BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2636
(335 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49870|HR38_BOMMO Probable nuclear hormone receptor HR38 (Fragment) OS=Bombyx mori
GN=HR38 PE=2 SV=1
Length = 360
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 230/318 (72%), Gaps = 49/318 (15%)
Query: 23 ASSSPGCDTS-----RPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKY 77
SSSPG + R P SPSQLCAVCGD AACQHYGVRTCEGCKGFFKRTVQKGSKY
Sbjct: 1 GSSSPGVAPADNTGPRAAPSSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKY 60
Query: 78 VCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPP 137
VCLA+K+CPVDKRRRNRCQFC FQKCL VGMVKEVVRTDSLKGRRGRLPSKPK PQESPP
Sbjct: 61 VCLAEKSCPVDKRRRNRCQFCWFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKCPQESPP 120
Query: 138 SPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQE 197
SPP+SLITAL +R D P F++L
Sbjct: 121 SPPISLITAL------------------------------VRAHVDTSPDFANLDYSQ-- 148
Query: 198 LLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQ 257
YREP+PLEPP+++ E IQQFYSLLTTS+D+I+ FA+K+PG+ DLC ED+
Sbjct: 149 -----------YREPSPLEPPMSDLEVIQQFYSLLTTSIDMIKLFAEKVPGYGDLCPEDR 197
Query: 258 ELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLH 317
E LF SA LELFVLRLAYRT EDTKL F NG VL+K+QCQRSFG DWL+A+L+F + +
Sbjct: 198 EQLFASARLELFVLRLAYRTALEDTKLTFSNGSVLDKRQCQRSFG-DWLHAVLDFSNTSY 256
Query: 318 LMEIDISAFACLCALTLI 335
M+IDIS FACLCALTLI
Sbjct: 257 SMDIDISTFACLCALTLI 274
>sp|P49869|HR38_DROME Probable nuclear hormone receptor HR38 OS=Drosophila melanogaster
GN=Hr38 PE=1 SV=3
Length = 1073
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/298 (66%), Positives = 216/298 (72%), Gaps = 49/298 (16%)
Query: 38 SPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQF 97
+PSQLCAVCGD AACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADK CPVDKRRRNRCQF
Sbjct: 739 APSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQF 798
Query: 98 CRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPP 157
CRFQKCL VGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPP+SLITAL
Sbjct: 799 CRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITAL---------- 848
Query: 158 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEP 217
+R D P S L E E
Sbjct: 849 --------------------VRSHVDTTPDPSCLDYSHYE------------------EQ 870
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
++E +K+QQFY LLT+SVDVI+ FA+KIPG+ DL EDQELLFQSASLELFVLRLAYR
Sbjct: 871 SMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRA 930
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
R +DTKLIFCNG VL + QC RSFG +WLN I+EF +SLH +EIDISAFACLCALTLI
Sbjct: 931 RIDDTKLIFCNGTVLHRTQCLRSFG-EWLNDIMEFSRSLHNLEIDISAFACLCALTLI 987
>sp|Q04913|NR4A1_XENLA Nuclear receptor subfamily 4 group A member 1 OS=Xenopus laevis
GN=nr4a1 PE=2 SV=1
Length = 577
Score = 307 bits (786), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 196/301 (65%), Gaps = 47/301 (15%)
Query: 35 TPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNR 94
+P S CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVDKRRRNR
Sbjct: 238 SPSSNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNR 297
Query: 95 CQFCRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPL 154
CQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKPK ES P V LI +L
Sbjct: 298 CQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKQIAESSP---VDLINSL------- 347
Query: 155 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNP 214
+R D IP S L ++E P
Sbjct: 348 -----------------------VRAHIDSIPSSSKLDYSK-------------FQETVP 371
Query: 215 LEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLA 274
L+ +QQFY LL+ S++VIR +A+KI GF DL KEDQ+LL +SA LELF+LRLA
Sbjct: 372 LQLEKESSVDVQQFYDLLSGSLEVIRKWAEKIQGFVDLPKEDQDLLLESAFLELFILRLA 431
Query: 275 YRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
YR+R E+ KLIFCNGVVL + QC R FG +W+++I+EF SL M ID+ +F+CL AL +
Sbjct: 432 YRSRPEEGKLIFCNGVVLHRTQCVRGFG-EWIDSIIEFSHSLQRMNIDVPSFSCLSALVI 490
Query: 335 I 335
+
Sbjct: 491 V 491
>sp|Q0V8F0|NR4A1_BOVIN Nuclear receptor subfamily 4 group A member 1 OS=Bos taurus
GN=NR4A1 PE=2 SV=1
Length = 598
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/324 (52%), Positives = 208/324 (64%), Gaps = 59/324 (18%)
Query: 15 RHSAPLSSA---SSSPGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTV 71
R AP++SA S +PG R CAVCGD A+CQHYGVRTCEGCKGFFKRTV
Sbjct: 245 RLDAPVTSAKARSGAPGGSEGR---------CAVCGDNASCQHYGVRTCEGCKGFFKRTV 295
Query: 72 QKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKS 131
QK +KY+CLA+K CPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKPK
Sbjct: 296 QKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQ 355
Query: 132 PQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDL 191
P E+ P+ L+T+L +R D P S L
Sbjct: 356 PPETSPA---HLLTSL------------------------------VRAHLDSGPSTSKL 382
Query: 192 CKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSD 251
FQ +L F +E + +QQFY LL+ S++VIR +A+KIPGF++
Sbjct: 383 DYSK----FQELALPHFGKE---------DAGDVQQFYDLLSGSLEVIRKWAEKIPGFAE 429
Query: 252 LCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILE 311
L DQ+LL +SA LELF+LRLAYR++ + KLIFC+G+VL + QC R FG DW+++IL
Sbjct: 430 LSPGDQDLLLESAFLELFILRLAYRSKPAEGKLIFCSGLVLHRLQCARGFG-DWIDSILA 488
Query: 312 FCQSLHLMEIDISAFACLCALTLI 335
F +SLH + +DI AFACL AL LI
Sbjct: 489 FSRSLHSLVVDIPAFACLSALVLI 512
>sp|P12813|NR4A1_MOUSE Nuclear receptor subfamily 4 group A member 1 OS=Mus musculus
GN=Nr4a1 PE=2 SV=1
Length = 601
Score = 304 bits (778), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 194/293 (66%), Gaps = 47/293 (16%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
CAVCGD A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVDKRRRNRCQFCRFQK
Sbjct: 270 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQK 329
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
CL VGMVKEVVRTDSLKGRRGRLPSKPK P P + P +L+T+L
Sbjct: 330 CLAVGMVKEVVRTDSLKGRRGRLPSKPKQP---PDASPTNLLTSL--------------- 371
Query: 163 KIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEP 222
IR D P + L FQ L F +E +
Sbjct: 372 ---------------IRAHLDSGPSTAKLDYSK----FQELVLPRFGKE---------DA 403
Query: 223 EKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDT 282
+QQFY LL+ S+DVIR +A+KIPGF +LC DQ+LL +SA LELF+LRLAYR++ +
Sbjct: 404 GDVQQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQDLLLESAFLELFILRLAYRSKPGEG 463
Query: 283 KLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KLIFC+G+VL + QC R FG DW++ IL F +SLH + +D+ AFACL AL LI
Sbjct: 464 KLIFCSGLVLHQLQCARGFG-DWIDNILAFSRSLHSLGVDVPAFACLSALVLI 515
>sp|P51666|NR4A1_CANFA Nuclear receptor subfamily 4 group A member 1 OS=Canis familiaris
GN=NR4A1 PE=2 SV=1
Length = 598
Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/343 (51%), Positives = 213/343 (62%), Gaps = 56/343 (16%)
Query: 2 QLG-RSSSSESPKLRHSAPLSSASSSPG-------CDTSRPTPPSPSQ-LCAVCGDIAAC 52
QLG R S S S AP S PG +R PS S+ CAVCGD A+C
Sbjct: 217 QLGERESYSISTAFPGLAPTSPHLDGPGMLDAPVPSAKARSGAPSGSEGRCAVCGDNASC 276
Query: 53 QHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEV 112
QHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVDKRRRNRCQFCRFQKCL VGMVKEV
Sbjct: 277 QHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
Query: 113 VRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLT 172
VRTDSLKGRRGRLPSKPK P P + P +L+T+L
Sbjct: 337 VRTDSLKGRRGRLPSKPKQP---PDASPANLLTSL------------------------- 368
Query: 173 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLL 232
+R D P + L FQ L F +E + +QQFY LL
Sbjct: 369 -----VRAHLDSGPSTAKLDYSK----FQELVLPHFGKE---------DAGDVQQFYDLL 410
Query: 233 TTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVL 292
+ S++VIR +A+KIPGF++L DQ+LL +SA LELF+LRLAYR++ + KLIFC+G+VL
Sbjct: 411 SGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKLIFCSGLVL 470
Query: 293 EKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ QC R FG DW+++IL F +SLH + +D+ AFACL AL LI
Sbjct: 471 HRLQCARGFG-DWIDSILAFSRSLHGLVVDVPAFACLSALVLI 512
>sp|P22829|NR4A1_RAT Nuclear receptor subfamily 4 group A member 1 OS=Rattus norvegicus
GN=Nr4a1 PE=1 SV=2
Length = 597
Score = 301 bits (771), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 212/347 (61%), Gaps = 64/347 (18%)
Query: 2 QLGRSSSSESPKLRHSAPLSSASSSPGCDTS----RPTPPSPSQL---------CAVCGD 48
QLG S P +A A +SP CDTS P + ++ CAVCGD
Sbjct: 216 QLGEGESYSVP----AAFPGLAPTSPNCDTSGILDAPVTSTKARSGSSGGSEGRCAVCGD 271
Query: 49 IAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGM 108
A+CQHYGVRTCEGCKGFFKRTVQK +KY+CLA+K CPVDKRRRNRCQFCRFQKCL VGM
Sbjct: 272 NASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGM 331
Query: 109 VKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFY 168
VKEVVRTDSLKGRRGRLPSKPK P P + P +L+T+L
Sbjct: 332 VKEVVRTDSLKGRRGRLPSKPKQP---PDASPTNLLTSL--------------------- 367
Query: 169 SLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQF 228
IR D P + L FQ L F +E + +QQF
Sbjct: 368 ---------IRAHLDSGPNTAKLDYSK----FQELVLPRFGKE---------DAGDVQQF 405
Query: 229 YSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCN 288
Y LL+ S+DVIR +A+KIPGF +L DQ+LL +SA LELF+LRLAYR++ + KLIFC+
Sbjct: 406 YDLLSGSLDVIRKWAEKIPGFIELSPGDQDLLLESAFLELFILRLAYRSKPGEGKLIFCS 465
Query: 289 GVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
G+VL + QC R FG DW++ IL F +SLH + +D+ AFACL AL LI
Sbjct: 466 GLVLHRLQCARGFG-DWIDNILAFSRSLHSLGVDVPAFACLSALVLI 511
>sp|P22736|NR4A1_HUMAN Nuclear receptor subfamily 4 group A member 1 OS=Homo sapiens
GN=NR4A1 PE=1 SV=1
Length = 598
Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/325 (51%), Positives = 207/325 (63%), Gaps = 49/325 (15%)
Query: 11 SPKLRHSAPLSSASSSPGCDTSRPTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRT 70
SP L S L + +S + P CAVCGD A+CQHYGVRTCEGCKGFFKRT
Sbjct: 237 SPHLEGSGILDTPVTSTKARSGAPG--GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRT 294
Query: 71 VQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPK 130
VQK +KY+CLA+K CPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKPK
Sbjct: 295 VQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK 354
Query: 131 SPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSD 190
P P + P +L+T+L R P A+ + +F L V+ HF
Sbjct: 355 QP---PDASPANLLTSLVRAHLDSGPSTAKLD-YSKFQEL------VLPHFG-------- 396
Query: 191 LCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFS 250
KED +QQFY LL+ S++VIR +A+KIPGF+
Sbjct: 397 --KEDAG--------------------------DVQQFYDLLSGSLEVIRKWAEKIPGFA 428
Query: 251 DLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAIL 310
+L DQ+LL +SA LELF+LRLAYR++ + KLIFC+G+VL + QC R FG DW+++IL
Sbjct: 429 ELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFG-DWIDSIL 487
Query: 311 EFCQSLHLMEIDISAFACLCALTLI 335
F +SLH + +D+ AFACL AL LI
Sbjct: 488 AFSRSLHSLLVDVPAFACLSALVLI 512
>sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens
GN=NR4A3 PE=2 SV=3
Length = 626
Score = 292 bits (747), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 189/296 (63%), Gaps = 47/296 (15%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVDKRRRNRCQ+CRFQK
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQK 351
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
CL VGMVKEVVRTDSLKGRRGRLPSKPKSP L+ ++P
Sbjct: 352 CLSVGMVKEVVRTDSLKGRRGRLPSKPKSP---------------------LQQEPSQPS 390
Query: 163 KIQQFYSLLTTSVDVIRHFADKIP---GFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
++ ++R D P +S C DQ A
Sbjct: 391 PPSPPICMMNA---LVRALTDSTPRDLDYSRYCPTDQAAAGTDA---------------- 431
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELFVLRL+ R+
Sbjct: 432 ---EHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNT 488
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ K +FCNG+VL + QC R FG +WL++I +F +L + +DI A ACL AL++I
Sbjct: 489 AEDKFVFCNGLVLHRLQCLRGFG-EWLDSIKDFSLNLQSLNLDIQALACLSALSMI 543
>sp|Q9QZB6|NR4A3_MOUSE Nuclear receptor subfamily 4 group A member 3 OS=Mus musculus
GN=Nr4a3 PE=2 SV=1
Length = 627
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 189/296 (63%), Gaps = 47/296 (15%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVDKRRRNRCQ+CRFQK
Sbjct: 293 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQK 352
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
CL VGMVKEVVRTDSLKGRRGRLPSKPKSP L+ ++P
Sbjct: 353 CLSVGMVKEVVRTDSLKGRRGRLPSKPKSP---------------------LQQEPSQPS 391
Query: 163 KIQQFYSLLTTSVDVIRHFADKIP---GFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
++ ++R D P +S C DQ A
Sbjct: 392 PPSPPICMMNA---LVRALTDATPRDLDYSRYCPTDQATAGTDA---------------- 432
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELFVLRL+ R+
Sbjct: 433 ---EHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNT 489
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ K +FCNG+VL + QC R FG +WL++I +F +L + +DI A ACL AL++I
Sbjct: 490 AEDKFVFCNGLVLHRLQCLRGFG-EWLDSIKDFSLNLQSLNLDIQALACLSALSMI 544
>sp|P51179|NR4A3_RAT Nuclear receptor subfamily 4 group A member 3 OS=Rattus norvegicus
GN=Nr4a3 PE=2 SV=1
Length = 628
Score = 290 bits (743), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 189/296 (63%), Gaps = 47/296 (15%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
CAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLA+K CPVDKRRRNRCQ+CRFQK
Sbjct: 294 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQK 353
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
CL VGMVKEVVRTDSLKGRRGRLPSKPKSP L+ ++P
Sbjct: 354 CLSVGMVKEVVRTDSLKGRRGRLPSKPKSP---------------------LQQEPSQPS 392
Query: 163 KIQQFYSLLTTSVDVIRHFADKIP---GFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
++ ++R D P +S C DQ A
Sbjct: 393 PPSPPICMMNA---LVRALTDATPRDLDYSRYCPTDQATAGTDA---------------- 433
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
E +QQFY+LLT S+DV R +A+KIPGF+DL KEDQ LL +SA LELFVLRL+ R+
Sbjct: 434 ---EHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNT 490
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ K +FCNG+VL + QC R FG +WL++I +F +L + +DI A ACL AL++I
Sbjct: 491 AEDKFVFCNGLVLHRLQCLRGFG-EWLDSIKDFSLNLQSLNLDIQALACLSALSMI 545
>sp|P41829|NHR6_CAEEL Nuclear hormone receptor family member nhr-6 OS=Caenorhabditis
elegans GN=nhr-6 PE=2 SV=3
Length = 619
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 74/90 (82%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRF 100
++CAVC D A C HYG RTCEGCKGFFKRTVQK SKY C +K CP+DKR R+RCQ+CR+
Sbjct: 266 KMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRSRCQYCRY 325
Query: 101 QKCLQVGMVKEVVRTDSLKGRRGRLPSKPK 130
QKCL+VGMVKE+VR SL GRRGRL SK K
Sbjct: 326 QKCLEVGMVKEIVRHGSLSGRRGRLSSKTK 355
>sp|Q5RAM2|ERR3_PONAB Estrogen-related receptor gamma OS=Pongo abelii GN=ESRRG PE=2 SV=1
Length = 435
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 1 TQLGRSSSSESPKLRHSAPLSSASS-----SPGCDTSRPTPPS----------PSQLCAV 45
T G + +SP L SAP+ S C ++ P P +LC V
Sbjct: 48 TMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYMLNSMPKRLCLV 107
Query: 46 CGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQ 105
CGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ CRF KCL+
Sbjct: 108 CGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLK 167
Query: 106 VGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQ 165
VGM+KE VR D ++G GR K + E+ P L P + +P K
Sbjct: 168 VGMLKEGVRLDRVRG--GRQKYKRRIDAENSPY---------------LNPQLVQPAK-- 208
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKI 225
+ Y+ + + + V A E Y P+P P ++ + +
Sbjct: 209 KPYNKIVSHLLV-------------------------AEPEKIYAMPDPTVPD-SDIKAL 242
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
L + VI +A IPGFS L DQ L QSA +E+ +L + YR+ + + +L+
Sbjct: 243 TTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELV 302
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + ++++ Q + + D NAIL+ + M+++ F L A+ L
Sbjct: 303 YADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIAL 351
>sp|P62510|ERR3_RAT Estrogen-related receptor gamma OS=Rattus norvegicus GN=Esrrg PE=2
SV=1
Length = 458
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 1 TQLGRSSSSESPKLRHSAPLSSASS-----SPGCDTSRPTPPS----------PSQLCAV 45
T G + +SP L SAP+ S C ++ P P +LC V
Sbjct: 71 TMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYMLNSMPKRLCLV 130
Query: 46 CGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQ 105
CGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ CRF KCL+
Sbjct: 131 CGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLK 190
Query: 106 VGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQ 165
VGM+KE VR D ++G GR K + E+ P L P + +P K
Sbjct: 191 VGMLKEGVRLDRVRG--GRQKYKRRIDAENSPY---------------LNPQLVQPAK-- 231
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKI 225
+ Y+ + + + V A E Y P+P P ++ + +
Sbjct: 232 KPYNKIVSHLLV-------------------------AEPEKIYAMPDPTVPD-SDIKAL 265
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
L + VI +A IPGFS L DQ L QSA +E+ +L + YR+ + + +L+
Sbjct: 266 TTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELV 325
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + ++++ Q + + D NAIL+ + M+++ F L A+ L
Sbjct: 326 YADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIAL 374
>sp|P62509|ERR3_MOUSE Estrogen-related receptor gamma OS=Mus musculus GN=Esrrg PE=1 SV=1
Length = 458
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 1 TQLGRSSSSESPKLRHSAPLSSASS-----SPGCDTSRPTPPS----------PSQLCAV 45
T G + +SP L SAP+ S C ++ P P +LC V
Sbjct: 71 TMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYMLNSMPKRLCLV 130
Query: 46 CGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQ 105
CGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ CRF KCL+
Sbjct: 131 CGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLK 190
Query: 106 VGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQ 165
VGM+KE VR D ++G GR K + E+ P L P + +P K
Sbjct: 191 VGMLKEGVRLDRVRG--GRQKYKRRIDAENSPY---------------LNPQLVQPAK-- 231
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKI 225
+ Y+ + + + V A E Y P+P P ++ + +
Sbjct: 232 KPYNKIVSHLLV-------------------------AEPEKIYAMPDPTVPD-SDIKAL 265
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
L + VI +A IPGFS L DQ L QSA +E+ +L + YR+ + + +L+
Sbjct: 266 TTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELV 325
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + ++++ Q + + D NAIL+ + M+++ F L A+ L
Sbjct: 326 YADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIAL 374
>sp|P62508|ERR3_HUMAN Estrogen-related receptor gamma OS=Homo sapiens GN=ESRRG PE=1 SV=1
Length = 458
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 1 TQLGRSSSSESPKLRHSAPLSSASS-----SPGCDTSRPTPPS----------PSQLCAV 45
T G + +SP L SAP+ S C ++ P P +LC V
Sbjct: 71 TMNGHQNGLDSPPLYPSAPILGGSGPVRKLYDDCSSTIVEDPQTKCEYMLNSMPKRLCLV 130
Query: 46 CGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQ 105
CGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ CRF KCL+
Sbjct: 131 CGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLK 190
Query: 106 VGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQ 165
VGM+KE VR D ++G GR K + E+ P L P + +P K
Sbjct: 191 VGMLKEGVRLDRVRG--GRQKYKRRIDAENSPY---------------LNPQLVQPAK-- 231
Query: 166 QFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKI 225
+ Y+ + + + V A E Y P+P P ++ + +
Sbjct: 232 KPYNKIVSHLLV-------------------------AEPEKIYAMPDPTVPD-SDIKAL 265
Query: 226 QQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLI 285
L + VI +A IPGFS L DQ L QSA +E+ +L + YR+ + + +L+
Sbjct: 266 TTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELV 325
Query: 286 FCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + ++++ Q + + D NAIL+ + M+++ F L A+ L
Sbjct: 326 YADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIAL 374
>sp|A4IIG7|NR4A2_XENTR Nuclear receptor subfamily 4 group A member 2 OS=Xenopus tropicalis
GN=nr4a2 PE=2 SV=1
Length = 591
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGFS+L K+DQ+LLF+SA LELFVLRLAYR+
Sbjct: 392 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFSELHKQDQDLLFESAFLELFVLRLAYRSNPA 451
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I++F +LH M IDISAF+C+ AL +I
Sbjct: 452 EGKLIFCNGVVLNRLQCVRGFG-EWIDSIVDFSSNLHSMNIDISAFSCIAALAVI 505
>sp|O95718|ERR2_HUMAN Steroid hormone receptor ERR2 OS=Homo sapiens GN=ESRRB PE=1 SV=2
Length = 508
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 141/302 (46%), Gaps = 57/302 (18%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R K K +S SP +SL + PP
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGR----QKYKRRLDSESSPYLSL---------QISPPA 205
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLE-- 216
+P LT V L EP+ L
Sbjct: 206 KKP---------LTKIVSY-----------------------------LLVAEPDKLYAM 227
Query: 217 PPIAEPEKIQQFYSLLTTSVD----VIRHFADKIPGFSDLCKEDQELLFQSASLELFVLR 272
PP PE + + L D VI +A IPGFS L DQ L QSA +E+ +L
Sbjct: 228 PPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILILG 287
Query: 273 LAYRTRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCAL 332
+ YR+ D KL++ +++++ + + + AIL+ + ++++ F L AL
Sbjct: 288 IVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKAL 347
Query: 333 TL 334
L
Sbjct: 348 AL 349
>sp|Q61539|ERR2_MOUSE Steroid hormone receptor ERR2 OS=Mus musculus GN=Esrrb PE=1 SV=2
Length = 433
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 144/296 (48%), Gaps = 45/296 (15%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYNCPATNECEITKRRRKSCQAC 158
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R K K +S SP ++L P+ PP
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGR----QKYKRRLDSENSPYLNL---------PISPPA 205
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
+P LT V S+L +Q+ +L+ PN + P
Sbjct: 206 KKP---------LTKIV-------------SNLLGVEQD--------KLYAMPPNDI--P 233
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
+ + + L + + ++A IPGF L DQ L QSA +E+ +L + YR+
Sbjct: 234 EGDIKALTTLCELADRELVFLINWAKHIPGFPSLTLGDQMSLLQSAWMEILILGIVYRSL 293
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
D KL + +++++ + D AIL+ + ++++ F L AL L
Sbjct: 294 PYDDKLAYAEDYIMDEEHSRLVGLLDLYRAILQLVRRYKKLKVEKEEFMILKALAL 349
>sp|Q08E53|NR4A2_BOVIN Nuclear receptor subfamily 4 group A member 2 OS=Bos taurus
GN=NR4A2 PE=2 SV=1
Length = 598
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFTDLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFG-EWIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
>sp|Q06219|NR4A2_MOUSE Nuclear receptor subfamily 4 group A member 2 OS=Mus musculus
GN=Nr4a2 PE=1 SV=1
Length = 598
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFG-EWIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
>sp|P43354|NR4A2_HUMAN Nuclear receptor subfamily 4 group A member 2 OS=Homo sapiens
GN=NR4A2 PE=1 SV=1
Length = 598
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFG-EWIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
>sp|Q5R5Y4|NR4A2_PONAB Nuclear receptor subfamily 4 group A member 2 OS=Pongo abelii
GN=NR4A2 PE=2 SV=1
Length = 598
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFG-EWIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
>sp|Q07917|NR4A2_RAT Nuclear receptor subfamily 4 group A member 2 OS=Rattus norvegicus
GN=Nr4a2 PE=1 SV=3
Length = 598
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ + IQQFY LLT S+++IR +A+KIPGF+DL K DQ+LLF+SA LELFVLRLAYR+
Sbjct: 399 DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV 458
Query: 281 DTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ KLIFCNGVVL + QC R FG +W+++I+EF +L M IDISAF+C+ AL ++
Sbjct: 459 EGKLIFCNGVVLHRLQCVRGFG-EWIDSIVEFSSNLQNMNIDISAFSCIAALAMV 512
>sp|P11475|ERR2_RAT Steroid hormone receptor ERR2 OS=Rattus norvegicus GN=Esrrb PE=2
SV=1
Length = 433
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 141/296 (47%), Gaps = 45/296 (15%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGDIA+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R K K +S SP +SL + PP
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGR----QKYKRRLDSENSPYLSL---------QISPPA 205
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
+P LT V + L E +L Y P P + P
Sbjct: 206 KKP---------LTKIVSYL------------LVAEPDKL----------YAMP-PDDVP 233
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
+ + + L + + +A IPGFS+L DQ L QSA +E+ +L + YR+
Sbjct: 234 EGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGDQMSLLQSAWMEILILGIVYRSL 293
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
D KL + +++++ + + AIL+ + ++++ F L AL L
Sbjct: 294 PYDDKLAYAEDYIMDEEHSRLVGLLELYRAILQLVRRYKKLKVEKEEFVMLKALAL 349
>sp|P49883|ECR_MANSE Ecdysone receptor OS=Manduca sexta GN=EcR PE=2 SV=1
Length = 556
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 20 LSSASSSPGCDTSR--------PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTV 71
LS ASS GC T P P +LC VCGD A+ HY TCEGCKGFF+R+V
Sbjct: 116 LSPASSINGCSTDGEPRRQKKGPAPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSV 175
Query: 72 QKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVV----------RTDSLKGR 121
K + Y+C AC +D R +CQ CR +KCL VGM E V R +
Sbjct: 176 TKNAVYICKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPESTCKNKRREKEAQRE 235
Query: 122 RGRLP--------SKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTT 173
+ +LP P Q PP P + I + P L + E +++ L
Sbjct: 236 KDKLPVSTTTVDDHMPAIMQCDPPPPEAARIHEVV--PRFLTEKLMEQNRLKNVTPLSAN 293
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLT 233
+I G+ +ED + + Q+ LE E + +Q +
Sbjct: 294 QKSLIARLVWYQEGYEQPSEEDLKRVTQTWQLEEEEEEETDM--------PFRQITEMTI 345
Query: 234 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLE 293
+V +I FA +PGFS + + DQ L +++S E+ +LR+A R A ++F N
Sbjct: 346 LTVQLIVEFAKGLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAATDSVLFANNQAYT 405
Query: 294 KQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ +++ + +L FC+ ++ M +D +A L A+ +
Sbjct: 406 RDNYRKAGMSYVIEDLLHFCRCMYSMSMDNVHYALLTAIVIF 447
>sp|Q91250|ESR1_TAEGU Estrogen receptor OS=Taeniopygia guttata GN=ESR1 PE=2 SV=1
Length = 587
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 137/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 174 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 233
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D RRG K K +E S + R P P+
Sbjct: 234 LRKCYEVGMMKGGIRKD----RRGGRVMKQKRQREEQDSRNGEASSTELRAPTLWASPL- 288
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
V++H P S L E A L Y E +P P
Sbjct: 289 -----------------VVKHNKKNSPALS-LTAEQMVSALLEAEPPLVYSEYDP-NRPF 329
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 330 NEASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSME 389
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M + F CL ++ L+
Sbjct: 390 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATAARFRMMNLQGEEFVCLKSIILL 446
>sp|P06212|ESR1_CHICK Estrogen receptor OS=Gallus gallus GN=ESR1 PE=2 SV=1
Length = 589
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 176 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 235
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D RRG K K +E S + R P
Sbjct: 236 LRKCYEVGMMKGGIRKD----RRGGEMMKQKRQREEQDSRNGEASSTELRAPT------- 284
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
L TS V++H P S L E A + Y E +P P
Sbjct: 285 -----------LWTSPLVVKHNKKNSPALS-LTAEQMVSALLEAEPPIVYSEYDP-NRPF 331
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 332 NEASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSME 391
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M + F CL ++ L+
Sbjct: 392 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATAARFRMMNLQGEEFVCLKSIILL 448
>sp|Q5QJV7|ERR1_RAT Steroid hormone receptor ERR1 OS=Rattus norvegicus GN=Esrra PE=2
SV=2
Length = 422
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 134/296 (45%), Gaps = 37/296 (12%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R + +P+ P P + A+ P P
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVN 194
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
A ++ H P E Y P+P P
Sbjct: 195 A-----------------LVSHLLVVEP-------------------EKLYAMPDPASPD 218
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
P + L + V +A IPGFS L DQ + QS +E+ VL +A R+
Sbjct: 219 GHLP-AVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSL 277
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+L F +VL+++ + + D A+L+ + L + ++ + L AL L
Sbjct: 278 PLQDELAFAEDLVLDEEGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALAL 333
>sp|O08580|ERR1_MOUSE Steroid hormone receptor ERR1 OS=Mus musculus GN=Esrra PE=1 SV=4
Length = 422
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 134/296 (45%), Gaps = 37/296 (12%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R + +P+ P P + A+ P P
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVN 194
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
A ++ H P E Y P+P P
Sbjct: 195 A-----------------LVSHLLVVEP-------------------EKLYAMPDPASPD 218
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
P + L + V +A IPGFS L DQ + QS +E+ VL +A R+
Sbjct: 219 GHLP-AVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSL 277
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+L F +VL+++ + + D A+L+ + L + ++ + L AL L
Sbjct: 278 PLQDELAFAEDLVLDEEGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALAL 333
>sp|Q9QZJ5|ESR1_MESAU Estrogen receptor OS=Mesocricetus auratus GN=ESR1 PE=2 SV=1
Length = 595
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D GR + + + P + A P+PL
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDLEGRNDMGPSGDMRATNLWPSPL----- 296
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
VI+H P S L + A L Y E +P P
Sbjct: 297 -----------------VIKHTKKNSPALS-LTADQMVSALLDAEPPLIYSEYDP-SRPF 337
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 338 SEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLIWRSME 397
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M++ F CL ++ L+
Sbjct: 398 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSARFRMMDLQGEEFVCLKSIILL 454
>sp|Q6QMY5|ERR1_CANFA Steroid hormone receptor ERR1 OS=Canis familiaris GN=ESRRA PE=2
SV=1
Length = 422
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPK-SPQESPPSPPVSLITALYREPNPLEPP 157
RF KCL+VGM+KE VR D ++G R + +P+ P P S P +
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGSFPAGPLAV----------- 183
Query: 158 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEP 217
P K +L++ H P E Y P+P P
Sbjct: 184 AGGPRKTAPVNALVS-------HLLVVEP-------------------EKLYAMPDPAGP 217
Query: 218 PIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRT 277
P + L + V +A IPGFS L DQ + QS +E+ VL +A R+
Sbjct: 218 DGHLP-AVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRS 276
Query: 278 RAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAI-LEFCQSLHLMEIDISAFACLCALTL 334
+L F +VL+++ R+ G L A+ L+ + L + ++ + L AL L
Sbjct: 277 LPLQDELAFAEDLVLDEEGA-RAAGLGELGAVLLQLVRRLQALRLEREEYVLLKALAL 333
>sp|P11474|ERR1_HUMAN Steroid hormone receptor ERR1 OS=Homo sapiens GN=ESRRA PE=1 SV=3
Length = 423
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 36/296 (12%)
Query: 39 PSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFC 98
P +LC VCGD+A+ HYGV +CE CK FFKRT+Q +Y C A C + KRRR CQ C
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 99 RFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPI 158
RF KCL+VGM+KE VR D ++G R + +P+ P P + A+ P P+
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPV 194
Query: 159 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPP 218
++ H P E Y P+P P
Sbjct: 195 NA----------------LVSHLLVVEP-------------------EKLYAMPDPAGPD 219
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
P + L + V +A IPGFS L DQ + QS +E+ VL +A R+
Sbjct: 220 GHLP-AVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSL 278
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+L F +VL+++ + + + A+L+ + L + ++ + L AL L
Sbjct: 279 PLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALAL 334
>sp|P28701|RXRG_CHICK Retinoic acid receptor RXR-gamma OS=Gallus gallus GN=RXRG PE=2 SV=1
Length = 467
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 152/342 (44%), Gaps = 78/342 (22%)
Query: 3 LGRSSSSES----PKLRHSAPLSSASSSPGCDTSRPTPPSPSQLCAVCGDIAACQHYGVR 58
L SSSE P L ++ S+SPG +CA+CGD ++ +HYGV
Sbjct: 107 LNNVSSSEDIKPLPGLPGIGNMNYPSTSPGSLAK--------HICAICGDRSSGKHYGVY 158
Query: 59 TCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSL 118
+CEGCKGFFKRT++K Y C +K C +DKR+RNRCQ+CR+QKCL +GM +E V+ +
Sbjct: 159 SCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER- 217
Query: 119 KGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTS---- 174
+G R R ++ +S PV I LE +A K + + + T S
Sbjct: 218 QGSRERSENEAESTSGGSEDMPVERI---------LEAELAVEPKTEAYSDVNTESSTND 268
Query: 175 -VDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLT 233
V I H ADK Q ++L+
Sbjct: 269 PVTNICHAADK------------------------------------------QLFTLV- 285
Query: 234 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLE 293
+A +IP FSDL EDQ +L ++ EL + ++R+ + ++ G+ +
Sbjct: 286 -------EWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVH 338
Query: 294 KQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ + G + + E + M++D S CL A+ L
Sbjct: 339 RSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVL 380
>sp|P49884|ESR1_BOVIN Estrogen receptor OS=Bos taurus GN=ESR1 PE=1 SV=3
Length = 596
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 33/301 (10%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 183 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 242
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D RRG K K ++ ++ + R N PI
Sbjct: 243 LRKCYEVGMMKGGIRKD----RRGGRMLKHKRQRDDGEGRNEAVPSGDMRAANLWPSPI- 297
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE----LFYREPNPL 215
+I+H P S DQ + SA LE + Y E +P
Sbjct: 298 -----------------MIKHTKKNSPVLS--LTADQMI---SALLEAEPPIIYSEYDPT 335
Query: 216 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAY 275
P +E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +
Sbjct: 336 RP-FSEASMMGLLTNLADRELVHMINWAKRVPGFVDLALHDQVHLLECAWLEILMIGLVW 394
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTL 334
R+ KL+F ++L++ Q + G + + +L +M + F CL ++ L
Sbjct: 395 RSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIIL 454
Query: 335 I 335
+
Sbjct: 455 L 455
>sp|Q9W6B3|RARB_COTJA Retinoic acid receptor beta OS=Coturnix coturnix japonica GN=RARB
PE=2 SV=1
Length = 455
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 53/297 (17%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C ++K RNRCQ+CR QK
Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQK 147
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
C +VGM KE VR D + ++ + P+K +S + + + +T E
Sbjct: 148 CFEVGMSKESVRND--RNKKKKEPTKQESTENYEMTAELDDLT----------------E 189
Query: 163 KIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS----LELFYREPNPLEPP 218
KI++ + F LC+ + SA L+L +
Sbjct: 190 KIRKAHQ----------------ETFPSLCQLGKYTTNSSADHRVRLDLGLWD------- 226
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R
Sbjct: 227 --------KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYT 278
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E + F +G+ L + Q + + + F L +E+D + L A+ LI
Sbjct: 279 PEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLI 335
>sp|P06211|ESR1_RAT Estrogen receptor OS=Rattus norvegicus GN=Esr1 PE=1 SV=1
Length = 600
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 137/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 187 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 246
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D RRG K K ++ + R N P+
Sbjct: 247 LRKCYEVGMMKGGIRKD----RRGGRMLKHKRQRDDLEGRNEMGTSGDMRAANLWPSPL- 301
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
VI+H P S L + A L Y E +P P
Sbjct: 302 -----------------VIKHTKKNSPALS-LTADQMVSALLDAEPPLIYSEYDP-SRPF 342
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 343 SEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLVWRSME 402
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M + F CL ++ L+
Sbjct: 403 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILL 459
>sp|P22448|RARB_CHICK Retinoic acid receptor beta OS=Gallus gallus GN=RARB PE=2 SV=2
Length = 455
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 53/297 (17%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
C VC D ++ HYGV CEGCKGFF+R++QK Y C DK C ++K RNRCQ+CR QK
Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQK 147
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
C +VGM KE VR D + ++ + P+K +S + + + +T E
Sbjct: 148 CFEVGMSKESVRND--RNKKKKEPTKQESTENYEMTAELDDLT----------------E 189
Query: 163 KIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS----LELFYREPNPLEPP 218
KI++ + F LC+ + SA L+L +
Sbjct: 190 KIRKAHQ----------------ETFPSLCQLGKYTTNSSADHRVRLDLGLWD------- 226
Query: 219 IAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
+F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R
Sbjct: 227 --------KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYT 278
Query: 279 AEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E + F +G+ L + Q + + + F L +E+D + L A+ LI
Sbjct: 279 PEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLI 335
>sp|Q29040|ESR1_PIG Estrogen receptor OS=Sus scrofa GN=ESR1 PE=1 SV=1
Length = 595
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D GR + + + + P + + P+PL
Sbjct: 242 LRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRNEAVPPGDMRSANLWPSPL----- 296
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE----LFYREPNPL 215
+I+H P S DQ + SA LE + Y E +P
Sbjct: 297 -----------------LIKHTKKNSPVLS--LTADQMI---SALLEAEPPIIYSEYDPT 334
Query: 216 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAY 275
P ++E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +
Sbjct: 335 RP-LSEASMMGLLTNLADRELVHMINWAKRVPGFLDLSLHDQVHLLECAWLEILMIGLVW 393
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTL 334
R+ KL+F ++L++ Q + G + + +L +M + F CL ++ L
Sbjct: 394 RSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIIL 453
Query: 335 I 335
+
Sbjct: 454 L 454
>sp|P19785|ESR1_MOUSE Estrogen receptor OS=Mus musculus GN=Esr1 PE=1 SV=1
Length = 599
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 186 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 245
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D RRG K K ++ + R N P+
Sbjct: 246 LRKCYEVGMMKGGIRKD----RRGGRMLKHKRQRDDLEGRNEMGASGDMRAANLWPSPL- 300
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
VI+H P S L + A + Y E +P P
Sbjct: 301 -----------------VIKHTKKNSPALS-LTADQMVSALLDAEPPMIYSEYDP-SRPF 341
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 342 SEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVHLLECAWLEILMIGLVWRSME 401
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M + F CL ++ L+
Sbjct: 402 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILL 458
>sp|Q5I7G2|RXR_LYMST Retinoic acid receptor RXR OS=Lymnaea stagnalis GN=RXR PE=1 SV=1
Length = 436
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 152/342 (44%), Gaps = 75/342 (21%)
Query: 9 SESPKLRHSAPLSSASSSPGCDTS---RPTPPSPS-----------QLCAVCGDIAACQH 54
S P+ HS + S +SS G PT PSPS +CA+CGD A+ +H
Sbjct: 69 SPGPQQMHSPGMHSPTSSMGSPPMLCLSPTGPSPSPGLPHSSLHTKHICAICGDRASGKH 128
Query: 55 YGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVR 114
YGV +CEGCKGFFKRTV+K Y C DK C +DKR+RNRCQ+CR+ KCL +GM +E V+
Sbjct: 129 YGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAVQ 188
Query: 115 TDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTS 174
+ R R+ K ES T+ P+E I E E +
Sbjct: 189 EE-----RQRVKEKGDGEVES---------TSGANNDMPVEQ-ILEAE----------LA 223
Query: 175 VDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTT 234
VD KI + D K+ + Q+A +LF
Sbjct: 224 VD------PKIDTYIDAQKDPVTNICQAADKQLF-------------------------- 251
Query: 235 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEK 294
+ +A +IP F++L EDQ +L ++ EL + ++R+ ++ G+ + +
Sbjct: 252 ---TLVEWAKRIPHFTELPLEDQVILLRAGWNELLIAGFSHRSIMAKDGILLATGLHVHR 308
Query: 295 QQC-QRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
Q G + + E + M++D + CL A+ L
Sbjct: 309 SSAHQAGVGTIFDRVLTELVAKMREMKMDKTELGCLRAVVLF 350
>sp|P18516|RARG_NOTVI Retinoic acid receptor gamma OS=Notophthalmus viridescens GN=RARG
PE=2 SV=2
Length = 505
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 130/299 (43%), Gaps = 57/299 (19%)
Query: 43 CAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQK 102
C VC D ++ HYGV +CEGCKGFF+R++QK Y C DK C ++K RNRCQ+CR QK
Sbjct: 143 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQK 202
Query: 103 CLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPE 162
C +VGM KE VR D + ++T Y P +E I +
Sbjct: 203 CFEVGMSKEAVRNDR---------------NKKKKEIKEEVVTDSYEMPPEMEALIQKVS 247
Query: 163 KIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSAS------LELFYREPNPLE 216
K Q F LC+ + SA L L+++
Sbjct: 248 KAHQ-------------------ETFPSLCQLGKYTTNSSADHRVQLDLGLWHK------ 282
Query: 217 PPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYR 276
F L T + I FA ++PGF+ L DQ L ++A L++ +LR+ R
Sbjct: 283 -----------FSELATKCIIKIVEFAKRLPGFATLTIADQITLLKAACLDILMLRICTR 331
Query: 277 TRAEDTKLIFCNGVVLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
E + F +G+ L + Q + + + F + L +E+D + L A+ LI
Sbjct: 332 YTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAEQLLPLEMDDTETGLLSAICLI 390
>sp|O18473|ECR_HELVI Ecdysone receptor OS=Heliothis virescens GN=EcR PE=1 SV=1
Length = 576
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 149/344 (43%), Gaps = 41/344 (11%)
Query: 20 LSSASSSPGCDTSR--------PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTV 71
LS ASS GC T P P +LC VCGD A+ HY TCEGCKGFF+R+V
Sbjct: 132 LSPASSVNGCSTDGEARRQKKGPAPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSV 191
Query: 72 QKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVV----------RTDSLKGR 121
K + Y+C AC +D R +CQ CR +KCL VGM E V + +
Sbjct: 192 TKNAVYICKFGHACEMDIYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRKEKKAQRE 251
Query: 122 RGRLP--------SKPKSPQESPPSPPVSLITALYRE---PNPLEPPIAEPEKIQQFYSL 170
+ +LP P Q PP P + I + P L + E +++ L
Sbjct: 252 KDKLPVSTTTVDDHMPPIMQCDPPPPEAARILECVQHEVVPRFLNEKLMEQNRLKNVPPL 311
Query: 171 LTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYS 230
+I G+ +ED + + QS + P +Q
Sbjct: 312 TANQKSLIARLVWYQEGYEQPSEEDLKRVTQSDEDDEDSDMP------------FRQITE 359
Query: 231 LLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGV 290
+ +V +I FA +PGF+ + + DQ L ++ S E+ +LR+A R A ++F N
Sbjct: 360 MTILTVQLIVEFAKGLPGFAKISQSDQITLLKACSSEVMMLRVARRYDAATDSVLFANNQ 419
Query: 291 VLEKQQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
+ +++ + +L FC+ ++ M +D +A L A+ +
Sbjct: 420 AYTRDNYRKAGMAYVIEDLLHFCRCMYSMMMDNVHYALLTAIVI 463
>sp|P03372|ESR1_HUMAN Estrogen receptor OS=Homo sapiens GN=ESR1 PE=1 SV=2
Length = 595
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 137/297 (46%), Gaps = 25/297 (8%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D R GR+ + + V + R N P+
Sbjct: 242 LRKCYEVGMMKGGIRKDR---RGGRMLKHKRQRDDGEGRGEVGSAGDM-RAANLWPSPLM 297
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPI 219
+ +L T+ ++ D P + Y E +P P
Sbjct: 298 IKRSKKNSLALSLTADQMVSALLDAEP-------------------PILYSEYDPTRP-F 337
Query: 220 AEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRA 279
+E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +R+
Sbjct: 338 SEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSME 397
Query: 280 EDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
KL+F ++L++ Q + G + + +L +M + F CL ++ L+
Sbjct: 398 HPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILL 454
>sp|P49881|ECR_BOMMO Ecdysone receptor OS=Bombyx mori GN=EcR PE=2 SV=1
Length = 606
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 148/340 (43%), Gaps = 36/340 (10%)
Query: 20 LSSASSSPGC----DTSR----PTPPSPSQLCAVCGDIAACQHYGVRTCEGCKGFFKRTV 71
LS ASS GC D R P P +LC VCGD A+ HY TCEGCKGFF+R+V
Sbjct: 176 LSPASSINGCSADADARRQKKGPAPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSV 235
Query: 72 QKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKS 131
K + Y+C AC +D R +CQ CR +KCL VGM E V + K + + K K
Sbjct: 236 TKNAVYICKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVIQEPSKNKDRQRQKKDKG 295
Query: 132 -----------------PQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTTS 174
Q PP P + I + P L + E + + L
Sbjct: 296 ILLPVSTTTVEDHMPPIMQCDPPPPEAARIHEVV--PRYLSEKLMEQNRQKNIPPLSANQ 353
Query: 175 VDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLTT 234
+I G+ ED + + Q+ + E + P +Q +
Sbjct: 354 KSLIARLVWYQEGYEQPSDEDLKRVTQTWQSD---EEDEESDLP------FRQITEMTIL 404
Query: 235 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLEK 294
+V +I FA +PGFS + + DQ L +++S E+ +LR+A R A ++F N +
Sbjct: 405 TVQLIVEFAKGLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAASDSVLFANNKAYTR 464
Query: 295 QQCQRSFGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
++ + +L FC+ + M +D FA L A+ +
Sbjct: 465 DNYRQGGMAYVIEDLLHFCRCMFAMGMDNVHFALLTAIVI 504
>sp|Q53AD2|ESR1_FELCA Estrogen receptor OS=Felis catus GN=ESR1 PE=2 SV=1
Length = 595
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 33/301 (10%)
Query: 40 SQLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCR 99
++ CAVC D A+ HYGV +CEGCK FFKR++Q + Y+C A C +DK RR CQ CR
Sbjct: 182 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACR 241
Query: 100 FQKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIA 159
+KC +VGM+K +R D R GR+ + E V + R N P+
Sbjct: 242 LRKCYEVGMMKGGIRKDR---RGGRMLKHKRQRDEGEGRNEVG-SSGDVRASNLWPSPL- 296
Query: 160 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLE----LFYREPNPL 215
+I+H P S DQ + SA LE + Y + +P
Sbjct: 297 -----------------LIKHTKKNSPALS--LTADQMV---SALLEAEPPIIYSDYDP- 333
Query: 216 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAY 275
P +E + +L + + ++A ++PGF DL DQ L + A LE+ ++ L +
Sbjct: 334 SRPFSEASMMGLLTNLADRELVHMINWAKRVPGFVDLSLHDQVHLLECAWLEILMIGLVW 393
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRSFGD-DWLNAILEFCQSLHLMEIDISAFACLCALTL 334
R+ KL+F ++L++ Q + G + + +L +M + F CL ++ L
Sbjct: 394 RSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIIL 453
Query: 335 I 335
+
Sbjct: 454 L 454
>sp|Q0VC20|RXRG_BOVIN Retinoic acid receptor RXR-gamma OS=Bos taurus GN=RXRG PE=2 SV=1
Length = 463
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 66/300 (22%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRF 100
+CA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C +DKR+RNRCQ+CR+
Sbjct: 137 HICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRY 196
Query: 101 QKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAE 160
QKCL +GM +E V+ + + R R S+ + PV I LE +A
Sbjct: 197 QKCLVMGMKREAVQEERQRSRE-RAESEAECANSGHEDMPVERI---------LEAELAV 246
Query: 161 PEKIQQFYSLLTTS-----VDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPL 215
K + + + T + V I H ADK
Sbjct: 247 EPKTESYGDMNTENSTNDPVTNICHAADK------------------------------- 275
Query: 216 EPPIAEPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAY 275
Q ++L+ +A +IP FSDL EDQ +L ++ EL + ++
Sbjct: 276 -----------QLFTLV--------EWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSH 316
Query: 276 RTRAEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
R+ + ++ G+ + + + G + + E + M++D S CL A+ L
Sbjct: 317 RSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVL 376
>sp|P51129|RXRG_XENLA Retinoic acid receptor RXR-gamma OS=Xenopus laevis GN=rxrg PE=2
SV=1
Length = 470
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 60/298 (20%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRF 100
+CA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C K C +DKR+RNRCQ+CR+
Sbjct: 144 HICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDKRQRNRCQYCRY 203
Query: 101 QKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAE 160
QKCL +GM +E V+ + R S+ KS E+ + S E P+E I E
Sbjct: 204 QKCLAMGMKREAVQEE-------RQRSREKSDTEAESTSSTS-------EEMPVER-ILE 248
Query: 161 PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIA 220
E +VD KI F D A L PN P+
Sbjct: 249 AE----------LAVD------PKIEAFGD------------AGL------PNSTNDPVT 274
Query: 221 E--PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTR 278
+Q ++L+ +A +IP FSDL EDQ +L ++ EL + ++R+
Sbjct: 275 NICHAADKQLFTLV--------EWAKRIPYFSDLPLEDQVILLRAGWNELLIASFSHRSV 326
Query: 279 AEDTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ ++ G+ + + + G + + E + M++D S CL A+ L
Sbjct: 327 SVQDGILLATGLHVHRSSAHNAGVGSIFDRVLTELVSKMKDMDMDKSELGCLRAIVLF 384
>sp|P28705|RXRG_MOUSE Retinoic acid receptor RXR-gamma OS=Mus musculus GN=Rxrg PE=2 SV=2
Length = 463
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 56/295 (18%)
Query: 41 QLCAVCGDIAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRF 100
+CA+CGD ++ +HYGV +CEGCKGFFKRT++K Y C +K C +DKR+RNRCQ+CR+
Sbjct: 137 HICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRY 196
Query: 101 QKCLQVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAE 160
QKCL +GM +E V+ + + R R S+ + S PV I LE +A
Sbjct: 197 QKCLVMGMKREAVQEERQRSRE-RAESEAECASSSHEDMPVERI---------LEAELAV 246
Query: 161 PEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIA 220
K + + ++V D + +++C + LF
Sbjct: 247 EPKTESY-----GDMNVENSTNDPV---TNICHAADKQLF-------------------- 278
Query: 221 EPEKIQQFYSLLTTSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAE 280
+ +A +IP FSDL EDQ +L ++ EL + ++R+ +
Sbjct: 279 -----------------TLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV 321
Query: 281 DTKLIFCNGVVLEKQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTL 334
++ G+ + + + G + + E + M++D S CL A+ L
Sbjct: 322 QDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVL 376
>sp|P19793|RXRA_HUMAN Retinoic acid receptor RXR-alpha OS=Homo sapiens GN=RXRA PE=1 SV=1
Length = 462
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 69/343 (20%)
Query: 8 SSESPKLRHSAPLSSASSSP------GCDTSRPTPPSPS--------QLCAVCGDIAACQ 53
S+ SP+L S+P++ SSS G + P PS +CA+CGD ++ +
Sbjct: 88 STGSPQL--SSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGK 145
Query: 54 HYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLQVGMVKEVV 113
HYGV +CEGCKGFFKRTV+K Y C +K C +DKR+RNRCQ+CR+QKCL +GM +E V
Sbjct: 146 HYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAV 205
Query: 114 RTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALYREPNPLEPPIAEPEKIQQFYSLLTT 173
+ + +G+ + ++ ES T+ E P+E +I +
Sbjct: 206 QEERQRGK-----DRNENEVES---------TSSANEDMPVE-------RILE------- 237
Query: 174 SVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFYREPNPLEPPIAEPEKIQQFYSLLT 233
++L E + + A++ L PN I + Q F
Sbjct: 238 ---------------AELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLF----- 277
Query: 234 TSVDVIRHFADKIPGFSDLCKEDQELLFQSASLELFVLRLAYRTRAEDTKLIFCNGVVLE 293
+ +A +IP FS+L +DQ +L ++ EL + ++R+ A ++ G+ +
Sbjct: 278 ----TLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVH 333
Query: 294 KQQCQRS-FGDDWLNAILEFCQSLHLMEIDISAFACLCALTLI 335
+ + G + + E + M++D + CL A+ L
Sbjct: 334 RNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLF 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,304,076
Number of Sequences: 539616
Number of extensions: 5327383
Number of successful extensions: 24153
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 22698
Number of HSP's gapped (non-prelim): 1095
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)