ++ KN +G + ED SSDD + +
Sbjct: 440 HGMAE-----HQEEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDGQPAN 494
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED------ 505
R +A+ +DES DEDF D +ES+V EE+DS+ + SD D
Sbjct: 495 -------RGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDAEMEDA 539
Query: 506 -SDASEGTKKKKKEKSRKTIT 525
SD +E ++ K+K ++ +
Sbjct: 540 ESDTAEAVPERPKKKQKRVLV 560
>gi|189202332|ref|XP_001937502.1| FACT complex subunit pob3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984601|gb|EDU50089.1| FACT complex subunit pob3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 582
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 278/564 (49%), Gaps = 76/564 (13%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PG + +D +K G+ + + W + + ++I +N + + GFK+
Sbjct: 44 PGATRFSDSGFGWK-PANGETYTCDQSQIIQAQWSRAARGYEVKILSRNDGVIQLDGFKQ 102
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FKT + I + +E ++RGWNWG F L+F+V N AFE+P +VS
Sbjct: 103 EDFDRVSKVFKTWYGISLDNREHALRGWNWGKADFGKAELTFNVANRPAFEVPYTEVSNT 162
Query: 140 T-TGKNEVTVEFH-PNDE--------------------AAESLIEMRFYIPT-------N 170
GKNEV V+F P D A + L+EMRFYIP N
Sbjct: 163 NLAGKNEVAVDFSLPTDGDAGANGSLGGARFRGKKSAGARDQLVEMRFYIPGLASKKEKN 222
Query: 171 EIAGD---------TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
E D T+ F +++M +A + GD A F +I LTPRGR+DI ++
Sbjct: 223 EDGEDASGAEDGEETNAANLFYETLMEKAEIGEVAGDTFATFLDILHLTPRGRFDIDMYE 282
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
S F+L GKT+DYKI +V + LP D I LDPP++QGQTRY FL + F +D
Sbjct: 283 SSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGLDPPLRQGQTRYPFLVMQFKRD 342
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTS 340
E ++L L+EKY+ KL P V+A I K + ++IT P F H S
Sbjct: 343 EEVNLDLNMKGDLLEEKYKDKLQSHYEAPIATVVADIFKGLSGKRITRPSRDFISHHEQS 402
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELK 397
V CS KA G+++ L++ F+FI KP +I + IA+V +R GG ++R+FD +K
Sbjct: 403 GVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASVTMSRVGGAMAASRTFDITFTMK 462
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYK-EDFGSSDDEKEPD 451
G+ +EE L +F R K ++ KN +G + ED SSDD + +
Sbjct: 463 HGMAE-----HQEEQQPLENFFRAKGIKTKNEMADDSGAILAAALQDEDLASSDDGQPAN 517
Query: 452 AYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEG 511
R +A+ +DES DEDF D +ES+V EE+DS+ + SD D++ +
Sbjct: 518 -------RGSADE-------DDESVDEDFQAD-SESEVGEEFDSDHQSSGSDSDAEMEDA 562
Query: 512 TKKKKKEKSRKTITISEKPRKSKK 535
+S + E+P+K +K
Sbjct: 563 -------ESDMAEAVPERPKKKQK 579
>gi|408391764|gb|EKJ71132.1| hypothetical protein FPSE_08638 [Fusarium pseudograminearum CS3096]
Length = 566
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 268/516 (51%), Gaps = 50/516 (9%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS-LHRFAGFKE 79
GK + + +K G ++ ++ W + + ++I ++ S + + GF++
Sbjct: 19 GKCRFAETGFGWKPVGGGDTFTLDHNNIASAQWSRAAKGYEIKIVQRSKSGIIQLDGFQQ 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FK + + KE ++RGWNWG +F + L+F V N AFE+P ++
Sbjct: 79 EDYDRLAKVFKNWYSTVLESKEHALRGWNWGKAEFSKSELTFSVQNRPAFELPYSEIGNT 138
Query: 140 T-TGKNEVTVEFHPNDEAAES------------------LIEMRFYIPT--------NEI 172
G+NEV VE + A + L+EMRFYIP E
Sbjct: 139 NLAGRNEVAVEMALPESGANAQLGGARSKGSKAAAGRDQLVEMRFYIPGVTTRKEAEGED 198
Query: 173 AG--------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
AG + + F ++++++A + GD IA F ++ LTPRGR+DI ++ + F
Sbjct: 199 AGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEASF 258
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT+DYKI + + LP D V+ LDPP++QGQTRY F+ + F +DE
Sbjct: 259 RLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDPPLRQGQTRYPFVVMQFKKDEEV 318
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVT 343
++L +E+ELK KY+ KL+ P ++V+AKI + + NRKI+ P F H +
Sbjct: 319 TIDLNLNEEELKSKYQDKLEPHYEEPLHQVVAKIFRGLGNRKISSPAKDFITHRNQYGIK 378
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGV 400
CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R G+ + FD + LK+G
Sbjct: 379 CSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVSGAVSALSTFDITVLLKNGA 438
Query: 401 LHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKR 459
+ FS+I +E+ L F + K LRVKN + D+ E +
Sbjct: 439 GSSQFSNISREDLKALESFFKLKGLRVKNEIDEDANLLAAAMNQQMDDSEDEV------- 491
Query: 460 EAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
AA+ D ++++ES DEDF D +ESDVAEEYDS
Sbjct: 492 -AAKADRGSADEDEESVDEDFRTD-SESDVAEEYDS 525
>gi|358399200|gb|EHK48543.1| hypothetical protein TRIATDRAFT_305357 [Trichoderma atroviride IMI
206040]
Length = 568
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 264/532 (49%), Gaps = 76/532 (14%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W + + +RI +N + + GF++
Sbjct: 19 GKCRFAETGFGWKPAGGGDTFTLDHSNIGSAQWSRAARGYEIRILQRNSGIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + + KE ++RGWNWG +F + ++F+V N AFE+P ++
Sbjct: 79 DYERLSKIFKNWYSTALESKEHALRGWNWGKAEFSKSEITFNVQNRPAFELPYSEIGNTN 138
Query: 140 TTGKNEVTVEF----HPNDEAA------------------ESLIEMRFYIPT-------- 169
G+NEV +E + ND + L+EMRFYIP
Sbjct: 139 LAGRNEVALELSLPLNANDTGTNGQLGGARGKGKKAGAGKDQLVEMRFYIPGVTTKKETE 198
Query: 170 NEIAG-------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
E AG + + F ++++ +A + GD IA F ++ LTPRGR+DI ++ +
Sbjct: 199 GEDAGSDGGEEEEKNAATLFYETLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEA 258
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI V + LP D VI LDPP++QGQTRY F+ + F +DE
Sbjct: 259 SFRLRGKTYDYKIQYEAVKKFMVLPKPDEMHCLLVIGLDPPLRQGQTRYPFVVMQFKKDE 318
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
++L E EL+ KY+ KL+ P + V+AK+ + + N+KI+ P F H
Sbjct: 319 EVTIDLNIEEAELESKYKDKLEPHYEEPLHHVVAKMFRGLGNKKISSPAKDFLTHRNQYG 378
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKS 398
+ C+ KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R G+ + FD + +K+
Sbjct: 379 IKCAIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVSGAVSALSTFDITVVMKN 438
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA-YLAR 456
G + FS+I +E+ L F + K LRVKN E + DA LA
Sbjct: 439 GAGSSQFSNINREDLKALESFFKLKGLRVKN------------------EIDEDANLLAA 480
Query: 457 VKREAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDSN 496
RE A DD DDE D DF D ++SDVAEEYDSN
Sbjct: 481 ALREEA-MDDSDDEVVVNKADRGSADEDEESVDEDFQAD-SDSDVAEEYDSN 530
>gi|342884654|gb|EGU84859.1| hypothetical protein FOXB_04640 [Fusarium oxysporum Fo5176]
Length = 564
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 266/531 (50%), Gaps = 80/531 (15%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS-LHRFAGFKE 79
GK + + +K G ++ ++ W + + ++I + S + + GF++
Sbjct: 19 GKCRFAETGFGWKPAGGGDTFTLDHNNIASAQWSRAAKGYEIKIVQRAKSGIIQLDGFQQ 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FK + + KE ++RGWNWG +F + L+F V N AFE+ ++
Sbjct: 79 EDYDRLAKVFKNWYSTVLESKEHALRGWNWGKAEFSKSELTFSVQNRPAFELAYSEIGNT 138
Query: 140 -TTGKNEVTVEFHPNDEAAES------------------LIEMRFYIPT--------NEI 172
G+NEV VE D A + L+EMRFYIP E
Sbjct: 139 NLAGRNEVAVEMALPDTGANAQLGGARSKGSKAAAGRDQLVEMRFYIPGVTTRKEAEGED 198
Query: 173 AG--------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
AG + + F ++++++A + GD IA F ++ LTPRGR+DI ++ + F
Sbjct: 199 AGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEASF 258
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT+DYKI + + LP D V+ LDPP++QGQTRY F+ + F +DE
Sbjct: 259 RLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDPPLRQGQTRYPFVVMQFKKDEEV 318
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVT 343
++L +E ELK KY+ KL+ P ++V+AKI + + NRKI+ P F H +
Sbjct: 319 TIDLNLNEDELKSKYQDKLEPHYEEPLHQVVAKIFRGLGNRKISSPAKDFITHRNQYGIK 378
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGV 400
CS KA+ G++Y LE+ F+F+ KP ++I +E+ +V F+R G+ + FD + LK+G
Sbjct: 379 CSIKASEGFLYCLEKAFMFVPKPAVYIAYEQTQSVTFSRVSGAVSALSTFDITVLLKNGA 438
Query: 401 LHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKR 459
+ FS+I +E+ L F + K LRVKN E + DA L
Sbjct: 439 GSSQFSNISREDLKALETFFKLKGLRVKN------------------EIDEDANLL---- 476
Query: 460 EAAERDDEDDEDEDE---------------STDEDFNPDQAESDVAEEYDS 495
AA D + D+ EDE S DEDF D +ESDVAEEYDS
Sbjct: 477 -AAALDQQMDDSEDEVAAKADRGSADEDEESVDEDFRTD-SESDVAEEYDS 525
>gi|358380030|gb|EHK17709.1| hypothetical protein TRIVIDRAFT_82979 [Trichoderma virens Gv29-8]
Length = 570
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 261/532 (49%), Gaps = 76/532 (14%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + +K G ++ ++ W + + +RI +N + + GF++
Sbjct: 19 GKCRFAETGFGWKPAGGGDTFTLDHSNIGSAQWSRAARGYEIRILQRNSGIIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK + + KE ++RGWNWG +F + F+V N AFE+P ++
Sbjct: 79 DYERLSKIFKNWYSTVLENKEHALRGWNWGKAEFSKAEIVFNVQNRPAFEMPYSEIGNTN 138
Query: 140 TTGKNEVTVEF----HPNDEAA------------------ESLIEMRFYIPT-------- 169
G+NEV VE + ND + L+EMRFYIP
Sbjct: 139 LAGRNEVAVELALPLNANDTGTNGQLGGARGKGKKAGAGKDQLVEMRFYIPGVTTKKETE 198
Query: 170 NEIAG-------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
E AG + + F ++++ +A + GD IA F ++ LTPRGR+DI ++ +
Sbjct: 199 GEDAGSDAGEEEEKNAATLFYETLIEKAEIGETAGDTIATFLDVLHLTPRGRFDIDMYEA 258
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+L GKT+DYKI V + LP D I LDPP++QGQTRY F+ + F +DE
Sbjct: 259 SFRLRGKTYDYKIQYEAVKKFMVLPKPDEMHCLLCIGLDPPLRQGQTRYPFVVMQFKKDE 318
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSA 341
++L E EL+ KY+ KL+ P + V+AKI + + N+KI+ P F H
Sbjct: 319 EVTIDLNIDEAELESKYKDKLEPHYEEPLHHVVAKIFRGLGNKKISSPAKDFLTHRNQYG 378
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKS 398
+ CS KA+ G++Y LE+ F+F+ KP +I +E+ +V F+R G+ + FD + +K+
Sbjct: 379 IKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVSGAVSALSTFDITVVMKN 438
Query: 399 GVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDA-YLAR 456
G + FS+I +E+ L F + K LRVKN E + DA LA
Sbjct: 439 GAGSSQFSNINREDLKALESFFKLKGLRVKN------------------EIDEDANLLAA 480
Query: 457 VKREAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYDSN 496
RE A D+ DDE D DF D ++SDVAEEYDSN
Sbjct: 481 ALREEA-MDESDDEVVAPKADRGSADEDEESVDEDFQAD-SDSDVAEEYDSN 530
>gi|346322018|gb|EGX91617.1| FACT complex subunit pob3 [Cordyceps militaris CM01]
Length = 570
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 263/513 (51%), Gaps = 48/513 (9%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+ + + +K G ++ ++ W K+ + +RI +N + + GF++
Sbjct: 19 GRCRFAETGFGWKPNGGGDTFTLDHNNISNAQWSKVAKGYEIRILQRNSGVIQLDGFQQE 78
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D++ FK + + KE ++RGWNWG +F + F+V N AFE+P ++
Sbjct: 79 DYDRLSKVFKNWYSHVLENKEHALRGWNWGKAEFSKAEIVFNVQNRPAFELPYAEIGNTN 138
Query: 141 -TGKNEVTVEFH----PNDEAA------------ESLIEMRFYIPTN----EIA------ 173
G+NEV VE ND A + L+EMRFY+P E+A
Sbjct: 139 LAGRNEVAVEMSLPQDGNDTATANGKGKKAAAGRDQLVEMRFYVPGTTTKKEVADGEDGE 198
Query: 174 -GDTDP------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQL 226
D +P F +++M++A + GD IA F ++ LTPRGR+DI ++ + F+L
Sbjct: 199 GSDQEPEAEKNAATLFYETLMDKAEIGEMAGDTIATFLDVLHLTPRGRFDIDMYEASFRL 258
Query: 227 HGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEM 286
GKT+DYKI + + LP D I LDPP++QGQTRY F+ + F +DE +
Sbjct: 259 RGKTYDYKIQYDAIKKFMVLPKPDDMHCMLCIGLDPPLRQGQTRYPFVVMQFKKDEEVTI 318
Query: 287 ELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCS 345
+L E L+ KY+ KLD P + V+AKI + + N+KI+ P F H + CS
Sbjct: 319 DLNLDEATLESKYKDKLDAHYEEPLHHVVAKIFRGLANKKISSPAKDFITHRSQYGIKCS 378
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLH 402
KA+ G++Y LE+ F+F+ KP +I +E+ ++ F+R GG+ + FD + +K G
Sbjct: 379 IKASEGFLYCLEKAFMFVPKPATYIAYEQTQSITFSRVGGAVSTLSTFDITVAMKGGTGS 438
Query: 403 T-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY------KEDFGSSDDEKEPDAYLA 455
+ FS+I +E+ L F + K LRVKN E N ++D SDDE A ++
Sbjct: 439 SQFSNINREDLKALETFFKLKGLRVKNE-IDEDANLLAAALREQDMDDSDDEVVKGAGVS 497
Query: 456 RVKREAAERDDEDDEDE-DESTDEDF-NPDQAE 486
R +A+ D+E +++ T+ D +PD +E
Sbjct: 498 GADRGSADEDEESVDEDFHAETESDISDPDASE 530
>gi|119189221|ref|XP_001245217.1| hypothetical protein CIMG_04658 [Coccidioides immitis RS]
gi|392868116|gb|EAS33860.2| FACT complex subunit pob3 [Coccidioides immitis RS]
Length = 571
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 263/526 (50%), Gaps = 64/526 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G ++ ++ W + + L+I + G + + GF +
Sbjct: 15 PGKCKLAESGLGWKPSGGGDTFTLDKSNIGAAQWSRAAKGYELKILPRAGGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++ FK + I++ +E ++RGWNWG F LSF+V N AFEIP +++
Sbjct: 75 EDFERTSKAFKLWYGINLENREHALRGWNWGKADFGKAELSFNVQNRPAFEIPYSEITNT 134
Query: 140 T-TGKNEVTVEFHPNDE----------------------AAESLIEMRFYIPTNEIA--- 173
G+NEV VEF + + + L+EMRFYIP +
Sbjct: 135 NLAGRNEVAVEFSLSTDNGSHGVNGQPERTKNYGKKAGAGKDELVEMRFYIPGTAVKKDQ 194
Query: 174 --GDTDPVEA-----------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
GD V+ F +++M +A + GD A F ++ LTPRGR+DI ++
Sbjct: 195 ADGDDKSVDGEEPEELNAANLFYETLMEKAEIGEVAGDTFATFPDVLHLTPRGRFDIDMY 254
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+ +L GKT+DYKI ++ + F LP D I LDPP++QGQTRY FL +
Sbjct: 255 ENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITIGLDPPLRQGQTRYPFLVMQLKL 314
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGT 339
D+ ++L +++ L+ +Y+ KL P ++V+ K+ + + +K+ +P F H
Sbjct: 315 DDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHQVITKVFRGLSGKKVIMPSKDFTSHHNH 374
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIEL 396
+ CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD + L
Sbjct: 375 RGIKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAVSASRTFDITMTL 434
Query: 397 KSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGK-------GEKPNYKEDFGSSDDEKE 449
K G H FS+I +EE L F + K +R KN + E GSSD+E +
Sbjct: 435 KGGGEHQFSNINREEQQPLELFFKAKNIRFKNEMAEDTSALIAAALDNDELMGSSDEEVD 494
Query: 450 PDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
R +A+ D+E +++ ++ ++ESDVAEEYDS
Sbjct: 495 GG------HRGSADEDEESVDEDFQA--------ESESDVAEEYDS 526
>gi|409042168|gb|EKM51652.1| hypothetical protein PHACADRAFT_177070 [Phanerochaete carnosa
HHB-10118-sp]
Length = 508
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 232/439 (52%), Gaps = 50/439 (11%)
Query: 17 ALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFL-----KNG 69
L P GKL+I + ++ + + + I ++ + W ++ + LRI L KN
Sbjct: 11 GLSPEAGKLRIAVSGMAWRGEDSQQTIAIPQDEMKWAQWIRVARNYQLRIGLGNKDKKNA 70
Query: 70 SLHR--FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTT 127
R F GF + D++ K +F I + KE SV+GWNWG T F G L F V+N T
Sbjct: 71 DRKRETFDGFARDDHDRLAQLLKQHFSIVLETKEASVKGWNWGMTDFQGQDLVFLVSNKT 130
Query: 128 AFEIPLRDVSQC-TTGKNEVTVEF------------HPNDEAAESLIEMRFYIP---TNE 171
AFE+PL V+ G+ EV++E+ H DE L E+RFY+P T E
Sbjct: 131 AFELPLAKVANSNIAGRTEVSLEYPVAAQVDKKASRHGPDE----LTEIRFYVPGTHTKE 186
Query: 172 IAG-------------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
G + +AF D + +A + TGD I F E+ LTPRGRYD+
Sbjct: 187 ARGSEEGSQNSEDEGEEISAAQAFHDVIKEKAEIGQVTGDIILSFEEVLVLTPRGRYDVD 246
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
+F F +L GKT+DYKI +T+ ++F LP KD F++ L PI+QGQTRY +L + F
Sbjct: 247 MFRDFLRLRGKTYDYKILYTTIAKLFLLP-KDDMHVLFILGLSTPIRQGQTRYQYLVMQF 305
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTG 338
++DE S EL E+E+ EKY+ +L K PT+EV++ + + + RKI GSF+ G
Sbjct: 306 SRDEESTAELNMPEEEV-EKYD-RLKKSYDEPTFEVVSGVFRALSGRKIIGAGSFQSRDG 363
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG-----STRSFDFE 393
A+ + KA G ++ LE+ F+ K P I +I + F+R G + R+FD +
Sbjct: 364 HPALKANLKAVQGDLFLLEKYIFFVSKTPTLIDLSDIHQIVFSRLGAGVGATAARTFDLK 423
Query: 394 IELKSGVLHTFSSIEKEEY 412
I KSG TF+SI KEE+
Sbjct: 424 IVTKSGPEFTFTSINKEEH 442
>gi|303323253|ref|XP_003071618.1| Structure-specific recognition protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111320|gb|EER29473.1| Structure-specific recognition protein [Coccidioides posadasii C735
delta SOWgp]
gi|320035307|gb|EFW17249.1| structure-specific recognition protein [Coccidioides posadasii str.
Silveira]
Length = 571
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 263/526 (50%), Gaps = 64/526 (12%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G ++ ++ W + + L+I + G + + GF +
Sbjct: 15 PGKCKLAESGLGWKPSGGGDTFTLDKSNIGAAQWSRAAKGYELKILPRAGGVIQLDGFDQ 74
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ ++ FK + I++ +E ++RGWNWG F LSF+V N AFEIP +++
Sbjct: 75 EDFERTSKAFKLWYGINLENREHALRGWNWGKADFGKAELSFNVQNRPAFEIPYSEITNT 134
Query: 140 T-TGKNEVTVEFHPNDE----------------------AAESLIEMRFYIPTNEIA--- 173
G+NEV VEF + + + L+EMRFYIP +
Sbjct: 135 NLAGRNEVAVEFSLSTDNGSHGVNGQPERTKNYGKKAGAGKDELVEMRFYIPGTAVKDHQ 194
Query: 174 --GDTDPVEA-----------FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
GD V+ F +++M +A + GD A F ++ LTPRGR+DI ++
Sbjct: 195 ADGDDKSVDGEEPEELNAANLFYETLMEKAEIGEVAGDTFATFPDVLHLTPRGRFDIDMY 254
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+ +L GKT+DYKI ++ + F LP D I LDPP++QGQTRY FL +
Sbjct: 255 ENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITIGLDPPLRQGQTRYPFLVMQLKL 314
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGT 339
D+ ++L +++ L+ +Y+ KL P ++V+ K+ + + +K+ +P F H
Sbjct: 315 DDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHQVITKVFRGLSGKKVIMPSKDFTSHHNH 374
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIEL 396
+ CS KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD + L
Sbjct: 375 RGIKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAVSASRTFDITMTL 434
Query: 397 KSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGK-------GEKPNYKEDFGSSDDEKE 449
K G H FS+I +EE L F + K +R KN + E GSSD+E +
Sbjct: 435 KGGGEHQFSNINREEQQPLELFFKAKNIRFKNEMAEDTSALIAAALDNDELMGSSDEEVD 494
Query: 450 PDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS 495
R +A+ D+E +++ ++ ++ESDVAEEYDS
Sbjct: 495 GG------HRGSADEDEESVDEDFQA--------ESESDVAEEYDS 526
>gi|302891995|ref|XP_003044879.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725804|gb|EEU39166.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 558
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 266/534 (49%), Gaps = 90/534 (16%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-NGSLHRFAGFKE 79
GK + + +K G ++ ++ W + + ++I + N + + GF++
Sbjct: 19 GKCRFAETGFGWKPASGGDTFTLDHSNIASAQWSRAAKGYEIKILQRANSGIIQLDGFQQ 78
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D++ FK + + KE ++RGWNWG +F + L+F V N AFE+ +++
Sbjct: 79 EDYDRLSKVFKNWYSTVLENKEHALRGWNWGKAEFAKSELTFSVQNRPAFELAYSEIANT 138
Query: 140 -TTGKNEVTVEFHPNDEAAES----------------------LIEMRFYIPT------- 169
G+NEV VE AA+S L+EMRFYIP
Sbjct: 139 NLAGRNEVAVEMSLPATAADSGANPSLGGARSKGSKAAAGRDQLVEMRFYIPGVTTRKEA 198
Query: 170 -NEIAG--------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
E AG + + F ++++++A + GD IA F ++ LTPRGR+DI ++
Sbjct: 199 EGEDAGSDAGNAEEEKNAATLFYETLIDKAEIGETAGDTIATFLDVLHLTPRGRFDIDMY 258
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
+ F+L GKT+DYKI + + LP D VI LDPP++QGQTRY F+ + F +
Sbjct: 259 EASFRLRGKTYDYKIQYDAIKKFMVLPKPDEVHYMLVIGLDPPLRQGQTRYPFVVMQFKK 318
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTS 340
DE ++L +E+ELK+KY+ KL+ P ++V+AKI + + N+KI+ H
Sbjct: 319 DEEVTIDLNLNEEELKKKYQDKLEPHYEEPLHQVVAKIFRGLGNKKIS-------HRNQY 371
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELK 397
+ CS KA+ G +Y LE+ F+F+ KP +I +E+ +V F+R GG+ + FD + LK
Sbjct: 372 GIKCSIKASEGSLYCLEKAFMFVPKPATYIAYEQTQSVTFSRVGGAVSALSTFDITVLLK 431
Query: 398 SGVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLAR 456
+G + FS+I +E+ L F + K LRVKN E + DA L
Sbjct: 432 NGAGSSQFSNISREDLKALETFFKLKGLRVKN------------------EIDEDANLL- 472
Query: 457 VKREAAERDDEDDEDEDEST---------------DEDFNPDQAESDVAEEYDS 495
AA D E D+ EDE DEDF D +ESDVAEE+DS
Sbjct: 473 ----AAALDQEMDDSEDEVVAKADRGSADEDEESVDEDFQAD-SESDVAEEFDS 521
>gi|361123883|gb|EHK96027.1| putative FACT complex subunit POB3 [Glarea lozoyensis 74030]
Length = 438
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 233/444 (52%), Gaps = 66/444 (14%)
Query: 128 AFEIPLRDVSQCT-TGKNEVTVEF----------------------HPNDEAAESLIEMR 164
AFEIP +++ GKNEV VEF + L+EMR
Sbjct: 5 AFEIPYSEITNTNLAGKNEVAVEFSLPANGDDTGTNGSLGGARGKGKKAGAGKDQLVEMR 64
Query: 165 FYIPT-----NEIAGDTDPVEA-----------FKDSVMNQASVINATGDAIAVFNEIQC 208
FYIP + GD P +A F D++M++A + GD A F ++
Sbjct: 65 FYIPGVTTKKEALEGDDAPSDAEGDEEQNAANLFYDTLMDKAEIGEVAGDTFATFLDVLH 124
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRGR+DI ++ + F+L GKT+DYKI + + LP D + LDPP++QGQ
Sbjct: 125 LTPRGRFDIDMYENSFRLRGKTYDYKIQYEHIKKFMCLPKPDETHFMICVGLDPPLRQGQ 184
Query: 269 TRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKIT 328
TRY FL + F +DE ++L +E+ LKEKY GKL+ P ++V+ + + + +K+
Sbjct: 185 TRYPFLVMQFKKDEEVTIDLNMTEELLKEKYGGKLEPHYEQPFHQVVTAVFRGLAAKKVN 244
Query: 329 VPG-SFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS- 386
P F H G + CS KA+ G++Y LE+ F+F+ KP +I FE++ TV F+R GG+
Sbjct: 245 QPAKDFSSHHGQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISFEQVKTVVFSRVGGAV 304
Query: 387 --TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN------TGKGEKPNYK 438
+R+FD ++LK G FS+I +EE L DF R K+LRVKN T +
Sbjct: 305 SASRTFDITVQLKEGGESQFSNINREEQKPLEDFFRIKQLRVKNEMEEDNTAILKAALRA 364
Query: 439 EDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPT 498
E+ SSD+E AR R +A D E D DEDF D ++SDVAEE+DSN
Sbjct: 365 EELQSSDEE----VVAARADRGSAAEDSESD-------DEDFKSD-SDSDVAEEFDSNHE 412
Query: 499 PTDS-DED----SDASEGTKKKKK 517
+ S DED SDA E KKK K
Sbjct: 413 SSGSEDEDGGPASDAEERPKKKAK 436
>gi|225562827|gb|EEH11106.1| FACT complex subunit pob3 [Ajellomyces capsulatus G186AR]
Length = 605
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 271/586 (46%), Gaps = 121/586 (20%)
Query: 22 KLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETE 81
K K+ + + ++ G ++ ++ W + + L+I ++ + + GF++ +
Sbjct: 13 KCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQED 72
Query: 82 IDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT- 140
++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 73 FERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTNL 132
Query: 141 TGKNEVTVEFH-PNDEAA---------------------ESLIEMRFYIPTNEI------ 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 133 AGKNEVAVEFSLPADGVTGANGQSEGSTKNRGRKAGAGRDELVEMRFYIPGTALKKEKPE 192
Query: 173 ------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
A + + F +++M++A + + GD A F ++ LTPRGR+DI ++
Sbjct: 193 GEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDMY 252
Query: 221 NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQ 280
S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 253 ESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQLKL 312
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVP---------- 330
D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P
Sbjct: 313 DDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVRSATG 372
Query: 331 ------------------------GSFR--------GHTGTSAVTCSYKAAAGYIYPLER 358
G R H G S V CS KA G ++ L++
Sbjct: 373 LSQSLSEYRNKNSGPYSENIQSPNGRLRSKITDPQYSHHGHSGVKCSIKANEGLLFCLDK 432
Query: 359 GFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEKEEYGK 414
F+F+ KP +++ E I+ + +R GG ++R+FD + LK G+ H FS+I +EE
Sbjct: 433 SFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQP 492
Query: 415 LFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDE 474
L +F + K +R KN +DD P A +A AA +DE DED
Sbjct: 493 LEEFFKAKNIRFKNE-------------MADD---PSALIA-----AALDNDEGSSDEDV 531
Query: 475 STDEDFNP-------------DQAESDVAEEYDSNPTPTDSDEDSD 507
+ D ++ESDVAEEYDS + S D D
Sbjct: 532 AVGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESSGSGSDVD 577
>gi|345564713|gb|EGX47673.1| hypothetical protein AOL_s00083g181 [Arthrobotrys oligospora ATCC
24927]
Length = 581
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 259/507 (51%), Gaps = 58/507 (11%)
Query: 51 VNWQKLVGTWALRIFLK-NGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNW 109
+W + + +I+LK + + GF++T+ D++ K ++ + +E S++GWNW
Sbjct: 50 CHWSRAARGYECKIYLKLKNEIMQLDGFEQTDFDRLKDILKHSYNAVLENREHSLKGWNW 109
Query: 110 GGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE------------- 155
G +F L F+VNN AFEIP ++S GK EV +EF +
Sbjct: 110 GKAEFHKKELFFNVNNKPAFEIPFDEISNSNLAGKAEVAIEFADKSDLEANASGKKNKKV 169
Query: 156 --AAESLIEMRFYIPTNEIAGDTD----------------------------PVEAFKDS 185
+ L+EMRFYIP GD D E F D+
Sbjct: 170 FAGVDQLMEMRFYIPGMPEKGDGDDEDNESKAGSEDEADDDGEGKKKKEARTAAEVFYDT 229
Query: 186 VMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFT 245
++ +A + + GD+ A+F I LTPRGRYD+ ++ + F+L GKT+DYKIP V + F
Sbjct: 230 LVTKADIGDVAGDSFAIFPSILFLTPRGRYDVDMYEASFRLRGKTYDYKIPYENVKKFFL 289
Query: 246 LPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDK 305
LP + V+ L+P ++QGQT+Y FL L F QDE +L SE +L+ K++ +L
Sbjct: 290 LPKPGDMHHLLVLGLEPALQQGQTKYPFLVLQFQQDEELTCDLNISEADLENKFQNRLQM 349
Query: 306 ELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
+ V++ I K + +K+T P F + V CS KA G ++ L++ +F+
Sbjct: 350 HYENSAHLVLSSIFKGVTGKKMTTPSKDFTSYNQQYGVKCSLKANEGNLFFLDKALLFVP 409
Query: 365 KPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIRE 421
KP I++ F+ + V +R GG ++R+FD +++ SG H F++I +EE L +F +
Sbjct: 410 KPAIYVSFDHVQFVTLSRLGGQVSASRTFDVTVKMSSGSEHQFNNINREEQASLENFFKA 469
Query: 422 KKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFN 481
+ +++KN E + + + D ++RV R +A+ DDE +++ E+
Sbjct: 470 RGVKIKND-LVEDTSLLRTALDDEMGDDDDMEVSRVDRGSADEDDESVDEDFEA------ 522
Query: 482 PDQAESDVAEEYDSNPTPTDSDEDSDA 508
++ESDVAEEYDSN + S + +A
Sbjct: 523 --ESESDVAEEYDSNHESSGSGSEDEA 547
>gi|315044457|ref|XP_003171604.1| hypothetical protein MGYG_06145 [Arthroderma gypseum CBS 118893]
gi|311343947|gb|EFR03150.1| hypothetical protein MGYG_06145 [Arthroderma gypseum CBS 118893]
Length = 559
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 238/453 (52%), Gaps = 50/453 (11%)
Query: 20 PGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKE 79
PGK K+ + + +K G ++ ++ W + + L+IF + + + GF +
Sbjct: 92 PGKCKLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIFSRTCGVIQLDGFDQ 151
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC 139
+ D+ FK + +++ +E ++RGWNWG +F LSF+V N AFE+P ++S
Sbjct: 152 DDFDRASKAFKIWYGVNLTNREHALRGWNWGKAEFGKAELSFNVQNRPAFEVPYSEISNT 211
Query: 140 -TTGKNEVTVEFH-PNDEAAES---------------------LIEMRFYIP-------- 168
G+NEV VEF P D+A+ + L+EMRFYIP
Sbjct: 212 NLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGVGRDELVEMRFYIPGTVTKKEE 271
Query: 169 --------TNEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
N+ A + VE F +++M++A + + GD A F ++ LTPRGR
Sbjct: 272 GDEQGEGEDNKSADGEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGR 331
Query: 215 YDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFL 274
+D+ ++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL
Sbjct: 332 FDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFL 391
Query: 275 TLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-F 333
+ D+ ++L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F
Sbjct: 392 VMQLKLDDEISIDLNMTDELLQSRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVIMPSRDF 451
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSF 390
H G S V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++R+F
Sbjct: 452 SSHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSASRTF 511
Query: 391 DFEIELKSGVL-HTFSSIEKEEYGKLFDFIREK 422
D + LK G H FS+I +EE L DF + +
Sbjct: 512 DITMTLKGGQGEHQFSNINREEQQPLEDFFKAR 544
>gi|403159751|ref|XP_003320329.2| hypothetical protein PGTG_01241 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168228|gb|EFP75910.2| hypothetical protein PGTG_01241 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 596
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 239/475 (50%), Gaps = 52/475 (10%)
Query: 1 MTEAL-EFQEVSSEFRGALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLV 57
MT A+ +F + +RG L P GKL+I + +K + + + D+ +V W K+
Sbjct: 1 MTAAVADFDHI---YRG-LQPSIGKLRIAASGLGWKPSDSPNIVTVAKDDIKWVQWIKVA 56
Query: 58 GTWALRIFL-------KNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWN 108
+ LRI L K G R F GF+ + +K+ + FK +F + + K+LS+RGWN
Sbjct: 57 RGYQLRIGLNKDRSDIKIGDRRRESFDGFRPEDQEKLSNLFKQHFHVTLETKDLSLRGWN 116
Query: 109 WGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEF------------------ 150
WG + L+F V AFE+PL V + K EV VEF
Sbjct: 117 WGKMDVQASDLAFLVAGKLAFEVPLGLVHNSSISKTEVAVEFLDQANQPKLDGLSGISRV 176
Query: 151 HPNDEAAESLIEMRFYIPTNEIA--------------GDTDPVEAFKDSVMNQASVINAT 196
+ + L+EMR Y+P N G+ +A D +M +A +
Sbjct: 177 NAKKSTTDQLVEMRLYVPGNASTNANEGNSEADDPADGELSAAQALHDLIMEKAEIGRVQ 236
Query: 197 GDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFF 256
G+ I F ++ C TPRGRYD+ + F +L GKT+DYK+ S++ ++F LP D F
Sbjct: 237 GEGIVTFPDVLCTTPRGRYDLDMHADFLRLRGKTYDYKVLYSSIQKLFLLPKPDDIHFLF 296
Query: 257 VISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMA 316
V+ LDPPI+QGQTRY FL + F +DE + E+ E L ++ + D ++ G +EV++
Sbjct: 297 VVQLDPPIRQGQTRYPFLVMQFAKDEEIDAEMNLDEDTLNSTFQ-QTDNKIEGQAHEVVS 355
Query: 317 KIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIA 376
+ K + +KI P +F G SA+ C+ KA G +Y L++ + I K I I ++
Sbjct: 356 IVFKGLAKKKIIFPQNFSSANGQSAIKCNMKANEGLLYFLDKYVLCISKQSILINLADLH 415
Query: 377 TVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+V FAR GG S R+FD + K V FSS+ +EE+ + + K +++N
Sbjct: 416 SVKFARVGGALQSGRTFDLVLTKKDEVDLQFSSLSREEHPVIESYFETKGKKIEN 470
>gi|449019281|dbj|BAM82683.1| probable structure specific recognition protein, recombination
signal sequence recognition protein, chromatin-specific
transcription elongation factor [Cyanidioschyzon merolae
strain 10D]
Length = 583
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 233/418 (55%), Gaps = 15/418 (3%)
Query: 17 ALCPGKLKITDQNIVFKNKKTGKVE-QINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFA 75
+L PG L+++ +++ + G + DL + W + LR K+GS F
Sbjct: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75
Query: 76 GFKETEIDKICSFFKTNFKI--DVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPL 133
GF+ + + + K + VP E V GWN+G + G + F + TAFE+P+
Sbjct: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135
Query: 134 RDVSQCT-TGKNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQ 189
D+SQ +G+NE+ +EFH +D A E L+EMRF PT E D + A + +
Sbjct: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEE---DAIALHAELSARVGS 192
Query: 190 ASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHK 249
AS + G+++ F E+ + PRGRYD+++F ++ +HGK+FDYKI TV RMF LP
Sbjct: 193 ASFM---GESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKP 249
Query: 250 DGRQNFFVISLDPPIKQGQTRY-HFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELS 308
D VISLDPPI+QG T Y H + L D+ E+ L +EL+++Y KL ++S
Sbjct: 250 DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKIS 309
Query: 309 GPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI 368
G ++V+ K+++V+V++ + P +F G A+ + A GY+YPLE F F++KPP
Sbjct: 310 GELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPT 369
Query: 369 HIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
++R+E++ V F R R FD ++ + +G F+++E+ E+ L+ F+ K++R+
Sbjct: 370 YLRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426
>gi|391330907|ref|XP_003739893.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Metaseiulus
occidentalis]
Length = 224
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 157/219 (71%), Gaps = 1/219 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
E+ +V E RGA+ PGKLK+TDQNIVFKN KTGKV+QIN +++ V WQ+L G + LRI
Sbjct: 6 FEYGDVWKEDRGAMAPGKLKLTDQNIVFKNAKTGKVDQINNGEVESVFWQRLAGAYGLRI 65
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
KN SL+RF GF+ E K+ FFK + +D+ KE S+ G NWG F VLSFD++
Sbjct: 66 QTKNPSLYRFGGFQNDERGKLREFFKEFYNLDMKTKEFSLTGRNWGTVNFDPVVLSFDID 125
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
AFEIPL VS C+T KNEVT+EF PND+A ++EMRFY+PT+ D D VEAFK
Sbjct: 126 KVPAFEIPLAYVSNCSTSKNEVTLEFQPNDDAPSCMMEMRFYVPTDP-NPDVDAVEAFKA 184
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
+VM++A + ATGDAIA FN +QCLTPRGRYDIKIF +F
Sbjct: 185 NVMSRAGITQATGDAIANFNGVQCLTPRGRYDIKIFTTF 223
>gi|452819554|gb|EME26610.1| structure-specific recognition protein 1 [Galdieria sulphuraria]
Length = 509
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 221/409 (54%), Gaps = 14/409 (3%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G L++ I ++ K+T + I+ +L + W + L L+ + +RF GF+E
Sbjct: 30 GTLRVHSGGISWRAKETARTVDIDKENLLSLRWIRGARGMQLVCVLRGDNTNRFEGFREQ 89
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD-VNNTTAFEIPLRDVSQC 139
+ + + K ++V ++GWNWG + G L F AF++PL +VSQ
Sbjct: 90 DFEVVNESCKEKLSLEVKRAPQPIKGWNWGDAELRGRALIFHSAEGVDAFDVPLEEVSQV 149
Query: 140 TT-GKNEVTVEFHPNDEAA---ESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINA 195
+EV +EFH +D AA E L+E+R Y+ A D +K + + S +
Sbjct: 150 QMPSSSEVALEFHVDDTAAKTDECLVELRLYVHNESHAADL-----YKGILKSAES--SF 202
Query: 196 TGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNF 255
TG+++ F ++ L PRGRY++ ++ + +LHGK+FDYKI + V RMF LP D
Sbjct: 203 TGESLINFVDMPLLVPRGRYEVDLYPNHLKLHGKSFDYKILYTAVTRMFLLPKPDEAHIT 262
Query: 256 FVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVM 315
FV+SLDPP++QG T Y L F +DE + E +E ELK +Y + G T+EV
Sbjct: 263 FVVSLDPPVRQGNTLYPHLVFQFQKDEEVDAEFALTENELKSRYPNLVGVS-GGATWEVF 321
Query: 316 AKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEI 375
+KI++ + + + P SF+ H G SAV + A GY++ LE F++KPP +IRFE++
Sbjct: 322 SKILRELTKKPLHSPISFKSHRGQSAVRTALGANDGYLFFLENCMFFVNKPPTYIRFEDV 381
Query: 376 ATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
+ F R R FD +I L SG FS+I++ E+ ++ F+ EK+L
Sbjct: 382 EMIEFKRM-DLERRFDLQITLSSGHSLLFSNIDRPEFDNIYTFLEEKRL 429
>gi|124809408|ref|XP_001348567.1| structure specific recognition protein [Plasmodium falciparum 3D7]
gi|23497463|gb|AAN37006.1| structure specific recognition protein [Plasmodium falciparum 3D7]
Length = 506
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 246/440 (55%), Gaps = 22/440 (5%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS-----LHRFA 75
G +++++ + +KNKKT V Q D+D W K R+ LK G + F
Sbjct: 28 GSFRMSNEFLGWKNKKTNNVYQYKCSDIDEGCWIK-TSYNNNRLHLKLGESKENIIIYFD 86
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
GF + +++I F+ F I + ++++ +GWNWG K + L FD++N AF +P +
Sbjct: 87 GFPDRNVNEITQHFQKYFNIRLNNRKIATKGWNWGEFKLENSNLCFDIDNKYAFNLPTNN 146
Query: 136 VSQCTTG-KNEVTVEFHPNDEAA-----ESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQ 189
++Q K ++ +EF NDE + L E+RFY P + + K+ ++ +
Sbjct: 147 INQLNVQIKTDIAMEF-KNDENNNKGNEDFLAEIRFYYPHEN--DENQNFQNLKNDLLEK 203
Query: 190 ASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHK 249
++ + ++IA + I L PRGRYDI++++S F+LHGK++D+ I + + +M +P
Sbjct: 204 VNIGDTKSESIASLSNIPLLVPRGRYDIEMYSSTFKLHGKSYDFNIQYTNINKMILVPKS 263
Query: 250 DGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSG 309
+ Q + SL +KQGQT Y F+ + N D+ E+++ S+ E+ KY KL+K +SG
Sbjct: 264 NSNQYVLIFSLSNKMKQGQTEYPFILIQLNNDDDMELDISASD-EVMTKY--KLEKTISG 320
Query: 310 PTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIH 369
++V+ K+ +VN+ + VPG +R +TCSY+AA+G +YPL + F+FI KP I
Sbjct: 321 KAHDVVTKLFTALVNKNVIVPGDYRTSKNQHGITCSYRAASGQLYPLNKYFLFIVKPVIL 380
Query: 370 IRFEEIATVNFARSG--GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVK 427
I F++I T++F R+G R F I+ K G+ + +++I+K EY L F++ K + ++
Sbjct: 381 ISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGMSYEYTNIDKSEYNPLLTFLKSKNINIQ 440
Query: 428 NTGKGEKPNYKEDFGSSDDE 447
+ + K+DF + DE
Sbjct: 441 DDANDLEK--KQDFHNELDE 458
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 214/403 (53%), Gaps = 41/403 (10%)
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTT----- 127
RF GF T+ + + + F + + +S G +WG T L F N
Sbjct: 85 RFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADED 144
Query: 128 -----------AFEIPLRDVSQCT---TGKNEVTVEFHPND---EAAESLIEMRFYIPTN 170
+ L +VSQC +NE+ ++F +D + L+ +RFY+P +
Sbjct: 145 GQEFEPRDGDEMMSLDLGEVSQCVLPGNNRNEIEMQFLESDTVEAGTDQLVALRFYVPPD 204
Query: 171 EIAGDTD-----PVEAFKDSVMNQASVINATGDAIAVFNEIQ--CLTPRGRYDIKIFNSF 223
A TD EA + +M ASV +G IA F+E + LTPRGRY I++++SF
Sbjct: 205 ADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSF 264
Query: 224 FQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDET 283
+L G +DYKI + R+F LP +D FVI+LD PI+QGQ RY+ L + + E
Sbjct: 265 LRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTK-EH 323
Query: 284 SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVT 343
SE+ + E L+++Y G++++ ++G ++AK KVI +K+ +PG F + V
Sbjct: 324 SELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVK 383
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV 400
C+ +A G++YPLE+ FIFIHKP + IRF+EI +V F R GSTR+FD + L S
Sbjct: 384 CALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGSTRNFDLCVSLHSTP 443
Query: 401 L-------HTFSSIEKEEYGKLFDFIREKKLRVKNT-GKGEKP 435
+TFS I+K Y L+ F+ KK+++KN G GE+P
Sbjct: 444 GDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEP 486
>gi|291228966|ref|XP_002734443.1| PREDICTED: structure specific recognition protein 1-like
[Saccoglossus kowalevskii]
Length = 226
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 2/220 (0%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M EALEF +++ E +G + G+LK++ Q +VFKNKKTG VEQ+ D++ W +
Sbjct: 1 MAEALEFNDIAQEIKGTMNGGRLKLSKQGVVFKNKKTGVVEQVQATDMEKTKWLRAARGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L++ +KNGS+ R+ GFKE + +++ + + N+ + + E ELS++GWNWG T+F G+ +S
Sbjct: 61 ELKLVMKNGSIFRYDGFKEGDYERLSDYIRKNYDLSLDEVELSLKGWNWGTTQFRGSEMS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F+V+N AF IPL +VS TT KNEVTVEFH ND+A SL+EMRF++PT + D DPVE
Sbjct: 121 FEVDNKAAFHIPLNNVSHSTTTKNEVTVEFHQNDDADVSLMEMRFFLPTTD--PDVDPVE 178
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIF 220
F V+ +A +I ATGDAIA F EI CLTPRGRYDIKI+
Sbjct: 179 DFHQKVLAKADIIQATGDAIATFTEIPCLTPRGRYDIKIY 218
>gi|154279964|ref|XP_001540795.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412738|gb|EDN08125.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 238/471 (50%), Gaps = 85/471 (18%)
Query: 89 FKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVT 147
FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S GKNEV
Sbjct: 82 FKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTNLAGKNEVA 141
Query: 148 VEFH-PNDEAA---------------------ESLIEMRFYIPTNEI------------- 172
VEF P D + + L+EMRFYIP +
Sbjct: 142 VEFSLPADGVSGTNGQSEGSTKNRGRKAGAGRDELVEMRFYIPGTALKKEKPEGEEDENG 201
Query: 173 -----AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
A + + F +++M++A + + GD A F ++ LTPRGR+DI ++ S F+L
Sbjct: 202 VDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLR 261
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL + D+ ++
Sbjct: 262 GKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQLKLDDEISID 321
Query: 288 LPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSY 346
L +++ L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F H G S V CS
Sbjct: 322 LNMTDELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHHGHSGVKCSI 381
Query: 347 KAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-H 402
KA G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD + LK G+ H
Sbjct: 382 KANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMTLKGGMGEH 441
Query: 403 TFSSIEKEEY----GKLF-DFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARV 457
FS+I + ++ +F +F + K +R KN +DD A +A
Sbjct: 442 QFSNINRYKHSTTQAPVFEEFFKAKNIRFKNE-------------MADDS---SALIA-- 483
Query: 458 KREAAERDDEDDEDEDESTDEDFNP-------------DQAESDVAEEYDS 495
AA +DE DED + D ++ESDVAEEYDS
Sbjct: 484 ---AALDNDEGSSDEDVAVGNDRGSADEDEESVDEDFQAESESDVAEEYDS 531
>gi|341888649|gb|EGT44584.1| hypothetical protein CAEBREN_28220 [Caenorhabditis brenneri]
Length = 292
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 177/289 (61%), Gaps = 1/289 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
LE V E G L PG K + FK + K ++ D+D V +QKL +R
Sbjct: 4 LEITGVFIENVGVLTPGTFKFDIDSFSFKGDRGKKSVKVQTHDIDEVRFQKLGNKPGIRF 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
L +G HRF GFK+T+++ I F KT++++++ EL ++GWN+G G + F
Sbjct: 64 ALLDGGAHRFGGFKDTDLENIKEFVKTHWQMEIHNTELFIKGWNYGQANVKGKNIEFAWE 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGD-TDPVEAFK 183
NT FEIP +VSQC KNE +EFH N+ + SL+EMRF++P + D D VE FK
Sbjct: 124 NTPIFEIPCTNVSQCVANKNEAVLEFHQNENSQVSLMEMRFHMPVDPDDEDEIDKVEEFK 183
Query: 184 DSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRM 243
+V+ A + T I + ++I C TPRGRY+IK++ + LHGKT+DYKIP+ T+ R+
Sbjct: 184 KAVLAYAGLEAETEQPITLLSDILCTTPRGRYEIKVYPTSIALHGKTYDYKIPVKTINRL 243
Query: 244 FTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSE 292
F +PHKDGR +FV+SL+PPI+QGQTRY +L F +++ ++EL +E
Sbjct: 244 FLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLVFEFLKEDEQDLELAITE 292
>gi|84996169|ref|XP_952806.1| structure-specific recognition protein (SSRP) 1 [Theileria annulata
strain Ankara]
gi|65303804|emb|CAI76181.1| structure-specific recognition protein (SSRP) 1, putative
[Theileria annulata]
Length = 490
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 242/444 (54%), Gaps = 30/444 (6%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKL-VGTWALRIFL---KNGSLHRFAG 76
G K++++ +KNK+TG+V Q D+ + + K + LRI L K + RF G
Sbjct: 22 GAFKVSNELFGWKNKRTGEVLQHRSSDVSSITFVKTNSNLYQLRIELNESKQFKVLRFDG 81
Query: 77 FKE---------TEIDKICSF-----FKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFD 122
F E ID I F+ N+K+ + E+S GW+WG +F
Sbjct: 82 FTEKVHIIITHQIYIDTINVLDLSKHFEENYKMSCDKDEVSCTGWHWGTYEFDNTTFRLR 141
Query: 123 VNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAES--LIEMRFYIPTNEIAGDTDP- 178
+NN + EI + + Q T K ++ +E + S L+E+RF +P+ D +
Sbjct: 142 INNNSGLEIDAQSIIQATIPSKTDLAIELKNANPLNNSDDLVEIRFCVPSKLDPEDAEIK 201
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
+E K + + ++ + + IA+ +I + PRGRY+I+ +LHGK++DY + +
Sbjct: 202 LEDLKQTFLVKSGLDEMKSEKIALLMDIPLIVPRGRYEIEFTKRSIKLHGKSYDYTLLFT 261
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
++RMF LP + F++ L ++QGQTRY ++ + F D ++++L + +LK+
Sbjct: 262 NIIRMFLLPKPNSPYINFILGLSQSMRQGQTRYAYIVMQFESDHETKVDLNLQDNDLKQY 321
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLER 358
KLDK L G TY V++++ +VNR I VPG F+ G SA++C+YKA +G+++PL R
Sbjct: 322 ---KLDKVLEGKTYNVVSRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHLFPLNR 378
Query: 359 GFIFIHKPPIHIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLF 416
+FI KP I IRFE+I +V F+R+G T R F + ++ G+ + F++I+K E+ L
Sbjct: 379 SLLFIVKPVIFIRFEDIVSVEFSRTGVVTQNRFFAILVSMRGGIEYEFTNIDKTEFKNLN 438
Query: 417 DFIREKKLRVKN---TGKGEKPNY 437
+++ K ++VK T + E+ NY
Sbjct: 439 EYLMTKDIKVKTSEETERVEQTNY 462
>gi|296811248|ref|XP_002845962.1| FACT complex subunit pob3 [Arthroderma otae CBS 113480]
gi|238843350|gb|EEQ33012.1| FACT complex subunit pob3 [Arthroderma otae CBS 113480]
Length = 568
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 266/553 (48%), Gaps = 105/553 (18%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK ++ + + +K G ++ ++ W + + L+IF + + + GF++
Sbjct: 70 GKCRLAESGMGWKPSGGGDTFTLDKSNIGAAEWSRAAKGYELKIFSRTCGVIQLDGFEQD 129
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ D+ FK + +++ +E ++RGWNWG +F + LSF+V N AFE+P ++S
Sbjct: 130 DFDRAAKAFKIWYGVNLTNREHALRGWNWGKAEFGKSELSFNVQNRPAFEVPYSEISNTN 189
Query: 141 -TGKNEVTVEFH-PNDEAA---------------------ESLIEMRFYIPT-------- 169
G+NEV VEF P D+AA + L+EMRFYIP
Sbjct: 190 LAGRNEVAVEFFLPTDDAASVKEQPAGSTKNRGRKAGLGRDELVEMRFYIPGTVSKKEEG 249
Query: 170 -----NEIAGDTDPVE------AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIK 218
N+ A D + VE F +++M++A + + GD A F ++ LTPRGR+D+
Sbjct: 250 EEGEDNKSADDEEEVEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDMD 309
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
++ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL
Sbjct: 310 MYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLV--- 366
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTG 338
M+L KLD E+S + +N
Sbjct: 367 -------MQL-------------KLDDEIS------------IDLNM------------- 381
Query: 339 TSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIE 395
T V CS KA G ++ L++ F+F+ KP +I+ E I+ + +R GG ++R+FD +
Sbjct: 382 TDGVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENISVITMSRVGGTVSASRTFDITMT 441
Query: 396 LKSGVL-HTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYL 454
LK G H FS+I +EE L DF + K +R KN E +D +
Sbjct: 442 LKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVEEASTLIATALENDQMMDSSDDD 501
Query: 455 ARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPT--DSDE---DSDAS 509
A V + D ++ ES DEDF D ++S+VAEE+DS + DSDE D+D
Sbjct: 502 ADV-----QEDRGSAAEDSESPDEDFVGD-SDSEVAEEFDSEHASSSGDSDEEMDDADND 555
Query: 510 EGTKKKKKEKSRK 522
E + KKK K +K
Sbjct: 556 EDERPKKKSKVQK 568
>gi|392579935|gb|EIW73062.1| hypothetical protein TREMEDRAFT_14396, partial [Tremella
mesenterica DSM 1558]
Length = 420
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 221/411 (53%), Gaps = 39/411 (9%)
Query: 55 KLVGTWALRIFLKNGSLHR--FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
++ + LRI L+ R F GF + DKI + I + K+ +++G+NWG
Sbjct: 8 RVARNFQLRISLRLPDTPRVTFDGFPRDDHDKIKRTLDDYYNIKLETKDPALKGYNWGKV 67
Query: 113 KFIGNVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP----------NDEAAESLI 161
+ + + F V N TAFEIPL V+ GKNEV++EF P + + + ++
Sbjct: 68 NVLNHDIEFSVQNKTAFEIPLSAVANSNVAGKNEVSLEFAPPAFKKDPKNLSLKPMDEMV 127
Query: 162 EMRFYIPTNEI------AGDTD--------------PVEAFKDSVMNQASVINATGDAIA 201
E+RFY+P + AG D +A ++ +A + GD+I
Sbjct: 128 EIRFYVPGKSVKPRGSDAGSDDESEVELDEDGNEITAAQALHSAIAEKADIGEVVGDSIV 187
Query: 202 VFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLD 261
F+++ LTPRGRY + + +L GK+ DY++P ++V R+F LP D VI LD
Sbjct: 188 SFSDVLILTPRGRYTLDFYPDSVRLLGKSTDYRVPFTSVRRLFLLPKLDDLHVQLVIGLD 247
Query: 262 PPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKV 321
PPI+QG TRY FL L + +DE + EL +++EL + L K+ P++ V+++++K
Sbjct: 248 PPIRQGATRYPFLVLQWPKDEEVDAELAMTDEELANYPD--LKKKYDAPSFTVISQVIKS 305
Query: 322 IVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
+++T PGSFR G + + + KA G +Y L++G IFI K PI I F + T++F+
Sbjct: 306 FTGKRVTPPGSFRNAQGLNGIKANVKAVQGELYFLDKGLIFIAKQPILIDFSKTETISFS 365
Query: 382 RSGG---STRSFDFEIELKS-GVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
R GG S R+FD + ++ G FSSI KEE + F++EK +RVK+
Sbjct: 366 RVGGGIASARTFDMRVVSRAEGTDIIFSSINKEESAHITAFLKEKGVRVKD 416
>gi|156100499|ref|XP_001615977.1| structure specific recognition protein [Plasmodium vivax Sal-1]
gi|148804851|gb|EDL46250.1| structure specific recognition protein, putative [Plasmodium vivax]
Length = 504
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 241/439 (54%), Gaps = 21/439 (4%)
Query: 16 GALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-----NGS 70
G G +++++ + +KNKKT V Q D+ W K R+ LK +
Sbjct: 23 GGCDYGSFRMSNEFLGWKNKKTNSVYQYKCSDISEAEWIK-TSYNNNRLHLKFSEQKDNL 81
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ F GF + +I F+ F + + ++L+ RGWNWG K + ++FD++N AF
Sbjct: 82 IIFFDGFPDRNTSEITQHFQKYFNLRLASRKLATRGWNWGEFKLENSNITFDIDNKYAFT 141
Query: 131 IPLRDVSQCTTG-KNEVTVEFHPNDEAAES----LIEMRFYIPTNEIAGDTDPVEAFKDS 185
IP +SQ K ++ +E N+E ++ L E+RF P + + FK+
Sbjct: 142 IPTNSISQLNVQIKTDIAMEL-KNEENKKTNEDFLSEIRFCYPHEN--DENQNFQNFKND 198
Query: 186 VMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFT 245
++ + ++ ++ + IA I L PRGRY+I+++ F+LHGK++D+ I + + +M
Sbjct: 199 LLEKVNIGDSKSECIASLANIPLLVPRGRYEIEMYTKSFKLHGKSYDFTIQYTNINKMLL 258
Query: 246 LPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDK 305
+P + Q + SL+ +KQGQT Y F+ + N D+ E+++ SE++LK KY KL+K
Sbjct: 259 VPKSNSNQYVLIFSLNNKMKQGQTEYPFILIQLNNDDDMELDINASEEDLK-KY--KLEK 315
Query: 306 ELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHK 365
LSG Y+V+ ++ +V + +PG +R +TCSY+AA+G +YPL + F+FI K
Sbjct: 316 SLSGKAYDVVTRLFTALVKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFIIK 375
Query: 366 PPIHIRFEEIATVNFARSG--GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKK 423
P I I F++I T++F R+G R F I+ K G+ + +++I+K EY L +F++ K
Sbjct: 376 PVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGMSYEYTNIDKSEYLPLLEFLKSKN 435
Query: 424 LRVKNTGKGEKPNYKEDFG 442
+ +++ + K+DFG
Sbjct: 436 IHIQD--DANVADKKQDFG 452
>gi|209878187|ref|XP_002140535.1| FACT complex subunit SSRP1 [Cryptosporidium muris RN66]
gi|209556141|gb|EEA06186.1| FACT complex subunit SSRP1, putative [Cryptosporidium muris RN66]
Length = 538
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 266/513 (51%), Gaps = 37/513 (7%)
Query: 32 FKNKKTGKVEQINGPDLDFVNWQKLVG----TWALRIFLK-NGSLHRFAGFKETEIDKIC 86
+KN++T ++ V W + VG + LR+FLK F GF+ + I
Sbjct: 33 WKNRRTNATYHYKPDEISAVQWIR-VGNEDNSHQLRLFLKEKKDCIYFTGFRSLDFPIIE 91
Query: 87 SFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNE 145
FKT + I + E ++ +G NWG + ++ IP ++Q K+E
Sbjct: 92 KHFKTYYNIIIKEFSVNTQGSNWGNAIIENDTFCIKNDDKILMYIPTTQINQIALPSKSE 151
Query: 146 VTVEFHPNDEAAES---LIEMRFYIPT---NEIAGDTDPVEAFKDSVMNQASVINATG-- 197
+ +EF + E+ L+E+RF+IP NE ++ VE + NQ ++++ G
Sbjct: 152 MVLEFSGETNSEENDDKLVEIRFFIPNIDQNE-TDNSSKVELLR----NQLTLLSGIGSS 206
Query: 198 ---DAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQN 254
D + +N+I + PRGRY+I++ + +LHGK+FDY I ++ RMF LP
Sbjct: 207 GSVDKVCRWNDIHLIVPRGRYEIEVLVNSMKLHGKSFDYTILYQSISRMFLLPRPGVTHI 266
Query: 255 FFVISLDPPIKQGQTRYHFLTLLFN--QDETSEMELPFSEQELKEKYEGKLDKELSGPTY 312
VI+L+ P++QG T+Y F+ + F+ QDE E+ L SE+E+ +++ G L + G +
Sbjct: 267 NLVIALETPVRQGNTKYPFIVIQFDTQQDEDIEIPLNLSEKEI-QRFNG-LSTVMVGRFW 324
Query: 313 EVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRF 372
+++ +I K + R I VPG FR + + CS+KA G +YPL R FIFI KP I IR+
Sbjct: 325 DIVTRIFKALTGRPIVVPGDFRSASSYHCIRCSFKAQDGLLYPLNRSFIFITKPVIMIRY 384
Query: 373 EEIATVNFAR-SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGK 431
+EI + F+R SG TR F+ + +K G ++F+SI+K EY L F++EK +R++N +
Sbjct: 385 DEILNIEFSRMSGNQTRFFELFVTIKGGGDYSFTSIDKAEYNPLIKFLQEKNIRIRNLQE 444
Query: 432 GEKPNYKEDFGSSDDEKEPDAYLARV-------KREAAERDDEDDEDEDESTDEDFNPDQ 484
N + GSS + K + +V + + D E++E+ D S D D + D
Sbjct: 445 AIDNNSRRK-GSSRESKISNKSQTQVILGQDLPSDDEDDEDFENNEETDSSEDSDLSEDS 503
Query: 485 AESDVAEEYDSNPTPTDSD-EDSDASEGTKKKK 516
S+ E+ S DS SD S KKKK
Sbjct: 504 GSSEGDEDSLSGQEDVDSQGYSSDESLSPKKKK 536
>gi|323450291|gb|EGB06173.1| hypothetical protein AURANDRAFT_72060 [Aureococcus anophagefferens]
Length = 667
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 318/652 (48%), Gaps = 68/652 (10%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS-LHRFAGFKE 79
G L + ++ I + NK+ GK +++ ++ +W +F +GS L + GF
Sbjct: 17 GSLSVGEE-IKWFNKQEGKSKKVKAAEVSRASWSTFGKHGCATLFGADGSELLKLDGFAR 75
Query: 80 TEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKF-IGNVLSFDVNNTTA---------- 128
+ + + K + + + E G N G F G L V + TA
Sbjct: 76 RDQETLGGALKDQ-GVALSDVEFCSSGVNRGKHSFEDGQRL---VVHQTAPGEGKEPKRL 131
Query: 129 FEIPLRDVSQCT----TGKN-----EVTVEFHPNDEAA---ESLIEMRFYIPTNE----- 171
F+I L VSQC GK EVT++F +D+AA L+E+R YIP
Sbjct: 132 FDIDLSKVSQCVLPAGVGKQAGEQKEVTMQF--DDKAAPDDHQLVELRLYIPPGSRSYAE 189
Query: 172 ----IAGDTDPVEAFKDSVMNQASVINATGDAIAVFN--EIQCLTPRGRYDIKIFNSFFQ 225
D +M + + + TG +A F + L PRGRY ++++ FF+
Sbjct: 190 DEEEDDDDAGEAARVHAKIMEYSKLTSVTGTQLAQFGAEDGAFLLPRGRYAVEMYGDFFR 249
Query: 226 LHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSE 285
+HG +DYKI + V R LP D F+I+LD PI+QGQ RY L + + +
Sbjct: 250 MHGNMYDYKINFADVERFILLPRTDDVHYAFIIALDKPIRQGQQRYGHLVWQLKKGDKA- 308
Query: 286 MELPFSEQELKEKYEGK--LDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVT 343
+ + SE EL E+Y L EL+GP Y+++A++ KV+ +K+ G FR + AV
Sbjct: 309 ITVNLSEAELSERYGAGSGLKPELAGPLYQLVARVFKVLSGKKVFTTGKFRSNDDRHAVN 368
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR-----SGGSTRSFDFEIELKS 398
CS KA+ G +YPLER F+F+HKP + +RFE++A+V F R G +T++FD ++ ++S
Sbjct: 369 CSVKASTGQLYPLERSFVFVHKPTLVLRFEDVASVEFERFSGYGQGSATKNFDLKVSMRS 428
Query: 399 GVL-----HTFSSIEKEEYGKLFDFIREKKLRVKN---TGKGEKPNYKEDFGSSDDEKEP 450
H+F+SIE+ EY L +F+ K L+++N T KE G D+ +
Sbjct: 429 VGGDPPKDHSFTSIERAEYKPLLEFLTSKGLKIRNLQETAARATNAAKEALGIGSDDDD- 487
Query: 451 DAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASE 510
AA D +DED S DED+ + A + +++ D + + SD E
Sbjct: 488 ----DDDAAPAARGGDSNDED---SPDEDY--EDAGAPASDDDDDDDDDDGDGDGSDDDE 538
Query: 511 GTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMRE 570
K KK K K RK++ KE + KRKKKD NAPK SAY+M+ N R
Sbjct: 539 APKIAKKPKKEAAAEPKPKKRKAEPKKEKAEPKKKRKKKDPNAPKGKSSAYIMFGNAKRA 598
Query: 571 KIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
++K+ +P S +I ++ G+ WK ++ +K Y + E Y+ + AYK
Sbjct: 599 EVKEQHPDFSLGDIGRELGKRWKELTDDDKKPYVDLATADAERYDREMAAYK 650
>gi|429856407|gb|ELA31316.1| structure-specific recognition protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 547
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 228/449 (50%), Gaps = 62/449 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK + + + +K G ++ ++ +W + + ++I ++ + + GF++
Sbjct: 20 GKCRFAESGLGWKPAGGGDTFTLDHSNIASAHWSRAAKGYEIKILNRDSRIIQLDGFQQE 79
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQC- 139
+ +++ FK+ + ++ KE S+RGWNWG F L+F V N AFEIP ++S
Sbjct: 80 DYERLSKIFKSWYSTNLENKEHSLRGWNWGKADFGKAELAFHVQNRPAFEIPYSEISNTN 139
Query: 140 TTGKNEVTVEFH-PNDE---------------------AAESLIEMRFYIPTN---EIAG 174
G+NEV VEF P D+ + L+EMRFYIP E G
Sbjct: 140 LAGRNEVAVEFSAPTDKNDTGTNGALGGARGKGKKAGAGKDQLVEMRFYIPGTVKKEADG 199
Query: 175 ----------DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFF 224
+ + V F D++M +A + GD IA F +I LTPRGR+DI ++++ F
Sbjct: 200 EDGTSDAGEEEKNAVALFYDTLMEKAEIGETAGDTIATFLDILHLTPRGRFDIDMYDASF 259
Query: 225 QLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETS 284
+L GKT+DYKI + + LP D LLF +DE
Sbjct: 260 RLRGKTYDYKIQYDAIKKFMVLPKPDETH---------------------VLLFKKDEEV 298
Query: 285 EMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVT 343
++L +E+++ E+Y+ +L P ++V+ I + + N+K+T P F+ H +
Sbjct: 299 TIDLNLTEEQIDERYKDRLQPHYEQPLHQVITYIFRGLANKKVTTPAKDFQTHRQQFGIK 358
Query: 344 CSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGV 400
CS KA+ G++Y LE+ F+F+ KP +I +E+ A+V F+R GG+ + FD +++K+G
Sbjct: 359 CSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASVTFSRVGGAVSALSTFDITVQMKNGA 418
Query: 401 LHT-FSSIEKEEYGKLFDFIREKKLRVKN 428
+ FS+I +E+ L +F R K LRVKN
Sbjct: 419 GSSQFSNINREDLKGLEEFFRLKGLRVKN 447
>gi|401881111|gb|EJT45416.1| subunit of the heterodimeric FACT complex, Pob3p [Trichosporon
asahii var. asahii CBS 2479]
Length = 551
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 196/343 (57%), Gaps = 32/343 (9%)
Query: 117 NVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHP------NDEAAESLIEMRFYIP- 168
N L+F+V + TAFE+PL V+ GKNEV++EF P N + L+E+RFY+P
Sbjct: 86 NDLAFEVQHKTAFELPLSQVANSNIAGKNEVSIEFMPKTFEGNNARDPDELVEIRFYVPG 145
Query: 169 -------------------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCL 209
+E + EA + + ++A + A GD+I VF E+ L
Sbjct: 146 KSKKPKGSDAGSDEEPETDVDEEGNEISAAEAMHNMIKDKADIGAAVGDSIVVFEEVLVL 205
Query: 210 TPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQT 269
TPRGR+ ++ F+ +L GK+ DY++P S++ R+F LP D V+ LDPPI+QG T
Sbjct: 206 TPRGRFSLEFFHESLRLLGKSTDYRVPFSSINRIFLLPKLDDLHIQLVLGLDPPIRQGAT 265
Query: 270 RYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITV 329
RY FL + +DE + EL ++E+ KY K+ PT++V+++++K + +K+T
Sbjct: 266 RYLFLVAQWPKDEEVDAELNLDDEEIA-KYPDLQKKKYEAPTFQVISRVLKSLTGKKVTP 324
Query: 330 PGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---S 386
PG+FR G + + + KA G +Y LE+G IFI K PI I F + +++F+R GG S
Sbjct: 325 PGNFRNAQGVNGIKANVKAVQGELYFLEKGLIFIAKQPILIDFSKTESISFSRVGGGVAS 384
Query: 387 TRSFDFEIELKSGVLHT-FSSIEKEEYGKLFDFIREKKLRVKN 428
R+FD + K+G + T FS+I KEE G + F+ K +R+KN
Sbjct: 385 ARTFDMRVTSKTGTVPTVFSAISKEEAGPISQFLASKNVRLKN 427
>gi|66363410|ref|XP_628671.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) [Cryptosporidium
parvum Iowa II]
gi|46229663|gb|EAK90481.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) [Cryptosporidium
parvum Iowa II]
Length = 523
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 232/414 (56%), Gaps = 21/414 (5%)
Query: 32 FKNKKTGKVEQINGPDLDFVNWQKLV---GTWALRIFL--KNGSLHRFAGFKETEIDKIC 86
+KN++T ++ V W + + LR+F+ K +H F GFK + I
Sbjct: 33 WKNRRTNATYHYKPEEVMGVEWIQTSCEDSSCQLRVFIREKKDCIH-FTGFKTEDYSVIK 91
Query: 87 SFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNE 145
S F+T + I++ KEL+ +G NWG + + +P +++Q K+E
Sbjct: 92 SHFETYYGINLETKELNTKGINWGDLTIHNDTICIGNEGKVMMYVPSININQIAMPSKSE 151
Query: 146 VTVEFHPNDEAAE---SLIEMRFYIPTNEIAGDTDPV---EAFKDSVMNQASVINATG-- 197
+ +EF+ A E L+E+R ++P E + D + + E + ++ + + I ++G
Sbjct: 152 LVLEFNEGVNAGEDCDELMEIRLFVPNQENSLDGNSLSSAEKLRSDLL-KLTGIGSSGSM 210
Query: 198 DAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFV 257
D + +N+I L PRGRY+I++ + +LHGK+FDY I ++ R+F LP V
Sbjct: 211 DKVCRWNDIHLLVPRGRYEIEVLVNCLKLHGKSFDYTILFQSISRLFLLPRPGTSLVNLV 270
Query: 258 ISLDPPIKQGQTRYHFLTLLFN--QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVM 315
++L+ P++QG T+Y F+ + F+ QDE EM L SE+E+ +++ G L ++G ++++
Sbjct: 271 VALETPMRQGNTKYPFVVMQFDTQQDENIEMPLNLSEKEI-QRFTG-LSPIMTGKFWDIV 328
Query: 316 AKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEI 375
+I+K + I VPG FR + + CSYKA G +YPL R FIFI KP I IRF++I
Sbjct: 329 TRILKSLTGHSIIVPGDFRSASMYHCIRCSYKAQDGLLYPLNRSFIFITKPVILIRFDDI 388
Query: 376 ATVNFARSGGS-TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+ F+R GG+ TR F+ I ++ G ++F+SI+K EY L F++EK +R+KN
Sbjct: 389 LNIEFSRMGGNQTRFFELTITIRGGGDYSFTSIDKAEYNPLIKFLQEKNIRIKN 442
>gi|67603802|ref|XP_666578.1| structure specific recognition protein [Cryptosporidium hominis
TU502]
gi|54657597|gb|EAL36346.1| structure specific recognition protein [Cryptosporidium hominis]
Length = 514
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 232/414 (56%), Gaps = 21/414 (5%)
Query: 32 FKNKKTGKVEQINGPDLDFVNWQKLV---GTWALRIFL--KNGSLHRFAGFKETEIDKIC 86
+KN++T ++ V W + + LR+F+ K +H F GFK + I
Sbjct: 24 WKNRRTNATYHYKPEEVMGVEWIQTSCEDSSCQLRVFIREKFVCIH-FTGFKTEDYSVIK 82
Query: 87 SFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNE 145
S F+T + I++ KEL+ +G NWG + + +P +++Q K+E
Sbjct: 83 SHFETYYGINLETKELNTKGINWGDLTIHNDTICIGNEGKVMMYVPSVNINQIAMPSKSE 142
Query: 146 VTVEFHPNDEAAE---SLIEMRFYIPTNEIAGDTDPV---EAFKDSVMNQASVINATG-- 197
+ +EF+ A E L+E+R ++P E + D + + E + ++ + + I ++G
Sbjct: 143 LVLEFNEGVNAGEDCDELMEIRLFVPNQENSLDGNSLSSAEKLRSDLL-KLTGIGSSGSM 201
Query: 198 DAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFV 257
D + +N+I L PRGRY+I++ + +LHGK+FDY I ++ R+F LP V
Sbjct: 202 DKVCRWNDIHLLVPRGRYEIEVLVNCLKLHGKSFDYTILFQSISRLFLLPRPGTSLVNLV 261
Query: 258 ISLDPPIKQGQTRYHFLTLLFN--QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVM 315
I+L+ P++QG T+Y F+ + F+ QDE EM L SE+E+ +++ G L ++G ++++
Sbjct: 262 IALETPMRQGNTKYPFVVMQFDTQQDENIEMPLNLSEKEI-QRFTG-LSPIMTGKFWDIV 319
Query: 316 AKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEI 375
+I+K + I VPG FR + + CSYKA G +YPL R FIFI KP I IRF++I
Sbjct: 320 TRILKSLTGHSIIVPGDFRSASMYHCIRCSYKAQDGLLYPLNRSFIFITKPVILIRFDDI 379
Query: 376 ATVNFARSGGS-TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+ F+R GG+ TR F+ I ++ G ++F+SI+K EY L F++EK +R+KN
Sbjct: 380 LNIEFSRMGGNQTRFFELTITIRGGGDYSFTSIDKAEYNPLIKFLQEKNIRIKN 433
>gi|406697061|gb|EKD00330.1| subunit of the heterodimeric FACT complex, Pob3p [Trichosporon
asahii var. asahii CBS 8904]
Length = 550
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 196/343 (57%), Gaps = 33/343 (9%)
Query: 117 NVLSFDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHPNDEAAES------LIEMRFYIP- 168
N L+F+V + TAFE+PL V+ GKNEV++EF P S L+E+RFY+P
Sbjct: 86 NDLAFEVQHKTAFELPLSQVANSNIAGKNEVSIEFMPKTFEGNSARDPDELVEIRFYVPG 145
Query: 169 -------------------TNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCL 209
+E + EA + + ++A + A GD+I VF E+ L
Sbjct: 146 KSKKPKGSDAGSDEEPETDVDEEGNEISAAEAMHNMIKDKADIGAAVGDSIVVFEEVLVL 205
Query: 210 TPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQT 269
TPRGR+ ++ F+ +L GK+ DY++P S++ R+F LP D V+ LDPPI+QG T
Sbjct: 206 TPRGRFSLEFFHESLRLLGKSTDYRVPFSSINRIFLLPKLDDLHIQLVLGLDPPIRQGAT 265
Query: 270 RYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITV 329
RY FL + +DE + EL ++E+ KY L K+ PT++V+++++K + +K+T
Sbjct: 266 RYPFLVAQWPKDEEVDAELNLDDEEIA-KYP-DLQKKYEAPTFQVISRVLKSLTGKKVTP 323
Query: 330 PGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---S 386
PG+FR G + + + KA G +Y LE+G IFI K PI I F + +++F+R GG S
Sbjct: 324 PGNFRNAQGVNGIKANVKAVQGELYFLEKGLIFIAKQPILIDFSKTESISFSRVGGGVAS 383
Query: 387 TRSFDFEIELKSGVLHT-FSSIEKEEYGKLFDFIREKKLRVKN 428
R+FD + K+G + T FS+I KEE G + F+ K +R+KN
Sbjct: 384 ARTFDMRVTSKTGTVPTVFSAISKEEAGPISQFLASKNVRLKN 426
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 292/600 (48%), Gaps = 65/600 (10%)
Query: 47 DLDFVNWQKLVG--TWALRIFLKNGSLHRFA--GFKETEIDKICSFFKTNFK-IDVPEKE 101
D+ +N+ ++ G LR+ GS GF+ ++ + F F+ + V ++E
Sbjct: 68 DIKEINYSQVPGGVQVLLRVKPDKGSAKTIVLQGFRGADVKPLKEFVAAQFENVRVRQRE 127
Query: 102 LSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE----A 156
G NWG + F+VN +FE+ ++ GKN++ VE E +
Sbjct: 128 CQPNGRNWGDIVVSNSNFKFEVNEKCSFEVNANAIAGVNPIGKNDLIVEMQQGKENEKQS 187
Query: 157 AESLIEMRFYIPTNE--IAGDTDPV------EAFKDSVMNQASVINATGDAIAVFNEIQC 208
++L+EM FY+P AG+ + ++ A+ A G+ + F +
Sbjct: 188 KDALVEMAFYVPLTAETWAGEDVDDADDMAVQRLATAIDAIAATGPALGEPVCAFEDANL 247
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
+ PRG+ + +F ++ G D+KI ++VLR++ LP + Q V++LDPPI++GQ
Sbjct: 248 VVPRGKVTFALHPNFVRVTGSAADFKINYTSVLRVYALPKPNAHQTHVVVALDPPIRKGQ 307
Query: 269 TRYHFLTLLFNQD------------ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMA 316
T Y F+ +FN D ET ++E+ E++E+++ +++E +G EV A
Sbjct: 308 TFYSFIVTVFNDDDIITVAPRKPNKETDDIEI---TGEMEERFKA-VEEEYTGAAGEVFA 363
Query: 317 KIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIA 376
+++K + K+T G+F G +A+ S+KA G +Y LERGF ++ KPPI +R+E+++
Sbjct: 364 RVLKAVAGVKLTRQGTFVSPAGGAAIRVSHKADVGLLYLLERGFFYLPKPPILVRYEDVS 423
Query: 377 TVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGE 433
F R GG ++++FD + K G+ + F I + E+ L +F+ T KG
Sbjct: 424 ECEFERHGGGAGASKTFDLTLTTKKGLSYQFHGISRTEFQNLVNFL---------TAKGL 474
Query: 434 KPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEY 493
G D D + DEDD + D E + +EE
Sbjct: 475 P------MGEVDANALADRLI-----------DEDDMAGIDDAGPDLERGSDEDEDSEED 517
Query: 494 DSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGG--STKRKKKDK 551
+ +DSD + + + +K KK K +SG + K+K+KD
Sbjct: 518 EDFKGASDSDGGEPTDSSSSESDSDSDSDGGGGKKKKPAKKKAKTNSGSPHAKKKKEKDP 577
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P+S YM++ +MR K+K++NP S T++AK+ G WK+V+ +EK +Y+E K K
Sbjct: 578 NAPKRPLSTYMIFSAEMRAKVKEENPDFSITDVAKELGVRWKSVTDEEKVKYEELAKKDK 637
>gi|221059627|ref|XP_002260459.1| structure specific recognition protein [Plasmodium knowlesi strain
H]
gi|193810532|emb|CAQ41726.1| structure specific recognition protein,putative [Plasmodium
knowlesi strain H]
Length = 505
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 237/438 (54%), Gaps = 19/438 (4%)
Query: 16 GALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-----NGS 70
G G +++++ + +KNK+T V Q D+ W K G R+ +K +
Sbjct: 23 GGCDYGSFRMSNEFLGWKNKQTNSVYQYKCSDISEAEWIK-TGYNNNRLHIKFNKQKDNL 81
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ F GF + I +I F+ F + + ++++ +GWNWG K ++FD++N AF
Sbjct: 82 IIFFDGFPDRNISEITQHFQKYFNLRLASRKIATKGWNWGEFKLENTNINFDIDNKYAFS 141
Query: 131 IPLRDVSQCTTG-KNEVTVEFHPNDEAAES---LIEMRFYIPTNEIAGDTDPVEAFKDSV 186
IP ++Q K ++ +E D + L E+RF P + + FK+ +
Sbjct: 142 IPTNSINQLNVQIKTDIAMELKNEDYKKTNEDFLSEIRFCYPHEN--DENKHFQNFKNDL 199
Query: 187 MNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTL 246
+ + ++ ++ + IA I L PRGRY+I+++ F+LHGK++D+ + + + +M +
Sbjct: 200 LEKVNIGDSKSECIASLANIPLLVPRGRYEIEMYPKSFKLHGKSYDFTVQYTNINKMLLV 259
Query: 247 PHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKE 306
P + Q + SL+ +KQGQT Y F+ + N D+ E+++ SE++LK KY KL+K
Sbjct: 260 PKSNSNQYVLIFSLNNKMKQGQTEYPFILVQLNNDDDMELDINASEEDLK-KY--KLEKS 316
Query: 307 LSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKP 366
L G YEV+ ++ +V + +PG FR +TCSY+AA+G +YPL + F+FI KP
Sbjct: 317 LCGRAYEVIPRLFSALVKKNAIIPGDFRTAKNEHGITCSYRAASGQLYPLNKYFLFIVKP 376
Query: 367 PIHIRFEEIATVNFARSG--GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKL 424
I I F++I T+ F R+G R F I+ K G+ + +++I+K EY L +F++ K +
Sbjct: 377 VILISFDDIVTLTFQRTGNINQHRFFSVIIKHKRGMSYEYTNIDKSEYLPLLEFLKSKNI 436
Query: 425 RVKNTGKGEKPNYKEDFG 442
+++ + K+DFG
Sbjct: 437 HIQD--DANVADKKQDFG 452
>gi|403337451|gb|EJY67941.1| DNA polymerase delta binding protein [Oxytricha trifallax]
Length = 561
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 201/383 (52%), Gaps = 58/383 (15%)
Query: 101 ELSVRGWNWG----GTKFIGNVLSFDVNNTTAFEIPLRDVS-QCTTGKNEVTVEF--HPN 153
+ S +GWNWG G K IG F NN A I +DV+ +G+NEVT+E H
Sbjct: 18 QYSTKGWNWGYYEIGEKHIG----FKTNNQRALVIDYKDVALSSVSGRNEVTLELQDHKK 73
Query: 154 DEAAE-----------SLIEMRFYIPTNEIAGD---------------TD---------- 177
EAAE + E+RF++P +++ + TD
Sbjct: 74 KEAAEKNQKKPDNNYDCVSEIRFFVPNSDLMANRAKEDAKKSKPKQKKTDDKGDGSEEED 133
Query: 178 ------PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
P + + ++N A + + GD IA EI PRG+Y + SF +LHG T
Sbjct: 134 DQEEFTPAQIMNEKIINAAGLSDYAGDVIASLPEITMNIPRGKYSFNFYKSFLKLHGSTN 193
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
DYKI +++ F LP DG Q +++ L P++ GQT ++FL + F++ + + +EL
Sbjct: 194 DYKIKYKDIIKGFLLPKPDGIQMAYIVQLSSPLRLGQTLHYFLAIQFDRHKEATVELNME 253
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG 351
++LKE+Y KLD L GP Y+V++K+ K I+ + I +P FR A+ CS KA+ G
Sbjct: 254 PEKLKEEYGDKLDPILEGPLYDVLSKLFKEIIKKNILIPHDFRTTKEEEALRCSVKASEG 313
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSG----GSTRSFDFEI-ELKSGVLHTFSS 406
++YPL+ IFIHKP +I+F EI + F+R G GS++SFD I + TF+
Sbjct: 314 HLYPLKSSLIFIHKPVHYIKFNEIKYIEFSRVGNSGMGSSKSFDITITRSRDDSQITFAG 373
Query: 407 IEKEEYGKLFDFIREKKLRVKNT 429
I+K E KL ++++K +RV++
Sbjct: 374 IDKTEQKKLSAYLKDKGIRVRSV 396
>gi|156088085|ref|XP_001611449.1| structure specific recognition protein [Babesia bovis T2Bo]
gi|154798703|gb|EDO07881.1| structure specific recognition protein, putative [Babesia bovis]
Length = 485
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 232/422 (54%), Gaps = 23/422 (5%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS----LHRFAG 76
G K++ + +KNK+TG+V Q DL+ ++ + G F N S + RF+G
Sbjct: 22 GAFKVSTELFGWKNKRTGEVIQHKRSDLNSISIINIGGGMYQVRFDMNASKGYEILRFSG 81
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F E +D++ F +FKI ++ GW+WG F + +++ +I +DV
Sbjct: 82 FSEKAVDELKQHFDEHFKISPEVGSVAHTGWHWGVYGFENDTFKLTIDDNAGIDIDAKDV 141
Query: 137 SQCTT-GKNEVTVEFHPNDEA--AESLIEMRFYIPT------NEIAGDTDPVEAFKDSVM 187
+Q T K ++ VEF N + L+E+RF IP NE+A +E K + +
Sbjct: 142 TQVTVPTKTDLAVEFKQNKGYINGDELMEIRFCIPNKPDVDDNELA-----LEDLKQTFL 196
Query: 188 NQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP 247
+A + + +A ++ + PRGR++I+ + HGK++DY + + + RMF +P
Sbjct: 197 LKAGLDELKSETLAFLTDVPLIVPRGRFEIEFSRKHIKYHGKSYDYTMFFTNISRMFLVP 256
Query: 248 HKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKEL 307
+ F+I L P++QGQTRY F+ + F+ +E E+E+ E++L+ KL+K +
Sbjct: 257 KPNSPHINFIIGLHQPMRQGQTRYPFVVMQFDAEEDIELEINMPEEDLESM---KLEKVM 313
Query: 308 SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPP 367
+G T+ V+ K+ +VN+ I VPG F+ + +C+YKA +GY++PL R +FI KP
Sbjct: 314 TGKTFNVVTKLFGTLVNKPIVVPGEFKSEKEEAGFSCTYKATSGYMFPLNRSLLFIVKPV 373
Query: 368 IHIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLR 425
I IRF+EI +V F+R+G ST R F F I K+G + F+++++ E+ L ++ + ++
Sbjct: 374 IFIRFDEIISVEFSRTGVSTQNRFFAFSISTKNGQEYEFTNVDRAEFEPLSKYLASRDVK 433
Query: 426 VK 427
+K
Sbjct: 434 IK 435
>gi|403362281|gb|EJY80865.1| DNA polymerase delta binding protein [Oxytricha trifallax]
Length = 515
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 201/381 (52%), Gaps = 51/381 (13%)
Query: 100 KELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE--- 155
K +S +GWNWG +SF VN F + +D++ T TGKNEVT EF + E
Sbjct: 4 KVVSTKGWNWGYYNLEKENMSFTVNGQPCFIVNYKDIALSTATGKNEVTFEFQVDSENKN 63
Query: 156 -AAESLIEMRFYIPTNEIAG---------------------------------------- 174
A+ L EMRFY+P +E+
Sbjct: 64 DRADILTEMRFYVPNSELDSLEEEKKKEETGKEEEEKKEKKEDGAADEEEDDEEEEEEEI 123
Query: 175 DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYK 234
P + F + ++ A + G+ IA +E+ L PRG+Y ++++SF +LHG+T DYK
Sbjct: 124 SITPAQIFNEKIIKAAGIGEFAGEMIASLSELPMLIPRGKYSFQLYSSFAKLHGRTNDYK 183
Query: 235 IPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQE 294
I + + F LP DG +V+ L P++QGQT +H++ L F +++T ++ + S ++
Sbjct: 184 IQYKDITKGFLLPKPDGIHMAYVLHLKVPLRQGQTLHHYILLQFEREKTVKVHINLSPEQ 243
Query: 295 LKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIY 354
+K++Y +L EL GP Y+V++K+ + ++ I +P F+ A+ CS KA+ GY+Y
Sbjct: 244 IKDQYGDRLTSELEGPLYDVISKLFRELIKINILIPSEFKSSKKDDAIKCSVKASDGYLY 303
Query: 355 PLERGFIFIHKPPIHIRFEEIATVNFAR-----SGGSTRSFDFEI-ELKSGVLHTFSSIE 408
PL+ IFIHKP I+++ EI V F R SG +RSFD I LK + TF+ I+
Sbjct: 304 PLKSSIIFIHKPVIYLKHTEIKFVEFRRVGQISSGIPSRSFDMTITSLKDNLATTFAGID 363
Query: 409 KEEYGKLFDFIREKKLRVKNT 429
K E+ L ++++ K +++++
Sbjct: 364 KAEHKNLVNYLKSKNIKMRSV 384
>gi|164659240|ref|XP_001730744.1| hypothetical protein MGL_1743 [Malassezia globosa CBS 7966]
gi|159104642|gb|EDP43530.1| hypothetical protein MGL_1743 [Malassezia globosa CBS 7966]
Length = 597
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 155/251 (61%), Gaps = 3/251 (1%)
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
AF +++ +A + GD I V E+ LTPRGRYDI +F +F +L GKT+DYKI S++
Sbjct: 262 AFHNAIKAKADIGQVAGDGILVLKEVLILTPRGRYDIDLFPTFLRLRGKTYDYKILYSSI 321
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
++F LP D F+++LDPP++QGQTRY FL L F ++E + EL E+ ++ KYE
Sbjct: 322 TQLFLLPKPDDIHVLFIVALDPPVRQGQTRYPFLVLQFPREEEMDAELNLDEETIQTKYE 381
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGF 360
GKL K PT+ ++ + +V +K+ VP F TG +V C+ KA G +YPL +
Sbjct: 382 GKLKKRYEEPTFRIVTNLFRVFSQQKVHVPTGFTNSTGQESVRCNVKANDGMLYPLNKSL 441
Query: 361 IFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVLHTFSSIEKEEYGKLFD 417
I++ K PI I + ++ F+R GG S ++FD +EL+ G HTF SI +EE L +
Sbjct: 442 IWVSKQPILISYHDVHQFVFSRVGGAIASAKTFDLRVELQHGTDHTFQSISREELDSLNN 501
Query: 418 FIREKKLRVKN 428
F E+KLRVKN
Sbjct: 502 FFAERKLRVKN 512
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGS----LHRFAG 76
G ++ + + +K G I + W ++ + L+I +K + F
Sbjct: 18 GMIRFSQAGLGWKPLDEGSTVTIPADQMTAFAWLRVARNFQLKIKMKGDGEGEHVATFEN 77
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F+ + ++ + + + E+S RGWNWG + + + F V N AF +PL ++
Sbjct: 78 FQREDHARLEQVLRECYDKALETIEISTRGWNWGSAEVGEHDMLFYVKNRLAFSLPLANI 137
Query: 137 SQC-TTGKNEVTVEF-HPNDEAAE-----------------------SLIEMRFYIP 168
+ G+ EV++EF +P D+ E L+EMR YIP
Sbjct: 138 ANSNIAGRTEVSMEFINPKDQRPEQNTGASSGADGLQFHGSKKNRPDQLVEMRLYIP 194
>gi|82704506|ref|XP_726583.1| structure specific recognition protein [Plasmodium yoelii yoelii
17XNL]
gi|23482051|gb|EAA18148.1| putative structure specific recognition protein [Plasmodium yoelii
yoelii]
Length = 493
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 234/425 (55%), Gaps = 20/425 (4%)
Query: 16 GALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-----NGS 70
G G +++++ + +KNKKT V Q D+ W KL R+ LK +
Sbjct: 25 GGCDYGSFRMSNEFLGWKNKKTNSVYQYKCNDISEGEWIKLSYN-NNRLHLKFNESKDNL 83
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ F GF + I +I F+ F I + ++L+ +GWNWG K + L FD++ AF
Sbjct: 84 IVFFDGFPDRNIAEITQHFQKYFNIKLGTRKLATKGWNWGEFKLENSNLFFDIDKKYAFN 143
Query: 131 IPLRDVSQCTTG-KNEVTVEFHPNDEAAES-----LIEMRFYIPTNEIAGDTDPVEAFKD 184
I +++Q K ++ +E NDE ++ L E+RFY P + + K+
Sbjct: 144 INTNNINQLNVQIKTDIAIEL-KNDENKQNTNEDVLSEIRFYYPHEN--DENQNFQDLKN 200
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
+++ + ++ ++ + IA + I L PRGRY+I++++ F+LHGK++D+ + S + +M
Sbjct: 201 NLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNINKML 260
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
+P + Q + SL+ IKQGQT Y F+ + + D+ ++++ SE++++ KL+
Sbjct: 261 LVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDINASEEDIQNY---KLE 317
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
K L+G Y+V+ ++ + + +PG +R +TCSY+AA+G +YPL + F+F+
Sbjct: 318 KTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFVV 377
Query: 365 KPPIHIRFEEIATVNFARSG--GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREK 422
KP I I F++I T++F R+G R F I+ K G+ + +++I+K EY L +F++ K
Sbjct: 378 KPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGISYEYTNIDKSEYAPLLEFLKSK 437
Query: 423 KLRVK 427
L ++
Sbjct: 438 NLNIQ 442
>gi|399219077|emb|CCF75964.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 239/434 (55%), Gaps = 27/434 (6%)
Query: 12 SEFRGALCP--GKLKITDQNIVFKNKKTGKVEQINGPDLD---FVNWQKLVGTWALRIFL 66
S RG P G K + + +KNK+TG++ Q N D+ F+ + G++ LR+ L
Sbjct: 9 SNIRGFGSPDLGAFKASGELFGWKNKRTGEIFQYNHQDIQSGIFIKTSQ--GSYQLRLQL 66
Query: 67 ---KNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDV 123
KN S+ RF GF E + ++ + F F ID+P E+S +GW+WG F + L F +
Sbjct: 67 NANKNNSIARFDGFTERAMAEVTTHFAKYFNIDMPRHEVSSKGWHWGEYNFQDSSLLFKI 126
Query: 124 NNTTAFEIPLRDVSQCTT-GKNEVTVEFHPN---DEAAESLIEMRFYIPTNEIAGDTD-- 177
+ A +I + +++Q T K ++ +E + + + L+E+RF IP GDTD
Sbjct: 127 DKKPALDIDVNNIAQVTIPSKGDLAIELKSTLDRNISCDQLLEVRFCIP----KGDTDDF 182
Query: 178 --PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
+E+ K ++ ++ + +IA+F ++ + PRGR+++ + HGK++D+ I
Sbjct: 183 DYNLESLKQDLLERSGLGEVKSTSIALFTDVPSIVPRGRFELDFGRKGIKFHGKSYDFSI 242
Query: 236 PISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
TV RMF +P FVI LD ++QGQT+Y ++ L F+ ++ +E++L ++ E
Sbjct: 243 QYLTVNRMFLVPKPHSPHVIFVIGLDIAVRQGQTKYPYIVLQFDHEQDTELQLNVTKDEA 302
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
+ KL++E+ TY V+ K+ +V + I +P F+ AV CSY+A +G+++P
Sbjct: 303 QTL---KLEQEIKDKTYNVITKLFSALVGKTIIIPEDFKSSKDQFAVACSYRAGSGHLFP 359
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS--FDFEIELKSGVLHTFSSIEKEEYG 413
L + +F+ KP + R E++ ++ F R+G +T+S F + +K G F++I+K EY
Sbjct: 360 LPKSILFVVKPILFFRNEDVVSIEFLRTGLATQSRFFSVTVHVKGGNSFEFTNIDKNEYQ 419
Query: 414 KLFDFIREKKLRVK 427
L ++ + L+VK
Sbjct: 420 LLSNYFTNRGLKVK 433
>gi|68076909|ref|XP_680374.1| structure specific recognition protein [Plasmodium berghei strain
ANKA]
gi|56501298|emb|CAI04722.1| structure specific recognition protein, putative [Plasmodium
berghei]
Length = 493
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 234/425 (55%), Gaps = 20/425 (4%)
Query: 16 GALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-----NGS 70
G G +++++ + +KNKKT V Q D+ W KL R+ LK +
Sbjct: 25 GGCDYGPFRMSNEFLGWKNKKTNSVYQYKCNDISEGEWIKLSYN-NNRLHLKFNESKDNL 83
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ F GF + + +I F+ F I + ++L+ +GWNWG K + L FD++ AF
Sbjct: 84 IVFFDGFPDRNLSEITQHFQKYFNIKLGTRKLATKGWNWGEFKLENSNLIFDIDKKYAFN 143
Query: 131 IPLRDVSQCTTG-KNEVTVEFHPNDEAAES-----LIEMRFYIPTNEIAGDTDPVEAFKD 184
I +++Q K ++ +E NDE ++ L E+RFY P + + K+
Sbjct: 144 INTNNINQLNVQIKTDIAIEL-KNDENKQNTNEDVLSEIRFYYPHEN--DENQNFQDLKN 200
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
+++ + ++ ++ + IA + I L PRGRY+I++++ F+LHGK++D+ + S + +M
Sbjct: 201 NLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNINKML 260
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
+P + Q + SL+ IKQGQT Y F+ + + D+ ++++ SE++++ KL+
Sbjct: 261 LVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDINASEEDIQNY---KLE 317
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
K L+G Y+V+ ++ + + +PG +R +TCSY+AA+G +YPL + F+F+
Sbjct: 318 KTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFVV 377
Query: 365 KPPIHIRFEEIATVNFARSG--GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREK 422
KP I I F++I T++F R+G R F I+ K G+ + +++I+K EY L +F++ K
Sbjct: 378 KPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGISYEYTNIDKSEYAPLLEFLKSK 437
Query: 423 KLRVK 427
L ++
Sbjct: 438 NLNIQ 442
>gi|320165273|gb|EFW42172.1| structure-specific recognition protein 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 796
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 242/491 (49%), Gaps = 47/491 (9%)
Query: 178 PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPI 237
PV ++ + V + GD I ++ C TPRGRY + + + LHG+T D+KIP
Sbjct: 261 PVTRLFQRILGKVDVAHTAGDVIVSLLDVNCQTPRGRYQMDFYPTMLTLHGQTHDFKIPF 320
Query: 238 STVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEM--ELPFSEQEL 295
+++ + F LPH D + F V++LDPP++QGQT Y F+ L Q E E+ EL +E E+
Sbjct: 321 ASISKTFVLPHPDQFRVFVVLALDPPVRQGQTPYPFIVFLL-QTEGREISVELNMTEAEI 379
Query: 296 KEK------------YEG--------KLDKELSGPTYEVMAKIMKVIVNRKITVPGSF-- 333
EK EG + KE+SG ++A+++ + R P +
Sbjct: 380 AEKNLQVSKLINKNVREGDAPKPNHFAITKEMSGGEVMILARLLSAMSVRLPIQPAAASS 439
Query: 334 --RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFD 391
+ ++ SY+A+ GY++PLE FIF+HKP +I + +I TV F R ++F
Sbjct: 440 KDKAYSEQHGYKASYRASDGYLFPLENAFIFVHKPLTYIHYSDIKTVTFERGSSILKTFA 499
Query: 392 FEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGS-------- 443
F I SG TF+SI KEE L F K + +KP + +
Sbjct: 500 FTIVTHSGTGFTFNSIPKEEQRNLEQFCNAKARSKGFSVVADKPPARGAAAAAGDDSDDE 559
Query: 444 -----SDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPT 498
SDDE E D+Y R+K+E R+ D+ + E DEDF + +V EE+D N T
Sbjct: 560 DGAIHSDDE-ENDSYKRRMKKEGHAREIAGDDYDSEDEDEDFQANSDVEEVGEEFDENYT 618
Query: 499 PTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKS------KKDKESSGGSTKRKKKDKN 552
+ D SD+S+ + E + ++K +K +K + S TK+ KDKN
Sbjct: 619 SSSDDSGSDSSDSGSGSEDENGEPKVKKAKKHKKEHKPKPVRKAPKKSSSPTKKAAKDKN 678
Query: 553 APKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKE 612
APKKPMS+YM+W N+ R K NP + E+ G WK + EK + EK +A++
Sbjct: 679 APKKPMSSYMLWANENRAAFKAKNPDANVMELGSILGNAWKELGESEKNSWAEKATEARK 738
Query: 613 DYNEALKAYKE 623
Y L Y++
Sbjct: 739 AYEITLAEYEQ 749
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M+E ++F +S +G L G +K+ + + FKN+ TG V DL W + +
Sbjct: 1 MSEGVQFNNISLLSKGKLFKGMVKMQEAGVAFKNQATGAVTLAASSDLRGFAWHRAATGY 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L I L + L R GFKE + I + + F V +++ +GW WG +F GN L+
Sbjct: 61 ELAIQLPSSKL-RLLGFKEAHLTDIEQYVSSTFHQTVQTSDIATKGWTWGEPRFTGNGLA 119
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEF--HPNDEAAESLIEMRFYIPTNEIAGDTDP 178
F V+ AFE+PL DVSQ KN++T+EF ++ + L+ MRF + + + DP
Sbjct: 120 FYVDGKVAFELPLSDVSQTHMKKNDITLEFKQDDPNDDDQQLVNMRFVVHPSAVLESEDP 179
Query: 179 V 179
V
Sbjct: 180 V 180
>gi|429329163|gb|AFZ80922.1| structure-specific recognition protein family member protein [Babesia
equi]
Length = 1346
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 203/352 (57%), Gaps = 9/352 (2%)
Query: 89 FKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNEVT 147
F+T++ I V + E+S GW+WG +F + ++ + EI + Q T K ++
Sbjct: 960 FETHYNIQVNKDEVSSTGWHWGTYEFENSTFKLNIGSNAGLEIDATSILQATIPTKTDLA 1019
Query: 148 VEFHPNDE--AAESLIEMRFYIPTNEIAGDTD-PVEAFKDSVMNQASVINATGDAIAVFN 204
+E N+ + + L+E+RF +P + D + +E K + + ++ + + IA+
Sbjct: 1020 IELKSNENLYSVDDLVEIRFCVPNKTDSEDFEVQLEDLKQTFLLKSGLDELKSEKIALLM 1079
Query: 205 EIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPI 264
+I + PRGRY+I+ +LHGK++DY + S +LRMF LP + F++ L+ P+
Sbjct: 1080 DIPLIVPRGRYEIEFTKKSIKLHGKSYDYTLLFSNILRMFLLPKPNSPHINFILGLNQPM 1139
Query: 265 KQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVN 324
+QGQTRY ++ + F+ D+ ++EL E+E + KL+K L G TY V++++ +VN
Sbjct: 1140 RQGQTRYPYIVMQFDMDDELQVELNLDEKETEAL---KLEKTLEGKTYSVVSRLFGALVN 1196
Query: 325 RKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG 384
R I VPG F+ G S +C+YKA +G+++PL R +FI KP I IRFE+I +V F R+G
Sbjct: 1197 RSIVVPGDFKSDKGDSGFSCTYKATSGHLFPLNRSLLFIVKPVIFIRFEDIVSVEFNRTG 1256
Query: 385 --GSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEK 434
R F I +K G+ + F++I+K E+ L ++ + +++K+ + EK
Sbjct: 1257 VVSQNRFFAVIISMKGGMEYEFTNIDKAEFEHLNAYLTSRDIKIKSLEESEK 1308
>gi|295663761|ref|XP_002792433.1| FACT complex subunit pob3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279103|gb|EEH34669.1| FACT complex subunit pob3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 571
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 246/532 (46%), Gaps = 113/532 (21%)
Query: 35 KKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFK 94
K G ++ ++ W + + L+I ++ + + GF++ + D+ FK +
Sbjct: 74 KCGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQEDFDRTSKAFKIWYG 133
Query: 95 IDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFH-P 152
I++ +E ++RGWNWG +F L+F+V N AFE+P ++S GKNEV VEF P
Sbjct: 134 INIENREHALRGWNWGKAEFTKAELTFNVQNRPAFELPYSEISNTNLAGKNEVAVEFALP 193
Query: 153 ND---------------------EAAESLIEMRFYIPTNEI------------------- 172
D + L+EMRFYIP +
Sbjct: 194 VDGVNGTNGQSEGSTKSRGRKAGAGRDELVEMRFYIPGTALKKEKPEGEEGEGDEKSVHG 253
Query: 173 --AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKT 230
A + + F +++M++A + + GD A F ++ LTPRGR+DI ++ S F+L GKT
Sbjct: 254 EEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKT 313
Query: 231 FDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPF 290
+DYKI ++ + F LP D + LDPP++QGQTRY FL M+L
Sbjct: 314 YDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLV----------MQL-- 361
Query: 291 SEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAA 350
KLD E+S ++ +T H G S V CS KA
Sbjct: 362 -----------KLDDEIS--------------IDLNMT------DHHGHSGVKCSIKANE 390
Query: 351 GYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSS 406
G ++ L++ F+F+ KP +++ E I+ + +R GG ++R+FD + LK G+ H FS+
Sbjct: 391 GLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMTLKGGMGEHQFSN 450
Query: 407 IEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDD 466
I +EE L +F + K +R KN +DD A A + E A D+
Sbjct: 451 INREEQQPLEEFFKAKNIRFKNE-------------MADDSSALIA--AALDNEDASSDE 495
Query: 467 EDDEDEDESTDEDFNPD-------QAESDVAEEYDSNPTPTDSDEDSDASEG 511
E D + ++ ++ESDVAEEYDS + S D++ +G
Sbjct: 496 EMAAGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESSGSGSDAEVDDG 547
>gi|116191855|ref|XP_001221740.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181558|gb|EAQ89026.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 540
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 226/458 (49%), Gaps = 67/458 (14%)
Query: 83 DKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-T 141
+++ FK + + KE S+RGWNWG +F +SF+V N AFEIP ++S
Sbjct: 62 ERLSKIFKNWYSATLENKEHSLRGWNWGKAEFGKAEISFNVQNRPAFEIPYSEISNTNLA 121
Query: 142 GKNEVTVEFHPND-------------------EAAESLIEMRFYIP----------TNEI 172
G+NE+ VEF D + L EMRFYIP +N
Sbjct: 122 GRNEIAVEFSVADAGKSNGQNGATPGKGKKAAAGRDQLTEMRFYIPGTTTRKEAEGSNAG 181
Query: 173 AG----DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
+G + V F D+++ +A + GD IA F ++ LTPR + +FF L
Sbjct: 182 SGVDEEEKSAVTLFYDTLIEKADIGETAGDTIATFLDVLHLTPR---SVAPTLTFFCL-- 236
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
+ V + LP D I LDPP++QGQTRY FL + F QDE ++L
Sbjct: 237 ------VSNGRVEKFMVLPKPDDTHFMLCIGLDPPLRQGQTRYPFLIMQFKQDEEVTLDL 290
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG-SFRGHTGTSAVTCSYK 347
+E+EL KY+ KL P ++V+A I K + N+KIT P F H + CS K
Sbjct: 291 NLAEEELNGKYKDKLQPHYEQPLHQVVAYIFKGLANKKITAPAKDFTTHRQQYGIKCSIK 350
Query: 348 AAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRS---FDFEIELKSGVLHT- 403
A+ G++Y LE+ F+F+ KP +I +++ ++ F+R G+ + FD + +KSG +
Sbjct: 351 ASEGFLYCLEKAFMFVPKPATYISYDQTQSITFSRVNGAVSALSTFDITVHMKSGAGSSQ 410
Query: 404 FSSIEKEEYGKLFDFIREKKLRVKN-----TGKGEKPNYKEDFGSSDDEKEPDAYLARVK 458
FS+I +E+ L DF + K LRVKN T E SSD+E A+
Sbjct: 411 FSNINREDLKALEDFFKLKGLRVKNEIDEETTLMAAALRDEAMASSDEE----VVGAKAD 466
Query: 459 REAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSN 496
R +A+ D+E +++ S Q ESDVAEEYDSN
Sbjct: 467 RGSADEDEESVDEDFRS--------QTESDVAEEYDSN 496
>gi|254579162|ref|XP_002495567.1| ZYRO0B14410p [Zygosaccharomyces rouxii]
gi|238938457|emb|CAR26634.1| ZYRO0B14410p [Zygosaccharomyces rouxii]
Length = 574
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 190/321 (59%), Gaps = 19/321 (5%)
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
EAF + + +A + +GD+I F ++ TPRGRYDI I+ + +L GKT++YK+
Sbjct: 248 EAFHEELKEKADIGEVSGDSIVSFQDVFFATPRGRYDIDIYKNSIRLRGKTYEYKLQHRQ 307
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ R+ +LP D + V+S++PP++QGQT Y FL L F +DE +E++L +++ + Y
Sbjct: 308 IQRIVSLPKADDINHLVVLSIEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDFEANY 367
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+ KL +E T+ V++ ++K + R++ VPG ++ AV+CSYKA GY+YPL+
Sbjct: 368 KDKLKREYDAKTHIVVSHVLKGLTGRRVMVPGEYKSKYDQCAVSCSYKANEGYLYPLDNA 427
Query: 360 FIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHTFSSIEKEEYGKL 415
F F+ KP ++I F ++++VN +R+G S+R+FD E+ L+ TF++I KEE L
Sbjct: 428 FFFLTKPTLYIPFMDVSSVNISRAGQASTSSRTFDLEVTLRGNRGSTTFANISKEEQQLL 487
Query: 416 FDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDEDES 475
F++ + LRVKN K + + GS DE + + A EDE ES
Sbjct: 488 EQFLKARNLRVKNEDKEAQERLQSALGSDSDEGDINMGSA-------------GEDE-ES 533
Query: 476 TDEDFNPD-QAESDVAEEYDS 495
DE+F D + + D+AEEY+S
Sbjct: 534 ADEEFRADSEDDDDLAEEYNS 554
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K+ TG Q P +L V W + + L++ KN +
Sbjct: 17 GRFRIADSGLGWKSANTGGSAANQTKQPFLLPATELSTVQWSRGCRGFELKVNTKNQGVV 76
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + I + F F + V KE S+RGWNWG N + F +N +FE+P
Sbjct: 77 QLDGFAPDDFNLIKNDFHRRFNVQVEPKEHSLRGWNWGKADLARNEMVFALNGRPSFEVP 136
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP---TNE 171
++ T K EV +EF+ DE A + L+EMR Y+P TNE
Sbjct: 137 YARINNTNLTSKTEVAIEFNLADENYQPAGDELVEMRLYVPGTVTNE 183
>gi|449518545|ref|XP_004166302.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 327
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 183/327 (55%), Gaps = 9/327 (2%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + + +S RG PG+LK + I +K + GK +++ D+ V W K+ +
Sbjct: 1 MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L I +K+G ++F GF++ +I + FF++N I EK+LSV G NWG GN+L+
Sbjct: 61 QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
Query: 121 FDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAA----ESLIEMRFYIP-TN-EIA 173
F V + AFE+ L DV+Q GKN+V +EFH +D +SL+E+ F+IP TN +
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD P + F+D +M+ A V +A+ F I LTPRGRY +++ SF +L G+
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
Query: 232 DYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFS 291
D+KI S+V+R+F LP + F V++LDPPI++GQT Y + L F D + L
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
Query: 292 EQELKEKYEGKLDKELSGPTYEVMAKI 318
++ KY+ KL+ G +EV I
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTI 327
>gi|68063811|ref|XP_673901.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56492088|emb|CAI02497.1| hypothetical protein PB300791.00.0 [Plasmodium berghei]
Length = 415
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 216/398 (54%), Gaps = 20/398 (5%)
Query: 16 GALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLK-----NGS 70
G G +++++ + +KNKKT V Q D+ W KL R+ LK +
Sbjct: 25 GGCDYGPFRMSNEFLGWKNKKTNSVYQYKCNDISEGEWIKLSYN-NNRLHLKFNESKDNL 83
Query: 71 LHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFE 130
+ F GF + + +I F+ F I + ++L+ +GWNWG K + L FD++ AF
Sbjct: 84 IVFFDGFPDRNLSEITQHFQKYFNIKLGTRKLATKGWNWGEFKLENSNLIFDIDKKYAFN 143
Query: 131 IPLRDVSQCTTG-KNEVTVEFHPNDEAAES-----LIEMRFYIPTNEIAGDTDPVEAFKD 184
I +++Q K ++ +E NDE ++ L E+RFY P + + K+
Sbjct: 144 INTNNINQLNVQIKTDIAIEL-KNDENKQNTNEDVLSEIRFYYPHEN--DENQNFQDLKN 200
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMF 244
+++ + ++ ++ + IA + I L PRGRY+I++++ F+LHGK++D+ + S + +M
Sbjct: 201 NLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNINKML 260
Query: 245 TLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLD 304
+P + Q + SL+ IKQGQT Y F+ + + D+ ++++ SE++++ KL+
Sbjct: 261 LVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDINASEEDIQNY---KLE 317
Query: 305 KELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIH 364
K L+G Y+V+ ++ + + +PG +R +TCSY+AA+G +YPL + F+F+
Sbjct: 318 KTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFVV 377
Query: 365 KPPIHIRFEEIATVNFARSGGST--RSFDFEIELKSGV 400
KP I I F++I T++F R+G R F I+ K G+
Sbjct: 378 KPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGI 415
>gi|71028242|ref|XP_763764.1| structure specific recognition protein [Theileria parva strain
Muguga]
gi|68350718|gb|EAN31481.1| structure specific recognition protein, putative [Theileria parva]
Length = 460
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 221/428 (51%), Gaps = 59/428 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKL-VGTWALRIFL---KNGSLHRFAG 76
G K++++ +KNK+TG+V Q D+ + + K + LRI L K + RF G
Sbjct: 41 GAFKVSNELFGWKNKRTGEVLQHRSSDVSSITFVKTNSNLYQLRIELNESKQFKVLRFDG 100
Query: 77 FKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDV 136
F E + + F+ N+K+ + E+S GW+WG +F +NN + +I + +
Sbjct: 101 FTEKNVLDLSKHFEENYKMSCEKDEVSCTGWHWGTYEFDNTTFRLRINNNSGLDIDAQSI 160
Query: 137 SQCTT-GKNEVTVEFHPNDEAAES--LIEMRFYIPT------NEIAGDTDPVEAFKDSVM 187
Q T K ++ +E + S L+E+RF +P NEI +E K + +
Sbjct: 161 IQATIPSKTDLAIELKNVNTLNNSDELVEIRFCLPNKLDPEDNEIQ-----LEDLKQTFL 215
Query: 188 NQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP 247
++ + + IA+ +I + PRGRY+I+ FT
Sbjct: 216 VKSGLDEMKSEKIALLMDIPLIVPRGRYEIE-------------------------FT-- 248
Query: 248 HKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKEL 307
R+ L ++QGQTRY ++ + F D ++++L EQ+LK+ KLDK L
Sbjct: 249 ---KRR------LSQSMRQGQTRYAYIVMQFESDHETKVDLNLQEQDLKQY---KLDKVL 296
Query: 308 SGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPP 367
G TY V++++ +VNR I VPG F+ G SA++C+YKA +G+++PL R +FI KP
Sbjct: 297 EGKTYNVVSRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHLFPLNRSLLFIVKPV 356
Query: 368 IHIRFEEIATVNFARSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLR 425
I IRFE+I +V F+R+G +T R F + ++ + + F++I+K E+ L +++ K +R
Sbjct: 357 IFIRFEDIVSVEFSRTGATTQNRFFAILVSMRGNIEYEFTNIDKTEFKYLNEYLLSKDIR 416
Query: 426 VKNTGKGE 433
VK + + E
Sbjct: 417 VKTSEETE 424
>gi|109157818|pdb|2GCJ|A Chain A, Crystal Structure Of The Pob3 Middle Domain
gi|109157819|pdb|2GCJ|B Chain B, Crystal Structure Of The Pob3 Middle Domain
gi|109157820|pdb|2GCJ|C Chain C, Crystal Structure Of The Pob3 Middle Domain
gi|109157821|pdb|2GCJ|D Chain D, Crystal Structure Of The Pob3 Middle Domain
Length = 261
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 161/253 (63%), Gaps = 4/253 (1%)
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
EAF + + +A + GDAI F ++ TPRGRYDI I+ + +L GKT++YK+
Sbjct: 5 EAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQ 64
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ R+ +LP D + V++++PP+++GQT Y FL L F +DE +E++L +++ +E Y
Sbjct: 65 IQRIVSLPKADDIHHLLVLAIEPPLRKGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENY 124
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+ KL K+ T+ V++ ++K + +R++ VPG ++ AV+CS+KA GY+YPL+
Sbjct: 125 KDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNA 184
Query: 360 FIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHTFSSIEKEEYGKL 415
F F+ KP ++I F +++ VN +R+G S+R+FD E+ L+S TF++I KEE L
Sbjct: 185 FFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLL 244
Query: 416 FDFIREKKLRVKN 428
F++ K LRVKN
Sbjct: 245 EQFLKSKNLRVKN 257
>gi|109157822|pdb|2GCL|A Chain A, Structure Of The Pob3 Middle Domain
gi|109157823|pdb|2GCL|B Chain B, Structure Of The Pob3 Middle Domain
Length = 261
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 160/253 (63%), Gaps = 4/253 (1%)
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
EAF + + +A + GDAI F ++ TPRGRYDI I+ + +L GKT++YK+
Sbjct: 5 EAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQ 64
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ R+ +LP D + V +++PP++QGQT Y FL L F +DE +E++L +++ +E Y
Sbjct: 65 IQRIVSLPKADDIHHXXVXAIEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENY 124
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+ KL K+ T+ V++ ++K + +R++ VPG ++ AV+CS+KA GY+YPL+
Sbjct: 125 KDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNA 184
Query: 360 FIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHTFSSIEKEEYGKL 415
F F+ KP ++I F +++ VN +R+G S+R+FD E+ L+S TF++I KEE L
Sbjct: 185 FFFLTKPTLYIPFSDVSXVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLL 244
Query: 416 FDFIREKKLRVKN 428
F++ K LRVKN
Sbjct: 245 EQFLKSKNLRVKN 257
>gi|351713930|gb|EHB16849.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 278
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 144/241 (59%), Gaps = 43/241 (17%)
Query: 178 PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPI 237
PVEAF +V+++A +I A GD I VF E+QCLT +G P+
Sbjct: 75 PVEAFTQNVLSKADIIQAAGDTICVFLELQCLTLKG----------------------PV 112
Query: 238 STVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKE 297
VL +ISLD PIKQGQTRYHFL LLF++DE + L +++E+++
Sbjct: 113 PDVL---------------LISLDLPIKQGQTRYHFLILLFSKDEDISLPLNMNDEEVEK 157
Query: 298 KYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAG------ 351
+E L K +S YE+++++ K +VN KI VPG+ + H+G VTCSY+A++
Sbjct: 158 HFERWLTKNMSSSLYEMVSRVTKALVNHKIMVPGNSQRHSGAQCVTCSYEASSRLLTPME 217
Query: 352 YIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEE 411
++ P+E GFI++HKPP+H+ F EI VNFA +T SFDFEI K G +TF SIE+EE
Sbjct: 218 WLNPMEWGFIYVHKPPVHLCFIEITFVNFACGTTTTHSFDFEINTKQGTQYTFGSIEREE 277
Query: 412 Y 412
Y
Sbjct: 278 Y 278
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G L+++ Q I+ KN KTGKV+ + +L WQ++ L++ KNG ++++ F E+
Sbjct: 4 GHLRLSRQGIILKNSKTGKVDSVQAGELTKDIWQQVALGHGLKLLTKNGHVYKYDRFWES 63
Query: 81 EI 82
++
Sbjct: 64 DL 65
>gi|308811236|ref|XP_003082926.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
gi|116054804|emb|CAL56881.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
Length = 583
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 194/392 (49%), Gaps = 32/392 (8%)
Query: 53 WQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
W + LRI G G E + +F F E+E++V G NWG
Sbjct: 42 WSETPTGGVLRIRSTTGETLTLGGIGVDEARRAAAFCAETFGCSTGEREVNVNGRNWGDV 101
Query: 113 KFIGNVLSFDVNNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAE--SLIEMRFYIPT 169
G F+V+ T FE+ + +S+ T GKNEV ++FH +D AAE SL+EM F++P
Sbjct: 102 AIEGASTVFEVDGKTQFELEGKYISEATVVGKNEVVMQFHTDDTAAEKDSLVEMSFFVPP 161
Query: 170 -NEIAGDTDP-------VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFN 221
+E DP + ++++ A+ G+ + + + +
Sbjct: 162 GSETWAGEDPENPEDSAAHRLRAAILSIAAADAEAGEPVT---------------MDLHH 206
Query: 222 SFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQD 281
++ ++ T D+K+ S+++R++ LP Q+ VI+LDPPI++GQT Y + +FN D
Sbjct: 207 TYMKMQSSTLDFKVQYSSIVRVYLLPKPHSNQSHAVIALDPPIRKGQTFYPHILAMFNDD 266
Query: 282 ETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA 341
E + +P E +KEK+ L+ G EV +++K + K+T +F G A
Sbjct: 267 EHLTV-VPNLEPAMKEKFP-TLEASYDGSVGEVFVRVLKNLAGVKLTRQSAFTASAGGHA 324
Query: 342 VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGG----STRSFDFEIELK 397
+ S+KA G +YPLE+ F ++ KPP+ + + E+ V F R S ++FD I +K
Sbjct: 325 IRVSHKADVGLLYPLEKAFFYVPKPPLLLHYSEVDEVEFERHAAAGHSSAKTFDLTITMK 384
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNT 429
G + F I++ E+ L +F+ K++R+ N
Sbjct: 385 GGSSYDFHGIQRSEFQNLVNFLTAKEVRISNV 416
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
++ +SAYM + R +I + NP T+IAK GE WKTVS EK+ Y ++ + K Y
Sbjct: 480 QRGLSAYMFFSAAKRAEIAEANPEFGITDIAKALGERWKTVSD-EKSVYQQQAEEDKARY 538
Query: 615 NEALKAY 621
+ Y
Sbjct: 539 EREMAEY 545
>gi|76155858|gb|AAX27130.2| SJCHGC02636 protein [Schistosoma japonicum]
Length = 237
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 139/238 (58%), Gaps = 12/238 (5%)
Query: 13 EFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLH 72
E RG + PGKL++ + ++KN+KTGKV+ + D++ W L I LKN SLH
Sbjct: 1 EVRGTVYPGKLRLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLGLSIKLKNNSLH 60
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGN---------VL--SF 121
R+ GF E E +K+ SFFK F ++V ++ELS +G+NWG F GN V+ SF
Sbjct: 61 RYDGFGEIEAEKVGSFFKKYFDVEVVKRELSYKGYNWGDVDFDGNSNFDYLLIKVMSSSF 120
Query: 122 DVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEA 181
+ FE+PL +V+ T KNE+ EFH NDEA L EMR Y P E A
Sbjct: 121 QLKMLWLFEVPLSNVANATLNKNEIIFEFHLNDEAEICLSEMRLYTPGTE-ADREGKAPI 179
Query: 182 FKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
V +A +I TGD + F ++QCL PRGRYD+K++ SF LHGK+FD+K+P +T
Sbjct: 180 IYSKVTQKADIIQVTGDFLIEFKQLQCLQPRGRYDVKLYPSFIHLHGKSFDFKVPKNT 237
>gi|76152542|gb|AAX24231.2| SJCHGC02635 protein [Schistosoma japonicum]
Length = 221
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 131/219 (59%), Gaps = 1/219 (0%)
Query: 5 LEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRI 64
+ F ++ E RG + PGKL++ + ++KN+KTGKV+ + D++ W L I
Sbjct: 4 IAFDHITQEVRGTVYPGKLRLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLGLSI 63
Query: 65 FLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVN 124
LKN SLHR+ GF E E +K+ SFFK F ++V ++ELS +G+NWG F G+VL F V
Sbjct: 64 KLKNNSLHRYDGFGEIEAEKVGSFFKKYFDVEVVKRELSYKGYNWGDVDFDGDVLEFSVK 123
Query: 125 NTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKD 184
N AFE+PL +V+ T KNE+ EFH NDEA L EMR Y P E A
Sbjct: 124 NAMAFEVPLSNVANATLNKNEIIFEFHLNDEAEICLSEMRLYTPGTE-ADREGKAPIIYS 182
Query: 185 SVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSF 223
V +A +I TGD + F ++QCL PRGRYD+K++ SF
Sbjct: 183 KVTQKADIIQVTGDFLIEFKQLQCLQPRGRYDVKLYPSF 221
>gi|346971388|gb|EGY14840.1| FACT complex subunit pob-3 [Verticillium dahliae VdLs.17]
Length = 334
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 168/310 (54%), Gaps = 36/310 (11%)
Query: 212 RGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRY 271
RGR+DI ++++ F+L GKT+DYKI + + LP D + LDPP++QGQTRY
Sbjct: 8 RGRFDIDMYDTSFRLRGKTYDYKIQYEAIKKFMVLPKPDDAHVMLCVGLDPPLRQGQTRY 67
Query: 272 HFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG 331
F+ + F +DE +++ +E+++K+KY KL P ++V+ I + + N+K+T P
Sbjct: 68 PFVVMQFKKDEEVTLDVNLTEEQIKDKYGDKLQSHYEQPLHQVITYIFRGLANKKVTTPA 127
Query: 332 -SFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST--- 387
F+ H + CS KA+ G++Y LE+ F+FI KP +I +E+ A++ F+R GG+
Sbjct: 128 KDFQTHRNQLGIKCSIKASEGFLYCLEKAFMFIPKPATYIAYEQTASITFSRVGGAVSAL 187
Query: 388 RSFDFEIELKSGVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDD 446
+FD + +K+G T FS+I +E+ L F + K LRVKN
Sbjct: 188 STFDITVLMKNGAGSTQFSNISREDLKGLETFFKLKNLRVKN------------------ 229
Query: 447 EKEPDAYLARVKREAAERDDEDDEDEDESTDE------------DFNPDQAESDVAEEYD 494
E + DA L + DD +DE D DF D +ESDVAEEYD
Sbjct: 230 EIDEDANLLKAALREEAMDDSEDEVVGNKADRGSADEDEESVDEDFRAD-SESDVAEEYD 288
Query: 495 SNPTPTDSDE 504
SNP +DS++
Sbjct: 289 SNPETSDSED 298
>gi|389585441|dbj|GAB68172.1| structure specific recognition protein, partial [Plasmodium
cynomolgi strain B]
Length = 354
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 167/285 (58%), Gaps = 9/285 (3%)
Query: 160 LIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
L E+RF P + + FK+ ++ + ++ ++ + IA I L PRGRY+I++
Sbjct: 22 LSEIRFCYPHEN--DENQNFQNFKNDLLEKVNIGDSKSECIASLANIPLLVPRGRYEIEM 79
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ F+LHGK++D+ I + + +M +P + Q + SL+ +KQGQT Y F+ + N
Sbjct: 80 YTKSFKLHGKSYDFTIQYTNINKMLLVPKSNSNQYVLIFSLNNKMKQGQTEYPFILIQLN 139
Query: 280 QDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGT 339
D+ E+++ SE+++K KY KL+K LSG Y+V+ ++ +V + +PG +R
Sbjct: 140 NDDDMELDINASEEDVK-KY--KLEKSLSGKAYDVVTRLFTALVKKNAIIPGDYRTAKNE 196
Query: 340 SAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG--GSTRSFDFEIELK 397
+TCSY+AA+G +YPL + F+FI KP I I F++I T++F R+G R F I+ K
Sbjct: 197 HGITCSYRAASGQLYPLNKYFLFIIKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHK 256
Query: 398 SGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFG 442
G+ + +++I+K EY L +F++ K + +++ K+DFG
Sbjct: 257 RGMSYEYTNIDKNEYLPLLEFLKSKNINIQDDANVTDK--KQDFG 299
>gi|343958672|dbj|BAK63191.1| FACT complex subunit SSRP1 [Pan troglodytes]
Length = 239
Score = 180 bits (456), Expect = 3e-42, Method: Composition-based stats.
Identities = 79/160 (49%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
G+L+++ Q I+FKN KTGKV+ I +L W+++ L++ KNG ++++ GF+E+
Sbjct: 12 GRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRES 71
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
E +K+ FFKT++++++ EK+L V+GWNWG KF G +LSFD+ + FEIPL +VSQCT
Sbjct: 72 EFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPLSNVSQCT 131
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
TGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 132 TGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVE 170
>gi|147903437|ref|NP_001090281.1| Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
[Xenopus laevis]
gi|68533730|gb|AAH98960.1| MGC114656 protein [Xenopus laevis]
Length = 365
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 121/168 (72%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF ++ E +G++ G+L+++ +++KN KTGKVE I+ D+ V W+++
Sbjct: 1 MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+++ G ++++ GF+ETE DK+ +FK++F +++ EK+L V+GWNWG +F G +LS
Sbjct: 61 GIKLLTNGGHVYKYDGFRETEYDKLFDYFKSHFSVELVEKDLCVKGWNWGSVRFGGQLLS 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIP 168
FD+ + AFE+PL +VSQCTTGKNEVT+EFH D++ SL+E+RFY+P
Sbjct: 121 FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQTDDSEVSLMEIRFYVP 168
>gi|156051618|ref|XP_001591770.1| hypothetical protein SS1G_07216 [Sclerotinia sclerotiorum 1980]
gi|154704994|gb|EDO04733.1| hypothetical protein SS1G_07216 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 302
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 175/312 (56%), Gaps = 26/312 (8%)
Query: 219 IFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLF 278
++ + F+L GKT+DYKI + + LP D I LDPP++QGQTRY FL + F
Sbjct: 1 MYENSFRLRGKTYDYKIQYDHIKKFMVLPKPDELHFMICIGLDPPLRQGQTRYPFLVMQF 60
Query: 279 NQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHT 337
+DE ++L E+ ++EKY GKL + P +EV+ ++ + + +KI P F H
Sbjct: 61 KKDEEVTIDLNMMEEVMEEKYGGKLVQHYEQPLHEVVTQVFRGLAGKKINQPAKDFLSHH 120
Query: 338 GTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEI 394
+ CS KA+ G++Y LE+ F+F+ KP +I +E+I+ + F+R GG+T R+FD +
Sbjct: 121 SQYGIKCSIKASEGFLYCLEKAFMFVPKPATYITYEQISVITFSRVGGATSASRTFDIAV 180
Query: 395 ELKSGVLHT-FSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY-----KEDFGSSDDEK 448
LK+G T FS+I +EE L DF + K LRVKN + + D SSD+E
Sbjct: 181 GLKNGAGETQFSNINREEQKNLEDFFKIKGLRVKNEMDEDNTAHIALLDNPDMQSSDEE- 239
Query: 449 EPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDS--NPTPTDSDED- 505
AR R +A+ +DES DEDF D ESDVAEEYDS + TDS+E+
Sbjct: 240 ---VVAARADRGSADE-------DDESVDEDFKTD-TESDVAEEYDSAHESSGTDSEEEG 288
Query: 506 -SDASEGTKKKK 516
SDA KK K
Sbjct: 289 GSDAERPAKKAK 300
>gi|145535097|ref|XP_001453287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420998|emb|CAK85890.1| unnamed protein product [Paramecium tetraurelia]
Length = 425
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 177/352 (50%), Gaps = 29/352 (8%)
Query: 103 SVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAES--- 159
+G NWG LS N++ ++PL+ V T KN++ ++ +E E+
Sbjct: 5 CTKGINWGSVSVDDKNLSLRYNSSNIIKLPLKKVVNSNTQKNDIVLQL-TTEECGENDDM 63
Query: 160 LIEMRFYIPTNEIA---------GDTD-----------PV--EAFKDSVMNQASVINATG 197
L E+RF+IP E D+D P + ++ ++ +A + ++
Sbjct: 64 LCEVRFFIPPQEQKVKQEKKKQDADSDQEKVDEEEDEEPTFQQQLQNEILVKAKIGQSSA 123
Query: 198 DAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFV 257
D+I N++ + PRGRY + F + HG T+ + + R F LP D V
Sbjct: 124 DSILTINDVPLIVPRGRYTMDFFKKDIRFHGNTYQFTTDYKGISRFFLLPMPDEINLSLV 183
Query: 258 ISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAK 317
I L+ P KQGQT Y++L + F +D +E++L + Q+L E ++ +E SGP Y+ + +
Sbjct: 184 IGLEHPFKQGQTAYNYLVMQFKKDYENEIKLKYQRQQLDEIGWKEIKEEYSGPLYDTVCE 243
Query: 318 IMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIAT 377
++ I K+ P +F+ G + CS +G+++PLE+ I++ KP +HI+ EEI
Sbjct: 244 LLSEITGIKVVTPKNFKTKNGLCCLRCSVGPHSGFLFPLEKSLIYLQKPVLHIKHEEIKE 303
Query: 378 VNFARSGGSTRS--FDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVK 427
V F R G + + FD ++ K+ FSSIEK+E L ++ KK+ V+
Sbjct: 304 VIFQRIGQTNLNKFFDVKVIYKNSN-QLFSSIEKDELDNLTQYLSTKKIAVR 354
>gi|170050308|ref|XP_001860639.1| structure-specific recognition protein [Culex quinquefasciatus]
gi|167871977|gb|EDS35360.1| structure-specific recognition protein [Culex quinquefasciatus]
Length = 267
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 97/121 (80%)
Query: 290 FSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAA 349
+ Q L G KELSGP YEV+ KIMKVI NRK+T G+F GH+GT AV CSYKAA
Sbjct: 115 WVAQRLTVLGGGGGGKELSGPVYEVLGKIMKVINNRKLTGTGTFIGHSGTPAVGCSYKAA 174
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEK 409
AGYIYPLERGFI++HKP +HIRFEEIA+VNFARSGGST SFDFEIELK+G ++ FSSI K
Sbjct: 175 AGYIYPLERGFIYVHKPRVHIRFEEIASVNFARSGGSTSSFDFEIELKTGNIYAFSSISK 234
Query: 410 E 410
E
Sbjct: 235 E 235
>gi|290978860|ref|XP_002672153.1| predicted protein [Naegleria gruberi]
gi|284085727|gb|EFC39409.1| predicted protein [Naegleria gruberi]
Length = 531
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 204/399 (51%), Gaps = 27/399 (6%)
Query: 51 VNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICS-FFKTNFKIDVP--EKELSVRGW 107
++W + LR++ + + GFKE + +++ S + + D+P + E ++G
Sbjct: 51 IDWLYTPRGYELRLWKADDDFVSYLGFKEADYEQLESQIVQVQVESDIPFNKVETCMKGV 110
Query: 108 NWGGTKFIGNVLSFDVNNTTAFEIPLRD-VSQC--TTGKNEVTVEFHPN---DEAAESLI 161
NWG G+ + + F I L D + C +E+ +EF + D+ + L
Sbjct: 111 NWGKPVIKGSHMMMYFEDKELFSISLADDIKNCQKIPKNSELLLEFRDDEHTDKNSIQLT 170
Query: 162 EMRFYIP-TNE--------------IAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEI 206
E+RF P T+E +A +A + + +A + G +A F+++
Sbjct: 171 EIRFVCPETSEPAEDQDEEEQEEKNLAIKDMTADALHEKISQKADLSKDLGTPVASFSQM 230
Query: 207 QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQ 266
L PRG+Y++ +F S +L+G+T+ +KI + +F LP + + VISLD P +Q
Sbjct: 231 PVLIPRGKYNVDLFKSHLRLYGRTYVHKITYKQISTLFLLPKPGDQHMYLVISLDTPFRQ 290
Query: 267 GQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRK 326
GQ + HF ++F ++ ++ P S + L++ G L +++G YEV AK+++ + +K
Sbjct: 291 GQ-KSHF-HIVFQIEKHKTLDEPLSIK-LEKNEMGDLTPKMNGKIYEVFAKVLRSLTKKK 347
Query: 327 ITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS 386
+ G + H A+ CS KA G ++ LE+ F+HKP I+IR +EI + F R+
Sbjct: 348 LIGSGKYVTHGNDKALKCSLKANEGQLFFLEKSVFFLHKPVIYIRHDEIKLIKFLRASSG 407
Query: 387 TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLR 425
R FD I LK+G HTF +I++ E L +F++ K L+
Sbjct: 408 NRFFDLSIILKNGKSHTFLNIDQNESELLSEFLKSKDLK 446
>gi|170063647|ref|XP_001867192.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
gi|167881200|gb|EDS44583.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
Length = 314
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 169/344 (49%), Gaps = 90/344 (26%)
Query: 149 EFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQC 208
EFH ND+A +L+EMRF++P +E A DTDPVEAF++ VM Q SVI A+GDAIA+F +I C
Sbjct: 27 EFHRNDDAPVNLMEMRFHMPISESA-DTDPVEAFQEQVMKQTSVIFASGDAIAIFRKIHC 85
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRG T S T RQ + S P G
Sbjct: 86 LTPRG---------------TTSRCSRASSNCTERRTTLRSRPRQ-YCSCSCCPKRTTGT 129
Query: 269 TRYHFLTLLFNQDETSEMELP-----FSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIV 323
HF+ + D+ +P F+++ELK+KYE KL ELS P YEV+ KIM
Sbjct: 130 RYCHFVG---SADQAGPDAIPLLGDAFTDKELKDKYEDKLTMELSVPVYEVLDKIMNRFN 186
Query: 324 NRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARS 383
RK+T G PL+ S
Sbjct: 187 IRKLT----------------------GVHLPLKN------------------------S 200
Query: 384 GGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGS 443
G IELK+G TFSSIEK LFDFI KKL VKNT K +K+DF +
Sbjct: 201 GCR-----MLIELKTG---TFSSIEK-----LFDFISSKKLNVKNTDKNA---FKQDFAN 244
Query: 444 SDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAES 487
SD+E EPDAYL RVK EA + DD+D + ESTDE F+P+Q ES
Sbjct: 245 SDNENEPDAYLVRVKAEAKKCDDDDSK---ESTDEVFSPNQVES 285
>gi|145516881|ref|XP_001444329.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411740|emb|CAK76932.1| unnamed protein product [Paramecium tetraurelia]
Length = 434
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 34/358 (9%)
Query: 103 SVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPND--EAAESL 160
+G NWG L N + ++PL+ V T KN++ ++ +D E + L
Sbjct: 5 CTKGTNWGVVSIDDKNLCMKYNQSNIIKLPLKKVVNSNTQKNDIVLQLSTDDYGENDDML 64
Query: 161 IEMRFYIP---------------------------TNEIAGDTDPV--EAFKDSVMNQAS 191
E+RFYIP + D +P + ++ ++ +A
Sbjct: 65 CEVRFYIPPQEQKLKQEKEKKKQENEENQISMEEEEDGADEDAEPTFQQKLQNEILTKAK 124
Query: 192 VINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDG 251
+ ++ D+I +++ + PRG+Y + F + HG T+ + + R F LP D
Sbjct: 125 IGQSSADSILTIHDVPLIVPRGKYTMDFFTKDIRFHGNTYQFTTDYKGISRFFLLPMPDE 184
Query: 252 RQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPT 311
FVI L+ P KQGQT Y+FL + F +D +E++L +S Q+L E + +E SGP
Sbjct: 185 INLSFVIGLEHPFKQGQTTYNFLVMQFKKDVENEIKLKYSRQKLDEIGWKGIKEEYSGPL 244
Query: 312 YEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIR 371
Y+++ +++ I K+ P +F+ G + CS +G+++PLE+ I++ KP +HI+
Sbjct: 245 YDIVCEVLAEITGIKVVSPKNFKSKNGLFCLRCSVGPHSGFLFPLEKSLIYLQKPVLHIK 304
Query: 372 FEEIATVNFARSGGS--TRSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVK 427
EEI V F R G + + FD +I K+ FS IE++E L + ++KK+ V+
Sbjct: 305 HEEIKEVIFQRIGSTNLNKFFDVKIVYKNQN-QLFSGIERDELDNLTSYFQQKKIAVR 361
>gi|159462694|ref|XP_001689577.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158283565|gb|EDP09315.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 552
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 179/354 (50%), Gaps = 33/354 (9%)
Query: 1 MTEALE-FQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGT 59
M E ++ F E+ RG + G LK+ + ++ K+ K+ ++ +++ ++W K+
Sbjct: 14 MAEGVQAFGEIWLGGRGGVASGVLKLAPTGLTWRRKQGSKLVEVKKDEIEALSWTKVPRG 73
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKI--DVPEKELSVRGWNWGGTKFIGN 117
L + K G F GF++ ++D + + +T + V E LS G NWGG + G
Sbjct: 74 CQLSVRRKGGPTVNFLGFRDKDLDTLQQYSRTTLALPEGVSEGALSTSGHNWGGVQLRGA 133
Query: 118 VLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAE----SLIEMRFYIPTNE-- 171
L+F V GK++V +E H +D E L E+ FY+P
Sbjct: 134 SLAFLVG-----------------GKDDVMLELHVDDTGGEVAEDMLTELAFYVPPGNED 176
Query: 172 ---IAGDTDPVEAFKDSVM-NQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLH 227
+ P + D+++ + + A + + VF+E+ + PRGR+++++ + QL
Sbjct: 177 FPAQGEEVPPAKVMLDALLPHADTEAAAADEPVCVFSEVGIVAPRGRFEVEMHLGYLQLG 236
Query: 228 GKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEME 287
G++ D+K+ +++ R+F LP + VISLDPPI++GQT Y L F D+ +E
Sbjct: 237 GQSQDFKVRYASIQRIFILPKHNTPHTLVVISLDPPIRKGQTYYAHLLCQFPTDDDISVE 296
Query: 288 LPFSEQELKEKYE---GKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTG 338
L +E+ L K E GKL +++GP +EV AK+++ + +IT PG F+ G
Sbjct: 297 LDITEEALAAKNEKNGGKLSADMTGPVWEVFAKLLRGLSGARITRPGHFKNAAG 350
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKV-- 607
D NAPKK +SA+M + N R+K+K +NPGI+F E+ K GE WK +S++EKA YDE
Sbjct: 480 DPNAPKKNLSAFMYFSNSNRDKVKAENPGIAFGEVGKLLGERWKAMSAEEKAPYDEMAAK 539
Query: 608 NKAKEDYNEALK 619
+KA D A++
Sbjct: 540 DKAGADSTTAVR 551
>gi|145535313|ref|XP_001453395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421106|emb|CAK85998.1| unnamed protein product [Paramecium tetraurelia]
Length = 410
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 202/406 (49%), Gaps = 27/406 (6%)
Query: 103 SVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAES--- 159
S++G NWG LS + PL+ ++ KN++ ++ DE AE+
Sbjct: 5 SLKGTNWGRVNIDDKNLSLSHLTQNVIKFPLKRITNSNIQKNDIVLQL-STDECAENEDM 63
Query: 160 LIEMRFYIP------------TNEIAGD-TDPVEAFKDSVMNQASVINATGDAIAVFNEI 206
L E+RFYIP +NE D ++ ++ ++ +A I + D+I +E+
Sbjct: 64 LCEVRFYIPPKEQKAEKKKQESNEEEQDEISYLQQVQNHIVKKAK-IGGSSDSILTIHEV 122
Query: 207 QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQ 266
+ PRG+Y + F + HG T+ + ++ R F LP D V+ L+ PIKQ
Sbjct: 123 PLIVPRGKYTMDFFKKDIRFHGNTYQFTTDYKSITRFFLLPMPDEVNLSLVVGLENPIKQ 182
Query: 267 GQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRK 326
GQT Y+++ + F +D +++E+ ++ ++L + E SG ++++ I+ I K
Sbjct: 183 GQTAYNYIVMQFRKDLEAQIEMKYTREQLDNIGWKGIRLEYSGSMFDIVCDILSEITGIK 242
Query: 327 ITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS 386
+ P +F+ G + CS +G+++PLE+ ++I KP I+I+ ++I + F R +
Sbjct: 243 VVSPKNFKCKNGLFCLRCSVVPHSGFLFPLEKSLLYIQKPVIYIKHDDIKEIIFQRITQT 302
Query: 387 TRS--FDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSS 444
T++ FD +I K+ H FS++++EE L + KKL+VK K ++ N E +
Sbjct: 303 TQNKFFDIKIVTKNAS-HLFSTVDREELDNLSQYFNSKKLQVK---KIQEEN--EGIKNG 356
Query: 445 DDEKEPDAYLARVKREAAERDDEDDEDEDESTDED-FNPDQAESDV 489
D+ E + + + D D++DED ED +N Q + V
Sbjct: 357 KDDSEDGSQNGNDHKLTLSQMDSDEDDEDFQAQEDSYNSVQFQQKV 402
>gi|240279641|gb|EER43146.1| FACT complex subunit pob3 [Ajellomyces capsulatus H143]
Length = 332
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 41/309 (13%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKET 80
GK K+ + + ++ G ++ ++ W + + L+I ++ + + GF++
Sbjct: 23 GKCKLAESGLGWRPSGGGDTFTLDSSNIGAAQWSRAAKGYELKILSRSSGVIQLDGFEQE 82
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
+ ++ FK + I++ +E ++RGWNWG +F L+F+V N AFEIP ++S
Sbjct: 83 DFERTSKAFKIWYGINLENREHALRGWNWGKAEFTKAELAFNVQNRPAFEIPYSEISNTN 142
Query: 141 -TGKNEVTVEFH-PNDEAA---------------------ESLIEMRFYIPTNEI----- 172
GKNEV VEF P D + L+EMRFYIP +
Sbjct: 143 LAGKNEVAVEFSLPADGVTGANGQLEGSTKNRGRKAGAGRDELVEMRFYIPGTALKKEKP 202
Query: 173 -------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKI 219
A + + F +++M++A + + GD A F ++ LTPRGR+DI +
Sbjct: 203 EGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHLTPRGRFDIDM 262
Query: 220 FNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFN 279
+ S F+L GKT+DYKI ++ + F LP D + LDPP++QGQTRY FL +
Sbjct: 263 YESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITLGLDPPLRQGQTRYPFLVMQLK 322
Query: 280 QDETSEMEL 288
D+ ++L
Sbjct: 323 LDDEISIDL 331
>gi|146165332|ref|XP_001014803.2| Structure-specific recognition protein [Tetrahymena thermophila]
gi|146145543|gb|EAR94676.2| Structure-specific recognition protein [Tetrahymena thermophila
SB210]
Length = 437
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 185/388 (47%), Gaps = 34/388 (8%)
Query: 105 RGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPND--EAAESLIE 162
+G NWG F + L N ++ L+ + T K ++ ++ + D + + L E
Sbjct: 7 KGVNWGNVTFEDDQLVLSHNKRRLCKLSLKKFTNSTVNKTDIVIDLNTVDLQDDEDQLCE 66
Query: 163 MRFYIPTNE--------------------IAGDTDPVEAFKDSVMNQASVINATGDAIAV 202
MR +IP + + G D + + ++ +A + +G +I
Sbjct: 67 MRLFIPQQQDAQMKPEDDGEGEEKEGEDSVGGYADQLNS---EIITKAKIGQYSGQSIVK 123
Query: 203 FNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDP 262
F +I L PRG+Y + ++ + HG +F+Y + S V++ F LP D FV+ LD
Sbjct: 124 FEDISLLVPRGKYQLDMYKKTVRFHGSSFNYIVEYSNVIKGFLLPQPDEVHVAFVLGLDQ 183
Query: 263 PIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVI 322
P+K G T + ++ + F +++ + +++ +E KE LD+E G YE+ ++ K +
Sbjct: 184 PLKIGNTVHSYIVMQFKKEQKANIKVNIDPEEKKEDKLKDLDEEYDGFLYEIAGQLFKTL 243
Query: 323 VNR-KITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFA 381
N +I +P F+ + + C+ K G +YP+ + IFI+KP IHI+ +I V F
Sbjct: 244 CNNVQIIMPAGFQSSDKQNCLKCTLKTHQGLLYPMRKSLIFIYKPVIHIQISDIQKVEFN 303
Query: 382 RSGGST--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNY-- 437
R G +T + FD ++ K+ F E++E L ++ + K +++ + +
Sbjct: 304 RVGNATLNKLFDVKVFTKTTTPQFF-GFERKELDVLLEYFKSKNIKITYDDTNQGATFDD 362
Query: 438 -KEDFGSSDDEKEPDAYLARVKREAAER 464
E+F S E E + R +R++A+R
Sbjct: 363 EDEEFTDSISEDEEEG--KRAQRKSAKR 388
>gi|340503968|gb|EGR30466.1| structure-specific recognition, putative [Ichthyophthirius
multifiliis]
Length = 431
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 168/342 (49%), Gaps = 19/342 (5%)
Query: 103 SVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPND--EAAESL 160
++G NW +F + + + ++PL + T KN++ ++ + D E + L
Sbjct: 7 CLKGINWCNLQFDEDNMVLNYKQKRLCKLPLNKIQNSTVNKNDIVIDLNTLDIKEDEDVL 66
Query: 161 IEMRFYIPTNE--------------IAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEI 206
EMR Y+P + + ++++A + +G +I F ++
Sbjct: 67 CEMRLYVPFQQENQSKEQENEQNEAENQKASRADQLNSEIISKAKIGQYSGASIVKFEDL 126
Query: 207 QCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQ 266
L PRG+Y + +F + + HG +++Y + +++ F LP D FV+ L+ P+K
Sbjct: 127 PLLVPRGKYSLDMFQNSAKFHGSSYNYIVEYKNIIKAFLLPLPDEVNIAFVLGLEQPLKY 186
Query: 267 GQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRK 326
G T + + + F +D ++++ + K+ +L+++ GP YE++ +I K +
Sbjct: 187 GNTVHSSIVMQFRKDIQQQVKVNLDPELKKQSNLKELEEQYEGPLYEIVGQIFKQLCQIP 246
Query: 327 ITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS 386
+ +PG F+ G V C+ K G ++P+++ IFI+KP IH+ +I V F R G +
Sbjct: 247 VIMPGGFQSSDGQCCVKCTLKTHQGMLFPMKKSLIFIYKPVIHVTLTDITKVEFERVGNA 306
Query: 387 T--RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRV 426
+ + FD ++ KS H F E++E KL ++ + K +++
Sbjct: 307 SLNKLFDIKVFTKSSNAH-FIGFERKELDKLLEYFKSKNIQI 347
>gi|227202642|dbj|BAH56794.1| AT3G28730 [Arabidopsis thaliana]
Length = 268
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 137/243 (56%), Gaps = 9/243 (3%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + F +S RG PG LKI I +K + GK +++ D+ V+W K+ +
Sbjct: 1 MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
L + K+G ++F GF++ ++ + SFF++++ EK+LSV G NWG GN L+
Sbjct: 61 QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120
Query: 121 FDVNNTTAFEIPLRDVSQC-TTGKNEVTVEFHPNDEAA----ESLIEMRFYIPTN--EIA 173
F V + AFE+ L DVSQ GKN+VT+EFH +D A +SL+E+ F+IP + +
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180
Query: 174 GDTD--PVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTF 231
GD + P + F D+++ A V DA+ F I LTPRGRY++++ SF +L G+
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAM 240
Query: 232 DYK 234
K
Sbjct: 241 TLK 243
>gi|402470845|gb|EJW04882.1| hypothetical protein EDEG_00102 [Edhazardia aedis USNM 41457]
Length = 455
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 215/434 (49%), Gaps = 28/434 (6%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E ++ EV + L++ + I K KKT +V I ++ + + +
Sbjct: 1 MNEPMDIIEVEDAYLSDQDEVILRMAAEGIAMKTKKTSQVTTIKREEIREIELFRSTQKF 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLS 120
+RI + ++ ++ I F ++ I K+L N G G+ L
Sbjct: 61 NMRIQTTKNTFFNINNIPDSLVENIKDFIFKHYSITAYVKDLEFEAINQGRLGISGDFLE 120
Query: 121 FDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVE 180
F F+I L+++ + KNE+T+ F E S+IE++F I + + ++
Sbjct: 121 FKNKEKLIFDIFLQEIKNVHSMKNELTLSFA---EKNNSVIEVKF------INENPNLID 171
Query: 181 AFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTV 240
K+ + + + I F +Q + PRG+ D + + F++ G T+++K+ S++
Sbjct: 172 EIKERLQKSGGL----NEEIVTFETLQSVVPRGKNDYIFYTNLFKMVGSTYEHKVLYSSI 227
Query: 241 LRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYE 300
+F L KD + F I +DPPI+QGQTRY+F+ L+FN++E + L +E+ K KY
Sbjct: 228 KNVFML-EKDLNEVFAAIHIDPPIRQGQTRYNFVVLIFNKEELEDFSLKLTEEN-KLKY- 284
Query: 301 GKLDKELSGPTYEVMAKIMKVIVNRKITVPGS--FRG-HTGTSAVTCSYKAAAGYIYPLE 357
+L + SGP YE ++ +V+ K + S FR T ++ CS KA G++YPLE
Sbjct: 285 PQLKETYSGPVYETFIDVLCHVVSPKTNIIRSTEFRTLSTNKGSLKCSLKAFDGHLYPLE 344
Query: 358 RGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIEL--KSGVLHTFSSIEKEEY 412
+F+ K I++ +EI V F+R S + ++FD ++ KS + F++I KE++
Sbjct: 345 NCLLFLPK-AIYMPLKEIILVEFSRINVSSFAAKTFDMKVTTVDKS---YMFNTIAKEDF 400
Query: 413 GKLFDFIREKKLRV 426
G L + KK++V
Sbjct: 401 GPLEQYFGSKKVKV 414
>gi|378755342|gb|EHY65369.1| hypothetical protein NERG_01815 [Nematocida sp. 1 ERTm2]
Length = 489
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 211/464 (45%), Gaps = 64/464 (13%)
Query: 57 VGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG 116
V + ++I ++ G++H G ++ I + K ++K+++ K L V G G +
Sbjct: 56 VVSHTIKILIQGGNMHIVDGVTAEHVENIKQYVKKHYKLNIYHKALCVEGNVHGQVEVQD 115
Query: 117 NVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNE--IAG 174
+ F V N + F++PL +S K E ++ E + E+RF E +A
Sbjct: 116 MAVGFKVQNKSIFDVPLEAISNAYERKGEGIIDI---KETYFGVSEIRFGCLKEESNVAQ 172
Query: 175 DTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYK 234
D +++ S NQ + + +E+ + PRG+Y I + L GK + ++
Sbjct: 173 LVDLIKS-TTSGSNQLEIFS--------IDEVTSILPRGKYKITLTAGGMHLIGKRYSHQ 223
Query: 235 IPISTVLRMFTLPH--KDG--RQNFFVISLDPPIKQGQTRYHFLTLLFNQDET------- 283
I + + RMF L ++G ++ + L P++QGQTRYHF+ LL ++++
Sbjct: 224 IQFNAISRMFYLERSTEEGVDEMSYLIFELSTPVRQGQTRYHFVNLLISEEKVKMVVGKN 283
Query: 284 -------SEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGH 336
E ELP E+E K + + G E + +++ + GSF
Sbjct: 284 TVIQSPEEEAELPIDEEEKKRIEDAGISYVQEGSLSECVVNMVEKLSGIAAMHTGSFSMS 343
Query: 337 TGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTR---SFDFE 393
TG A+ CS KA GY+YPL++GF+F+ + ++I ++ I TV F+R S+R +FD
Sbjct: 344 TGGKALRCSLKANEGYLYPLKKGFLFVPQ-IVYIEYDLIKTVEFSRVNLSSRTAKTFDVR 402
Query: 394 IELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAY 453
+ +K + F+ I+K EY L ++ +K++ N
Sbjct: 403 VIMKDKKEYMFNGIQKVEYNALETYLAKKEINCLN-----------------------EV 439
Query: 454 LARVKREAAERDDEDDEDEDESTDEDFN-----PDQAESDVAEE 492
L V A +DED+E ++T D + +Q ES V EE
Sbjct: 440 LNEVWAAAPSDEDEDEETASDTTSGDLSEETDETEQNESAVPEE 483
>gi|10179001|emb|CAC08510.1| SSRP1-like protein [Zygosaccharomyces rouxii]
Length = 542
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 149/269 (55%), Gaps = 7/269 (2%)
Query: 180 EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIST 239
EAF + + +A + +GD+I F ++ TPRGRYDI I+ + +L GKT++YK+
Sbjct: 276 EAFHEELKEKADIGEVSGDSIVSFQDVFFATPRGRYDIDIYKNSIRLRGKTYEYKLQHRQ 335
Query: 240 VLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKY 299
+ + +LP + +I + T +T F +DE + +++ + Y
Sbjct: 336 IPKDRSLPKAMILPSSGLIHRTTITQGQTTTLPCIT--FQKDERQRC-IDLEDEDFEANY 392
Query: 300 EGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
+ +L +E T+ V++ ++K + R++ VPG ++ AV+CSYKA GY+YPL+
Sbjct: 393 KDRLKREYDAKTHIVVSHVLKGLTGRRVMVPGEYKSKYDQCAVSCSYKANEGYLYPLDNA 452
Query: 360 FIFIHKPPIHIRFEEIATVNFARSG---GSTRSFDFEIELKSGV-LHTFSSIEKEEYGKL 415
F F+ KP ++I F ++++VN +R+G S+R+FD E+ L+ TF++I KEE L
Sbjct: 453 FFFLTKPTLYIPFMDVSSVNISRAGQASTSSRTFDLEVTLRGNRGSTTFANISKEEQQLL 512
Query: 416 FDFIREKKLRVKNTGKGEKPNYKEDFGSS 444
F++ + LRVKN K + + GSS
Sbjct: 513 EQFLKSRNLRVKNEDKEAQERLQSALGSS 541
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 21 GKLKITDQNIVFKNKKTG--KVEQINGP------DLDFVNWQKLVGTWALRIFLKNGSLH 72
G+ +I D + +K+ G Q P +L V W + + L++ KN +
Sbjct: 45 GRFRIADSGLGWKSANAGGSAANQSKQPFLLPATELSTVQWSRGCRGFELKVNTKNQGVV 104
Query: 73 RFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIP 132
+ GF + + I + F F + V KE S+RGWNWG N + F +N +FE+P
Sbjct: 105 QLDGFAPDDFNLIKNDFHRRFNVQVEPKEHSLRGWNWGKADLARNEMVFALNGRPSFEVP 164
Query: 133 LRDVSQCT-TGKNEVTVEFHPNDE----AAESLIEMRFYIP---TNE 171
++ T K EV +EF+ DE A + L+EMR Y+P TNE
Sbjct: 165 YARINNTNLTSKTEVAIEFNLADENYQPAGDELVEMRLYVPGTVTNE 211
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 153/303 (50%), Gaps = 27/303 (8%)
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFAR--SGGST- 387
G FR AV S KA G +YPLE+ F F+ KPP I EEI V F R +GGS
Sbjct: 1 GKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 60
Query: 388 RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDE 447
FD I LK+ H F +I++ EY LFDFI K L++ N G + + DD+
Sbjct: 61 HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDD 120
Query: 448 KEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSD 507
D +L R++ EA DES +ED SD + D +PTD D
Sbjct: 121 DAVDPHLERIRNEAGG---------DESDEED-------SDFVADKDDGGSPTDDSGGDD 164
Query: 508 ASEGTKKKKKEK-----SRKTITISEKPRKSKKDKESSGGSTKRKKK---DKNAPKKPMS 559
+ +KEK ++K + S+ P K K + + GS K+K+K D NAPK+ +S
Sbjct: 165 SDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAIS 224
Query: 560 AYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALK 619
+M + RE IKK NPGISFTE+ + G+ W +S++EK Y+ K K+ Y E +
Sbjct: 225 GFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEIS 284
Query: 620 AYK 622
YK
Sbjct: 285 GYK 287
>gi|70927509|ref|XP_736131.1| structure specific recognition protein [Plasmodium chabaudi
chabaudi]
gi|56510406|emb|CAH76375.1| structure specific recognition protein, putative [Plasmodium
chabaudi chabaudi]
Length = 273
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 152/278 (54%), Gaps = 12/278 (4%)
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
GF + + +I + F I + ++L+ +GWNWG K + L FD++ AF I +
Sbjct: 2 GFPDRNLAEITQHXQKYFNIKLGNRKLATKGWNWGEFKLENSNLIFDIDKKYAFNINTNN 61
Query: 136 VSQCTTG-KNEVTVEFHPNDEAAES-----LIEMRFYIPTNEIAGDTDPVEAFKDSVMNQ 189
++Q K ++ +E NDE ++ L E+RFY P + + K++++++
Sbjct: 62 INQLNVQIKTDIAIEL-KNDENKQNTNEDVLSEIRFYYPHEN--DENQNFQDLKNNLLDK 118
Query: 190 ASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHK 249
++ ++ + IA + I L PRGRY+I++++ F+LHGK++D+ + S + +M +P
Sbjct: 119 VNIGDSKSECIASLSNIPLLVPRGRYEIELYSKTFKLHGKSYDFTVQYSNINKMLLVPKT 178
Query: 250 DGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSG 309
+ Q + SL+ IKQGQT Y F+ + N D+ ++++ E+++K KL+K L+G
Sbjct: 179 NSNQYILIFSLNNKIKQGQTEYPFILIQLNNDDDMDLDINAPEEDIKNY---KLEKTLTG 235
Query: 310 PTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYK 347
Y+V+ ++ + + +PG +R +TCSY+
Sbjct: 236 KAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYR 273
>gi|440493779|gb|ELQ76206.1| Nucleosome-binding factor SPN, POB3 subunit [Trachipleistophora
hominis]
Length = 451
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 204/400 (51%), Gaps = 32/400 (8%)
Query: 23 LKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNG--SLHRFAGFKET 80
LK+ D+ I KN + G + I D+ + + + +RI K +++ K
Sbjct: 33 LKLADKGIAMKNIENGAITTIKKDDIHRIELYRGTRLYNMRITTKTKIFNINNILEEKIE 92
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
EI K+C + + I+V K L + G F + L + + F++PL+DV
Sbjct: 93 EIKKVCGHW---YSINVYVKPLEIVDTTKGKVTFSEDYLEYR-TDKLIFDVPLKDVVSVC 148
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAI 200
+ KNE + F D+ + +IEMR +P E F ++ ++ + +I
Sbjct: 149 SVKNEAVLGFDC-DKEFDGVIEMRLSVPD----------ENFVKNLRERSEI--GQVKSI 195
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
F + ++PRG+ D ++ ++ G+T+++K+ S++ ++ L + +I++
Sbjct: 196 ITFETLNNVSPRGKSDYIFSENYIRILGRTYEHKVLYSSIKKIIVLEQEKVVN--IIINV 253
Query: 261 DPPIKQGQTRYHFLTLLFNQ--DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKI 318
DP IKQGQTRY+F+ LLF + DE E+EL + +L+ KY L+++ +G YE KI
Sbjct: 254 DPSIKQGQTRYNFINLLFEKGIDEDFELEL---DSDLRSKYPS-LEEKYNGELYETFIKI 309
Query: 319 MKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATV 378
+++ +++ V F+ T ++C+ +A G+++P+ IF+ K I++ EI V
Sbjct: 310 IELFTKQRVQVSECFKTRTNQIFLSCALRALEGFLFPISDAVIFLPK-VIYMPHREIRLV 368
Query: 379 NFAR---SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKL 415
F R S +++SFD +I + + FSSI+K+E+G L
Sbjct: 369 EFYRVDVSVMTSKSFDMKI-ITYDSSYLFSSIDKDEFGAL 407
>gi|407035559|gb|EKE37743.1| structure-specific recognition protein [Entamoeba nuttalli P19]
Length = 376
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 183/358 (51%), Gaps = 16/358 (4%)
Query: 97 VPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE 155
+ EKE V G+NWG N + + F++ +D ++ + + K EV++EF + +
Sbjct: 1 MQEKEYCVSGFNWGRIDIDKNSVQLTHDGHLIFKMNPKDFTKSSISNKTEVSIEF-DDSK 59
Query: 156 AAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
++L E++F+ P E D D D + + + NA G + +F I L+P+G Y
Sbjct: 60 DGDALSEIKFFAPQTEQQNDKDNATELYDKIA-EVTPTNAAGKEVCLFENIGFLSPKGHY 118
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
D+KI+ ++ KT+D+KI + R + L KD +FF+++L P+K+G++ Y L
Sbjct: 119 DVKIYEDSVRVQNKTYDFKINYRDIARYYKL-RKDEDTSFFILNLSNPLKKGKSVYECLV 177
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGK--LDKELSGPTYEVMAKIMKVIVNRKITVPGSF 333
+ E S E +E L +++E K L++ ++ ++ ++ + + N I G
Sbjct: 178 M-----ELSSNEEVTAELHLTKEFEDKTGLEESMTDNELDLFVELFRSLCNVPIISSGHK 232
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS--TRSFD 391
+ + C+ G+++P+ FIF+ K I F++I +V+ R S ++FD
Sbjct: 233 FKTNDSHFLKCNLSTNEGFLFPMSDSFIFVFKRIRIIMFKDIKSVDILRMNASNDNKTFD 292
Query: 392 FEIELKS--GVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDE 447
F I LK G L F+ + + EY L +++E +L+++ T + + +ED S D++
Sbjct: 293 FVINLKGRRGSLQ-FTGMNRNEYENLVGYLKESQLKLEETLQNTERRMEEDDDSGDND 349
>gi|67471840|ref|XP_651832.1| structure specific recognition protein [Entamoeba histolytica
HM-1:IMSS]
gi|56468614|gb|EAL46446.1| structure specific recognition protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706649|gb|EMD46453.1| structure specific recognition protein, putative [Entamoeba
histolytica KU27]
Length = 376
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 183/358 (51%), Gaps = 16/358 (4%)
Query: 97 VPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE 155
+ EKE V G+NWG N + + F++ +D ++ + + K EV++EF + +
Sbjct: 1 MQEKEYCVSGFNWGRIDIDKNSVQLTHDGYLIFKMNPKDFTKSSISNKTEVSIEF-DDSK 59
Query: 156 AAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
++L E++F+ P E D D D + + + NA G + +F I L+P+G Y
Sbjct: 60 DGDALSEIKFFAPQTEQQNDKDNATELYDKIA-EVTPTNAAGKEVCLFENIGFLSPKGHY 118
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
D+KI+ ++ KT+D+KI + R + L KD +FF+++L P+K+G++ Y L
Sbjct: 119 DVKIYEDSVRVQNKTYDFKINYKDIARYYKL-RKDEDTSFFILNLSNPLKKGKSVYECLV 177
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGK--LDKELSGPTYEVMAKIMKVIVNRKITVPGSF 333
+ E S E +E L +++E K L++ ++ ++ ++ + + N I G
Sbjct: 178 M-----ELSSNEEVTAELHLTKEFEDKTGLEESMTDNELDLFVELFRSLCNVPIISSGHK 232
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS--TRSFD 391
+ + C+ G+++P+ FIF+ K I F++I +V+ R S ++FD
Sbjct: 233 FKTNDSHFLKCNLSTNEGFLFPMSDSFIFVFKRIRIIMFKDIKSVDILRMNASNDNKTFD 292
Query: 392 FEIELKS--GVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDE 447
F I LK G L F+ + + EY L +++E +L+++ T + + +ED S D++
Sbjct: 293 FVINLKGRRGSLQ-FTGMNRNEYENLVGYLKESQLKLEETLQNTERRMEEDDDSGDND 349
>gi|219116578|ref|XP_002179084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409851|gb|EEC49782.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 160
Score = 140 bits (352), Expect = 3e-30, Method: Composition-based stats.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
Query: 209 LTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQ 268
LTPRGRY I++++ F +L G+ +DYKI + R+F LP D FVI+LD PI+QGQ
Sbjct: 1 LTPRGRYSIELYDYFLRLRGQKYDYKIKYDDINRLFLLPKPDEVHMAFVIALDKPIRQGQ 60
Query: 269 TRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKIT 328
RY +L L + E E+ + E+ LK +Y G+L + G ++AK KVI +K+
Sbjct: 61 QRYQYLVLQATK-EPDEVTVNLDEETLKNEYGGELQPVMRGSLSNLVAKTFKVIAKKKVF 119
Query: 329 VPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI 368
+PG F + V C+ +A G +YPLE+ F+FIHKPPI
Sbjct: 120 IPGKFSNAAQQACVKCAVRANEGLLYPLEKQFVFIHKPPI 159
>gi|167381161|ref|XP_001735599.1| FACT complex subunit SSRP1-A [Entamoeba dispar SAW760]
gi|165902333|gb|EDR28189.1| FACT complex subunit SSRP1-A, putative [Entamoeba dispar SAW760]
Length = 378
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 176/340 (51%), Gaps = 16/340 (4%)
Query: 97 VPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDE 155
+ EKE V G+NWG K + + + F++ +D ++ + + K EV++EF + +
Sbjct: 1 MQEKEYCVSGFNWGRIKIDKSSVQLTHDGYLIFDMNPKDFTKSSISNKTEVSIEF-DDSK 59
Query: 156 AAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRY 215
++L E++F+ P E D D D + + + NA G + +F I L+P+G Y
Sbjct: 60 DGDALSEIKFFAPQTEQQNDKDNATELYDRIA-EVTPTNAAGKEVCLFENIGFLSPKGHY 118
Query: 216 DIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLT 275
D+KI+ ++ KT+D+KI ++R + L KD +FF+++L P+K+G++ Y L
Sbjct: 119 DVKIYEDSVRVQNKTYDFKINYKDIVRYYKL-RKDEDTSFFILNLSNPLKKGKSIYECLV 177
Query: 276 LLFNQDETSEMELPFSEQELKEKYEGK--LDKELSGPTYEVMAKIMKVIVNRKITVPGSF 333
+ E S E +E L +++E K L++ ++ ++ ++ + + N I G
Sbjct: 178 M-----ELSSNEEVTAELHLTKEFENKTGLEESMTDNELDLFVELFRSLCNVPIISSGHK 232
Query: 334 RGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS--TRSFD 391
+ + C+ G+++P+ FIF+ K I F++I +V+ R S ++FD
Sbjct: 233 FKTNDSHFLKCNLSTNEGFLFPMSDSFIFVFKRIRIIMFKDIKSVDILRMNASNDNKTFD 292
Query: 392 FEIELKS--GVLHTFSSIEKEEYGKLFDFIREKKLRVKNT 429
F I LK G L F+ + + EY L +++E +L+++ T
Sbjct: 293 FVINLKGRRGSLQ-FTGMNRNEYENLVGYLKESQLKLEET 331
>gi|440291756|gb|ELP84998.1| FACT complex subunit SSRP1-A, putative [Entamoeba invadens IP1]
Length = 371
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 182/361 (50%), Gaps = 26/361 (7%)
Query: 100 KELSVRGWNWGGTKFIGNVLSFDVNNTTAFEI-PLRDVSQCTTGKNEVTVEFHPNDEAAE 158
K SV G+NWG + N + ++ F+ P + + K EV+VEF D+A +
Sbjct: 2 KSYSVAGFNWGKLEVTPNSVDMLHDDQLIFQTDPKKFTKSSLSNKTEVSVEF---DDAGD 58
Query: 159 S--LIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYD 216
L E+RF+ P E + D D V + + NA+G + +F + L+P+G YD
Sbjct: 59 GDVLTEIRFFAPQTEQQNEKDNATELYDKVA-EVTPSNASGKEVCLFENVAFLSPKGHYD 117
Query: 217 IKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTL 276
+KI+ ++ TFD+KI + + +++ KD +FFV+SL P K+G++ Y L +
Sbjct: 118 VKIYEDSVRVQNNTFDFKIKYTDI-QLYYKMRKDNETSFFVLSLSNPFKKGKSVYECLIM 176
Query: 277 LFNQDETSEMELPFSEQELKEKYEGK--LDKELSGPTYEVMAKIMKVIVNRKITVPGSFR 334
E S E +E L + +E K L+ ++ ++ ++ K + IT P +
Sbjct: 177 -----ELSTTEEITAELNLTKDFEKKTGLEASMTDNELDLFIELFKSLHPTTIT-PSGMK 230
Query: 335 GHTGTSA-VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS--TRSFD 391
TG S + C+ G++YP+ FIF++K F+EI +V+ R + ++FD
Sbjct: 231 FKTGDSHYIKCNMSTNEGFLYPMTDCFIFLYKRIKIAPFKEINSVDILRMNAANDNKTFD 290
Query: 392 FEIELKS--GVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKG---EKPNYKEDFGSSDD 446
++LK G L F+ + +E Y L +F+++ L+++ T KG E N ED G +D+
Sbjct: 291 LLLDLKGRKGTLQ-FNGMSREVYDDLVEFLKQSGLKLEETAKGATKENANV-EDSGDNDE 348
Query: 447 E 447
E
Sbjct: 349 E 349
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 128/211 (60%), Gaps = 18/211 (8%)
Query: 416 FDFIREKKLRVKNTG--KGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDDEDED 473
DF+ KKL +KN G +G K +Y E S DE + DAYL R+K E R++ ++ D
Sbjct: 4 VDFVNAKKLNIKNRGLKEGMKQSYDEYADS--DEDQHDAYLERMKEEGKIREENANDSSD 61
Query: 474 ---ESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKP 530
E TDE FNP + + DVAEE+DSN + + S D D+ G KK K + I KP
Sbjct: 62 GSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK---KAKIVKDRKP 118
Query: 531 RKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
RK K ES G KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE
Sbjct: 119 RK--KQVESKKG------KDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGE 170
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
LWK +S ++K E+D K AK DY +A+K Y
Sbjct: 171 LWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 201
>gi|387592245|gb|EIJ87269.1| hypothetical protein NEQG_02604 [Nematocida parisii ERTm3]
gi|387597414|gb|EIJ95034.1| hypothetical protein NEPG_00559 [Nematocida parisii ERTm1]
Length = 490
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 57 VGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG 116
V + L+I ++NG++H G ++ I + K ++K+++ K L V G N GT +
Sbjct: 56 VISHTLKIVIQNGAVHIIDGITAEHLENIKQYAKKHYKLNIYHKSLCVEG-NVHGTIELQ 114
Query: 117 NV-LSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGD 175
NV L F N F++PL +S K E ++ +E + E+RF E +
Sbjct: 115 NVSLEFKSQNNAIFDVPLEAISNAYERKGEGIIDI---NETYFGVSEIRFG-SLKEESNV 170
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFN--EIQCLTPRGRYDIKIFNSFFQLHGKTFDY 233
V+ K S + D + +F+ E+ + PRG+Y I + +S+ L GK + +
Sbjct: 171 VQLVDLIKSSTVGS--------DQLEIFSIDEVTSILPRGKYKITLTSSYIHLIGKRYSH 222
Query: 234 KIPISTVLRMFTLPH--KDG--RQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL- 288
++ S++ R+F L ++G ++ + L+ P++QGQTRYHF+ LL +E +M L
Sbjct: 223 QMLYSSISRLFYLERNAEEGVEEMSYLIFELNTPVRQGQTRYHFVNLLV-PEEKVKMILG 281
Query: 289 -------------PFSEQELKEKYEGK-----LDKELSGPTYEVMAKIMKVIVNRKITVP 330
P + E K K E + + LSG +++ K+ + K
Sbjct: 282 KNSTIIYPEDEEEPPVDPEEKRKIEERGIDYIQEGTLSGCVVDMVEKLSGI----KAMNT 337
Query: 331 GSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPI-HIRFEEIATVNFARSGGSTR- 388
G+F G A+ CS KA GY+YPL+ GF+F+ P I +I + I TV F+R S+R
Sbjct: 338 GTFATFAGGKALKCSLKANEGYLYPLKNGFLFV--PQIVYIEYNHIKTVEFSRVNLSSRT 395
Query: 389 --SFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
+FD + L + F+ I+K +Y L ++ +K + N
Sbjct: 396 AKTFDVRVILLDKKEYMFNGIQKVDYNALETYLGKKDVNCLN 437
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Query: 176 TDPV---EAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFD 232
T PV +AF +V+++A VI ATGDAI +F E+QCLTPRGRYDI+I+ F LHGKTFD
Sbjct: 33 TKPVPETKAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPPFLHLHGKTFD 92
Query: 233 YKIPISTVLRMFTLPHKDGRQNFFV 257
YKIP +TVLR+F LPHKD RQ FFV
Sbjct: 93 YKIPYTTVLRLFLLPHKDQRQMFFV 117
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+K KD NAPK+PMSAYM+W N REKIK D+PGIS T+++KK GE+WK ++ ++K E+D
Sbjct: 119 KKGKDPNAPKRPMSAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMTKEKKEEWDR 178
Query: 606 KVNKAKEDYNEALKAYKESGGG-------------QDSDDGKTSKSKKPAKKKETASTAV 652
K +AK +Y +A+K Y E G G + + + AS+ +
Sbjct: 179 KAEEAKREYEKAMKEYSEGGRGDAPSKKDKSKKKKKGKVKVEKKSTPSKGSSASKASSKL 238
Query: 653 SPHKVKSKEFIESNGSSS-DSDDDKKASSKRKRDSDEDSKAKTKKKKEKSESESD 706
KS+EF+ S+ SSS ++ ++ R DS+E+ A T E+S S SD
Sbjct: 239 LSESFKSREFVSSDESSSGENKEEDDGPPFRNGDSEEEEAASTPPSSEESASGSD 293
>gi|70917816|ref|XP_732984.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504359|emb|CAH84175.1| hypothetical protein PC300891.00.0 [Plasmodium chabaudi chabaudi]
Length = 202
Score = 129 bits (323), Expect = 8e-27, Method: Composition-based stats.
Identities = 64/206 (31%), Positives = 122/206 (59%), Gaps = 5/206 (2%)
Query: 163 MRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNS 222
+RFY P + + K++++++ ++ ++ + IA + I L PRGRY+I++++
Sbjct: 1 IRFYYPHEN--DENQNFQDLKNNLLDKVNIGDSKSECIASLSNIPLLVPRGRYEIELYSK 58
Query: 223 FFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDE 282
F+LHGK++D+ + S + +M +P + Q + SL+ IKQGQT Y F+ + N D+
Sbjct: 59 TFKLHGKSYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLNNDD 118
Query: 283 TSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAV 342
++++ E+++K KL+K L+G Y+V+ ++ + + +PG +R +
Sbjct: 119 DMDLDINAPEEDIKNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGI 175
Query: 343 TCSYKAAAGYIYPLERGFIFIHKPPI 368
TCSY+AA+G +YPL + F+F+ KP I
Sbjct: 176 TCSYRAASGQLYPLNKYFLFVVKPVI 201
>gi|429964514|gb|ELA46512.1| hypothetical protein VCUG_02004 [Vavraia culicis 'floridensis']
Length = 442
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 196/398 (49%), Gaps = 28/398 (7%)
Query: 23 LKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTWALRIFLKNG--SLHRFAGFKET 80
L++ D+ + KN +G + I D+ + + +++RI K +++ K
Sbjct: 24 LRLADKGMAMKNLDSGAITTIKKDDIHRIELYRGTRLYSMRITTKTKIFNINNILEEKIE 83
Query: 81 EIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCT 140
EI K+C + + I+V K L + G F + L + + F++ L+D+
Sbjct: 84 EIKKVCGHW---YSINVYVKPLEIVDTTKGKVTFSDDYLEYR-TDKLIFDVSLKDIVSVC 139
Query: 141 TGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAI 200
+ KNE + F D+ + +IEMR +P + + + S I I
Sbjct: 140 SVKNEAVLGFDC-DKEFDGVIEMRLGVPDENFVKN-----------LRERSEIGQVKSII 187
Query: 201 AVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISL 260
A F + ++PRG+ D ++ ++ G+T+++K+ S++ R+ L + +I++
Sbjct: 188 A-FETLNNVSPRGKSDYIFSENYIRVLGRTYEHKVLYSSIKRIVVLEQEKVVN--IIINV 244
Query: 261 DPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMK 320
DP IKQGQTRY+F+ LLF + + E+ + +L+ KY L ++ +G +E +I++
Sbjct: 245 DPSIKQGQTRYNFINLLFEKGIVEDFEVEL-DDDLRSKY-PTLKEKYTGELHETFIEIIE 302
Query: 321 VIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNF 380
+ +K+ V F+ ++C+ +A G ++P+ IF+ K I++ EI V F
Sbjct: 303 LFTRQKVQVSEGFKTKANQIFLSCALRALEGLLFPIADAVIFLPK-VIYMPHREIRLVEF 361
Query: 381 AR---SGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKL 415
R S +++SFD +I + + FSSI+K+E+G L
Sbjct: 362 YRVDVSVMTSKSFDMKI-ITYDTAYLFSSIDKDEFGAL 398
>gi|300123607|emb|CBK24879.2| unnamed protein product [Blastocystis hominis]
Length = 313
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 53 WQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGT 112
W K+ + LR+ L +G+ RF GFK ++ D + F K+ FKID+ + L G NWG
Sbjct: 48 WCKVGSRFQLRLVLGSGTFSRFDGFKRSDYDALSPFLKSVFKIDLKDDVLGSDGVNWGTI 107
Query: 113 KFIG-----NVLSFDVNNTTAFEIPLRDVSQCT-TGKNEVTVEFHPNDEAA---ESLIEM 163
F G +V+ D FE+ L ++SQC KNEV ++F D + ESL+ +
Sbjct: 108 DFEGPEGEESVVMKDTEGRRLFELGLNELSQCAFPSKNEVELQFVEEDTSKTTEESLVTV 167
Query: 164 RFYIP--TNEIAGDTDPVEA--FKDSVMNQASVINATGDAIAVFNEI--QCLTPRGRYDI 217
RFY+P +E + D A + ++ +A ++N G+ IA ++ Q +TPRGRY +
Sbjct: 168 RFYVPQSASEDVNEKDDTAAHRLQKQILERAVLVNNNGNMIAEIDDRLGQFVTPRGRYMM 227
Query: 218 KIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLL 277
+ ++++ +++G + YKI T+ ++ D V L P++QGQ Y L +L
Sbjct: 228 EFYDNYMRMNGNNYTYKILYKTISCIYMFEQPDLAHRALVFCLTRPLRQGQQTYPHL-VL 286
Query: 278 FNQDETSEMELPFSE 292
+ E + L SE
Sbjct: 287 YAPTERYSLSLSLSE 301
>gi|391335140|ref|XP_003741955.1| PREDICTED: FACT complex subunit SSRP1-like [Metaseiulus
occidentalis]
Length = 142
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 81/131 (61%), Gaps = 33/131 (25%)
Query: 298 KYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLE 357
KYEGKL+KE+SGP +E + +I+K V RKIT PG+ + GT A+TC+YK++ G +YPLE
Sbjct: 44 KYEGKLEKEMSGPVFETLGRIVKAAVQRKITTPGNHKSMNGTPAITCTYKSSYGLLYPLE 103
Query: 358 RGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEKEEYGKLFD 417
+GF ++HKPP+H+RFEEI+ +EYG++++
Sbjct: 104 KGFTYVHKPPVHVRFEEIS---------------------------------DEYGRVYE 130
Query: 418 FIREKKLRVKN 428
F++ KKL++ N
Sbjct: 131 FVKSKKLKIGN 141
>gi|401827029|ref|XP_003887607.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon hellem
ATCC 50504]
gi|392998613|gb|AFM98626.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon hellem
ATCC 50504]
Length = 423
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 174/378 (46%), Gaps = 45/378 (11%)
Query: 57 VGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG 116
V +RIF +++ + ID++ F F++ + KEL + G G
Sbjct: 54 VRKMTIRIF--GDTVYEINNVDQNYIDELKRMFSEYFRVSLYVKELEIADVLCGELGING 111
Query: 117 N-VLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGD 175
L F N T FE+P+ D+ +NE++V +E+RF +
Sbjct: 112 QKALEFR-NTKTIFEVPVEDIESVVDIRNEISVSLKD--------VEIRF-------VSN 155
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
+E K+ + + D I + PRG++++ F + +L G ++D+KI
Sbjct: 156 KKAIEEIKEGCSS------SVDDEIFKMEGLSLSYPRGKFNLIFFRDYLRLVGSSYDHKI 209
Query: 236 PISTVLRMFTLPHKDGR--QNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
+V +++ L R + + VI +DPPI+QGQTRY ++ + F+ +E E+ ++
Sbjct: 210 YYKSVKQLYMLEKGYIRDEERYAVIYVDPPIRQGQTRYDYIVVSFDD---TECEVSADDE 266
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYI 353
LK KE SG V +++M+ + + T +F G + C+ KA G +
Sbjct: 267 RLK--------KEYSGLYSSVFSEVMEALCVIRAT-KSTFESRDGMRCLRCAIKAYEGQL 317
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIEKE 410
YPLE +F+ K I + EI+ V F+R S ++FD + + +TF+ I K+
Sbjct: 318 YPLEDCMLFLPK-AIRLGLNEISLVEFSRINLSSMQAKTFDMTLFCEGS--YTFNGISKD 374
Query: 411 EYGKLFDFIREKKLRVKN 428
E+G L + K ++ ++
Sbjct: 375 EFGMLEQYFHSKGVKARS 392
>gi|19074524|ref|NP_586030.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|19069166|emb|CAD25634.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449329533|gb|AGE95804.1| structure-specific recognition protein [Encephalitozoon cuniculi]
Length = 425
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 47/376 (12%)
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGN-V 118
A+R+F +++ + ID++ F F+I + KEL + G G
Sbjct: 57 MAIRVF--GNAVYEINNVDQNYIDELKRIFSEYFRITLYVKELEIADVLCGELGINGQKA 114
Query: 119 LSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDP 178
L F N T FEIP+ D+ +NE++V +E+RF D
Sbjct: 115 LEFR-NTKTIFEIPVDDIESVVDIRNELSVSLRD--------MEIRF-------VSDRKT 158
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
+E K ++ D I + PRG+++ F + +L G ++D+KI
Sbjct: 159 IEEIK------GGCSSSVDDEILKMEGLSLAYPRGKFNFIFFRDYLRLVGSSYDHKIYYK 212
Query: 239 TVLRMFTLPH---KDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQEL 295
++ ++ L +DG + + VI DPPI+QGQTRY + + F+ E EL S++ L
Sbjct: 213 SIKMLYVLEKGYIRDG-ERYVVIGADPPIRQGQTRYDHVVVAFDD---VERELSVSDERL 268
Query: 296 KEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYP 355
K +Y G L E+ A++M+ + K V SF G + C+ KA G +YP
Sbjct: 269 KGEYSGLLS--------EIFAEVMEALCVIK-AVRSSFESRDGMRCLRCAMKAYEGQLYP 319
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIEKEEY 412
L+ +F+ K + + EI+ V F+R S ++FD + + +TF+ + K+E+
Sbjct: 320 LDDCMLFLPK-AVRLDLGEISLVEFSRINLSSMQAKTFDMTLFCEGP--YTFNGLSKDEF 376
Query: 413 GKLFDFIREKKLRVKN 428
G L + K ++ ++
Sbjct: 377 GALEQYFHGKGIKARS 392
>gi|303389977|ref|XP_003073220.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302365|gb|ADM11860.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
intestinalis ATCC 50506]
Length = 423
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 47/392 (11%)
Query: 57 VGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG 116
V A+RIF +++ + ID++ F FK+ + KEL + G G
Sbjct: 54 VRKMAIRIF--GSTVYELNNVDQNYIDELKRMFSEYFKVSLYVKELEIVDVLSGELGING 111
Query: 117 N-VLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGD 175
L F N T EIP+ D+ KNE++V +E+RF +
Sbjct: 112 QRALEFR-NTKTILEIPVEDIESVVDIKNELSVSLKD--------VEIRF-------ISN 155
Query: 176 TDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKI 235
+E K+ + + D I + PRG++++ F + +L G ++D+KI
Sbjct: 156 KKTIEGVKEGCSS------SVDDEIFKMEGLSFAYPRGKFNLIFFRDYLRLVGSSYDHKI 209
Query: 236 PISTVLRMFTLPHKDGRQN--FFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQ 293
++ +++ L R + V+ +DPPI+QGQT+Y + + F+ SE E+ S++
Sbjct: 210 YYKSIKQLYVLEKGYIRDEDKYAVVCVDPPIRQGQTKYDCIVVSFDD---SEGEISASDE 266
Query: 294 ELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYI 353
LKE+Y SG E+ +++M+ + K +V +F G + C+ KA G +
Sbjct: 267 RLKEEY--------SGLFSEIFSEVMEALCVTK-SVRSAFESRDGMRCLRCAMKAYEGQL 317
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIEKE 410
YPLE +F+ K + + EI+ V F+R S ++FD + + + FS + K+
Sbjct: 318 YPLEDCVLFLPK-AVKLDLSEISLVEFSRINLSSMQAKTFDMTLFCEGP--YAFSGLSKD 374
Query: 411 EYGKLFDFIREKKLRVKN--TGKGEKPNYKED 440
E+G L + K ++ ++ G +++ED
Sbjct: 375 EFGLLEQYFHSKGIKARSEVIDDGASSDFEED 406
>gi|403224274|dbj|BAM42404.1| structure-specific recognition protein 1 [Theileria orientalis
strain Shintoku]
Length = 934
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 55/223 (24%)
Query: 264 IKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGP------------- 310
++QGQTRY ++ + F D ++++L E ++K+ KLDK L G
Sbjct: 1 MRQGQTRYSYIVMQFEADHETKVDLNLQENDMKQ---FKLDKTLEGKASYIEAYSHTSTR 57
Query: 311 -----------TYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERG 359
TY V++++ +VNR I VPG F+ G SA++C+YKA +G+++PL R
Sbjct: 58 ATFVNECPLGKTYNVISRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHLFPLNRS 117
Query: 360 FIFIHKPPIHIR--------------------------FEEIATVNFARSGGST--RSFD 391
F+FI KP I IR FE+I +V F+R+G +T R F
Sbjct: 118 FLFIVKPVIFIRWVLLPTLAIKLAPVPVDWAALTNAMLFEDIVSVEFSRTGVTTQNRFFA 177
Query: 392 FEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEK 434
+ ++ + + F++I+K EY L+D++ K+++V N E+
Sbjct: 178 ILVSMRGAIEYEFTNIDKSEYKFLYDYLISKQVKVVNAEDTER 220
>gi|396081733|gb|AFN83348.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
romaleae SJ-2008]
Length = 424
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 172/375 (45%), Gaps = 45/375 (12%)
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGN-V 118
A+RIF +++ + ID++ F FKI + KEL + G G
Sbjct: 57 MAIRIF--GNAVYEINNVDQNYIDELKRMFSEYFKISLYVKELEIADVLCGELGINGQKA 114
Query: 119 LSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDP 178
L F + T FE+P+ D+ +NE+++ +E+RF +
Sbjct: 115 LEFR-STKTIFEVPVEDIESVVDIRNELSISLKD--------VEIRF-------VSNKKA 158
Query: 179 VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
+E K+ + + D I + PRG++++ F + +L G ++D+K+
Sbjct: 159 IEEIKEGCSS------SVDDEIFKMEGLSLAYPRGKFNLIFFRDYLRLVGSSYDHKVYYK 212
Query: 239 TVLRMFTLPHKDGR--QNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELK 296
+V +++ L R + + V +DPPI+QGQTRY ++ F+ +E E+ +++ LK
Sbjct: 213 SVRQLYILEKGYIRDEERYVVACVDPPIRQGQTRYDYIVASFDD---AEGEMNANDERLK 269
Query: 297 EKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPL 356
KE SG E+ ++M+ + K V F G + C+ KA G +YPL
Sbjct: 270 --------KEYSGLHSEIFTEVMETLCVIK-AVRSMFESRDGMRCLRCAIKAYEGQLYPL 320
Query: 357 ERGFIFIHKPPIHIRFEEIATVNFAR---SGGSTRSFDFEIELKSGVLHTFSSIEKEEYG 413
E +F+ K I + EI+ V F+R S ++FD + + +TF+ + K+E+G
Sbjct: 321 EDCVLFLPK-AIRLGLNEISLVEFSRINLSSMQAKTFDMTLFCEGS--YTFNGLSKDEFG 377
Query: 414 KLFDFIREKKLRVKN 428
L + K ++ ++
Sbjct: 378 MLEQYFHSKGVKARS 392
>gi|403224276|dbj|BAM42406.1| structure-specific recognition protein 1 [Theileria orientalis
strain Shintoku]
Length = 309
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 31/265 (11%)
Query: 21 GKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQK--------------LVGTWALRIFL 66
G K++ + +KNK+TG+V Q D+ + + K ++ + LRI L
Sbjct: 22 GAFKVSSELFGWKNKRTGEVIQHRSTDVSTITFVKTNSSRNSLKSGIINILDLYQLRIEL 81
Query: 67 ---KNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDV 123
KN + RF GF E + + + F ++K+ + E++ GW+WG +F +
Sbjct: 82 NESKNYKVLRFDGFTEKNVHDLNNHFTEHYKLSCEKDEVAGSGWHWGTYEFENATFRLRI 141
Query: 124 NNTTAFEIPLRDVSQCTT-GKNEVTVEFHPNDEAAES--LIEMRFYIPTNEIAGDTDP-- 178
NN++ +I + ++Q T K ++ +E N S L+E+RF +P G TDP
Sbjct: 142 NNSSGIDIDTKSIAQATIPSKTDLAIELKTNSTVFNSDDLVEIRFCVP-----GKTDPED 196
Query: 179 ----VEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYK 234
+E K + + ++ + + IA+ ++ + PRGRY+I+ +LHGK++DY
Sbjct: 197 AEIQLEDLKQTFLMKSGLDEMKSEKIALLMDVPLIVPRGRYEIEFTKRSIKLHGKSYDYT 256
Query: 235 IPISTVLRMFTLPHKDGRQNFFVIS 259
+ S V+RMF LP + F+++
Sbjct: 257 LLYSNVIRMFLLPKPNSPHVNFILA 281
>gi|238565646|ref|XP_002385897.1| hypothetical protein MPER_16072 [Moniliophthora perniciosa FA553]
gi|215436254|gb|EEB86827.1| hypothetical protein MPER_16072 [Moniliophthora perniciosa FA553]
Length = 138
Score = 110 bits (274), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 197 GDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFF 256
GD + F E+ LTPRGRYD+ +F F +L GKT+DYKI + + R+F LP KD F
Sbjct: 3 GDMVLSFEEVLVLTPRGRYDVIMFPEFLRLRGKTYDYKIEYTKISRLFLLP-KDDLHVLF 61
Query: 257 VISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMA 316
++ L PI+QGQT Y +L + F+++E + EL ++E+ KYE KL+K PT+EV++
Sbjct: 62 ILGLTHPIRQGQTPYQYLIMQFSREEETTAELNMDDEEVA-KYE-KLNKNYDDPTFEVVS 119
Query: 317 KIMKVIVNRKI 327
+ + + +KI
Sbjct: 120 SVFRALSKKKI 130
>gi|82706005|ref|XP_727203.1| structure-specific recognition protein 1 [Plasmodium yoelii yoelii
17XNL]
gi|23482931|gb|EAA18768.1| structure-specific recognition protein 1 [Plasmodium yoelii yoelii]
Length = 198
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 281 DETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTS 340
D+ ++++ SE++++ KL+K L+G Y+V+ ++ + + +PG +R
Sbjct: 2 DDDMDLDINASEEDIQNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEH 58
Query: 341 AVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSG--GSTRSFDFEIELKS 398
+TCSY+AA+G +YPL + F+F+ KP I I F++I T++F R+G R F I+ K
Sbjct: 59 GITCSYRAASGQLYPLNKYFLFVVKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKR 118
Query: 399 GVLHTFSSIEKEEYGKLFDFIREKKLRVKN 428
G+ + +++I+K EY L +F++ K L +++
Sbjct: 119 GISYEYTNIDKSEYAPLLEFLKSKNLNIQD 148
>gi|62087844|dbj|BAD92369.1| structure specific recognition protein 1 variant [Homo sapiens]
Length = 547
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 80/116 (68%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M E LEF +V E +G++ G+L+++ Q I+FKN KTGKV+ I +L W+++
Sbjct: 205 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 264
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG 116
L++ KNG ++++ GF+E+E +K+ FFKT++++++ EK+L V+GWNWG KF G
Sbjct: 265 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGG 320
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRD 135
G+ + + T F ++ +L W G +LSFD+ + FEIPL +
Sbjct: 375 GYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLTGQLLSFDIGDQPVFEIPLSN 434
Query: 136 VSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEA 181
VSQCTTGKNEVT+EFH ND+A SL+E+RFY+P + G DPVE
Sbjct: 435 VSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDG-VDPVEV 479
>gi|300706654|ref|XP_002995575.1| hypothetical protein NCER_101483 [Nosema ceranae BRL01]
gi|239604736|gb|EEQ81904.1| hypothetical protein NCER_101483 [Nosema ceranae BRL01]
Length = 417
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 167/358 (46%), Gaps = 43/358 (12%)
Query: 76 GFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIG-NVLSFDVNNTTAFEIPLR 134
G + ID I +KI++ +EL + G G + F N T FEIP++
Sbjct: 68 GIPDNFIDSIIKICNDAYKINLYMRELEITNVGRGDLTVNGKGFIEFS-NEKTIFEIPIK 126
Query: 135 DVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVIN 194
D+ +NE++V+ +E+RF + T E + KD+ +
Sbjct: 127 DIDCIADIRNELSVKLDN--------VEIRF-VTTKE------TINEIKDACNSNIE--- 168
Query: 195 ATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLP--HKDGR 252
D + F I + PRG+ + ++ +F++ G ++D+KI V +F L + +
Sbjct: 169 ---DDLVTFEAITMVYPRGKNNFMLYKDYFRIIGYSYDHKIYYKNVKDIFFLEKNYISDQ 225
Query: 253 QNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTY 312
+ +SL+ PI+QG T+Y+ + L F + E+++ ++ L+++Y G L
Sbjct: 226 DKYIALSLETPIRQGLTKYYLIVLSFGNE---EVDVDINDSRLEKRYNGLLS-------- 274
Query: 313 EVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRF 372
+V I + +V + F + C+YKA G IYPL+ IF+ + I I
Sbjct: 275 DVFIDIFEHLVEVD-AITSKFITSDKRRGLKCTYKAYEGQIYPLDGCLIFLPR-SIKINI 332
Query: 373 EEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVK 427
++I +V F+R S+ ++FD I ++ +TF+ + KE++G L + E + ++
Sbjct: 333 KDIFSVEFSRINVSSLQAKTFDMTISAETN--YTFNGLYKEDFGILEKYFNENNVTIR 388
>gi|226287339|gb|EEH42852.1| FACT complex subunit POB3 [Paracoccidioides brasiliensis Pb18]
Length = 572
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 27/229 (11%)
Query: 295 LKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGS-FRGHTGTSAVTCSYKAAAGYI 353
L+ +Y+ KL+ P ++V+ K+ + + +K+ +P F H G S V CS KA G +
Sbjct: 335 LQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLL 394
Query: 354 YPLERGFIFIHKPPIHIRFEEIATVNFARSGG---STRSFDFEIELKSGVL-HTFSSIEK 409
+ L++ F+F+ KP +++ E I+ + +R GG ++R+FD + LK G+ H FS+I +
Sbjct: 395 FCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINR 454
Query: 410 EEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD 469
EE L +F + K +R KN +DD A A + E A D+E
Sbjct: 455 EEQQPLEEFFKAKNIRFKNE-------------MADDSSALIA--AALDNEDASSDEEMA 499
Query: 470 EDEDESTDEDFNPD-------QAESDVAEEYDSNPTPTDSDEDSDASEG 511
D + ++ ++ESDVAEEYDS + S D++ +G
Sbjct: 500 AGNDRGSADEDEESVDEDFQAESESDVAEEYDSAHESSGSGSDAEVDDG 548
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 44/182 (24%)
Query: 74 FAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPL 133
FA + + D+ FK + I++ +E ++RGWNWG +F L+F+V N AFE+P
Sbjct: 150 FAPYLHHDFDRTSKAFKIWYGINIENREHALRGWNWGKAEFTKAELTFNVQNRPAFELPY 209
Query: 134 RDVSQC-TTGKNEVTVEFHPNDEAA----------------------ESLIEMRFYIPTN 170
++S GKNEV VEF +A + L+EMRFYIP
Sbjct: 210 SEISNTNLAGKNEVAVEFALPVDAVNGTNGQSEGSTKNRGRKAGAGRDELVEMRFYIPGT 269
Query: 171 EI---------------------AGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCL 209
+ A + + F +++M++A + + GD A F ++ L
Sbjct: 270 ALKKEKPEGEEGEGDEKSVQGEEAEEQNAANLFYETLMDKAEIGDVAGDTFATFLDVLHL 329
Query: 210 TP 211
TP
Sbjct: 330 TP 331
>gi|158300246|ref|XP_320213.4| AGAP012335-PA [Anopheles gambiae str. PEST]
gi|157013066|gb|EAA00360.4| AGAP012335-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 85/122 (69%), Gaps = 4/122 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P +A+M++ N RE+IKKD PG+S TE++KKGGELWK + K+K E++ K K
Sbjct: 563 DPNAPKRPSTAFMLFMNASREQIKKDFPGLSITEMSKKGGELWKEL--KDKKEWEAKAAK 620
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSS 669
AK+DY EA+ A+K SGGG D D + K AKK ++ +A+ KSKEFIE + SS
Sbjct: 621 AKDDYTEAMAAWKASGGGTDGGDKGEKRKKSTAKK--SSDSAMKGSGFKSKEFIEGDDSS 678
Query: 670 SD 671
SD
Sbjct: 679 SD 680
>gi|239792337|dbj|BAH72522.1| ACYPI006576 [Acyrthosiphon pisum]
Length = 197
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 562 MMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
M+WFN+ RE+IK DNPGISF +IAKKGGELWK +S+ +K++Y+EK K+KE+Y EA+K +
Sbjct: 1 MIWFNEAREEIKSDNPGISFVDIAKKGGELWKKMSTSDKSKYEEKAAKSKEEYIEAMKEF 60
Query: 622 KESGGGQD 629
KESGGG +
Sbjct: 61 KESGGGAE 68
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
+++KKKD NAPK+P SA+ ++ +D R KIK+DNPGIS +IAKK GELW T K+KA Y
Sbjct: 85 SRKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWSTQGPKDKAPY 144
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKK 645
+ + K KE Y + + AYK GG +D GK S +PA KK
Sbjct: 145 EARAAKLKEKYEKDVAAYKAKGGVSKNDAGKKSGPGRPAAKK 186
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD PK MS+Y + R++ KK +PG ++F+E +KK E WK +SSKEK++++E
Sbjct: 2 KDHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEEL 61
Query: 607 VNKAKEDYNEALKAY 621
K Y++ +++Y
Sbjct: 62 AKTDKIRYDQEMQSY 76
>gi|194755944|ref|XP_001960239.1| GF11622 [Drosophila ananassae]
gi|190621537|gb|EDV37061.1| GF11622 [Drosophila ananassae]
Length = 111
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K+E+++K K KED
Sbjct: 6 PKRPLSAYMLWLNENREQIKKDNPGSKVTDIAKRGGELWRGL--KDKSEWEQKAIKMKED 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|195431784|ref|XP_002063908.1| GK15924 [Drosophila willistoni]
gi|194159993|gb|EDW74894.1| GK15924 [Drosophila willistoni]
Length = 111
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N R+ IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARDSIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESGGGQDSDDGKTSKSKKP 641
Y+ A+K + E+ GG + +G K KP
Sbjct: 63 YDRAVKEF-EANGGSSAANGGAKKRSKP 89
>gi|195431780|ref|XP_002063906.1| GK15658 [Drosophila willistoni]
gi|194159991|gb|EDW74892.1| GK15658 [Drosophila willistoni]
Length = 112
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNENREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKQKEE 63
Query: 614 YNEALKAYKESGGGQDSDDGKTSKSKKPA 642
YN+A+K Y+ +GG +D G K KK A
Sbjct: 64 YNKAVKEYEANGG---TDSGAPKKRKKIA 89
>gi|289741165|gb|ADD19330.1| high mobility group protein D [Glossina morsitans morsitans]
gi|289741169|gb|ADD19332.1| nucleosome-binding factor SPN POB3 subunit [Glossina morsitans
morsitans]
Length = 111
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNENREQIKKDNPGSKVTDIAKRGGELWRAI--KDKTEWEQKAVKMKEE 63
Query: 614 YNEALKAYKESGGGQDSDDG 633
YN+A+K Y E+ GG D+ G
Sbjct: 64 YNKAVKEY-EANGGTDTGAG 82
>gi|289741167|gb|ADD19331.1| high mobility group protein D [Glossina morsitans morsitans]
Length = 111
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNENREQIKKDNPGSKVTDIAKRGGELWRAI--KDKTEWEQKAVKMKEE 63
Query: 614 YNEALKAYKESGGGQDSDDG 633
YN+A+K Y E+ GG D+ G
Sbjct: 64 YNKAVKEY-EANGGTDTGAG 82
>gi|289742511|gb|ADD20003.1| high mobility group protein D [Glossina morsitans morsitans]
Length = 110
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W + RE+IK++NPGI TEIAKKGGE+W+++ K+K+E++ K KAKED
Sbjct: 5 PKRPLSAYMLWLSSAREQIKRENPGIRVTEIAKKGGEIWRSM--KDKSEWEAKAAKAKED 62
Query: 614 YNEALKAYKESGGGQDSDDGK 634
Y +A+K ++ +GG + GK
Sbjct: 63 YEDAVKEFEANGGSTANGGGK 83
>gi|195025112|ref|XP_001986001.1| GH21124 [Drosophila grimshawi]
gi|193902001|gb|EDW00868.1| GH21124 [Drosophila grimshawi]
Length = 111
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IKK+NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKKENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESGGGQDSDDG 633
Y+ A+K ++ +GG ++ G
Sbjct: 63 YDRAVKDFEANGGSSAANGG 82
>gi|38047781|gb|AAR09793.1| similar to Drosophila melanogaster HmgZ, partial [Drosophila
yakuba]
Length = 104
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEE 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|195381989|ref|XP_002049715.1| GJ21748 [Drosophila virilis]
gi|194144512|gb|EDW60908.1| GJ21748 [Drosophila virilis]
Length = 112
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESGGGQDSDDGKTSK 637
Y+ A+K ++ +GG + +G K
Sbjct: 63 YDRAVKDFEANGGSSAAANGGAKK 86
>gi|194882008|ref|XP_001975105.1| GG22136 [Drosophila erecta]
gi|190658292|gb|EDV55505.1| GG22136 [Drosophila erecta]
Length = 111
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESGGGQDSDDG 633
Y+ A+K ++ +GG ++ G
Sbjct: 63 YDRAVKEFEANGGSSAANGG 82
>gi|195486377|ref|XP_002091483.1| HmgD [Drosophila yakuba]
gi|38047835|gb|AAR09820.1| similar to Drosophila melanogaster HmgD, partial [Drosophila
yakuba]
gi|194177584|gb|EDW91195.1| HmgD [Drosophila yakuba]
Length = 111
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESGGGQDSDDG 633
Y+ A+K ++ +GG ++ G
Sbjct: 63 YDRAVKEFEANGGSSAANGG 82
>gi|24657271|ref|NP_726106.1| HMG protein Z, isoform A [Drosophila melanogaster]
gi|24657274|ref|NP_726107.1| HMG protein Z, isoform B [Drosophila melanogaster]
gi|194882002|ref|XP_001975102.1| GG20749 [Drosophila erecta]
gi|195346531|ref|XP_002039811.1| GM15692 [Drosophila sechellia]
gi|195486382|ref|XP_002091485.1| HmgZ [Drosophila yakuba]
gi|195585528|ref|XP_002082533.1| GD25171 [Drosophila simulans]
gi|729741|sp|Q06943.1|HMGZ_DROME RecName: Full=High mobility group protein Z; Short=HMG-Z
gi|296945|emb|CAA50469.1| Hmg-Z protein [Drosophila melanogaster]
gi|7291329|gb|AAF46758.1| HMG protein Z, isoform A [Drosophila melanogaster]
gi|21064429|gb|AAM29444.1| RE28596p [Drosophila melanogaster]
gi|21645314|gb|AAM70934.1| HMG protein Z, isoform B [Drosophila melanogaster]
gi|190658289|gb|EDV55502.1| GG20749 [Drosophila erecta]
gi|194135160|gb|EDW56676.1| GM15692 [Drosophila sechellia]
gi|194177586|gb|EDW91197.1| HmgZ [Drosophila yakuba]
gi|194194542|gb|EDX08118.1| GD25171 [Drosophila simulans]
gi|220948296|gb|ACL86691.1| HmgZ-PA [synthetic construct]
Length = 111
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKKDNPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEE 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|392602278|gb|AFM80462.1| structure specific recognition protein 1, partial [Indonotothenia
cyanobrancha]
gi|392602282|gb|AFM80464.1| structure specific recognition protein 1, partial [Trematomus
vicarius]
gi|392602292|gb|AFM80469.1| structure specific recognition protein 1, partial [Lepidonotothen
nudifrons]
gi|392602294|gb|AFM80470.1| structure specific recognition protein 1, partial [Lepidonotothen
squamifrons]
gi|392602296|gb|AFM80471.1| structure specific recognition protein 1, partial [Patagonotothen
squamiceps]
gi|392602298|gb|AFM80472.1| structure specific recognition protein 1, partial [Patagonotothen
wiltoni]
gi|392602300|gb|AFM80473.1| structure specific recognition protein 1, partial [Patagonotothen
guntheri]
gi|392602302|gb|AFM80474.1| structure specific recognition protein 1, partial [Patagonotothen
ramsayi]
gi|392602304|gb|AFM80475.1| structure specific recognition protein 1, partial [Patagonotothen
tessellata]
gi|392602312|gb|AFM80479.1| structure specific recognition protein 1, partial [Trematomus
lepidorhinus]
gi|392602316|gb|AFM80481.1| structure specific recognition protein 1, partial [Trematomus
eulepidotus]
gi|392602320|gb|AFM80483.1| structure specific recognition protein 1, partial [Trematomus
loennbergii]
gi|392602332|gb|AFM80489.1| structure specific recognition protein 1, partial [Pagothenia
borchgrevinki]
gi|392602334|gb|AFM80490.1| structure specific recognition protein 1, partial [Trematomus
pennellii]
gi|392602342|gb|AFM80494.1| structure specific recognition protein 1, partial [Lepidonotothen
mizops]
gi|392602346|gb|AFM80496.1| structure specific recognition protein 1, partial [Trematomus
nicolai]
gi|392602356|gb|AFM80501.1| structure specific recognition protein 1, partial [Trematomus
tokarevi]
gi|392602372|gb|AFM80509.1| structure specific recognition protein 1, partial [Trematomus
hansoni]
gi|392602374|gb|AFM80510.1| structure specific recognition protein 1, partial [Trematomus
bernacchii]
Length = 67
Score = 92.4 bits (228), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 57/67 (85%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLTKNMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|392602276|gb|AFM80461.1| structure specific recognition protein 1, partial [Paranotothenia
magellanica]
gi|392602284|gb|AFM80465.1| structure specific recognition protein 1, partial [Notothenia
rossii]
gi|392602286|gb|AFM80466.1| structure specific recognition protein 1, partial [Dissostichus
eleginoides]
gi|392602290|gb|AFM80468.1| structure specific recognition protein 1, partial [Eleginops
maclovinus]
gi|392602306|gb|AFM80476.1| structure specific recognition protein 1, partial [Champsocephalus
gunnari]
gi|392602308|gb|AFM80477.1| structure specific recognition protein 1, partial [Chaenocephalus
aceratus]
gi|392602310|gb|AFM80478.1| structure specific recognition protein 1, partial [Parachaenichthys
georgianus]
gi|392602314|gb|AFM80480.1| structure specific recognition protein 1, partial [Notothenia
neglecta]
gi|392602324|gb|AFM80485.1| structure specific recognition protein 1, partial [Neopagetopsis
ionah]
gi|392602328|gb|AFM80487.1| structure specific recognition protein 1, partial [Chionodraco
hamatus]
gi|392602330|gb|AFM80488.1| structure specific recognition protein 1, partial [Dissostichus
mawsoni]
gi|392602338|gb|AFM80492.1| structure specific recognition protein 1, partial [Cygnodraco
mawsoni]
gi|392602340|gb|AFM80493.1| structure specific recognition protein 1, partial [Notothenia
coriiceps]
gi|392602344|gb|AFM80495.1| structure specific recognition protein 1, partial [Notothenia
angustata]
gi|392602348|gb|AFM80497.1| structure specific recognition protein 1, partial [Artedidraco
lonnbergi]
gi|392602350|gb|AFM80498.1| structure specific recognition protein 1, partial [Dacodraco
hunteri]
gi|392602352|gb|AFM80499.1| structure specific recognition protein 1, partial [Gerlachea
australis]
gi|392602358|gb|AFM80502.1| structure specific recognition protein 1, partial [Dolloidraco
longedorsalis]
gi|392602362|gb|AFM80504.1| structure specific recognition protein 1, partial [Pogonophryne
scotti]
gi|392602366|gb|AFM80506.1| structure specific recognition protein 1, partial [Chionobathyscus
dewitti]
gi|392602368|gb|AFM80507.1| structure specific recognition protein 1, partial [Histiodraco
velifer]
Length = 67
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 57/67 (85%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLSKNMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|167521093|ref|XP_001744885.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776499|gb|EDQ90118.1| predicted protein [Monosiga brevicollis MX1]
Length = 175
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 5/174 (2%)
Query: 88 FFKTNFKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVT 147
F T + I + + SV+GW G T+F F +++ AFE+PL ++ ++E
Sbjct: 4 FMSTYYNIPIQSHKTSVKGWTSGRTEFSAKHFRFVLDDGVAFEVPLASLTAAQQQRHEAI 63
Query: 148 VEFHPND--EAAESLIE-MRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFN 204
+EF +D E + ++E MRF++P A +F + + +V +G AI +
Sbjct: 64 LEFQIDDMAEVNDQVVESMRFFVPGAA-ASSGSGANSFVSEINERTAVNRISGKAICMIE 122
Query: 205 EIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVI 258
++ + PRG +D++ ++SF +LHGK FD+KI V RM L +D + FFV+
Sbjct: 123 NVKLVVPRGTHDVEFYSSFLRLHGKKFDHKIQYENVQRMHLLT-QDDKFVFFVL 175
>gi|392602360|gb|AFM80503.1| structure specific recognition protein 1, partial [Racovitzia
glacialis]
gi|392602364|gb|AFM80505.1| structure specific recognition protein 1, partial [Vomeridens
infuscipinnis]
gi|392602370|gb|AFM80508.1| structure specific recognition protein 1, partial [Prionodraco
evansii]
Length = 67
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 56/67 (83%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA +G
Sbjct: 1 EDVERRFEGKLSKNMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKATSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|392602280|gb|AFM80463.1| structure specific recognition protein 1, partial [Gobionotothen
acuta]
Length = 67
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 57/67 (85%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLTKTMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|392602322|gb|AFM80484.1| structure specific recognition protein 1, partial [Gymnodraco
acuticeps]
gi|392602336|gb|AFM80491.1| structure specific recognition protein 1, partial [Harpagifer
kerguelensis]
Length = 67
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 57/67 (85%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLSKTMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|392602326|gb|AFM80486.1| structure specific recognition protein 1, partial [Pleuragramma
antarctica]
Length = 67
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 56/67 (83%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA +G
Sbjct: 1 EDVERRFEGKLTKTMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKATSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|195123269|ref|XP_002006130.1| GI20867 [Drosophila mojavensis]
gi|193911198|gb|EDW10065.1| GI20867 [Drosophila mojavensis]
Length = 111
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKK+NPG T+IAK+GGELW+ + K+K E+++K K KED
Sbjct: 6 PKRPLSAYMLWLNENREQIKKENPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKED 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|195381983|ref|XP_002049712.1| GJ20604 [Drosophila virilis]
gi|194144509|gb|EDW60905.1| GJ20604 [Drosophila virilis]
Length = 111
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE+IKK+NPG T+IAK+GGELW+ + K+K E+++K K KED
Sbjct: 6 PKRPLSAYMLWLNENREQIKKENPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKED 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|312385331|gb|EFR29858.1| hypothetical protein AND_00899 [Anopheles darlingi]
Length = 174
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 10/99 (10%)
Query: 531 RKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
R+S+ GS+K PK+P+SAYM+W N RE+IKK+NPGI TEIAKKGGE
Sbjct: 52 RRSRHSPNPMPGSSK--------PKRPLSAYMLWLNSAREQIKKENPGIKVTEIAKKGGE 103
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQD 629
LW+ + K+K+E++ K K K++YN+ ++ ++ +GG +D
Sbjct: 104 LWRGM--KDKSEWEFKAAKMKDEYNKQMQDFERNGGSKD 140
>gi|195154374|ref|XP_002018097.1| GL17523 [Drosophila persimilis]
gi|390179748|ref|XP_001361671.2| GA14726 [Drosophila pseudoobscura pseudoobscura]
gi|194113893|gb|EDW35936.1| GL17523 [Drosophila persimilis]
gi|388859956|gb|EAL26250.2| GA14726 [Drosophila pseudoobscura pseudoobscura]
Length = 113
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE IKK+NPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 8 PKRPLSAYMLWLNETRESIKKENPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEE 65
Query: 614 YNEALKAYKESGGGQDS 630
YN A+K Y E+ GG DS
Sbjct: 66 YNRAVKEY-EANGGTDS 81
>gi|170033409|ref|XP_001844570.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874308|gb|EDS37691.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 113
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IKK+NPGI TEIAKKGGELW+ + K+K E++ K K K++
Sbjct: 5 PKRPLSAYMLWLNSAREGIKKENPGIKVTEIAKKGGELWRGM--KDKTEWENKAAKMKDE 62
Query: 614 YNEALKAYKESGGGQD 629
YN+A++ ++ +GG +D
Sbjct: 63 YNKAVQEFERNGGSKD 78
>gi|392602354|gb|AFM80500.1| structure specific recognition protein 1, partial [Acanthodraco
dewitti]
Length = 67
Score = 89.7 bits (221), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 56/66 (84%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLSKTMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPLER 358
+YPLER
Sbjct: 61 LYPLER 66
>gi|118792222|ref|XP_001238271.1| AGAP012334-PA [Anopheles gambiae str. PEST]
gi|116116797|gb|EAU75768.1| AGAP012334-PA [Anopheles gambiae str. PEST]
Length = 111
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE+IKK+NPGI TEIAKKGGELW+ + K+K+E++ K K K++
Sbjct: 5 PKRPLSAYMLWLNSAREQIKKENPGIKVTEIAKKGGELWRGM--KDKSEWEYKAAKMKDE 62
Query: 614 YNEALKAYKESGGGQDS 630
YN+ ++ ++ +GG +D+
Sbjct: 63 YNKQMQDFERNGGSKDA 79
>gi|195025098|ref|XP_001985998.1| GH20784 [Drosophila grimshawi]
gi|193901998|gb|EDW00865.1| GH20784 [Drosophila grimshawi]
Length = 111
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N+ RE IKK+NPG T+IAK+GGELW+ + K+K E+++K K KE+
Sbjct: 6 PKRPLSAYMLWLNENRESIKKENPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEE 63
Query: 614 YNEALKAYKESGGGQDS 630
YN+A+K Y E+ GG DS
Sbjct: 64 YNKAVKEY-EANGGTDS 79
>gi|159162245|pdb|1E7J|A Chain A, Hmg-D Complexed To A Bulge Dna
Length = 74
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAYKESG 625
Y+ A+K ++ +G
Sbjct: 63 YDRAVKEFEANG 74
>gi|6730529|pdb|1QRV|A Chain A, Crystal Structure Of The Complex Of Hmg-D And Dna
gi|6730530|pdb|1QRV|B Chain B, Crystal Structure Of The Complex Of Hmg-D And Dna
Length = 73
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 4 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 61
Query: 614 YNEALKAYKESG 625
Y+ A+K ++ +G
Sbjct: 62 YDRAVKEFEANG 73
>gi|159162413|pdb|1HMA|A Chain A, The Solution Structure And Dynamics Of The Dna Binding
Domain Of Hmg-D From Drosophila Melanogaster
Length = 73
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 4 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 61
Query: 614 YNEALKAYKESG 625
Y+ A+K ++ +G
Sbjct: 62 YDRAVKEFEANG 73
>gi|392602318|gb|AFM80482.1| structure specific recognition protein 1, partial [Trematomus
scotti]
Length = 67
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 56/67 (83%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+G +G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLTKNMSGSLYEMVSRVMKSLVNRKITVPGNFQGPSGAQCITCSYKASSGL 60
Query: 353 IYPLERG 359
+YPLERG
Sbjct: 61 LYPLERG 67
>gi|269862999|ref|XP_002651057.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220065197|gb|EED42999.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 405
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 155/363 (42%), Gaps = 62/363 (17%)
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVL 119
+ LRI + G + E+++ I F I++ EL G F N+L
Sbjct: 54 YCLRIITETGC-YDILNVDESQLIPIKQRASEYFGINLINTELETLNTTEGNLVFSNNIL 112
Query: 120 SFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPV 179
+ + F IP KN A E ++E+ NE V
Sbjct: 113 TLH-SEKPVFSIP----------KN-----------AIEHIVEL-----GNEFQFHLKDV 145
Query: 180 EAFKDSVMNQASVI-NATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
E + N + + N D + + + C++PR R + F + F+ G ++D+ I
Sbjct: 146 EIVLSTTSNAINFLKNKVNDEVCIVTNVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYK 205
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
V + L + + ++ L+ PI QGQTRY ++F+ D+ E+E+ + L+E
Sbjct: 206 DVTNVLFL--ETDTDTYLLLRLETPIVQGQTRYE--GMVFSLDK-KEIEVSARDGRLQEY 260
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA---VTCSYKAAAGYIYP 355
Y G D EV+ +I++ ++ G T A + C+ K GY++
Sbjct: 261 YHGGQD--------EVVVEIIEKLI-----------GSTAREAKFYIKCTNKVNDGYLFF 301
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEY 412
++ G F+ KP + EEI V F+R GGS +SFD + + ++ F+SI K ++
Sbjct: 302 MDTGLQFLPKPTF-LSIEEIKAVEFSRIGGSVLQGKSFDMTVHGEK--IYNFNSINKTDF 358
Query: 413 GKL 415
K+
Sbjct: 359 TKV 361
>gi|357608070|gb|EHJ65807.1| mobility group protein 1B [Danaus plexippus]
Length = 180
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 543 STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAE 602
+ ++K K + PK+PMSAYM+W N RE+IK +NPG+ TEIAKKGGE+W+ S K+K
Sbjct: 54 AIRKKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLKVTEIAKKGGEIWR--SMKDKTV 111
Query: 603 YDEKVNKAKEDYNEALKAY 621
++EK KAKE Y + L++Y
Sbjct: 112 WEEKAAKAKEQYTKDLESY 130
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ +D R KIK+DNPGIS +IAKK GELW T S+K+KA Y+ K K
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAK 173
Query: 610 AKEDYNEALKAYKESGGGQDSDDGK 634
KE Y + + AY+ GG SD+ K
Sbjct: 174 LKEKYEKDVAAYRAKGGSGKSDELK 198
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ SAY + RE+ KK +PG ++F E +KK E WKT+SSKEK ++DE
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 607 VNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 86 AKTDKARYDREMKTY 100
>gi|151301198|ref|NP_001093087.1| mobility group protein 1B [Bombyx mori]
gi|95102634|gb|ABF51255.1| mobility group protein 1B [Bombyx mori]
Length = 119
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+PMSAYM+W N RE+IK +NPG+ TEIAKKGGE+WK++ K+K E+++K KAKE
Sbjct: 5 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEWEQKAAKAKEQ 62
Query: 614 YNEALKAY 621
Y + L++Y
Sbjct: 63 YAKDLESY 70
>gi|269863478|ref|XP_002651237.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220064898|gb|EED42819.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 349
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 61/330 (18%)
Query: 93 FKIDVPEKELSVRGWNWGGTKFIGNVLSFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHP 152
F I++ EL G F N+L+ + F IP KN
Sbjct: 30 FGINLINTELETLNTTEGNLVFSNNILTLH-SEKPVFSIP----------KN-------- 70
Query: 153 NDEAAESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVI-NATGDAIAVFNEIQCLTP 211
A E ++E+ NE VE + N + + N D + + + C++P
Sbjct: 71 ---AIEHIVELG-----NEFQFHLKDVEIVLSTTSNAINFLKNKVNDEVCIVTNVNCVSP 122
Query: 212 RGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRY 271
R R + F + F+ G ++D+ I V + L + + ++ L+ PI QGQTRY
Sbjct: 123 RSRVTLIFFETHFECRGSSYDHSIAYKDVTNVLFL--ETDTDTYLLLRLETPIVQGQTRY 180
Query: 272 HFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPG 331
++F+ D+ E+E+ + L+E Y G D EV+ +I++ ++
Sbjct: 181 E--GMVFSLDK-KEIEVSARDGRLQEYYHGGQD--------EVVVEIIEKLI-------- 221
Query: 332 SFRGHTGTSA---VTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST- 387
G T A + C+ K GY++ ++ G F+ KP + EEI V F+R GGS
Sbjct: 222 ---GSTAREAKFYIKCTNKVNDGYLFFMDTGLQFLPKPTF-LSIEEIKAVEFSRIGGSVL 277
Query: 388 --RSFDFEIELKSGVLHTFSSIEKEEYGKL 415
+SFD + + ++ F+SI K ++ K+
Sbjct: 278 QGKSFDMTVHGEK--IYNFNSINKTDFTKV 305
>gi|269866208|ref|XP_002652193.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220062983|gb|EED41863.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 270
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 33/228 (14%)
Query: 194 NATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQ 253
N D + + + C++PR R + F + F+ G ++D+ I V + L +
Sbjct: 26 NKVNDEVCIVTNVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYKDVTNVLFL--ETDTD 83
Query: 254 NFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYE 313
+ ++ L+ PI QGQTRY ++F+ D+ E+E+ + L+E Y G D E
Sbjct: 84 TYLLLRLETPIVQGQTRYE--GMVFSLDK-KEIEVSARDGRLQEYYHGGQD--------E 132
Query: 314 VMAKIMKVIVNRKITVPGSFRGHTGTSA---VTCSYKAAAGYIYPLERGFIFIHKPPIHI 370
V+ +I++ ++ G T A + C+ K GY++ ++ G F+ KP +
Sbjct: 133 VVVEIIEKLI-----------GSTAREAKFYIKCTNKVNDGYLFFMDTGLQFLPKPTF-L 180
Query: 371 RFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEYGKL 415
EEI V F+R GGS +SFD + + ++ F+SI K ++ K+
Sbjct: 181 SIEEIKAVEFSRIGGSVLQGKSFDMTVHGEK--IYNFNSINKTDFTKV 226
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK++ PGIS + AKK GELW T SSKEKA Y+ K K
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGISIGDTAKKLGELWSTQSSKEKAPYEAKAAK 146
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKK 645
KE Y + + AY+ G SD GK S +PA KK
Sbjct: 147 LKEKYEKEVAAYRAKGVSGKSDGGKKSGPGRPAAKK 182
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
N P+ S+Y + D RE+ K+ +PG + F E +KK E WKT+S+KEKA+++E
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 610 AKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 61 DKIRYDREMKTY 72
>gi|392602288|gb|AFM80467.1| structure specific recognition protein 1, partial [Gobionotothen
gibberifrons]
Length = 66
Score = 86.7 bits (213), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 54/64 (84%)
Query: 293 QELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKAAAGY 352
++++ ++EGKL K +SG YE+++++MK +VNRKITVPG+F+GH+G +TCSYKA++G
Sbjct: 1 EDVERRFEGKLTKTMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGL 60
Query: 353 IYPL 356
+YPL
Sbjct: 61 LYPL 64
>gi|326520880|dbj|BAJ92803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 28/293 (9%)
Query: 356 LERGFIFIHKPPIHIRFEEIATVNF-ARSGGSTRS---FDFEIELKSGVLHTFSSIEKEE 411
L++ F F P ++ +N A +GG++ S FD ++LK+ H F +I++ E
Sbjct: 14 LKKAFSFCQSPRHSFCMRRLSMLNLSAMAGGASMSSHYFDLLVKLKNDQEHLFRNIQRNE 73
Query: 412 YGKLFDFIREKKLRVKNTGK--GEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDEDD 469
Y LF+F+ K L++ N G+ ++ S D+ D +L R+K +A +
Sbjct: 74 YHNLFNFVSGKNLKILNLGEDGQDRTGAVAAALQSTDDDPVDPHLERIKNQAGDE----- 128
Query: 470 EDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDAS--EGTKKKKKEKSRKTIT-- 525
E + DEDF VA++ DS DS+E SDAS +G K+K +K +
Sbjct: 129 --ESDEEDEDF--------VADKDDSGSPSDDSEEGSDASISDGEKEKSSKKEASSSKPP 178
Query: 526 ISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIA 585
+ KP+ + K+K KD NAPK+ ++ +M + R +K NP +S T+IA
Sbjct: 179 VKRKPKSVDVESSEKRKPKKKKTKDPNAPKRAIAPFMYFSKAERANLKNINPELSTTDIA 238
Query: 586 KKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQ---DSDDGKT 635
KK GE W+ +S++EK Y E+ K+ Y E AY+ +G DS DG +
Sbjct: 239 KKLGEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAAPVDVDSADGSS 291
>gi|24657284|ref|NP_726109.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|24657287|ref|NP_726110.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|281363985|ref|NP_001163244.1| high mobility group protein D, isoform C [Drosophila melanogaster]
gi|195346535|ref|XP_002039813.1| GM15859 [Drosophila sechellia]
gi|195585534|ref|XP_002082536.1| GD11622 [Drosophila simulans]
gi|729733|sp|Q05783.1|HMGD_DROME RecName: Full=High mobility group protein D; Short=HMG-D
gi|157626|gb|AAA28609.1| high mobility group protein [Drosophila melanogaster]
gi|296943|emb|CAA50468.1| Hmg-D protein [Drosophila melanogaster]
gi|7291330|gb|AAF46759.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|21392016|gb|AAM48362.1| LD24628p [Drosophila melanogaster]
gi|21645449|gb|AAM71011.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|116805826|emb|CAL26283.1| CG17950 [Drosophila melanogaster]
gi|116805828|emb|CAL26284.1| CG17950 [Drosophila melanogaster]
gi|116805830|emb|CAL26285.1| CG17950 [Drosophila melanogaster]
gi|116805832|emb|CAL26286.1| CG17950 [Drosophila melanogaster]
gi|116805834|emb|CAL26287.1| CG17950 [Drosophila melanogaster]
gi|116805836|emb|CAL26288.1| CG17950 [Drosophila melanogaster]
gi|116805838|emb|CAL26289.1| CG17950 [Drosophila melanogaster]
gi|116805840|emb|CAL26290.1| CG17950 [Drosophila melanogaster]
gi|116805842|emb|CAL26291.1| CG17950 [Drosophila melanogaster]
gi|116805844|emb|CAL26292.1| CG17950 [Drosophila melanogaster]
gi|116805846|emb|CAL26293.1| CG17950 [Drosophila melanogaster]
gi|116805848|emb|CAL26294.1| CG17950 [Drosophila simulans]
gi|194135162|gb|EDW56678.1| GM15859 [Drosophila sechellia]
gi|194194545|gb|EDX08121.1| GD11622 [Drosophila simulans]
gi|220943924|gb|ACL84505.1| HmgD-PA [synthetic construct]
gi|220953800|gb|ACL89443.1| HmgD-PA [synthetic construct]
gi|223967235|emb|CAR93348.1| CG17950-PA [Drosophila melanogaster]
gi|223967237|emb|CAR93349.1| CG17950-PA [Drosophila melanogaster]
gi|223967239|emb|CAR93350.1| CG17950-PA [Drosophila melanogaster]
gi|223967241|emb|CAR93351.1| CG17950-PA [Drosophila melanogaster]
gi|223967243|emb|CAR93352.1| CG17950-PA [Drosophila melanogaster]
gi|223967245|emb|CAR93353.1| CG17950-PA [Drosophila melanogaster]
gi|223967247|emb|CAR93354.1| CG17950-PA [Drosophila melanogaster]
gi|223967249|emb|CAR93355.1| CG17950-PA [Drosophila melanogaster]
gi|223967251|emb|CAR93356.1| CG17950-PA [Drosophila melanogaster]
gi|223967253|emb|CAR93357.1| CG17950-PA [Drosophila melanogaster]
gi|223967255|emb|CAR93358.1| CG17950-PA [Drosophila melanogaster]
gi|223967257|emb|CAR93359.1| CG17950-PA [Drosophila melanogaster]
gi|272432624|gb|ACZ94516.1| high mobility group protein D, isoform C [Drosophila melanogaster]
Length = 112
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAY 621
Y+ A+K +
Sbjct: 63 YDRAVKEF 70
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ +D R +IK++NPGIS +IAKK GE W T +SK+K Y+ + K
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGISIGDIAKKLGEFWSTQTSKDKVPYEARAGK 151
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKET 647
KE Y + + AYK G SD GK S +P KK T
Sbjct: 152 LKEKYEKDVAAYKAKSGLGKSDAGKKSGPGRPPAKKAT 189
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPGIS--FTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ S+Y + RE+ KK +PG+S F E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|307568341|pdb|3NM9|A Chain A, Hmgd(M13a)-Dna Complex
gi|307568342|pdb|3NM9|D Chain D, Hmgd(M13a)-Dna Complex
gi|307568343|pdb|3NM9|G Chain G, Hmgd(M13a)-Dna Complex
gi|307568344|pdb|3NM9|J Chain J, Hmgd(M13a)-Dna Complex
gi|307568345|pdb|3NM9|M Chain M, Hmgd(M13a)-Dna Complex
gi|307568346|pdb|3NM9|P Chain P, Hmgd(M13a)-Dna Complex
Length = 73
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAY +W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 4 PKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 61
Query: 614 YNEALKAYKESG 625
Y+ A+K ++ +G
Sbjct: 62 YDRAVKEFEANG 73
>gi|157129265|ref|XP_001655340.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129267|ref|XP_001655341.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129269|ref|XP_001655342.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129271|ref|XP_001655343.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|94468770|gb|ABF18234.1| nucleosome-binding factor SPN POB3 subunit [Aedes aegypti]
gi|108872275|gb|EAT36500.1| AAEL011414-PC [Aedes aegypti]
gi|108872276|gb|EAT36501.1| AAEL011414-PD [Aedes aegypti]
gi|108872277|gb|EAT36502.1| AAEL011414-PA [Aedes aegypti]
gi|108872278|gb|EAT36503.1| AAEL011414-PB [Aedes aegypti]
Length = 112
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE+IKK+NPGI TEIAK+GGELW+ + K+K+E++ K K K++
Sbjct: 5 PKRPLSAYMLWLNSAREQIKKENPGIKVTEIAKRGGELWRAM--KDKSEWENKAAKMKDE 62
Query: 614 YNEALKAY 621
YN+A++ +
Sbjct: 63 YNKAVQEF 70
>gi|195123263|ref|XP_002006127.1| GI18728 [Drosophila mojavensis]
gi|193911195|gb|EDW10062.1| GI18728 [Drosophila mojavensis]
Length = 112
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NPGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSAREGIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALK 619
Y+ A+K
Sbjct: 63 YDRAVK 68
>gi|194755948|ref|XP_001960241.1| GF13265 [Drosophila ananassae]
gi|190621539|gb|EDV37063.1| GF13265 [Drosophila ananassae]
Length = 111
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N R+ IK++NPGI TE+AKKGGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSARDSIKRENPGIKVTEVAKKGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALKAY 621
Y+ A+K +
Sbjct: 63 YDRAVKEF 70
>gi|729729|sp|P40622.1|HMG1A_CHITE RecName: Full=Mobility group protein 1A
gi|156587|gb|AAA21712.1| high mobility group protein 1a [Chironomus tentans]
Length = 114
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IKK+NP TEIAKKGGELW+ + K+K+E++ K K KE+
Sbjct: 5 PKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGM--KDKSEWEAKAAKMKEE 62
Query: 614 YNEALKAYKESGGGQDSDDGKTSKSK 639
Y +A+K ++ +GG D G ++K +
Sbjct: 63 YEKAMKEFERNGG--DKSSGASTKKR 86
>gi|324514003|gb|ADY45729.1| FACT complex subunit Ssrp1, partial [Ascaris suum]
Length = 492
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 45/255 (17%)
Query: 195 ATGDAIAVF---NEIQCLTPRGRYDIKIFNSFFQLHGKTFD----YKIPISTVLRMFTLP 247
A GDA+ + I ++P G++ + I L K+ D Y IPI ++ R+F LP
Sbjct: 94 AEGDALVTLLAADGIIGISPEGKFHVIINKEDIIL--KSDDGGQQYTIPIDSIGRIFVLP 151
Query: 248 HKDGRQNFFV-ISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKE 306
++ +FFV ++L P+ ++ L ELP ++ K+E K++K
Sbjct: 152 QEN---HFFVALALIAPLMTADWPTGYVVL----------ELPLGKE--VSKFEEKIEKS 196
Query: 307 ----------LSGPTYEVMAKIMKVIVN-------RKITVPGSFRGHTGTSAVTCSYKAA 349
+SGP E + + M +++ K + S + +V C+Y
Sbjct: 197 EQVGDGASGPVSGPINEQLTEAMPRLLSSLSGLDAEKSVLESS---PSMLLSVVCTYDGK 253
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEK 409
+G ++PLE GF F+HK P HI F ++ +F S GS + D + +K + F +IEK
Sbjct: 254 SGCLFPLEDGFFFLHKYPTHIAFSDVFKADFIDSKGSDKQSDLVLTMKDSTMVKFCNIEK 313
Query: 410 EEYGKLFDFIREKKL 424
++ +L F E+++
Sbjct: 314 NDFYRLDVFGIEQRI 328
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 541 GGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
G ++KKD NAPK+P SA+ ++ +D R +IK ++PGIS +IAKK GELW + K+K
Sbjct: 83 GTKVGKRKKDPNAPKRPPSAFFVFCSDHRARIKGEHPGISIGDIAKKLGELWSKQTPKDK 142
Query: 601 AEYDEKVNKAKEDYNEALKAY--KESGGGQDSDDGKTSKSKKPAKKKE 646
Y+ K K KE Y + + AY K GG SD GK S +P KK E
Sbjct: 143 VPYEAKAGKLKEKYEKDVAAYRAKSGAGGGKSDAGKKSGPGRPTKKVE 190
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ S+Y + RE+ KK +PG ++F+E +KK E WKT+S+KEK ++++
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 607 VNKAKEDYNEALKAY 621
K ++ +K Y
Sbjct: 64 AKGDKVRFDREMKGY 78
>gi|157128637|ref|XP_001655167.1| hypothetical protein AaeL_AAEL002381 [Aedes aegypti]
gi|108882231|gb|EAT46456.1| AAEL002381-PA [Aedes aegypti]
Length = 67
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%), Gaps = 2/65 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE+IKK+NPGI TEIAK+GGELW+ + K+K+E++ K K K++
Sbjct: 5 PKRPLSAYMLWLNSAREQIKKENPGIKVTEIAKRGGELWRAM--KDKSEWENKAAKMKDE 62
Query: 614 YNEAL 618
YN+A+
Sbjct: 63 YNKAV 67
>gi|269862458|ref|XP_002650846.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220065528|gb|EED43211.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 379
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 155/363 (42%), Gaps = 62/363 (17%)
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVL 119
+ LRI + G + E+++ I F I++ EL G F N+L
Sbjct: 54 YCLRIITETGC-YDILNVDESQLIPIKQRASEYFGINLINTELETLNTTEGNLVFSNNIL 112
Query: 120 SFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPV 179
+ + F IP KN A E ++E+ NE V
Sbjct: 113 TLH-SEKPVFSIP----------KN-----------AIEHIVEL-----GNEFQFHLKDV 145
Query: 180 EAFKDSVMNQASVI-NATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
E + N + + N D + + + C++PR R + F + F+ G ++D+ I
Sbjct: 146 EIVLSTTSNAINFLKNKVNDEVCIVTNVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYK 205
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
V + L + + ++ L+ PI QGQTRY ++F+ D+ E+E+ + L+E
Sbjct: 206 DVTNVLFL--ETDTDTYLLLRLETPIVQGQTRYE--GMVFSLDK-KEIEVSARDGRLQEY 260
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA---VTCSYKAAAGYIYP 355
Y G D EV+ +I++ ++ G T A + C+ K GY++
Sbjct: 261 YHGGQD--------EVVVEIIEKLI-----------GSTAREAKFYIKCTNKVNDGYLFF 301
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIELKSGVLHTFSSIEKEEY 412
++ G F+ KP + EEI V F+R GGS +SFD + + ++ F+SI K ++
Sbjct: 302 MDTGLQFLPKPTF-LSIEEIKAVEFSRIGGSVLQGKSFDMTVHGEK--IYNFNSINKTDF 358
Query: 413 GKL 415
K+
Sbjct: 359 TKV 361
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ +D R +IK +NPGIS +IAKK GELW + K+K Y+ K K
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGISIGDIAKKLGELWSKQTPKDKQPYEAKAGK 151
Query: 610 AKEDYNEALKAYK-ESGGGQDSDDGKTSKSKKPAKKKE 646
KE Y + + AY+ +SG G SD GK S +P KK E
Sbjct: 152 LKEKYEKDVAAYRAKSGAGGKSDAGKKSGPGRPTKKVE 189
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ S+Y + RE+ KK +PG ++F+E +KK E WKT+S+KEK ++++
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 607 VNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 64 AKGDKVRYDREMKGY 78
>gi|195154370|ref|XP_002018095.1| GL16947 [Drosophila persimilis]
gi|194113891|gb|EDW35934.1| GL16947 [Drosophila persimilis]
Length = 111
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK+++PGI TE+AK+GGELW+ + K+K+E++ K KAK+D
Sbjct: 5 PKRPLSAYMLWLNSAREGIKRESPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDD 62
Query: 614 YNEALK 619
Y+ A+K
Sbjct: 63 YDRAVK 68
>gi|389608535|dbj|BAM17877.1| high mobility group protein D [Papilio xuthus]
Length = 121
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+PMSAYM+W N RE+IK DNPG+ TEIAKKGGE+W+++ ++K+ ++ K KAKE
Sbjct: 5 PKRPMSAYMLWLNSAREQIKADNPGLRVTEIAKKGGEIWRSM--EDKSVWEAKAAKAKEQ 62
Query: 614 YNEALKAY 621
Y + L++Y
Sbjct: 63 YTKDLESY 70
>gi|389611269|dbj|BAM19246.1| high mobility group protein D [Papilio polytes]
Length = 120
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+PMSAYM+W N RE+IK DNPG+ TEIAKKGGE+W+++ ++K+ ++ K KAKE
Sbjct: 5 PKRPMSAYMLWLNSAREQIKADNPGLKVTEIAKKGGEIWRSM--EDKSVWEAKAAKAKEQ 62
Query: 614 YNEALKAY 621
Y + L++Y
Sbjct: 63 YTKDLESY 70
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
RK KD NAPKK ++ +M + N REK+K +NPGI+F EI K GE WK + + EKA Y++
Sbjct: 547 RKPKDPNAPKKNLTGFMYFSNANREKVKAENPGIAFGEIGKMLGERWKGMGADEKAPYEQ 606
Query: 606 KVNKAKEDYNEALKAYKE 623
K K Y EA+KAYKE
Sbjct: 607 MAAKDKVRYAEAMKAYKE 624
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 63/99 (63%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G T RKKKD NAPK+P SA+ ++ ++ R +K ++P ++ EIAKK GELW SSK++A
Sbjct: 85 GKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRA 144
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
+++K K +E Y + + AY+ GG G+ + S K
Sbjct: 145 PFEQKAGKLREKYEKEVAAYRAGGGASKRGPGRPTGSVK 183
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N PK SAY + R++ K+ +P ++F+E +KK E WK++++ +K ++++
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
K Y+ +K Y G GKT + KK
Sbjct: 63 MAKADKVRYDREMKTYVPPKG-----VGKTGRKKK 92
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%)
Query: 541 GGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
GG +RKKKD NAPK+P SA+ ++ D R +IK DNPG+ IAK+ GE+W +++ K
Sbjct: 86 GGPAQRKKKDPNAPKRPPSAFFIFCADFRPQIKADNPGMVIGTIAKRLGEMWGRQTNENK 145
Query: 601 AEYDEKVNKAKEDYNEALKAYKESG 625
A Y+ K N KE Y + + AY+ SG
Sbjct: 146 APYEHKANILKEKYKKDVAAYQRSG 170
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEKV 607
D + P+ MS+Y + RE+ KK +P ++FT+ ++K E WK +S KEK +++
Sbjct: 5 DPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLA 64
Query: 608 NKAKEDYNEALKAYKESGGGQ 628
K Y+ +K Y + GG+
Sbjct: 65 RADKTRYDTEMKDYAPARGGR 85
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 63/99 (63%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G T RKKKD NAPK+P SA+ ++ ++ R +K ++P ++ EIAKK GELW SSK++A
Sbjct: 85 GKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRA 144
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
+++K K +E Y + + AY+ GG G+ + S K
Sbjct: 145 PFEQKAGKLREKYEKEVAAYRAGGGASKRGPGRPTGSVK 183
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N PK SAY + R++ K+ P ++F+E +KK E WK++++ +K ++++
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
K Y+ +K Y G GKT + KK
Sbjct: 63 MAKADKVRYDREMKTYVPPKG-----VGKTGRKKK 92
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ +D R KIK+DNPGIS +IAKK GE+W T S+K+KA Y+ K +
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGEMWATQSAKDKAPYEAKAAR 150
Query: 610 AKEDYNEALKAYKESGG 626
KE Y + + AY+ GG
Sbjct: 151 LKEKYEKDVAAYRAKGG 167
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ S+Y + RE+ KK +PG ++F E +KK E WKT+S KEK +++E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 AKNDKVRYDREMKTY 77
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
K + GG KRKKKD NAPK+ MSA+ M+ D R K++ +P EIAK G WK +S
Sbjct: 82 KGAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEIAKILGRQWKEIS 141
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHK 656
+KA+Y++K K Y + L YK +GGG PAKK A A P +
Sbjct: 142 DSDKAKYEKKAQTEKARYQKELAEYKRTGGGAS-----------PAKKGRPAKKAPPPKR 190
Query: 657 V 657
V
Sbjct: 191 V 191
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KDKN PK MSAY + + R++ +K P + FTE +KK E WKT++ EK + +
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 607 VNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
K Y + Y G ++ G+ + KK
Sbjct: 64 AETDKRRYEREMAKYVPPKG---AEGGRRKRKKK 94
>gi|269864902|ref|XP_002651736.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220063973|gb|EED42320.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 349
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 60/343 (17%)
Query: 60 WALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKELSVRGWNWGGTKFIGNVL 119
+ LRI + G + E+++ I F I++ EL G F N+L
Sbjct: 54 YCLRIITETGC-YDILNVDESQLIPIKQRASEYFGINLINTELETLNTTEGNLVFSNNIL 112
Query: 120 SFDVNNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDEAAESLIEMRFYIPTNEIAGDTDPV 179
+ + F IP KN A E ++E+ NE V
Sbjct: 113 TLH-SEKPVFSIP----------KN-----------AIEHIVEL-----GNEFQFHLKDV 145
Query: 180 EAFKDSVMNQASVI-NATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHGKTFDYKIPIS 238
E + N + + N D + + + C++PR R + F + F+ G ++D+ I
Sbjct: 146 EIVLSTTSNAINFLKNKVNDEVCIVTNVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYK 205
Query: 239 TVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEK 298
V + L + + ++ L+ PI QGQTRY ++F+ D+ E+E+ + L+E
Sbjct: 206 DVTNVLFL--ETDTDTYLLLRLETPIVQGQTRYE--GMVFSLDK-KEIEVSARDGRLQEY 260
Query: 299 YEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSA---VTCSYKAAAGYIYP 355
Y G D EV+ +I++ ++ G T A + C+ K GY++
Sbjct: 261 YHGGQD--------EVVVEIIEKLI-----------GSTAREAKFYIKCTNKVNDGYLFF 301
Query: 356 LERGFIFIHKPPIHIRFEEIATVNFARSGGST---RSFDFEIE 395
++ G F+ KP + EEI V F+R GGS +SFD ++
Sbjct: 302 MDTGLQFLPKPTF-LSIEEIKAVEFSRIGGSVLQGKSFDMTVQ 343
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
K + GG KRKKKD NAPK+ MSA+ M+ D R K++ +P +IAK G+ WK +S
Sbjct: 81 KGAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEIS 140
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHK 656
+KA+Y++K K Y + L YK SGGG PAKK A A P +
Sbjct: 141 DSDKAKYEKKAQTEKARYQKELAEYKRSGGGAS-----------PAKKGRPAKKAPPPKR 189
Query: 657 V 657
V
Sbjct: 190 V 190
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KDKN PK MSAY + + R + +K P + FTE ++K WKT++ EK +
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 607 VNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
K Y + + Y G ++ G+ + KK
Sbjct: 63 AEADKRRYEQDMAKYVPPKG---AEGGRRKRKKK 93
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 531 RKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
RK+K +E+ G RKKKD NAPK+ +SAYM + ND R+K++++NPGISF ++ K GE
Sbjct: 8 RKTKATRETGG----RKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGE 63
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
WK++S KE+ Y++K K+ Y + AYK
Sbjct: 64 KWKSLSDKERKPYEDKAAADKKRYEDEKAAYK 95
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+ +SAYM + NDMR+K++++NPGI F E+ K GE WK +S K++A Y+
Sbjct: 19 KKKKDPNAPKRGLSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEA 78
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDD 632
K K+ Y + AY + GG D D+
Sbjct: 79 KAANDKKRYEDEKAAY--NAGGDDEDE 103
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ +D R K+K DNPGIS +IAKK GE+W +S KEK+ Y++K K
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMK 150
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETA 648
KE Y + + AY+ G D K +PA KK A
Sbjct: 151 LKEKYEKDVAAYRAK--GVKPDGAKKGGPGRPAGKKAEA 187
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N P+ S+Y + RE+ KK NPG ++F+E +KK E W+T+SSKEK +++E
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
KD NAPKK ++A+M + N R+K+K DNPG+SF E+ K GE WK++ + EK+EY+EK
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 609 KAKEDYNEALKAYKE 623
K KE Y + ++AYKE
Sbjct: 136 KDKERYAKEMEAYKE 150
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKV 607
+KDKNAPKKP++AY ++ ND R+K+ K+NP +S TEI+K G+ W+ S+K+K +++K
Sbjct: 15 RKDKNAPKKPLTAYFIFMNDCRQKVIKENPSLSITEISKLVGKKWRETSTKDKEPFNKKA 74
Query: 608 NKAKEDYNEALKAYKES 624
K +E+YN+ L+ Y S
Sbjct: 75 AKLREEYNKKLEKYNNS 91
>gi|221219180|gb|ACM08251.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 102
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 66/102 (64%)
Query: 1 MTEALEFQEVSSEFRGALCPGKLKITDQNIVFKNKKTGKVEQINGPDLDFVNWQKLVGTW 60
M + LEF E+ E +G+ G+L+ + QN+V+K+ KTGKV+ I +L W+++
Sbjct: 1 MGDTLEFNEIYQESKGSWNDGRLRFSKQNLVYKSSKTGKVDNIPAAELSQATWRRVCLGH 60
Query: 61 ALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDVPEKEL 102
+++ +G ++++ GF++T+ ++I FFK N+K+++ EK +
Sbjct: 61 GIKLATSSGHVYKYDGFRDTDYERISEFFKANYKVELTEKNI 102
>gi|729730|sp|P40623.1|HMG1B_CHITE RecName: Full=Mobility group protein 1B
gi|156589|gb|AAA21713.1| high mobility group protein 1b [Chironomus tentans]
Length = 110
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PK+P+SAYM+W N RE IK++NP TE+AKKGGELW+ + K+K+E++ K AK++
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPDFKVTEVAKKGGELWRGL--KDKSEWEAKAATAKQN 62
Query: 614 YNEALKAY 621
Y AL+ Y
Sbjct: 63 YIRALQEY 70
>gi|56756695|gb|AAW26520.1| SJCHGC07008 protein [Schistosoma japonicum]
Length = 213
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 46/187 (24%)
Query: 480 FNPDQAE-SDVAEEYDSNPTPT-------------------------------------D 501
F P +++ S++AEEYDSN T D
Sbjct: 14 FKPPESDGSELAEEYDSNVQTTTSEEDSEDNDEDDDDGDADGNGNKNNARKKDKRDDSSD 73
Query: 502 SDE---DSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKK--KDKNAPKK 556
DE DS +S+ K K++K ++ S +PRK + +SS TK++K KD NAP +
Sbjct: 74 LDEEEADSLSSDVEPKPKQKKLKEEPKTSNRPRKD--ETKSSKRQTKKQKKPKDPNAPTR 131
Query: 557 PMSAYMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
P+SAY +WFN+ REKI K G S E+AK GGELW+ + S+ K+ Y +V++ K+ Y
Sbjct: 132 PLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNMDSETKSTYQSRVDELKKKYQ 191
Query: 616 EALKAYK 622
E L+ Y+
Sbjct: 192 EDLRVYQ 198
>gi|429962227|gb|ELA41771.1| hypothetical protein VICG_01123 [Vittaforma corneae ATCC 50505]
Length = 409
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 24/259 (9%)
Query: 170 NEIAGDTDPVEAFKDSVMNQASVI-NATGDAIAVFNEIQCLTPRGRYDIKIFNSFFQLHG 228
N+I D +E ++ N I + + I + I C+ PR + F+ +F L G
Sbjct: 141 NDIQLDLGDIEIVFNTTSNITHFITDKQSEEICIITGINCINPRSKSTFVFFDDYFVLKG 200
Query: 229 KTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYHFLTLLFNQDETSEMEL 288
++D+ I S + +F L K+ + V+ L+ I QGQTRY L L E+E+
Sbjct: 201 SSYDHTISFSDISEIFFL--KNDSSFYLVLKLENSIVQGQTRYESLVFLLTD---KELEV 255
Query: 289 PFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRKITVPGSFRGHTGTSAVTCSYKA 348
++ LK Y G+ Y+V+ +I++ ++ K C+ K
Sbjct: 256 VANDPRLKNHYFGR--------QYDVLLEIIEGLLKIK--------AQESELFFKCTSKV 299
Query: 349 AAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGS-TRSFDFEIELKSGVLHTFSSI 407
G++Y L +F+ K I I EEI+ V F+R S ++ F++ + + ++ FS I
Sbjct: 300 FDGHLYLLSESLLFLPK-SICIPIEEISHVEFSRINLSVVQAKTFDMTVHASKVYNFSGI 358
Query: 408 EKEEYGKLFDFIREKKLRV 426
+K+ + ++ + EK +++
Sbjct: 359 QKDAFNQIELYFNEKNIKM 377
>gi|195358499|ref|XP_002045217.1| GM13209 [Drosophila sechellia]
gi|194123288|gb|EDW45331.1| GM13209 [Drosophila sechellia]
Length = 111
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
K+P+SAYM+W N RE IK +NPGI TE+AK+GG+LW+ + K+K+E++ K KAK+DY
Sbjct: 6 KRPLSAYMLWLNSARESIKLENPGIKVTEVAKRGGKLWRAM--KDKSEWEAKAAKAKDDY 63
Query: 615 NEALKAY 621
A+K +
Sbjct: 64 YRAVKEF 70
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+K KD NAPKKP+ AYM + DMRE++K +NPG+S T+I K+ GELWK VS ++K +Y +
Sbjct: 16 KKVKDPNAPKKPLGAYMWFCKDMRERVKAENPGMSVTDIGKRLGELWKEVSEEDKKKYLK 75
Query: 606 KVNKAKEDYNEALKAY 621
+ KE YN+ AY
Sbjct: 76 QAEDDKERYNKEAAAY 91
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++F++ KIK + PG+SF ++AKK GE+W ++ +K
Sbjct: 32 GETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQ 91
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSK 639
Y+++ K KE Y + + AY+ G +++G +K
Sbjct: 92 PYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAK 129
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%)
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K +++ G ++KKKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE
Sbjct: 3 KEKSTRQTKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDY 614
WK +S K++A Y+EK K+ Y
Sbjct: 63 WKALSDKQRAPYEEKAAADKKRY 85
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 16/145 (11%)
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKK-KKKEKSRKTITISEKPRKSKKDKE 538
P Q+ D + P+PT S + +G + +++ S+KT+ + E +K K K
Sbjct: 163 LPPAQSPED---RLSTTPSPTSSLHE----DGVEDFRRQLPSQKTVVV-EAGKKQKAPK- 213
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
KR+KKD N P+KP+SAY ++F D + IK NP +F E++K +W ++ +
Sbjct: 214 ------KRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEE 267
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKE 623
+K Y K AK++Y +AL AYK+
Sbjct: 268 QKQVYKRKTEAAKKEYLKALAAYKD 292
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPKKP++++M + N +RE +K +NPGI+F E+ K GE WK +S+ +K EYDEK K
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAK 116
Query: 610 AKEDYNEALKAYKESGG 626
KE Y + +++Y S G
Sbjct: 117 DKERYQKEMESYGGSSG 133
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
TKR KKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE WK ++ K++A Y
Sbjct: 14 TKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPY 73
Query: 604 DEKVNKAKEDYNEALKAY 621
+ K K+ Y + +AY
Sbjct: 74 EAKAAADKKRYEDEKQAY 91
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 531 RKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGE 590
R SKK + S G +KKKD N PK+ +SAYM + N+ R+K++ DNPGI F E+ K+ GE
Sbjct: 9 RGSKKAVDKSAGG--KKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGE 66
Query: 591 LWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
WK +S K+KA Y+ K K+ Y E AY
Sbjct: 67 KWKGLSEKQKAPYEAKAAADKKRYEEEKAAY 97
>gi|346327301|gb|EGX96897.1| High mobility group, superfamily [Cordyceps militaris CM01]
Length = 513
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 512 TKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRK-----KKDKNAPKKPMSAYMMWFN 566
T K E +R+ E +S+ E + G TKRK K D+NAP++P SAY+++ N
Sbjct: 72 TLKSGAEDARQQQLRRECATRSEAGSEPTSGVTKRKYRRHPKSDENAPERPPSAYVLFSN 131
Query: 567 DMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
MRE +K N +SFTEIAK GE W+ + E+ Y+ + N AK+ Y +L YK++
Sbjct: 132 KMREDLKSHN--LSFTEIAKLVGENWQNLDQGERELYENQANAAKDKYRRSLTEYKKT 187
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G KR KKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE WK ++ K++A
Sbjct: 14 GGKKRTKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRA 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
Y+ K K+ Y + +AY
Sbjct: 74 PYEAKAAADKKRYEDEKQAY 93
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ + K K + +R KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K G
Sbjct: 2 PKAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK +S K++A Y+ K K+ Y + +AY
Sbjct: 62 ERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
TKR KKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE WK ++ K++A Y
Sbjct: 15 TKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPY 74
Query: 604 DEKVNKAKEDYNEALKAY 621
+ K K+ Y + +AY
Sbjct: 75 EAKAAADKKRYEDEKQAY 92
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
KR KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K GE WK +S K++A Y+
Sbjct: 15 KRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYE 74
Query: 605 EKVNKAKEDYNEALKAYKESG 625
K K+ Y + +AY G
Sbjct: 75 AKAAADKKRYEDEKQAYNADG 95
>gi|400602743|gb|EJP70345.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 514
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 12/119 (10%)
Query: 511 GTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRK-----KKDKNAPKKPMSAYMMWF 565
G+++ K++ R+ + P +S+ ES+ G TKRK K D++AP++P SAY+++
Sbjct: 76 GSEEGKQQHLRR-----DNPTRSEAGSESTNGVTKRKYRRHPKPDEHAPERPPSAYVLFS 130
Query: 566 NDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
N MRE +K N +SFTEIAK GE W+ + E+ ++ + N AK+ Y +L YK++
Sbjct: 131 NKMREDLKSHN--LSFTEIAKLVGENWQNLDQAERESFENQANVAKDKYRRSLAEYKKT 187
>gi|345567385|gb|EGX50317.1| hypothetical protein AOL_s00076g81 [Arthrobotrys oligospora ATCC
24927]
Length = 551
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%), Gaps = 7/86 (8%)
Query: 544 TKRK-----KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
TKRK + D+NAP+KP SAY+M+ N++RE++K N +SFTEIA+ G+ WK + +
Sbjct: 103 TKRKYRRHPRPDENAPEKPPSAYVMFANNVREELKGQN--LSFTEIARLVGDRWKVLPPE 160
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKES 624
+K EY+ + K+ YN+ L AYK++
Sbjct: 161 QKEEYEYRAGVMKDRYNQELAAYKKT 186
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ + K K + +R KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K G
Sbjct: 2 PKAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK +S K++A Y+ K K+ Y + +AY
Sbjct: 62 ERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K +++ S ++KKKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE
Sbjct: 3 KEKASRKTKARSIEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDD 632
WK ++ K++A Y+ K K+ Y + +Y QD DD
Sbjct: 63 WKALNEKQRAPYEAKAAADKKRYEDEKASY----NAQDEDD 99
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
T+R+KKD NAPK+ +SAYM + ND REK++++NPGISF ++ K GE WK +S ++ Y
Sbjct: 15 TERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPY 74
Query: 604 DEKVNKAKEDYNEALKAY 621
+EK K+ Y + +Y
Sbjct: 75 EEKAAADKKRYEDEKASY 92
>gi|340052816|emb|CCC47102.1| putative high mobility group protein [Trypanosoma vivax Y486]
Length = 271
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
PKKP+S+Y+++ ND REK+K +NP TEI +K G++W S K +Y + + KE
Sbjct: 117 PKKPLSSYLIFSNDHREKLKAENPDAKITEILQKLGQMWSDASEAVKEKYKKLAQEDKER 176
Query: 614 YNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSD 673
+ L YK+SGG + S K + A K+ AVS SKEF + + S ++
Sbjct: 177 FERELNEYKKSGGTEFSRSAKAKNKDENAPKR-----AVSAFMFFSKEFRSKHPNLSMTE 231
Query: 674 DDKKASSKRKRDSDEDSK---AKTKKKKEKSESESDSG 708
K A + + SDE K A +K KE+ E E +G
Sbjct: 232 GSKAAGAAWRELSDEKKKPYEAMAQKDKERYEKEKTTG 269
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 8/93 (8%)
Query: 537 KESSGGSTK--------RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKG 588
KES+ ST+ R+KKD NAPK+ +SAYM + ND R+K++++NPGISF ++ K+
Sbjct: 3 KESTAKSTRKAPEKRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKQL 62
Query: 589 GELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
G+ WK +S ++ YD+K K+ Y E AY
Sbjct: 63 GDKWKALSETDRKPYDDKAAADKKRYEEEKAAY 95
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 535 KDKESSGGSTKR---KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K+K S+ TKR KKKD NAPK+ +SAYM + ND R+K++++NPGISF ++ K GE
Sbjct: 3 KEKTSTRTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
WK +S E+ Y+EK K+ Y + +Y Q+ D+ ++S
Sbjct: 63 WKALSDSERRPYEEKAATDKKRYEDEKASY---NAAQEEDEEESS 104
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 535 KDKESSGGSTKR---KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K+K S+ TKR KKKD NAPK+ +SAYM + N+ R+K++++NPGISF ++ K GE
Sbjct: 3 KEKTSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
WK +S E+ Y+EK K+ Y + +Y QD D+ ++S
Sbjct: 63 WKALSDSERRPYEEKAAADKKRYEDEKASY---NAAQDEDEEESS 104
>gi|339521847|gb|AEJ84088.1| TOX high mobility group box family member 4 [Capra hircus]
Length = 619
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 14/144 (9%)
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
P Q+ D + P+PT S + E +++ S+KT+ + E +K K K
Sbjct: 163 LPPAQSPED---RLSTTPSPTGSLHEDGVEE---FRRQPPSQKTVVV-EAGKKQKAPK-- 213
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
+RKKKD N P+KP+SAY ++F D + IK NP +F E++K +W ++ +
Sbjct: 214 -----RRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEER 268
Query: 600 KAEYDEKVNKAKEDYNEALKAYKE 623
K K AK++Y +AL AYK+
Sbjct: 269 KQVCKRKTEAAKKEYLKALAAYKD 292
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ + K K + +R KKD NAPK+ +SAYM + N+ RE ++++NPG++F ++ K G
Sbjct: 2 PKAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK +S K++A Y+ K K+ Y + +AY
Sbjct: 62 ERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 526 ISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIA 585
I K +K +++ +R+KKD NAPK+ +SAYM + ND R+K++++NPGISF ++
Sbjct: 81 IMPKESTTKSTRKAPEKRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVG 140
Query: 586 KKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
K+ G+ WK +S ++ YD K K+ Y E AY
Sbjct: 141 KQLGDKWKALSETDRKPYDAKAAADKKRYEEEKAAY 176
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K +++ S ++KKKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE
Sbjct: 3 KEKASRKTKPRSIEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDD 632
WK ++ K++A Y+ K K+ Y + +Y QD DD
Sbjct: 63 WKALNEKQRAPYEAKAAADKKRYEDEKASY----NAQDEDD 99
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%)
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K +++ G +RKKKD NAPK+ +SAYM + ND REK++++NPGISF ++ K GE
Sbjct: 3 KEKTTRKTKGTRVERKKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEK 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDY 614
WK +S ++ Y++K K+ Y
Sbjct: 63 WKALSEADRRPYEDKAAADKKRY 85
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G +K+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W SS++K
Sbjct: 83 GESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTSSEDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
+++K K KE Y + + AY+ G
Sbjct: 143 PFEKKAGKLKEKYEKDIAAYRAKG 166
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MARADKVRYEREMKTY 78
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+ +SAYM + N+ R+ ++++NPGISF ++ K GE WK ++ K++A Y+
Sbjct: 16 KKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEA 75
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDD 632
K K+ Y + +Y QD DD
Sbjct: 76 KAAADKKRYEDEKASYNARRKAQDDDD 102
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ S K + KR KKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K G
Sbjct: 2 PKASTKRGAAGKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK ++ K++A Y+ K K+ Y + +AY
Sbjct: 62 ERWKALNDKQRAPYEAKAATDKKRYEDEKQAY 93
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 543 STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAE 602
+ KR KKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE WK ++ K++A
Sbjct: 14 TKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAP 73
Query: 603 YDEKVNKAKEDYNEALKAY 621
Y+ K K+ Y + +AY
Sbjct: 74 YEAKAAADKKRYEDEKQAY 92
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD N PK+ +SAYM + ND R+K+++DNPGI F E+ K GE WK ++ K+KA Y+
Sbjct: 22 KRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKAPYEA 81
Query: 606 KVNKAKEDYNEALKAY 621
K K+ Y E AY
Sbjct: 82 KAAADKKRYEEEKAAY 97
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
+R KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K GE WK +S K++A Y+
Sbjct: 15 RRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYE 74
Query: 605 EKVNKAKEDYNEALKAY 621
K K+ Y + +AY
Sbjct: 75 AKAAADKKRYEDEKQAY 91
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%)
Query: 532 KSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K +++ G +++KKD NAPK+ +SAYM + N+ RE+++ +NPGI+F + +K GEL
Sbjct: 3 KEKTTRKAKRGGVEKRKKDPNAPKRGLSAYMFFANENRERVRDENPGIAFGALGRKLGEL 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
WK +S E+ Y++K K+ Y + Y G
Sbjct: 63 WKGLSDSERKPYEDKAAADKKRYEDQKATYLAGG 96
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 535 KDKESSGGSTKR---KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K+K S+ TKR KKKD NAPK+ +SAYM + N+ R+K++++NPGISF ++ K GE
Sbjct: 3 KEKTSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
WK +S ++ Y+EK K+ Y + +Y QD D+ ++S
Sbjct: 63 WKALSDTDRRPYEEKAAADKKRYEDEKASY---NAAQDEDEEESS 104
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
R+KKD NAPK+ +SAYM + ND REK++++NPGISF ++ K GE WK +S ++ Y+E
Sbjct: 18 RRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYEE 77
Query: 606 KVNKAKEDYNEALKAY 621
K K+ Y + +Y
Sbjct: 78 KAAADKKRYEDEKASY 93
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+
Sbjct: 2 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNN 61
Query: 606 KVNKAKEDYNEALKAYKESG 625
K K KE Y + + YK G
Sbjct: 62 KAAKLKEKYEKDVADYKSKG 81
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
K+K++D NAPKKP++A+ ++ R+K+ + NP I T+I++ G W ++S +EK Y
Sbjct: 43 KKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEIKLTQISQMAGNKWTSMSEQEKKPYL 102
Query: 605 EKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
++ N AKE Y++ LK Y E G +++D K KS+K
Sbjct: 103 DQYNAAKEKYDQELKDYNEKNGI-ETNDKKRKKSEK 137
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
RKKKD NAPK+P SA+ ++ + R K++ +NPG++ IAKK GE+W + EK+ Y+
Sbjct: 88 RKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYER 147
Query: 606 KVNKAKEDYNEALKAYKESGGGQDS 630
K K KE Y++ + +Y+ G + S
Sbjct: 148 KTAKLKEKYDKDMASYRSKGKVETS 172
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK NP ++F E +KK E WKT+S KEK +++ K Y+
Sbjct: 13 MSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYD 72
Query: 616 EALKAYKESGGGQDS 630
+K Y G + S
Sbjct: 73 REMKTYVPPKGERGS 87
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
RKKKD NAPK+P SA+ ++ + R K++ +NPG++ IAKK GE+W + EK+ Y+
Sbjct: 88 RKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYER 147
Query: 606 KVNKAKEDYNEALKAYKESGGGQDS 630
K K KE Y++ + +Y+ G + S
Sbjct: 148 KTAKLKEKYDKDMASYRSKGKVETS 172
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK NP ++F E +KK E WKT+S KEK +++ K Y+
Sbjct: 13 MSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYD 72
Query: 616 EALKAYKESGGGQDS 630
+K Y G + S
Sbjct: 73 REMKTYVPPKGERGS 87
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 535 KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKT 594
KD ES+ G +KKKD NAPK+P S + ++ ++ R KIK NPGIS ++ KK GE+W
Sbjct: 90 KDYESAKGG--KKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWNN 147
Query: 595 VSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
+S EK Y K K KE Y + + YK +G
Sbjct: 148 LSDSEKQPYMTKAAKLKEKYEKDVADYKSNG 178
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ K NP ++F E +KK E WKT+SSKEK+++DE K Y
Sbjct: 27 MSAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYG 86
Query: 616 EALKAYKESGGGQDSDD 632
+K Y+ + GG+ D
Sbjct: 87 REMKDYESAKGGKKKKD 103
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 61/98 (62%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++F++ KIK + PG+S + AKK GE+W ++ +K
Sbjct: 110 GETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSIGDAAKKLGEMWNNTAADDKQ 169
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSK 639
Y+++ K KE Y + + AY+ G +++G +K
Sbjct: 170 PYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAK 207
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+ +SAYM + ND R+ I+ DNPGI+F ++ K GE WKT++ EK Y+EK
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATA 80
Query: 610 AKEDYNEALKAYKESGG 626
K+ Y + AYK +
Sbjct: 81 DKKRYEDEKAAYKANAA 97
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ + R K+K++ PG+S ++AKK GE+W SS+EK
Sbjct: 71 GEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEKQ 130
Query: 602 EYDEKVNKAKEDYNEALKAYKESG--GGQDSDDGKTSKS 638
Y++K + KE Y + + AY+ G GG K K+
Sbjct: 131 PYEKKAARLKEKYEKDITAYRSKGKVGGPAKAPSKPDKA 169
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYE 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKNY 66
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ SK K + G ++KKKD NAPK+ +SAYM + N+ RE ++++NPGISF ++ K G
Sbjct: 2 PKASKSSK--TKGRGEKKKKDPNAPKRGLSAYMFFANEQRESVREENPGISFGQVGKVLG 59
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDD 632
+ WK ++ K++ Y++K K+ Y + Y+ G D D+
Sbjct: 60 DRWKALNEKQREPYEKKAQADKKRYEDEKAKYQAGGDASDDDE 102
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 537 KESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVS 596
K+S+ +R KKD APK+ +SAYM + N+ R+ ++++NPG++F ++ K GE WK +S
Sbjct: 7 KKSAKPEKRRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALS 66
Query: 597 SKEKAEYDEKVNKAKEDYNEALKAYKESGGGQD 629
K++A YD K K+ Y + AY ++GG +D
Sbjct: 67 DKQRAPYDAKAAADKKRYEDEKAAY-QAGGDED 98
>gi|154416490|ref|XP_001581267.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915493|gb|EAY20281.1| hypothetical protein TVAG_192570 [Trichomonas vaginalis G3]
Length = 493
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 191/462 (41%), Gaps = 45/462 (9%)
Query: 38 GKVEQINGPDLDFVNWQKLVGTWALRIFLKNGSLHRFAGFKETEIDKICSFFKTNFKIDV 97
GK I ++D +W ++ + + + + F+ + K+ + K ++
Sbjct: 31 GKTVTIEKGEIDHADWSQISRDFYCLYLMVGERFYSISKFQIGDKSKLFAALKNQLDVEA 90
Query: 98 PEKELSVRGWNWGGTKFIGNVLSFDV--NNTTAFEIPLRDVSQCTTGKNEVTVEFHPNDE 155
E++LS+ G N G F + +F + + ++P + +S + KN+ V+
Sbjct: 91 NEEDLSISGLNEG--VFFHDKHTFGIKDDGKPVIKVPYKTISNVQSSKNDFFVQILQEGR 148
Query: 156 A-AESLIEMRFYIPTNEIAGDTDPVEAFKDSVMNQASVINATGDAIAVFNEIQCLTPRGR 214
L +R ++P N D V + M Q + A+ + A N++ P G
Sbjct: 149 IEGHQLENVRIFVPQNGAEKVQDIVANIR-GYMKQHT---ASENYFAQINDLTLKQPSGN 204
Query: 215 YDIKIF--NSFFQLHGKTFDYKIPISTVLRMFTLPHKDGRQNFFVISLDPPIKQGQTRYH 272
D + N F Q F K ++ F++P D + + +I+L P ++G+T Y
Sbjct: 205 ADFRYCEDNLFIQFQEVNFQIKYSNIRLIHRFSIP--DSKNEYVLITLSHPFRRGRTDYD 262
Query: 273 FLTLLFNQDETSEMELPFSEQELKEKYEGKLDKELSGPTYEVMAKIMKVIVNRK-ITVPG 331
+ + + DE +++ L + +KE E + K + N+K +
Sbjct: 263 NIVVQTSDDEVAKI-LNIPDSTMKES--------------EAIVKFFEQYANKKEVEHDN 307
Query: 332 SFRGHTGTSAVTCSYKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGST---- 387
F GT+A+ S+K Y++ F+ + K + I F+ + V F R T
Sbjct: 308 FFLSSDGTNAIFGSWKGNQNYLFITNSHFVILPKSKV-IPFDAVRHVEFTRIDADTMRNN 366
Query: 388 RSFDFEI-ELKSGVLHTFSSIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDD 446
+ FD I E S F +I +E+ L +F ++ L + N N EDF +
Sbjct: 367 KFFDLAITETGSNKPIDFMNIPHKEFVLLLNFFKKAGLTIHNY------NLAEDFATIIS 420
Query: 447 EKEPDAYLARVKREAAERDDEDDEDE----DESTDEDFNPDQ 484
+ +R+ + R++ + ++ DE DEDFNPD+
Sbjct: 421 RDRGEGRGSRLAADIKIREEAKEMNKISDSDEEEDEDFNPDK 462
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R K+K ++PG++ E+AKK GELW +S++K Y++K +K
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGLTIGEVAKKLGELWNNTNSEDKQPYEKKASK 154
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAK 643
KE Y + + AY+ Q + G S K PAK
Sbjct: 155 LKEKYEKDVAAYR-----QKTKGGSGSAGKAPAK 183
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 554 PKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
P+ MS+Y + RE+ KK +P ++F+E ++K E WKT+S KEK ++++ + K
Sbjct: 12 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDLAKQDK 71
Query: 612 EDYNEALKAY 621
Y+ + Y
Sbjct: 72 VRYDREMMDY 81
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G T++KKKD NAPK+ +SAYM + N+ RE ++++NPGI+F ++ K GE WK ++ K++
Sbjct: 13 GRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRT 72
Query: 602 EYDEKVNKAKEDYNEALKAY 621
Y+ K + K+ Y + +Y
Sbjct: 73 PYEAKAAQDKKRYEDEKASY 92
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
R KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K GE WK +S K++A Y+
Sbjct: 18 RGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEA 77
Query: 606 KVNKAKEDYNEALKAY 621
K K+ Y + +AY
Sbjct: 78 KAAADKKRYEDEKQAY 93
>gi|408397883|gb|EKJ77020.1| hypothetical protein FPSE_02664 [Fusarium pseudograminearum CS3096]
Length = 537
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 508 ASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRK-----KKDKNAPKKPMSAYM 562
AS T + + K+ ++ +P +++ E G KRK K D+NAP++P SAY+
Sbjct: 67 ASLATPARPTSEEVKSESVQPEPSRTETPPEGHG-VAKRKYRRHPKPDENAPERPPSAYV 125
Query: 563 MWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
++ N MRE ++ N ++FTEIAK GE W+ +++ EK Y+ + N KE Y+ L YK
Sbjct: 126 LFSNKMREDLRSQN--LTFTEIAKLVGENWQNLNASEKEAYESQANADKEKYHRDLVEYK 183
Query: 623 ESG 625
++
Sbjct: 184 KTA 186
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++ K KE Y + + AY+ G
Sbjct: 143 PYEKXAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 534 KKDKESSGGSTK--RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGEL 591
K K SG + K R+KKD NAPK+ +SAYM + N+ R+ ++++NPG+SF ++ K GE
Sbjct: 3 KAAKSRSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGER 62
Query: 592 WKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
WK +S K++A Y+ K K+ Y + +AY
Sbjct: 63 WKALSDKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ + K + KR KKD NAPK+ +SAYM + N+ RE ++++NPG+SF ++ K G
Sbjct: 2 PKAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
E WK +S K++ Y+ K K+ Y + AY S
Sbjct: 62 ERWKALSDKQRTPYEAKAAADKKRYEDEKAAYNSS 96
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD +APK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K +K KE Y + + AY+ G
Sbjct: 143 PYEKKASKLKEKYEKDIAAYQAKG 166
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKVRYE 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKTY 78
>gi|384491112|gb|EIE82308.1| hypothetical protein RO3G_07013 [Rhizopus delemar RA 99-880]
Length = 425
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
+ K D+NAP KP SAY+M+ ND R K+K N +SF E+AK G+ WK +S EK Y+
Sbjct: 177 RHAKPDRNAPIKPPSAYVMFSNDARAKLKNQN--LSFAELAKVVGDQWKNLSYYEKQAYE 234
Query: 605 EKVNKAKEDYNEALKAYKESG 625
K +AK++Y AL+ Y+++
Sbjct: 235 RKATRAKDEYLAALEHYRQTN 255
>gi|324507316|gb|ADY43106.1| FACT complex subunit Ssrp1 [Ascaris suum]
Length = 538
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 201/475 (42%), Gaps = 106/475 (22%)
Query: 195 ATGDAIAVF---NEIQCLTPRGRYDIKIFNSFFQLHGKTFD----YKIPISTVLRMFTLP 247
A GDA+ + I ++P G++ + I L K+ D Y IPI ++ R+F LP
Sbjct: 94 AEGDALVTLLAADGIIGISPEGKFHVIINKEDIIL--KSDDGGQQYTIPIDSIGRIFVLP 151
Query: 248 HKDGRQNFFV-ISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKE 306
++ +FFV ++L P+ ++ L ELP ++ K+E K++K
Sbjct: 152 QEN---HFFVALALIAPLMTADWPTGYVVL----------ELPLGKE--VSKFEEKIEKS 196
Query: 307 ----------LSGPTYEVMAKIMKVIVNRKITVPGSFRGH-----------TGTSAVTCS 345
+SGP E + + M +++ S G + +V C+
Sbjct: 197 EQVGDGASGPVSGPINEQLTEAMPRLLS-------SLSGLDAEKSVLESSPSMLLSVVCT 249
Query: 346 YKAAAGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFS 405
Y +G ++PLE GF F+HK P HI F ++ +F S GS + D + +K + F
Sbjct: 250 YDGKSGCLFPLEDGFFFLHKYPTHIAFSDVFKADFIDSKGSDKQSDLVLTMKDSTMVKFC 309
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERD 465
+IEK ++ +L F E+ R+ G+ R++REAA
Sbjct: 310 NIEKNDFYRLDVFGIEQ--RIVEGGR------------------------RLRREAASGS 343
Query: 466 DED-DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED------SDASEGTKKKKKE 518
ED ++S D+D+ D+A+ EE D +P+ +DS+ + SD + T++ E
Sbjct: 344 KLTVTEDVEDSDDDDYLEDRAKVKEKEEGDESPSESDSEGEPLEEYESDVQDTTQEDIDE 403
Query: 519 KSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG 578
+ + E + D+ G+ + ++NA KK ++ ++ E + +
Sbjct: 404 EVEEDEEREEDVVEGSNDQN---GNEQAPGNEENADKKGVTGARKNVMEVVEAGEANV-- 458
Query: 579 ISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
++ + +KG KE V K E N KE GGQ+ D G
Sbjct: 459 LANVDKERKG---------KESTGEGRSVEKGTESAN------KEEVGGQEKDSG 498
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P++ +++ G ++KKKD NAPK+ +SAYM++ N+ R ++++NP I+F ++ K G
Sbjct: 2 PKEKSTARKAKGRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK +S K++ Y+EK K+ Y + AY
Sbjct: 62 ERWKALSDKQRVPYEEKAATDKQRYEDEKAAY 93
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK++ KD NAPK+P SA+ ++ +D R KIK ++PG + +IAKK GE+W ++ +K
Sbjct: 82 GETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKL 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ + K KE Y + + AY+ G
Sbjct: 142 PYERRAAKLKEKYEKDVAAYRAKG 165
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F E +KK E WKT+ SKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTM-SKEKTKFED 61
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K+Y
Sbjct: 62 MAKADKVRYEREMKSY 77
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK++ KD NAPK+P SA+ ++ +D R KIK ++PG + +IAKK GE+W ++ +K
Sbjct: 82 GETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKL 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ + K KE Y + + AY+ G
Sbjct: 142 PYERRAAKLKEKYEKDVAAYRAKG 165
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F E +KK E WKT+ SKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTM-SKEKTKFED 61
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K+Y
Sbjct: 62 MAKADKVRYEREMKSY 77
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
+ GS+K+ KD NAPK+P+SA+ ++ D R IKK +P +S +I+K+ G WK VS
Sbjct: 4 AAGSSKKASKDPNAPKRPLSAFFLFSQDERPDIKKKSPSLSVGDISKEIGSRWKKVSDDV 63
Query: 600 KAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
+ Y++K K+ Y + YK+SGGG S K K+
Sbjct: 64 RKRYEQKAADEKKKYEVRVAEYKKSGGGASSSPAKGGKA 102
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R K+K ++PG++ + AKK GE+W + S++ K
Sbjct: 82 GQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ K K KE Y++ + AY+ G
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKG 165
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD PK MS+Y + RE+ KK +P ++F E +KK E WKT+S K K ++++
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKLDKVRYERDMKNY 77
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG + +IAKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKL 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ K K KE Y + + AY+ G
Sbjct: 143 PYERKAAKLKEKYEKDVAAYRAKG 166
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|118344416|ref|NP_001072029.1| transcription factor protein [Ciona intestinalis]
gi|70569048|dbj|BAE06340.1| transcription factor protein [Ciona intestinalis]
Length = 410
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
N P+KP+SAY ++F D + IK DNP +F EI+K +W ++S + K Y K AK
Sbjct: 35 NEPQKPVSAYALFFRDTQAAIKADNPSATFGEISKIVASMWDSLSEEAKQIYKMKTETAK 94
Query: 612 EDYNEALKAYKE---SGGGQDSDD 632
DY + L AY+ S GG D+DD
Sbjct: 95 RDYLKQLAAYRANLVSRGGLDADD 118
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ KIK ++PG+S ++AKK GELW ++++K
Sbjct: 71 GETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQ 130
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y +K K KE + + + AY+ G + G
Sbjct: 131 PYGKKAAKLKEKHEKGIAAYRAKGKPNAAKTG 162
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYE 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKTY 66
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R K+K ++PG++ + AKK GE+W + S++ K
Sbjct: 82 GQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ K K KE Y++ + AY+ G
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKG 165
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD PK MS+Y + RE+ KK +P ++F E +KK E WKT+S KEK ++++
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKLDKVRYERDMKNY 77
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K KE Y + + AY+ G
Sbjct: 143 PYEKKAAILKEKYEKDIAAYRTKG 166
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++ +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQD 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKVHYEREMKTY 78
>gi|303282319|ref|XP_003060451.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226457922|gb|EEH55220.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 922
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P+SAY+++ D R K+ K+NP + TEI G WK + +K+KA+Y+ K AK
Sbjct: 806 NAPKRPLSAYILFSGDARAKVVKENPEMKATEIIAAIGAKWKAIGAKDKAKYEAKATAAK 865
Query: 612 EDYNEALKAYKESGGGQDSDDGKTSKSKKPA 642
E Y+E K+Y+ S G S+S++PA
Sbjct: 866 EKYDEEKKSYEASKAA-----GTESESEEPA 891
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P +AY+++ ND R K++K +P +S EI W+ S KEKA+Y+ K +
Sbjct: 697 DPNAPKRPPNAYILFSNDARAKLQKQHPEMSPKEIMSTLAAQWQNASEKEKAKYEAKTKE 756
Query: 610 AKEDYNEALKAY 621
AKE Y+ A Y
Sbjct: 757 AKEAYDVASAEY 768
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 556 KPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
+P +AYM++ NDMR + +++P +S E K G W+ + K+KA Y+ K KE Y
Sbjct: 591 RPANAYMLFANDMRAAVAEEHPEMSMVERGKVLGAKWRAIGEKDKARYETKAAAEKERYA 650
Query: 616 EALKAY 621
E +K Y
Sbjct: 651 EEMKHY 656
>gi|324508756|gb|ADY43693.1| FACT complex subunit Ssrp1 [Ascaris suum]
Length = 623
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 203/473 (42%), Gaps = 98/473 (20%)
Query: 195 ATGDAIAVF---NEIQCLTPRGRYDIKIFNSFFQLHGKTFD----YKIPISTVLRMFTLP 247
A GDA+ + I ++P G++ + I L K+ D Y IPI ++ R+F LP
Sbjct: 94 ADGDALVTLLAADGIIGISPEGKFHVIINKEDIIL--KSDDGGQQYTIPIDSIGRIFVLP 151
Query: 248 HKDGRQNFFV-ISLDPPIKQGQTRYHFLTLLFNQDETSEMELPFSEQELKEKYEGKLDKE 306
++ +FFV ++L P+ ++ L ELP ++ K+E K++K
Sbjct: 152 QEN---HFFVALALIAPLMTADWPTGYVVL----------ELPLGKE--VSKFEEKIEKS 196
Query: 307 ----------LSGPTYEVMAKIMKVIVN-------RKITVPGSFRGHTGTSAVTCSYKAA 349
+SGP E + + M +++ K + S + +V C+Y
Sbjct: 197 EQVGDGASGPVSGPINEQLTEAMPRLLSSLSGLDAEKSVLESS---PSMLLSVVCTYDGK 253
Query: 350 AGYIYPLERGFIFIHKPPIHIRFEEIATVNFARSGGSTRSFDFEIELKSGVLHTFSSIEK 409
+G ++PLE GF F+HK P HI F ++ +F S GS + D + +K + F +IEK
Sbjct: 254 SGCLFPLEDGFFFLHKYPTHIAFSDVFKADFIDSKGSDKQSDLVLTMKDSTMVKFCNIEK 313
Query: 410 EEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSDDEKEPDAYLARVKREAAERDDED- 468
++ +L F E+ R+ G+ R++REAA
Sbjct: 314 NDFYRLDVFGIEQ--RIVEGGR------------------------RLRREAASGSKLTV 347
Query: 469 DEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDED------SDASEGTKKKKKEKSRK 522
ED ++S D+D+ D+A+ EE D +P+ +DS+ + SD + T++ E+ +
Sbjct: 348 TEDVEDSDDDDYLEDRAKVKEKEEGDESPSESDSEGEPLEEYESDVQDTTQEDIDEEVEE 407
Query: 523 TITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT 582
E + D+ G+ + ++NA KK ++ ++ E + + ++
Sbjct: 408 DEEREEDVVERSNDQN---GNEQAPGNEENADKKGVTGARKNVMEVVEAGEANV--LANV 462
Query: 583 EIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKT 635
+ +KG KE +V K E N KE GGQ+ D G
Sbjct: 463 DKERKG---------KESTGEGRRVEKGTESAN------KEEVGGQEKDSGSV 500
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W + +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVYDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y +K K KE Y + + AY+ G
Sbjct: 143 PYGKKAAKLKEKYEKDIAAYRAKG 166
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P+ + K + KR KKD NAPK+ +SAYM + N+ R+ ++++NPG+SF ++ K G
Sbjct: 2 PKAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
E WK +S K++ Y+ K K+ Y + AY S
Sbjct: 62 ERWKALSEKQRVPYEAKAAADKKRYEDEKAAYNSS 96
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
K+K++D NAPKKP++ + ++ REK+ NP I T+I++ G W ++S +EK Y
Sbjct: 42 KKKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEIKLTQISQMAGNKWSSMSEQEKKPYV 101
Query: 605 EKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
++ N AKE Y + LK Y E G +++D K KS+K
Sbjct: 102 DQYNAAKEKYEQELKDYNEKNGI-ETNDKKRKKSEK 136
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ ++ R K+K++ PG+S ++AKK GE+W S++EK
Sbjct: 71 GEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQ 130
Query: 602 EYDEKVNKAKEDYNEALKAYKESG--GGQDSDDGKTSKS 638
+++K + KE Y + + AY+ G GG K K+
Sbjct: 131 PFEKKAARLKEKYEKDITAYRSKGKVGGPAKAPSKPDKA 169
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ + K Y
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYE 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKNY 66
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD NAPK+ +SAYM + D R KIK D+P +SF E K GE WK +S+ EK +++
Sbjct: 23 KEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDVSFGETGKLLGEKWKAMSAAEKKPFED 82
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPA 642
K K + KAY +GGG+ KTSK KPA
Sbjct: 83 LAAKDKLRAEKDKKAYLATGGGEK----KTSKKSKPA 115
>gi|118343695|ref|NP_001071666.1| transcription factor protein [Ciona intestinalis]
gi|70569042|dbj|BAE06339.1| transcription factor protein [Ciona intestinalis]
Length = 635
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
N P+KP+SAY ++F D + IK DNP +F EI+K +W ++S + K Y K AK
Sbjct: 260 NEPQKPVSAYALFFRDTQAAIKADNPSATFGEISKIVASMWDSLSEEAKQIYKMKTETAK 319
Query: 612 EDYNEALKAYKE---SGGGQDSDD 632
DY + L AY+ S GG D+DD
Sbjct: 320 RDYLKQLAAYRANLVSRGGLDADD 343
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ KIK ++PG+S ++AKK GELW ++++K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y +K K KE + + + AY+ G
Sbjct: 143 PYGKKAAKLKEKHEKGIAAYRAKG 166
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y + K KE Y + + AY+ G
Sbjct: 143 PYGKMAAKLKEKYEKDIAAYRAKG 166
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK + ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 70.9 bits (172), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+ +SAYM + N+ RE ++ DNPGI+F ++ K GE WK +S K++ Y+
Sbjct: 15 QKKKDPNAPKRGLSAYMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEA 74
Query: 606 KVNKAKEDYNEALKAYKESGG 626
K K+ Y + AY GG
Sbjct: 75 KAAADKKRYEDEKAAYNAQGG 95
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R ++K + PG+S ++AKK GE W +++++K
Sbjct: 82 GEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKV 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K +K KE Y + + AY+ G
Sbjct: 142 PYEKKASKLKEKYEKDITAYRNKG 165
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + R + KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +++Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R ++K + PG+S ++AKK GE W +++++K
Sbjct: 82 GEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKV 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K +K KE Y + + AY+ G
Sbjct: 142 PYEKKASKLKEKYEKDITAYRNKG 165
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +++Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD NAPK+P SA+ ++ + R +IK DNPG+ +IAK+ G LW + K+K ++
Sbjct: 89 KRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKLPHEA 148
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
K K KE Y + + AYK GG G T+KS
Sbjct: 149 KATKLKEKYEKDVAAYKAKGGA-----GATAKS 176
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N PK S+Y + RE+ KK +PG ++F+E +KK E W+T+S+KEK ++++
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 607 VNKAKEDYNEALKAY 621
K Y++ +K Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++ KD NAPK+P S + ++ ++ R KIK NPGIS +IAKK GE+W +S EK Y+
Sbjct: 85 KRNKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQPYNN 144
Query: 606 KVNKAKEDYNEALKAYKESG 625
K K KE Y + + YK G
Sbjct: 145 KAAKLKEKYEKDVADYKSKG 164
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI--SFTEIAKKGGELWKTVSSKEKAEYDE 605
K+D PK MSAY + RE+ KK NP I +F E +KK E W+++S KEK+++++
Sbjct: 3 KRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDD 632
K Y+ +K + G+ + D
Sbjct: 63 LAKADKVRYDREMKDFGPVKKGKRNKD 89
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+K+KD NAPK+P SA+ ++ ++ R KIK D+PG+S + AKK GE+W ++K+K +++
Sbjct: 85 KKRKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGLSIGDTAKKLGEMWSLQTAKDKLPFEQ 144
Query: 606 KVNKAKEDYNEALKAYK 622
K K KE Y++ + AY+
Sbjct: 145 KALKLKEKYDKDIAAYR 161
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E W+T+S+KEK ++++
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+ K K K Y + AY+ G
Sbjct: 143 PYERKAAKLKGKYEKDTAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D+ P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 163
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 164 LKEKYEKDVADYKSKG 179
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEKA++DE K Y+
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 87
Query: 616 EALKAY 621
+K Y
Sbjct: 88 REMKDY 93
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG + +IAKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKL 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
++ K K KE Y + + AY+ G
Sbjct: 143 PFERKAAKLKEKYEKDVAAYRAKG 166
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P++ ++S ++KKKD NAPK+ +SAYM + N+ R+ ++++NPGISF ++ K G
Sbjct: 2 PKEKVSSRKSKSRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK ++ K++A Y+ K K+ Y + +Y
Sbjct: 62 ERWKALNEKQRAPYEAKAAADKKRYEDEKASY 93
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD NAPK+P SA+ ++ + R +IK DNPG+ +IAK+ G LW + K+K ++
Sbjct: 89 KRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEA 148
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
K K KE Y + + AYK GG G T+KS
Sbjct: 149 KAAKLKEKYEKDVAAYKAKGGA-----GATAKS 176
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N PK S+Y + RE+ KK +PG ++F+E +KK E W+T+S+KEK ++++
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 607 VNKAKEDYNEALKAY 621
K Y++ +K Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD NAPK+P SA+ ++ + R +IK DNPG+ +IAK+ G LW + K+K ++
Sbjct: 89 KRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEA 148
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
K K KE Y + + AYK GG G T+KS
Sbjct: 149 KAAKLKEKYEKDVAAYKAKGGA-----GATAKS 176
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N PK S+Y + RE+ KK +PG ++F+E +KK E W+T+S+KEK ++++
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 607 VNKAKEDYNEALKAY 621
K Y++ +K Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|159478601|ref|XP_001697391.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274549|gb|EDP00331.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 99
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPKKPM AYM + +MRE++K DNP S T+I ++ GELWK +K ++ + +K
Sbjct: 18 DPNAPKKPMGAYMWFCKEMREQVKADNPEFSVTDIGRRLGELWKECEDDDKKKFQDLADK 77
Query: 610 AKEDYNEALKAYK 622
KE YN+ AY+
Sbjct: 78 DKERYNKENAAYQ 90
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
++KKD NAPK+P SA+ ++ + R +IK DNPG+ +IAK+ G LW + K+K ++
Sbjct: 89 KRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKLPHEA 148
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKS 638
K K KE Y + + AYK GG G T+KS
Sbjct: 149 KAAKLKEKYEKDVAAYKAKGGA-----GATAKS 176
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD N PK S+Y + RE+ KK +PG ++F+E +KK E W+T+S+KEK ++++
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 607 VNKAKEDYNEALKAY 621
K Y++ +K Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|348540020|ref|XP_003457486.1| PREDICTED: TOX high mobility group box family member 4-like
[Oreochromis niloticus]
Length = 687
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 439 EDFG-SSDDEKEPDAYLARVKREAAERDDEDDEDEDESTDEDFNPDQAESDVAEEYDSNP 497
E+ G S+ K+P L+ A DED +D +S D + S S+P
Sbjct: 209 ENIGHPSEAPKQP---LSATPSPAGSLQDEDMDDFKKSVLVDSPLSLSSSSGLPNISSHP 265
Query: 498 TPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKP 557
P S + A G K S + ++K RKKKD N P+KP
Sbjct: 266 APPSSISPATARRGGGKPATLASANVVAGAKK---------------GRKKKDPNEPQKP 310
Query: 558 MSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEA 617
+SAY ++F D + IK NP SF E++K +W +++ ++K Y K AK++Y +A
Sbjct: 311 VSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLAEEQKQVYKRKTEAAKKEYLKA 370
Query: 618 LKAYK 622
L AY+
Sbjct: 371 LAAYR 375
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEKA++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|449683907|ref|XP_002160081.2| PREDICTED: uncharacterized protein LOC100198143, partial [Hydra
magnipapillata]
Length = 760
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 25/178 (14%)
Query: 467 EDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDS----------DASEGTKKKK 516
E+D +ES + ++N ++DV E +S + TD DEDS D +E + KKK
Sbjct: 391 ENDLTYEESLETEWN---KKNDVKELTNSRTSSTD-DEDSLPLSKLKFEEDLTEISSKKK 446
Query: 517 KEKS----RKTITISEKPRKSKKDKESSGGSTKRKKK-------DKNAPKKPMSAYMMWF 565
K+ + +S+ K +K+ ++ K++K D AP KP+ AY ++F
Sbjct: 447 GRKAGSKNSDLLPLSQVAAKLRKEDDTKLKGKKKEKTKAKKMKKDSRAPVKPILAYQLFF 506
Query: 566 NDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE 623
+++ IKKD+P + F E++K +LW+ +S +K Y +K NK K +Y+E LK YKE
Sbjct: 507 REVQTGIKKDHPELGFGEVSKMVAQLWEALSEDKKNVYHDKYNKDKNEYSEKLKQYKE 564
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK D+PG+S + AKK GE+W S+K+K Y++K K
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 188
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 189 LKEKYEKDIAAYR 201
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F E ++K E WKT+SSKEK +++E K Y+
Sbjct: 51 MSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYD 110
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y G + + K+P S H+ K K + S D
Sbjct: 111 REMKNYVPPKGEKKGKKKDPNAPKRPP---SAFFLFCSEHRPKIKN---DHPGLSIGDTA 164
Query: 676 KKAS------SKRKRDSDEDSKAKTKKKKEK------SESESDSGESEKEKKSKSKPKGD 723
KK S + + E AK K+K EK ++S+SD+G KK +P G
Sbjct: 165 KKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAG-----KKGPGRPAGS 219
Query: 724 KSKS 727
K K+
Sbjct: 220 KKKA 223
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+ +SAYM + N+ R+ ++++NPGISF ++ K GE WK ++ K++A Y+ K
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAA 80
Query: 610 AKEDYNEALKAYKESGGGQD 629
K+ Y + +AY G D
Sbjct: 81 DKKRYEDEKQAYNAQADGDD 100
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 537 KESSGGSTK--RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKT 594
K + G T+ RKKKDKNAPK+ +SA+M + ND+RE +KK+ P ++F +I+ + G WK
Sbjct: 6 KRADGDHTRKPRKKKDKNAPKRALSAFMFFSNDIRETVKKEMPELAFLQISSEIGRRWKK 65
Query: 595 VSSKEKAEYDEKVNKAKEDYNE 616
+S +E+ YDE K Y E
Sbjct: 66 ISDEERRPYDELAAADKRRYQE 87
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+ SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDLNAPKRTPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAVKLKEKYEKDIAAYRAKG 166
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + +E+ KK +P ++F+E +K E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKTISAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
V K Y +K Y
Sbjct: 63 MVKADKARYEREMKTY 78
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+ +IAKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLPIGDIAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 153 EKYGKDIAAYRTKG 166
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D + P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S KEK+++++
Sbjct: 3 KGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKFED 62
Query: 606 KVNKAKEDYNEALK 619
K Y+ +K
Sbjct: 63 MAKSDKARYDREMK 76
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 207 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 266
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 267 EKYEKDIAAYRAKG 280
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 527 SEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEI 584
S K RK SG R + D N P+ MS+Y + RE+ KK +P ++F E
Sbjct: 96 SRKRRKLPPPGPGSGSFQCRSRGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEF 155
Query: 585 AKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
+KK E WKT+S+KEK+++++ K Y+ +K Y
Sbjct: 156 SKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNY 192
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P + ++F++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 99
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKK 644
KE Y + + YK G DG +K P KK
Sbjct: 100 LKEKYEKDVADYKSKG----KFDGAKGPAKVPRKK 130
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 530 PRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGG 589
P++ ++S ++KKKD NAPK+ +SAYM + N+ R+ ++++NPGISF ++ K G
Sbjct: 2 PKEKVSSRKSKTRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLG 61
Query: 590 ELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
E WK ++ K++A Y+ K K+ Y + +Y
Sbjct: 62 ERWKALNEKQRAPYEAKAAADKKRYEDEKASY 93
>gi|390462616|ref|XP_003732880.1| PREDICTED: TOX high mobility group box family member 2 [Callithrix
jacchus]
Length = 506
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKP 641
AK++Y +AL AY+ S + S D +KS +P
Sbjct: 302 AKKEYLKALAAYRASLVSKSSPDQSETKSSQP 333
>gi|340724328|ref|XP_003400534.1| PREDICTED: high mobility group protein 20A-like [Bombus terrestris]
Length = 329
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 501 DSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSA 560
D DS G KK + + TI+ R K+ K+ +D APK+P++
Sbjct: 39 DKTPDSICDNGVKKNNTASAVASNTINTTNRAKKR---------KKVPRDATAPKQPLTG 89
Query: 561 YMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKA 620
Y + ND REK++ +NP +SF EI K W T+ + +K +Y + + KE YN
Sbjct: 90 YFRFLNDRREKVRTENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSD 149
Query: 621 YKES 624
YK++
Sbjct: 150 YKQT 153
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+ +SAYM + N+ RE ++++NPGISF ++ K GE WK +S K++A Y+EK K
Sbjct: 23 NAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAADK 82
Query: 612 EDYNEALKAYKES 624
+ Y + +Y ++
Sbjct: 83 KRYEDEKASYNQA 95
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%)
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
S G TK+K KD NAPK P SA+ ++ ++ R KIK ++PG+S ++ KK GE+W ++
Sbjct: 80 SPKGETKKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHPGLSIGDVVKKLGEMWTNTAAD 139
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESG 625
+K Y++ K KE Y + + AY+ G
Sbjct: 140 DKQPYEKMAAKLKEKYEKDIAAYRAKG 166
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 145
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
KE Y + + YK S G DS G S+K
Sbjct: 146 LKEKYEKDVADYK-SKGKFDSVKGTAKASRK 175
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 554 PKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
PKKP MSAY + RE+ KK NP ++F E +KK E WK +S KEK+++DE
Sbjct: 3 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMAK 62
Query: 609 KAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 ADKLRYDREMKDY 75
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK D+PG+S + AKK GE+W S+K+K Y++K K
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 150
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 151 LKEKYEKDIAAYR 163
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + + KK +P ++F E ++K E WKT+SSKEK +++E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK D+PG+S + AKK GE+W S+K+K Y++K K
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 150
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 151 LKEKYEKDIAAYR 163
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E ++K E WKT+SSKEK +++E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 200
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 201 LKEKYEKDVADYKSKG 216
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 65 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 124
Query: 616 EALKAY 621
+K Y
Sbjct: 125 REMKDY 130
>gi|260820323|ref|XP_002605484.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
gi|229290818|gb|EEN61494.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
Length = 375
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
R KD NAPK P++ Y+ + N+ REK+++DNP + F EI + G W ++ EK +Y +
Sbjct: 117 RVTKDVNAPKAPLTGYVRFLNERREKMRQDNPNVPFPEITRMLGNEWSKLAPHEKQQYLD 176
Query: 606 KVNKAKEDYNEALKAYKES 624
+ K KE Y + L+ Y+++
Sbjct: 177 EAEKDKERYMKELEEYQQT 195
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 51/71 (71%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAP++P SA+ ++ +D R +I+ +NPGIS ++AKK GELW +++K+K Y+E+ + K
Sbjct: 92 NAPRRPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLK 151
Query: 612 EDYNEALKAYK 622
E Y + + AY+
Sbjct: 152 EKYEKEVAAYR 162
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 542 GSTK-RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
G TK ++KKD NAPK+P SA+ ++ ++ R +IK + PG+S + AKK GELW + K+K
Sbjct: 83 GETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLSIGDTAKKLGELWAEQTPKDK 142
Query: 601 AEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
+++K K KE Y + + AY+ G SD GK + KK+ V PH
Sbjct: 143 LPHEQKAAKLKEKYEKDVAAYRAKG---KSDVGKKVPGRATGSKKK-----VEPH 189
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F++ +KK E WK++S+KEK ++++
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 LAKGDKARYEREMKTY 78
>gi|27450225|gb|AAO14565.1|AF462604_2 HMG-L6 [Mus musculus]
Length = 199
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
TK+K KD+NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K Y
Sbjct: 94 TKKKFKDRNAPKRPSSAFFLFCSEYRPKIKGESPGLSIGDVAKKLGEMWNNTAADDKQLY 153
Query: 604 DEKVNKAKEDYNEALKAYKESG 625
EK K KE Y + + AY+ G
Sbjct: 154 -EKAAKLKEKYKKDIAAYRAKG 174
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P A+ ++ ++ R KI+ ++PG+S + AKK GELW ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPLAFFLFCSEYRPKIEGEHPGLSIGDTAKKLGELWNNTAANDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y+++ K KE Y + + AY+ G
Sbjct: 143 PYEKEAAKLKEKYEKDIAAYRAKG 166
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + E+ KK +P ++F+E +KK E WK +S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKVDKTRYEREMKTY 78
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 517 KEKSR-KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
KEKS+ + ++K R ++ K+ +KKKD NAPK+P S + ++ ++ R KIK
Sbjct: 55 KEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKST 114
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
NPGIS ++AKK GE+W +S EK Y+ K K KE Y + + YK G
Sbjct: 115 NPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|390462613|ref|XP_002747616.2| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Callithrix jacchus]
gi|390462614|ref|XP_002747615.2| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Callithrix jacchus]
Length = 464
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKP 641
AK++Y +AL AY+ S + S D +KS +P
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQSETKSSQP 291
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+P S + ++ +D R KIK +PG++ ++AKK GELW + +EK Y+
Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNA 144
Query: 606 KVNKAKEDYNEALKAYKESG 625
K K KE Y + + Y+ G
Sbjct: 145 KAAKLKEKYEKDVADYRTKG 164
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K+D P+ MS+Y + RE+ KK NP ++F++ +K+ E WKT+S KEK+++++
Sbjct: 3 KRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDD 632
K Y+ +K Y G + D
Sbjct: 63 LAKVDKVRYDREMKTYIPPKGSKKKKD 89
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 147 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 206
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 207 EKYEKDIAAYRAKG 220
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 128 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSQQSAKDKQPYEQKAAKLK 187
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 188 EKYEKDIAAYRAKGKSEAGKKG 209
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 540 SGG--STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTV 595
SGG S K D N P+ MS+Y + RE+ K+ +P + F E +KK E WKT+
Sbjct: 28 SGGRRSVTMGKGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTM 87
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAY 621
S+KEK++++ K Y+ +K Y
Sbjct: 88 SAKEKSKFEGMAKSGKVRYDREMKNY 113
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 543 STKRKKK--DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
+TKR KK D + PKKP+S YM + N+ RE++KK+NP + TEI+K GE WK +S +EK
Sbjct: 13 NTKRGKKEVDPDKPKKPLSGYMRYCNEQREQVKKENPELKLTEISKVLGEKWKELSEEEK 72
Query: 601 AEYDEKVNKAKEDYNEALKAYKESG--GGQDSDDGK 634
Y + KE Y+ ++ YK++ G +++D K
Sbjct: 73 KPYQDAYEADKEKYDLQMEEYKKTHPTGKKNADPNK 108
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
T +K D N PK+P+S+Y+++ ND RE++K+ NP +S EI G++WK + +EK
Sbjct: 99 TGKKNADPNKPKRPLSSYIIFSNDKREEVKRKNPDMSNKEITTLLGKMWKELPEEEKQ-- 156
Query: 604 DEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKS-KEF 662
+ ++ + E KAY+E G + + K K P K+KET ST KV S +E
Sbjct: 157 -----EYEKQHAEEKKAYEEKMGEYRREHPEL-KEKTPKKQKETKSTM---KKVSSEEEA 207
Query: 663 IESNGSSSDS 672
++SN S++
Sbjct: 208 VDSNEEESEN 217
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P+S + ++ ++ R KIK NPGIS ++AKK G++W +S EK Y K K
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWNNLSDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAK 643
KE Y + + YK GK+ +K PAK
Sbjct: 149 LKEKYEKDVANYKS--------KGKSDGAKGPAK 174
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 558 MSAYMMWFNDMREKIKKDN---PGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
MSAY + RE+ KK N P ++F E +KK E WKT+S KEK+++DE K Y
Sbjct: 13 MSAYAFFVQTCREEHKKKNLEVP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY 71
Query: 615 NEALKAY 621
+ K Y
Sbjct: 72 DRETKDY 78
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+K+KD NAPK+P+SAYM + D R ++K+DNP SF E+ K G WK + EK +Y++
Sbjct: 39 KKEKDPNAPKRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKKQYND 98
Query: 606 KVNKAKEDYNEALKAY 621
+ KE Y A AY
Sbjct: 99 MATRDKERYTNAKAAY 114
>gi|403290701|ref|XP_003936446.1| PREDICTED: TOX high mobility group box family member 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKP 641
AK++Y +AL AY+ S + S D +KS +P
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQSETKSSQP 291
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 73 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 124
Query: 676 KKASSKRKRDSDEDSKA---KTKKKKEKSE 702
KK SD + + K K KEK E
Sbjct: 125 KKLGEMWNNLSDNEKQPYNNKAAKLKEKYE 154
>gi|159478607|ref|XP_001697394.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274552|gb|EDP00334.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 255
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 491 EEYDSNPTPTDSDEDSDASEGTKKKKKE---KSRKTITISEKPRKSKKDKESSGGSTKRK 547
+EY S T SD +S+A + KK K K+ +++ RK + + G +RK
Sbjct: 62 QEYAS----TKSDSESEARSPSGKKHKGGHVKASAAQAYAQEWRKEPAVESARLGGNERK 117
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKV 607
APKKPM+ ++ + N +RE +K +NPGI+F E+AK GE W +S++EKAEY ++
Sbjct: 118 AS--GAPKKPMTPFLHFSNAVRESVKAENPGIAFGELAKVIGEKWAKLSAQEKAEYVKRF 175
Query: 608 NKAKEDYNEALKAY 621
++ K+ Y ++ Y
Sbjct: 176 DEDKQRYAREMQDY 189
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 558 MSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEA 617
M+A++++ N MR +K ++PGI F E++K GE W + +KEKAEY+ K + K+ Y
Sbjct: 1 MTAFLLFSNAMRAAVKAESPGIDFGEVSKILGEKWARICAKEKAEYEAKAAEDKDRYLRE 60
Query: 618 LKAY 621
++ Y
Sbjct: 61 MQEY 64
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
N PK+ +SAYM + N+ R+K++ +NPGI F E+ K GE WK + K+KA Y+ K K
Sbjct: 28 NMPKRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAADK 87
Query: 612 EDYNEALKAYKESGGGQDSDD 632
+ Y E AY + GG D +D
Sbjct: 88 KRYEEEKAAY--TAGGDDDED 106
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 73 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 124
Query: 676 KKASSKRKRDSDEDSKA---KTKKKKEKSE 702
KK SD + + K K KEK E
Sbjct: 125 KKLGEMWNNLSDSEKQPYNNKAAKLKEKYE 154
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 73 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 124
Query: 676 KKASSKRKRDSDEDSKA---KTKKKKEKSE 702
KK SD + + K K KEK E
Sbjct: 125 KKLGEMWNNLSDSEKQPYNNKAAKLKEKYE 154
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 542 GSTK-RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEK 600
G TK ++KKD NAPK+P SA+ ++ ++ R +IK + PG+S + AKK GELW + K+K
Sbjct: 83 GETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLSIGDTAKKLGELWAEQTPKDK 142
Query: 601 AEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGK 634
+++K K KE Y + + AY+ G SD GK
Sbjct: 143 LPHEQKAAKLKEKYEKDVAAYRAKG---KSDVGK 173
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F+E +KK E WK++S+KEK ++++
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 LAKGDKARYEREMKTY 78
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 73 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 124
Query: 676 KKASSKRKRDSDEDSKA---KTKKKKEKSE 702
KK SD + + K K KEK E
Sbjct: 125 KKLGEMWNNLSDSEKQPYNNKAAKLKEKYE 154
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESG 625
E+Y + + AY+ G
Sbjct: 153 EEYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ K +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+KKKD NAPK+P S + ++ +D R KIK +PG++ ++AKK GELW + +EK Y+
Sbjct: 92 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNA 151
Query: 606 KVNKAKEDYNEALKAYKESG 625
K K KE Y + + Y+ G
Sbjct: 152 KAAKLKEKYEKDVADYRTEG 171
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKA 601
TK K+D P+ MS+Y + RE+ KK NP ++F++ +K+ E WKT+S KEK+
Sbjct: 6 TKMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKS 65
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDD 632
++++ K Y+ +K Y G + D
Sbjct: 66 KFEDLAKVDKVRYDREMKTYIPPKGSKKKKD 96
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 167 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 226
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 227 EKYEKDIAAYRAKGKSEAGKKG 248
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 565 FNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
N RE+ KK +P ++F E +KK E WKT+S+KEK+++++ K Y+ +K Y
Sbjct: 94 INTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNY 152
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNPGI--SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP I +F E +KK E WKT+SSKEKA++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N PKKP +AYM++ N+ R +IK+ P + TE+AKK GE WK + ++K Y +K +K
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMKVTEVAKKAGENWKAMGEEDKKPYQDKADK 155
Query: 610 AKEDYNEALKAYKESGGG 627
AKE + +K Y+E G
Sbjct: 156 AKETWKTEMKKYEEKKDG 173
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEKA++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 147
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 148 LKEKYEKDVADYKSKG 163
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEKA++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 71
Query: 616 EALKAY 621
+K Y
Sbjct: 72 REMKDY 77
>gi|431914121|gb|ELK15380.1| TOX high mobility group box family member 3 [Pteropus alecto]
Length = 570
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E ++ I EK R + + K+KKKD N P
Sbjct: 302 ATPSPSSSINEEDADEASR-----------AIGEK-RAAPDSGKKPKTPKKKKKKDPNEP 349
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 350 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 409
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 410 LKALAAYRAS 419
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y+ K K
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 150
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 151 LKEKYEKDVADYKSKG 166
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 15 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 74
Query: 616 EALKAY 621
+K Y
Sbjct: 75 REMKDY 80
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPG-ISFTEIAKKGGELWKTVSSKEKAE 602
TK+ KD N PK+P SA+ ++ +D RE+ KKD+P S + K GE WK++S ++KA
Sbjct: 27 TKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAVGKACGEAWKSMSEEDKAP 86
Query: 603 YDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y + K KE+Y A +AY + G+D +DG
Sbjct: 87 YAARALKKKEEYEVATQAYNKKLEGKDEEDG 117
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAK 189
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 190 LKEKYEKDVADYKSKG 205
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 54 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 113
Query: 616 EALKAY 621
+K Y
Sbjct: 114 REMKDY 119
>gi|357604632|gb|EHJ64272.1| putative high mobility group protein [Danaus plexippus]
Length = 818
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
+D N P+KP+SAY ++F D + IK NP SF E++K +W + S+ K+ Y +K
Sbjct: 411 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 470
Query: 609 KAKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 471 VAKKEYLKALAAYRAS 486
>gi|403292578|ref|XP_003937316.1| PREDICTED: TOX high mobility group box family member 3 [Saimiri
boliviensis boliviensis]
Length = 551
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E ++ I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEASRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 544 TKRK-----KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
TKRK K D+NAP++P SAY+++ N MRE +K N +SFTE+AK GE W+ ++ +
Sbjct: 104 TKRKYRRHPKPDENAPERPPSAYVLFANKMREDLKGRN--LSFTEMAKLVGENWQNLTPE 161
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKES 624
EK Y+ + + K+ Y L YK++
Sbjct: 162 EKEPYETQAQRCKDKYLAELAEYKKT 187
>gi|42733470|dbj|BAD11332.1| BRI1-KD interacting protein 104 [Oryza sativa Japonica Group]
Length = 223
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 27/238 (11%)
Query: 406 SIEKEEYGKLFDFIREKKLRVKNTGKGEKPNYKEDFGSSD-DEKEPDAYLARVKREAAER 464
+I++ EY LF+FI K L++ N G G+ D D+ D +L R+K +A +
Sbjct: 1 NIQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDE 60
Query: 465 DDEDDEDEDESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTI 524
E + DEDF D+ +S +PT EDSDASE +K+K S+K
Sbjct: 61 -------ESDEEDEDFVADKDDS-------GSPTDDSGGEDSDASESGGEKEK-LSKKEA 105
Query: 525 TISEKPRKSK---KDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISF 581
+ S+ P K K +D+E S +KKKD NAPK+ M+ +M + R +K +NP +
Sbjct: 106 SSSKPPVKRKPKGRDEEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPT 165
Query: 582 TEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK-------ESG-GGQDSD 631
TEIAKK GE+W+ ++ +EK Y ++ K+ Y + Y+ +SG GG +SD
Sbjct: 166 TEIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 223
>gi|296231075|ref|XP_002760991.1| PREDICTED: TOX high mobility group box family member 3 [Callithrix
jacchus]
Length = 552
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E ++ I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEASRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 99
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 100 LKEKYEKDIAAYR 112
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ + R KIK ++PG+S + AKK GELW S+K+K Y++KV K K
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGLSIGDTAKKLGELWSEQSAKDKLPYEQKVAKLK 152
Query: 612 EDYNEALKAYK 622
E Y + + AY+
Sbjct: 153 EKYEKDIAAYR 163
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKGDKARYDREMKNY 78
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ + R KIK ++PG+S + AKK GELW S+K+K Y++KV K K
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGLSIGDTAKKLGELWSEQSAKDKLPYEQKVAKLK 152
Query: 612 EDYNEALKAYK 622
E Y + + AY+
Sbjct: 153 EKYEKDIAAYR 163
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKGDKARYDREMKNY 78
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 222
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 223 LKEKYEKDVADYKSKG 238
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 87 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 146
Query: 616 EALKAY 621
+K Y
Sbjct: 147 REMKDY 152
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 44 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 103
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 104 PYEKKAAKLKEKYEKDIAAYRAKG 127
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 81 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 140
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 141 EKYEKDIAAYRAKG 154
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++ K Y+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYD 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKNY 66
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 153
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 154 EKYEKDIAAYRAKGKSEAGKKG 175
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|26353080|dbj|BAC40170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK+ NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKRQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIES 665
K Y+ +K Y G + + K+P + P K+KS+ S
Sbjct: 63 MAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP-KIKSEHPGLS 121
Query: 666 NGSSSDSDDDKKASSKRKRDSDEDSKA---KTKKKKEKSESESDS----GESEKEKKSKS 718
G D KK S +D + K K KEK E + + G+SE KK
Sbjct: 122 IG-----DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPG 176
Query: 719 KPKGDKSKS 727
+P G K K+
Sbjct: 177 RPTGSKKKN 185
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 153
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 154 EKYEKDIAAYRAKGKSEAGKKG 175
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIES 665
K Y+ +K Y G + + K+P + P K+KS+ S
Sbjct: 63 MAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP-KIKSEHPGLS 121
Query: 666 NGSSSDSDDDKKASSKRKRDSDEDSKA---KTKKKKEKSESESDS----GESEKEKKSKS 718
G D KK S +D + K K KEK E + + G+SE KK
Sbjct: 122 IG-----DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPG 176
Query: 719 KPKGDKSKS 727
+P G K K+
Sbjct: 177 RPTGSKKKN 185
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKVRYDREMKNY 78
>gi|345325253|ref|XP_001508859.2| PREDICTED: TOX high mobility group box family member 2-like
[Ornithorhynchus anatinus]
Length = 586
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 191 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 250
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKP 641
AK++Y +AL AY+ S + S D +KS +P
Sbjct: 251 AKKEYLKALAAYRASLVSKSSADQGEAKSVQP 282
>gi|334311690|ref|XP_001371950.2| PREDICTED: TOX high mobility group box family member 3 [Monodelphis
domestica]
Length = 572
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 208 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 255
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 256 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 315
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 316 LKALAAYRAS 325
>gi|380797143|gb|AFE70447.1| TOX high mobility group box family member 2 isoform a, partial
[Macaca mulatta]
Length = 513
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 308
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 309 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 345
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 517 KEKSR-KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
KEKS+ I ++K R ++ K+ +KKKD NAPK+P S + ++ ++ R KIK
Sbjct: 55 KEKSKFDEIAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSA 114
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
NPGIS ++AKK GE+W +S EK Y K K KE Y + + YK G
Sbjct: 115 NPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYKSKG 164
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+ +SAYM + N+ REK+++DNPGI F E+ K GE WK ++ K++ Y+ K K
Sbjct: 26 NAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAADK 85
Query: 612 EDYNEALKAYK 622
+ Y E AY+
Sbjct: 86 KRYEEEKAAYQ 96
>gi|403367152|gb|EJY83386.1| High mobility group protein [Oxytricha trifallax]
Length = 331
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
+K+KDKNAPKKP+SA+M++ N R ++KK+NP ++ E +K GE W +S +K + E
Sbjct: 112 KKQKDKNAPKKPLSAFMLYNNFRRPQVKKENPQLTLPETSKVIGEEWNKLSESQKKIWQE 171
Query: 606 KVNKAKEDY 614
+ KAK +Y
Sbjct: 172 RARKAKLNY 180
>gi|397511197|ref|XP_003825965.1| PREDICTED: TOX high mobility group box family member 2 isoform 6
[Pan paniscus]
gi|410055165|ref|XP_003953788.1| PREDICTED: TOX high mobility group box family member 2 [Pan
troglodytes]
Length = 384
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 120 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 179
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 180 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 216
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFT---------EIAKKGGELWKTV 595
K+K++D NAPK+P++A+ ++ REK+ + NPGI + +I++ G+ W+++
Sbjct: 24 KKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKWQSM 83
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGG 626
S +EK Y ++ N+AK YN+ +K Y E G
Sbjct: 84 SEQEKQPYVDQYNQAKSKYNDDVKEYNEKQG 114
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 101
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 102 EKYEKDIAAYRAKGKSEAGKKG 123
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 153 EKYEKDIAAYRAKG 166
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N + MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S +IAKK GELW ++ K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSMGDIAKKLGELWNNTAADGKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKNIAAYRAKG 166
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +K E KT+S+KEK ++++
Sbjct: 3 KGEPKKPRGKMSSYAFFVQTCREEPKKKHPDASVNFSEFSKTCSERGKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKVDKAGYEREMKTY 78
>gi|402882475|ref|XP_003904766.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Papio anubis]
gi|402882477|ref|XP_003904767.1| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Papio anubis]
gi|402882479|ref|XP_003904768.1| PREDICTED: TOX high mobility group box family member 2 isoform 3
[Papio anubis]
Length = 464
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 176
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 177 EKYEKDIAAYRAKGKSEAGKKG 198
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK ++++
Sbjct: 27 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFED 86
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESG 625
E Y + + AY+ G
Sbjct: 153 EKYEKDIAAYRAKG 166
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIES 665
K Y+ +K Y G + + K+P + P K+KS+ S
Sbjct: 63 MAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP-KIKSEHPGLS 121
Query: 666 NGSSSDSDDDKKASSKRKRDSDEDSKA---KTKKKKEKSESESDS----GESEKEKKSKS 718
G D KK S +D + K K KEK E + + G+SE KK
Sbjct: 122 IG-----DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKGPG 176
Query: 719 KPKGDKSKS 727
+P G K K+
Sbjct: 177 RPTGSKKKN 185
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKNDKARYDREMKNY 78
>gi|383847420|ref|XP_003699352.1| PREDICTED: uncharacterized protein LOC100875697 [Megachile
rotundata]
Length = 663
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 487 SDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKR 546
S+V E ++ T DSD DS G K S E K++ S K+
Sbjct: 259 SNVPEPNNNTTTSEDSD-DSTPHPGMITGNKRPS------PEPTDGGAKNQRKSKAQKKK 311
Query: 547 KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KK+D N P+KP+SAY ++F D + IK NP SF E++K +W + ++ K Y +K
Sbjct: 312 KKRDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDALDTEHKNVYKQK 371
Query: 607 VNKAKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 372 TEAAKKEYLQALAAYRAS 389
>gi|194386520|dbj|BAG61070.1| unnamed protein product [Homo sapiens]
Length = 384
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 120 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 179
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 180 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 216
>gi|355710193|gb|EHH31657.1| hypothetical protein EGK_12773 [Macaca mulatta]
Length = 541
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIES 665
K Y+ +K Y G + + K+P + P K+KS+ S
Sbjct: 63 MAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP-KIKSEHPGLS 121
Query: 666 NGSSSDSDDDKKA-SSKRKRDSDEDSKAKTKKKKEKS-ESESDSGESEKEKKSKSKPKGD 723
G ++ + + S + + E AK K+K EK + G+SE KK +P G
Sbjct: 122 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 181
Query: 724 KSKS 727
K K+
Sbjct: 182 KKKN 185
>gi|402908366|ref|XP_003916917.1| PREDICTED: TOX high mobility group box family member 3 [Papio
anubis]
Length = 556
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 168
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 169 LKEKYEKDVADYKSKG 184
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 92
Query: 616 EALKAY 621
+K Y
Sbjct: 93 REMKDY 98
>gi|355756773|gb|EHH60381.1| hypothetical protein EGM_11729 [Macaca fascicularis]
Length = 543
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|351694875|gb|EHA97793.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
Query: 503 DEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYM 562
+E S+A+EG++++ +++ R SK+ S G K+ +D NAPK P++ Y+
Sbjct: 63 NESSNAAEGSEQRHEDEQR-----------SKRGGWSKGRKRKKPLRDSNAPKSPLTGYV 111
Query: 563 MWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYK 622
+ N+ RE+++ P + F EI + G W + +EK Y ++ ++ KE Y + L+ Y+
Sbjct: 112 RFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
Query: 623 ESGGGQDSDDGKTSKSKKPAKKKETASTAVSPH 655
++ + + K + +++TA A H
Sbjct: 172 KTEAYKVFSRKTQDRQKGKSHRQDTARQATHDH 204
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426382171|ref|XP_004057690.1| PREDICTED: TOX high mobility group box family member 3 [Gorilla
gorilla gorilla]
Length = 576
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 208 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 255
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 256 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 315
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 316 LKALAAYRAS 325
>gi|114682080|ref|XP_514661.2| PREDICTED: TOX high mobility group box family member 2 isoform 5
[Pan troglodytes]
gi|114682082|ref|XP_001150443.1| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Pan troglodytes]
gi|397511187|ref|XP_003825960.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Pan paniscus]
gi|397511191|ref|XP_003825962.1| PREDICTED: TOX high mobility group box family member 2 isoform 3
[Pan paniscus]
gi|397511193|ref|XP_003825963.1| PREDICTED: TOX high mobility group box family member 2 isoform 4
[Pan paniscus]
gi|397511195|ref|XP_003825964.1| PREDICTED: TOX high mobility group box family member 2 isoform 5
[Pan paniscus]
gi|426391740|ref|XP_004062225.1| PREDICTED: TOX high mobility group box family member 2 isoform 3
[Gorilla gorilla gorilla]
gi|426391742|ref|XP_004062226.1| PREDICTED: TOX high mobility group box family member 2 isoform 4
[Gorilla gorilla gorilla]
Length = 464
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|109091989|ref|XP_001083789.1| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Macaca mulatta]
Length = 464
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|395839552|ref|XP_003792652.1| PREDICTED: TOX high mobility group box family member 3 [Otolemur
garnettii]
Length = 782
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E ++ I EK R + + K+KKKD N P
Sbjct: 421 ATPSPSSSINEEDADEASR-----------AIGEK-RAAPDSGKKPKTPKKKKKKDPNEP 468
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 469 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 528
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 529 LKALAAYRAS 538
>gi|410983521|ref|XP_003998087.1| PREDICTED: TOX high mobility group box family member 3 [Felis
catus]
Length = 561
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 206 ATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 253
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 254 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 313
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 314 LKALAAYRAS 323
>gi|444711256|gb|ELW52204.1| TOX high mobility group box family member 3 [Tupaia chinensis]
Length = 437
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|158260835|dbj|BAF82595.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|14249636|ref|NP_116272.1| TOX high mobility group box family member 2 isoform c [Homo
sapiens]
gi|149408141|ref|NP_001092266.1| TOX high mobility group box family member 2 isoform c [Homo
sapiens]
gi|119596350|gb|EAW75944.1| chromosome 20 open reading frame 100, isoform CRA_a [Homo sapiens]
gi|119596351|gb|EAW75945.1| chromosome 20 open reading frame 100, isoform CRA_a [Homo sapiens]
gi|167773955|gb|ABZ92412.1| TOX high mobility group box family member 2 [synthetic construct]
Length = 464
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|297707138|ref|XP_002830373.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Pongo abelii]
gi|395752345|ref|XP_003779405.1| PREDICTED: TOX high mobility group box family member 2 [Pongo
abelii]
Length = 464
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|350585032|ref|XP_003127034.3| PREDICTED: TOX high mobility group box family member 3 [Sus scrofa]
Length = 578
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 215 ATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 262
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 263 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 322
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 323 LKALAAYRAS 332
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 101
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 102 EKYEKDIAAYRAKGKSEAGKKG 123
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
R KKD NAPK+ +SAYM + R +I NP T++AK GE WKT++ +EK+ Y +
Sbjct: 515 RAKKDPNAPKRGLSAYMFFSAAKRAEITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQ 574
Query: 606 KVNKAKEDYNEALKAYKESGGGQ 628
+ ++ K Y ++AY+ +GG Q
Sbjct: 575 QADEDKIRYEREMEAYR-AGGSQ 596
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 185 LKEKYEKDVADYKSKG 200
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 616 EALKAY 621
+K Y
Sbjct: 109 REMKDY 114
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
KE Y + + YK S G D G T ++K
Sbjct: 149 LKEKYEKDVADYK-SKGKFDGAKGPTKVARK 178
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WK +S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 163
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 164 LKEKYEKDVADYKSKG 179
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 87
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 88 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 139
Query: 676 KKASSKRKRDSDEDSK---AKTKKKKEKSE 702
KK SD + + K K KEK E
Sbjct: 140 KKLGEMWNNLSDSEKQPYITKAAKLKEKYE 169
>gi|332209088|ref|XP_003253642.1| PREDICTED: TOX high mobility group box family member 2 isoform 4
[Nomascus leucogenys]
Length = 404
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 140 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 199
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 200 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 236
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
N PKKP SAY ++ N+ R IK+++P I FTEI+K E WK + +EK EY K + A+
Sbjct: 24 NRPKKPQSAYFLYLNEHRASIKEEHPDIKFTEISKVASEQWKALGEEEKKEYQAKADAAR 83
Query: 612 EDYNEALKAY 621
E Y + ++ Y
Sbjct: 84 EQYKKDMEKY 93
>gi|395505933|ref|XP_003757291.1| PREDICTED: TOX high mobility group box family member 3-like
[Sarcophilus harrisii]
Length = 572
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 208 ATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 255
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 256 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 315
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 316 LKALAAYRAS 325
>gi|351707340|gb|EHB10259.1| TOX high mobility group box family member 3 [Heterocephalus glaber]
Length = 437
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|345319487|ref|XP_001520125.2| PREDICTED: TOX high mobility group box family member 3-like
[Ornithorhynchus anatinus]
Length = 780
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 416 ATPSPSSSINEEDADESNR-----------AIGEK-RAAPDSGKKPKTPKKKKKKDPNEP 463
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 464 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 523
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 524 LKALAAYRAS 533
>gi|154323224|ref|XP_001560926.1| hypothetical protein BC1G_00011 [Botryotinia fuckeliana B05.10]
Length = 263
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 474 ESTDEDFNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKS 533
E D DF P SD + Y + +PT + D+ E K +R S P +
Sbjct: 62 ERDDCDFEP----SDTSSSYRALASPTSTTPDNHGDE-----PKAGARDAKEGSSGPHGA 112
Query: 534 KKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWK 593
K+ + K D++AP++P SAY+++ N MRE +K +SFTEIAK GE W+
Sbjct: 113 KRKYR------RHPKPDESAPERPPSAYVIFSNKMREDLK--GRALSFTEIAKLVGENWQ 164
Query: 594 TVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
+S EK Y+ + AKE YN L YK++
Sbjct: 165 NLSPSEKEPYEHQAYTAKERYNNELAEYKKT 195
>gi|328713688|ref|XP_001948292.2| PREDICTED: hypothetical protein LOC100164788 [Acyrthosiphon pisum]
Length = 381
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
+D N P+KP+SAY ++F D + IK NP SF E++K +W ++ + K Y +K
Sbjct: 170 RDPNEPQKPVSAYALFFRDTQAAIKGKNPNASFGEVSKIVASMWDSLDADHKNVYKKKTE 229
Query: 609 KAKEDYNEALKAYKES----GGGQDSD 631
AK+DY +AL AY+ S GG DS+
Sbjct: 230 AAKKDYLKALAAYRASLVSKGGEPDSN 256
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 185 LKEKYEKDVADYKSKG 200
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 616 EALKAY 621
+K Y
Sbjct: 109 REMKDY 114
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSTGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYQKDIAAYRAKGKSEAGKKG 174
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKVCYDREMKNY 78
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG--KTSKSKK 640
Y++K K KE Y + + AY+ G + G K KSKK
Sbjct: 143 PYEKKAAKLKEKYEKEIAAYRAEGKPDTAKKGVVKAEKSKK 183
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 219
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 220 LKEKYEKDVADYKSKG 235
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 84 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 143
Query: 616 EALKAY 621
+K Y
Sbjct: 144 REMKDY 149
>gi|297707142|ref|XP_002830375.1| PREDICTED: TOX high mobility group box family member 2 isoform 3
[Pongo abelii]
Length = 404
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 140 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 199
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 200 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 236
>gi|440899708|gb|ELR50974.1| TOX high mobility group box family member 2 [Bos grunniens mutus]
Length = 515
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 310
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 311 AKKEYLKALAAYRASLVSKSSPDQGETKSAQANPPAK 347
>gi|395747831|ref|XP_002826470.2| PREDICTED: TOX high mobility group box family member 3 [Pongo
abelii]
Length = 554
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 172 ATPSPSSSINEEDADEANRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 219
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 220 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 279
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 280 LKALAAYRAS 289
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WK S KEK+++DE K Y+
Sbjct: 13 MSAYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|374862298|gb|AFA25746.1| TOX2 variant 5 [Homo sapiens]
Length = 350
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
>gi|194208591|ref|XP_001492381.2| PREDICTED: TOX high mobility group box family member 3 [Equus
caballus]
Length = 559
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 192 ATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 239
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 240 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 299
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 300 LKALAAYRAS 309
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK D PG+S + AKK GELW + K+K +++K K
Sbjct: 92 DPNAPKRPPSAFFLFCSENRPQIKNDTPGLSIGDTAKKLGELWSEQTPKDKQPFEQKAAK 151
Query: 610 AKEDYNEALKAYKESGGGQDSDDGK 634
KE Y + + AY+ G SD GK
Sbjct: 152 LKEKYEKDVAAYRAKG---SSDVGK 173
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P +SF E +KK E WKT+S+K K ++++
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 LAKGDKVRYEREMKTY 78
>gi|338719291|ref|XP_003363977.1| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Equus caballus]
Length = 464
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDDG---KTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDPGETKSTQASPPAK 296
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|334314632|ref|XP_001379535.2| PREDICTED: TOX high mobility group box family member 4-like
[Monodelphis domestica]
Length = 731
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 493 YDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKN 552
+ P+PT S + D + ++ S+KTI + + + K+KKKD N
Sbjct: 277 LSTTPSPTSSLHEDDV----EDFRRLPSQKTIVV--------ESSKKQKTPKKKKKKDPN 324
Query: 553 APKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKE 612
P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK+
Sbjct: 325 EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKK 384
Query: 613 DYNEALKAYK 622
+Y +AL AYK
Sbjct: 385 EYLKALAAYK 394
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 154
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 155 LKEKYEKDVADYKSKG 170
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 19 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 78
Query: 616 EALKAY 621
+K Y
Sbjct: 79 REMKDY 84
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK ++PG+S + AKK GE+W + K+K Y++K K
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESPGLSIGDTAKKLGEMWSEQTPKDKLPYEQKAAK 151
Query: 610 AKEDYNEALKAYKESGGGQDSDDGK 634
KE Y + + AYK G SD GK
Sbjct: 152 LKEKYEKDVAAYKAKG---KSDVGK 173
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK++++E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKNDKVRYEREMKTY 78
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNPGI--SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP I +F E +KK E WKT+S+KEK+++D+ K Y+
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYD 72
Query: 616 EALKAY 621
+K +
Sbjct: 73 REMKDF 78
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|344279989|ref|XP_003411768.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Loxodonta africana]
Length = 507
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 302 AKKEYLKALAAYRASLVSKSSPDQCETKSTQANPPAK 338
>gi|426391738|ref|XP_004062224.1| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Gorilla gorilla gorilla]
gi|410306176|gb|JAA31688.1| TOX high mobility group box family member 2 [Pan troglodytes]
Length = 506
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 302 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338
>gi|444726240|gb|ELW66779.1| TOX high mobility group box family member 2 [Tupaia chinensis]
Length = 506
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 106 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 165
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K + S PAK
Sbjct: 166 AKKEYLKALAAYRASLVSKSSPDQGESKGTPSNPPAK 202
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|149408144|ref|NP_001092267.1| TOX high mobility group box family member 2 isoform a [Homo
sapiens]
gi|119596352|gb|EAW75946.1| chromosome 20 open reading frame 100, isoform CRA_b [Homo sapiens]
gi|307686495|dbj|BAJ21178.1| TOX high mobility group box family member 2 [synthetic construct]
Length = 506
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 302 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y+ K K
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNKAAK 123
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 124 LKEKYEKDVADYKSKG 139
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK ++PG+S + AKK GE+W S+K+K Y++K K
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 174
Query: 610 AKEDYNEALKAYKESGGGQDSDDG 633
KE Y + + AY + G + G
Sbjct: 175 LKEKYEKDIAAYCDKGKSEAGKKG 198
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P I+F E +KK E WKT+S+KEK++++
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+ +SAYM + N+ R+K+++DNPGI F E+ K GE WK ++ K++ Y+ K K
Sbjct: 26 NAPKRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAADK 85
Query: 612 EDYNEALKAYK 622
+ Y E AY+
Sbjct: 86 KRYEEEKAAYQ 96
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEHSVKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKS 66
Query: 610 AKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 67 DKARYDREMKNY 78
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 127 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 186
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 187 EKYEKDIAAYRAKGKSEAGKKG 208
>gi|426243524|ref|XP_004015604.1| PREDICTED: TOX high mobility group box family member 3 [Ovis aries]
Length = 541
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 203 ATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 250
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 251 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 310
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 311 LKALAAYRAS 320
>gi|331999959|ref|NP_001193617.1| TOX high mobility group box family member 2 isoform 1 [Bos taurus]
Length = 516
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 302 AKKEYLKALAAYRASLVSKSSPDQGETKSAQANPPAK 338
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGI+ ++AKK GE+W +S EK Y+ K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNPGI--SFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP I +F+E +KK E W+ +S KEK+++D+ K Y+
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCSERWRGMSGKEKSKFDDLAKADKVRYD 72
Query: 616 EALKAY 621
++ +
Sbjct: 73 REMQDF 78
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R KIK D+PG+S + AKK GE+W +K+K Y++K K
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQLAKDKQPYEQKAAK 150
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 151 LKEKYEKDIAAYR 163
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E ++K E WKT+SSKEK +++E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+ +SAYM + N+ RE ++ +NPGI+F ++ K GE WK +++ ++ Y++K
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGIAFGQVGKVLGERWKALTTAQRKPYEDKAKA 80
Query: 610 AKEDYNEALKAYKESGGG 627
K+ Y + AY+ GGG
Sbjct: 81 DKQRYEDEKIAYQ--GGG 96
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ ++ R K+K++ PG+S ++AK+ GE+W +SS+EK
Sbjct: 82 GEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 142 PYEKKAAKLKEKYEKDIAAYRSKG 165
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ ++ R K+K++ PG+S ++AK+ GE+W +SS+EK
Sbjct: 82 GEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 142 PYEKKAAKLKEKYEKDIAAYRSKG 165
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|345793923|ref|XP_544407.3| PREDICTED: TOX high mobility group box family member 3 [Canis lupus
familiaris]
Length = 609
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 494 DSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNA 553
+ P+P+ S + DA E + I EK R + + K+KKKD N
Sbjct: 239 SATPSPSSSINEEDADESNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNE 286
Query: 554 PKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKED 613
P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++
Sbjct: 287 PQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKE 346
Query: 614 YNEALKAYKES 624
Y +AL AY+ S
Sbjct: 347 YLKALAAYRAS 357
>gi|297461758|ref|XP_885168.3| PREDICTED: TOX high mobility group box family member 3 isoform 2
[Bos taurus]
gi|297485262|ref|XP_002694823.1| PREDICTED: TOX high mobility group box family member 3 [Bos taurus]
gi|296478066|tpg|DAA20181.1| TPA: TOX high mobility group box family member 3-like [Bos taurus]
Length = 556
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 208 ATPSPSSSINEEDADETNRA-----------IGEK-RAAPDSGKKPKTPKKKKKKDPNEP 255
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 256 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 315
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 316 LKALAAYRAS 325
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
S G TK+K KD NAPK+P SA+ ++ ++ KIK + PG+S + AKK GE W + +++
Sbjct: 29 SPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERPGLSIGDAAKKLGETWNSTAAE 88
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESG 625
+K Y+ K K KE Y + + Y+ G
Sbjct: 89 DKQPYETKAAKLKEQYEKDIADYRAKG 115
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+SSKEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|440894115|gb|ELR46659.1| TOX high mobility group box family member 3, partial [Bos grunniens
mutus]
Length = 543
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 225 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 284
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 285 AKKEYLKALAAYRAS 299
>gi|334351203|sp|B7SBD2.1|TOX3_RAT RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|161702899|gb|ABX76291.1| TOX high mobility group box family member 3 [Rattus norvegicus]
Length = 577
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 250 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 309
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 310 AKKEYLKALAAYRAS 324
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y++K K KE Y + + AY+ G S G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKGKPDASKKG 174
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K +
Sbjct: 63 MAKADKAHYEREMKTF 78
>gi|395503000|ref|XP_003755861.1| PREDICTED: TOX high mobility group box family member 4 [Sarcophilus
harrisii]
Length = 626
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 218 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 277
Query: 610 AKEDYNEALKAYK 622
AK++Y +AL AYK
Sbjct: 278 AKKEYLKALAAYK 290
>gi|307205080|gb|EFN83551.1| High mobility group protein 20A [Harpegnathos saltator]
Length = 326
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 545 KRKK--KDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAE 602
KRKK +D APK+P++ Y + ND REK + ++P +SF +I K W T+ S +K +
Sbjct: 70 KRKKTPRDATAPKQPLTGYFRFLNDRREKARHEHPSLSFADITKLLAAEWSTLPSDQKQQ 129
Query: 603 YDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEF 662
Y + + KE YN + YK++ + + +T K + KKE T V+
Sbjct: 130 YLDAAEQDKERYNREISDYKQTEAYRLFTEKQTEKQNE--NKKERNGTGVN--------- 178
Query: 663 IESNGSSSDSDDD 675
E N D D+D
Sbjct: 179 TEQNDVQQDKDND 191
>gi|444706303|gb|ELW47646.1| Glycine/arginine-rich protein 1 [Tupaia chinensis]
Length = 485
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK K KD NAPK+P SA+ ++ ++ R KI K++PG+S +IAKK GELW T ++ +
Sbjct: 28 GETKEKFKDPNAPKRPPSAFFLFCSEYRPKI-KEHPGLSIGDIAKKLGELW-TSTAADGT 85
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
+ +K K +E + +A+ AY+ G
Sbjct: 86 QPRKKAAKLEEKHGKAIAAYRAEG 109
>gi|444525653|gb|ELV14121.1| TOX high mobility group box family member 4 [Tupaia chinensis]
Length = 600
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y++K K KE Y + + AY+ G + +G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKEG 174
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +++ E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
RKKKDKNAPK+ +SA+M + ND+R+ +KK+ P + F EI+ + G WK +S +++ YDE
Sbjct: 21 RKKKDKNAPKRALSAFMFFSNDIRDTVKKEMPDLQFLEISSEIGRRWKQISDEDRRPYDE 80
Query: 606 KVNKAKEDYNE 616
K Y E
Sbjct: 81 LAAADKRRYQE 91
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 HYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+SSKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y + +K Y
Sbjct: 63 MAKADKLRYEKEMKNY 78
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+SSKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y + +K Y
Sbjct: 63 MAKADKLRYEKEMKNY 78
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R K+K D PG+S + AKK GE+W + S++EK
Sbjct: 82 GHKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYPGLSIGDTAKKLGEMWNSSSAEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
Y++K K KE Y++ + AY+ + G DS+ T+
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYR-TKGKVDSESAATA 175
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F E +K+ E WKT+S KEK ++++
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+SSKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y + +K Y
Sbjct: 63 MAKADKLRYEKEMKNY 78
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+SSKEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y + +K Y
Sbjct: 63 MAKADKLRYEKEMKNY 78
>gi|417412008|gb|JAA52420.1| Putative hmg box-containing protein, partial [Desmodus rotundus]
Length = 625
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 225 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 284
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 285 AKKEYLKALAAYKD 298
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R K K ++PG+S ++AKK GE+W ++ +K
Sbjct: 296 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 355
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y++K K KE + + + AY+ G + +G
Sbjct: 356 PYEKKAAKLKEKHEKDIAAYRAKGKPDAAKNG 387
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|296480836|tpg|DAA22951.1| TPA: TOX high mobility group box family member 2 [Bos taurus]
Length = 498
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 224 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 283
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 284 AKKEYLKALAAYRASLVSKSSPDQGETKSAQANPPAK 320
>gi|291403500|ref|XP_002717936.1| PREDICTED: epidermal Langerhans cell protein LCP1 [Oryctolagus
cuniculus]
Length = 644
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 244 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 303
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 304 AKKEYLKALAAYKD 317
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%)
Query: 539 SSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSK 598
S G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++
Sbjct: 80 SPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 139
Query: 599 EKAEYDEKVNKAKEDYNEALKAYKESG 625
+K Y++K K KE Y + + AY+ G
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MSKADKARYEREMKTY 78
>gi|351705242|gb|EHB08161.1| TOX high mobility group box family member 4 [Heterocephalus glaber]
Length = 608
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|166706895|ref|NP_075923.2| TOX high mobility group box family member 4 [Mus musculus]
gi|342187130|sp|Q8BU11.3|TOX4_MOUSE RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|74150964|dbj|BAE27616.1| unnamed protein product [Mus musculus]
gi|74190752|dbj|BAE28170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|432090334|gb|ELK23762.1| TOX high mobility group box family member 4 [Myotis davidii]
Length = 654
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 256 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 315
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 316 AKKEYLKALAAYKD 329
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|390468842|ref|XP_002753818.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Callithrix jacchus]
Length = 595
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|74142195|dbj|BAE31864.1| unnamed protein product [Mus musculus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 90 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 149
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 150 PYEKKAAKLKEKYEKDIAAYRAKG 173
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 554 PKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 13 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 72
Query: 609 KAKEDYNEALKAY 621
K Y +K Y
Sbjct: 73 ADKARYEREMKTY 85
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 71 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 130
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 131 PYEKKAAKLKEKYEKDIAAYRAKG 154
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKTY 66
>gi|426232808|ref|XP_004010412.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Ovis aries]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|397466077|ref|XP_003804799.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Pan paniscus]
Length = 594
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|395861632|ref|XP_003803085.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Otolemur garnettii]
Length = 594
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 97 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 156
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 157 PYEKKAAKLKEKYEKDIAAYRAKG 180
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 548 KKDKNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAE 602
K K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK +
Sbjct: 14 KMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 73
Query: 603 YDEKVNKAKEDYNEALKAY 621
+++ K Y +K Y
Sbjct: 74 FEDMAKADKVRYEREMKTY 92
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 71 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 130
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 131 PYEKKAAKLKEKYEKDIAAYRAKG 154
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 60
Query: 616 EALKAY 621
+K Y
Sbjct: 61 REMKTY 66
>gi|397466073|ref|XP_003804797.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Pan paniscus]
Length = 620
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDITAYRAKG 166
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + E KK +P ++F+E +KKG E WKT+S++EK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKTISAEEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|326927243|ref|XP_003209802.1| PREDICTED: TOX high mobility group box family member 3-like
[Meleagris gallopavo]
Length = 573
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 308
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 309 AKKEYLKALAAYRAS 323
>gi|148674375|gb|EDL06322.1| mCG117361 [Mus musculus]
Length = 431
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 108 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 167
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S D + K +++ PAK
Sbjct: 168 AKKEYLKALAAYRASLVSKSPPDQGEAKNTQANPPAK 204
>gi|332841826|ref|XP_003314295.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Pan troglodytes]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|390468839|ref|XP_003734010.1| PREDICTED: TOX high mobility group box family member 4 [Callithrix
jacchus]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|115496600|ref|NP_001069175.1| TOX high mobility group box family member 4 [Bos taurus]
gi|122143247|sp|Q0P5K4.1|TOX4_BOVIN RecName: Full=TOX high mobility group box family member 4
gi|112362021|gb|AAI19930.1| TOX high mobility group box family member 4 [Bos taurus]
gi|296483369|tpg|DAA25484.1| TPA: epidermal Langerhans cell protein LCP1 [Bos taurus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|73977370|ref|XP_532626.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Canis lupus familiaris]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|50510609|dbj|BAD32290.1| mKIAA0737 protein [Mus musculus]
Length = 627
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 227 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 286
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 287 AKKEYLKALAAYKD 300
>gi|40788344|dbj|BAA34457.2| KIAA0737 protein [Homo sapiens]
Length = 629
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 227 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 286
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 287 AKKEYLKALAAYKD 300
>gi|410208198|gb|JAA01318.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410251418|gb|JAA13676.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410298720|gb|JAA27960.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410340637|gb|JAA39265.1| TOX high mobility group box family member 4 [Pan troglodytes]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|403264245|ref|XP_003924400.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 595
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|354491199|ref|XP_003507743.1| PREDICTED: TOX high mobility group box family member 4-like
[Cricetulus griseus]
gi|344252329|gb|EGW08433.1| TOX high mobility group box family member 4 [Cricetulus griseus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|301763962|ref|XP_002917396.1| PREDICTED: TOX high mobility group box family member 2-like
[Ailuropoda melanoleuca]
Length = 573
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 308 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 367
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S G + + K +++ PAK
Sbjct: 368 AKKEYLKALAAYRASLVSKGSPEQSETKGTQANPPAK 404
>gi|289063374|ref|NP_001165884.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|332223460|ref|XP_003260888.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Nomascus leucogenys]
gi|402875600|ref|XP_003901588.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Papio anubis]
gi|224493433|sp|Q5R6A9.2|TOX4_PONAB RecName: Full=TOX high mobility group box family member 4
gi|380784003|gb|AFE63877.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423311|gb|AFH34869.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423313|gb|AFH34870.1| TOX high mobility group box family member 4 [Macaca mulatta]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|338717126|ref|XP_003363590.1| PREDICTED: TOX high mobility group box family member 4-like isoform
2 [Equus caballus]
Length = 596
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|194038959|ref|XP_001929153.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Sus scrofa]
Length = 620
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|149692184|ref|XP_001505212.1| PREDICTED: TOX high mobility group box family member 4-like isoform
1 [Equus caballus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|440902096|gb|ELR52939.1| TOX high mobility group box family member 4, partial [Bos grunniens
mutus]
Length = 625
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 153 EKYEKDIAAYRAKGKSEAGKKG 174
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|345780986|ref|XP_864251.2| PREDICTED: TOX high mobility group box family member 4 isoform 4
[Canis lupus familiaris]
Length = 596
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|426376300|ref|XP_004054942.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Gorilla gorilla gorilla]
Length = 595
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|403264241|ref|XP_003924398.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|350594950|ref|XP_003484009.1| PREDICTED: TOX high mobility group box family member 2-like,
partial [Sus scrofa]
Length = 360
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 113 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 172
Query: 610 AKEDYNEALKAYKESGGGQDSDD---GKTSKSKKPAK 643
AK++Y +AL AY+ S + S D K++++ PAK
Sbjct: 173 AKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 209
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 546 RKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDE 605
R+KKD NAPK+P SA++++ + RE I K+NP I FTE+ K E+WK +SS EK ++E
Sbjct: 544 RQKKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKISEIWKNLSSDEKKPFEE 603
Query: 606 KVNKAKEDYNE 616
+ K Y E
Sbjct: 604 EAAKLASKYKE 614
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|29748100|gb|AAH50091.1| TOX high mobility group box family member 4 [Mus musculus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|12656035|gb|AAK00713.1|AF228408_1 epidermal Langerhans cell protein LCP1 [Mus musculus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|207080322|ref|NP_001128875.1| DKFZP459D0119 protein [Pongo abelii]
gi|55731997|emb|CAH92707.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|296214431|ref|XP_002753819.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Callithrix jacchus]
Length = 598
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|52138631|ref|NP_775446.2| TOX high mobility group box family member 4 [Rattus norvegicus]
gi|51859412|gb|AAH81696.1| TOX high mobility group box family member 4 [Rattus norvegicus]
gi|149033679|gb|EDL88477.1| epidermal Langerhans cell protein LCP1 [Rattus norvegicus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|148710301|gb|EDL42247.1| RIKEN cDNA 5730589K01, isoform CRA_b [Mus musculus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|402875604|ref|XP_003901590.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Papio anubis]
gi|441667216|ref|XP_004091957.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Nomascus leucogenys]
Length = 595
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|7662274|ref|NP_055643.1| TOX high mobility group box family member 4 [Homo sapiens]
gi|426376296|ref|XP_004054940.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Gorilla gorilla gorilla]
gi|33112349|sp|O94842.1|TOX4_HUMAN RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|15489162|gb|AAH13689.1| TOX high mobility group box family member 4 [Homo sapiens]
gi|119586784|gb|EAW66380.1| chromosome 14 open reading frame 92, isoform CRA_a [Homo sapiens]
gi|167773919|gb|ABZ92394.1| TOX high mobility group box family member 4 [synthetic construct]
gi|168278709|dbj|BAG11234.1| TOX high mobility group box family member 4 [synthetic construct]
gi|190689707|gb|ACE86628.1| TOX high mobility group box family member 4 protein [synthetic
construct]
gi|190691069|gb|ACE87309.1| TOX high mobility group box family member 4 protein [synthetic
construct]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|426232810|ref|XP_004010413.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Ovis aries]
Length = 596
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S++EK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|197098022|ref|NP_001126876.1| TOX high mobility group box family member 4 [Pongo abelii]
gi|55733008|emb|CAH93190.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|348577217|ref|XP_003474381.1| PREDICTED: TOX high mobility group box family member 4-like [Cavia
porcellus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ K+ +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|335292597|ref|XP_003356765.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Sus scrofa]
Length = 597
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|297283989|ref|XP_001084652.2| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Macaca mulatta]
Length = 744
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + DA E + I EK R + + K+KKKD N P
Sbjct: 360 ATPSPSSSINEEDADEANR-----------AIGEK-RAAPDSGKKPKTPKKKKKKDPNEP 407
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K AK++Y
Sbjct: 408 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 467
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 468 LKALAAYRAS 477
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGEMWNNTAAGDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
+ K K K Y + + AY+ G
Sbjct: 143 PCERKAAKLKVKYEKGIAAYQAKG 166
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + EK KK +P ++F+E +KK E WKT+S+K+K ++++
Sbjct: 3 KGDPKKPRGKMSSYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKIY 78
>gi|403264243|ref|XP_003924399.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 598
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|395861628|ref|XP_003803083.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Otolemur garnettii]
Length = 620
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|355725665|gb|AES08630.1| TOX high mobility group box family member 4 [Mustela putorius furo]
Length = 324
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 221 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 280
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 281 AKKEYLKALAAYKD 294
>gi|281345558|gb|EFB21142.1| hypothetical protein PANDA_005620 [Ailuropoda melanoleuca]
Length = 504
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 310
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S G + + K +++ PAK
Sbjct: 311 AKKEYLKALAAYRASLVSKGSPEQSETKGTQANPPAK 347
>gi|149408124|ref|NP_955424.2| TOX high mobility group box family member 2 [Rattus norvegicus]
Length = 515
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 516 KKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
++E+S IS + R S + + K+KKKD N P+KP+SAY ++F D + IK
Sbjct: 208 QEEESDAHFKISGEKRPSTDPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 267
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE---SGGGQDSDD 632
NP +F +++K +W ++ ++K Y K AK++Y +AL AY+ S D +
Sbjct: 268 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSPPDQGE 327
Query: 633 GKTSKSKKPAK 643
K +++ PAK
Sbjct: 328 AKNAQANPPAK 338
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|33112344|sp|Q99PM1.1|TOX4_RAT RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|12656266|gb|AAK00807.1|AF267197_1 epidermal Langerhans cell protein LCP1 [Rattus norvegicus]
Length = 619
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|431898745|gb|ELK07122.1| TOX high mobility group box family member 4 [Pteropus alecto]
Length = 597
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 197 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 256
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 257 AKKEYLKALAAYKD 270
>gi|397466075|ref|XP_003804798.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Pan paniscus]
Length = 597
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|402875602|ref|XP_003901589.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Papio anubis]
gi|441667208|ref|XP_004091956.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Nomascus leucogenys]
Length = 598
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|363741488|ref|XP_417340.3| PREDICTED: TOX high mobility group box family member 2 [Gallus
gallus]
Length = 510
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W + ++K Y K
Sbjct: 243 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDGLGEEQKQAYKRKTEA 302
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S G D + K++++ P+K
Sbjct: 303 AKKEYLKALAAYRASLVSKGSADQGETKSAQANPPSK 339
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R KIK ++PG+S + AKK GE+W + S++EK
Sbjct: 82 GQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLSIGDTAKKLGEMWNSSSAEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y++ + AY+ G
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S KEK ++++
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAYKESGG 626
+ K Y +K Y G
Sbjct: 63 AKQDKVRYEREMKNYVPPKG 82
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|395861630|ref|XP_003803084.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Otolemur garnettii]
Length = 597
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|426241501|ref|XP_004014629.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Ovis aries]
Length = 464
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK---PAK 643
AK++Y +AL AY+ S + S D +KS + PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSAQVNPPAK 296
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 84 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 143
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 144 PYEKKAAKLKEKYEKDIAAYRAKG 167
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALK 619
K Y +K
Sbjct: 63 MAKADKARYEREMK 76
>gi|344253299|gb|EGW09403.1| TOX high mobility group box family member 2 [Cricetulus griseus]
Length = 473
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 516 KKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
++E+S IS + R S + + K+KKKD N P+KP+SAY ++F D + IK
Sbjct: 176 QEEESDAHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 235
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE---SGGGQDSDD 632
NP +F +++K +W ++ ++K Y K AK++Y +AL AY+ S D +
Sbjct: 236 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSPPDQGE 295
Query: 633 GKTSKSKKPAK 643
K +++ PAK
Sbjct: 296 AKNAQANPPAK 306
>gi|426376298|ref|XP_004054941.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Gorilla gorilla gorilla]
gi|194391264|dbj|BAG60750.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148696675|gb|EDL28622.1| mCG11166 [Mus musculus]
Length = 160
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 43 NAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 102
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY+ G + G
Sbjct: 103 EKYEKDIAAYRAKGKSEAGKKG 124
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIPAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAYKESGG 626
K Y +K Y + G
Sbjct: 63 MAKADKARYEREMKTYIPTKG 83
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|326669485|ref|XP_001922515.3| PREDICTED: TOX high mobility group box family member 3 [Danio
rerio]
Length = 590
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 495 SNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAP 554
+ P+P+ S + D EG + I EK R + + K+KKKD N P
Sbjct: 220 ATPSPSSSINEDDQEEGNR-----------VIGEK-RPAPDAGKKPKTPKKKKKKDPNEP 267
Query: 555 KKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDY 614
+KP+SAY ++F D + IK NP +F E++K +W + ++K Y K AK++Y
Sbjct: 268 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKSKTEAAKKEY 327
Query: 615 NEALKAYKES 624
+AL AY+ S
Sbjct: 328 LKALAAYRAS 337
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 108 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 167
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 168 PYEKKAAKLKEKYEKDIAAYRAKG 191
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 28 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 87
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 88 MAKADKARYEREMKTY 103
>gi|354493683|ref|XP_003508969.1| PREDICTED: TOX high mobility group box family member 2-like
[Cricetulus griseus]
Length = 523
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 516 KKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
++E+S IS + R S + + K+KKKD N P+KP+SAY ++F D + IK
Sbjct: 216 QEEESDAHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 275
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE---SGGGQDSDD 632
NP +F +++K +W ++ ++K Y K AK++Y +AL AY+ S D +
Sbjct: 276 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSPPDQGE 335
Query: 633 GKTSKSKKPAK 643
K +++ PAK
Sbjct: 336 AKNAQANPPAK 346
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY G + G
Sbjct: 153 EKYEKDIAAYCAKGKSEAGKKG 174
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ K+ +P ++F E +KK E WKT+S+KE +++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKRKHPDSSVNFVEFSKKCSERWKTMSAKENSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|351705938|gb|EHB08857.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 176
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K+K KD NAPK+P S + ++ ++ KIK ++PG+S ++AKK E+W ++ +K
Sbjct: 21 GEAKKKFKDPNAPKRPPSTFFLFCSEYCPKIKGEHPGLSIGDVAKKLEEMWNNAAADDKQ 80
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE+Y + + AY+ G
Sbjct: 81 PYEKKAAKLKENYEKDIAAYRAKG 104
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKH 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|431894409|gb|ELK04209.1| TOX high mobility group box family member 2 [Pteropus alecto]
Length = 503
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 222 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 281
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK---PAK 643
AK++Y +AL AY+ S + S D +KS + PAK
Sbjct: 282 AKKEYLKALAAYRASLVSKSSPDQGETKSTQVNPPAK 318
>gi|344248925|gb|EGW05029.1| hypothetical protein I79_015964 [Cricetulus griseus]
Length = 164
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K+K KD NAPK+P SA++ + ++ R K K ++PG+S ++AKK GE+W ++ +K
Sbjct: 33 GEPKKKFKDPNAPKRPPSAFL-FCSEYRPKTKGEHPGLSLGDVAKKLGEMWNNTAAGDKQ 91
Query: 602 EYDEKVNKAKEDYNEALKAYK 622
Y++K K KE Y + + AY+
Sbjct: 92 PYEKKAAKLKEQYEKDIAAYR 112
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGEPKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK + PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEPPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y++ + AY+ G
Sbjct: 143 PYEKKAAKLKEKYDKDIAAYRAKG 166
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNPGIS---FTEIAKKGGELWKTVSSKEKAEYD 604
K PKKP MS+Y + +E+ KK +P S F+E +KK E WKT+S+KEK +++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCQEEHKK-HPDASVNNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 605 EKVNKAKEDYNEALKAY 621
+ K Y +K Y
Sbjct: 62 DMAKADKAPYEREMKTY 78
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|395829018|ref|XP_003787658.1| PREDICTED: TOX high mobility group box family member 2 isoform 1
[Otolemur garnettii]
Length = 464
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK---PAK 643
AK++Y +AL AY+ S + S D +KS + PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSSPDQGETKSTQVNPPAK 296
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 34 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 93
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 94 PYEKKAAKLKEKYEKDIAAYRAKG 117
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|194389432|dbj|BAG61682.1| unnamed protein product [Homo sapiens]
Length = 595
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQIYKRKTEA 252
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP M +Y + RE+ KK +P ++F+E +KK E WKT+ +KEK ++++
Sbjct: 3 KGDPKKPRGKMYSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 IAKADKARYEREMKTY 78
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYK 622
E Y + + AY+
Sbjct: 153 EKYEKDIAAYR 163
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|67460596|sp|Q76IQ7.1|TOX2_RAT RecName: Full=TOX high mobility group box family member 2; AltName:
Full=Granulosa cell HMG box protein 1; Short=GCX-1
gi|38524409|dbj|BAD02336.1| granulosa cell HMG-box protein-1 [Rattus norvegicus]
Length = 473
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S D + K +++ PAK
Sbjct: 260 AKKEYLKALAAYRASLVSKSPPDQGEAKNAQANPPAK 296
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKTY 78
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 517 KEKSR-KTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
KEKS+ I ++K R ++ K+ +KKKD NAPK+P S + ++ ++ R KIK
Sbjct: 55 KEKSKFDEIAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSA 114
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKESG 625
NPGIS ++AKK GE+W +S EK Y K K E Y + + YK G
Sbjct: 115 NPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLXEKYEKDVADYKSKG 164
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|119586785|gb|EAW66381.1| chromosome 14 open reading frame 92, isoform CRA_b [Homo sapiens]
Length = 475
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 92 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 151
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 152 AKKEYLKALAAYKD 165
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K K
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 129
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + + AY G + G
Sbjct: 130 EKYEKDIAAYGAKGKSEAGKKG 151
>gi|149408148|ref|NP_001092269.1| TOX high mobility group box family member 2 [Mus musculus]
Length = 522
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 308
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S D + K +++ PAK
Sbjct: 309 AKKEYLKALAAYRASLVSKSPPDQGEAKNTQANPPAK 345
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W +S +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTASDDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDTAAYRAKG 166
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E++KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 168
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 169 LKEKYEKDVADYKSKG 184
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 92
Query: 616 EALKAY 621
+K Y
Sbjct: 93 REMKDY 98
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+ +SAYM + N+ R+ ++++NPGISF ++ K GE WK ++ K++ Y+E K
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAK 79
Query: 610 AKEDYNE 616
K+ Y E
Sbjct: 80 DKKRYEE 86
>gi|149043014|gb|EDL96588.1| rCG32324 [Rattus norvegicus]
Length = 386
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 102 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 161
Query: 610 AKEDYNEALKAYKE---SGGGQDSDDGKTSKSKKPAK 643
AK++Y +AL AY+ S D + K +++ PAK
Sbjct: 162 AKKEYLKALAAYRASLVSKSPPDQGEAKNAQANPPAK 198
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 48 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 107
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 108 PYEKKAAKLKEKYEKDIAAYRAKG 131
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 89 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 148
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 149 PYEKKAAKLKEKYEKDIAAYRAKG 172
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K +
Sbjct: 63 MAKADKARYEREMKTW 78
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 559 SAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNE 616
SAY + RE+ KK NP ++F E +KK E WKTVS KEK+++DE K Y+
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRYDR 73
Query: 617 ALKAY 621
+K Y
Sbjct: 74 EMKDY 78
>gi|12860414|dbj|BAB31949.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 65 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 124
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 125 AKKEYLKALAAYKD 138
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSKEKAEYDEK 606
KKD N PK+P SA+ ++ + R++ K++NP + + + + K GGE WK++S EKA Y+ K
Sbjct: 49 KKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAK 108
Query: 607 VNKAKEDYNEALKAYKESGGGQDSDDGKTSKSK 639
K K +Y + ++AY +DD ++ +SK
Sbjct: 109 AAKRKAEYEKLMRAYDSKKVASAADDEESERSK 141
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+E+DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCYD 72
Query: 616 EALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSDSDDD 675
+K Y + GG+ D + K+P + P K+KS +N S D
Sbjct: 73 REMKDYGPAKGGKKKKD--PNAPKRPPSGFFLFCSEFRP-KIKS-----TNPGISIGDVA 124
Query: 676 KKASSKRKRDSDEDSK---AKTKKKKEKSE 702
KK +D + + K K KEK E
Sbjct: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYE 154
>gi|335775966|gb|AEH58748.1| TOX high mobility group box family member-like protein, partial
[Equus caballus]
Length = 460
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 60 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 119
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 120 AKKEYLKALAAYKD 133
>gi|348564037|ref|XP_003467812.1| PREDICTED: TOX high mobility group box family member 2-like [Cavia
porcellus]
Length = 595
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 310
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSP 654
AK++Y +AL AY+ S SK P + ET ST +P
Sbjct: 311 AKKEYLKALAAYRAS-----------LVSKSPPDQGETKSTQANP 344
>gi|148682410|gb|EDL14357.1| mCG113708 [Mus musculus]
Length = 630
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY + F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 219 DPNEPQKPVSAYALLFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKAEA 278
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 547 KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KKKD NA K+P+S + ++ ++ R KIK NPGIS ++AKK GE+W S +EK Y K
Sbjct: 105 KKKDPNALKRPLSGFFLFCSEFRPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 164
Query: 607 VNKAKEDYNEALKAYKESGGGQDSDDGKT 635
KE Y + + YK S G DS G T
Sbjct: 165 AADLKEKYEKDVADYK-SKGKFDSAKGPT 192
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 539 SSGGSTKRKKK-DKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTV 595
+SG +T R + D PK MSAY + RE+ KK N ++F E +KK E KT+
Sbjct: 13 NSGNNTVRMAEGDHKKPKGKMSAYAFFAQTCREEHKKKNSEVPVNFVEFSKKCSEKRKTM 72
Query: 596 SSKEKAEYDEKVNKAKEDYNEALKAYKESGGGQDSD 631
S KEK + DE K Y++ +K GG+ D
Sbjct: 73 SGKEKTKSDEMAKVDKVHYDQEMKDNGPVEGGKKKD 108
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R KIK + PG+S + AKK GE+W + S++EK
Sbjct: 82 GQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGLSIGDTAKKLGEMWNSSSAEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y++ + AY+ G
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S KEK ++++
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
+ K Y +K Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
NAPK+P SA+ ++ ++ R KIK + PG+S + AKK GE+W S+KEK Y++K K K
Sbjct: 93 NAPKRPPSAFCLFCSENRPKIKIEYPGLSIGDTAKKLGEMWSEQSAKEKQPYEQKAAKLK 152
Query: 612 EDYNEALKAYKESGGGQDSDDG 633
E Y + AY+ G + G
Sbjct: 153 EKYEKDFAAYRVKGKSEAGKKG 174
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 554 PKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
P KP MS+Y + RE+ KK +P ++F EI+KK + WKT+S+KE +++++
Sbjct: 6 PIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFEDLAK 65
Query: 609 KAKEDYNEALKAY 621
K Y +K Y
Sbjct: 66 SDKACYYREMKNY 78
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 21/183 (11%)
Query: 444 SDDEKEPDAYLARVKREAAERDDED---DEDEDESTDEDFNPDQAESDVAEEYDSNPTPT 500
SD EK P Y+A+ ++ E + ++ +E ED D++ S+V +E D+
Sbjct: 458 SDSEKAP--YVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAE---- 511
Query: 501 DSDEDSDASEGTKKKKKEKSRKT-ITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMS 559
D E+ S K K ++R T +++++KP K K G + KD N PK+P S
Sbjct: 512 DGSEEVSESIMKGAKSKAETRSTKLSVTKKPAKGAK-----GAA-----KDPNKPKRPSS 561
Query: 560 AYMMWFNDMREKIKKDNP-GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEAL 618
A+ ++ D R K+++P S + K GGE WK++S EKA Y K +K K +Y + +
Sbjct: 562 AFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 621
Query: 619 KAY 621
KAY
Sbjct: 622 KAY 624
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 511 GTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMRE 570
G K K + +S K +++++KP K G K KD N PK+P SA+ ++ D RE
Sbjct: 380 GAKSKTETRSSK-LSVTKKPAKG-------AGRGKAAAKDPNKPKRPASAFFVFMEDFRE 431
Query: 571 KIKKDNP-GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
KK+NP S + K G+ WK++S EKA Y K K K +Y + +KAY
Sbjct: 432 TFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAY 483
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|327271511|ref|XP_003220531.1| PREDICTED: TOX high mobility group box family member 2-like [Anolis
carolinensis]
Length = 512
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 243 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 302
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
AK++Y +AL AY+ S + S D +KS +
Sbjct: 303 AKKEYLKALAAYRASLVSKSSADQGETKSPQ 333
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ + ++ R KIK ++PG+S ++AKK GE+W ++ K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFFFCSEYRPKIKGEHPGLSIGDVAKKLGEMWSNTAADAKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 550 DKNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYD 604
DK P KP MS+Y + RE+ KK +P ++F+E +KK E WKTVS+KEK +++
Sbjct: 2 DKGNPTKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTVSAKEKGKFE 61
Query: 605 EKVNKAKEDYNEALKAY 621
+ K Y +K Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++AKK GE+W +S +K +Y K K
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSDKQQYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVTDYKSKG 164
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 WEMKDY 78
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S +AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGNVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444724258|gb|ELW64868.1| High mobility group protein B1 [Tupaia chinensis]
Length = 140
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K K NA K+P SA+ ++ ++ R KIK ++PG+S +AKK GE+W ++ +K
Sbjct: 21 GETKKKFKGPNAAKRPPSAFFLFCSEYRPKIKGEHPGLSIGGVAKKLGEVWNNTAADDKQ 80
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY + G
Sbjct: 81 PYEKKPAKLKEKYEKDIAAYPDKG 104
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+ ++AKK GE+W ++ EK
Sbjct: 77 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLPIGDVAKKLGEMWINTAADEKQ 136
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 137 PYEKKAAKLKEKYEKDIAAYQAKG 160
>gi|67968838|dbj|BAE00776.1| unnamed protein product [Macaca fascicularis]
Length = 293
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 92 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 151
Query: 610 AKEDYNEALKAYKESGGGQ 628
AK++Y +AL AYK++ Q
Sbjct: 152 AKKEYLKALAAYKDNQECQ 170
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEMDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|348537344|ref|XP_003456155.1| PREDICTED: TOX high mobility group box family member 2-like,
partial [Oreochromis niloticus]
Length = 489
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 480 FNPDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKES 539
NP + S V +P+P S + + + ++++ IT ++P S+ K
Sbjct: 145 LNPQVSRSAVPH---GSPSPPGSKSATPSPSSSNQEEETDPHLKITGEKRP-SSEMMKPK 200
Query: 540 SGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKE 599
K+KKKD N P KP+SAY ++F D + IK NP +F +++K +W + ++
Sbjct: 201 PKPQKKKKKKDPNEPTKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDGLGEEQ 260
Query: 600 KAEYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKV 657
K Y K AK++Y +AL AY+ S + +D P + K ++ SPH +
Sbjct: 261 KQSYKRKTEAAKKEYLKALAAYRASLVSKTYND--------PVETKSAQTSQASPHMM 310
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W + +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVDDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ K +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKVDKARYEREMKTY 78
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W ++ EK
Sbjct: 83 GETKKKSKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDAAKKLGEMWNNTAADEKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYGAKG 166
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK +PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGKHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 553 APKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKE 612
APK+P SA+ ++ ++ R KIK ++PG+S + AKK GE+W S+K+K Y++K K KE
Sbjct: 94 APKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 613 DYNEALKAYKESG 625
Y + + AY+ G
Sbjct: 154 KYEKDIAAYRAKG 166
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS Y + RE+ KK +P ++F E +KK E WKT+S+KEK+++++
Sbjct: 3 KGDPNKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y+ +K Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ D R KIK +NPG+S +IAKK GE+W + S++ K
Sbjct: 82 GEKKKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLSIGDIAKKLGEMWNSSSAEVKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y++ + Y+ G
Sbjct: 142 PYEKKAAKLKEKYDKDIALYRTKG 165
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
+ K Y +K Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G K++ KD NAPK+P SA+ ++ ++R K+K +NPG++ + AKK GE+W + +++EK
Sbjct: 82 GHKKKRFKDPNAPKRPPSAFFLFCAELRPKVKSENPGLTIGDTAKKLGEMWNSKTAEEKQ 141
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDGKTS 636
Y++K K KE Y++ + AY+ + G DS+ T+
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYR-TKGKVDSESAATA 175
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 549 KDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KD P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S KEK ++++
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 607 VNKAKEDYNEALKAY 621
+ K Y +K Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|395505268|ref|XP_003756965.1| PREDICTED: TOX high mobility group box family member 2-like
[Sarcophilus harrisii]
Length = 516
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 243 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 302
Query: 610 AKEDYNEALKAYKESGGGQDS---DDGKTSKSKKPAK 643
AK++Y +AL AY+ S + S + KT+ P+K
Sbjct: 303 AKKEYLKALAAYRASLVSKSSAEQTEAKTTPPNPPSK 339
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYD 604
KRK KD NAPK+P SA+ ++ ++ R K+K D+PG+ EIAK+ GE+W ++ + K+ Y+
Sbjct: 84 KRKTKDPNAPKRPPSAFFVFCSEHRPKVKADHPGLGIGEIAKRLGEMWGLLTPETKSPYE 143
Query: 605 EKVNKAKEDYNEALKAYKESGGGQDS 630
+K K KE Y + + AY+ G S
Sbjct: 144 KKAAKLKEKYEKDVAAYRGKGKAAPS 169
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K P KP MS+Y + RE+ KK +P ++F E +KK E WKT+S KEKA ++E
Sbjct: 3 KGEPGKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEE 62
Query: 606 KVNKAKEDYNEALKAYKESGGGQDSDD 632
K Y+ +K Y G + + D
Sbjct: 63 MAKADKARYDREMKNYVPPKGKRKTKD 89
>gi|334310875|ref|XP_001381305.2| PREDICTED: TOX high mobility group box family member 2-like
[Monodelphis domestica]
Length = 517
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 243 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 302
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKP 641
AK++Y +AL AY+ S + S + +K +P
Sbjct: 303 AKKEYLKALAAYRASLVSKSSAEQNEAKPPQP 334
>gi|194381494|dbj|BAG58701.1| unnamed protein product [Homo sapiens]
Length = 549
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F E++K +W ++ ++K Y K
Sbjct: 147 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 206
Query: 610 AKEDYNEALKAYKE 623
AK++Y +AL AYK+
Sbjct: 207 AKKEYLKALAAYKD 220
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK G++W ++ +K
Sbjct: 83 GETKKKLKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGKMWNNTAANDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESGGGQDSDDG 633
Y++K K KE Y + + AY+ G + G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKGKPNAAKKG 174
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 554 PKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
PKKP MS+ + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 6 PKKPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 609 KAKEDYNEALKAY 621
K Y +K Y
Sbjct: 66 VDKACYEREMKTY 78
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK G++W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 545 KRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSKEKAEY 603
KR KKD N PK+ SA+ ++ D R+ KK+NP + + + + K GG+ WK++S EKA Y
Sbjct: 44 KRAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPY 103
Query: 604 DEKVNKAKEDYNEALKAY 621
+EK K K +Y + + AY
Sbjct: 104 EEKAAKRKAEYEKLMDAY 121
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK G++W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK + PG+S + AKK GE W +SK+K +++K K
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAK 151
Query: 610 AKEDYNEALKAYKESGGGQDSDDGK 634
KE Y + + AY+ G SD GK
Sbjct: 152 LKEKYEKDVAAYRAKG---KSDVGK 173
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 548 KKDKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K D N P+ MS+Y + RE+ KK +P ++F E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKGDKVRYEREMKTY 78
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP ++++ ++ RE+ KK +P +SFTE +KK E WKT+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P SA+ ++ ++ R +IK + PG+S + AKK GE W +SK+K +++K K
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAK 151
Query: 610 AKEDYNEALKAYKESGGGQDSDDGK 634
KE Y + + AY+ G SD GK
Sbjct: 152 LKEKYEKDVAAYRAKG---KSDVGK 173
>gi|351704208|gb|EHB07127.1| TOX high mobility group box family member 2 [Heterocephalus glaber]
Length = 471
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%)
Query: 516 KKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKD 575
++E S IS + R S + + K+KKKD N P+KP+SAY ++F D + IK
Sbjct: 217 QEEDSEAHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 276
Query: 576 NPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKES 624
NP +F +++K +W ++ ++K Y K AK++Y +AL AY+ S
Sbjct: 277 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRAS 325
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
Query: 502 SDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAY 561
SD+D A T K+K + + + E P+K K++ K KD NAPK+P S+Y
Sbjct: 41 SDDDIRALSNTHKRKADVA---LDDDEAPKKRKRNA---------KPKDPNAPKRPASSY 88
Query: 562 MMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
+++ N++R+++K +P ++ E+ ++WK +S EKA Y + V AKE Y++ KAY
Sbjct: 89 ILFQNEIRKQLKDQHPELTNAELLNMISDIWKKMSEDEKATYHKLVEDAKERYSQDKKAY 148
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP +++Y ++ RE+ KK +P +SFTE +KK E W+T+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP +++Y ++ RE+ KK +P +SFTE +KK E WKT+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP +++Y ++ RE+ KK +P +SFTE +KK E WKT+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP +++Y ++ RE+ KK +P +SFTE +KK E WKT+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K +D NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEIWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 HYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y + +K Y
Sbjct: 63 MAKADKARYKKEMKTY 78
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K +D NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|389593823|ref|XP_003722160.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
gi|321438658|emb|CBZ12417.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
Length = 299
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query: 504 EDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSGGSTKRKKKDKNAPKKPMSAYMM 563
E DAS K+++ SR +KSKKDKES+ G K++KK + PK +S Y++
Sbjct: 76 EKEDASARRLKRERSPSR--------AKKSKKDKESARG--KKEKKPDDYPKGALSPYII 125
Query: 564 WFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAYKE 623
+ N+ REK+K +P + T++ + G LWK VS +EK+ Y + ++ K Y+ + AY
Sbjct: 126 FVNENREKLKAKHPDMKNTDLLSEMGNLWKKVSEEEKSRYQKLADEDKLRYDREMAAYIA 185
Query: 624 SGGG 627
GG
Sbjct: 186 RGGA 189
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ +R KI+++ PG+S +IAKK GE W + S+EK Y+++ +K
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 610 AKEDYNEALKAYK 622
KE Y + + AY+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 547 KKKDKNAPKKP---MSAYMMWFNDMREKIKKDNPG--ISFTEIAKKGGELWKTVSSKEKA 601
K+K PKKP +++Y ++ RE+ KK +P +SFTE +KK E WKT+S+KEK+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 602 EYDEKVNKAKEDYNEALKAY 621
+++E + K+ Y +K Y
Sbjct: 74 KFEELSKEDKKRYESEMKDY 93
>gi|296221849|ref|XP_002756934.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 203
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD+NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 80 GETKKKFKDRNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWSNTAADDKQ 139
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE + + AY+ G
Sbjct: 140 PYEKKAAKLKEKCEKDIAAYRAKG 163
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R K+K NPGIS ++AKK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK G++W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSVGDVAKKLGQMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGEPKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|412986017|emb|CCO17217.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 530 PRKSKKDKES-SGG----STKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEI 584
P K K+ K + SGG S+ ++ KD N PK P YM + + REKI K+ PGISF E
Sbjct: 144 PSKKKQQKRTGSGGKSTTSSTKEMKDPNKPKGPQGPYMCFVSHNREKIVKEFPGISFGEC 203
Query: 585 AKKGGELWKTVSSKEKAEYDEKVNKAKEDYNEALKAY 621
KK G+ W+ +S K K Y+E K K+ Y + ++ Y
Sbjct: 204 GKKLGQRWQNLSEKGKEMYNEMAEKDKKRYEKEMEKY 240
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGI-SFTEIAKKGGELWKTVSSKEKAEYDEKVN 608
D N PK+P SA++++ + R+ K +NP + + + + K GGE WK++SS EKA Y+ K
Sbjct: 49 DPNKPKRPPSAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAA 108
Query: 609 KAKEDYNEALKAY-KESGGGQDSDDGKTSKS 638
K K +Y + +KAY K+ D D+ SKS
Sbjct: 109 KRKAEYEKLIKAYEKKQASSADDDESDKSKS 139
>gi|432102749|gb|ELK30228.1| TOX high mobility group box family member 2 [Myotis davidii]
Length = 359
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 116 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 175
Query: 610 AKEDYNEALKAYKESGGGQDSDD 632
AK++Y +AL AY+ S + S D
Sbjct: 176 AKKEYLKALAAYRASLVSKSSPD 198
>gi|432858167|ref|XP_004068825.1| PREDICTED: TOX high mobility group box family member 2-like
[Oryzias latipes]
Length = 582
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P KP+SAY ++F D + IK NP +F +++K +W + ++K Y K
Sbjct: 278 DPNEPTKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDGLGEEQKQSYKRKTEA 337
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIES 665
AK++Y +AL AY+ S + +D P + K + ++ SPH + + S
Sbjct: 338 AKKEYLKALAAYRASLVSKTYND--------PGETKGSQTSQASPHMMPGNPPLYS 385
>gi|326931738|ref|XP_003211982.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 2-like [Meleagris gallopavo]
Length = 487
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W + ++K Y K
Sbjct: 218 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDGLGEEQKQAYKRKTEA 277
Query: 610 AKEDYNEALKAYKESGGGQDSDDGKTSKSKK 640
AK++Y +AL AY+ S + S D +KS +
Sbjct: 278 AKKEYLKALAAYRASLVSKSSADQGETKSAQ 308
>gi|345790072|ref|XP_543004.3| PREDICTED: TOX high mobility group box family member 2 isoform 2
[Canis lupus familiaris]
Length = 507
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 302 AKKEYLKALAAYRAS 316
>gi|328791318|ref|XP_624018.3| PREDICTED: hypothetical protein LOC551624 [Apis mellifera]
Length = 642
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 482 PDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSG 541
P +S+ E ++N T ++ +DS G K S + + K++
Sbjct: 256 PSAIQSNTVPEPNNNTTTSEDSDDSTPHSGMITGIKRPSPEPTDVG------AKNQRKPK 309
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
K+KK+D N P+KP+SAY ++F D + IK NP SF E++K +W + ++ K
Sbjct: 310 SQKKKKKRDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDALDTEHKN 369
Query: 602 EYDEKVNKAKEDYNEALKAYKES 624
Y +K AK++Y +AL AY+ S
Sbjct: 370 VYKKKTEAAKKEYLQALAAYRAS 392
>gi|147903827|ref|NP_001086402.1| TOX high mobility group box family member 2 [Xenopus laevis]
gi|49522252|gb|AAH75237.1| MGC84449 protein [Xenopus laevis]
Length = 465
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 259
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 260 AKKEYLKALAAYRAS 274
>gi|331999961|ref|NP_001193618.1| TOX high mobility group box family member 2 isoform 2 [Bos taurus]
Length = 384
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 301
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 302 AKKEYLKALAAYRAS 316
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
TK+K KD NAPK+P SA+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K Y
Sbjct: 85 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSVGDVAKKLGEMWNNAAADDKQPY 144
Query: 604 DEKVNKAKEDYNEALKAYKESG 625
++K K KE Y + + AY+ G
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|355725658|gb|AES08628.1| TOX high mobility group box family member 2 [Mustela putorius furo]
Length = 316
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D N P+KP+SAY ++F D + IK NP +F +++K +W ++ ++K Y K
Sbjct: 63 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEA 122
Query: 610 AKEDYNEALKAYKES 624
AK++Y +AL AY+ S
Sbjct: 123 AKKEYLKALAAYRAS 137
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
G TK+K KD NAPK+P A+ ++ ++ R KIK ++PG+S ++AKK GE+W ++ +K
Sbjct: 83 GETKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 142
Query: 602 EYDEKVNKAKEDYNEALKAYKESG 625
Y++K K KE Y + + AY+ G
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKG 166
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 551 KNAPKKP---MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE 605
K PKKP MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 606 KVNKAKEDYNEALKAY 621
K Y +K Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK PGI+ ++AKK GE+W +S EK Y KV K
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGITIGDVAKKLGEMWNNLSDSEKQPYITKVAK 167
Query: 610 AKEDYNEALKAYKESG 625
KE + + + YK G
Sbjct: 168 LKEKHEKDVADYKSKG 183
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDE--KVNKAKED 613
MSAY + +E+ KK NP ++F E +KK E WKT+S KEK+++DE KV+K D
Sbjct: 32 MSAYAFFVQTCKEEHKKKNPKVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKVDKVCHD 91
>gi|350412641|ref|XP_003489714.1| PREDICTED: hypothetical protein LOC100747449 [Bombus impatiens]
Length = 653
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 482 PDQAESDVAEEYDSNPTPTDSDEDSDASEGTKKKKKEKSRKTITISEKPRKSKKDKESSG 541
P +S E ++N T ++ +DS G K S + ++ K++
Sbjct: 260 PSAIQSSTIPEANNNTTTSEDSDDSTPHSGMITGIKRPSPEPTDVA------AKNQRKPK 313
Query: 542 GSTKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKA 601
K+KK+D N P+KP+SAY ++F D + IK NP SF E++K +W + ++ K
Sbjct: 314 SQKKKKKRDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDALETEHKN 373
Query: 602 EYDEKVNKAKEDYNEALKAYKES 624
Y +K AK++Y +AL AY+ S
Sbjct: 374 VYKKKTEAAKKEYLQALAAYRAS 396
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 547 KKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEK 606
KKKD NA K+P+S + ++ ++ KIK NPGIS ++AKK GE+W S +EK Y K
Sbjct: 85 KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 144
Query: 607 VNKAKEDYNEALKAYKESGGGQDSDDGKT 635
KE Y + + YK S G DS G T
Sbjct: 145 AADLKEKYEKDVADYK-SKGKFDSAKGPT 172
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKV 607
D PK MSAY + RE+ KK NP ++F E +KK E KT+S KEK ++DE
Sbjct: 5 DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 64
Query: 608 NKAKEDYNEALKAYKESGGGQDSD 631
K Y++ +K GG+ D
Sbjct: 65 KVDKVHYDQEMKDNGPVEGGKKKD 88
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%)
Query: 544 TKRKKKDKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEY 603
TK+K KD NAPK+P SA+ ++ + R KIK ++PG+S ++AKK GE+W ++ +K Y
Sbjct: 85 TKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLSIGDVAKKRGEMWNNTAADDKQPY 144
Query: 604 DEKVNKAKEDYNEALKAYKESG 625
++K K KE Y + + AY+ G
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKG 166
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MS+Y + RE+ KK +P ++F+E +KK E WKT+S+KEK ++++ K Y
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAIADKARYE 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKTY 78
>gi|410912242|ref|XP_003969599.1| PREDICTED: TOX high mobility group box family member 3-like
[Takifugu rubripes]
Length = 557
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 552 NAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAK 611
N P+KP+SAY ++F D + IK NP +F E++K +W + ++K Y K AK
Sbjct: 257 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKSKTEAAK 316
Query: 612 EDYNEALKAYKESGGGQDSDDGKTSKSKKPAKKKETASTAVSPHKVKSKEFIESNGSSSD 671
++Y +AL AY+ S + + + +++ + + ++ AST++SP V + SS
Sbjct: 317 KEYLKALAAYRASLVSKAAAESAEAQTIR-SVQQTLASTSLSPGLVLPSPLNQHPSMSSA 375
Query: 672 SDDDKKA 678
S ++A
Sbjct: 376 SQALQQA 382
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 550 DKNAPKKPMSAYMMWFNDMREKIKKDNPGISFTEIAKKGGELWKTVSSKEKAEYDEKVNK 609
D NAPK+P S + ++ ++ R KIK NPGIS ++ KK GE+W ++ EK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVPKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 610 AKEDYNEALKAYKESG 625
KE Y + + YK G
Sbjct: 149 LKEKYEKDVADYKSKG 164
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 558 MSAYMMWFNDMREKIKKDNP--GISFTEIAKKGGELWKTVSSKEKAEYDEKVNKAKEDYN 615
MSAY + RE+ KK NP ++F E +KK E WKT+S KEK+++DE K Y+
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 616 EALKAY 621
+K Y
Sbjct: 73 REMKDY 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.128 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,475,155,939
Number of Sequences: 23463169
Number of extensions: 579437082
Number of successful extensions: 8826704
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 30640
Number of HSP's successfully gapped in prelim test: 85581
Number of HSP's that attempted gapping in prelim test: 5014292
Number of HSP's gapped (non-prelim): 1622460
length of query: 764
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 613
effective length of database: 8,816,256,848
effective search space: 5404365447824
effective search space used: 5404365447824
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 81 (35.8 bits)