RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2634
         (749 letters)



>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27
           Methyltransferase {Paramecium bursaria chlorella virus
           1, PBCV-1 [TaxId: 10506]}
          Length = 119

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 695 NHSCVPNAEIKFPYSNFVLNMVATRDIASGDEICISYMDEDLLERGREKRN 745
           NHS  PNA  +       + +   + IA G+EI ISY D+  L R R  +N
Sbjct: 69  NHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLSRPRLTQN 119


>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast
           (Schizosaccharomyces pombe) [TaxId: 4896]}
          Length = 269

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 6/47 (12%)

Query: 695 NHSCVPNAEIKFPYSN------FVLNMVATRDIASGDEICISYMDED 735
           NHSC PN  I     N      + L   A +DI   +E+   Y    
Sbjct: 217 NHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAK 263


>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden
           pea (Pisum sativum) [TaxId: 3888]}
          Length = 261

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 9/67 (13%)

Query: 677 CEFLNNEGSALYKLQSSSNHSCVPNAEI---------KFPYSNFVLNMVATRDIASGDEI 727
              L NE   +  +    NHS     E               +++ ++ +   + +G+++
Sbjct: 175 FSRLRNENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQV 234

Query: 728 CISYMDE 734
            I Y   
Sbjct: 235 YIQYDLN 241


>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific
           methyltransferase SET7/9 catalytic domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 171

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 3/43 (6%)

Query: 695 NHSCVPNAE---IKFPYSNFVLNMVATRDIASGDEICISYMDE 734
           NHS  PN        P    +  +   R + + +E+ ++Y  +
Sbjct: 103 NHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYD 145


>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId:
           5141]}
          Length = 284

 Score = 34.9 bits (79), Expect = 0.029
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 695 NHSCVPNAEIKFPYSNFV------LNMVATRDIASGDEICISYMDE 734
           NHSC PN  I     +        L + A +DI  G E+   Y++ 
Sbjct: 217 NHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNG 262


>d1wd3a1 b.29.1.21 (A:19-337) Alpha-L-arabinofuranosidase B,
           N-terminal domain {Aspergillus kawachii [TaxId: 40384]}
          Length = 319

 Score = 29.0 bits (65), Expect = 2.3
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 438 SCDSTSSMNTLGMGSIAN--SLNKISGGSMQTLRKIFSGS-NDNKLTCANDGVAMKPASQ 494
           S D+T++++ L  G IA+  + +     +   +  I+  S N N LT A  G    P + 
Sbjct: 38  SDDTTTTISPLTAGGIADASAQDTFCANTTCLITIIYDQSGNGNHLTQAPPGGFDGPDTD 97

Query: 495 SSDNLAKSAGTS 506
             DNLA + G  
Sbjct: 98  GYDNLASAIGAP 109


>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258
           {Agrobacterium tumefaciens [TaxId: 358]}
          Length = 137

 Score = 27.5 bits (60), Expect = 3.4
 Identities = 9/86 (10%), Positives = 21/86 (24%), Gaps = 11/86 (12%)

Query: 102 PWPDAMAVYVSSQVHGQDERGRMMRRTIMRYVCVCITMVLANISPRVKKRFPSLDHFVEV 161
            W     ++V   + GQ    +++                 +       R      F ++
Sbjct: 59  GWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKI 118

Query: 162 GLLLENEKNIISAINDKFPGPPKHWM 187
           G           ++     G    W+
Sbjct: 119 G-----------SLGPLSSGQSITWL 133


>d1h3ga1 b.1.18.2 (A:3-95) Cyclomaltodextrinase, N-terminal domain
           {Flavobacterium sp. 92 [TaxId: 197856]}
          Length = 93

 Score = 25.8 bits (57), Expect = 6.4
 Identities = 6/30 (20%), Positives = 10/30 (33%)

Query: 378 NIAVDACQVEYTNPTSVKVEGSNNPNYALL 407
           +I      ++Y     V      N NY  +
Sbjct: 29  DIGRMEAALDYPGVRLVSTTRVPNANYLFV 58


>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId:
           5693]}
          Length = 298

 Score = 26.8 bits (58), Expect = 9.2
 Identities = 9/75 (12%), Positives = 14/75 (18%), Gaps = 4/75 (5%)

Query: 74  SNLIPLSFVLGFYISIIMTRWWDQYNNIP----WPDAMAVYVSSQVHGQDERGRMMRRTI 129
               P     G   S    R   +           D+          G+   G   R+ +
Sbjct: 99  RGAFPFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLQDGRVHSGTPFRQLL 158

Query: 130 MRYVCVCITMVLANI 144
                     V    
Sbjct: 159 EESSFSGKRFVEFAC 173


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0435    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,798,277
Number of extensions: 132696
Number of successful extensions: 339
Number of sequences better than 10.0: 1
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 13
Length of query: 749
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 657
Effective length of database: 1,144,436
Effective search space: 751894452
Effective search space used: 751894452
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.1 bits)